Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 PIRSF PIRSF004692 1 331 6.5E-126 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 Pfam PF01380 SIS domain 55 182 1.9E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 Gene3D G3DSA:3.10.580.10 206 328 8.2E-37 T 14-10-2018 Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 Gene3D G3DSA:3.40.50.10490 8 205 5.4E-59 T 14-10-2018 Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 SUPERFAMILY SSF53697 29 331 1.18E-62 T 14-10-2018 Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 Pfam PF00571 CBS domain 275 327 2.2E-8 T 14-10-2018 IPR000644 CBS domain Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 Pfam PF00571 CBS domain 210 266 8.8E-6 T 14-10-2018 IPR000644 CBS domain Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 55 321 2.5E-91 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 SMART SM00116 282 330 1.8 T 14-10-2018 IPR000644 CBS domain Atu3774 f71ebc878299f9c4b649d123e3dfe223 331 SMART SM00116 219 267 2.5E-4 T 14-10-2018 IPR000644 CBS domain Atu2701 389f74a8972bcdcd56d99401428d1771 232 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 4 230 8.5E-79 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atu2701 389f74a8972bcdcd56d99401428d1771 232 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 221 7.8E-53 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atu2701 389f74a8972bcdcd56d99401428d1771 232 Gene3D G3DSA:1.10.1270.20 170 232 2.5E-28 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atu2701 389f74a8972bcdcd56d99401428d1771 232 PIRSF PIRSF000386 3 232 1.0E-90 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atu2701 389f74a8972bcdcd56d99401428d1771 232 Gene3D G3DSA:3.40.1280.10 1 168 5.9E-61 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu2701 389f74a8972bcdcd56d99401428d1771 232 SUPERFAMILY SSF75217 2 229 7.19E-92 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu2701 389f74a8972bcdcd56d99401428d1771 232 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 232 102.735 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 764 776 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 206 219 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 482 491 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 780 796 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 232 254 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 324 340 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 372 386 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 386 406 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR01159 DNA gyrase subunit B signature 191 206 1.0E-66 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 SUPERFAMILY SSF56719 406 803 1.12E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Gene3D G3DSA:3.30.565.10 12 232 2.9E-85 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 739 800 2.5E-26 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 SUPERFAMILY SSF55874 15 222 2.23E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 SUPERFAMILY SSF54211 233 403 1.88E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 811 101.64 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 SMART SM00433 45 606 9.5E-260 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Gene3D G3DSA:3.30.230.10 233 404 3.7E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Gene3D G3DSA:3.40.50.670 684 809 1.3E-23 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 811 1.1E-298 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Pfam PF01751 Toprim domain 431 543 1.4E-17 T 14-10-2018 IPR006171 TOPRIM domain Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Gene3D G3DSA:3.40.50.670 410 589 5.7E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 SMART SM00387 41 186 4.9E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 45 60 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 432 446 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 537 549 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 80 93 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 517 534 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 123 137 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 743 759 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 280 293 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 PRINTS PR00418 DNA topoisomerase II family signature 499 515 2.3E-71 T 14-10-2018 Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 181 4.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0012 92ba554f10a2c809e641b3ca82abe37b 811 Pfam PF00204 DNA gyrase B 233 402 1.4E-56 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu0290 d02ff3ed0ffcb638ba207fa251961e3e 122 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 33 120 4.7E-36 T 14-10-2018 IPR012997 Rare lipoprotein A Atu0290 d02ff3ed0ffcb638ba207fa251961e3e 122 Gene3D G3DSA:2.40.40.10 31 120 7.1E-33 T 14-10-2018 IPR036908 RlpA-like domain superfamily Atu0290 d02ff3ed0ffcb638ba207fa251961e3e 122 SUPERFAMILY SSF50685 24 120 1.15E-13 T 14-10-2018 IPR036908 RlpA-like domain superfamily Atu0290 d02ff3ed0ffcb638ba207fa251961e3e 122 Pfam PF03330 Lytic transglycolase 31 116 5.3E-26 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Atu0290 d02ff3ed0ffcb638ba207fa251961e3e 122 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 10 119 20.519 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Atu0620 1f973ab09f917be3a59b8db57f568bfd 246 Pfam PF01728 FtsJ-like methyltransferase 49 227 2.6E-50 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Atu0620 1f973ab09f917be3a59b8db57f568bfd 246 PIRSF PIRSF005461 15 238 2.6E-69 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Atu0620 1f973ab09f917be3a59b8db57f568bfd 246 SUPERFAMILY SSF53335 21 231 1.4E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0620 1f973ab09f917be3a59b8db57f568bfd 246 Gene3D G3DSA:3.40.50.150 48 233 3.7E-56 T 14-10-2018 Atu0620 1f973ab09f917be3a59b8db57f568bfd 246 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 33 228 29.079 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Atu3927 1b5c3f170cf04c88f31767a5401b2b7d 362 Gene3D G3DSA:2.40.37.20 15 358 1.1E-98 T 14-10-2018 Atu3927 1b5c3f170cf04c88f31767a5401b2b7d 362 SUPERFAMILY SSF51419 22 244 1.18E-38 T 14-10-2018 IPR029066 PLP-binding barrel Atu3927 1b5c3f170cf04c88f31767a5401b2b7d 362 Gene3D G3DSA:3.20.20.10 24 235 1.1E-98 T 14-10-2018 IPR029066 PLP-binding barrel Atu3927 1b5c3f170cf04c88f31767a5401b2b7d 362 SMART SM01119 252 345 3.4E-31 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Atu3927 1b5c3f170cf04c88f31767a5401b2b7d 362 Pfam PF01168 Alanine racemase, N-terminal domain 22 238 8.8E-27 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3927 1b5c3f170cf04c88f31767a5401b2b7d 362 Pfam PF14031 Putative serine dehydratase domain 252 343 3.5E-21 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Atu2183 9d048ca41ee46f93cbf7dad6aadec9a1 351 Gene3D G3DSA:3.40.50.2000 70 345 1.8E-47 T 14-10-2018 Atu2183 9d048ca41ee46f93cbf7dad6aadec9a1 351 SUPERFAMILY SSF53756 12 347 6.67E-59 T 14-10-2018 Atu2183 9d048ca41ee46f93cbf7dad6aadec9a1 351 Gene3D G3DSA:3.40.50.2000 145 328 1.8E-47 T 14-10-2018 Atu2183 9d048ca41ee46f93cbf7dad6aadec9a1 351 Pfam PF00534 Glycosyl transferases group 1 167 321 2.4E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu4369 9c4782370f6539d91433cf0b3ed2449d 340 SUPERFAMILY SSF53822 25 312 8.17E-63 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4369 9c4782370f6539d91433cf0b3ed2449d 340 Gene3D G3DSA:3.40.50.2300 132 318 3.0E-36 T 14-10-2018 Atu4369 9c4782370f6539d91433cf0b3ed2449d 340 Gene3D G3DSA:3.40.50.2300 20 120 1.1E-18 T 14-10-2018 Atu4369 9c4782370f6539d91433cf0b3ed2449d 340 Pfam PF13407 Periplasmic binding protein domain 28 284 3.1E-56 T 14-10-2018 IPR025997 Periplasmic binding protein Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 TIGRFAM TIGR01178 ade: adenine deaminase 30 574 1.9E-175 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 Pfam PF01979 Amidohydrolase family 77 350 8.4E-26 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 Hamap MF_01518 Adenine deaminase [ade]. 30 575 37.084 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 SUPERFAMILY SSF51338 22 342 9.66E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 Pfam PF13382 Adenine deaminase C-terminal domain 406 572 1.5E-66 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 Gene3D G3DSA:3.20.20.140 81 322 3.2E-118 T 14-10-2018 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 Gene3D G3DSA:2.30.40.10 24 358 3.2E-118 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2292 beebdb854ca05f2b5b74f9cfa939917d 575 SUPERFAMILY SSF51556 81 327 1.07E-31 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 SMART SM00895 108 232 1.1E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 Gene3D G3DSA:1.20.120.530 97 242 1.5E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 Pfam PF07729 FCD domain 109 231 2.5E-20 T 14-10-2018 IPR011711 GntR, C-terminal Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 SUPERFAMILY SSF46785 12 83 5.64E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 SUPERFAMILY SSF48008 106 240 1.07E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 1.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 Gene3D G3DSA:1.10.10.10 5 80 4.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3226 e4005492cf698773a0d9d69c8000eaa3 244 SMART SM00345 20 79 2.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3775 0932cfb291eb4d0851ac4b3293254a9d 121 Pfam PF08447 PAS fold 22 110 8.1E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu3775 0932cfb291eb4d0851ac4b3293254a9d 121 SUPERFAMILY SSF55785 5 115 5.23E-12 T 14-10-2018 IPR035965 PAS domain superfamily Atu3775 0932cfb291eb4d0851ac4b3293254a9d 121 Gene3D G3DSA:3.30.450.20 1 112 2.5E-12 T 14-10-2018 Atu3161 9b3cc449014d07b9eb040169a1afdd89 489 SMART SM00858 398 463 6.9E-4 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu3161 9b3cc449014d07b9eb040169a1afdd89 489 Gene3D G3DSA:3.40.50.720 47 224 2.5E-21 T 14-10-2018 Atu3161 9b3cc449014d07b9eb040169a1afdd89 489 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 60 185 4.3E-5 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Atu3161 9b3cc449014d07b9eb040169a1afdd89 489 SUPERFAMILY SSF51735 52 182 5.71E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4680 9b466d8cd509b5320b0ce4a4db17c291 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 4.6E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4680 9b466d8cd509b5320b0ce4a4db17c291 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 7.3E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4680 9b466d8cd509b5320b0ce4a4db17c291 217 Gene3D G3DSA:1.10.3720.10 3 215 1.4E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu4680 9b466d8cd509b5320b0ce4a4db17c291 217 SUPERFAMILY SSF161098 14 199 4.06E-32 T 14-10-2018 IPR035906 MetI-like superfamily Atu4178 58e2f4a332a28a03601f8146f4380c33 648 Gene3D G3DSA:2.70.70.10 482 612 5.1E-72 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu4178 58e2f4a332a28a03601f8146f4380c33 648 Pfam PF01551 Peptidase family M23 510 605 3.8E-29 T 14-10-2018 IPR016047 Peptidase M23 Atu4178 58e2f4a332a28a03601f8146f4380c33 648 Gene3D G3DSA:3.10.450.350 388 626 5.1E-72 T 14-10-2018 Atu4178 58e2f4a332a28a03601f8146f4380c33 648 SUPERFAMILY SSF51261 385 608 4.6E-62 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu4727 e6e6a70d185f53c898c9cbe58656b1da 329 SUPERFAMILY SSF53850 114 289 2.33E-12 T 14-10-2018 Atu4727 e6e6a70d185f53c898c9cbe58656b1da 329 PIRSF PIRSF017082 1 328 1.9E-81 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu4727 e6e6a70d185f53c898c9cbe58656b1da 329 Gene3D G3DSA:3.40.190.150 34 319 4.1E-113 T 14-10-2018 Atu4727 e6e6a70d185f53c898c9cbe58656b1da 329 Gene3D G3DSA:3.40.190.10 132 254 4.1E-113 T 14-10-2018 Atu4727 e6e6a70d185f53c898c9cbe58656b1da 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 53 325 2.8E-86 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 Pfam PF01578 Cytochrome C assembly protein 89 295 3.4E-51 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 643 2.2E-187 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 640 7.6E-117 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.3E-96 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 633 646 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu0975 5de62fbaa3f030bef373eb2487aa43ed 663 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-64 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 Gene3D G3DSA:3.30.565.10 308 451 3.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 Gene3D G3DSA:1.10.287.130 199 304 1.0E-7 T 14-10-2018 Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 2.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 SMART SM00387 346 452 1.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 450 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4711 bd59e43f766d8bcddbb113218b8e463f 452 SUPERFAMILY SSF55874 310 449 2.88E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0021 98f46823caed12805504961d521e79b7 447 Gene3D G3DSA:3.40.1190.10 2 296 1.4E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu0021 98f46823caed12805504961d521e79b7 447 PIRSF PIRSF001563 3 445 1.3E-94 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Atu0021 98f46823caed12805504961d521e79b7 447 Gene3D G3DSA:3.90.190.20 297 441 2.7E-13 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu0021 98f46823caed12805504961d521e79b7 447 Pfam PF08245 Mur ligase middle domain 51 273 8.1E-9 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atu0021 98f46823caed12805504961d521e79b7 447 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 146 161 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Atu0021 98f46823caed12805504961d521e79b7 447 SUPERFAMILY SSF53244 297 444 4.12E-19 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu0021 98f46823caed12805504961d521e79b7 447 TIGRFAM TIGR01499 folC: bifunctional protein FolC 28 438 1.2E-93 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Atu0021 98f46823caed12805504961d521e79b7 447 SUPERFAMILY SSF53623 10 295 1.02E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 Gene3D G3DSA:3.20.20.70 7 360 2.9E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 Pfam PF01180 Dihydroorotate dehydrogenase 45 336 6.5E-89 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 10 348 1.5E-116 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 334 42.786 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 SUPERFAMILY SSF51395 7 354 6.11E-106 T 14-10-2018 Atu0486 0ef6a998e97bb527ab014d265c8fdc48 363 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 290 310 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 31 130 3.3E-5 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 SUPERFAMILY SSF51604 130 386 6.55E-68 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 Gene3D G3DSA:3.20.20.120 130 371 9.1E-169 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 Pfam PF13378 Enolase C-terminal domain-like 167 377 2.8E-45 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 SUPERFAMILY SSF54826 1 130 1.63E-26 T 14-10-2018 Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 Gene3D G3DSA:3.30.390.10 3 408 9.1E-169 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu3029 37b8fbfd3318831f0dbe9de0219a78bc 415 SMART SM00922 164 258 5.4E-23 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu0994 69d63844c30786a1347987c47169833e 554 Pfam PF01946 Thi4 family 11 56 7.1E-8 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 SUPERFAMILY SSF51905 9 453 7.86E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0994 69d63844c30786a1347987c47169833e 554 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 451 551 1.4E-48 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 Gene3D G3DSA:3.30.9.90 83 455 1.6E-186 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 SUPERFAMILY SSF54862 455 554 6.19E-29 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 1.7E-5 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 1.7E-5 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 Gene3D G3DSA:3.50.50.60 14 388 1.6E-186 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0994 69d63844c30786a1347987c47169833e 554 Gene3D G3DSA:3.30.70.20 456 549 9.4E-37 T 14-10-2018 Atu0994 69d63844c30786a1347987c47169833e 554 SUPERFAMILY SSF54373 215 310 2.31E-36 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00550 Phosphopantetheine attachment site 2038 2098 2.5E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00550 Phosphopantetheine attachment site 996 1057 1.9E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2060 2075 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.559.10 32 396 1.5E-141 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF52777 1259 1502 1.45E-58 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF13193 AMP-binding enzyme C-terminal domain 893 967 3.2E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF47336 985 1058 3.01E-18 T 14-10-2018 IPR036736 ACP-like superfamily Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.559.30 2275 2536 3.3E-65 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.559.10 2105 2273 1.2E-38 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF52777 211 455 1.67E-59 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF56801 448 1005 9.68E-140 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF52777 2288 2535 2.33E-39 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF47336 2032 2098 6.67E-17 T 14-10-2018 IPR036736 ACP-like superfamily Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:1.10.1200.10 983 1065 4.2E-26 T 14-10-2018 IPR036736 ACP-like superfamily Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF52777 1087 1257 1.01E-42 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00501 AMP-binding enzyme 1541 1927 3.3E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00501 AMP-binding enzyme 487 885 1.1E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF56801 1496 2048 9.68E-138 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.559.30 206 453 1.5E-141 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF52777 32 204 9.34E-49 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 626 637 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1678 1689 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1017 1032 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.40.50.12780 1528 1920 6.9E-119 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00668 Condensation domain 2115 2535 3.9E-63 T 14-10-2018 IPR001242 Condensation domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00668 Condensation domain 1085 1518 5.0E-92 T 14-10-2018 IPR001242 Condensation domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Pfam PF00668 Condensation domain 30 468 3.4E-100 T 14-10-2018 IPR001242 Condensation domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SUPERFAMILY SSF52777 2122 2283 5.11E-32 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:1.10.1200.10 2033 2104 3.7E-21 T 14-10-2018 IPR036736 ACP-like superfamily Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.559.30 1261 1503 8.5E-133 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.40.50.12780 477 879 5.9E-119 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 508 909 1.5E-127 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1560 1952 1.7E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.300.30 880 982 1.0E-31 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SMART SM00823 Phosphopantetheine attachment site 993 1062 0.01 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 SMART SM00823 Phosphopantetheine attachment site 2036 2104 4.5E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2410 2559 3.1E-47 T 14-10-2018 IPR010060 Non-ribosomal peptide synthase Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.300.30 1923 2023 3.7E-23 T 14-10-2018 Atu3683 cefed7ac05721916e18343a19ab0bd0f 2563 Gene3D G3DSA:3.30.559.10 1086 1448 8.5E-133 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 SUPERFAMILY SSF51215 40 98 1.83E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 Gene3D G3DSA:1.10.10.60 179 284 6.9E-19 T 14-10-2018 Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 272 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 Gene3D G3DSA:2.60.120.10 14 90 1.7E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 Pfam PF12833 Helix-turn-helix domain 203 276 1.7E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 SMART SM00342 194 276 1.2E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3134 dc95f5b48e7e6d97c90126373384e7ec 308 SUPERFAMILY SSF46689 231 280 8.06E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 SUPERFAMILY SSF52467 184 361 1.0E-38 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 193 3.4E-36 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 Gene3D G3DSA:3.40.50.1220 214 384 1.9E-36 T 14-10-2018 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 217 350 2.4E-33 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 SUPERFAMILY SSF52518 392 593 2.14E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 SUPERFAMILY SSF52518 3 207 4.52E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 Gene3D G3DSA:3.40.50.970 2 203 1.5E-31 T 14-10-2018 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 413 565 4.6E-37 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 606 7.7E-276 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 Gene3D G3DSA:3.40.50.970 389 584 1.4E-43 T 14-10-2018 Atu4511 34e5924fb64c0673bc8d44d84e854b94 608 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 449 468 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Atu3889 27822124d13734d07c7fc558c40ebcda 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3889 27822124d13734d07c7fc558c40ebcda 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3889 27822124d13734d07c7fc558c40ebcda 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3889 27822124d13734d07c7fc558c40ebcda 286 Gene3D G3DSA:3.40.190.10 160 253 1.6E-48 T 14-10-2018 Atu3889 27822124d13734d07c7fc558c40ebcda 286 SUPERFAMILY SSF53850 88 277 8.28E-28 T 14-10-2018 Atu3889 27822124d13734d07c7fc558c40ebcda 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3889 27822124d13734d07c7fc558c40ebcda 286 Gene3D G3DSA:3.40.190.10 94 258 1.6E-48 T 14-10-2018 Atu3889 27822124d13734d07c7fc558c40ebcda 286 SUPERFAMILY SSF46785 1 110 1.3E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3889 27822124d13734d07c7fc558c40ebcda 286 Pfam PF03466 LysR substrate binding domain 87 275 1.2E-29 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3889 27822124d13734d07c7fc558c40ebcda 286 Gene3D G3DSA:1.10.10.10 1 82 2.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1402 1a77b92ca402b13b748141a826b25e45 277 SUPERFAMILY SSF161098 10 277 2.62E-65 T 14-10-2018 IPR035906 MetI-like superfamily Atu1402 1a77b92ca402b13b748141a826b25e45 277 Gene3D G3DSA:1.10.3720.10 3 268 4.9E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu1402 1a77b92ca402b13b748141a826b25e45 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 271 3.3E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3924 770390d1b2342c09bf6031573d0ea3bf 404 Pfam PF13614 AAA domain 120 296 3.5E-37 T 14-10-2018 IPR025669 AAA domain Atu3924 770390d1b2342c09bf6031573d0ea3bf 404 Gene3D G3DSA:3.40.50.300 120 402 6.6E-69 T 14-10-2018 Atu3924 770390d1b2342c09bf6031573d0ea3bf 404 TIGRFAM TIGR03453 partition_RepA: plasmid partitioning protein RepA 18 402 6.1E-197 T 14-10-2018 IPR017818 Plasmid partitioning protein, RepA Atu3924 770390d1b2342c09bf6031573d0ea3bf 404 SUPERFAMILY SSF52540 120 368 6.97E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0228 ede1918f6efc9d648be9db59e3a65a52 101 Gene3D G3DSA:3.40.30.10 1 101 3.7E-45 T 14-10-2018 Atu0228 ede1918f6efc9d648be9db59e3a65a52 101 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 8 80 1.8E-22 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type Atu0228 ede1918f6efc9d648be9db59e3a65a52 101 SUPERFAMILY SSF52833 5 89 3.35E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0228 ede1918f6efc9d648be9db59e3a65a52 101 Pfam PF10262 Rdx family 7 80 1.6E-33 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type Atu2130 f5958d37743cc7677b7ed2f7208e1e55 113 Gene3D G3DSA:3.30.1330.40 1 113 7.8E-36 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu2130 f5958d37743cc7677b7ed2f7208e1e55 113 Pfam PF01042 Endoribonuclease L-PSP 3 112 1.1E-22 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Atu2130 f5958d37743cc7677b7ed2f7208e1e55 113 SUPERFAMILY SSF55298 4 113 6.44E-29 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 Gene3D G3DSA:3.30.540.10 3 132 1.1E-38 T 14-10-2018 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 SUPERFAMILY SSF56655 6 236 5.89E-60 T 14-10-2018 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 Pfam PF00459 Inositol monophosphatase family 7 202 5.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 74 87 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 Gene3D G3DSA:3.40.190.80 138 240 3.3E-8 T 14-10-2018 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 32 52 4.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 54 70 4.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 155 176 4.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6196 2c9519a97dad2f8d7cd7579fb45a9157 242 PRINTS PR00377 Inositol monophosphatase superfamily signature 74 90 4.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 4.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 4.5E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu3902 23c223e2338104c4c4313b52eed53395 815 SUPERFAMILY SSF56014 632 800 6.02E-45 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 Gene3D G3DSA:3.50.50.60 6 279 1.3E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3902 23c223e2338104c4c4313b52eed53395 815 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 5 793 2.1E-269 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Atu3902 23c223e2338104c4c4313b52eed53395 815 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 631 769 1.6E-25 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu3902 23c223e2338104c4c4313b52eed53395 815 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 557 620 1.2E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu3902 23c223e2338104c4c4313b52eed53395 815 PIRSF PIRSF037149 1 812 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Atu3902 23c223e2338104c4c4313b52eed53395 815 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 279 9.5E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu3902 23c223e2338104c4c4313b52eed53395 815 Gene3D G3DSA:3.30.390.30 314 392 1.6E-7 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu3902 23c223e2338104c4c4313b52eed53395 815 SUPERFAMILY SSF51905 2 189 2.51E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3902 23c223e2338104c4c4313b52eed53395 815 Gene3D G3DSA:3.30.413.10 625 786 1.2E-30 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 Gene3D G3DSA:3.50.50.60 109 243 1.3E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3902 23c223e2338104c4c4313b52eed53395 815 Pfam PF04324 BFD-like [2Fe-2S] binding domain 482 531 4.4E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atu3902 23c223e2338104c4c4313b52eed53395 815 Pfam PF04324 BFD-like [2Fe-2S] binding domain 419 466 2.0E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 8.4E-14 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 8.4E-14 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 8.4E-14 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 8.4E-14 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 SUPERFAMILY SSF55124 491 624 6.54E-24 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu3902 23c223e2338104c4c4313b52eed53395 815 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu3902 23c223e2338104c4c4313b52eed53395 815 SUPERFAMILY SSF51905 146 304 1.2E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3902 23c223e2338104c4c4313b52eed53395 815 Gene3D G3DSA:1.10.10.1100 418 473 1.8E-9 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 278 2.7E-12 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 2.7E-12 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 2.7E-12 T 14-10-2018 Atu3902 23c223e2338104c4c4313b52eed53395 815 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 104 113 2.7E-12 T 14-10-2018 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 Gene3D G3DSA:3.40.50.1220 183 309 7.5E-55 T 14-10-2018 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 1.7E-33 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 PIRSF PIRSF000089 1 309 1.9E-101 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 Pfam PF01012 Electron transfer flavoprotein domain 4 168 5.9E-36 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 SUPERFAMILY SSF52402 3 180 4.77E-53 T 14-10-2018 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 SUPERFAMILY SSF52467 188 308 1.14E-44 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 SMART SM00893 3 181 2.9E-53 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Atu3596 a9d999b5db5bf01e22e40d6fbbc541ac 309 Gene3D G3DSA:3.40.50.620 2 182 1.8E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu5234 1e0d3ae73cfe2bbdf609c100f4b62641 222 Gene3D G3DSA:1.10.3720.10 3 216 2.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu5234 1e0d3ae73cfe2bbdf609c100f4b62641 222 SUPERFAMILY SSF161098 14 202 3.01E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu5234 1e0d3ae73cfe2bbdf609c100f4b62641 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 110 1.4E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu5234 1e0d3ae73cfe2bbdf609c100f4b62641 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 7.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5365 b5778bbe45785418bfdb3a82e55b8a88 102 Pfam PF00563 EAL domain 1 72 2.0E-17 T 14-10-2018 IPR001633 EAL domain Atu5365 b5778bbe45785418bfdb3a82e55b8a88 102 Gene3D G3DSA:3.20.20.450 1 89 2.3E-25 T 14-10-2018 IPR035919 EAL domain superfamily Atu5365 b5778bbe45785418bfdb3a82e55b8a88 102 SUPERFAMILY SSF141868 1 85 8.63E-24 T 14-10-2018 IPR035919 EAL domain superfamily Atu5380 1d1ec39facc25ea837a7ceb7208345f2 167 SUPERFAMILY SSF55729 1 151 5.67E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu5380 1d1ec39facc25ea837a7ceb7208345f2 167 Gene3D G3DSA:3.40.630.30 1 161 5.7E-42 T 14-10-2018 Atu5380 1d1ec39facc25ea837a7ceb7208345f2 167 Pfam PF13302 Acetyltransferase (GNAT) domain 6 144 2.2E-32 T 14-10-2018 IPR000182 GNAT domain Atu3343 8f2a540d36a1d49a6e42cac57cd4b4f2 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 262 5.0E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu3343 8f2a540d36a1d49a6e42cac57cd4b4f2 349 Gene3D G3DSA:3.40.50.720 1 119 8.5E-31 T 14-10-2018 Atu3343 8f2a540d36a1d49a6e42cac57cd4b4f2 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 9.1E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3343 8f2a540d36a1d49a6e42cac57cd4b4f2 349 Gene3D G3DSA:3.30.360.10 127 347 8.2E-40 T 14-10-2018 Atu3343 8f2a540d36a1d49a6e42cac57cd4b4f2 349 SUPERFAMILY SSF55347 128 312 3.14E-32 T 14-10-2018 Atu3343 8f2a540d36a1d49a6e42cac57cd4b4f2 349 SUPERFAMILY SSF51735 2 152 1.05E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 Pfam PF12804 MobA-like NTP transferase domain 7 147 1.3E-23 T 14-10-2018 IPR025877 MobA-like NTP transferase Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 380 413 5.3E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 301 3.8E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 388 416 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 437 36.693 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 SUPERFAMILY SSF53448 6 254 2.48E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 SUPERFAMILY SSF51161 251 431 2.55E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 Gene3D G3DSA:3.90.550.10 2 229 3.2E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 7 434 2.2E-141 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Atu1787 b0b2eb02ddf14894df0234ebe890799c 453 Gene3D G3DSA:2.160.10.10 230 437 2.0E-55 T 14-10-2018 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 Gene3D G3DSA:3.50.30.80 421 573 5.0E-55 T 14-10-2018 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 4.5E-253 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 SUPERFAMILY SSF52016 421 607 2.98E-60 T 14-10-2018 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 Pfam PF00920 Dehydratase family 34 605 4.2E-220 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 608 44.944 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu1918 09535012ad6a9b8cac0c58be78a625ea 611 SUPERFAMILY SSF143975 4 420 1.12E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu2452 22ba98d8ff918343807203ede6130a7c 204 SUPERFAMILY SSF53474 9 200 5.4E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2452 22ba98d8ff918343807203ede6130a7c 204 Pfam PF01738 Dienelactone hydrolase family 77 183 9.7E-8 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Atu2452 22ba98d8ff918343807203ede6130a7c 204 Gene3D G3DSA:3.40.50.1820 1 203 3.6E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 Gene3D G3DSA:1.10.10.10 1 57 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 SUPERFAMILY SSF54909 67 147 1.19E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.2E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 SMART SM00344 4 113 7.4E-36 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 SUPERFAMILY SSF46785 3 94 6.56E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 Gene3D G3DSA:3.30.70.920 61 141 2.0E-21 T 14-10-2018 Atu3291 8f06cf44c74d204cd1c1b1ea9ea4aaec 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.0E-16 T 14-10-2018 Atu8190 5bb9a9fc2c9aa885fd10f0d50745da57 65 Pfam PF04588 Hypoxia induced protein conserved region 8 56 1.3E-12 T 14-10-2018 IPR007667 Hypoxia induced protein, domain Atu0716 3ecd04f1b349ec4be6137e93c479ff39 213 Hamap MF_01398 ATP synthase subunit b [atpF]. 56 193 10.691 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atu0716 3ecd04f1b349ec4be6137e93c479ff39 213 Pfam PF00430 ATP synthase B/B' CF(0) 63 190 1.8E-17 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atu4619 8983daef9b44515cafdf699ed538b920 688 SUPERFAMILY SSF52540 5 630 9.04E-127 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4619 8983daef9b44515cafdf699ed538b920 688 Pfam PF13361 UvrD-like helicase C-terminal domain 560 622 1.2E-18 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atu4619 8983daef9b44515cafdf699ed538b920 688 Gene3D G3DSA:1.10.10.160 126 211 1.4E-75 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Atu4619 8983daef9b44515cafdf699ed538b920 688 Pfam PF00580 UvrD/REP helicase N-terminal domain 28 288 1.6E-53 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atu4619 8983daef9b44515cafdf699ed538b920 688 Gene3D G3DSA:3.40.50.300 303 629 2.5E-72 T 14-10-2018 Atu4619 8983daef9b44515cafdf699ed538b920 688 Pfam PF13361 UvrD-like helicase C-terminal domain 299 447 5.3E-22 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atu4619 8983daef9b44515cafdf699ed538b920 688 Gene3D G3DSA:1.10.486.10 404 547 2.5E-72 T 14-10-2018 Atu4619 8983daef9b44515cafdf699ed538b920 688 Gene3D G3DSA:3.40.50.300 9 292 1.4E-75 T 14-10-2018 Atu4582 190720298619b31684acbe859004f8ac 111 SUPERFAMILY SSF54862 2 98 1.06E-22 T 14-10-2018 Atu4582 190720298619b31684acbe859004f8ac 111 Gene3D G3DSA:3.30.70.20 2 107 6.0E-28 T 14-10-2018 Atu4582 190720298619b31684acbe859004f8ac 111 Pfam PF00037 4Fe-4S binding domain 34 56 4.0E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu4582 190720298619b31684acbe859004f8ac 111 Pfam PF11953 Domain of unknown function (DUF3470) 66 104 2.1E-10 T 14-10-2018 IPR022569 Ferredoxin, C-terminal Atu4582 190720298619b31684acbe859004f8ac 111 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.1E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atu4582 190720298619b31684acbe859004f8ac 111 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.1E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atu4582 190720298619b31684acbe859004f8ac 111 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.1E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atu4582 190720298619b31684acbe859004f8ac 111 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu4069 8f251882e2840b310d413ce5cb8867cc 986 SUPERFAMILY SSF51905 162 458 7.54E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Pfam PF01571 Aminomethyltransferase folate-binding domain 603 868 1.6E-69 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Gene3D G3DSA:3.10.20.440 13 107 8.0E-8 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 875 974 3.8E-15 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 4 985 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 SUPERFAMILY SSF103025 596 884 5.49E-93 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 409 425 1.1E-8 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 1.1E-8 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.1E-8 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Gene3D G3DSA:3.50.50.60 295 417 2.4E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 439 3.3E-12 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 SUPERFAMILY SSF101790 887 983 3.11E-19 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Gene3D G3DSA:3.30.1360.120 592 977 9.0E-97 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 194 1.3E-7 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 424 1.3E-7 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 295 1.3E-7 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Gene3D G3DSA:3.50.50.60 172 577 2.4E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4069 8f251882e2840b310d413ce5cb8867cc 986 PIRSF PIRSF037980 1 986 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Gene3D G3DSA:1.10.10.1100 494 570 2.4E-86 T 14-10-2018 Atu4069 8f251882e2840b310d413ce5cb8867cc 986 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 2.2E-23 T 14-10-2018 Atu3009 efc0fc522d23fd71484d4c6cba4f4bb1 355 Pfam PF01757 Acyltransferase family 4 316 1.3E-27 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu1363 45f9b8315fa75da8e636260b1dc35d82 117 SUPERFAMILY SSF54736 32 116 4.45E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atu1363 45f9b8315fa75da8e636260b1dc35d82 117 Gene3D G3DSA:3.30.1390.10 17 117 4.7E-43 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atu1363 45f9b8315fa75da8e636260b1dc35d82 117 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 23 112 28.244 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Atu1363 45f9b8315fa75da8e636260b1dc35d82 117 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 34 112 1.3E-33 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 10 102 2.8E-13 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 270 5.3E-34 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 PIRSF PIRSF000193 8 272 5.5E-61 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 270 24.98 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 SUPERFAMILY SSF51735 10 162 3.0E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 9 270 6.7E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 SUPERFAMILY SSF48179 165 270 5.1E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 Gene3D G3DSA:3.40.50.720 8 166 1.0E-38 T 14-10-2018 Atu2209 dbb1cd4d1df72d956aeb1f67c281fe97 272 Gene3D G3DSA:1.10.3730.10 167 272 7.1E-39 T 14-10-2018 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 164 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 64.841 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.1E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.1E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.1E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.1E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 SMART SM01130 1 291 3.6E-148 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 5.2E-95 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 1.3E-87 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 Gene3D G3DSA:3.20.20.70 1 294 8.5E-134 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 SUPERFAMILY SSF51569 2 291 3.14E-104 T 14-10-2018 Atu1024 36e1acba4455ef8898d8f3d3c5327e58 294 PIRSF PIRSF001365 1 294 8.1E-94 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0507 12a25408a073b7944a9aca9c9e90da99 114 Pfam PF03334 Na+/H+ antiporter subunit 18 98 2.4E-19 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Atu0507 12a25408a073b7944a9aca9c9e90da99 114 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 18 107 4.2E-26 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 158 1.8E-75 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 230 530 1.5E-109 T 14-10-2018 IPR014146 DNA ligase D, ligase domain Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 239 768 9.3E-185 T 14-10-2018 IPR014143 DNA ligase D Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Pfam PF13298 DNA polymerase Ligase (LigD) 33 137 2.1E-39 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Gene3D G3DSA:2.40.50.140 414 532 2.4E-34 T 14-10-2018 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 SUPERFAMILY SSF50249 415 533 2.4E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Pfam PF04679 ATP dependent DNA ligase C terminal region 431 524 3.0E-24 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Gene3D G3DSA:3.30.470.30 253 368 3.5E-43 T 14-10-2018 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Gene3D G3DSA:3.90.920.30 555 769 1.4E-72 T 14-10-2018 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Gene3D G3DSA:3.30.1490.70 237 409 3.5E-43 T 14-10-2018 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 SUPERFAMILY SSF56091 218 412 3.42E-43 T 14-10-2018 Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 548 768 4.4E-79 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain Atu4632 87fff7a1e59d61b9e664d04efb057ab8 771 Pfam PF01068 ATP dependent DNA ligase domain 242 411 1.3E-22 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Atu2828 fad2d22d586de15f7c02b0945fa5712d 293 Gene3D G3DSA:1.10.10.2830 115 226 7.8E-38 T 14-10-2018 Atu2828 fad2d22d586de15f7c02b0945fa5712d 293 SUPERFAMILY SSF110849 39 174 3.66E-32 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu2828 fad2d22d586de15f7c02b0945fa5712d 293 SMART SM00470 38 128 1.3E-33 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu2828 fad2d22d586de15f7c02b0945fa5712d 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 207 3.1E-54 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atu2828 fad2d22d586de15f7c02b0945fa5712d 293 Pfam PF02195 ParB-like nuclease domain 40 127 5.4E-27 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu2828 fad2d22d586de15f7c02b0945fa5712d 293 Gene3D G3DSA:3.90.1530.30 51 114 3.5E-28 T 14-10-2018 Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 Gene3D G3DSA:2.60.40.10 399 522 3.5E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 SUPERFAMILY SSF54862 117 403 2.34E-27 T 14-10-2018 Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 284 295 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 48 515 4.4E-169 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 Pfam PF12801 4Fe-4S binding domain 109 142 1.1E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 398 523 1.1E-28 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Atu1530 8c3273cd07ac97f84c2e8577f5f6a6da 527 Pfam PF13746 4Fe-4S dicluster domain 231 335 6.1E-43 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu0061 d6765b49da2d105ae172470e28170287 602 SUPERFAMILY SSF46785 394 510 1.63E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0061 d6765b49da2d105ae172470e28170287 602 SMART SM00956 403 506 4.1E-42 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Atu0061 d6765b49da2d105ae172470e28170287 602 SMART SM00490 242 323 2.3E-28 T 14-10-2018 IPR001650 Helicase, C-terminal Atu0061 d6765b49da2d105ae172470e28170287 602 Pfam PF00570 HRDC domain 529 595 5.5E-25 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Atu0061 d6765b49da2d105ae172470e28170287 602 Gene3D G3DSA:3.40.50.300 201 332 2.4E-40 T 14-10-2018 Atu0061 d6765b49da2d105ae172470e28170287 602 Pfam PF09382 RQC domain 398 509 5.2E-33 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Atu0061 d6765b49da2d105ae172470e28170287 602 Pfam PF00271 Helicase conserved C-terminal domain 219 322 1.6E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Atu0061 d6765b49da2d105ae172470e28170287 602 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 597 4.4E-237 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Atu0061 d6765b49da2d105ae172470e28170287 602 SUPERFAMILY SSF47819 521 598 1.66E-24 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Atu0061 d6765b49da2d105ae172470e28170287 602 Gene3D G3DSA:3.40.50.300 1 200 5.1E-75 T 14-10-2018 Atu0061 d6765b49da2d105ae172470e28170287 602 SUPERFAMILY SSF52540 58 344 2.22E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0061 d6765b49da2d105ae172470e28170287 602 Gene3D G3DSA:1.10.10.10 333 515 5.5E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0061 d6765b49da2d105ae172470e28170287 602 Gene3D G3DSA:1.10.150.80 522 602 3.8E-25 T 14-10-2018 Atu0061 d6765b49da2d105ae172470e28170287 602 Pfam PF00270 DEAD/DEAH box helicase 22 177 5.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu0061 d6765b49da2d105ae172470e28170287 602 SMART SM00341 525 602 3.0E-19 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Atu0061 d6765b49da2d105ae172470e28170287 602 SMART SM00487 14 205 3.6E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu0061 d6765b49da2d105ae172470e28170287 602 Pfam PF16124 RecQ zinc-binding 334 395 9.4E-15 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Atu0061 d6765b49da2d105ae172470e28170287 602 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 455 2.6E-151 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Atu2141 ec6a8759c13552b314f595072b1a4051 140 Pfam PF01381 Helix-turn-helix 14 63 2.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu2141 ec6a8759c13552b314f595072b1a4051 140 SUPERFAMILY SSF47413 15 66 3.52E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu2141 ec6a8759c13552b314f595072b1a4051 140 Gene3D G3DSA:1.10.260.40 10 69 7.6E-10 T 14-10-2018 Atu2141 ec6a8759c13552b314f595072b1a4051 140 SMART SM00530 10 65 1.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 67 87 5.2E-57 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 209 233 5.2E-57 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 126 146 5.2E-57 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 50 67 5.2E-57 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 105 125 5.2E-57 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 161 187 5.2E-57 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 52 233 7.1E-83 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu2688 e8b0c4332f13881b81ed5532280f2fcf 253 Pfam PF01578 Cytochrome C assembly protein 17 189 6.0E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Atu4446 07c41b6f3b39d8ebd14b0d6d4053cf9b 317 Gene3D G3DSA:1.10.10.10 2 56 4.8E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4446 07c41b6f3b39d8ebd14b0d6d4053cf9b 317 Gene3D G3DSA:3.40.50.1360 57 315 1.0E-63 T 14-10-2018 Atu4446 07c41b6f3b39d8ebd14b0d6d4053cf9b 317 SUPERFAMILY SSF100950 61 316 1.26E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu4446 07c41b6f3b39d8ebd14b0d6d4053cf9b 317 Pfam PF04198 Putative sugar-binding domain 61 315 1.8E-74 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Atu3455 a4f0d977dcfecccfb1a7c8db8c3cffdb 532 Gene3D G3DSA:3.90.76.10 42 207 2.1E-106 T 14-10-2018 Atu3455 a4f0d977dcfecccfb1a7c8db8c3cffdb 532 Gene3D G3DSA:3.40.190.10 208 520 2.1E-106 T 14-10-2018 Atu3455 a4f0d977dcfecccfb1a7c8db8c3cffdb 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 442 4.6E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3455 a4f0d977dcfecccfb1a7c8db8c3cffdb 532 SUPERFAMILY SSF53850 31 522 2.9E-104 T 14-10-2018 Atu3455 a4f0d977dcfecccfb1a7c8db8c3cffdb 532 PIRSF PIRSF002741 2 523 2.9E-72 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3455 a4f0d977dcfecccfb1a7c8db8c3cffdb 532 Gene3D G3DSA:3.10.105.10 287 508 2.1E-106 T 14-10-2018 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 PIRSF PIRSF036490 1 788 0.0 T 14-10-2018 IPR011408 Aldehyde dehydrogenase Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 Pfam PF00171 Aldehyde dehydrogenase family 33 476 5.4E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 Pfam PF00171 Aldehyde dehydrogenase family 539 753 1.2E-38 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 SUPERFAMILY SSF53720 18 475 2.62E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 Gene3D G3DSA:3.40.309.10 261 450 5.7E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 Gene3D G3DSA:3.40.605.10 505 788 7.6E-51 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 SUPERFAMILY SSF53720 506 752 2.09E-46 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4849 c948b8014a2c4ce54b6e4b706a799486 788 Gene3D G3DSA:3.40.605.10 28 475 5.7E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 SUPERFAMILY SSF51246 329 442 2.88E-45 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 SUPERFAMILY SSF52440 1 113 1.15E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 3.0E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 Gene3D G3DSA:3.30.470.130 1 443 1.4E-190 T 14-10-2018 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 SMART SM00878 334 439 4.9E-67 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 SUPERFAMILY SSF56059 83 346 1.18E-70 T 14-10-2018 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 Pfam PF02785 Biotin carboxylase C-terminal domain 334 439 5.5E-40 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.6E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1330 42a423a571e5526b45bbd49bd4e388e9 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 1.4E-217 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Atu4403 1ca0a8b9e0750ea2c3075440a00846a6 250 Gene3D G3DSA:3.40.50.300 6 246 6.7E-59 T 14-10-2018 Atu4403 1ca0a8b9e0750ea2c3075440a00846a6 250 SMART SM00382 31 205 1.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4403 1ca0a8b9e0750ea2c3075440a00846a6 250 SUPERFAMILY SSF52540 7 216 6.96E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4403 1ca0a8b9e0750ea2c3075440a00846a6 250 Pfam PF00005 ABC transporter 23 155 1.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4403 1ca0a8b9e0750ea2c3075440a00846a6 250 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 SMART SM00342 240 323 7.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 Pfam PF12833 Helix-turn-helix domain 246 323 3.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 SUPERFAMILY SSF46689 276 323 1.3E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 SUPERFAMILY SSF52317 12 205 3.15E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 SUPERFAMILY SSF46689 223 273 9.86E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 Gene3D G3DSA:3.40.50.880 6 212 2.3E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 Pfam PF01965 DJ-1/PfpI family 89 184 1.8E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu0264 3fc6f2f431c919a12ceb953cbcfa9e4c 327 Gene3D G3DSA:1.10.10.60 221 326 3.7E-24 T 14-10-2018 Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 Gene3D G3DSA:3.40.50.720 174 318 1.0E-138 T 14-10-2018 Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 SUPERFAMILY SSF50129 1 186 1.98E-66 T 14-10-2018 IPR011032 GroES-like superfamily Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 SUPERFAMILY SSF50129 324 375 4.24E-13 T 14-10-2018 IPR011032 GroES-like superfamily Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 Gene3D G3DSA:3.90.180.10 6 370 1.0E-138 T 14-10-2018 Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 374 1.8E-176 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 SUPERFAMILY SSF51735 160 340 1.26E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 Pfam PF00107 Zinc-binding dehydrogenase 197 326 2.3E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 113 5.1E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1670 cec6379dabf86a98aae5c1a688da00ac 375 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 142 4.0E-77 T 14-10-2018 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 Pfam PF01220 Dehydroquinase class II 5 140 5.5E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 143 3.1E-61 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 145 69.149 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 SUPERFAMILY SSF52304 5 143 8.37E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 PIRSF PIRSF001399 1 145 1.9E-65 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1332 c2ae125f8535e16ced9e6aab42a01971 145 Gene3D G3DSA:3.40.50.9100 1 145 1.1E-65 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 225 4.7E-104 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 9.5E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 SMART SM00448 3 116 3.2E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 Gene3D G3DSA:1.10.10.10 127 227 5.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 Pfam PF00072 Response regulator receiver domain 5 117 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 SUPERFAMILY SSF52172 3 125 7.4E-39 T 14-10-2018 IPR011006 CheY-like superfamily Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 SMART SM00862 150 225 9.6E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 Gene3D G3DSA:3.40.50.2300 2 126 3.2E-35 T 14-10-2018 Atu0425 c73fa60e54da2905379c0e6ffae554f5 227 SUPERFAMILY SSF46894 128 226 1.55E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu5539 97666c48603b4bf489fb91cdf0a397bf 291 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 227 5.7E-31 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu5539 97666c48603b4bf489fb91cdf0a397bf 291 SUPERFAMILY SSF111369 46 207 6.28E-22 T 14-10-2018 Atu5539 97666c48603b4bf489fb91cdf0a397bf 291 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 236 2.1E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu5539 97666c48603b4bf489fb91cdf0a397bf 291 Gene3D G3DSA:2.40.30.170 189 205 1.7E-32 T 14-10-2018 Atu5539 97666c48603b4bf489fb91cdf0a397bf 291 Gene3D G3DSA:2.40.50.100 47 188 1.7E-32 T 14-10-2018 Atu5539 97666c48603b4bf489fb91cdf0a397bf 291 Gene3D G3DSA:1.10.287.470 81 154 1.7E-32 T 14-10-2018 Atu4293 0fbe81873f16639bfc7db4891461a34d 341 Gene3D G3DSA:3.20.20.30 13 331 1.1E-76 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4293 0fbe81873f16639bfc7db4891461a34d 341 SUPERFAMILY SSF51679 22 331 3.2E-54 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4293 0fbe81873f16639bfc7db4891461a34d 341 Pfam PF00296 Luciferase-like monooxygenase 45 286 6.2E-37 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu4293 0fbe81873f16639bfc7db4891461a34d 341 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 19 328 5.0E-115 T 14-10-2018 IPR020020 Luciferase-type oxidoreductase Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 27 702 4.2E-284 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 PIRSF PIRSF015589 6 718 8.2E-266 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Hamap MF_00347 Polyphosphate kinase [ppk]. 25 705 27.52 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Pfam PF02503 Polyphosphate kinase middle domain 142 337 1.5E-55 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Pfam PF13090 Polyphosphate kinase C-terminal domain 348 700 1.9E-151 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 SUPERFAMILY SSF56024 517 701 5.16E-68 T 14-10-2018 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 SUPERFAMILY SSF56024 336 512 9.42E-58 T 14-10-2018 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 SUPERFAMILY SSF143724 130 329 1.92E-59 T 14-10-2018 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Gene3D G3DSA:3.30.870.10 521 704 2.3E-64 T 14-10-2018 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 SUPERFAMILY SSF140356 25 127 3.53E-34 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Gene3D G3DSA:3.30.1840.10 21 328 9.8E-95 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Pfam PF13089 Polyphosphate kinase N-terminal domain 28 133 4.1E-35 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Atu1144 24a31f302d5296d5fff03750e56dbd2c 732 Gene3D G3DSA:3.30.870.10 337 517 1.5E-72 T 14-10-2018 Atu0343 b6470bf560129d5241b556a242b663f2 746 Gene3D G3DSA:3.30.565.10 299 455 1.9E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0343 b6470bf560129d5241b556a242b663f2 746 SUPERFAMILY SSF52172 616 744 7.12E-27 T 14-10-2018 IPR011006 CheY-like superfamily Atu0343 b6470bf560129d5241b556a242b663f2 746 SMART SM00448 617 734 1.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0343 b6470bf560129d5241b556a242b663f2 746 Gene3D G3DSA:3.40.50.12740 617 746 4.3E-26 T 14-10-2018 Atu0343 b6470bf560129d5241b556a242b663f2 746 Pfam PF00072 Response regulator receiver domain 619 734 2.7E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0343 b6470bf560129d5241b556a242b663f2 746 Gene3D G3DSA:1.10.287.130 206 298 9.4E-21 T 14-10-2018 Atu0343 b6470bf560129d5241b556a242b663f2 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 454 2.8E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0343 b6470bf560129d5241b556a242b663f2 746 SMART SM00387 347 457 2.1E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0343 b6470bf560129d5241b556a242b663f2 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0343 b6470bf560129d5241b556a242b663f2 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0343 b6470bf560129d5241b556a242b663f2 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0343 b6470bf560129d5241b556a242b663f2 746 SMART SM00388 235 300 1.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0343 b6470bf560129d5241b556a242b663f2 746 SUPERFAMILY SSF55785 112 213 1.14E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu0343 b6470bf560129d5241b556a242b663f2 746 SUPERFAMILY SSF55874 289 453 1.83E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0343 b6470bf560129d5241b556a242b663f2 746 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 300 6.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0343 b6470bf560129d5241b556a242b663f2 746 SUPERFAMILY SSF47384 223 301 1.96E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu2529 f34b85580dd1d62208fae9932284c1c5 327 Pfam PF04909 Amidohydrolase 34 324 2.8E-49 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu2529 f34b85580dd1d62208fae9932284c1c5 327 SUPERFAMILY SSF51556 8 325 1.51E-87 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2529 f34b85580dd1d62208fae9932284c1c5 327 Gene3D G3DSA:3.20.20.140 1 327 2.6E-119 T 14-10-2018 Atu5284 130d86c24ade3faad182802e34dea14d 594 Gene3D G3DSA:3.20.20.80 102 514 3.5E-154 T 14-10-2018 Atu5284 130d86c24ade3faad182802e34dea14d 594 Pfam PF11941 Domain of unknown function (DUF3459) 507 577 8.5E-7 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Atu5284 130d86c24ade3faad182802e34dea14d 594 Pfam PF00128 Alpha amylase, catalytic domain 129 210 2.3E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu5284 130d86c24ade3faad182802e34dea14d 594 SUPERFAMILY SSF51445 91 516 1.25E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu5284 130d86c24ade3faad182802e34dea14d 594 SMART SM00642 89 460 5.7E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu5284 130d86c24ade3faad182802e34dea14d 594 PIRSF PIRSF006337 5 593 3.5E-211 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Atu5284 130d86c24ade3faad182802e34dea14d 594 SUPERFAMILY SSF81296 6 93 7.28E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set Atu5284 130d86c24ade3faad182802e34dea14d 594 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 20 563 5.6E-215 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Atu5284 130d86c24ade3faad182802e34dea14d 594 Gene3D G3DSA:1.10.10.760 442 486 3.5E-154 T 14-10-2018 Atu5284 130d86c24ade3faad182802e34dea14d 594 Gene3D G3DSA:2.60.40.10 5 98 2.8E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 SUPERFAMILY SSF46894 119 221 4.54E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 SMART SM00862 145 220 9.9E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 Gene3D G3DSA:1.10.10.10 123 224 2.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 SUPERFAMILY SSF52172 1 118 1.04E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-32 T 14-10-2018 Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 Pfam PF00072 Response regulator receiver domain 4 112 3.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 SMART SM00448 1 112 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4638 85cb2d762f0bac69955d55d4b5c12f49 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 7.2E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu1338 2df3ffd4073f42932ece4875762c26b8 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1338 2df3ffd4073f42932ece4875762c26b8 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1338 2df3ffd4073f42932ece4875762c26b8 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1338 2df3ffd4073f42932ece4875762c26b8 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 3.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1338 2df3ffd4073f42932ece4875762c26b8 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1338 2df3ffd4073f42932ece4875762c26b8 234 SUPERFAMILY SSF51735 4 231 3.1E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1338 2df3ffd4073f42932ece4875762c26b8 234 Gene3D G3DSA:3.40.50.720 1 234 3.3E-67 T 14-10-2018 Atu1338 2df3ffd4073f42932ece4875762c26b8 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 231 7.7E-46 T 14-10-2018 Atu1362 037146f60d602977b653e59ea5130f41 861 SUPERFAMILY SSF55785 341 441 5.76E-8 T 14-10-2018 IPR035965 PAS domain superfamily Atu1362 037146f60d602977b653e59ea5130f41 861 Pfam PF00072 Response regulator receiver domain 742 853 2.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1362 037146f60d602977b653e59ea5130f41 861 Gene3D G3DSA:3.30.450.20 91 218 4.2E-9 T 14-10-2018 Atu1362 037146f60d602977b653e59ea5130f41 861 Gene3D G3DSA:3.30.450.20 324 467 1.9E-12 T 14-10-2018 Atu1362 037146f60d602977b653e59ea5130f41 861 SMART SM00387 581 704 1.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1362 037146f60d602977b653e59ea5130f41 861 SUPERFAMILY SSF55785 84 202 3.84E-9 T 14-10-2018 IPR035965 PAS domain superfamily Atu1362 037146f60d602977b653e59ea5130f41 861 Pfam PF00989 PAS fold 89 196 3.8E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 Atu1362 037146f60d602977b653e59ea5130f41 861 Pfam PF08448 PAS fold 346 459 3.2E-5 T 14-10-2018 IPR013656 PAS fold-4 Atu1362 037146f60d602977b653e59ea5130f41 861 SMART SM00448 740 853 2.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1362 037146f60d602977b653e59ea5130f41 861 SMART SM00091 216 284 0.23 T 14-10-2018 IPR000014 PAS domain Atu1362 037146f60d602977b653e59ea5130f41 861 SMART SM00091 340 409 0.003 T 14-10-2018 IPR000014 PAS domain Atu1362 037146f60d602977b653e59ea5130f41 861 SMART SM00091 86 152 0.7 T 14-10-2018 IPR000014 PAS domain Atu1362 037146f60d602977b653e59ea5130f41 861 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 89 210 9.3E-6 T 14-10-2018 IPR000014 PAS domain Atu1362 037146f60d602977b653e59ea5130f41 861 Gene3D G3DSA:3.30.565.10 542 707 8.6E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1362 037146f60d602977b653e59ea5130f41 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 701 2.4E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1362 037146f60d602977b653e59ea5130f41 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 647 2.4E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1362 037146f60d602977b653e59ea5130f41 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 682 2.4E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1362 037146f60d602977b653e59ea5130f41 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 661 2.4E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1362 037146f60d602977b653e59ea5130f41 861 Gene3D G3DSA:1.10.287.130 468 538 1.1E-18 T 14-10-2018 Atu1362 037146f60d602977b653e59ea5130f41 861 SUPERFAMILY SSF52172 740 858 1.38E-31 T 14-10-2018 IPR011006 CheY-like superfamily Atu1362 037146f60d602977b653e59ea5130f41 861 SUPERFAMILY SSF47384 466 536 1.31E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1362 037146f60d602977b653e59ea5130f41 861 Gene3D G3DSA:3.40.50.2300 734 861 2.2E-31 T 14-10-2018 Atu1362 037146f60d602977b653e59ea5130f41 861 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 702 1.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1362 037146f60d602977b653e59ea5130f41 861 SMART SM00388 473 539 0.001 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1362 037146f60d602977b653e59ea5130f41 861 SUPERFAMILY SSF55874 529 707 4.98E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1362 037146f60d602977b653e59ea5130f41 861 SUPERFAMILY SSF55785 200 304 8.55E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu0651 ca05dd3a10dc21e31dbb15c891adccf2 317 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 28 313 5.2E-111 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Atu0651 ca05dd3a10dc21e31dbb15c891adccf2 317 Gene3D G3DSA:1.10.357.140 43 211 7.9E-42 T 14-10-2018 Atu0651 ca05dd3a10dc21e31dbb15c891adccf2 317 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 94 116 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site Atu0651 ca05dd3a10dc21e31dbb15c891adccf2 317 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 23 315 27.185 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Atu0651 ca05dd3a10dc21e31dbb15c891adccf2 317 Pfam PF01040 UbiA prenyltransferase family 47 296 5.3E-55 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Gene3D G3DSA:3.90.1440.10 231 357 5.3E-175 T 14-10-2018 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 SMART SM00958 230 347 1.9E-73 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 ProSitePatterns PS01312 SecA family signature. 490 505 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 30 812 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 SUPERFAMILY SSF52540 406 614 2.36E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Gene3D G3DSA:3.10.450.50 862 900 4.1E-7 T 14-10-2018 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Gene3D G3DSA:1.10.3060.10 617 827 2.1E-70 T 14-10-2018 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 7 827 19.873 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Pfam PF07516 SecA Wing and Scaffold domain 613 824 1.1E-62 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 SUPERFAMILY SSF81767 229 357 9.29E-43 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 SUPERFAMILY SSF81886 616 888 4.84E-79 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Pfam PF01043 SecA preprotein cross-linking domain 235 347 3.9E-37 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Pfam PF02810 SEC-C motif 880 897 4.1E-9 T 14-10-2018 IPR004027 SEC-C motif Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Pfam PF07517 SecA DEAD-like domain 9 390 3.8E-128 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Gene3D G3DSA:3.40.50.300 25 404 5.3E-175 T 14-10-2018 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 SMART SM00957 8 391 3.8E-288 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 328 350 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 172 192 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 119 129 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 365 382 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 103 117 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 65 89 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 PRINTS PR00906 SecA protein signature 402 415 4.9E-67 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 Gene3D G3DSA:3.40.50.300 406 615 1.5E-83 T 14-10-2018 Atu3520 50812a99c02d53988fa33eea68aa54a0 902 SUPERFAMILY SSF52540 8 404 3.99E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 Gene3D G3DSA:1.10.1740.10 1 65 2.5E-23 T 14-10-2018 Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 Pfam PF04542 Sigma-70 region 2 12 74 1.3E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 155 1.4E-18 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 Pfam PF08281 Sigma-70, region 4 102 153 5.6E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 SUPERFAMILY SSF88659 98 157 1.11E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 SUPERFAMILY SSF88946 9 87 1.65E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu1485 1368fc748c643361d88c8aac2fe60cf0 168 Gene3D G3DSA:1.10.10.10 96 162 1.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5025 31025bd8c5af79ba963924725d5fb0b8 84 Pfam PF13384 Homeodomain-like domain 16 41 1.5E-8 T 14-10-2018 Atu5025 31025bd8c5af79ba963924725d5fb0b8 84 SUPERFAMILY SSF46689 14 46 2.6E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5025 31025bd8c5af79ba963924725d5fb0b8 84 Gene3D G3DSA:1.10.10.60 6 51 7.9E-9 T 14-10-2018 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 358 368 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 489 2.2E-11 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 SUPERFAMILY SSF51905 7 381 2.43E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3897 c9be0b99e0f047de508fbed076d29f40 507 Pfam PF01266 FAD dependent oxidoreductase 8 362 6.5E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 SUPERFAMILY SSF54373 232 325 3.27E-7 T 14-10-2018 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 Gene3D G3DSA:3.50.50.60 8 372 3.5E-133 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3897 c9be0b99e0f047de508fbed076d29f40 507 Gene3D G3DSA:1.10.8.870 399 467 2.5E-22 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 Gene3D G3DSA:3.30.9.10 85 326 3.5E-133 T 14-10-2018 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 1.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 1.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 1.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 1.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 1.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3897 c9be0b99e0f047de508fbed076d29f40 507 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 1.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu6007 e73683647faef2dd6ae72a34777acbb3 344 SUPERFAMILY SSF53254 14 85 9.21E-6 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PIRSF PIRSF036951 1 319 9.8E-196 T 14-10-2018 IPR015845 Agropine synthesis reductase GO:0016491|GO:0052007|GO:0055114 Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 225 7.2E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 107 7.2E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 172 7.2E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 254 7.2E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 256 273 7.2E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 SUPERFAMILY SSF51735 89 302 2.57E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu6007 e73683647faef2dd6ae72a34777acbb3 344 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 222 250 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu6007 e73683647faef2dd6ae72a34777acbb3 344 Pfam PF00106 short chain dehydrogenase 90 274 8.0E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 85 1.1E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu6007 e73683647faef2dd6ae72a34777acbb3 344 Gene3D G3DSA:3.40.50.720 84 325 9.4E-48 T 14-10-2018 Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 235 254 2.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 172 2.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 215 223 2.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6007 e73683647faef2dd6ae72a34777acbb3 344 Gene3D G3DSA:3.40.50.1240 7 83 4.2E-5 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 SUPERFAMILY SSF47090 211 262 1.96E-9 T 14-10-2018 IPR036365 PGBD-like superfamily Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 Gene3D G3DSA:1.10.101.10 201 268 1.3E-7 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 SUPERFAMILY SSF141523 28 137 9.02E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 Pfam PF03734 L,D-transpeptidase catalytic domain 31 136 2.3E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 Gene3D G3DSA:2.40.440.10 29 144 1.1E-27 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 Pfam PF01471 Putative peptidoglycan binding domain 216 261 6.0E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu1293 c61a7e90cd3fb1b6104ca6472b937d1a 412 PIRSF PIRSF029342 1 412 1.1E-164 T 14-10-2018 IPR016915 Uncharacterised conserved protein UCP029342 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 677 1.1E-27 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 529 1.1E-27 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 656 1.1E-27 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 755 1.1E-27 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 739 1.1E-27 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 363 377 1.1E-27 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Gene3D G3DSA:3.40.1110.10 526 652 1.4E-88 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 246 829 2.8E-185 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00943 Copper-transporting ATPase signature 436 450 3.4E-10 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00943 Copper-transporting ATPase signature 697 714 3.4E-10 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00943 Copper-transporting ATPase signature 283 302 3.4E-10 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00943 Copper-transporting ATPase signature 303 321 3.4E-10 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 PRINTS PR00943 Copper-transporting ATPase signature 231 250 3.4E-10 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 517 523 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 SUPERFAMILY SSF81665 270 795 5.89E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Pfam PF00702 haloacid dehalogenase-like hydrolase 513 734 1.9E-45 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 SUPERFAMILY SSF55008 1 58 7.33E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 SUPERFAMILY SSF56784 513 827 4.95E-58 T 14-10-2018 IPR036412 HAD-like superfamily Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 SUPERFAMILY SSF81653 317 413 2.48E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Gene3D G3DSA:3.40.50.1000 496 772 1.4E-88 T 14-10-2018 IPR023214 HAD superfamily Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Gene3D G3DSA:3.30.70.100 1 57 1.4E-14 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Pfam PF00122 E1-E2 ATPase 314 494 4.2E-55 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Gene3D G3DSA:2.70.150.20 306 418 6.5E-41 T 14-10-2018 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 Pfam PF00403 Heavy-metal-associated domain 1 55 5.1E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 285 799 2.9E-88 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atu0937 f72ebb05506742bd4a2d5bb974ba2263 841 SUPERFAMILY SSF55008 60 126 2.62E-5 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82693 135 330 7.32E-26 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:3.30.70.1430 567 665 0.0 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:3.30.70.1430 38 814 0.0 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82714 720 804 3.66E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:3.30.2090.10 718 806 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82714 183 271 3.01E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:3.30.70.1440 666 862 0.0 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:1.20.1640.10 513 1019 0.0 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82866 802 1025 2.62E-45 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3202 c2081cd30409793ffc401ce56e587586 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82693 565 668 2.04E-31 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82693 38 129 2.22E-26 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 SUPERFAMILY SSF82866 297 497 2.49E-49 T 14-10-2018 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3202 c2081cd30409793ffc401ce56e587586 1044 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.8E-104 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2777 5d2e0059a05d5f7fb0985f1ea214101d 162 Pfam PF02410 Ribosomal silencing factor during starvation 56 151 1.0E-26 T 14-10-2018 Atu2777 5d2e0059a05d5f7fb0985f1ea214101d 162 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 54 151 2.2E-35 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Atu2777 5d2e0059a05d5f7fb0985f1ea214101d 162 Gene3D G3DSA:3.30.460.10 49 161 2.6E-37 T 14-10-2018 Atu2777 5d2e0059a05d5f7fb0985f1ea214101d 162 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 50 152 24.867 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Atu2777 5d2e0059a05d5f7fb0985f1ea214101d 162 SUPERFAMILY SSF81301 53 156 3.6E-36 T 14-10-2018 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 SUPERFAMILY SSF56645 12 214 1.07E-27 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 100 2.9E-7 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 367 6.3E-8 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 SUPERFAMILY SSF47203 231 375 2.42E-12 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 Gene3D G3DSA:1.20.140.10 229 378 1.8E-17 T 14-10-2018 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 Gene3D G3DSA:1.10.540.10 3 117 2.5E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 PIRSF PIRSF016578 1 389 3.8E-19 T 14-10-2018 Atu2572 d452c63c39af81ec5e0fd026c5cc32b8 393 Gene3D G3DSA:2.40.110.10 131 220 1.9E-7 T 14-10-2018 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 SUPERFAMILY SSF51569 12 296 5.23E-62 T 14-10-2018 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 3 296 1.1E-121 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 296 4.1E-46 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 Gene3D G3DSA:3.20.20.70 1 303 1.2E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 SMART SM01130 10 300 4.3E-68 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 10 300 43.842 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 Atu3140 53ebdb04bb21c8d6334898cfc806abda 303 PIRSF PIRSF001365 7 303 2.1E-54 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 SUPERFAMILY SSF55021 3 83 1.75E-16 T 14-10-2018 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 SUPERFAMILY SSF53328 86 282 5.63E-61 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 Pfam PF00551 Formyl transferase 86 263 2.3E-36 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 281 46.936 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PIRSF PIRSF036480 1 282 3.5E-111 T 14-10-2018 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 281 1.7E-97 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 Gene3D G3DSA:3.30.70.260 1 85 1.3E-25 T 14-10-2018 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 Pfam PF13740 ACT domain 4 77 3.5E-5 T 14-10-2018 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 2.3E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 2.3E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 2.3E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 2.3E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 2.3E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 2.3E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4231 14b6cd13a854d5403b74cc96d4ac49b3 294 Gene3D G3DSA:3.40.50.170 86 282 4.8E-69 T 14-10-2018 Atu3586 b51833db7b04ee880f201bcd0ded3f4b 510 Gene3D G3DSA:3.90.226.10 3 256 1.8E-94 T 14-10-2018 Atu3586 b51833db7b04ee880f201bcd0ded3f4b 510 SUPERFAMILY SSF52096 5 249 1.96E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3586 b51833db7b04ee880f201bcd0ded3f4b 510 SUPERFAMILY SSF52096 223 510 2.24E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3586 b51833db7b04ee880f201bcd0ded3f4b 510 Gene3D G3DSA:3.90.226.10 257 510 4.3E-94 T 14-10-2018 Atu3586 b51833db7b04ee880f201bcd0ded3f4b 510 Pfam PF01039 Carboxyl transferase domain 27 508 1.6E-190 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 SMART SM00052 710 955 1.1E-99 T 14-10-2018 IPR001633 EAL domain Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 SMART SM00267 527 700 3.3E-45 T 14-10-2018 IPR000160 GGDEF domain Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Pfam PF00563 EAL domain 716 950 2.9E-68 T 14-10-2018 IPR001633 EAL domain Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Gene3D G3DSA:2.10.70.100 483 529 3.1E-11 T 14-10-2018 Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 SUPERFAMILY SSF141868 715 964 9.55E-79 T 14-10-2018 IPR035919 EAL domain superfamily Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Pfam PF07696 7TMR-DISM extracellular 2 89 182 7.3E-5 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Gene3D G3DSA:3.20.20.450 713 970 1.6E-90 T 14-10-2018 IPR035919 EAL domain superfamily Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Gene3D G3DSA:3.30.450.20 409 476 3.7E-12 T 14-10-2018 Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 SUPERFAMILY SSF55073 543 700 9.42E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 SUPERFAMILY SSF55785 419 528 2.42E-19 T 14-10-2018 IPR035965 PAS domain superfamily Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Gene3D G3DSA:3.30.70.270 532 712 1.3E-45 T 14-10-2018 Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 457 534 1.5E-8 T 14-10-2018 IPR000014 PAS domain Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Pfam PF08447 PAS fold 436 521 4.0E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 Pfam PF00990 Diguanylate cyclase, GGDEF domain 539 696 7.8E-38 T 14-10-2018 IPR000160 GGDEF domain Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 537 698 8.1E-32 T 14-10-2018 IPR000160 GGDEF domain Atu0784 1763b22a72d503adddb10e1c8cdce85b 971 SMART SM00086 485 527 2.8E-8 T 14-10-2018 IPR001610 PAC motif Atu3024 ac0682b94fa3c5a9dff0e75a6d303906 509 Gene3D G3DSA:3.40.190.10 45 414 1.1E-161 T 14-10-2018 Atu3024 ac0682b94fa3c5a9dff0e75a6d303906 509 Gene3D G3DSA:3.40.190.10 148 503 1.1E-161 T 14-10-2018 Atu3024 ac0682b94fa3c5a9dff0e75a6d303906 509 SUPERFAMILY SSF53850 17 504 7.44E-102 T 14-10-2018 Atu3024 ac0682b94fa3c5a9dff0e75a6d303906 509 Pfam PF01547 Bacterial extracellular solute-binding protein 47 355 1.1E-8 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4411 38a2700612d362eee6852a233cbead80 287 Gene3D G3DSA:1.10.10.10 1 87 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4411 38a2700612d362eee6852a233cbead80 287 SUPERFAMILY SSF46785 1 103 3.25E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4411 38a2700612d362eee6852a233cbead80 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4411 38a2700612d362eee6852a233cbead80 287 Pfam PF03466 LysR substrate binding domain 88 284 4.8E-35 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4411 38a2700612d362eee6852a233cbead80 287 SUPERFAMILY SSF53850 90 284 8.33E-35 T 14-10-2018 Atu4411 38a2700612d362eee6852a233cbead80 287 Gene3D G3DSA:3.40.190.290 91 286 4.2E-30 T 14-10-2018 Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 Gene3D G3DSA:1.10.10.10 1 88 7.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 Pfam PF03466 LysR substrate binding domain 88 294 1.1E-30 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 SUPERFAMILY SSF46785 1 84 1.78E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.3E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 Gene3D G3DSA:3.40.190.290 91 299 3.6E-31 T 14-10-2018 Atu4279 0b46c9283288dc2a7c5a025ab029e2c3 301 SUPERFAMILY SSF53850 89 298 3.08E-29 T 14-10-2018 Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 Pfam PF00005 ABC transporter 23 170 9.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 SUPERFAMILY SSF52540 4 228 4.47E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 Gene3D G3DSA:3.40.50.300 2 240 5.1E-55 T 14-10-2018 Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 Pfam PF00005 ABC transporter 274 427 3.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 Gene3D G3DSA:3.40.50.300 259 504 6.7E-41 T 14-10-2018 Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 SUPERFAMILY SSF52540 271 487 8.48E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 SMART SM00382 30 226 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3880 4dd4bf60ce5cc2002f2d1a3b61dc0245 506 SMART SM00382 281 476 2.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4354 dab5e1e51d6a0f74148fc1a796b00167 556 SUPERFAMILY SSF56300 9 385 5.28E-26 T 14-10-2018 Atu4354 dab5e1e51d6a0f74148fc1a796b00167 556 Gene3D G3DSA:3.60.21.10 192 391 4.1E-27 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu4354 dab5e1e51d6a0f74148fc1a796b00167 556 Gene3D G3DSA:3.60.21.10 7 140 1.4E-13 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu4354 dab5e1e51d6a0f74148fc1a796b00167 556 Pfam PF00149 Calcineurin-like phosphoesterase 8 122 1.2E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SMART SM00532 15 483 1.2E-226 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 339 426 9.9E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:3.30.470.90 84 334 5.5E-93 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 650 722 9.6E-12 T 14-10-2018 IPR001357 BRCT domain Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Pfam PF12826 Helix-hairpin-helix motif 556 629 1.5E-16 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:2.40.50.140 335 419 1.3E-32 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 129 158 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SUPERFAMILY SSF50249 334 427 2.57E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:1.10.150.20 552 634 9.0E-23 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SUPERFAMILY SSF52113 647 722 3.18E-18 T 14-10-2018 IPR036420 BRCT domain superfamily Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 436 469 1.7E-7 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SUPERFAMILY SSF56091 13 333 1.81E-107 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Hamap MF_01588 DNA ligase [ligA]. 14 722 49.315 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:2.20.70.80 420 466 1.3E-11 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 718 1.7E-221 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SMART SM00278 558 577 280.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SMART SM00278 526 545 79.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SMART SM00278 600 619 1.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:3.40.50.10190 635 723 4.7E-29 T 14-10-2018 IPR036420 BRCT domain superfamily Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 348 363 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SMART SM00292 648 724 3.5E-10 T 14-10-2018 IPR001357 BRCT domain Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:1.10.287.610 11 83 6.0E-20 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 SUPERFAMILY SSF47781 432 634 2.76E-45 T 14-10-2018 IPR010994 RuvA domain 2-like Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Gene3D G3DSA:1.10.150.20 467 550 1.3E-20 T 14-10-2018 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 16 335 2.6E-112 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Atu2082 a6b5bbd053ccdc2b8ab37eccecfc527a 724 PIRSF PIRSF001604 8 724 2.0E-219 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 Gene3D G3DSA:1.20.1250.20 7 203 4.4E-31 T 14-10-2018 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 PRINTS PR01035 Tetracycline resistance protein signature 47 66 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 PRINTS PR01035 Tetracycline resistance protein signature 328 351 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 PRINTS PR01035 Tetracycline resistance protein signature 136 158 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 PRINTS PR01035 Tetracycline resistance protein signature 18 34 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 PRINTS PR01035 Tetracycline resistance protein signature 271 292 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 Pfam PF07690 Major Facilitator Superfamily 12 348 1.3E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 SUPERFAMILY SSF103473 7 390 1.07E-60 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2361 48ac11ec12e2e94ac36357810301a2d7 400 Gene3D G3DSA:1.20.1250.20 205 392 3.8E-18 T 14-10-2018 Atu1352 c90386a1749ea7ad1c888470af3e388e 261 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 250 2.3E-90 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Atu1352 c90386a1749ea7ad1c888470af3e388e 261 Gene3D G3DSA:3.20.20.20 1 259 1.4E-95 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu1352 c90386a1749ea7ad1c888470af3e388e 261 Pfam PF00809 Pterin binding enzyme 1 236 1.1E-75 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu1352 c90386a1749ea7ad1c888470af3e388e 261 SUPERFAMILY SSF51717 1 252 4.84E-88 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu1352 c90386a1749ea7ad1c888470af3e388e 261 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 75 1.3E-15 T 14-10-2018 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 Gene3D G3DSA:3.40.50.720 309 374 1.1E-14 T 14-10-2018 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 Gene3D G3DSA:3.40.50.720 167 268 5.9E-24 T 14-10-2018 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 Gene3D G3DSA:3.40.50.720 6 160 3.4E-27 T 14-10-2018 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 Pfam PF03275 UDP-galactopyranose mutase 151 350 6.7E-77 T 14-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 SUPERFAMILY SSF51971 6 369 5.47E-50 T 14-10-2018 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 7 365 3.6E-94 T 14-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Atu3975 a1a1270b63d770599987a7c6307c38ee 385 SUPERFAMILY SSF54373 250 317 1.02E-25 T 14-10-2018 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Pfam PF01751 Toprim domain 3 115 3.6E-23 T 14-10-2018 IPR006171 TOPRIM domain Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Gene3D G3DSA:1.10.460.10 140 564 1.7E-164 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 SMART SM00493 1 101 4.0E-25 T 14-10-2018 IPR006171 TOPRIM domain Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 SUPERFAMILY SSF57783 606 642 2.04E-8 T 14-10-2018 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 SMART SM00436 106 194 1.3E-46 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Pfam PF13368 Topoisomerase C-terminal repeat 788 838 4.2E-17 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Pfam PF13368 Topoisomerase C-terminal repeat 662 716 2.5E-13 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Pfam PF13368 Topoisomerase C-terminal repeat 720 772 1.4E-17 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 SUPERFAMILY SSF56712 1 614 4.58E-183 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Gene3D G3DSA:3.40.50.140 1 136 6.4E-47 T 14-10-2018 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 5.9E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 487 501 5.9E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 5.9E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 5.9E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 5.9E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Gene3D G3DSA:2.70.20.10 186 471 1.7E-164 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 SMART SM00437 248 524 1.3E-100 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Gene3D G3DSA:1.10.290.10 256 391 1.7E-164 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 741 53.191 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 641 4.4E-232 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 607 642 2.7E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Atu1304 87b6f0ead06ab84eba57cc1b16dc199b 892 Pfam PF01131 DNA topoisomerase 130 561 1.4E-119 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 Pfam PF04542 Sigma-70 region 2 27 92 2.7E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 Gene3D G3DSA:1.10.10.10 115 176 5.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 173 5.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 Pfam PF08281 Sigma-70, region 4 118 169 4.2E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 Gene3D G3DSA:1.10.1740.10 15 94 5.0E-19 T 14-10-2018 Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 SUPERFAMILY SSF88659 112 174 1.7E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu5490 b2f5c692d6082168985a8fb1497d4c22 180 SUPERFAMILY SSF88946 27 94 3.4E-17 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu2131 3d067f4a7a73dab5679fdedcda5094a5 112 Pfam PF04273 Putative phosphatase (DUF442) 2 105 1.1E-28 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 Atu2131 3d067f4a7a73dab5679fdedcda5094a5 112 SUPERFAMILY SSF52799 2 102 4.03E-7 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu2131 3d067f4a7a73dab5679fdedcda5094a5 112 Gene3D G3DSA:3.90.190.10 1 110 1.6E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu2131 3d067f4a7a73dab5679fdedcda5094a5 112 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 104 1.6E-27 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 Atu1409 1687c2a1991d88cbd03a999d5c2eda76 162 SUPERFAMILY SSF51182 1 156 3.07E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu1409 1687c2a1991d88cbd03a999d5c2eda76 162 Pfam PF04115 Ureidoglycolate lyase 1 135 6.6E-23 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atu1409 1687c2a1991d88cbd03a999d5c2eda76 162 Gene3D G3DSA:2.60.120.480 1 159 1.2E-30 T 14-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atu0409 93b3920a3c243cef9d709e2118c13ecd 729 Gene3D G3DSA:2.40.170.20 186 729 6.7E-116 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atu0409 93b3920a3c243cef9d709e2118c13ecd 729 Pfam PF00593 TonB dependent receptor 252 726 2.9E-58 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu0409 93b3920a3c243cef9d709e2118c13ecd 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 726 5.7E-108 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Atu0409 93b3920a3c243cef9d709e2118c13ecd 729 SUPERFAMILY SSF56935 28 729 2.65E-130 T 14-10-2018 Atu0409 93b3920a3c243cef9d709e2118c13ecd 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 174 4.2E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu0409 93b3920a3c243cef9d709e2118c13ecd 729 Gene3D G3DSA:2.170.130.10 47 185 3.1E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu3219 fd4135f6074eded2069f25d34c3813c5 603 Gene3D G3DSA:3.50.30.80 387 550 6.0E-34 T 14-10-2018 Atu3219 fd4135f6074eded2069f25d34c3813c5 603 Pfam PF00920 Dehydratase family 50 581 4.4E-150 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu3219 fd4135f6074eded2069f25d34c3813c5 603 SUPERFAMILY SSF143975 13 384 7.98E-114 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu3219 fd4135f6074eded2069f25d34c3813c5 603 SUPERFAMILY SSF52016 387 588 1.1E-46 T 14-10-2018 Atu3219 fd4135f6074eded2069f25d34c3813c5 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 133 143 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu0752 a57d79459d6269473e77a01a1a5df89f 398 Pfam PF06224 Winged helix DNA-binding domain 38 382 2.2E-78 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 Gene3D G3DSA:3.20.20.70 1 320 1.8E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 TIGRFAM TIGR00874 talAB: transaldolase 4 315 4.8E-138 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 311 3.1E-96 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 SUPERFAMILY SSF51569 1 315 1.88E-106 T 14-10-2018 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 Hamap MF_00492 Transaldolase [tal]. 2 316 50.631 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atu4464 44be131d51244286c67ceb2c373ba2c1 321 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 PIRSF PIRSF036397 1 849 0.0 T 14-10-2018 IPR009219 Bacteriophytochrome, CheY-like Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SMART SM00448 732 840 5.3E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Pfam PF00072 Response regulator receiver domain 734 838 4.4E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Gene3D G3DSA:3.40.50.2300 729 849 2.8E-35 T 14-10-2018 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Pfam PF08446 PAS fold 13 118 1.1E-27 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SUPERFAMILY SSF52172 731 844 2.7E-19 T 14-10-2018 IPR011006 CheY-like superfamily Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Pfam PF00360 Phytochrome region 322 499 3.0E-57 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Gene3D G3DSA:3.30.565.10 575 710 2.7E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Gene3D G3DSA:3.30.450.40 12 472 4.1E-165 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Pfam PF07536 HWE histidine kinase 520 600 4.5E-21 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Pfam PF01590 GAF domain 142 302 4.5E-19 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Gene3D G3DSA:3.30.450.20 17 245 4.1E-165 T 14-10-2018 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SUPERFAMILY SSF55781 127 306 1.13E-56 T 14-10-2018 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 Gene3D G3DSA:3.30.450.270 313 489 4.1E-165 T 14-10-2018 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SUPERFAMILY SSF55781 292 495 3.05E-52 T 14-10-2018 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SUPERFAMILY SSF55785 6 118 9.94E-31 T 14-10-2018 IPR035965 PAS domain superfamily Atu2165 c6ffc4588bb60af760557b2f789208ca 850 PRINTS PR01033 Phytochrome signature 459 477 1.7E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 PRINTS PR01033 Phytochrome signature 425 444 1.7E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 PRINTS PR01033 Phytochrome signature 156 175 1.7E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 PRINTS PR01033 Phytochrome signature 242 263 1.7E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 PRINTS PR01033 Phytochrome signature 340 360 1.7E-17 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SMART SM00065 141 314 1.9E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu2165 c6ffc4588bb60af760557b2f789208ca 850 SMART SM00911 520 600 9.2E-28 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu4241 38bf46765a7d556cf8788b425a2765e8 488 Pfam PF00171 Aldehyde dehydrogenase family 17 472 1.2E-160 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4241 38bf46765a7d556cf8788b425a2765e8 488 SUPERFAMILY SSF53720 2 476 3.14E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4241 38bf46765a7d556cf8788b425a2765e8 488 Gene3D G3DSA:3.40.605.10 17 472 5.7E-162 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4241 38bf46765a7d556cf8788b425a2765e8 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu4241 38bf46765a7d556cf8788b425a2765e8 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu4241 38bf46765a7d556cf8788b425a2765e8 488 Gene3D G3DSA:3.40.309.10 255 444 5.7E-162 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 Gene3D G3DSA:1.10.10.10 3 169 3.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 SMART SM00347 54 154 1.3E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 SUPERFAMILY SSF46785 24 168 1.63E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 Pfam PF12802 MarR family 68 117 4.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 110 7.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 130 7.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 7.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 94 7.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4504 fd6b9f34ecfb2dc0e98fa6f478cfb53c 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 93 127 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Atu2187 37e6f44f205a66ef7ab18999d228f441 96 SUPERFAMILY SSF46785 4 93 7.24E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2187 37e6f44f205a66ef7ab18999d228f441 96 Gene3D G3DSA:1.10.10.10 2 96 6.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2187 37e6f44f205a66ef7ab18999d228f441 96 Pfam PF12840 Helix-turn-helix domain 5 74 3.4E-13 T 14-10-2018 Atu2187 37e6f44f205a66ef7ab18999d228f441 96 SMART SM00418 5 94 1.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 Gene3D G3DSA:3.40.50.300 29 247 1.2E-61 T 14-10-2018 Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 SUPERFAMILY SSF52540 29 268 2.72E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 SMART SM00382 53 237 2.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 Pfam PF08402 TOBE domain 299 373 9.4E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 SUPERFAMILY SSF50331 262 373 9.07E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 Pfam PF00005 ABC transporter 45 187 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 Gene3D G3DSA:2.40.50.140 306 366 5.8E-9 T 14-10-2018 Atu5248 39dd5af263f8a63bcbe41b5dd81140ad 376 Gene3D G3DSA:2.40.50.940 248 370 5.8E-9 T 14-10-2018 Atu4082 bc895e104a37694faa568ee6f007e676 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.5E-15 T 14-10-2018 Atu4082 bc895e104a37694faa568ee6f007e676 153 Gene3D G3DSA:3.30.70.920 55 138 1.5E-18 T 14-10-2018 Atu4082 bc895e104a37694faa568ee6f007e676 153 Gene3D G3DSA:1.10.10.10 2 54 7.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4082 bc895e104a37694faa568ee6f007e676 153 SMART SM00344 2 111 1.7E-42 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu4082 bc895e104a37694faa568ee6f007e676 153 SUPERFAMILY SSF54909 62 149 2.95E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4082 bc895e104a37694faa568ee6f007e676 153 SUPERFAMILY SSF46785 2 92 6.64E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4082 bc895e104a37694faa568ee6f007e676 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.3E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4082 bc895e104a37694faa568ee6f007e676 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.3E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4082 bc895e104a37694faa568ee6f007e676 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.3E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4082 bc895e104a37694faa568ee6f007e676 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 140 4.7E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu2679 29174d3a37cc021edcbfd1d9ac45b8be 216 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 35 192 7.4E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Atu2679 29174d3a37cc021edcbfd1d9ac45b8be 216 SUPERFAMILY SSF52266 27 206 9.16E-45 T 14-10-2018 Atu2679 29174d3a37cc021edcbfd1d9ac45b8be 216 Gene3D G3DSA:3.40.50.1110 31 212 4.8E-62 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 257 3.3E-81 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 165 179 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 Gene3D G3DSA:3.40.50.150 36 258 1.5E-77 T 14-10-2018 Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 SUPERFAMILY SSF53335 22 254 2.92E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 257 1.2E-87 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Atu0320 d6bae71dd6f2fd93c83b0b7fcd48f14a 258 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 257 37.522 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Gene3D G3DSA:3.30.300.20 382 464 3.9E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 SUPERFAMILY SSF52540 138 468 2.13E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 PIRSF PIRSF006485 1 470 6.1E-156 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Gene3D G3DSA:3.40.50.300 199 378 7.6E-45 T 14-10-2018 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Pfam PF01926 50S ribosome-binding GTPase 206 324 4.4E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.0E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 5.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Gene3D G3DSA:3.40.50.300 4 168 1.3E-42 T 14-10-2018 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 462 1.2E-164 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 5.5E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 203 370 4.3E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 462 4.8E-31 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 SUPERFAMILY SSF52540 3 171 3.89E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2300 69be3d20a65082e7fd58d9c6c9034b04 476 Hamap MF_00195 GTPase Der [der]. 2 465 36.21 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 SMART SM00382 28 219 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 Gene3D G3DSA:2.40.50.140 281 320 6.0E-20 T 14-10-2018 Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 Gene3D G3DSA:3.40.50.300 4 221 1.4E-66 T 14-10-2018 Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 Gene3D G3DSA:2.40.50.940 222 280 6.0E-20 T 14-10-2018 Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 Pfam PF08402 TOBE domain 274 335 2.4E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 SUPERFAMILY SSF52540 4 242 3.0E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 SUPERFAMILY SSF50331 236 336 2.26E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5083 b1e8ecdec7c538d987d639eccbbfdeb6 371 Pfam PF00005 ABC transporter 20 161 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4145 46b47f4751c2e87ee3732f2463623760 274 SUPERFAMILY SSF53187 20 253 1.13E-22 T 14-10-2018 Atu4145 46b47f4751c2e87ee3732f2463623760 274 Gene3D G3DSA:3.40.630.40 18 273 1.1E-20 T 14-10-2018 Atu4145 46b47f4751c2e87ee3732f2463623760 274 Pfam PF05013 N-formylglutamate amidohydrolase 26 238 2.4E-31 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase Atu0325 d23e679f43a58981a3455bb6de7742a3 399 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 25 360 2.4E-87 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Atu0325 d23e679f43a58981a3455bb6de7742a3 399 SUPERFAMILY SSF102114 16 397 1.57E-107 T 14-10-2018 Atu0325 d23e679f43a58981a3455bb6de7742a3 399 SMART SM00729 22 242 1.1E-52 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu0325 d23e679f43a58981a3455bb6de7742a3 399 Pfam PF06969 HemN C-terminal domain 328 388 7.8E-11 T 14-10-2018 IPR010723 HemN, C-terminal Atu0325 d23e679f43a58981a3455bb6de7742a3 399 Pfam PF04055 Radical SAM superfamily 28 196 6.6E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu0325 d23e679f43a58981a3455bb6de7742a3 399 Gene3D G3DSA:3.80.30.20 6 322 1.1E-90 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 SUPERFAMILY SSF53850 89 294 1.71E-51 T 14-10-2018 Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 Gene3D G3DSA:1.10.10.10 1 88 9.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 Pfam PF03466 LysR substrate binding domain 87 290 1.1E-49 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 SUPERFAMILY SSF46785 1 111 1.01E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 Gene3D G3DSA:3.40.190.10 162 261 3.6E-71 T 14-10-2018 Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.9E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5187 5248cf2f6677b72b12229fd16eb010ca 308 Gene3D G3DSA:3.40.190.10 90 287 3.6E-71 T 14-10-2018 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 Pfam PF01016 Ribosomal L27 protein 2 81 7.1E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 Gene3D G3DSA:2.40.50.100 21 89 3.5E-31 T 14-10-2018 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 6.8E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 SUPERFAMILY SSF110324 2 83 1.06E-34 T 14-10-2018 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.769 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 85 5.0E-20 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2784 c2203e870be43ad6cbbc20a08a14e136 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2575 6d47350d41b9d87c511cb2cf4243694f 818 SUPERFAMILY SSF49303 737 812 2.3E-10 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Atu2575 6d47350d41b9d87c511cb2cf4243694f 818 Gene3D G3DSA:2.60.120.260 29 191 3.2E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Atu2575 6d47350d41b9d87c511cb2cf4243694f 818 SUPERFAMILY SSF49785 13 188 1.05E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Atu2575 6d47350d41b9d87c511cb2cf4243694f 818 SUPERFAMILY SSF49303 201 283 6.23E-8 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Atu2575 6d47350d41b9d87c511cb2cf4243694f 818 SUPERFAMILY SSF51445 280 626 1.14E-73 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu2575 6d47350d41b9d87c511cb2cf4243694f 818 Gene3D G3DSA:3.20.20.80 281 624 6.7E-69 T 14-10-2018 Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 Gene3D G3DSA:3.40.630.10 16 406 4.1E-129 T 14-10-2018 Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 SUPERFAMILY SSF55031 216 331 2.22E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 SUPERFAMILY SSF53187 4 409 3.59E-79 T 14-10-2018 Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 Pfam PF07687 Peptidase dimerisation domain 213 315 2.5E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 Pfam PF01546 Peptidase family M20/M25/M40 79 406 6.4E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 PIRSF PIRSF001235 4 413 4.2E-117 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 Gene3D G3DSA:3.30.70.360 216 330 4.1E-129 T 14-10-2018 Atu3070 1576a16e4c3d16f4295f90a8afa5aae6 413 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 410 2.1E-107 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Atu4683 4909892d8d347dc63241329e5c8465e8 569 Pfam PF01989 Protein of unknown function DUF126 32 106 2.4E-29 T 14-10-2018 IPR002840 Aconitase X swivel domain, putative Atu4683 4909892d8d347dc63241329e5c8465e8 569 Gene3D G3DSA:3.30.499.10 427 559 2.0E-6 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atu4683 4909892d8d347dc63241329e5c8465e8 569 PIRSF PIRSF036630 7 569 0.0 T 14-10-2018 IPR012047 Aconitase X Atu4683 4909892d8d347dc63241329e5c8465e8 569 Gene3D G3DSA:3.50.30.10 10 145 1.0E-33 T 14-10-2018 Atu4683 4909892d8d347dc63241329e5c8465e8 569 Pfam PF04412 Protein of unknown function (DUF521) 158 553 8.4E-137 T 14-10-2018 IPR007506 Aconitase X catalytic domain, putative Atu4683 4909892d8d347dc63241329e5c8465e8 569 SUPERFAMILY SSF52016 13 139 1.33E-36 T 14-10-2018 Atu1410 6635d829e3d55a90ac5e9d7ccc6801cd 240 SMART SM00382 30 212 3.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1410 6635d829e3d55a90ac5e9d7ccc6801cd 240 SUPERFAMILY SSF52540 5 233 1.13E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1410 6635d829e3d55a90ac5e9d7ccc6801cd 240 Gene3D G3DSA:3.40.50.300 2 236 3.4E-55 T 14-10-2018 Atu1410 6635d829e3d55a90ac5e9d7ccc6801cd 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1410 6635d829e3d55a90ac5e9d7ccc6801cd 240 Pfam PF00005 ABC transporter 22 163 1.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4873 62ee3d0875454b2f0c4818ff66a95eb3 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.3E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4873 62ee3d0875454b2f0c4818ff66a95eb3 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4873 62ee3d0875454b2f0c4818ff66a95eb3 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4873 62ee3d0875454b2f0c4818ff66a95eb3 190 SUPERFAMILY SSF46689 5 74 1.08E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4873 62ee3d0875454b2f0c4818ff66a95eb3 190 Gene3D G3DSA:1.10.357.10 2 172 3.1E-24 T 14-10-2018 Atu4740 d627305a1dddea47ab1565763da8233f 357 SUPERFAMILY SSF50129 1 183 2.13E-45 T 14-10-2018 IPR011032 GroES-like superfamily Atu4740 d627305a1dddea47ab1565763da8233f 357 Gene3D G3DSA:3.90.180.10 9 338 1.3E-97 T 14-10-2018 Atu4740 d627305a1dddea47ab1565763da8233f 357 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 1.7E-19 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu4740 d627305a1dddea47ab1565763da8233f 357 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu4740 d627305a1dddea47ab1565763da8233f 357 SMART SM00829 7 353 4.4E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu4740 d627305a1dddea47ab1565763da8233f 357 SUPERFAMILY SSF51735 148 318 1.31E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4740 d627305a1dddea47ab1565763da8233f 357 Pfam PF00107 Zinc-binding dehydrogenase 184 314 7.0E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu4740 d627305a1dddea47ab1565763da8233f 357 Gene3D G3DSA:3.40.50.720 161 299 1.3E-97 T 14-10-2018 Atu3230 78164bb4eb1c33daeffbf2b0738bb30a 254 PIRSF PIRSF034285 1 254 2.8E-91 T 14-10-2018 IPR017026 Inducible mutagenesis protein A Atu3230 78164bb4eb1c33daeffbf2b0738bb30a 254 Gene3D G3DSA:3.40.50.300 52 166 1.8E-19 T 14-10-2018 Atu3230 78164bb4eb1c33daeffbf2b0738bb30a 254 SUPERFAMILY SSF52540 50 166 1.33E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 SUPERFAMILY SSF74650 63 210 4.08E-15 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 SUPERFAMILY SSF51011 568 648 4.96E-18 T 14-10-2018 Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 Gene3D G3DSA:2.60.40.1760 46 212 1.5E-16 T 14-10-2018 Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 Gene3D G3DSA:2.60.40.1180 599 649 5.0E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 Gene3D G3DSA:3.20.20.80 215 598 7.0E-83 T 14-10-2018 Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 SUPERFAMILY SSF51445 217 566 1.86E-47 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu3285 0f0bb50e70b96fcbb34a9cb8d6b1f223 664 Pfam PF01055 Glycosyl hydrolases family 31 209 650 8.8E-67 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SUPERFAMILY SSF52540 799 1007 2.2E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SMART SM00982 1022 1122 3.6E-44 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Gene3D G3DSA:3.30.2060.10 132 218 6.7E-85 T 14-10-2018 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SUPERFAMILY SSF141259 490 565 9.68E-19 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SUPERFAMILY SSF52540 387 487 7.36E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SMART SM01058 497 593 8.1E-44 T 14-10-2018 IPR003711 CarD-like/TRCF domain Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Pfam PF00271 Helicase conserved C-terminal domain 821 926 5.4E-16 T 14-10-2018 IPR001650 Helicase, C-terminal Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1095 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SMART SM00487 617 807 4.4E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Pfam PF02559 CarD-like/TRCF domain 498 591 3.4E-24 T 14-10-2018 IPR003711 CarD-like/TRCF domain Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Gene3D G3DSA:3.40.50.300 559 798 1.9E-213 T 14-10-2018 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Gene3D G3DSA:2.30.30.840 501 558 1.9E-213 T 14-10-2018 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SUPERFAMILY SSF52540 542 801 4.59E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SUPERFAMILY SSF52540 10 353 7.04E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Pfam PF00270 DEAD/DEAH box helicase 623 782 3.7E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Gene3D G3DSA:3.40.50.11180 40 310 6.7E-85 T 14-10-2018 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Pfam PF03461 TRCF domain 1025 1115 1.4E-25 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Gene3D G3DSA:3.40.50.300 498 1007 1.9E-213 T 14-10-2018 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 23 1164 27.212 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SMART SM00490 843 927 1.5E-18 T 14-10-2018 IPR001650 Helicase, C-terminal Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 Gene3D G3DSA:3.90.1150.50 1019 1164 2.4E-35 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Atu1778 1a320b9cfa2dd8a97240402538d05cb8 1165 SUPERFAMILY SSF143517 1011 1161 2.62E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 PIRSF PIRSF015753 4 327 2.8E-134 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 160 5.8E-23 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 SUPERFAMILY SSF47616 178 327 7.8E-37 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 Pfam PF13410 Glutathione S-transferase, C-terminal domain 214 278 7.8E-13 T 14-10-2018 Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 Gene3D G3DSA:3.40.30.130 21 320 1.1E-137 T 14-10-2018 Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 SUPERFAMILY SSF52833 40 165 1.93E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu2261 8fd2efadbbd4bf6bc652705806edc984 330 Gene3D G3DSA:1.20.1050.10 177 287 1.1E-137 T 14-10-2018 Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 251 374 2.1E-17 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 PIRSF PIRSF016578 5 398 1.8E-28 T 14-10-2018 Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 Gene3D G3DSA:2.40.110.10 128 228 7.5E-19 T 14-10-2018 Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 Gene3D G3DSA:1.10.540.10 10 121 3.2E-18 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 Gene3D G3DSA:1.20.140.10 242 394 2.9E-29 T 14-10-2018 Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 SUPERFAMILY SSF56645 21 220 9.56E-32 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu6066 b62fd696e46d4b13e3b67649aa33e143 401 SUPERFAMILY SSF47203 247 393 5.32E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 Pfam PF00005 ABC transporter 25 183 4.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 Gene3D G3DSA:3.40.50.300 3 321 1.2E-98 T 14-10-2018 Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 SMART SM00382 34 241 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 317 1.7E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 SUPERFAMILY SSF52540 5 254 5.79E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 2.7E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4700 fc347f534eba20c9d0a2a4a3f9a4b5e0 324 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 PRINTS PR00625 DnaJ domain signature 25 40 9.3E-31 T 14-10-2018 IPR001623 DnaJ domain Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 PRINTS PR00625 DnaJ domain signature 42 62 9.3E-31 T 14-10-2018 IPR001623 DnaJ domain Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 PRINTS PR00625 DnaJ domain signature 62 81 9.3E-31 T 14-10-2018 IPR001623 DnaJ domain Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 PRINTS PR00625 DnaJ domain signature 7 25 9.3E-31 T 14-10-2018 IPR001623 DnaJ domain Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 SUPERFAMILY SSF49493 262 349 5.49E-26 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 SMART SM00271 4 62 1.4E-30 T 14-10-2018 IPR001623 DnaJ domain Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Gene3D G3DSA:1.10.287.110 1 115 3.1E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Gene3D G3DSA:2.10.230.10 151 211 2.6E-38 T 14-10-2018 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 3.5E-135 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Pfam PF00684 DnaJ central domain 151 211 2.6E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Pfam PF00226 DnaJ domain 5 67 1.6E-26 T 14-10-2018 IPR001623 DnaJ domain Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 SUPERFAMILY SSF46565 1 103 4.32E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Gene3D G3DSA:2.60.260.20 121 253 2.6E-38 T 14-10-2018 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 SUPERFAMILY SSF49493 118 265 5.76E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 41.81 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 SUPERFAMILY SSF57938 138 215 7.46E-22 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Gene3D G3DSA:2.60.260.20 258 366 2.5E-34 T 14-10-2018 Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Atu0121 dc8eb40a5bc4abb72e39fc99a00fbac3 377 Pfam PF01556 DnaJ C terminal domain 125 338 2.5E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Atu1482 6d329be6d459c662340a66ae2786dc49 206 Pfam PF06353 Protein of unknown function (DUF1062) 40 172 7.4E-46 T 14-10-2018 IPR009412 Protein of unknown function DUF1062 Atu1482 6d329be6d459c662340a66ae2786dc49 206 PIRSF PIRSF021719 4 204 2.5E-97 T 14-10-2018 IPR009412 Protein of unknown function DUF1062 Atu1482 6d329be6d459c662340a66ae2786dc49 206 Gene3D G3DSA:3.10.290.10 138 190 2.4E-5 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 SUPERFAMILY SSF53822 76 348 1.12E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 18 63 5.7E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 Pfam PF13377 Periplasmic binding protein-like domain 182 345 3.4E-37 T 14-10-2018 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 19 37 - T 14-10-2018 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 Gene3D G3DSA:3.40.50.2300 70 322 4.5E-65 T 14-10-2018 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 Gene3D G3DSA:3.40.50.2300 174 305 4.5E-65 T 14-10-2018 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 SUPERFAMILY SSF47413 16 74 9.27E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 SMART SM00354 16 86 2.8E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5078 5ce9030e2508d0ea09ee49defe2d2e78 353 Gene3D G3DSA:1.10.260.40 11 69 1.2E-21 T 14-10-2018 Atu3863 4207cfa3fdc0ae36602d9a3a792d4a8a 493 SUPERFAMILY SSF90123 39 246 2.22E-12 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3863 4207cfa3fdc0ae36602d9a3a792d4a8a 493 Gene3D G3DSA:3.40.50.300 277 489 6.4E-16 T 14-10-2018 Atu3863 4207cfa3fdc0ae36602d9a3a792d4a8a 493 Pfam PF06472 ABC transporter transmembrane region 2 3 203 1.1E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu3863 4207cfa3fdc0ae36602d9a3a792d4a8a 493 SUPERFAMILY SSF52540 299 479 3.86E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4469 7f26b3d9288e5b3b16c44152dd39ad94 286 Gene3D G3DSA:1.10.3470.10 37 270 1.3E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4469 7f26b3d9288e5b3b16c44152dd39ad94 286 SUPERFAMILY SSF81345 3 261 5.75E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4469 7f26b3d9288e5b3b16c44152dd39ad94 286 Pfam PF00950 ABC 3 transport family 11 265 2.3E-81 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Atu2390 98c6235952f8641041fbb957df8add33 290 Gene3D G3DSA:1.10.3720.10 78 278 3.1E-13 T 14-10-2018 IPR035906 MetI-like superfamily Atu2390 98c6235952f8641041fbb957df8add33 290 SUPERFAMILY SSF161098 85 262 5.23E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu2390 98c6235952f8641041fbb957df8add33 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 261 3.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4596 58f7a93a4c402a373f0ab7f2dfd45921 329 Gene3D G3DSA:3.40.190.10 113 215 2.7E-71 T 14-10-2018 Atu4596 58f7a93a4c402a373f0ab7f2dfd45921 329 SUPERFAMILY SSF53850 38 261 1.49E-29 T 14-10-2018 Atu4596 58f7a93a4c402a373f0ab7f2dfd45921 329 Pfam PF09084 NMT1/THI5 like 43 254 8.4E-59 T 14-10-2018 IPR015168 SsuA/THI5-like Atu4596 58f7a93a4c402a373f0ab7f2dfd45921 329 Gene3D G3DSA:3.40.190.10 34 306 2.7E-71 T 14-10-2018 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 73 4.7E-6 T 14-10-2018 IPR004176 Clp, N-terminal Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 850 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Gene3D G3DSA:1.10.8.60 766 863 2.9E-10 T 14-10-2018 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 SUPERFAMILY SSF52540 543 833 3.99E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 758 5.4E-36 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Gene3D G3DSA:3.40.50.300 368 541 2.8E-38 T 14-10-2018 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 314 326 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 616 4.3E-27 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 705 719 4.3E-27 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 672 690 4.3E-27 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 643 661 4.3E-27 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 840 1.1E-10 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Gene3D G3DSA:3.40.50.300 548 763 1.9E-62 T 14-10-2018 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Gene3D G3DSA:1.10.1780.10 1 154 5.2E-23 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 SMART SM00382 218 363 4.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 SMART SM00382 594 737 3.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 SMART SM01086 766 858 1.0E-4 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 332 5.1E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 Gene3D G3DSA:3.40.50.300 178 367 2.0E-62 T 14-10-2018 Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 SUPERFAMILY SSF52540 180 494 8.5E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4344 0343406713b4f39e9e0cdc9eec7a305b 892 SUPERFAMILY SSF81923 18 120 3.27E-10 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atu4704 6b3e79b5bcdb3c28fbe14ce1f497e35f 240 Gene3D G3DSA:3.40.50.12500 1 235 5.7E-83 T 14-10-2018 Atu4704 6b3e79b5bcdb3c28fbe14ce1f497e35f 240 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 208 7.8E-14 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu3787 d2fda00310edefa3055db98089082a02 900 SUPERFAMILY SSF55781 517 660 2.18E-8 T 14-10-2018 Atu3787 d2fda00310edefa3055db98089082a02 900 Pfam PF00582 Universal stress protein family 255 370 2.9E-5 T 14-10-2018 IPR006016 UspA Atu3787 d2fda00310edefa3055db98089082a02 900 Gene3D G3DSA:1.10.287.130 660 734 1.7E-17 T 14-10-2018 Atu3787 d2fda00310edefa3055db98089082a02 900 Pfam PF13492 GAF domain 531 649 8.6E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu3787 d2fda00310edefa3055db98089082a02 900 SUPERFAMILY SSF55874 726 891 1.96E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3787 d2fda00310edefa3055db98089082a02 900 Gene3D G3DSA:1.20.120.620 401 505 8.1E-23 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily Atu3787 d2fda00310edefa3055db98089082a02 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 851 869 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3787 d2fda00310edefa3055db98089082a02 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 845 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3787 d2fda00310edefa3055db98089082a02 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 831 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3787 d2fda00310edefa3055db98089082a02 900 PRINTS PR00344 Bacterial sensor protein C-terminal signature 876 889 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3787 d2fda00310edefa3055db98089082a02 900 Gene3D G3DSA:3.40.50.620 240 378 2.1E-8 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3787 d2fda00310edefa3055db98089082a02 900 Gene3D G3DSA:3.40.50.300 23 233 1.3E-99 T 14-10-2018 Atu3787 d2fda00310edefa3055db98089082a02 900 SUPERFAMILY SSF52402 255 378 4.12E-11 T 14-10-2018 Atu3787 d2fda00310edefa3055db98089082a02 900 Gene3D G3DSA:3.30.450.40 514 659 2.2E-34 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu3787 d2fda00310edefa3055db98089082a02 900 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 26 234 5.7E-98 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Atu3787 d2fda00310edefa3055db98089082a02 900 SMART SM00388 668 736 5.1E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3787 d2fda00310edefa3055db98089082a02 900 Gene3D G3DSA:3.30.565.10 747 894 1.1E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3787 d2fda00310edefa3055db98089082a02 900 Pfam PF00512 His Kinase A (phospho-acceptor) domain 669 736 5.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3787 d2fda00310edefa3055db98089082a02 900 SUPERFAMILY SSF47384 662 736 7.06E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu3787 d2fda00310edefa3055db98089082a02 900 SMART SM00387 780 892 1.0E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu3787 d2fda00310edefa3055db98089082a02 900 Pfam PF13493 Domain of unknown function (DUF4118) 405 511 6.9E-28 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Atu3787 d2fda00310edefa3055db98089082a02 900 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 781 890 2.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1114 205164995fded937b21f0f0c9f2420a4 645 SMART SM00267 209 385 0.0012 T 14-10-2018 IPR000160 GGDEF domain Atu1114 205164995fded937b21f0f0c9f2420a4 645 SUPERFAMILY SSF141868 399 639 1.96E-60 T 14-10-2018 IPR035919 EAL domain superfamily Atu1114 205164995fded937b21f0f0c9f2420a4 645 Gene3D G3DSA:3.30.70.270 207 379 1.2E-8 T 14-10-2018 Atu1114 205164995fded937b21f0f0c9f2420a4 645 Gene3D G3DSA:3.20.20.450 397 642 9.4E-63 T 14-10-2018 IPR035919 EAL domain superfamily Atu1114 205164995fded937b21f0f0c9f2420a4 645 SMART SM00052 389 637 1.5E-49 T 14-10-2018 IPR001633 EAL domain Atu1114 205164995fded937b21f0f0c9f2420a4 645 Pfam PF00563 EAL domain 400 631 1.6E-50 T 14-10-2018 IPR001633 EAL domain Atu1114 205164995fded937b21f0f0c9f2420a4 645 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 376 8.9E-7 T 14-10-2018 IPR000160 GGDEF domain Atu2205 e6822f11523b0c49d79163ad125a53d1 165 Gene3D G3DSA:1.10.10.10 29 159 1.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2205 e6822f11523b0c49d79163ad125a53d1 165 Pfam PF12802 MarR family 55 110 7.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2205 e6822f11523b0c49d79163ad125a53d1 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 5.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2205 e6822f11523b0c49d79163ad125a53d1 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 5.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2205 e6822f11523b0c49d79163ad125a53d1 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 5.4E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2205 e6822f11523b0c49d79163ad125a53d1 165 SMART SM00347 46 146 1.1E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2205 e6822f11523b0c49d79163ad125a53d1 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Atu2205 e6822f11523b0c49d79163ad125a53d1 165 SUPERFAMILY SSF46785 21 158 1.71E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4154 a0cec109211f6f5439142be9a37e75a4 317 SUPERFAMILY SSF53850 30 256 1.03E-49 T 14-10-2018 Atu4154 a0cec109211f6f5439142be9a37e75a4 317 Gene3D G3DSA:1.10.8.450 242 274 3.3E-98 T 14-10-2018 Atu4154 a0cec109211f6f5439142be9a37e75a4 317 SMART SM00062 31 247 1.4E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4154 a0cec109211f6f5439142be9a37e75a4 317 Pfam PF13379 NMT1-like family 27 254 4.1E-18 T 14-10-2018 Atu4154 a0cec109211f6f5439142be9a37e75a4 317 Gene3D G3DSA:3.40.190.10 32 305 3.3E-98 T 14-10-2018 Atu4154 a0cec109211f6f5439142be9a37e75a4 317 Gene3D G3DSA:3.40.190.10 111 210 3.3E-98 T 14-10-2018 Atu4154 a0cec109211f6f5439142be9a37e75a4 317 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 32 312 6.6E-69 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 Gene3D G3DSA:3.20.20.70 5 337 1.4E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 15 332 2.0E-127 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PIRSF PIRSF001415 6 337 7.5E-133 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 3.9E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 3.9E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 3.9E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 132 146 3.9E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 3.9E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 3.9E-53 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 SMART SM01004 12 334 2.2E-208 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 SUPERFAMILY SSF51569 12 335 3.91E-129 T 14-10-2018 Atu1161 c5ef177e398c06fe6a25350cea70f1a9 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Atu3264 473f62ab264a78c1213dd736239deb27 283 SUPERFAMILY SSF46785 36 109 7.44E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3264 473f62ab264a78c1213dd736239deb27 283 Gene3D G3DSA:3.30.450.40 109 283 1.6E-33 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu3264 473f62ab264a78c1213dd736239deb27 283 SMART SM00346 36 125 0.0052 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu3264 473f62ab264a78c1213dd736239deb27 283 Pfam PF01614 Bacterial transcriptional regulator 154 276 5.1E-16 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu3264 473f62ab264a78c1213dd736239deb27 283 SUPERFAMILY SSF55781 100 281 4.61E-37 T 14-10-2018 Atu3264 473f62ab264a78c1213dd736239deb27 283 Gene3D G3DSA:1.10.10.10 31 107 4.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3264 473f62ab264a78c1213dd736239deb27 283 Pfam PF09339 IclR helix-turn-helix domain 39 88 2.3E-5 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-55 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 SMART SM01374 1 122 2.3E-87 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.4E-57 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.891 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 SUPERFAMILY SSF50193 1 122 5.23E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1936 f3c26ad809c83ac31d5b63eb044f2d59 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.5E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Atu3464 4ae0b9c137a2bbb848570023549fd013 263 Pfam PF00106 short chain dehydrogenase 5 194 8.7E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 Gene3D G3DSA:3.40.50.720 2 261 2.4E-63 T 14-10-2018 Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PIRSF PIRSF000126 1 262 1.2E-72 T 14-10-2018 Atu3464 4ae0b9c137a2bbb848570023549fd013 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3464 4ae0b9c137a2bbb848570023549fd013 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 193 0.001 T 14-10-2018 Atu3464 4ae0b9c137a2bbb848570023549fd013 263 SUPERFAMILY SSF51735 2 221 3.38E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1154 b8d3769efcbd1248e62bae26fa488897 158 Pfam PF13515 Fusaric acid resistance protein-like 26 147 3.8E-12 T 14-10-2018 Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 Gene3D G3DSA:3.30.1360.40 3 76 6.6E-13 T 14-10-2018 Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 229 520 7.5E-73 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 Gene3D G3DSA:2.40.100.10 404 522 2.0E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 SMART SM00797 249 532 8.5E-116 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 251 516 8.6E-79 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 SUPERFAMILY SSF50891 80 203 2.12E-43 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 SMART SM00796 1 191 2.5E-102 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 SUPERFAMILY SSF160467 2 84 1.44E-11 T 14-10-2018 Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 SUPERFAMILY SSF50891 406 519 2.54E-17 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 190 2.1E-69 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Atu3912 32b7300acdd60633cf4ec0e8b22d180e 536 Gene3D G3DSA:2.40.100.10 78 209 5.2E-57 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 SUPERFAMILY SSF47384 457 530 9.22E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 SMART SM00387 575 698 4.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 Gene3D G3DSA:3.30.565.10 535 703 5.9E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 Gene3D G3DSA:1.10.287.130 460 532 9.2E-19 T 14-10-2018 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 696 6.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 SUPERFAMILY SSF55874 523 696 5.76E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 Pfam PF00512 His Kinase A (phospho-acceptor) domain 470 531 5.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 SMART SM00388 468 534 4.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 641 7.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 655 7.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 676 7.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu6166 93de2a25abe5812f6a2aa88d763618e8 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 695 7.6E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3412 640ac8d603126a79825614c518f02ec7 551 SMART SM00382 34 233 9.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3412 640ac8d603126a79825614c518f02ec7 551 SMART SM00382 310 510 4.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3412 640ac8d603126a79825614c518f02ec7 551 Gene3D G3DSA:3.40.50.300 279 549 6.9E-70 T 14-10-2018 Atu3412 640ac8d603126a79825614c518f02ec7 551 Gene3D G3DSA:3.40.50.300 1 278 6.6E-74 T 14-10-2018 Atu3412 640ac8d603126a79825614c518f02ec7 551 SUPERFAMILY SSF52540 7 255 7.41E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3412 640ac8d603126a79825614c518f02ec7 551 SUPERFAMILY SSF52540 278 520 4.82E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3412 640ac8d603126a79825614c518f02ec7 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 543 1.6E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3412 640ac8d603126a79825614c518f02ec7 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 263 3.0E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3412 640ac8d603126a79825614c518f02ec7 551 Pfam PF00005 ABC transporter 26 183 2.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3412 640ac8d603126a79825614c518f02ec7 551 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3412 640ac8d603126a79825614c518f02ec7 551 Pfam PF00005 ABC transporter 302 453 2.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1444 7eb1174dca50307fccdb7b1c1018a9b1 338 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 17 324 4.3E-103 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Atu1444 7eb1174dca50307fccdb7b1c1018a9b1 338 PIRSF PIRSF006621 14 337 4.4E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atu1444 7eb1174dca50307fccdb7b1c1018a9b1 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 107 125 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atu1444 7eb1174dca50307fccdb7b1c1018a9b1 338 SUPERFAMILY SSF51395 24 324 8.55E-87 T 14-10-2018 Atu1444 7eb1174dca50307fccdb7b1c1018a9b1 338 Gene3D G3DSA:3.20.20.70 21 257 6.9E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1444 7eb1174dca50307fccdb7b1c1018a9b1 338 Pfam PF01207 Dihydrouridine synthase (Dus) 27 327 6.7E-107 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atu1822 947bc8d1781d7a9cadbc0778e6d26ee3 423 SUPERFAMILY SSF101960 23 421 3.27E-98 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Atu1822 947bc8d1781d7a9cadbc0778e6d26ee3 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 172 394 9.0E-66 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Atu1822 947bc8d1781d7a9cadbc0778e6d26ee3 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 140 411 2.3E-88 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 Gene3D G3DSA:3.90.45.10 1 163 3.7E-47 T 14-10-2018 IPR036821 Peptide deformylase superfamily Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 SUPERFAMILY SSF56420 2 161 1.31E-50 T 14-10-2018 IPR036821 Peptide deformylase superfamily Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 Pfam PF01327 Polypeptide deformylase 4 151 9.2E-40 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 PRINTS PR01576 Peptide deformylase signature 100 118 6.4E-25 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 PRINTS PR01576 Peptide deformylase signature 33 62 6.4E-25 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 PRINTS PR01576 Peptide deformylase signature 88 99 6.4E-25 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 PRINTS PR01576 Peptide deformylase signature 119 148 6.4E-25 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 PIRSF PIRSF004749 1 164 1.1E-44 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 159 3.3E-37 T 14-10-2018 IPR023635 Peptide deformylase Atu1550 5a4ba967af68c3e87d01c6cfe26e52b8 164 Hamap MF_00163 Peptide deformylase [def]. 2 161 23.657 T 14-10-2018 IPR023635 Peptide deformylase Atu0385 c4eb5357928524b4a67a32feae178af8 127 Pfam PF00825 Ribonuclease P 8 105 4.6E-22 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atu0385 c4eb5357928524b4a67a32feae178af8 127 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 14 106 1.0E-18 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atu0385 c4eb5357928524b4a67a32feae178af8 127 Gene3D G3DSA:3.30.230.10 3 119 2.3E-23 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu0385 c4eb5357928524b4a67a32feae178af8 127 SUPERFAMILY SSF54211 7 109 1.74E-23 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0385 c4eb5357928524b4a67a32feae178af8 127 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 7 107 1.9E-18 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atu0385 c4eb5357928524b4a67a32feae178af8 127 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 5 116 15.023 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Atu4814 5da292310825444c966f960c9c7b5ee3 202 Gene3D G3DSA:2.160.10.10 30 198 1.1E-29 T 14-10-2018 Atu4814 5da292310825444c966f960c9c7b5ee3 202 SUPERFAMILY SSF51161 28 188 5.96E-34 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu4814 5da292310825444c966f960c9c7b5ee3 202 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 137 169 2.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Atu2644 4cef209dc3959c2b2b9ee33e39119d32 126 SUPERFAMILY SSF81343 11 122 1.96E-29 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2644 4cef209dc3959c2b2b9ee33e39119d32 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 110 5.3E-15 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2644 4cef209dc3959c2b2b9ee33e39119d32 126 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 120 5.8E-31 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Atu2644 4cef209dc3959c2b2b9ee33e39119d32 126 Gene3D G3DSA:1.20.1300.10 11 122 9.8E-27 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2693 53475cbc13be883296a13e786583388a 478 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 205 475 1.4E-95 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Atu2693 53475cbc13be883296a13e786583388a 478 Gene3D G3DSA:1.20.120.140 179 475 3.1E-108 T 14-10-2018 Atu2693 53475cbc13be883296a13e786583388a 478 Pfam PF00448 SRP54-type protein, GTPase domain 276 475 7.2E-72 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2693 53475cbc13be883296a13e786583388a 478 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 450 463 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2693 53475cbc13be883296a13e786583388a 478 Pfam PF02881 SRP54-type protein, helical bundle domain 193 249 1.9E-9 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2693 53475cbc13be883296a13e786583388a 478 SMART SM00963 182 261 4.9E-16 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2693 53475cbc13be883296a13e786583388a 478 SUPERFAMILY SSF47364 177 251 3.93E-20 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Atu2693 53475cbc13be883296a13e786583388a 478 SMART SM00382 275 455 5.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2693 53475cbc13be883296a13e786583388a 478 Gene3D G3DSA:3.40.50.300 276 465 3.1E-108 T 14-10-2018 Atu2693 53475cbc13be883296a13e786583388a 478 SUPERFAMILY SSF52540 274 476 1.21E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2693 53475cbc13be883296a13e786583388a 478 SMART SM00962 276 477 2.3E-110 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2693 53475cbc13be883296a13e786583388a 478 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 205 477 61.55 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Atu6020 70fdd8641ae6e1ec84b1721e82a8b1e5 97 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 11 91 9.5E-23 T 14-10-2018 Atu6020 70fdd8641ae6e1ec84b1721e82a8b1e5 97 SUPERFAMILY SSF54292 13 91 4.57E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu6020 70fdd8641ae6e1ec84b1721e82a8b1e5 97 Gene3D G3DSA:3.10.20.440 2 95 1.6E-12 T 14-10-2018 Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 Gene3D G3DSA:2.40.30.170 82 302 1.2E-54 T 14-10-2018 Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 Gene3D G3DSA:2.40.50.100 94 219 1.2E-54 T 14-10-2018 Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 96 290 2.9E-25 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 Gene3D G3DSA:2.40.420.20 303 369 1.2E-54 T 14-10-2018 Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 Gene3D G3DSA:1.10.287.470 129 185 1.2E-54 T 14-10-2018 Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 SUPERFAMILY SSF111369 85 295 4.45E-31 T 14-10-2018 Atu2055 2e73f7e988c74dfd3187b5652fd4b09e 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 371 4.0E-61 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu5526 70d4ea3df0b2a0fc6583ca04f485590e 367 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 9 356 1.4E-184 T 14-10-2018 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG KEGG: 00920+1.14.14.35|MetaCyc: PWY-6059 Atu5526 70d4ea3df0b2a0fc6583ca04f485590e 367 Gene3D G3DSA:3.20.20.30 6 360 5.3E-104 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu5526 70d4ea3df0b2a0fc6583ca04f485590e 367 Pfam PF00296 Luciferase-like monooxygenase 10 328 8.9E-73 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu5526 70d4ea3df0b2a0fc6583ca04f485590e 367 SUPERFAMILY SSF51679 8 354 3.79E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu8194 1f0b703c3e3155c3579bb78a4a6942a0 146 Pfam PF07681 DoxX 29 103 1.3E-11 T 14-10-2018 IPR032808 DoxX family Atu3622 351797a173ea46a4965b0fcf678c759a 329 SUPERFAMILY SSF52540 37 284 4.35E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3622 351797a173ea46a4965b0fcf678c759a 329 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 7 40 6.4E-18 T 14-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Atu3622 351797a173ea46a4965b0fcf678c759a 329 Pfam PF07728 AAA domain (dynein-related subfamily) 67 191 5.7E-11 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Atu3622 351797a173ea46a4965b0fcf678c759a 329 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 1 326 3.2E-197 T 14-10-2018 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Atu3622 351797a173ea46a4965b0fcf678c759a 329 Gene3D G3DSA:3.40.50.300 51 230 2.5E-25 T 14-10-2018 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 Gene3D G3DSA:3.80.30.20 135 369 3.3E-66 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atu2694 df59cc84561064a5de03f647cb62cd4f 424 SMART SM00729 137 355 1.9E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 SUPERFAMILY SSF102114 125 359 3.27E-49 T 14-10-2018 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 390 3.1E-131 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 Pfam PF04055 Radical SAM superfamily 142 312 2.1E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 390 2.1E-99 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 Gene3D G3DSA:3.40.50.12160 3 120 6.7E-18 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Atu2694 df59cc84561064a5de03f647cb62cd4f 424 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Atu2694 df59cc84561064a5de03f647cb62cd4f 424 Pfam PF00919 Uncharacterized protein family UPF0004 4 90 4.6E-18 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Atu5048 491857080877ef0fbd45cbf6a6b2a70a 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 255 1.8E-76 T 14-10-2018 Atu5048 491857080877ef0fbd45cbf6a6b2a70a 258 SUPERFAMILY SSF56219 2 256 2.36E-80 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu5048 491857080877ef0fbd45cbf6a6b2a70a 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 1.6E-15 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atu5048 491857080877ef0fbd45cbf6a6b2a70a 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Atu5048 491857080877ef0fbd45cbf6a6b2a70a 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 256 9.8E-72 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Atu5048 491857080877ef0fbd45cbf6a6b2a70a 258 Gene3D G3DSA:3.60.10.10 1 257 3.7E-73 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 1.1E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 323 344 1.1E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 1.1E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 1.1E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Gene3D G3DSA:3.30.1360.70 1 110 1.4E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 SMART SM00836 454 584 7.5E-60 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 SUPERFAMILY SSF55190 29 106 2.49E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Pfam PF05746 DALR anticodon binding domain 454 584 1.5E-34 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Gene3D G3DSA:3.40.50.620 123 448 3.2E-147 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 93 1.9E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 SMART SM01016 5 94 2.3E-31 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 17 584 2.6E-109 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 SUPERFAMILY SSF47323 448 584 4.19E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 584 23.935 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Gene3D G3DSA:1.10.730.10 449 584 3.2E-147 T 14-10-2018 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 SUPERFAMILY SSF52374 116 465 7.24E-83 T 14-10-2018 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Pfam PF00750 tRNA synthetases class I (R) 118 180 1.0E-11 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Atu1711 b3aba69d8330b590d58c58a90b2cd39e 585 Pfam PF00750 tRNA synthetases class I (R) 313 417 4.8E-7 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 SMART SM00845 351 496 1.3E-77 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 Pfam PF02934 GatB/GatE catalytic domain 24 312 1.9E-112 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 SUPERFAMILY SSF55931 23 319 2.35E-112 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 Pfam PF02637 GatB domain 352 496 2.6E-49 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 21 496 8.9E-162 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 SUPERFAMILY SSF89095 320 425 9.59E-34 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 Gene3D G3DSA:1.10.10.410 437 498 1.1E-19 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 168 182 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 21 497 36.967 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Atu1324 fd06251c1b38faa1b28e4d2f2d92aecd 501 Gene3D G3DSA:1.10.150.380 320 436 3.1E-36 T 14-10-2018 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 Gene3D G3DSA:3.40.190.10 100 299 3.3E-54 T 14-10-2018 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 SUPERFAMILY SSF46785 12 121 4.92E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 Gene3D G3DSA:1.10.10.10 12 96 7.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 1.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 SUPERFAMILY SSF53850 99 302 1.43E-43 T 14-10-2018 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 Gene3D G3DSA:3.40.190.10 173 274 3.3E-54 T 14-10-2018 Atu5241 dc1bf791dc1d366792aa1ff979e9b646 313 Pfam PF03466 LysR substrate binding domain 99 300 2.8E-42 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 Gene3D G3DSA:3.30.420.40 246 482 4.0E-59 T 14-10-2018 Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 SUPERFAMILY SSF53067 4 246 2.13E-74 T 14-10-2018 Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 Gene3D G3DSA:3.30.420.40 1 244 7.0E-79 T 14-10-2018 Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 PIRSF PIRSF000538 1 483 2.3E-125 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 SUPERFAMILY SSF53067 245 458 2.0E-58 T 14-10-2018 Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 438 5.9E-39 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atu1903 eaeab31c9fe77a33969182d4a812ea5e 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 243 4.8E-62 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu3908 3817f54d92bb19046602ec6871b93cc4 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 7.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3908 3817f54d92bb19046602ec6871b93cc4 221 Pfam PF07729 FCD domain 82 201 1.5E-11 T 14-10-2018 IPR011711 GntR, C-terminal Atu3908 3817f54d92bb19046602ec6871b93cc4 221 Gene3D G3DSA:1.10.10.10 8 73 2.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3908 3817f54d92bb19046602ec6871b93cc4 221 SMART SM00895 82 204 2.6E-8 T 14-10-2018 IPR011711 GntR, C-terminal Atu3908 3817f54d92bb19046602ec6871b93cc4 221 Gene3D G3DSA:1.20.120.530 75 219 4.8E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3908 3817f54d92bb19046602ec6871b93cc4 221 SUPERFAMILY SSF46785 1 93 2.91E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3908 3817f54d92bb19046602ec6871b93cc4 221 SUPERFAMILY SSF48008 78 213 1.1E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3908 3817f54d92bb19046602ec6871b93cc4 221 SMART SM00345 14 72 4.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 Gene3D G3DSA:3.30.1330.60 52 172 6.4E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 PRINTS PR01021 OMPA domain signature 117 133 6.8E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 PRINTS PR01021 OMPA domain signature 72 94 6.8E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 PRINTS PR01021 OMPA domain signature 102 117 6.8E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 69 171 2.7E-43 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 Pfam PF00691 OmpA family 71 166 3.0E-21 T 14-10-2018 IPR006665 OmpA-like domain Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 SUPERFAMILY SSF103088 60 172 1.05E-35 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 14 172 30.888 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Atu3713 ad2bfa7d3e1cfb0d01fa7cae74400edb 177 ProSitePatterns PS01068 OmpA-like domain. 104 148 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Atu1420 732317a3009941361abbd6c531653416 471 SUPERFAMILY SSF103025 12 333 1.11E-52 T 14-10-2018 Atu1420 732317a3009941361abbd6c531653416 471 Pfam PF01571 Aminomethyltransferase folate-binding domain 35 257 6.3E-39 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu1420 732317a3009941361abbd6c531653416 471 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 321 449 1.0E-4 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu1420 732317a3009941361abbd6c531653416 471 PIRSF PIRSF006487 22 364 1.4E-23 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atu3342 dc129118e163ae992690234da18209be 261 Pfam PF06283 Trehalose utilisation 6 220 7.1E-34 T 14-10-2018 IPR029010 ThuA-like domain Atu3342 dc129118e163ae992690234da18209be 261 PIRSF PIRSF030013 1 248 1.3E-132 T 14-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote Atu3342 dc129118e163ae992690234da18209be 261 SUPERFAMILY SSF52317 2 238 6.87E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3342 dc129118e163ae992690234da18209be 261 Gene3D G3DSA:3.40.50.880 1 247 2.5E-107 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3457 87821f56201fe3a7ce71ffcb64f12f17 278 SUPERFAMILY SSF52540 5 247 1.47E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3457 87821f56201fe3a7ce71ffcb64f12f17 278 SMART SM00382 31 237 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3457 87821f56201fe3a7ce71ffcb64f12f17 278 Pfam PF00005 ABC transporter 26 180 1.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3457 87821f56201fe3a7ce71ffcb64f12f17 278 Gene3D G3DSA:3.40.50.300 3 277 7.1E-73 T 14-10-2018 Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 326 3.1E-155 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 Gene3D G3DSA:3.90.180.10 21 322 5.0E-120 T 14-10-2018 Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 SUPERFAMILY SSF51735 112 288 1.91E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 SMART SM00829 10 324 1.4E-57 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 SUPERFAMILY SSF50129 1 138 1.83E-38 T 14-10-2018 IPR011032 GroES-like superfamily Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 Gene3D G3DSA:3.40.50.720 120 263 5.0E-120 T 14-10-2018 Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 Pfam PF00107 Zinc-binding dehydrogenase 151 267 9.3E-32 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu0825 4f96b50836404f50e656a5ab1c0a43b0 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 1.2E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu0197 bc5299dad3e4be86a26e6873ee348019 312 Gene3D G3DSA:3.40.50.300 1 257 3.9E-77 T 14-10-2018 Atu0197 bc5299dad3e4be86a26e6873ee348019 312 Pfam PF00005 ABC transporter 18 163 2.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0197 bc5299dad3e4be86a26e6873ee348019 312 SUPERFAMILY SSF54631 244 305 3.41E-5 T 14-10-2018 Atu0197 bc5299dad3e4be86a26e6873ee348019 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0197 bc5299dad3e4be86a26e6873ee348019 312 SMART SM00382 26 213 3.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0197 bc5299dad3e4be86a26e6873ee348019 312 SUPERFAMILY SSF52540 1 240 7.14E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5525 aa86ac6aab6ad57d6960d1b46419955c 305 SUPERFAMILY SSF52540 46 294 1.71E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5525 aa86ac6aab6ad57d6960d1b46419955c 305 SMART SM00382 71 272 3.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5525 aa86ac6aab6ad57d6960d1b46419955c 305 Gene3D G3DSA:3.40.50.300 28 294 4.2E-59 T 14-10-2018 Atu5525 aa86ac6aab6ad57d6960d1b46419955c 305 Pfam PF00005 ABC transporter 62 223 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5525 aa86ac6aab6ad57d6960d1b46419955c 305 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 272 294 6.0E-11 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu3400 20cba91b7f58f74b765af844aff0f5a3 118 SUPERFAMILY SSF51182 6 117 2.71E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3400 20cba91b7f58f74b765af844aff0f5a3 118 Pfam PF05899 Protein of unknown function (DUF861) 40 113 4.1E-24 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Atu3400 20cba91b7f58f74b765af844aff0f5a3 118 Gene3D G3DSA:2.60.120.10 2 115 1.1E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4507 15816f2e24788d537c5f6dd84a54cf51 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 313 1.3E-20 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu4507 15816f2e24788d537c5f6dd84a54cf51 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 282 4.1E-49 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu4507 15816f2e24788d537c5f6dd84a54cf51 320 Gene3D G3DSA:3.40.50.720 9 303 2.5E-103 T 14-10-2018 Atu4507 15816f2e24788d537c5f6dd84a54cf51 320 SUPERFAMILY SSF51735 101 283 5.41E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4507 15816f2e24788d537c5f6dd84a54cf51 320 SUPERFAMILY SSF52283 6 136 1.89E-28 T 14-10-2018 Atu4507 15816f2e24788d537c5f6dd84a54cf51 320 Gene3D G3DSA:3.40.50.720 100 285 2.5E-103 T 14-10-2018 Atu0702 a872c5399ceb140c034eead3f830d103 295 Gene3D G3DSA:2.120.10.30 1 295 1.6E-109 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu0702 a872c5399ceb140c034eead3f830d103 295 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 19 261 5.4E-66 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Atu0702 a872c5399ceb140c034eead3f830d103 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 242 260 1.2E-29 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0702 a872c5399ceb140c034eead3f830d103 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 159 179 1.2E-29 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0702 a872c5399ceb140c034eead3f830d103 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 1.2E-29 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0702 a872c5399ceb140c034eead3f830d103 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 96 117 1.2E-29 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0702 a872c5399ceb140c034eead3f830d103 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 136 158 1.2E-29 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0702 a872c5399ceb140c034eead3f830d103 295 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 200 217 1.2E-29 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0702 a872c5399ceb140c034eead3f830d103 295 SUPERFAMILY SSF63829 11 291 9.32E-58 T 14-10-2018 Atu5330 480a5335ddb37c3538f449f488b96efa 318 SUPERFAMILY SSF53850 51 282 5.12E-8 T 14-10-2018 Atu5330 480a5335ddb37c3538f449f488b96efa 318 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 298 4.3E-43 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu5330 480a5335ddb37c3538f449f488b96efa 318 Gene3D G3DSA:3.40.190.150 28 300 2.0E-73 T 14-10-2018 Atu5330 480a5335ddb37c3538f449f488b96efa 318 Gene3D G3DSA:3.40.190.10 123 244 2.0E-73 T 14-10-2018 Atu5330 480a5335ddb37c3538f449f488b96efa 318 PIRSF PIRSF017082 2 317 1.8E-80 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu5084 a274caa905e7838071654c95938e1b32 317 Gene3D G3DSA:3.40.190.10 98 299 6.3E-44 T 14-10-2018 Atu5084 a274caa905e7838071654c95938e1b32 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5084 a274caa905e7838071654c95938e1b32 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5084 a274caa905e7838071654c95938e1b32 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5084 a274caa905e7838071654c95938e1b32 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 2.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5084 a274caa905e7838071654c95938e1b32 317 Pfam PF03466 LysR substrate binding domain 100 304 1.1E-20 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5084 a274caa905e7838071654c95938e1b32 317 Gene3D G3DSA:3.40.190.10 177 275 6.3E-44 T 14-10-2018 Atu5084 a274caa905e7838071654c95938e1b32 317 SUPERFAMILY SSF53850 96 302 1.41E-32 T 14-10-2018 Atu5084 a274caa905e7838071654c95938e1b32 317 SUPERFAMILY SSF46785 9 89 1.9E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5084 a274caa905e7838071654c95938e1b32 317 Gene3D G3DSA:1.10.10.10 5 93 3.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4125 bbae7d3db60f0b48fd354deb862c912a 233 SMART SM00382 29 212 6.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4125 bbae7d3db60f0b48fd354deb862c912a 233 Gene3D G3DSA:3.40.50.300 2 229 5.5E-54 T 14-10-2018 Atu4125 bbae7d3db60f0b48fd354deb862c912a 233 Pfam PF00005 ABC transporter 20 161 2.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4125 bbae7d3db60f0b48fd354deb862c912a 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4125 bbae7d3db60f0b48fd354deb862c912a 233 SUPERFAMILY SSF52540 4 225 4.13E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5191 1ec17fffbad33c6ddf7fd49b3665590a 374 Gene3D G3DSA:3.30.360.10 139 352 3.1E-89 T 14-10-2018 Atu5191 1ec17fffbad33c6ddf7fd49b3665590a 374 SUPERFAMILY SSF55347 133 296 3.27E-16 T 14-10-2018 Atu5191 1ec17fffbad33c6ddf7fd49b3665590a 374 SUPERFAMILY SSF51735 5 177 4.05E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5191 1ec17fffbad33c6ddf7fd49b3665590a 374 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 124 4.0E-12 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu5191 1ec17fffbad33c6ddf7fd49b3665590a 374 Gene3D G3DSA:3.40.50.720 9 345 3.1E-89 T 14-10-2018 Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 SUPERFAMILY SSF46785 28 94 9.5E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 Gene3D G3DSA:3.30.420.40 95 209 1.6E-7 T 14-10-2018 Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 Pfam PF13412 Winged helix-turn-helix DNA-binding 30 74 1.1E-9 T 14-10-2018 Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 Gene3D G3DSA:1.10.10.10 18 94 3.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 Gene3D G3DSA:3.30.420.40 210 395 6.0E-25 T 14-10-2018 Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 SUPERFAMILY SSF53067 101 393 7.07E-35 T 14-10-2018 Atu0062 2878bd6f7d61052c52ecddb8f7649429 410 Pfam PF00480 ROK family 101 266 6.0E-19 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 SUPERFAMILY SSF52540 817 1130 1.58E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 SUPERFAMILY SSF52540 1043 1456 5.06E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 250 262 1.1E-5 T 14-10-2018 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 180 1.1E-5 T 14-10-2018 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 276 300 1.1E-5 T 14-10-2018 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 190 204 1.1E-5 T 14-10-2018 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 SUPERFAMILY SSF53335 154 536 6.85E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 253 259 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 SMART SM00487 864 1131 7.7E-5 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 Gene3D G3DSA:3.40.50.150 167 361 3.1E-29 T 14-10-2018 Atu6101 d021dd3d4e72ed233057a6188d92d573 1693 Gene3D G3DSA:3.40.50.300 1317 1444 1.9E-15 T 14-10-2018 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 Gene3D G3DSA:3.30.565.10 204 371 1.5E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 SMART SM00387 244 365 1.1E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 362 2.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 325 2.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 311 2.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 344 2.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 362 2.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 199 7.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 SUPERFAMILY SSF47384 134 198 2.35E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 Pfam PF00989 PAS fold 17 119 4.3E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 SMART SM00388 139 203 8.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 Gene3D G3DSA:1.10.287.130 125 201 3.8E-11 T 14-10-2018 Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 SUPERFAMILY SSF55874 207 362 7.73E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 SUPERFAMILY SSF55785 13 118 1.0E-7 T 14-10-2018 IPR035965 PAS domain superfamily Atu1445 b3578ec2fc989250db92432aafc8fb0f 382 Gene3D G3DSA:3.30.450.20 9 121 2.2E-9 T 14-10-2018 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 SMART SM01120 388 561 8.7E-58 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 Gene3D G3DSA:1.25.40.340 345 564 1.5E-56 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 SUPERFAMILY SSF82549 11 332 1.31E-112 T 14-10-2018 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 Pfam PF02733 Dak1 domain 17 327 4.9E-116 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 Gene3D G3DSA:3.40.50.10440 11 184 1.1E-67 T 14-10-2018 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 SUPERFAMILY SSF101473 353 560 4.19E-48 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 Pfam PF02734 DAK2 domain 389 560 4.6E-47 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Atu3543 60dad1a14a84a50bd155b3b6ff2f8d6f 564 Gene3D G3DSA:3.30.1180.20 186 331 8.9E-49 T 14-10-2018 Atu4006 3a5312e0feee640e7266d52ca01349ca 145 SUPERFAMILY SSF46785 1 57 1.85E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4006 3a5312e0feee640e7266d52ca01349ca 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.9E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4006 3a5312e0feee640e7266d52ca01349ca 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.9E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4006 3a5312e0feee640e7266d52ca01349ca 145 SMART SM00344 1 107 2.8E-14 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu4006 3a5312e0feee640e7266d52ca01349ca 145 SUPERFAMILY SSF54909 64 142 2.95E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4006 3a5312e0feee640e7266d52ca01349ca 145 Gene3D G3DSA:3.30.70.920 54 144 1.5E-14 T 14-10-2018 Atu4006 3a5312e0feee640e7266d52ca01349ca 145 Pfam PF01037 Lrp/AsnC ligand binding domain 68 137 1.7E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu4006 3a5312e0feee640e7266d52ca01349ca 145 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 3.8E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4006 3a5312e0feee640e7266d52ca01349ca 145 Gene3D G3DSA:1.10.10.10 1 53 2.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3529 0d3247ff062feb8254c168e86d488867 397 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 397 177.348 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3529 0d3247ff062feb8254c168e86d488867 397 PIRSF PIRSF016049 1 393 5.1E-166 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3529 0d3247ff062feb8254c168e86d488867 397 SUPERFAMILY SSF51658 1 384 9.95E-72 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3529 0d3247ff062feb8254c168e86d488867 397 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 387 3.6E-123 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3529 0d3247ff062feb8254c168e86d488867 397 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 390 8.7E-140 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu1255 49e805313a77a504e1f58ba17bf7431a 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 8.1E-4 T 14-10-2018 Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 8.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 8.3E-60 T 14-10-2018 Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1255 49e805313a77a504e1f58ba17bf7431a 252 SUPERFAMILY SSF51735 7 249 2.91E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1255 49e805313a77a504e1f58ba17bf7431a 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1255 49e805313a77a504e1f58ba17bf7431a 252 Gene3D G3DSA:3.40.50.720 4 252 5.2E-77 T 14-10-2018 Atu0172 c1494b731ee2526e479d526e220a937c 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 315 6.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0172 c1494b731ee2526e479d526e220a937c 328 SUPERFAMILY SSF161098 120 306 1.44E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu0172 c1494b731ee2526e479d526e220a937c 328 Gene3D G3DSA:1.10.3720.10 112 316 4.6E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu0172 c1494b731ee2526e479d526e220a937c 328 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 36 316 3.9E-69 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 PIRSF PIRSF006004 3 381 4.1E-147 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 Pfam PF04055 Radical SAM superfamily 117 295 2.3E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 369 71.25 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 Gene3D G3DSA:1.10.150.530 4 69 3.6E-15 T 14-10-2018 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 373 7.7E-119 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 SUPERFAMILY SSF102114 110 339 8.11E-12 T 14-10-2018 Atu2673 26e08611c3c13a00136a1f8dd66e7f44 390 Gene3D G3DSA:3.20.20.70 70 354 8.9E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0423 85d1a6be7953a8714a19efb858902d4f 271 Gene3D G3DSA:3.40.50.300 25 267 1.3E-64 T 14-10-2018 Atu0423 85d1a6be7953a8714a19efb858902d4f 271 SUPERFAMILY SSF52540 27 258 4.09E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0423 85d1a6be7953a8714a19efb858902d4f 271 Pfam PF00005 ABC transporter 40 195 1.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0423 85d1a6be7953a8714a19efb858902d4f 271 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 271 2.1E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Atu0423 85d1a6be7953a8714a19efb858902d4f 271 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0423 85d1a6be7953a8714a19efb858902d4f 271 SMART SM00382 48 247 5.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3959 766e42165530f90bee1ff90b71f315a3 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu3959 766e42165530f90bee1ff90b71f315a3 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu3959 766e42165530f90bee1ff90b71f315a3 505 Pfam PF00171 Aldehyde dehydrogenase family 34 491 6.7E-170 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu3959 766e42165530f90bee1ff90b71f315a3 505 SUPERFAMILY SSF53720 17 495 4.32E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu3959 766e42165530f90bee1ff90b71f315a3 505 Gene3D G3DSA:3.40.309.10 271 459 1.9E-172 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu3959 766e42165530f90bee1ff90b71f315a3 505 Gene3D G3DSA:3.40.605.10 34 490 1.9E-172 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu5402 a97cdb992d757c1638fa564d2bccdef4 297 SUPERFAMILY SSF161098 60 285 9.42E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu5402 a97cdb992d757c1638fa564d2bccdef4 297 Gene3D G3DSA:1.10.3720.10 56 296 2.8E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu5402 a97cdb992d757c1638fa564d2bccdef4 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 290 1.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4591 6c05e564d300753a6a216159ba8bdc49 301 Gene3D G3DSA:1.10.10.10 8 94 5.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4591 6c05e564d300753a6a216159ba8bdc49 301 Pfam PF03466 LysR substrate binding domain 92 296 5.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4591 6c05e564d300753a6a216159ba8bdc49 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 6.3E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4591 6c05e564d300753a6a216159ba8bdc49 301 SUPERFAMILY SSF53850 94 297 4.19E-42 T 14-10-2018 Atu4591 6c05e564d300753a6a216159ba8bdc49 301 Gene3D G3DSA:3.40.190.10 167 268 5.3E-63 T 14-10-2018 Atu4591 6c05e564d300753a6a216159ba8bdc49 301 SUPERFAMILY SSF46785 10 116 4.41E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4591 6c05e564d300753a6a216159ba8bdc49 301 Gene3D G3DSA:3.40.190.10 96 294 5.3E-63 T 14-10-2018 Atu4048 5d29611238134ac8ce8805b23e15afae 314 Gene3D G3DSA:3.40.50.720 98 280 1.3E-111 T 14-10-2018 Atu4048 5d29611238134ac8ce8805b23e15afae 314 Gene3D G3DSA:3.40.50.720 19 314 1.3E-111 T 14-10-2018 Atu4048 5d29611238134ac8ce8805b23e15afae 314 SUPERFAMILY SSF51735 98 280 1.67E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4048 5d29611238134ac8ce8805b23e15afae 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 279 1.8E-47 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 SUPERFAMILY SSF50129 1 177 4.11E-50 T 14-10-2018 IPR011032 GroES-like superfamily Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 Pfam PF00107 Zinc-binding dehydrogenase 178 302 3.0E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 SUPERFAMILY SSF51735 142 308 6.8E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 Gene3D G3DSA:3.40.50.720 155 289 9.0E-99 T 14-10-2018 Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 138 2.1E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 SMART SM00829 8 340 0.0092 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu4087 7dc9a4cd6236b666bce3ea18e35e69b3 343 Gene3D G3DSA:3.90.180.10 8 328 9.0E-99 T 14-10-2018 Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 SUPERFAMILY SSF51338 5 382 4.78E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 Gene3D G3DSA:3.20.20.140 56 346 1.4E-115 T 14-10-2018 Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 Gene3D G3DSA:2.30.40.10 11 377 1.4E-115 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 SUPERFAMILY SSF51556 55 350 1.62E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 PIRSF PIRSF038994 6 384 7.4E-107 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 377 5.7E-91 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Atu2608 213b222cf5310577d3ec5b1d197fa6fd 388 Pfam PF01979 Amidohydrolase family 52 378 6.5E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 Gene3D G3DSA:3.50.30.80 422 572 6.1E-53 T 14-10-2018 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 Pfam PF00920 Dehydratase family 68 601 3.1E-160 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 3 605 58.453 T 14-10-2018 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 SUPERFAMILY SSF143975 5 421 1.14E-139 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 SUPERFAMILY SSF52016 422 604 5.18E-61 T 14-10-2018 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu0598 18a82a7640acfa0ffbc4e17f3f7895b8 606 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 604 0.0 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 Atu4733 0c8360335de8d3aa99fe57ef292de91c 165 SMART SM00972 104 162 2.4E-22 T 14-10-2018 IPR007893 Spore coat protein U Atu4733 0c8360335de8d3aa99fe57ef292de91c 165 Pfam PF05229 Spore Coat Protein U domain 28 162 8.6E-38 T 14-10-2018 IPR007893 Spore coat protein U Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 Pfam PF00005 ABC transporter 307 458 4.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 Gene3D G3DSA:3.40.50.300 282 545 5.2E-81 T 14-10-2018 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 Gene3D G3DSA:3.40.50.300 7 281 1.3E-87 T 14-10-2018 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 SMART SM00382 315 507 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 SMART SM00382 38 238 1.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 272 1.6E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 509 541 5.9E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 SUPERFAMILY SSF52540 301 529 2.04E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 Pfam PF00005 ABC transporter 30 188 3.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0190 104c4f5d7142cc0f8c8b05858927a854 546 SUPERFAMILY SSF52540 9 260 8.22E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3828 ae3b3db959de5af56652d45e8876999e 192 Gene3D G3DSA:3.40.630.30 15 191 5.6E-22 T 14-10-2018 Atu3828 ae3b3db959de5af56652d45e8876999e 192 SUPERFAMILY SSF55729 25 170 2.84E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3828 ae3b3db959de5af56652d45e8876999e 192 Pfam PF00583 Acetyltransferase (GNAT) family 44 163 1.5E-9 T 14-10-2018 IPR000182 GNAT domain Atu2588 8dfa3304251bb39198ce8e70af720a0e 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 325 6.1E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2588 8dfa3304251bb39198ce8e70af720a0e 332 SUPERFAMILY SSF161098 97 308 1.96E-12 T 14-10-2018 IPR035906 MetI-like superfamily Atu2588 8dfa3304251bb39198ce8e70af720a0e 332 Gene3D G3DSA:1.10.3720.10 84 326 1.4E-15 T 14-10-2018 IPR035906 MetI-like superfamily Atu1314 30b7287ad83b25828620baca23e4b1f9 214 SUPERFAMILY SSF46689 18 85 4.94E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1314 30b7287ad83b25828620baca23e4b1f9 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 4.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1314 30b7287ad83b25828620baca23e4b1f9 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 4.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1314 30b7287ad83b25828620baca23e4b1f9 214 Gene3D G3DSA:1.10.357.10 16 213 6.6E-23 T 14-10-2018 Atu1314 30b7287ad83b25828620baca23e4b1f9 214 SUPERFAMILY SSF48498 101 213 7.79E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu1314 30b7287ad83b25828620baca23e4b1f9 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 361 7.4E-134 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 365 48.084 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 360 1.9E-132 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 SUPERFAMILY SSF53659 6 366 8.82E-111 T 14-10-2018 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 Gene3D G3DSA:3.40.718.10 4 368 6.8E-132 T 14-10-2018 Atu2791 3430c7438a1dc6eae8b6de6ce9783f51 370 SMART SM01329 5 361 8.3E-177 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 6.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 6.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 Pfam PF07729 FCD domain 102 229 8.5E-25 T 14-10-2018 IPR011711 GntR, C-terminal Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 Gene3D G3DSA:1.20.120.530 99 252 1.8E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 SMART SM00895 102 230 1.2E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 SUPERFAMILY SSF48008 101 235 4.71E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 Gene3D G3DSA:1.10.10.10 4 77 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 SMART SM00345 18 77 2.2E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 SUPERFAMILY SSF46785 12 81 7.72E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0662 86eab6a87fd86fe6c47291a44509ba7c 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 3.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0656 0b0ae8f54737a214ed39486f255f0fae 457 Gene3D G3DSA:3.30.590.20 2 457 8.1E-175 T 14-10-2018 Atu0656 0b0ae8f54737a214ed39486f255f0fae 457 SUPERFAMILY SSF55931 25 447 6.96E-61 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu0656 0b0ae8f54737a214ed39486f255f0fae 457 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 50 354 2.9E-81 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Atu0656 0b0ae8f54737a214ed39486f255f0fae 457 PIRSF PIRSF017901 1 457 1.5E-174 T 14-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Atu0656 0b0ae8f54737a214ed39486f255f0fae 457 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 10 457 1.1E-183 T 14-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Atu1343 e6f7cd4c883268f5c8a42a46e9dea07f 156 SUPERFAMILY SSF52499 1 149 3.27E-16 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu1343 e6f7cd4c883268f5c8a42a46e9dea07f 156 Pfam PF00857 Isochorismatase family 58 147 1.5E-5 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu1343 e6f7cd4c883268f5c8a42a46e9dea07f 156 Gene3D G3DSA:3.40.50.850 1 155 2.8E-10 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 PIRSF PIRSF000446 18 330 3.4E-94 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 Gene3D G3DSA:3.30.70.250 146 218 8.4E-100 T 14-10-2018 Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 Gene3D G3DSA:3.40.366.10 22 305 8.4E-100 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 SUPERFAMILY SSF55048 147 216 1.18E-17 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 Pfam PF00698 Acyl transferase domain 22 283 1.8E-36 T 14-10-2018 IPR014043 Acyl transferase Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 23 331 3.9E-41 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 SUPERFAMILY SSF52151 20 328 2.56E-75 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Atu1094 5fe48ef20425ffaebaa419ca4c91f3b7 331 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 19 309 2.4E-95 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Atu0176 5e711491542be0761026dd8eaebb5070 235 SMART SM00382 36 229 2.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0176 5e711491542be0761026dd8eaebb5070 235 Gene3D G3DSA:3.40.50.300 7 229 8.3E-50 T 14-10-2018 Atu0176 5e711491542be0761026dd8eaebb5070 235 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0176 5e711491542be0761026dd8eaebb5070 235 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 7 226 2.8E-98 T 14-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0176 5e711491542be0761026dd8eaebb5070 235 SUPERFAMILY SSF52540 24 225 1.45E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0176 5e711491542be0761026dd8eaebb5070 235 Pfam PF00005 ABC transporter 28 181 4.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Gene3D G3DSA:1.10.8.10 151 203 9.1E-11 T 14-10-2018 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 SUPERFAMILY SSF50249 1 63 2.11E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Pfam PF14520 Helix-hairpin-helix domain 72 129 8.0E-14 T 14-10-2018 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Pfam PF01330 RuvA N terminal domain 1 62 1.2E-17 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 28.836 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 183 2.3E-35 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Gene3D G3DSA:2.40.50.140 1 65 1.3E-18 T 14-10-2018 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 SUPERFAMILY SSF46929 158 204 3.4E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Gene3D G3DSA:1.10.150.20 68 141 1.2E-21 T 14-10-2018 Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 SUPERFAMILY SSF47781 65 134 2.73E-20 T 14-10-2018 IPR010994 RuvA domain 2-like Atu3723 f6aaec85e2b6fbc9f470a808c6994769 205 Pfam PF07499 RuvA, C-terminal domain 158 204 9.5E-12 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Atu5509 129a2d497a49f73348fe5e0473640038 681 Pfam PF00512 His Kinase A (phospho-acceptor) domain 323 385 2.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu5509 129a2d497a49f73348fe5e0473640038 681 SMART SM00388 321 387 7.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu5509 129a2d497a49f73348fe5e0473640038 681 SUPERFAMILY SSF55785 159 268 7.68E-18 T 14-10-2018 IPR035965 PAS domain superfamily Atu5509 129a2d497a49f73348fe5e0473640038 681 Gene3D G3DSA:3.40.50.2300 558 681 8.2E-27 T 14-10-2018 Atu5509 129a2d497a49f73348fe5e0473640038 681 SUPERFAMILY SSF55874 378 549 1.05E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5509 129a2d497a49f73348fe5e0473640038 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 490 4.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5509 129a2d497a49f73348fe5e0473640038 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 504 4.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5509 129a2d497a49f73348fe5e0473640038 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 525 4.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5509 129a2d497a49f73348fe5e0473640038 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 4.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5509 129a2d497a49f73348fe5e0473640038 681 SUPERFAMILY SSF47384 312 384 2.55E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu5509 129a2d497a49f73348fe5e0473640038 681 Gene3D G3DSA:1.10.287.130 313 386 4.5E-21 T 14-10-2018 Atu5509 129a2d497a49f73348fe5e0473640038 681 Pfam PF08447 PAS fold 176 260 3.7E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu5509 129a2d497a49f73348fe5e0473640038 681 SMART SM00387 428 547 1.8E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu5509 129a2d497a49f73348fe5e0473640038 681 SUPERFAMILY SSF52172 25 144 2.56E-5 T 14-10-2018 IPR011006 CheY-like superfamily Atu5509 129a2d497a49f73348fe5e0473640038 681 SMART SM00091 152 219 1.6E-4 T 14-10-2018 IPR000014 PAS domain Atu5509 129a2d497a49f73348fe5e0473640038 681 Gene3D G3DSA:3.30.565.10 389 557 5.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5509 129a2d497a49f73348fe5e0473640038 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 545 7.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu5509 129a2d497a49f73348fe5e0473640038 681 Pfam PF00072 Response regulator receiver domain 571 673 2.9E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5509 129a2d497a49f73348fe5e0473640038 681 Gene3D G3DSA:3.30.450.20 148 219 4.7E-16 T 14-10-2018 Atu5509 129a2d497a49f73348fe5e0473640038 681 SMART SM00086 225 267 7.8E-5 T 14-10-2018 IPR001610 PAC motif Atu5509 129a2d497a49f73348fe5e0473640038 681 SMART SM00448 569 677 4.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5509 129a2d497a49f73348fe5e0473640038 681 Gene3D G3DSA:2.10.70.100 222 269 1.0E-13 T 14-10-2018 Atu5509 129a2d497a49f73348fe5e0473640038 681 SUPERFAMILY SSF52172 568 680 6.26E-29 T 14-10-2018 IPR011006 CheY-like superfamily Atu5509 129a2d497a49f73348fe5e0473640038 681 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 273 5.6E-8 T 14-10-2018 IPR000014 PAS domain Atu0631 6a74822af4280edcf47ee24d4e88416a 189 SMART SM00852 23 167 5.3E-37 T 14-10-2018 IPR001453 MoaB/Mog domain Atu0631 6a74822af4280edcf47ee24d4e88416a 189 Pfam PF00994 Probable molybdopterin binding domain 23 164 7.2E-42 T 14-10-2018 IPR001453 MoaB/Mog domain Atu0631 6a74822af4280edcf47ee24d4e88416a 189 PIRSF PIRSF006443 7 175 6.4E-62 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Atu0631 6a74822af4280edcf47ee24d4e88416a 189 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 81 94 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Atu0631 6a74822af4280edcf47ee24d4e88416a 189 Gene3D G3DSA:3.40.980.10 12 180 1.2E-52 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atu0631 6a74822af4280edcf47ee24d4e88416a 189 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 16 178 1.8E-80 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 Atu0631 6a74822af4280edcf47ee24d4e88416a 189 SUPERFAMILY SSF53218 16 178 1.57E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atu0631 6a74822af4280edcf47ee24d4e88416a 189 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 22 160 2.3E-38 T 14-10-2018 IPR001453 MoaB/Mog domain Atu4605 c778d9e329b28be96794bd3293953ec1 88 Pfam PF01527 Transposase 2 71 9.8E-24 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu4605 c778d9e329b28be96794bd3293953ec1 88 SUPERFAMILY SSF46689 1 69 7.53E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5412 9b8c3b305fc581fbcb6251b64eda7780 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 259 1.5E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5412 9b8c3b305fc581fbcb6251b64eda7780 275 SUPERFAMILY SSF161098 6 264 3.66E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu5412 9b8c3b305fc581fbcb6251b64eda7780 275 Gene3D G3DSA:1.10.3720.10 6 272 2.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:1.10.150.390 1311 1371 4.5E-27 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1372 18.599 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 SMART SM00663 237 516 1.8E-179 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Pfam PF04998 RNA polymerase Rpb1, domain 5 763 1310 1.4E-71 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:1.10.274.100 492 568 8.6E-22 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:1.10.1790.20 1129 1309 1.2E-65 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:2.40.50.100 1145 1210 1.2E-65 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 344 5.9E-89 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 487 3.2E-34 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 644 8.6E-26 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:2.40.50.100 1019 1120 9.0E-24 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:1.10.132.30 638 787 1.6E-60 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 SUPERFAMILY SSF64484 17 1358 0.0 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:2.40.50.100 944 1018 5.6E-22 T 14-10-2018 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1017 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 759 1.1E-17 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1955 fccca9b6ef6a167e31677dfab44cf936 1402 Gene3D G3DSA:1.10.40.90 376 418 6.5E-21 T 14-10-2018 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 SUPERFAMILY SSF56176 183 364 1.28E-56 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Gene3D G3DSA:3.10.20.30 1 87 1.1E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 SUPERFAMILY SSF55447 370 477 4.32E-35 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 PIRSF PIRSF036557 2 487 4.4E-231 T 14-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 5 474 4.8E-212 T 14-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Gene3D G3DSA:1.10.150.120 88 195 3.5E-32 T 14-10-2018 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Gene3D G3DSA:3.30.390.50 372 475 6.5E-30 T 14-10-2018 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Gene3D G3DSA:3.30.465.10 252 364 4.9E-34 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 373 473 4.4E-35 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Pfam PF01799 [2Fe-2S] binding domain 84 157 1.5E-29 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 SUPERFAMILY SSF47741 96 207 2.22E-33 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Gene3D G3DSA:3.30.43.10 202 251 3.7E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 SUPERFAMILY SSF54292 5 88 1.23E-16 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 SMART SM01092 372 474 5.3E-37 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Atu2309 4ff37dd50141eef1ee96e975a260b7d2 489 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 202 364 5.2E-49 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Atu1062 516b591c0afb2f0ed21bcaad6582f068 288 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 40 205 1.5E-32 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Atu1062 516b591c0afb2f0ed21bcaad6582f068 288 Gene3D G3DSA:1.20.120.1760 25 155 3.0E-14 T 14-10-2018 Atu1062 516b591c0afb2f0ed21bcaad6582f068 288 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 220 255 1.1E-7 T 14-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal Atu1062 516b591c0afb2f0ed21bcaad6582f068 288 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 76 98 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atu1062 516b591c0afb2f0ed21bcaad6582f068 288 Pfam PF01066 CDP-alcohol phosphatidyltransferase 35 98 6.2E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 183 3.8E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Gene3D G3DSA:3.30.70.3380 379 489 1.6E-41 T 14-10-2018 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Gene3D G3DSA:3.30.70.2570 490 564 4.6E-35 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 306.533 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 1.1E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Gene3D G3DSA:3.30.70.870 297 378 6.0E-36 T 14-10-2018 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 TIGRFAM TIGR01393 lepA: elongation factor 4 12 606 7.0E-294 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Gene3D G3DSA:2.40.30.10 198 296 3.5E-33 T 14-10-2018 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Pfam PF06421 GTP-binding protein LepA C-terminus 498 604 2.2E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Pfam PF03144 Elongation factor Tu domain 2 216 286 9.7E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 PRINTS PR00315 GTP-binding elongation factor signature 15 28 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 PRINTS PR00315 GTP-binding elongation factor signature 99 110 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 PRINTS PR00315 GTP-binding elongation factor signature 135 144 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 PRINTS PR00315 GTP-binding elongation factor signature 83 93 5.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Pfam PF00679 Elongation factor G C-terminus 410 495 3.7E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 SUPERFAMILY SSF54980 302 381 3.06E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 SUPERFAMILY SSF52540 7 242 7.38E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 SUPERFAMILY SSF54980 410 504 1.01E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu0241 ee1df3e79fc4e84f24c1483231ab041d 608 Gene3D G3DSA:3.40.50.300 10 194 3.8E-72 T 14-10-2018 Atu8134 393a79600b627be36c179236077d8503 139 Pfam PF01124 MAPEG family 9 133 4.0E-18 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Atu8134 393a79600b627be36c179236077d8503 139 Gene3D G3DSA:1.20.120.550 4 138 5.8E-17 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Atu8134 393a79600b627be36c179236077d8503 139 SUPERFAMILY SSF161084 7 130 5.3E-19 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 394 3.9E-93 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 SUPERFAMILY SSF52540 189 501 1.94E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 500 1.3E-29 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 500 3.7E-153 T 14-10-2018 IPR004482 Mg chelatase-related protein Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 1.1E-39 T 14-10-2018 Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 Gene3D G3DSA:3.40.50.300 190 502 3.8E-55 T 14-10-2018 Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 SUPERFAMILY SSF54211 7 169 5.69E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 Gene3D G3DSA:3.30.230.10 2 160 1.5E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu0311 adc5ec120b885e8d0dd3bd3a7adc5552 510 SMART SM00382 209 391 8.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 SUPERFAMILY SSF51735 138 313 9.66E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 Pfam PF00107 Zinc-binding dehydrogenase 176 305 2.9E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 SMART SM00829 10 343 2.3E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 SUPERFAMILY SSF50129 1 167 1.46E-49 T 14-10-2018 IPR011032 GroES-like superfamily Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 Gene3D G3DSA:3.90.180.10 1 344 3.4E-92 T 14-10-2018 Atu2151 4b14a758fb0483348bdab6e35ecdcb46 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 2.0E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82693 558 657 4.45E-18 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:1.20.1640.10 21 508 4.5E-286 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:3.30.2090.10 706 794 4.5E-286 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82693 51 145 4.71E-24 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:3.30.70.1320 145 332 4.5E-286 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:3.30.70.1440 657 851 4.5E-286 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82866 796 1015 6.02E-43 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82866 299 496 7.85E-47 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.2E-64 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Pfam PF00873 AcrB/AcrD/AcrF family 15 1011 4.4E-264 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82693 147 328 1.78E-20 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82714 194 272 8.5E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:3.30.70.1430 51 802 4.5E-286 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:1.20.1640.10 509 1008 4.5E-286 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 SUPERFAMILY SSF82714 708 791 3.27E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:3.30.70.1430 560 656 4.5E-286 T 14-10-2018 Atu2054 0fc84bdcc4fea6669f7a535f6681e17d 1048 Gene3D G3DSA:3.30.2090.10 189 275 4.5E-286 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 96 5.9E-12 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 SMART SM00642 154 549 5.5E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 Gene3D G3DSA:3.20.20.80 130 562 2.3E-141 T 14-10-2018 Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 Gene3D G3DSA:2.60.40.1180 563 630 6.5E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 SUPERFAMILY SSF51011 563 634 1.58E-10 T 14-10-2018 Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 Gene3D G3DSA:2.60.40.10 5 126 1.8E-31 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 Pfam PF00128 Alpha amylase, catalytic domain 176 258 1.4E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 628 3.3E-267 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 SUPERFAMILY SSF51445 133 555 1.64E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu4073 32f730b3689612ea1c99b6327a9bfe7d 651 SUPERFAMILY SSF81296 7 124 4.76E-33 T 14-10-2018 IPR014756 Immunoglobulin E-set Atu2535 9d925f734f433bd624ef6588a78b8067 478 SUPERFAMILY SSF55874 318 460 2.23E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2535 9d925f734f433bd624ef6588a78b8067 478 SMART SM00387 365 469 2.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2535 9d925f734f433bd624ef6588a78b8067 478 SUPERFAMILY SSF47384 246 315 1.59E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu2535 9d925f734f433bd624ef6588a78b8067 478 Gene3D G3DSA:1.10.287.130 213 319 2.6E-15 T 14-10-2018 Atu2535 9d925f734f433bd624ef6588a78b8067 478 SMART SM00388 263 321 8.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2535 9d925f734f433bd624ef6588a78b8067 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2535 9d925f734f433bd624ef6588a78b8067 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2535 9d925f734f433bd624ef6588a78b8067 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 2.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2535 9d925f734f433bd624ef6588a78b8067 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 314 5.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2535 9d925f734f433bd624ef6588a78b8067 478 Gene3D G3DSA:3.30.565.10 324 469 6.8E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2535 9d925f734f433bd624ef6588a78b8067 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 464 8.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Gene3D G3DSA:3.30.930.30 2 221 5.2E-66 T 14-10-2018 Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 SUPERFAMILY SSF52540 286 555 3.23E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Gene3D G3DSA:2.30.30.940 614 693 2.4E-58 T 14-10-2018 Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Gene3D G3DSA:3.40.50.300 534 736 2.4E-58 T 14-10-2018 Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Gene3D G3DSA:3.40.50.300 378 533 2.4E-58 T 14-10-2018 Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 TIGRFAM TIGR02768 TraA_Ti: Ti-type conjugative transfer relaxase TraA 1 781 0.0 T 14-10-2018 IPR014136 Ti-type conjugative transfer relaxase TraA Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Pfam PF03389 MobA/MobL family 17 243 4.4E-76 T 14-10-2018 IPR005053 MobA/MobL protein Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 SUPERFAMILY SSF52540 489 738 3.36E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Pfam PF13538 UvrD-like helicase C-terminal domain 692 733 1.9E-6 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain Atu6127 86766a3ff3b27027476f42aeab13f10f 1100 Pfam PF13604 AAA domain 382 566 1.1E-54 T 14-10-2018 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 Pfam PF02954 Bacterial regulatory protein, Fis family 276 316 5.2E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 SUPERFAMILY SSF46689 276 318 3.33E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 Gene3D G3DSA:1.10.10.60 275 318 1.8E-16 T 14-10-2018 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 Gene3D G3DSA:3.30.450.40 13 202 3.0E-46 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 SUPERFAMILY SSF55781 62 205 1.42E-12 T 14-10-2018 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 Pfam PF01590 GAF domain 75 198 3.1E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 282 299 2.3E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu2225 84267b7dd845db59144bb8f91cca4dbb 319 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 299 319 2.3E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1452 8917578fcf1426dd449ac55143b15c32 281 Gene3D G3DSA:1.10.287.1080 3 127 2.0E-47 T 14-10-2018 Atu1452 8917578fcf1426dd449ac55143b15c32 281 TIGRFAM TIGR00444 mazG: MazG family protein 13 270 1.3E-90 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Atu1452 8917578fcf1426dd449ac55143b15c32 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 180 242 3.4E-8 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Atu1452 8917578fcf1426dd449ac55143b15c32 281 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 2.8E-30 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Atu1452 8917578fcf1426dd449ac55143b15c32 281 SUPERFAMILY SSF101386 5 107 2.22E-25 T 14-10-2018 Atu1452 8917578fcf1426dd449ac55143b15c32 281 SUPERFAMILY SSF101386 153 250 4.86E-25 T 14-10-2018 Atu1452 8917578fcf1426dd449ac55143b15c32 281 Gene3D G3DSA:1.10.287.1080 145 275 3.7E-44 T 14-10-2018 Atu0718 d052dbace6848734abeb5b272e1d8012 153 SUPERFAMILY SSF50475 3 122 3.07E-17 T 14-10-2018 Atu0718 d052dbace6848734abeb5b272e1d8012 153 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 88 3.8E-15 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0718 d052dbace6848734abeb5b272e1d8012 153 Gene3D G3DSA:2.30.110.10 1 122 6.2E-23 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu1652 863821ee64ac11035871a20a45f53727 771 Pfam PF00390 Malic enzyme, N-terminal domain 32 164 6.2E-27 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Atu1652 863821ee64ac11035871a20a45f53727 771 PIRSF PIRSF036684 11 770 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 Atu1652 863821ee64ac11035871a20a45f53727 771 Gene3D G3DSA:3.40.50.10380 10 173 3.2E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Atu1652 863821ee64ac11035871a20a45f53727 771 SUPERFAMILY SSF53659 442 766 1.69E-88 T 14-10-2018 Atu1652 863821ee64ac11035871a20a45f53727 771 Gene3D G3DSA:3.40.50.10950 459 762 3.6E-89 T 14-10-2018 Atu1652 863821ee64ac11035871a20a45f53727 771 Gene3D G3DSA:3.40.50.720 174 458 2.4E-79 T 14-10-2018 Atu1652 863821ee64ac11035871a20a45f53727 771 Gene3D G3DSA:3.40.50.10750 586 739 3.6E-89 T 14-10-2018 Atu1652 863821ee64ac11035871a20a45f53727 771 SUPERFAMILY SSF53223 23 174 6.76E-53 T 14-10-2018 Atu1652 863821ee64ac11035871a20a45f53727 771 Pfam PF01515 Phosphate acetyl/butaryl transferase 442 763 6.6E-102 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Atu1652 863821ee64ac11035871a20a45f53727 771 SUPERFAMILY SSF51735 176 454 1.91E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1652 863821ee64ac11035871a20a45f53727 771 SMART SM00919 176 413 3.1E-136 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Atu1652 863821ee64ac11035871a20a45f53727 771 Pfam PF03949 Malic enzyme, NAD binding domain 178 372 1.9E-20 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Atu1652 863821ee64ac11035871a20a45f53727 771 SMART SM01274 31 164 2.1E-77 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Atu5274 e2b2c2a9187397cc0bec249fd7f3a6e0 299 SUPERFAMILY SSF46689 247 294 2.99E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5274 e2b2c2a9187397cc0bec249fd7f3a6e0 299 Gene3D G3DSA:1.10.10.60 196 298 4.2E-24 T 14-10-2018 Atu5274 e2b2c2a9187397cc0bec249fd7f3a6e0 299 Pfam PF12833 Helix-turn-helix domain 217 294 1.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5274 e2b2c2a9187397cc0bec249fd7f3a6e0 299 Pfam PF12852 Cupin 3 178 7.9E-23 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Atu5274 e2b2c2a9187397cc0bec249fd7f3a6e0 299 SUPERFAMILY SSF46689 195 244 7.89E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5274 e2b2c2a9187397cc0bec249fd7f3a6e0 299 SMART SM00342 211 293 1.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1317 8be4a73fbe02e324191e1a925749fec3 366 Pfam PF13483 Beta-lactamase superfamily domain 134 330 1.8E-21 T 14-10-2018 Atu1317 8be4a73fbe02e324191e1a925749fec3 366 Gene3D G3DSA:3.60.15.10 133 366 7.0E-58 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu1317 8be4a73fbe02e324191e1a925749fec3 366 SMART SM00849 139 330 2.2E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu1317 8be4a73fbe02e324191e1a925749fec3 366 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 133 366 36.511 T 14-10-2018 IPR022877 Protein of unknown funcion UPF0173 Atu1317 8be4a73fbe02e324191e1a925749fec3 366 SUPERFAMILY SSF56281 132 353 2.3E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Gene3D G3DSA:1.10.10.10 600 684 4.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 447 671 2.3E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 474 487 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 643 669 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 SUPERFAMILY SSF88659 523 596 3.4E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 446 682 6.5E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Gene3D G3DSA:1.10.601.10 142 519 9.4E-113 T 14-10-2018 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Gene3D G3DSA:1.10.10.10 523 598 2.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 18 683 46.727 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Pfam PF04545 Sigma-70, region 4 618 671 1.8E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Pfam PF04546 Sigma-70, non-essential region 169 418 1.7E-43 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Pfam PF00140 Sigma-70 factor, region 1.2 127 159 1.2E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Pfam PF04542 Sigma-70 region 2 450 519 2.0E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Pfam PF03979 Sigma-70 factor, region 1.1 27 99 2.2E-22 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 SUPERFAMILY SSF88659 580 682 3.92E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 PRINTS PR00046 Major sigma-70 factor signature 474 487 6.6E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 PRINTS PR00046 Major sigma-70 factor signature 498 506 6.6E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 PRINTS PR00046 Major sigma-70 factor signature 622 634 6.6E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 PRINTS PR00046 Major sigma-70 factor signature 658 669 6.6E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 PRINTS PR00046 Major sigma-70 factor signature 643 658 6.6E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Pfam PF04539 Sigma-70 region 3 529 604 2.8E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 Gene3D G3DSA:1.10.220.120 27 85 9.2E-21 T 14-10-2018 Atu2167 6da034058d8b1a5bebdb8d7ae39439f2 684 SUPERFAMILY SSF88946 144 517 8.32E-98 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 SUPERFAMILY SSF52540 295 519 1.21E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 Pfam PF00005 ABC transporter 24 182 2.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 SUPERFAMILY SSF52540 19 254 1.3E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 Gene3D G3DSA:3.40.50.300 4 276 7.4E-83 T 14-10-2018 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 Gene3D G3DSA:3.40.50.300 277 543 1.7E-83 T 14-10-2018 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 532 7.3E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 265 4.6E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 Pfam PF00005 ABC transporter 300 447 3.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 SMART SM00382 309 497 4.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3377 de6c6d0a3a4047650f3d86c6ae9f0a5d 544 SMART SM00382 33 232 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2830 e0c86410157e23c12aadf5b1742dc99d 205 Pfam PF02527 rRNA small subunit methyltransferase G 13 187 1.9E-32 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atu2830 e0c86410157e23c12aadf5b1742dc99d 205 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 5 204 22.935 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atu2830 e0c86410157e23c12aadf5b1742dc99d 205 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 17 188 2.5E-31 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atu2830 e0c86410157e23c12aadf5b1742dc99d 205 SUPERFAMILY SSF53335 3 180 5.23E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2830 e0c86410157e23c12aadf5b1742dc99d 205 Gene3D G3DSA:3.40.50.150 1 200 2.6E-40 T 14-10-2018 Atu2830 e0c86410157e23c12aadf5b1742dc99d 205 PIRSF PIRSF003078 1 198 1.3E-39 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Atu0113 a4479c19c979a10d655f581acd01084d 622 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 8.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0113 a4479c19c979a10d655f581acd01084d 622 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 557 8.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0113 a4479c19c979a10d655f581acd01084d 622 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 8.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0113 a4479c19c979a10d655f581acd01084d 622 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 571 8.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0113 a4479c19c979a10d655f581acd01084d 622 SMART SM00387 504 614 1.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0113 a4479c19c979a10d655f581acd01084d 622 Gene3D G3DSA:3.30.450.20 69 190 1.3E-70 T 14-10-2018 Atu0113 a4479c19c979a10d655f581acd01084d 622 PIRSF PIRSF036431 2 621 2.5E-227 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) Atu0113 a4479c19c979a10d655f581acd01084d 622 Gene3D G3DSA:3.30.450.20 58 294 1.3E-70 T 14-10-2018 Atu0113 a4479c19c979a10d655f581acd01084d 622 Gene3D G3DSA:1.10.287.130 370 457 4.1E-19 T 14-10-2018 Atu0113 a4479c19c979a10d655f581acd01084d 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 612 2.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0113 a4479c19c979a10d655f581acd01084d 622 Pfam PF02743 Cache domain 56 293 1.1E-13 T 14-10-2018 IPR033479 Double Cache domain 1 Atu0113 a4479c19c979a10d655f581acd01084d 622 SUPERFAMILY SSF47384 391 461 7.65E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0113 a4479c19c979a10d655f581acd01084d 622 SUPERFAMILY SSF55874 453 613 4.58E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0113 a4479c19c979a10d655f581acd01084d 622 SMART SM00388 394 462 6.4E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0113 a4479c19c979a10d655f581acd01084d 622 Gene3D G3DSA:3.30.565.10 461 619 1.7E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0113 a4479c19c979a10d655f581acd01084d 622 SUPERFAMILY SSF103190 68 199 3.06E-19 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Atu0113 a4479c19c979a10d655f581acd01084d 622 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 459 1.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Hamap MF_00203 UvrABC system protein C [uvrC]. 16 635 27.196 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 SUPERFAMILY SSF46600 202 255 1.83E-12 T 14-10-2018 IPR036876 UVR domain superfamily Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Gene3D G3DSA:3.40.1440.10 17 114 2.7E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 SUPERFAMILY SSF47781 550 638 2.32E-21 T 14-10-2018 IPR010994 RuvA domain 2-like Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 394 570 1.1E-50 T 14-10-2018 IPR001162 UvrC family homology region Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 SMART SM00278 584 603 96.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 SMART SM00278 616 635 1.5 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Gene3D G3DSA:1.10.150.20 578 636 1.3E-18 T 14-10-2018 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Pfam PF02151 UvrB/uvrC motif 221 249 1.2E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 SMART SM00465 29 110 6.1E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Pfam PF01541 GIY-YIG catalytic domain 31 104 1.2E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 SUPERFAMILY SSF82771 28 112 4.58E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 22 616 5.8E-168 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Atu1129 4d54f3791e483895a7c5eef3f601c6c4 642 Gene3D G3DSA:3.30.420.340 387 577 1.1E-47 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily Atu2213 14e153adf4d4ecc41ddf3dfcf0ac8391 280 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 18 271 1.2E-75 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atu2213 14e153adf4d4ecc41ddf3dfcf0ac8391 280 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 15 277 19.015 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atu2213 14e153adf4d4ecc41ddf3dfcf0ac8391 280 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 11 276 2.7E-70 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atu2213 14e153adf4d4ecc41ddf3dfcf0ac8391 280 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 153 165 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 336 1.4E-43 T 14-10-2018 IPR000160 GGDEF domain Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 Pfam PF01590 GAF domain 32 156 4.4E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 SMART SM00065 27 169 1.1E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 Gene3D G3DSA:3.30.70.270 173 341 7.1E-53 T 14-10-2018 Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 SMART SM00267 168 340 1.0E-56 T 14-10-2018 IPR000160 GGDEF domain Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 SUPERFAMILY SSF55781 32 162 1.35E-18 T 14-10-2018 Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 338 6.4E-43 T 14-10-2018 IPR000160 GGDEF domain Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 SUPERFAMILY SSF55073 184 338 2.75E-44 T 14-10-2018 IPR029787 Nucleotide cyclase Atu1112 6a8118f7f50ac4b93bbdcc27171b1990 342 Gene3D G3DSA:3.30.450.40 3 165 8.6E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu2126 1ddaf9cb56c6dc28222472130076554e 325 SUPERFAMILY SSF53474 14 302 2.01E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2126 1ddaf9cb56c6dc28222472130076554e 325 Gene3D G3DSA:3.40.50.1820 3 317 8.5E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2126 1ddaf9cb56c6dc28222472130076554e 325 Pfam PF12146 Serine aminopeptidase, S33 36 297 7.6E-57 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu2365 48c2b3c754a674674607f5b70d4b91a9 256 Gene3D G3DSA:3.40.190.10 29 248 9.0E-67 T 14-10-2018 Atu2365 48c2b3c754a674674607f5b70d4b91a9 256 Gene3D G3DSA:3.40.190.10 110 209 9.0E-67 T 14-10-2018 Atu2365 48c2b3c754a674674607f5b70d4b91a9 256 SMART SM00062 23 252 7.1E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu2365 48c2b3c754a674674607f5b70d4b91a9 256 SUPERFAMILY SSF53850 2 253 7.97E-61 T 14-10-2018 Atu2365 48c2b3c754a674674607f5b70d4b91a9 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 250 5.7E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3251 eaee301cee80816263ed9ec1f6620686 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 190 1.1E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu3251 eaee301cee80816263ed9ec1f6620686 228 ProSitePatterns PS01228 Hypothetical cof family signature 1. 18 29 - T 14-10-2018 Atu3251 eaee301cee80816263ed9ec1f6620686 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 189 1.3E-22 T 14-10-2018 Atu3251 eaee301cee80816263ed9ec1f6620686 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 169 3.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu3251 eaee301cee80816263ed9ec1f6620686 228 Gene3D G3DSA:1.10.150.240 31 91 8.8E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu3251 eaee301cee80816263ed9ec1f6620686 228 Gene3D G3DSA:3.40.50.1000 17 195 8.8E-52 T 14-10-2018 IPR023214 HAD superfamily Atu3251 eaee301cee80816263ed9ec1f6620686 228 SUPERFAMILY SSF56784 17 211 2.28E-41 T 14-10-2018 IPR036412 HAD-like superfamily Atu3084 662bac4694c37e3d870c5f20fa908240 180 SUPERFAMILY SSF88659 124 177 1.87E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu3084 662bac4694c37e3d870c5f20fa908240 180 Pfam PF04542 Sigma-70 region 2 24 91 7.5E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu3084 662bac4694c37e3d870c5f20fa908240 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 175 1.1E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu3084 662bac4694c37e3d870c5f20fa908240 180 Gene3D G3DSA:1.10.1740.10 3 117 1.1E-26 T 14-10-2018 Atu3084 662bac4694c37e3d870c5f20fa908240 180 Gene3D G3DSA:1.10.10.10 118 179 1.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3084 662bac4694c37e3d870c5f20fa908240 180 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu3084 662bac4694c37e3d870c5f20fa908240 180 Pfam PF08281 Sigma-70, region 4 119 171 1.7E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu3084 662bac4694c37e3d870c5f20fa908240 180 SUPERFAMILY SSF88946 4 96 1.73E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu4287 8c32b379973ba526d75f6625c7678aea 230 SUPERFAMILY SSF52317 9 228 8.99E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4287 8c32b379973ba526d75f6625c7678aea 230 Pfam PF01965 DJ-1/PfpI family 33 218 4.5E-16 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu4287 8c32b379973ba526d75f6625c7678aea 230 Gene3D G3DSA:3.40.50.880 8 228 3.5E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3204 f15365919985bfdef2058e0475e5583d 525 SUPERFAMILY SSF55073 352 494 7.69E-31 T 14-10-2018 IPR029787 Nucleotide cyclase Atu3204 f15365919985bfdef2058e0475e5583d 525 Gene3D G3DSA:3.30.450.20 235 341 2.8E-9 T 14-10-2018 Atu3204 f15365919985bfdef2058e0475e5583d 525 Gene3D G3DSA:3.30.450.20 72 188 8.1E-7 T 14-10-2018 Atu3204 f15365919985bfdef2058e0475e5583d 525 SUPERFAMILY SSF55785 80 181 4.57E-6 T 14-10-2018 IPR035965 PAS domain superfamily Atu3204 f15365919985bfdef2058e0475e5583d 525 SMART SM00267 336 498 2.3E-35 T 14-10-2018 IPR000160 GGDEF domain Atu3204 f15365919985bfdef2058e0475e5583d 525 Pfam PF08448 PAS fold 240 337 3.2E-6 T 14-10-2018 IPR013656 PAS fold-4 Atu3204 f15365919985bfdef2058e0475e5583d 525 Pfam PF13188 PAS domain 33 116 0.049 T 14-10-2018 IPR000014 PAS domain Atu3204 f15365919985bfdef2058e0475e5583d 525 Gene3D G3DSA:3.30.70.270 342 499 1.7E-37 T 14-10-2018 Atu3204 f15365919985bfdef2058e0475e5583d 525 SUPERFAMILY SSF55785 241 343 7.04E-12 T 14-10-2018 IPR035965 PAS domain superfamily Atu3204 f15365919985bfdef2058e0475e5583d 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 494 1.3E-29 T 14-10-2018 IPR000160 GGDEF domain Atu3204 f15365919985bfdef2058e0475e5583d 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 494 1.0E-32 T 14-10-2018 IPR000160 GGDEF domain Atu3346 dffb62f646474e50b9b5d98a74700107 236 PIRSF PIRSF006293 1 221 3.9E-76 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atu3346 dffb62f646474e50b9b5d98a74700107 236 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 1 215 47.64 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atu3346 dffb62f646474e50b9b5d98a74700107 236 SUPERFAMILY SSF52402 1 223 3.09E-59 T 14-10-2018 Atu3346 dffb62f646474e50b9b5d98a74700107 236 Pfam PF06508 Queuosine biosynthesis protein QueC 2 208 3.6E-55 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atu3346 dffb62f646474e50b9b5d98a74700107 236 Gene3D G3DSA:3.40.50.620 1 216 1.1E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3346 dffb62f646474e50b9b5d98a74700107 236 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 202 2.5E-54 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Atu5066 4cc13f68e4d1ddb7c6ecdfe77f10b6b4 255 Pfam PF12697 Alpha/beta hydrolase family 28 248 6.2E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5066 4cc13f68e4d1ddb7c6ecdfe77f10b6b4 255 SUPERFAMILY SSF53474 22 252 1.11E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5066 4cc13f68e4d1ddb7c6ecdfe77f10b6b4 255 Gene3D G3DSA:3.40.50.1820 18 255 4.2E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:3.30.70.1430 577 678 0.0 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Pfam PF00873 AcrB/AcrD/AcrF family 3 1037 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82693 137 333 4.01E-29 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82866 841 1037 1.07E-45 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1044 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82714 185 274 2.49E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82714 732 816 9.02E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 6.0E-92 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82866 299 499 7.32E-54 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82693 682 867 6.02E-29 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82693 575 681 1.83E-26 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 SUPERFAMILY SSF82693 41 134 6.54E-26 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:3.30.70.1430 40 827 0.0 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:3.30.2090.10 731 819 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:1.20.1640.10 523 1033 0.0 T 14-10-2018 Atu2483 b8a41dde0ef66f0052dc065963cfb918 1064 Gene3D G3DSA:3.30.70.1440 679 876 0.0 T 14-10-2018 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 Pfam PF01047 MarR family 49 110 8.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Atu0272 52dfb906358741b2b83c01cc4b274e78 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 Gene3D G3DSA:1.10.10.10 1 160 6.9E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0272 52dfb906358741b2b83c01cc4b274e78 161 SMART SM00347 42 145 3.7E-29 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0272 52dfb906358741b2b83c01cc4b274e78 161 SUPERFAMILY SSF46785 10 160 6.31E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3340 9793b0063ea75b0e1ea381d069d5d15d 277 SUPERFAMILY SSF161098 7 277 2.24E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu3340 9793b0063ea75b0e1ea381d069d5d15d 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 269 5.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3340 9793b0063ea75b0e1ea381d069d5d15d 277 Gene3D G3DSA:1.10.3720.10 5 268 7.3E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu6176 0994c72474f851e0ad71468e2f60c9cb 377 Gene3D G3DSA:2.40.128.260 174 301 6.5E-38 T 14-10-2018 Atu6176 0994c72474f851e0ad71468e2f60c9cb 377 Gene3D G3DSA:2.40.128.260 302 366 1.0E-10 T 14-10-2018 Atu6176 0994c72474f851e0ad71468e2f60c9cb 377 Pfam PF03743 Bacterial conjugation TrbI-like protein 181 357 3.3E-50 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Atu8163 301af62278cfae37b5a488128ea9cdcb 205 Gene3D G3DSA:2.40.10.220 119 205 4.7E-6 T 14-10-2018 Atu8163 301af62278cfae37b5a488128ea9cdcb 205 Pfam PF07238 PilZ domain 121 199 1.2E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 Atu8163 301af62278cfae37b5a488128ea9cdcb 205 SUPERFAMILY SSF141371 119 195 1.31E-6 T 14-10-2018 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 200 2.1E-83 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 Gene3D G3DSA:3.90.870.10 1 208 1.2E-87 T 14-10-2018 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 SUPERFAMILY SSF142695 207 361 4.05E-40 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 201 1.1E-72 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 SUPERFAMILY SSF55821 5 204 7.55E-80 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 205 37.199 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 Pfam PF00925 GTP cyclohydrolase II 213 361 2.8E-29 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Atu0753 81a7894e16a3c7165ee0f914bba7b834 366 PIRSF PIRSF001259 3 366 2.9E-140 T 14-10-2018 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 9.9E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 Pfam PF00072 Response regulator receiver domain 3 112 2.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 Gene3D G3DSA:3.40.50.2300 1 121 2.9E-37 T 14-10-2018 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 SUPERFAMILY SSF46894 119 217 1.36E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 SUPERFAMILY SSF52172 1 118 7.4E-35 T 14-10-2018 IPR011006 CheY-like superfamily Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 SMART SM00862 145 216 1.3E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 SMART SM00448 1 112 7.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4712 9d9688d2a40d45f618eb4d0299885c62 220 Gene3D G3DSA:1.10.10.10 123 220 3.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 SUPERFAMILY SSF48208 2318 2809 4.54E-99 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2342 2768 1.0E-117 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Pfam PF10091 Putative glucoamylase 1298 1505 5.4E-14 T 14-10-2018 IPR019282 Domain of unknown function DUF2329 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 SMART SM01068 1534 1595 3.6E-19 T 14-10-2018 IPR009342 Putative carbohydrate binding domain Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 SMART SM01068 2048 2113 7.4E-34 T 14-10-2018 IPR009342 Putative carbohydrate binding domain Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Gene3D G3DSA:2.60.420.10 2351 2822 2.1E-184 T 14-10-2018 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 SUPERFAMILY SSF74650 2048 2314 1.57E-85 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Gene3D G3DSA:1.50.10.140 1247 1519 1.1E-11 T 14-10-2018 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Gene3D G3DSA:2.70.98.40 1546 1839 6.6E-68 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Gene3D G3DSA:2.70.98.40 2049 2345 2.3E-82 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 SUPERFAMILY SSF74650 1548 1808 9.1E-77 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Pfam PF06165 Glycosyltransferase family 36 1560 1805 3.1E-62 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Pfam PF06165 Glycosyltransferase family 36 2071 2312 2.5E-68 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Gene3D G3DSA:1.50.10.140 988 1127 1.3E-14 T 14-10-2018 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 Gene3D G3DSA:1.50.10.10 2356 2769 2.1E-184 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu2730 f08e441f2151287653d05fa8b6b0bc48 2831 SUPERFAMILY SSF53448 615 823 2.06E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4030 15bdb85d984713aa2797a95215de37bb 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 304 5.2E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 Gene3D G3DSA:3.30.390.10 1 106 1.0E-26 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 SMART SM00922 156 266 7.1E-14 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 109 2.6E-17 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 SUPERFAMILY SSF51604 97 390 3.01E-67 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 Pfam PF13378 Enolase C-terminal domain-like 162 384 3.7E-49 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 Gene3D G3DSA:3.20.20.120 107 378 6.9E-89 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu1406 5581254a9e8932e2a2a8f4f5171669a0 400 SUPERFAMILY SSF54826 1 113 1.69E-28 T 14-10-2018 Atu2080 60da3f0fc29156febeaff3451362f10b 177 Pfam PF00583 Acetyltransferase (GNAT) family 61 151 5.8E-15 T 14-10-2018 IPR000182 GNAT domain Atu2080 60da3f0fc29156febeaff3451362f10b 177 SUPERFAMILY SSF55729 17 177 1.15E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2080 60da3f0fc29156febeaff3451362f10b 177 Gene3D G3DSA:3.40.630.30 15 177 4.3E-42 T 14-10-2018 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 Gene3D G3DSA:3.40.440.10 5 259 2.6E-94 T 14-10-2018 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 SMART SM00788 3 425 4.2E-284 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 Gene3D G3DSA:3.90.170.10 268 432 8.1E-68 T 14-10-2018 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 430 6.4E-161 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 Gene3D G3DSA:1.10.300.10 102 202 2.6E-94 T 14-10-2018 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 SUPERFAMILY SSF52540 1 426 5.74E-169 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 135 146 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 Pfam PF00709 Adenylosuccinate synthetase 4 424 4.9E-172 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atu2447 08129a1f5f1c7b16eb2138d67394091e 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 211.01 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Atu1310 303828817f1f894fa180634ce27dcd5a 550 SUPERFAMILY SSF56645 55 299 3.38E-37 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu1310 303828817f1f894fa180634ce27dcd5a 550 Gene3D G3DSA:1.20.140.10 291 447 7.5E-41 T 14-10-2018 Atu1310 303828817f1f894fa180634ce27dcd5a 550 SUPERFAMILY SSF47203 288 447 3.38E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu1310 303828817f1f894fa180634ce27dcd5a 550 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 445 2.0E-31 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu1310 303828817f1f894fa180634ce27dcd5a 550 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 188 200 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu1310 303828817f1f894fa180634ce27dcd5a 550 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 186 280 2.3E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu1310 303828817f1f894fa180634ce27dcd5a 550 Gene3D G3DSA:2.40.110.20 136 290 6.0E-58 T 14-10-2018 Atu1310 303828817f1f894fa180634ce27dcd5a 550 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 404 423 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu4745 7943897056a18e871eccf740b6fc48e9 496 Gene3D G3DSA:3.40.50.300 252 493 1.9E-43 T 14-10-2018 Atu4745 7943897056a18e871eccf740b6fc48e9 496 Gene3D G3DSA:3.40.50.300 4 251 2.8E-58 T 14-10-2018 Atu4745 7943897056a18e871eccf740b6fc48e9 496 Pfam PF00005 ABC transporter 273 426 2.0E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4745 7943897056a18e871eccf740b6fc48e9 496 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4745 7943897056a18e871eccf740b6fc48e9 496 SMART SM00382 281 475 6.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4745 7943897056a18e871eccf740b6fc48e9 496 SMART SM00382 31 221 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4745 7943897056a18e871eccf740b6fc48e9 496 SUPERFAMILY SSF52540 4 233 1.28E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4745 7943897056a18e871eccf740b6fc48e9 496 Pfam PF00005 ABC transporter 22 173 7.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4745 7943897056a18e871eccf740b6fc48e9 496 SUPERFAMILY SSF52540 272 485 1.74E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1181 d7777661c730e353711c73387d7c196c 177 SUPERFAMILY SSF46955 10 80 3.98E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu1181 d7777661c730e353711c73387d7c196c 177 Pfam PF13411 MerR HTH family regulatory protein 10 77 8.9E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1181 d7777661c730e353711c73387d7c196c 177 Gene3D G3DSA:1.10.1660.10 4 79 6.3E-21 T 14-10-2018 Atu1181 d7777661c730e353711c73387d7c196c 177 SMART SM00422 10 79 1.3E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu2014 886ffd01ee3c704e4ae415f9b3153764 327 Gene3D G3DSA:3.40.190.10 129 303 9.4E-72 T 14-10-2018 Atu2014 886ffd01ee3c704e4ae415f9b3153764 327 SUPERFAMILY SSF53850 22 318 9.67E-70 T 14-10-2018 Atu2014 886ffd01ee3c704e4ae415f9b3153764 327 PIRSF PIRSF002825 1 323 7.8E-63 T 14-10-2018 IPR026045 Ferric binding protein Atu2014 886ffd01ee3c704e4ae415f9b3153764 327 Gene3D G3DSA:3.40.190.10 28 292 9.4E-72 T 14-10-2018 Atu2014 886ffd01ee3c704e4ae415f9b3153764 327 Pfam PF13343 Bacterial extracellular solute-binding protein 75 302 4.2E-32 T 14-10-2018 Atu4012 32b9e75d002477657c0f1b146f037084 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 232 2.4E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu4012 32b9e75d002477657c0f1b146f037084 330 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 4 327 1.2E-131 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase Atu4012 32b9e75d002477657c0f1b146f037084 330 Gene3D G3DSA:3.30.360.10 139 267 3.3E-105 T 14-10-2018 Atu4012 32b9e75d002477657c0f1b146f037084 330 SUPERFAMILY SSF51735 4 148 1.89E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4012 32b9e75d002477657c0f1b146f037084 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 1.2E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu4012 32b9e75d002477657c0f1b146f037084 330 Gene3D G3DSA:3.40.50.720 4 318 3.3E-105 T 14-10-2018 Atu4012 32b9e75d002477657c0f1b146f037084 330 SUPERFAMILY SSF55347 125 291 1.07E-38 T 14-10-2018 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 344 39.159 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 SMART SM00448 5 124 9.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 Gene3D G3DSA:3.40.50.2300 5 115 4.1E-31 T 14-10-2018 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 SUPERFAMILY SSF52172 6 129 1.71E-28 T 14-10-2018 IPR011006 CheY-like superfamily Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 Pfam PF01339 CheB methylesterase 161 339 5.8E-59 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 SUPERFAMILY SSF52738 158 343 3.01E-67 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 PIRSF PIRSF000876 2 348 6.9E-134 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 Pfam PF00072 Response regulator receiver domain 7 110 5.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0519 c10df713d82d4cfa8a14d1ae3132678c 351 Gene3D G3DSA:3.40.50.180 151 348 6.7E-72 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 Gene3D G3DSA:3.30.43.10 5 100 4.3E-19 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 Pfam PF01565 FAD binding domain 48 184 3.7E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 SUPERFAMILY SSF56176 14 224 1.67E-69 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 471 4.2E-40 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 Gene3D G3DSA:3.30.70.2740 347 433 6.3E-24 T 14-10-2018 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 SUPERFAMILY SSF55103 198 475 1.08E-51 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 Gene3D G3DSA:3.30.465.10 102 223 1.4E-44 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu2739 f0c090c96b16a70fbf4b2f4d80318e39 480 Gene3D G3DSA:3.30.70.2190 224 345 1.1E-32 T 14-10-2018 Atu0539 2a146b488935872abb49862e2d3f6e0e 430 Gene3D G3DSA:3.65.10.10 6 423 6.7E-157 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atu0539 2a146b488935872abb49862e2d3f6e0e 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 418 7.4E-93 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Atu0539 2a146b488935872abb49862e2d3f6e0e 430 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 428 43.177 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu0539 2a146b488935872abb49862e2d3f6e0e 430 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 427 1.0E-163 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu0539 2a146b488935872abb49862e2d3f6e0e 430 SUPERFAMILY SSF55205 1 429 1.8E-129 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Atu0539 2a146b488935872abb49862e2d3f6e0e 430 Gene3D G3DSA:3.65.10.10 21 240 6.7E-157 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atu3761 790013c2cf74a628ede49a09406b85f6 179 Pfam PF06282 Protein of unknown function (DUF1036) 57 169 1.2E-42 T 14-10-2018 IPR009380 Protein of unknown function DUF1036 Atu4108 4ea1136d45cb00ad883e511bfea7c325 208 Pfam PF01612 3'-5' exonuclease 21 172 3.7E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atu4108 4ea1136d45cb00ad883e511bfea7c325 208 SUPERFAMILY SSF53098 21 195 4.0E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu4108 4ea1136d45cb00ad883e511bfea7c325 208 Gene3D G3DSA:3.30.420.10 9 193 3.8E-43 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu4108 4ea1136d45cb00ad883e511bfea7c325 208 SMART SM00474 5 173 5.9E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atu3772 de50b2948698013645d605c341cc0561 349 PRINTS PR00721 Stomatin signature 79 100 6.6E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Atu3772 de50b2948698013645d605c341cc0561 349 PRINTS PR00721 Stomatin signature 114 131 6.6E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Atu3772 de50b2948698013645d605c341cc0561 349 PRINTS PR00721 Stomatin signature 177 198 6.6E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Atu3772 de50b2948698013645d605c341cc0561 349 PRINTS PR00721 Stomatin signature 158 176 6.6E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Atu3772 de50b2948698013645d605c341cc0561 349 PRINTS PR00721 Stomatin signature 134 157 6.6E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Atu3772 de50b2948698013645d605c341cc0561 349 PRINTS PR00721 Stomatin signature 31 53 6.6E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Atu3772 de50b2948698013645d605c341cc0561 349 Gene3D G3DSA:3.30.479.30 52 184 2.3E-39 T 14-10-2018 Atu3772 de50b2948698013645d605c341cc0561 349 Pfam PF01145 SPFH domain / Band 7 family 28 197 2.3E-34 T 14-10-2018 IPR001107 Band 7 domain Atu3772 de50b2948698013645d605c341cc0561 349 SMART SM00244 24 182 8.7E-57 T 14-10-2018 IPR001107 Band 7 domain Atu3772 de50b2948698013645d605c341cc0561 349 SUPERFAMILY SSF117892 55 189 6.02E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Atu3081 77bdad6686b0eb23ddc54f15c3f69b42 497 Pfam PF08811 Protein of unknown function (DUF1800) 17 496 7.5E-127 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 Atu1003 f5b0b5e77d36db28139c136a57eeb3d0 156 Gene3D G3DSA:3.30.300.20 2 150 3.1E-52 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu1003 f5b0b5e77d36db28139c136a57eeb3d0 156 Pfam PF02566 OsmC-like protein 52 149 1.7E-15 T 14-10-2018 IPR003718 OsmC/Ohr family Atu1003 f5b0b5e77d36db28139c136a57eeb3d0 156 SUPERFAMILY SSF82784 5 150 4.97E-46 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Atu1116 420aab631956af163e57a3cb313dbf60 202 SUPERFAMILY SSF52172 4 148 6.97E-28 T 14-10-2018 IPR011006 CheY-like superfamily Atu1116 420aab631956af163e57a3cb313dbf60 202 SMART SM00421 138 195 9.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1116 420aab631956af163e57a3cb313dbf60 202 SMART SM00448 3 114 2.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1116 420aab631956af163e57a3cb313dbf60 202 Gene3D G3DSA:1.10.10.10 132 199 9.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1116 420aab631956af163e57a3cb313dbf60 202 Pfam PF00072 Response regulator receiver domain 5 115 2.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1116 420aab631956af163e57a3cb313dbf60 202 SUPERFAMILY SSF46894 129 199 1.77E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu1116 420aab631956af163e57a3cb313dbf60 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1116 420aab631956af163e57a3cb313dbf60 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1116 420aab631956af163e57a3cb313dbf60 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1116 420aab631956af163e57a3cb313dbf60 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 3.0E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1116 420aab631956af163e57a3cb313dbf60 202 Gene3D G3DSA:3.40.50.2300 2 127 3.3E-36 T 14-10-2018 Atu1116 420aab631956af163e57a3cb313dbf60 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 8.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 221 1.4E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 1.4E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 227 235 1.4E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 1.4E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 42 1.4E-16 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 17 289 3.2E-50 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 Gene3D G3DSA:3.40.50.620 8 299 1.2E-81 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3589 b20ba803b49695ce284c7ae219cc8bb1 299 SUPERFAMILY SSF52374 14 297 6.7E-81 T 14-10-2018 Atu0690 ccfdd5e535420485daee0806b14fa91e 185 Gene3D G3DSA:3.40.50.150 1 185 2.2E-47 T 14-10-2018 Atu0690 ccfdd5e535420485daee0806b14fa91e 185 PIRSF PIRSF004553 1 185 2.5E-46 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Atu0690 ccfdd5e535420485daee0806b14fa91e 185 Pfam PF03602 Conserved hypothetical protein 95 1 182 1.8E-47 T 14-10-2018 Atu0690 ccfdd5e535420485daee0806b14fa91e 185 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 2.0E-39 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Atu0690 ccfdd5e535420485daee0806b14fa91e 185 SUPERFAMILY SSF53335 1 182 2.31E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0690 ccfdd5e535420485daee0806b14fa91e 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu2316 442c276956448d23de35440dd4e65bd3 223 Pfam PF01925 Sulfite exporter TauE/SafE 1 215 3.8E-27 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SMART SM00028 249 282 1.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SMART SM00028 215 248 0.095 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SMART SM00028 79 112 9.4E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SMART SM00028 113 146 2.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SMART SM00028 147 180 0.034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SMART SM00028 181 214 6.7E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Gene3D G3DSA:1.25.40.10 235 293 4.0E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Pfam PF07719 Tetratricopeptide repeat 249 282 3.0E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 Atu4063 147d77abc2916305f46165c42bbd2a96 298 SUPERFAMILY SSF48452 63 289 1.01E-43 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Pfam PF00515 Tetratricopeptide repeat 80 112 1.6E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Pfam PF00515 Tetratricopeptide repeat 182 211 5.1E-8 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Gene3D G3DSA:1.25.40.10 54 146 2.5E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Pfam PF13181 Tetratricopeptide repeat 113 145 9.8E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Pfam PF13181 Tetratricopeptide repeat 152 177 0.099 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Pfam PF13181 Tetratricopeptide repeat 218 246 0.0083 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4063 147d77abc2916305f46165c42bbd2a96 298 Gene3D G3DSA:1.25.40.10 147 234 2.2E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 Gene3D G3DSA:2.60.120.10 108 193 2.0E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 SUPERFAMILY SSF51182 57 187 9.49E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 SMART SM00530 16 71 9.4E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 Pfam PF01381 Helix-turn-helix 17 70 2.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 Gene3D G3DSA:1.10.260.40 3 86 7.8E-22 T 14-10-2018 Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 SUPERFAMILY SSF47413 11 77 3.75E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu0245 2de2bafc3395f0890585c2bf46edcb68 193 Pfam PF07883 Cupin domain 117 187 2.8E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu2004 d5d2f37025216a981ba16d373b038b35 151 SUPERFAMILY SSF50346 62 124 1.31E-11 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Atu2004 d5d2f37025216a981ba16d373b038b35 151 Gene3D G3DSA:2.30.30.240 52 142 6.7E-22 T 14-10-2018 Atu2004 d5d2f37025216a981ba16d373b038b35 151 Pfam PF05239 PRC-barrel domain 61 138 2.1E-12 T 14-10-2018 IPR027275 PRC-barrel domain Atu1578 048e31b3b277ce93880183c86fd90288 398 SUPERFAMILY SSF161098 193 379 5.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu1578 048e31b3b277ce93880183c86fd90288 398 Gene3D G3DSA:1.10.3720.10 185 394 5.8E-29 T 14-10-2018 IPR035906 MetI-like superfamily Atu1578 048e31b3b277ce93880183c86fd90288 398 SUPERFAMILY SSF161098 90 203 3.79E-11 T 14-10-2018 IPR035906 MetI-like superfamily Atu1578 048e31b3b277ce93880183c86fd90288 398 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 89 152 5.1E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1578 048e31b3b277ce93880183c86fd90288 398 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 393 9.3E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2308 35787723a8400432c78c23579a9be1a3 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 258 3.9E-118 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 Atu2308 35787723a8400432c78c23579a9be1a3 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 256 3.1E-62 T 14-10-2018 Atu2308 35787723a8400432c78c23579a9be1a3 258 Gene3D G3DSA:3.40.50.720 1 258 7.8E-88 T 14-10-2018 Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 8.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 8.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.5E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 SUPERFAMILY SSF51735 3 257 4.5E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2308 35787723a8400432c78c23579a9be1a3 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2308 35787723a8400432c78c23579a9be1a3 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2525 8db8b83cf46d9730bb2e6007fb44f3f9 449 Gene3D G3DSA:1.20.1250.20 264 444 7.6E-24 T 14-10-2018 Atu2525 8db8b83cf46d9730bb2e6007fb44f3f9 449 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 112 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu2525 8db8b83cf46d9730bb2e6007fb44f3f9 449 Gene3D G3DSA:1.20.1250.20 34 239 1.3E-45 T 14-10-2018 Atu2525 8db8b83cf46d9730bb2e6007fb44f3f9 449 Pfam PF07690 Major Facilitator Superfamily 47 346 2.0E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2525 8db8b83cf46d9730bb2e6007fb44f3f9 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu2525 8db8b83cf46d9730bb2e6007fb44f3f9 449 SUPERFAMILY SSF103473 35 439 9.94E-74 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1858 8c695c9c05ededfbe13c983c2c7a3464 311 Gene3D G3DSA:3.40.50.620 39 290 1.3E-41 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1858 8c695c9c05ededfbe13c983c2c7a3464 311 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 40 301 51.545 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 Atu1858 8c695c9c05ededfbe13c983c2c7a3464 311 PIRSF PIRSF004976 18 306 1.7E-70 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Atu1858 8c695c9c05ededfbe13c983c2c7a3464 311 Pfam PF01171 PP-loop family 72 235 2.2E-14 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Atu1858 8c695c9c05ededfbe13c983c2c7a3464 311 SUPERFAMILY SSF52402 47 266 2.21E-50 T 14-10-2018 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 229 4.8E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 SUPERFAMILY SSF47203 245 392 6.77E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 Gene3D G3DSA:1.10.540.10 2 134 3.2E-38 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 387 8.8E-25 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 SUPERFAMILY SSF56645 7 241 9.69E-73 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 Gene3D G3DSA:1.20.140.10 243 395 4.5E-37 T 14-10-2018 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.2E-29 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 Gene3D G3DSA:2.40.110.10 135 241 3.0E-36 T 14-10-2018 Atu4418 a319fe3cf7ef393ef62309b9f613b259 395 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 138 150 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu0494 42352172807e0b53771fa982568c2231 792 Pfam PF00271 Helicase conserved C-terminal domain 215 316 1.5E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Atu0494 42352172807e0b53771fa982568c2231 792 Gene3D G3DSA:3.40.50.300 207 359 5.9E-26 T 14-10-2018 Atu0494 42352172807e0b53771fa982568c2231 792 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 2 786 0.0 T 14-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated Atu0494 42352172807e0b53771fa982568c2231 792 Pfam PF00270 DEAD/DEAH box helicase 1 161 8.3E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu0494 42352172807e0b53771fa982568c2231 792 SMART SM00487 1 185 1.3E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu0494 42352172807e0b53771fa982568c2231 792 Gene3D G3DSA:3.40.50.300 1 175 7.2E-42 T 14-10-2018 Atu0494 42352172807e0b53771fa982568c2231 792 Pfam PF08494 DEAD/H associated 569 758 2.4E-49 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 Atu0494 42352172807e0b53771fa982568c2231 792 SMART SM00490 236 321 1.0E-13 T 14-10-2018 IPR001650 Helicase, C-terminal Atu0494 42352172807e0b53771fa982568c2231 792 PIRSF PIRSF037307 1 792 1.6E-212 T 14-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 Atu0494 42352172807e0b53771fa982568c2231 792 SUPERFAMILY SSF52540 37 329 2.42E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5398 39cfdf6987c90e292eb3d69df4347ed2 309 Pfam PF00701 Dihydrodipicolinate synthetase family 6 229 6.1E-22 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5398 39cfdf6987c90e292eb3d69df4347ed2 309 PIRSF PIRSF001365 1 309 7.2E-54 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5398 39cfdf6987c90e292eb3d69df4347ed2 309 SUPERFAMILY SSF51569 2 270 1.36E-41 T 14-10-2018 Atu5398 39cfdf6987c90e292eb3d69df4347ed2 309 Gene3D G3DSA:3.20.20.70 5 276 1.4E-42 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu5398 39cfdf6987c90e292eb3d69df4347ed2 309 SMART SM01130 4 288 5.0E-21 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 Gene3D G3DSA:3.30.450.20 10 140 1.5E-23 T 14-10-2018 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SMART SM00283 297 544 3.3E-99 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SMART SM00086 204 246 17.0 T 14-10-2018 IPR001610 PAC motif Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SMART SM00086 83 124 7.2E-6 T 14-10-2018 IPR001610 PAC motif Atu3094 75ce35ede0c61d76de453d79565d6dec 594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 126 4.7E-17 T 14-10-2018 IPR000014 PAS domain Atu3094 75ce35ede0c61d76de453d79565d6dec 594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 251 3.4E-13 T 14-10-2018 IPR000014 PAS domain Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SUPERFAMILY SSF55785 142 243 6.28E-22 T 14-10-2018 IPR035965 PAS domain superfamily Atu3094 75ce35ede0c61d76de453d79565d6dec 594 Gene3D G3DSA:3.30.450.20 141 244 5.6E-18 T 14-10-2018 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SUPERFAMILY SSF55785 20 125 2.44E-24 T 14-10-2018 IPR035965 PAS domain superfamily Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SUPERFAMILY SSF58104 264 545 1.7E-66 T 14-10-2018 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 Gene3D G3DSA:1.10.287.950 246 546 1.4E-76 T 14-10-2018 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 Pfam PF08448 PAS fold 20 125 4.8E-13 T 14-10-2018 IPR013656 PAS fold-4 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 3.4E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 3.4E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 3.4E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 347 3.4E-40 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SMART SM00091 124 199 14.0 T 14-10-2018 IPR000014 PAS domain Atu3094 75ce35ede0c61d76de453d79565d6dec 594 SMART SM00091 10 78 2.1 T 14-10-2018 IPR000014 PAS domain Atu3094 75ce35ede0c61d76de453d79565d6dec 594 Pfam PF08447 PAS fold 154 239 6.0E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu3094 75ce35ede0c61d76de453d79565d6dec 594 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 510 2.3E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 Gene3D G3DSA:1.10.287.950 295 593 2.4E-79 T 14-10-2018 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 Pfam PF00672 HAMP domain 211 259 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 Gene3D G3DSA:3.30.450.20 32 189 2.2E-59 T 14-10-2018 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 SUPERFAMILY SSF58104 323 592 3.53E-68 T 14-10-2018 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 SUPERFAMILY SSF158472 211 260 2.62E-8 T 14-10-2018 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 SMART SM00304 292 343 0.089 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 SMART SM00304 211 264 3.2E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 SMART SM00283 344 591 6.6E-105 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 471 500 1.3E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 394 1.3E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 519 548 1.3E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 469 1.3E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 SMART SM01049 33 128 3.5E-45 T 14-10-2018 IPR033480 Single Cache domain 2 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 Pfam PF17200 Single Cache domain 2 37 185 4.0E-46 T 14-10-2018 IPR033480 Single Cache domain 2 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 Gene3D G3DSA:1.20.1480.50 193 269 3.3E-13 T 14-10-2018 Atu1912 89ad4b86e0cf3058cbc604fb54306208 604 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 404 559 4.1E-52 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu4191 52458bc30ac152e983656a54384fbdac 243 SUPERFAMILY SSF46785 12 83 2.8E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4191 52458bc30ac152e983656a54384fbdac 243 Gene3D G3DSA:1.20.120.530 102 235 1.1E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4191 52458bc30ac152e983656a54384fbdac 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4191 52458bc30ac152e983656a54384fbdac 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4191 52458bc30ac152e983656a54384fbdac 243 SMART SM00345 20 79 5.6E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4191 52458bc30ac152e983656a54384fbdac 243 SMART SM00895 101 228 2.0E-19 T 14-10-2018 IPR011711 GntR, C-terminal Atu4191 52458bc30ac152e983656a54384fbdac 243 Pfam PF07729 FCD domain 102 226 5.3E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu4191 52458bc30ac152e983656a54384fbdac 243 SUPERFAMILY SSF48008 98 235 1.96E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4191 52458bc30ac152e983656a54384fbdac 243 Gene3D G3DSA:1.10.10.10 11 84 6.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4191 52458bc30ac152e983656a54384fbdac 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 2.8E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2807 044cca75bcc098424e9bde0238b58ef7 205 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 34 205 6.0E-61 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Atu2807 044cca75bcc098424e9bde0238b58ef7 205 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 34 205 1.8E-68 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Atu2807 044cca75bcc098424e9bde0238b58ef7 205 SUPERFAMILY SSF52540 14 205 6.14E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2807 044cca75bcc098424e9bde0238b58ef7 205 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 7 28 1.1E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 Atu2807 044cca75bcc098424e9bde0238b58ef7 205 Gene3D G3DSA:3.40.50.300 13 205 4.8E-66 T 14-10-2018 Atu2807 044cca75bcc098424e9bde0238b58ef7 205 PIRSF PIRSF015617 8 205 7.2E-70 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Atu4207 fa74e4a46e66dd7811f3a9f3418ccff7 382 Gene3D G3DSA:3.30.420.40 189 372 1.0E-23 T 14-10-2018 Atu4207 fa74e4a46e66dd7811f3a9f3418ccff7 382 Gene3D G3DSA:3.30.420.40 75 188 2.0E-8 T 14-10-2018 Atu4207 fa74e4a46e66dd7811f3a9f3418ccff7 382 SUPERFAMILY SSF46785 9 74 4.53E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4207 fa74e4a46e66dd7811f3a9f3418ccff7 382 Gene3D G3DSA:1.10.10.10 11 74 1.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4207 fa74e4a46e66dd7811f3a9f3418ccff7 382 SUPERFAMILY SSF53067 79 369 2.98E-34 T 14-10-2018 Atu4207 fa74e4a46e66dd7811f3a9f3418ccff7 382 Pfam PF00480 ROK family 113 367 6.4E-24 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 Pfam PF07690 Major Facilitator Superfamily 11 352 6.4E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 PRINTS PR01035 Tetracycline resistance protein signature 46 65 8.0E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 PRINTS PR01035 Tetracycline resistance protein signature 16 32 8.0E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 PRINTS PR01035 Tetracycline resistance protein signature 131 153 8.0E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 PRINTS PR01035 Tetracycline resistance protein signature 272 293 8.0E-8 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 SUPERFAMILY SSF103473 5 385 3.27E-54 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 384 3.7E-66 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Atu2666 6fabcee790a8859ebecf68d8de4be80c 392 Gene3D G3DSA:1.20.1720.10 7 383 4.8E-85 T 14-10-2018 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Gene3D G3DSA:3.30.70.240 608 678 1.5E-88 T 14-10-2018 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Gene3D G3DSA:3.40.50.300 1 291 1.0E-112 T 14-10-2018 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Gene3D G3DSA:2.40.30.10 292 404 9.5E-44 T 14-10-2018 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 185 1.4E-36 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 286 3.0E-67 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SUPERFAMILY SSF52540 5 286 5.18E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Pfam PF03144 Elongation factor Tu domain 2 328 395 4.3E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Pfam PF14492 Elongation Factor G, domain II 408 481 1.6E-34 T 14-10-2018 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SUPERFAMILY SSF54980 408 485 7.55E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Pfam PF00679 Elongation factor G C-terminus 604 690 2.6E-30 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SMART SM00838 604 691 1.1E-51 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SUPERFAMILY SSF50447 269 408 7.3E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Gene3D G3DSA:3.30.230.10 488 691 1.5E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Pfam PF03764 Elongation factor G, domain IV 483 601 9.7E-46 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Gene3D G3DSA:3.30.70.870 409 487 3.7E-32 T 14-10-2018 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 694 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SMART SM00889 484 602 1.9E-68 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 695 111.461 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 PRINTS PR00315 GTP-binding elongation factor signature 135 144 4.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 PRINTS PR00315 GTP-binding elongation factor signature 99 110 4.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 PRINTS PR00315 GTP-binding elongation factor signature 83 93 4.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SUPERFAMILY SSF54211 483 602 1.14E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu1949 dcf93e34c10e0d479343ad7c6a2bbcae 699 SUPERFAMILY SSF54980 607 693 3.84E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 8 161 32.602 T 14-10-2018 IPR033747 Class I PurE Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 8 159 9.7E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 Gene3D G3DSA:3.40.50.7700 1 165 8.3E-71 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 SUPERFAMILY SSF52255 7 162 9.42E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 SMART SM01001 6 157 7.7E-102 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 PIRSF PIRSF001338 3 165 1.4E-65 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Atu3754 cf54a5433a6348bbd61eca35d8b34767 166 Pfam PF00731 AIR carboxylase 8 154 1.6E-63 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 SMART SM00345 16 75 1.8E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 Pfam PF07729 FCD domain 99 222 9.0E-23 T 14-10-2018 IPR011711 GntR, C-terminal Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 SUPERFAMILY SSF46785 9 79 1.86E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 Gene3D G3DSA:1.10.10.10 7 78 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 SUPERFAMILY SSF48008 94 231 3.92E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 4.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 4.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 SMART SM00895 97 223 4.1E-17 T 14-10-2018 IPR011711 GntR, C-terminal Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 Gene3D G3DSA:1.20.120.530 91 234 8.8E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5075 8d59a5ea75edcbe8530bfc14ba96cc37 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 3.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0938 a5ea6dbacd0b213d7bc9adf252c75f74 125 SMART SM00422 1 55 1.1E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0938 a5ea6dbacd0b213d7bc9adf252c75f74 125 Pfam PF09278 MerR, DNA binding 29 93 1.7E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding Atu0938 a5ea6dbacd0b213d7bc9adf252c75f74 125 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 111 5.8E-46 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 Atu0938 a5ea6dbacd0b213d7bc9adf252c75f74 125 Gene3D G3DSA:1.10.1660.10 1 110 7.4E-30 T 14-10-2018 Atu0938 a5ea6dbacd0b213d7bc9adf252c75f74 125 Pfam PF00376 MerR family regulatory protein 1 24 3.8E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0938 a5ea6dbacd0b213d7bc9adf252c75f74 125 SUPERFAMILY SSF46955 1 111 1.28E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 33.348 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 SUPERFAMILY SSF54534 81 156 1.16E-23 T 14-10-2018 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 155 2.5E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 155 3.1E-61 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 SUPERFAMILY SSF46557 4 79 2.22E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 Gene3D G3DSA:3.10.50.30 77 157 3.4E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 1.2E-29 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 PIRSF PIRSF006092 1 157 1.1E-54 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Atu2182 8e9f36e977596d8d454a22dc8add77f1 158 Gene3D G3DSA:1.10.287.180 2 76 8.1E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Atu2449 c3a60711abb036246cdf0b99b6b4617b 177 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 68 167 7.2E-17 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Atu2449 c3a60711abb036246cdf0b99b6b4617b 177 Gene3D G3DSA:3.10.620.30 60 177 3.9E-8 T 14-10-2018 Atu0597 2280fde0f299587b8ed2f410ba4647f6 453 Gene3D G3DSA:3.90.780.10 310 402 7.3E-6 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu0597 2280fde0f299587b8ed2f410ba4647f6 453 SUPERFAMILY SSF56300 30 298 2.99E-27 T 14-10-2018 Atu0597 2280fde0f299587b8ed2f410ba4647f6 453 Gene3D G3DSA:3.60.21.10 31 303 2.5E-21 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu0597 2280fde0f299587b8ed2f410ba4647f6 453 SUPERFAMILY SSF55816 306 429 3.92E-10 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu0597 2280fde0f299587b8ed2f410ba4647f6 453 Pfam PF02872 5'-nucleotidase, C-terminal domain 318 387 6.4E-8 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3915 a4860b2c073489959c49589eb9be315f 151 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 10 148 3.4E-64 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 Atu3915 a4860b2c073489959c49589eb9be315f 151 Pfam PF00376 MerR family regulatory protein 11 47 7.0E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3915 a4860b2c073489959c49589eb9be315f 151 Pfam PF09278 MerR, DNA binding 52 117 5.1E-13 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding Atu3915 a4860b2c073489959c49589eb9be315f 151 SMART SM00422 10 78 4.5E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3915 a4860b2c073489959c49589eb9be315f 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 1.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3915 a4860b2c073489959c49589eb9be315f 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 1.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3915 a4860b2c073489959c49589eb9be315f 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 1.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3915 a4860b2c073489959c49589eb9be315f 151 Gene3D G3DSA:1.10.1660.10 3 133 7.8E-30 T 14-10-2018 Atu3915 a4860b2c073489959c49589eb9be315f 151 SUPERFAMILY SSF46955 10 132 3.41E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu3915 a4860b2c073489959c49589eb9be315f 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1179 6c7ed0afb54bf147e526ac26ebda5c30 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 323 9.4E-37 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atu1179 6c7ed0afb54bf147e526ac26ebda5c30 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 323 71.252 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atu1179 6c7ed0afb54bf147e526ac26ebda5c30 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 190 1.3E-33 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atu1179 6c7ed0afb54bf147e526ac26ebda5c30 323 SUPERFAMILY SSF53901 8 323 9.57E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1179 6c7ed0afb54bf147e526ac26ebda5c30 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 323 2.0E-121 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atu1179 6c7ed0afb54bf147e526ac26ebda5c30 323 Gene3D G3DSA:3.40.47.10 2 323 1.3E-127 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4000 99e2a0bcc315631585e3d54dbb2d0801 430 Gene3D G3DSA:3.90.1150.10 6 408 1.8E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu4000 99e2a0bcc315631585e3d54dbb2d0801 430 Gene3D G3DSA:3.40.640.10 54 317 1.8E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu4000 99e2a0bcc315631585e3d54dbb2d0801 430 Pfam PF00202 Aminotransferase class-III 22 412 2.7E-102 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu4000 99e2a0bcc315631585e3d54dbb2d0801 430 SUPERFAMILY SSF53383 5 413 1.6E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4000 99e2a0bcc315631585e3d54dbb2d0801 430 PIRSF PIRSF000521 22 362 9.0E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu4000 99e2a0bcc315631585e3d54dbb2d0801 430 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 6 413 4.1E-152 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 712 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 693 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 679 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 736 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SMART SM00304 325 378 5.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SUPERFAMILY SSF55785 381 498 1.69E-9 T 14-10-2018 IPR035965 PAS domain superfamily Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Pfam PF00512 His Kinase A (phospho-acceptor) domain 510 577 1.9E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SMART SM00091 392 457 0.0029 T 14-10-2018 IPR000014 PAS domain Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 PIRSF PIRSF037532 7 742 1.2E-239 T 14-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SMART SM00387 620 739 3.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SUPERFAMILY SSF158472 326 375 4.84E-8 T 14-10-2018 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Pfam PF08448 PAS fold 402 500 1.0E-6 T 14-10-2018 IPR013656 PAS fold-4 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Gene3D G3DSA:3.30.565.10 581 744 1.9E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Gene3D G3DSA:3.30.450.20 383 498 1.4E-10 T 14-10-2018 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SUPERFAMILY SSF47384 503 578 6.28E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SUPERFAMILY SSF55874 579 737 8.91E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Gene3D G3DSA:1.10.287.130 512 576 3.3E-9 T 14-10-2018 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 621 736 4.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Gene3D G3DSA:1.20.1480.50 288 382 2.2E-11 T 14-10-2018 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 Pfam PF00672 HAMP domain 326 374 1.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 505 8.4E-7 T 14-10-2018 IPR000014 PAS domain Atu1447 8bb0b7125b7a89925b6a4c4fcd232d69 753 SMART SM00388 508 580 7.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0520 3099d88d6093c9e51789129c04ed3483 129 SUPERFAMILY SSF52172 5 126 1.07E-34 T 14-10-2018 IPR011006 CheY-like superfamily Atu0520 3099d88d6093c9e51789129c04ed3483 129 SMART SM00448 7 121 2.9E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0520 3099d88d6093c9e51789129c04ed3483 129 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-35 T 14-10-2018 Atu0520 3099d88d6093c9e51789129c04ed3483 129 Pfam PF00072 Response regulator receiver domain 9 122 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1738 4d32cff0b316e31d56c87caa768b3083 577 SUPERFAMILY SSF90123 3 321 6.28E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu1738 4d32cff0b316e31d56c87caa768b3083 577 SMART SM00382 358 544 2.6E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1738 4d32cff0b316e31d56c87caa768b3083 577 SUPERFAMILY SSF52540 323 569 1.49E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1738 4d32cff0b316e31d56c87caa768b3083 577 Gene3D G3DSA:3.40.50.300 329 572 7.3E-93 T 14-10-2018 Atu1738 4d32cff0b316e31d56c87caa768b3083 577 Gene3D G3DSA:1.20.1560.10 1 315 3.0E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu1738 4d32cff0b316e31d56c87caa768b3083 577 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1738 4d32cff0b316e31d56c87caa768b3083 577 Pfam PF00664 ABC transporter transmembrane region 17 287 1.1E-52 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu1738 4d32cff0b316e31d56c87caa768b3083 577 Pfam PF00005 ABC transporter 349 498 1.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 Gene3D G3DSA:3.30.9.10 73 387 2.6E-165 T 14-10-2018 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 Gene3D G3DSA:3.50.50.60 2 351 2.6E-165 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.5E-27 T 14-10-2018 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.5E-27 T 14-10-2018 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.5E-27 T 14-10-2018 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.5E-27 T 14-10-2018 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 4.6E-208 T 14-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 SUPERFAMILY SSF51905 1 389 1.35E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 SUPERFAMILY SSF54373 175 275 5.1E-46 T 14-10-2018 Atu4544 c7a8d3bb17b61d7b5010a09d25363587 390 Pfam PF01494 FAD binding domain 2 343 1.2E-89 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Gene3D G3DSA:3.40.50.300 376 533 1.3E-65 T 14-10-2018 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Gene3D G3DSA:2.30.30.940 616 720 1.3E-65 T 14-10-2018 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Gene3D G3DSA:3.30.930.30 2 208 9.0E-66 T 14-10-2018 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Pfam PF01443 Viral (Superfamily 1) RNA helicase 719 763 2.2E-4 T 14-10-2018 IPR027351 (+) RNA virus helicase core domain GO:0005524 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 SUPERFAMILY SSF52540 495 770 6.11E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Pfam PF03389 MobA/MobL family 17 229 8.2E-65 T 14-10-2018 IPR005053 MobA/MobL protein Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Pfam PF13604 AAA domain 382 569 9.4E-60 T 14-10-2018 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 TIGRFAM TIGR02768 TraA_Ti: Ti-type conjugative transfer relaxase TraA 1 777 0.0 T 14-10-2018 IPR014136 Ti-type conjugative transfer relaxase TraA Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 Gene3D G3DSA:3.40.50.300 534 772 1.3E-65 T 14-10-2018 Atu4855 e88ac5b372289278fd5f3e9539fc231e 1266 SUPERFAMILY SSF52540 378 526 1.51E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 Gene3D G3DSA:3.40.50.720 128 274 7.3E-107 T 14-10-2018 Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 338 3.0E-168 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 SMART SM00829 15 335 1.8E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 Pfam PF13602 Zinc-binding dehydrogenase 194 335 6.8E-19 T 14-10-2018 Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 SUPERFAMILY SSF50129 17 143 8.52E-31 T 14-10-2018 IPR011032 GroES-like superfamily Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 SUPERFAMILY SSF51735 117 288 9.49E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 93 1.3E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu0996 8c46c3824a500d4c5a74d2ab40036b0a 338 Gene3D G3DSA:3.90.180.10 23 335 7.3E-107 T 14-10-2018 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Hamap MF_01961 Catalase-peroxidase [katG]. 6 723 38.193 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Gene3D G3DSA:1.10.520.10 432 722 5.0E-144 T 14-10-2018 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Gene3D G3DSA:1.10.420.20 190 398 9.0E-209 T 14-10-2018 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Pfam PF00141 Peroxidase 405 697 5.5E-34 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Pfam PF00141 Peroxidase 68 396 4.9E-46 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 10 722 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Gene3D G3DSA:1.10.420.10 577 698 5.0E-144 T 14-10-2018 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 Gene3D G3DSA:1.10.520.10 19 431 9.0E-209 T 14-10-2018 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 4.5E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 266 289 4.5E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 4.5E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 477 503 4.5E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 4.5E-48 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00458 Haem peroxidase superfamily signature 317 332 8.0E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 8.0E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 8.0E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 8.0E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 PRINTS PR00458 Haem peroxidase superfamily signature 258 273 8.0E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 SUPERFAMILY SSF48113 17 430 1.22E-138 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu4642 98a5000ccbb1c5b2d945c4a403eef451 723 SUPERFAMILY SSF48113 431 721 8.69E-108 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Atu3473 448c25bbd7e5a05e2ea2307c450ab3d6 412 SUPERFAMILY SSF52518 8 408 2.53E-94 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu3473 448c25bbd7e5a05e2ea2307c450ab3d6 412 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 7 47 7.4E-20 T 14-10-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 Atu3473 448c25bbd7e5a05e2ea2307c450ab3d6 412 Pfam PF00676 Dehydrogenase E1 component 86 380 9.6E-90 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Atu3473 448c25bbd7e5a05e2ea2307c450ab3d6 412 Gene3D G3DSA:3.40.50.970 5 410 9.5E-126 T 14-10-2018 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 Gene3D G3DSA:1.10.1050.10 7 205 8.9E-68 T 14-10-2018 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 SUPERFAMILY SSF55174 6 205 5.36E-60 T 14-10-2018 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 Gene3D G3DSA:3.10.290.10 93 188 8.9E-68 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 SMART SM00363 94 158 2.0E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 31.773 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 205 3.4E-69 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 SMART SM01390 3 93 7.9E-37 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 93 3.6E-24 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Atu1860 c9202c289ffca5bbe21f862ff5724b00 205 Pfam PF01479 S4 domain 95 141 1.0E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1201 59ac070e289d1782a52f398bc01f0e45 337 SUPERFAMILY SSF52540 24 267 5.44E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1201 59ac070e289d1782a52f398bc01f0e45 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 245 331 1.9E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu1201 59ac070e289d1782a52f398bc01f0e45 337 Gene3D G3DSA:3.40.50.300 22 336 3.1E-96 T 14-10-2018 Atu1201 59ac070e289d1782a52f398bc01f0e45 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 312 1.0E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu1201 59ac070e289d1782a52f398bc01f0e45 337 SMART SM00382 53 254 2.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1201 59ac070e289d1782a52f398bc01f0e45 337 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1201 59ac070e289d1782a52f398bc01f0e45 337 Pfam PF00005 ABC transporter 45 196 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 PRINTS PR00160 Glutaredoxin signature 20 38 5.9E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 PRINTS PR00160 Glutaredoxin signature 62 75 5.9E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 PRINTS PR00160 Glutaredoxin signature 76 89 5.9E-15 T 14-10-2018 IPR014025 Glutaredoxin subgroup Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 Gene3D G3DSA:3.40.30.10 14 100 1.5E-28 T 14-10-2018 Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 SUPERFAMILY SSF52833 11 99 2.05E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 20 98 2.2E-34 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Atu3511 565157a1c02b23d5ee3a3e8d138cf398 100 Pfam PF00462 Glutaredoxin 20 79 2.4E-22 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atu3951 a791365fd0b3b432f61e9484e145a711 304 SUPERFAMILY SSF46785 2 112 3.13E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3951 a791365fd0b3b432f61e9484e145a711 304 Gene3D G3DSA:3.40.190.290 91 294 3.5E-56 T 14-10-2018 Atu3951 a791365fd0b3b432f61e9484e145a711 304 Pfam PF03466 LysR substrate binding domain 88 294 5.1E-35 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3951 a791365fd0b3b432f61e9484e145a711 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3951 a791365fd0b3b432f61e9484e145a711 304 Gene3D G3DSA:1.10.10.10 2 89 3.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3951 a791365fd0b3b432f61e9484e145a711 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3951 a791365fd0b3b432f61e9484e145a711 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3951 a791365fd0b3b432f61e9484e145a711 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3951 a791365fd0b3b432f61e9484e145a711 304 SUPERFAMILY SSF53850 90 299 5.07E-37 T 14-10-2018 Atu4112 a75322c68345acee2bd19a79a5b3295f 395 SUPERFAMILY SSF55920 160 385 4.97E-64 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu4112 a75322c68345acee2bd19a79a5b3295f 395 Gene3D G3DSA:3.90.230.10 159 388 5.1E-67 T 14-10-2018 Atu4112 a75322c68345acee2bd19a79a5b3295f 395 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 319 331 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Atu4112 a75322c68345acee2bd19a79a5b3295f 395 Pfam PF01321 Creatinase/Prolidase N-terminal domain 27 160 6.7E-9 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Atu4112 a75322c68345acee2bd19a79a5b3295f 395 Gene3D G3DSA:3.40.350.10 3 158 1.9E-29 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu4112 a75322c68345acee2bd19a79a5b3295f 395 PRINTS PR00599 Methionine aminopeptidase-1 signature 238 254 2.6E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu4112 a75322c68345acee2bd19a79a5b3295f 395 PRINTS PR00599 Methionine aminopeptidase-1 signature 341 353 2.6E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu4112 a75322c68345acee2bd19a79a5b3295f 395 SUPERFAMILY SSF53092 4 158 1.36E-19 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu4112 a75322c68345acee2bd19a79a5b3295f 395 Pfam PF00557 Metallopeptidase family M24 168 373 1.7E-48 T 14-10-2018 IPR000994 Peptidase M24 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 Pfam PF00664 ABC transporter transmembrane region 25 284 2.9E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 SUPERFAMILY SSF90123 12 320 3.53E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 Gene3D G3DSA:3.40.50.300 331 565 1.2E-66 T 14-10-2018 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 Gene3D G3DSA:1.20.1560.10 9 320 4.5E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 21 561 5.8E-213 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 SUPERFAMILY SSF52540 331 559 9.73E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 Pfam PF00005 ABC transporter 351 499 1.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4413 dd7b239af1bf06abf7cc711a43a1922e 583 SMART SM00382 360 547 2.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0189 0d0183150fad162a4a275a215f6f3ea4 381 Gene3D G3DSA:1.10.3720.10 166 377 4.7E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu0189 0d0183150fad162a4a275a215f6f3ea4 381 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 62 6.4E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu0189 0d0183150fad162a4a275a215f6f3ea4 381 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 197 378 6.1E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0189 0d0183150fad162a4a275a215f6f3ea4 381 SUPERFAMILY SSF161098 174 360 6.93E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu4590 ef6f3e8275f48f8b1b28799a804b8d6a 348 Gene3D G3DSA:3.20.20.100 1 343 1.4E-138 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu4590 ef6f3e8275f48f8b1b28799a804b8d6a 348 Pfam PF00248 Aldo/keto reductase family 16 319 2.4E-70 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4590 ef6f3e8275f48f8b1b28799a804b8d6a 348 SUPERFAMILY SSF51430 1 319 1.96E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu4590 ef6f3e8275f48f8b1b28799a804b8d6a 348 PRINTS PR00069 Aldo-keto reductase signature 112 130 1.2E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4590 ef6f3e8275f48f8b1b28799a804b8d6a 348 PRINTS PR00069 Aldo-keto reductase signature 48 72 1.2E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4590 ef6f3e8275f48f8b1b28799a804b8d6a 348 PRINTS PR00069 Aldo-keto reductase signature 143 160 1.2E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 Pfam PF13437 HlyD family secretion protein 286 387 9.6E-19 T 14-10-2018 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 ProSitePatterns PS00543 HlyD family secretion proteins signature. 398 420 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 Gene3D G3DSA:2.40.50.100 56 122 1.1E-8 T 14-10-2018 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 Gene3D G3DSA:2.40.30.170 299 416 6.3E-13 T 14-10-2018 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 SUPERFAMILY SSF111369 55 112 9.55E-5 T 14-10-2018 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 Pfam PF13533 Biotin-lipoyl like 56 95 1.5E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 298 319 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 331 355 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 398 413 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 355 378 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 433 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 7.7E-55 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4414 2bfa889dc07b02b1ae5171cc1c1ea487 434 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 23 432 2.3E-117 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 169 6.1E-35 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Gene3D G3DSA:3.10.129.10 326 461 4.0E-35 T 14-10-2018 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 1 308 56.382 T 14-10-2018 IPR026578 L-carnitine dehydrogenase MetaCyc: PWY-3602|MetaCyc: PWY-7472 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Pfam PF13279 Thioesterase-like superfamily 339 454 1.8E-17 T 14-10-2018 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 SUPERFAMILY SSF54637 333 471 5.03E-38 T 14-10-2018 IPR029069 HotDog domain superfamily Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 SUPERFAMILY SSF48179 178 254 2.21E-11 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Gene3D G3DSA:1.10.1040.10 178 302 6.3E-25 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Gene3D G3DSA:3.40.50.720 1 177 1.1E-41 T 14-10-2018 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 179 245 4.4E-12 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu5344 8fd407965b0085c89e1eca38be56b6ae 484 SUPERFAMILY SSF51735 2 172 3.29E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 Pfam PF03466 LysR substrate binding domain 88 293 2.5E-29 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 Gene3D G3DSA:1.10.10.10 1 91 4.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 SUPERFAMILY SSF53850 87 297 9.05E-33 T 14-10-2018 Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 Gene3D G3DSA:3.40.190.10 92 290 4.2E-46 T 14-10-2018 Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 Gene3D G3DSA:3.40.190.10 163 266 4.2E-46 T 14-10-2018 Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 SUPERFAMILY SSF46785 7 110 3.05E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5195 2f7f94d4c0e0d3dfe3254472809e2220 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4510 e5970cbf8d5e2dfc07b05c9dd612226f 302 SUPERFAMILY SSF51658 4 282 9.81E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4510 e5970cbf8d5e2dfc07b05c9dd612226f 302 Gene3D G3DSA:3.20.20.150 1 289 1.8E-74 T 14-10-2018 Atu4510 e5970cbf8d5e2dfc07b05c9dd612226f 302 Pfam PF01261 Xylose isomerase-like TIM barrel 29 240 3.9E-21 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4510 e5970cbf8d5e2dfc07b05c9dd612226f 302 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 2 289 2.2E-111 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 Atu3744 db96533ca7665f320cf2754da44a40fb 599 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 588 3.1E-262 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein Atu3744 db96533ca7665f320cf2754da44a40fb 599 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3744 db96533ca7665f320cf2754da44a40fb 599 Pfam PF00005 ABC transporter 369 517 7.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3744 db96533ca7665f320cf2754da44a40fb 599 Gene3D G3DSA:1.20.1560.10 14 336 1.7E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3744 db96533ca7665f320cf2754da44a40fb 599 SMART SM00382 377 563 6.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3744 db96533ca7665f320cf2754da44a40fb 599 Gene3D G3DSA:3.40.50.300 344 595 2.8E-94 T 14-10-2018 Atu3744 db96533ca7665f320cf2754da44a40fb 599 SUPERFAMILY SSF90123 21 339 2.62E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3744 db96533ca7665f320cf2754da44a40fb 599 SUPERFAMILY SSF52540 342 588 3.62E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3744 db96533ca7665f320cf2754da44a40fb 599 Pfam PF00664 ABC transporter transmembrane region 33 297 1.1E-47 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu0285 6a54ca23c3377d3efa772a1719e15b29 364 SUPERFAMILY SSF50969 60 345 1.65E-16 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Atu0285 6a54ca23c3377d3efa772a1719e15b29 364 PIRSF PIRSF028101 1 363 1.2E-159 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Atu0285 6a54ca23c3377d3efa772a1719e15b29 364 Pfam PF07433 Protein of unknown function (DUF1513) 69 361 1.1E-106 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Atu0285 6a54ca23c3377d3efa772a1719e15b29 364 Gene3D G3DSA:2.130.10.10 49 274 6.3E-7 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 Gene3D G3DSA:3.40.50.300 8 277 1.9E-50 T 14-10-2018 Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 Gene3D G3DSA:3.40.50.300 278 480 3.2E-23 T 14-10-2018 Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 SMART SM00382 283 460 1.2 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 SMART SM00382 35 226 2.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 Pfam PF00005 ABC transporter 26 178 5.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 SUPERFAMILY SSF52540 276 473 1.52E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 SUPERFAMILY SSF52540 11 238 4.41E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4032 9ac5edd6513e9feb8de61c175398b0c7 487 ProSitePatterns PS00211 ABC transporters family signature. 386 400 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1375 7a8705b236a90608d2a104c806e3de06 308 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 Hamap MF_00050 Elongation factor Ts [tsf]. 1 306 78.622 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 SUPERFAMILY SSF54713 57 146 1.44E-20 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 307 4.7E-92 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 Gene3D G3DSA:1.10.8.10 1 56 4.9E-28 T 14-10-2018 Atu1375 7a8705b236a90608d2a104c806e3de06 308 SUPERFAMILY SSF46934 4 55 3.48E-20 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 Atu1375 7a8705b236a90608d2a104c806e3de06 308 Gene3D G3DSA:3.30.479.20 58 161 1.4E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 Gene3D G3DSA:1.10.286.20 207 246 1.5E-18 T 14-10-2018 Atu1375 7a8705b236a90608d2a104c806e3de06 308 SUPERFAMILY SSF54713 150 307 8.37E-46 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Atu1375 7a8705b236a90608d2a104c806e3de06 308 Pfam PF00889 Elongation factor TS 71 289 7.1E-68 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Atu3773 502464bb2efab85a4b33594f0261fd46 154 Gene3D G3DSA:2.40.50.140 96 151 9.0E-7 T 14-10-2018 Atu3773 502464bb2efab85a4b33594f0261fd46 154 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 152 1.3E-37 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 SUPERFAMILY SSF46785 97 168 3.46E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 SMART SM00866 185 322 2.2E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 100 326 6.8E-100 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 SUPERFAMILY SSF64288 152 325 2.67E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 Pfam PF07702 UTRA domain 186 322 4.1E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 Gene3D G3DSA:3.40.1410.10 183 318 9.0E-30 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 Pfam PF00392 Bacterial regulatory proteins, gntR family 101 164 7.8E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 SMART SM00345 105 164 1.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 Gene3D G3DSA:1.10.10.10 99 168 3.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 138 154 2.4E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3799 9046136bb0bcd66dcd2d860c455fa981 327 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 124 138 2.4E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3362 53b1434c6429609c0095bba2e5d9fe27 436 Pfam PF00296 Luciferase-like monooxygenase 21 382 2.4E-64 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3362 53b1434c6429609c0095bba2e5d9fe27 436 PIRSF PIRSF000337 6 436 3.3E-161 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3362 53b1434c6429609c0095bba2e5d9fe27 436 Gene3D G3DSA:3.20.20.30 2 436 1.6E-158 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3362 53b1434c6429609c0095bba2e5d9fe27 436 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 12 426 4.2E-173 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3362 53b1434c6429609c0095bba2e5d9fe27 436 SUPERFAMILY SSF51679 7 432 1.96E-132 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SMART SM00065 133 311 0.0014 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SUPERFAMILY SSF55874 565 731 1.31E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Pfam PF00360 Phytochrome region 314 493 9.5E-55 T 14-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SUPERFAMILY SSF55781 310 495 1.47E-50 T 14-10-2018 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Pfam PF01590 GAF domain 134 300 3.1E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Pfam PF08446 PAS fold 11 107 5.5E-11 T 14-10-2018 IPR013654 PAS fold-2 GO:0006355 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Gene3D G3DSA:3.30.450.40 11 465 1.5E-191 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 PRINTS PR01033 Phytochrome signature 235 256 1.3E-14 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 PRINTS PR01033 Phytochrome signature 148 167 1.3E-14 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 PRINTS PR01033 Phytochrome signature 452 470 1.3E-14 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 PRINTS PR01033 Phytochrome signature 336 356 1.3E-14 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 PRINTS PR01033 Phytochrome signature 421 440 1.3E-14 T 14-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Gene3D G3DSA:3.30.565.10 578 735 8.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SMART SM00387 617 729 3.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Pfam PF00512 His Kinase A (phospho-acceptor) domain 511 574 9.4E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Gene3D G3DSA:1.10.287.130 487 574 1.1E-16 T 14-10-2018 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SUPERFAMILY SSF47384 495 575 1.29E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Gene3D G3DSA:3.30.450.20 15 238 1.5E-191 T 14-10-2018 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 728 1.5E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SUPERFAMILY SSF55781 118 298 3.92E-54 T 14-10-2018 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 Gene3D G3DSA:3.30.450.270 307 485 1.5E-191 T 14-10-2018 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SMART SM00388 509 576 2.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1990 0e2d301ac088ca05cc25d6b271d6efa8 736 SUPERFAMILY SSF55785 4 107 5.76E-21 T 14-10-2018 IPR035965 PAS domain superfamily Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 SUPERFAMILY SSF55200 56 139 7.06E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 48 3.8E-19 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 Gene3D G3DSA:3.10.20.80 1 47 1.5E-20 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 Gene3D G3DSA:3.30.110.10 48 140 6.3E-38 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 4 140 1.1E-57 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 55 139 3.1E-38 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Atu0254 aeb8686d5a3442dfdce5a874f6c54ed9 140 SUPERFAMILY SSF54364 1 50 4.32E-18 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Atu1088 532027cd1664382f004434ab905a88e4 191 SUPERFAMILY SSF55653 57 146 3.27E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Atu1088 532027cd1664382f004434ab905a88e4 191 Gene3D G3DSA:3.40.5.10 1 50 1.7E-20 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1088 532027cd1664382f004434ab905a88e4 191 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1088 532027cd1664382f004434ab905a88e4 191 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 6.5E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1088 532027cd1664382f004434ab905a88e4 191 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 4.2E-36 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1088 532027cd1664382f004434ab905a88e4 191 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 7.4E-22 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal Atu1088 532027cd1664382f004434ab905a88e4 191 SUPERFAMILY SSF55658 1 57 6.63E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Atu1088 532027cd1664382f004434ab905a88e4 191 Gene3D G3DSA:3.10.430.100 60 147 4.4E-22 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Atu1088 532027cd1664382f004434ab905a88e4 191 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.705 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu2002 ba58971fca165a7f20c874fa1c8c7df1 322 SUPERFAMILY SSF53474 12 312 1.37E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2002 ba58971fca165a7f20c874fa1c8c7df1 322 Pfam PF00756 Putative esterase 30 308 9.2E-31 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Atu2002 ba58971fca165a7f20c874fa1c8c7df1 322 Gene3D G3DSA:3.40.50.1820 23 314 2.0E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1399 19fae9e2f7d01ee9e282043eedbe3b9a 267 Gene3D G3DSA:3.40.190.10 126 217 1.0E-53 T 14-10-2018 Atu1399 19fae9e2f7d01ee9e282043eedbe3b9a 267 SMART SM00062 39 260 1.0E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1399 19fae9e2f7d01ee9e282043eedbe3b9a 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 258 3.8E-52 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1399 19fae9e2f7d01ee9e282043eedbe3b9a 267 Gene3D G3DSA:3.40.190.10 29 262 1.0E-53 T 14-10-2018 Atu1399 19fae9e2f7d01ee9e282043eedbe3b9a 267 SUPERFAMILY SSF53850 36 262 1.02E-59 T 14-10-2018 Atu4618 90ab1c653a93f9c1dfc514a5bd0786e3 189 SUPERFAMILY SSF51182 6 186 2.22E-71 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4618 90ab1c653a93f9c1dfc514a5bd0786e3 189 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 176 1.1E-68 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atu4618 90ab1c653a93f9c1dfc514a5bd0786e3 189 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 9 178 8.5E-64 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atu4618 90ab1c653a93f9c1dfc514a5bd0786e3 189 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 2.0E-102 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atu4618 90ab1c653a93f9c1dfc514a5bd0786e3 189 Gene3D G3DSA:2.60.120.10 2 189 2.8E-70 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu2658 05dbaff0fa6ead6e5f1364924b66c09e 243 Gene3D G3DSA:3.40.50.880 13 228 3.5E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2658 05dbaff0fa6ead6e5f1364924b66c09e 243 SUPERFAMILY SSF52317 21 203 1.13E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2658 05dbaff0fa6ead6e5f1364924b66c09e 243 Pfam PF00117 Glutamine amidotransferase class-I 35 189 4.8E-15 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu5505 ffa9d98d64ce3540075f961fd2767921 221 Gene3D G3DSA:1.10.10.10 123 218 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5505 ffa9d98d64ce3540075f961fd2767921 221 SMART SM00862 145 216 2.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5505 ffa9d98d64ce3540075f961fd2767921 221 SUPERFAMILY SSF46894 119 216 5.67E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu5505 ffa9d98d64ce3540075f961fd2767921 221 SUPERFAMILY SSF52172 1 132 7.26E-37 T 14-10-2018 IPR011006 CheY-like superfamily Atu5505 ffa9d98d64ce3540075f961fd2767921 221 SMART SM00448 1 112 1.5E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5505 ffa9d98d64ce3540075f961fd2767921 221 Gene3D G3DSA:3.40.50.2300 1 121 2.0E-37 T 14-10-2018 Atu5505 ffa9d98d64ce3540075f961fd2767921 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 8.0E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5505 ffa9d98d64ce3540075f961fd2767921 221 Pfam PF00072 Response regulator receiver domain 3 112 7.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1202 744ed45790728fbf540906c87d66fa5d 497 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 71 92 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Atu1202 744ed45790728fbf540906c87d66fa5d 497 Gene3D G3DSA:3.40.190.10 57 480 8.0E-108 T 14-10-2018 Atu1202 744ed45790728fbf540906c87d66fa5d 497 PIRSF PIRSF002741 19 497 1.0E-87 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu1202 744ed45790728fbf540906c87d66fa5d 497 SUPERFAMILY SSF53850 41 491 2.99E-111 T 14-10-2018 Atu1202 744ed45790728fbf540906c87d66fa5d 497 Gene3D G3DSA:3.10.105.10 254 468 8.0E-108 T 14-10-2018 Atu1202 744ed45790728fbf540906c87d66fa5d 497 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 418 5.9E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu5480 24b0053f6ab5cae0f79a294715785348 254 Pfam PF00005 ABC transporter 30 178 1.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5480 24b0053f6ab5cae0f79a294715785348 254 Gene3D G3DSA:3.40.50.300 11 251 2.2E-70 T 14-10-2018 Atu5480 24b0053f6ab5cae0f79a294715785348 254 PIRSF PIRSF039085 11 254 8.1E-99 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu5480 24b0053f6ab5cae0f79a294715785348 254 SUPERFAMILY SSF52540 14 246 5.45E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5480 24b0053f6ab5cae0f79a294715785348 254 SMART SM00382 39 226 3.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5480 24b0053f6ab5cae0f79a294715785348 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0205 01be778cd318711252fbf53a25f92929 518 Gene3D G3DSA:3.40.605.10 37 479 4.8E-148 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu0205 01be778cd318711252fbf53a25f92929 518 SUPERFAMILY SSF53720 19 502 3.4E-146 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu0205 01be778cd318711252fbf53a25f92929 518 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu0205 01be778cd318711252fbf53a25f92929 518 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 25 502 8.6E-194 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Atu0205 01be778cd318711252fbf53a25f92929 518 Gene3D G3DSA:3.40.309.10 269 471 4.8E-148 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu0205 01be778cd318711252fbf53a25f92929 518 Pfam PF00171 Aldehyde dehydrogenase family 36 498 2.1E-132 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 416 434 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 584 600 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 230 250 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 367 384 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 602 619 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 268 285 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 438 451 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 297 318 3.6E-44 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 203 270 3.8E-7 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal Atu2596 986da81f0c9f96c46ea1409b34271d86 639 Gene3D G3DSA:3.20.20.80 273 636 2.4E-119 T 14-10-2018 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 274 620 4.3E-109 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 Gene3D G3DSA:3.30.379.10 143 272 8.7E-9 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Atu2596 986da81f0c9f96c46ea1409b34271d86 639 SUPERFAMILY SSF51445 274 629 9.33E-116 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu2596 986da81f0c9f96c46ea1409b34271d86 639 SUPERFAMILY SSF55545 145 273 5.58E-11 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 Atu3935 1565a73a3410ccf745c24e557d84988c 448 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 446 1.3E-180 T 14-10-2018 IPR010252 Formiminoglutamate deiminase Atu3935 1565a73a3410ccf745c24e557d84988c 448 SUPERFAMILY SSF51338 12 445 2.62E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3935 1565a73a3410ccf745c24e557d84988c 448 SUPERFAMILY SSF51556 49 370 2.72E-68 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3935 1565a73a3410ccf745c24e557d84988c 448 Gene3D G3DSA:3.20.20.140 51 438 5.2E-181 T 14-10-2018 Atu3935 1565a73a3410ccf745c24e557d84988c 448 Pfam PF01979 Amidohydrolase family 46 420 2.3E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu3935 1565a73a3410ccf745c24e557d84988c 448 Gene3D G3DSA:2.30.40.10 9 426 5.2E-181 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Gene3D G3DSA:3.30.300.30 906 1013 2.0E-28 T 14-10-2018 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 ProSitePatterns PS00455 Putative AMP-binding domain signature. 655 666 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Pfam PF00501 AMP-binding enzyme 522 912 1.2E-87 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 540 936 2.7E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Gene3D G3DSA:3.30.559.30 233 483 1.3E-115 T 14-10-2018 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Pfam PF00668 Condensation domain 53 500 2.8E-87 T 14-10-2018 IPR001242 Condensation domain Atu3670 75e877b7d78388ee21680049cdd302cd 1128 SUPERFAMILY SSF56801 480 1035 4.32E-136 T 14-10-2018 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 SUPERFAMILY SSF52777 235 488 1.04E-53 T 14-10-2018 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Pfam PF00550 Phosphopantetheine attachment site 1026 1089 2.9E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Pfam PF13193 AMP-binding enzyme C-terminal domain 920 997 4.0E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu3670 75e877b7d78388ee21680049cdd302cd 1128 SUPERFAMILY SSF47336 1018 1090 2.22E-19 T 14-10-2018 IPR036736 ACP-like superfamily Atu3670 75e877b7d78388ee21680049cdd302cd 1128 SMART SM00823 Phosphopantetheine attachment site 1024 1093 7.4E-8 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Gene3D G3DSA:1.10.1200.10 1014 1095 6.8E-23 T 14-10-2018 IPR036736 ACP-like superfamily Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Gene3D G3DSA:3.30.559.10 55 429 1.3E-115 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 Gene3D G3DSA:3.40.50.12780 508 905 3.9E-118 T 14-10-2018 Atu3670 75e877b7d78388ee21680049cdd302cd 1128 SUPERFAMILY SSF52777 50 249 1.45E-45 T 14-10-2018 Atu5419 b52f5cb8c8a32582c7705fe628f033af 326 Gene3D G3DSA:1.10.10.10 4 94 4.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5419 b52f5cb8c8a32582c7705fe628f033af 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5419 b52f5cb8c8a32582c7705fe628f033af 326 Pfam PF03466 LysR substrate binding domain 96 293 9.9E-27 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5419 b52f5cb8c8a32582c7705fe628f033af 326 SUPERFAMILY SSF46785 4 87 7.26E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5419 b52f5cb8c8a32582c7705fe628f033af 326 SUPERFAMILY SSF53850 96 298 5.07E-25 T 14-10-2018 Atu5419 b52f5cb8c8a32582c7705fe628f033af 326 Gene3D G3DSA:3.40.190.290 95 298 1.3E-26 T 14-10-2018 Atu2487 51fa0455ef6358c83bf66e2adef566f6 291 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 8 274 4.3E-50 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Atu2487 51fa0455ef6358c83bf66e2adef566f6 291 SUPERFAMILY SSF53613 8 283 2.18E-55 T 14-10-2018 IPR029056 Ribokinase-like Atu2487 51fa0455ef6358c83bf66e2adef566f6 291 Gene3D G3DSA:3.40.1190.20 4 290 7.4E-67 T 14-10-2018 IPR029056 Ribokinase-like Atu2487 51fa0455ef6358c83bf66e2adef566f6 291 Pfam PF08543 Phosphomethylpyrimidine kinase 79 258 1.6E-13 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 SUPERFAMILY SSF51735 15 125 1.47E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 17 218 1.3E-61 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Gene3D G3DSA:3.30.160.110 126 161 3.8E-10 T 14-10-2018 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Pfam PF10414 Sirohaem synthase dimerisation region 163 220 2.2E-16 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Gene3D G3DSA:3.40.50.720 14 125 1.7E-22 T 14-10-2018 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Gene3D G3DSA:1.10.8.210 162 224 1.1E-6 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 228 462 3.1E-85 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 SUPERFAMILY SSF75615 127 222 8.63E-22 T 14-10-2018 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 233 247 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 229 439 1.9E-47 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 SUPERFAMILY SSF53790 225 461 1.57E-71 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 308 341 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Gene3D G3DSA:3.30.950.10 344 481 5.6E-31 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Pfam PF13241 Putative NAD(P)-binding 20 128 1.8E-17 T 14-10-2018 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 PIRSF PIRSF036426 14 479 2.1E-173 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu1454 065b68b8b03f9f6bdaf05cc8c7d75117 487 Gene3D G3DSA:3.40.1010.10 226 343 1.6E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 Pfam PF00990 Diguanylate cyclase, GGDEF domain 325 480 1.4E-44 T 14-10-2018 IPR000160 GGDEF domain Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 Gene3D G3DSA:1.20.1480.50 221 320 1.4E-10 T 14-10-2018 Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 SMART SM00052 497 738 6.5E-106 T 14-10-2018 IPR001633 EAL domain Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 Gene3D G3DSA:3.20.20.450 501 748 8.7E-92 T 14-10-2018 IPR035919 EAL domain superfamily Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 321 481 7.0E-41 T 14-10-2018 IPR000160 GGDEF domain Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 SUPERFAMILY SSF55073 330 489 4.71E-45 T 14-10-2018 IPR029787 Nucleotide cyclase Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 Pfam PF00563 EAL domain 505 733 1.7E-73 T 14-10-2018 IPR001633 EAL domain Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 SUPERFAMILY SSF158472 257 305 1.83E-6 T 14-10-2018 Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 SUPERFAMILY SSF141868 504 740 1.12E-84 T 14-10-2018 IPR035919 EAL domain superfamily Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 SMART SM00267 314 487 3.0E-57 T 14-10-2018 IPR000160 GGDEF domain Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 Pfam PF00672 HAMP domain 257 304 2.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 Gene3D G3DSA:3.30.70.270 321 500 2.7E-56 T 14-10-2018 Atu3244 87a57108f6ebe4b71971fadd83aba41e 772 SMART SM00304 257 310 0.002 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 SUPERFAMILY SSF50447 202 298 1.16E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 SUPERFAMILY SSF52540 6 216 1.32E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Gene3D G3DSA:2.40.30.10 204 331 8.1E-52 T 14-10-2018 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 144 1.6E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Pfam PF03143 Elongation factor Tu C-terminal domain 295 389 7.4E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 391 59.41 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 391 3.0E-220 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 SUPERFAMILY SSF50465 299 391 1.3E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Gene3D G3DSA:3.40.50.300 1 200 2.3E-68 T 14-10-2018 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Gene3D G3DSA:2.40.30.10 335 390 1.1E-26 T 14-10-2018 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Pfam PF03144 Elongation factor Tu domain 2 222 291 1.9E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu1966 d30e31000c723a7a3ee3990bebc6fdd6 391 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 2.8E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 SUPERFAMILY SSF50447 202 298 1.16E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 SUPERFAMILY SSF52540 6 216 1.32E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Gene3D G3DSA:2.40.30.10 204 331 8.1E-52 T 14-10-2018 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 144 1.6E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Pfam PF03143 Elongation factor Tu C-terminal domain 295 389 7.4E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 391 59.41 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 391 3.0E-220 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 SUPERFAMILY SSF50465 299 391 1.3E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.3E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Gene3D G3DSA:3.40.50.300 1 200 2.3E-68 T 14-10-2018 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Gene3D G3DSA:2.40.30.10 335 390 1.1E-26 T 14-10-2018 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Pfam PF03144 Elongation factor Tu domain 2 222 291 1.9E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu1948 d30e31000c723a7a3ee3990bebc6fdd6 391 Pfam PF00009 Elongation factor Tu GTP binding domain 10 198 2.8E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu4769 708b2dddcf4dcf5ba155788d79a20a97 239 SUPERFAMILY SSF102198 16 239 9.42E-57 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Atu4769 708b2dddcf4dcf5ba155788d79a20a97 239 Gene3D G3DSA:3.50.30.50 4 239 1.4E-70 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Atu4769 708b2dddcf4dcf5ba155788d79a20a97 239 Pfam PF04199 Putative cyclase 19 182 9.7E-34 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Atu0218 5d0b37e1207de12a0c7098b90d5de979 491 Gene3D G3DSA:3.30.450.380 56 231 6.5E-41 T 14-10-2018 Atu0218 5d0b37e1207de12a0c7098b90d5de979 491 Gene3D G3DSA:3.40.50.300 233 491 7.9E-72 T 14-10-2018 Atu0218 5d0b37e1207de12a0c7098b90d5de979 491 Pfam PF00437 Type II/IV secretion system protein 137 412 1.1E-76 T 14-10-2018 IPR001482 Type II/IV secretion system protein Atu0218 5d0b37e1207de12a0c7098b90d5de979 491 SUPERFAMILY SSF52540 117 438 1.05E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5364 fba5521aa627e5b7561f5139b5711d80 921 SUPERFAMILY SSF51126 36 493 5.02E-38 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Atu5364 fba5521aa627e5b7561f5139b5711d80 921 Gene3D G3DSA:2.160.20.20 346 492 6.0E-43 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Atu5364 fba5521aa627e5b7561f5139b5711d80 921 PRINTS PR01484 Pertactin virulence factor family signature 836 857 9.7E-7 T 14-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 Atu5364 fba5521aa627e5b7561f5139b5711d80 921 PRINTS PR01484 Pertactin virulence factor family signature 693 717 9.7E-7 T 14-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 Atu5364 fba5521aa627e5b7561f5139b5711d80 921 PRINTS PR01484 Pertactin virulence factor family signature 874 899 9.7E-7 T 14-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 Atu5364 fba5521aa627e5b7561f5139b5711d80 921 PRINTS PR01484 Pertactin virulence factor family signature 790 807 9.7E-7 T 14-10-2018 IPR003991 Pertactin virulence factor family GO:0007155 Atu5364 fba5521aa627e5b7561f5139b5711d80 921 Pfam PF03797 Autotransporter beta-domain 652 898 4.6E-52 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu5364 fba5521aa627e5b7561f5139b5711d80 921 Gene3D G3DSA:2.40.128.130 606 921 1.1E-84 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu5364 fba5521aa627e5b7561f5139b5711d80 921 SUPERFAMILY SSF103515 621 921 7.72E-44 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu5364 fba5521aa627e5b7561f5139b5711d80 921 SMART SM00869 648 908 3.1E-37 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu5364 fba5521aa627e5b7561f5139b5711d80 921 Gene3D G3DSA:2.160.20.160 109 321 4.0E-12 T 14-10-2018 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 Gene3D G3DSA:1.10.1040.10 284 489 3.6E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 219 444 1.4E-57 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 Gene3D G3DSA:3.40.50.720 3 283 9.4E-102 T 14-10-2018 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 30 190 7.9E-41 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 PRINTS PR00084 Mannitol dehydrogenase signature 250 265 7.1E-17 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 PRINTS PR00084 Mannitol dehydrogenase signature 181 194 7.1E-17 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 PRINTS PR00084 Mannitol dehydrogenase signature 31 41 7.1E-17 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 PRINTS PR00084 Mannitol dehydrogenase signature 220 233 7.1E-17 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu3530 325a07cc270b9f4a1205f97cf20646db 490 SUPERFAMILY SSF51735 5 284 2.64E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3530 325a07cc270b9f4a1205f97cf20646db 490 SUPERFAMILY SSF48179 285 487 1.09E-47 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2642 b55a26ddb74d596229c402331225554f 259 Pfam PF13534 4Fe-4S dicluster domain 169 242 5.9E-10 T 14-10-2018 Atu2642 b55a26ddb74d596229c402331225554f 259 SUPERFAMILY SSF46548 130 257 2.62E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atu2642 b55a26ddb74d596229c402331225554f 259 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 133 4.6E-32 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2642 b55a26ddb74d596229c402331225554f 259 Gene3D G3DSA:1.10.1060.10 129 259 2.4E-58 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atu2642 b55a26ddb74d596229c402331225554f 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 170 181 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu2642 b55a26ddb74d596229c402331225554f 259 Gene3D G3DSA:3.10.20.30 20 128 4.7E-43 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu2642 b55a26ddb74d596229c402331225554f 259 SUPERFAMILY SSF54292 28 128 1.12E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu2642 b55a26ddb74d596229c402331225554f 259 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 251 5.9E-81 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2642 b55a26ddb74d596229c402331225554f 259 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Atu3692 5cc1da4331d7767cc64b4a05dd7a76e9 180 SUPERFAMILY SSF88659 118 175 1.33E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu3692 5cc1da4331d7767cc64b4a05dd7a76e9 180 Pfam PF08281 Sigma-70, region 4 122 172 2.9E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu3692 5cc1da4331d7767cc64b4a05dd7a76e9 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 1.4E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu3692 5cc1da4331d7767cc64b4a05dd7a76e9 180 Gene3D G3DSA:1.10.10.10 94 179 3.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3692 5cc1da4331d7767cc64b4a05dd7a76e9 180 SUPERFAMILY SSF88946 13 99 2.83E-8 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 956 1227 2.3E-120 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Gene3D G3DSA:1.10.1240.10 661 749 7.6E-40 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 SUPERFAMILY SSF47644 664 751 3.4E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Pfam PF00809 Pterin binding enzyme 373 611 3.1E-60 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 PIRSF PIRSF000381 16 1215 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Gene3D G3DSA:1.10.288.10 955 1112 1.9E-142 T 14-10-2018 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Gene3D G3DSA:3.20.20.330 16 352 5.7E-128 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Gene3D G3DSA:3.20.20.20 353 655 2.7E-133 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 SUPERFAMILY SSF52242 759 911 4.58E-44 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 SUPERFAMILY SSF82282 21 412 1.96E-117 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 SUPERFAMILY SSF56507 919 1246 1.57E-130 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 SUPERFAMILY SSF51717 369 643 3.01E-89 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Pfam PF02310 B12 binding domain 765 854 3.5E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 SMART SM01018 669 752 6.6E-45 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Pfam PF02607 B12 binding domain 671 744 3.0E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 TIGRFAM TIGR02082 metH: methionine synthase 27 1212 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Pfam PF02574 Homocysteine S-methyltransferase 31 338 1.8E-80 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Gene3D G3DSA:3.10.196.10 926 1242 1.9E-142 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2155 3a89ec12cd064da96a38bb5242db8ede 1257 Gene3D G3DSA:3.40.50.280 761 913 8.1E-53 T 14-10-2018 Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 264 2.3E-6 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 33 269 7.7E-114 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 Gene3D G3DSA:3.40.50.300 32 269 2.5E-68 T 14-10-2018 Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 SMART SM00382 57 250 1.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 Pfam PF00005 ABC transporter 49 194 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0333 e584b630d41fa49caf5c9b9d280d02e7 269 SUPERFAMILY SSF52540 33 265 1.25E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 Gene3D G3DSA:1.10.3290.10 64 300 7.6E-54 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 Gene3D G3DSA:1.10.10.10 318 381 1.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 PIRSF PIRSF038925 18 385 4.2E-121 T 14-10-2018 IPR026287 Adenosine monophosphate-protein transferase Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 Pfam PF13784 Fic/DOC family N-terminal 44 125 1.4E-29 T 14-10-2018 IPR025758 Fic/DOC N-terminal Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 SUPERFAMILY SSF46785 318 376 3.67E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 Pfam PF02661 Fic/DOC family 132 236 3.6E-20 T 14-10-2018 IPR003812 Fido domain Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 SUPERFAMILY SSF140931 109 304 1.83E-45 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu5385 51bed802f7cbbdfb22014dfff4598e91 393 Pfam PF13412 Winged helix-turn-helix DNA-binding 320 361 2.4E-7 T 14-10-2018 Atu0493 dc293a60f123b1c32e61d173374a63ee 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atu0493 dc293a60f123b1c32e61d173374a63ee 167 Gene3D G3DSA:1.10.10.10 1 147 8.6E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0493 dc293a60f123b1c32e61d173374a63ee 167 Pfam PF02082 Transcriptional regulator 1 83 2.9E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu0493 dc293a60f123b1c32e61d173374a63ee 167 SUPERFAMILY SSF46785 4 141 2.06E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0493 dc293a60f123b1c32e61d173374a63ee 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 138 2.8E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu1774 550ac1210a992b050dc3d319b3509d45 615 Gene3D G3DSA:3.10.105.10 331 590 3.5E-218 T 14-10-2018 Atu1774 550ac1210a992b050dc3d319b3509d45 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 110 526 1.4E-69 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu1774 550ac1210a992b050dc3d319b3509d45 615 PIRSF PIRSF002741 12 614 1.9E-84 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu1774 550ac1210a992b050dc3d319b3509d45 615 Gene3D G3DSA:3.40.190.10 31 610 3.5E-218 T 14-10-2018 Atu1774 550ac1210a992b050dc3d319b3509d45 615 SUPERFAMILY SSF53850 54 610 5.43E-109 T 14-10-2018 Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 Gene3D G3DSA:3.40.50.720 1 246 3.1E-73 T 14-10-2018 Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 SUPERFAMILY SSF51735 1 237 1.57E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 Pfam PF00106 short chain dehydrogenase 9 199 2.2E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 3.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1074 ad9e2adc2fc30f826ccf117a50293028 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.4E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 PRINTS PR00412 Epoxide hydrolase signature 29 47 5.5E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 PRINTS PR00412 Epoxide hydrolase signature 219 235 5.5E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 PRINTS PR00412 Epoxide hydrolase signature 49 64 5.5E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 SUPERFAMILY SSF53474 1 277 5.5E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 Pfam PF00561 alpha/beta hydrolase fold 24 258 1.9E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5389 cd8561d439bd688a0a786c8a4d619f12 278 Gene3D G3DSA:3.40.50.1820 1 277 2.0E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4462 63607fe1010f6faa64b8c3a5a24d4c4a 343 Gene3D G3DSA:1.10.10.10 12 66 2.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4462 63607fe1010f6faa64b8c3a5a24d4c4a 343 Pfam PF04198 Putative sugar-binding domain 73 341 1.0E-58 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Atu4462 63607fe1010f6faa64b8c3a5a24d4c4a 343 SUPERFAMILY SSF100950 72 342 5.61E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu4462 63607fe1010f6faa64b8c3a5a24d4c4a 343 SUPERFAMILY SSF88659 28 61 3.53E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu4462 63607fe1010f6faa64b8c3a5a24d4c4a 343 Pfam PF13384 Homeodomain-like domain 20 56 4.3E-8 T 14-10-2018 Atu4462 63607fe1010f6faa64b8c3a5a24d4c4a 343 Gene3D G3DSA:3.40.50.1360 67 341 6.7E-67 T 14-10-2018 Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 Gene3D G3DSA:3.30.460.10 11 138 1.5E-15 T 14-10-2018 Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 Pfam PF05168 HEPN domain 173 277 6.9E-7 T 14-10-2018 IPR007842 HEPN domain Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 SUPERFAMILY SSF81593 173 275 5.89E-8 T 14-10-2018 Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 SMART SM00748 169 289 1.9E-32 T 14-10-2018 IPR007842 HEPN domain Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 Pfam PF01909 Nucleotidyltransferase domain 38 117 3.6E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 SUPERFAMILY SSF81301 6 128 1.01E-15 T 14-10-2018 Atu5117 3ad59c5439e22d2dc59e7a082cf49121 313 Gene3D G3DSA:1.20.120.330 152 307 2.0E-50 T 14-10-2018 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 Gene3D G3DSA:3.40.1410.10 86 247 8.9E-42 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu2606 6adf7239651b27db2dfff1b05a87b867 250 SUPERFAMILY SSF46785 14 84 2.69E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2606 6adf7239651b27db2dfff1b05a87b867 250 Pfam PF07702 UTRA domain 105 240 1.7E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.5E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 SUPERFAMILY SSF64288 69 246 1.73E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu2606 6adf7239651b27db2dfff1b05a87b867 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 81 3.7E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 SMART SM00866 104 240 1.5E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 SMART SM00345 22 81 1.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2606 6adf7239651b27db2dfff1b05a87b867 250 Gene3D G3DSA:1.10.10.10 17 85 2.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3375 54ed5d063e2729104b21cee8206b3971 525 Gene3D G3DSA:3.40.190.10 196 508 8.7E-107 T 14-10-2018 Atu3375 54ed5d063e2729104b21cee8206b3971 525 Gene3D G3DSA:3.90.76.10 41 195 8.7E-107 T 14-10-2018 Atu3375 54ed5d063e2729104b21cee8206b3971 525 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Atu3375 54ed5d063e2729104b21cee8206b3971 525 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 435 7.7E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3375 54ed5d063e2729104b21cee8206b3971 525 Gene3D G3DSA:3.10.105.10 282 499 8.7E-107 T 14-10-2018 Atu3375 54ed5d063e2729104b21cee8206b3971 525 SUPERFAMILY SSF53850 34 515 2.17E-110 T 14-10-2018 Atu3375 54ed5d063e2729104b21cee8206b3971 525 PIRSF PIRSF002741 25 517 2.4E-85 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 14.267 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 1.1E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 Gene3D G3DSA:1.20.5.1150 14 52 5.9E-10 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 8.7E-6 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 8.7E-6 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 8.7E-6 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 Pfam PF01165 Ribosomal protein S21 2 55 2.2E-20 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4064 78eb4e3b8bf72be667bf65a7bbfa6a54 75 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 41 6.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0282 f924419f5999cdd5c07c9efd4e12b303 212 SUPERFAMILY SSF53167 25 202 7.33E-31 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atu0282 f924419f5999cdd5c07c9efd4e12b303 212 Pfam PF01048 Phosphorylase superfamily 140 195 4.7E-8 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atu0282 f924419f5999cdd5c07c9efd4e12b303 212 Gene3D G3DSA:3.40.50.1580 3 212 2.0E-53 T 14-10-2018 Atu0282 f924419f5999cdd5c07c9efd4e12b303 212 TIGRFAM TIGR01705 MTA/SAH-nuc-hyp: putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 212 3.5E-134 T 14-10-2018 IPR010050 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 PIRSF PIRSF006276 1 136 2.5E-18 T 14-10-2018 IPR006015 Universal stress protein A Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 PRINTS PR01438 Universal stress protein signature 2 20 3.0E-11 T 14-10-2018 IPR006015 Universal stress protein A Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 PRINTS PR01438 Universal stress protein signature 97 109 3.0E-11 T 14-10-2018 IPR006015 Universal stress protein A Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 PRINTS PR01438 Universal stress protein signature 114 136 3.0E-11 T 14-10-2018 IPR006015 Universal stress protein A Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 Gene3D G3DSA:3.40.50.620 1 136 1.3E-30 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 Pfam PF00582 Universal stress protein family 1 134 6.1E-26 T 14-10-2018 IPR006016 UspA Atu0904 3c3eaff8b9f8b6c911976936703650b2 136 SUPERFAMILY SSF52402 1 136 8.29E-26 T 14-10-2018 Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 Gene3D G3DSA:3.40.50.12740 1 287 4.0E-89 T 14-10-2018 Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 450 2.6E-49 T 14-10-2018 IPR000160 GGDEF domain Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 Gene3D G3DSA:3.30.70.270 288 455 3.1E-58 T 14-10-2018 Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 SMART SM00448 3 116 2.5E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 SMART SM00448 155 267 3.7E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 SUPERFAMILY SSF52172 150 288 2.56E-21 T 14-10-2018 IPR011006 CheY-like superfamily Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 SMART SM00267 280 454 1.6E-64 T 14-10-2018 IPR000160 GGDEF domain Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 SUPERFAMILY SSF55073 296 452 9.42E-51 T 14-10-2018 IPR029787 Nucleotide cyclase Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 290 454 3.6E-56 T 14-10-2018 IPR000160 GGDEF domain Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 SUPERFAMILY SSF52172 2 136 6.12E-42 T 14-10-2018 IPR011006 CheY-like superfamily Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 Pfam PF00072 Response regulator receiver domain 157 266 1.1E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1297 ce77fe0b825ef1e452108cb8be9455eb 456 Pfam PF00072 Response regulator receiver domain 5 116 6.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu6084 47bbd6a448df9add12517a5467ae513a 450 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 426 1.9E-145 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu6084 47bbd6a448df9add12517a5467ae513a 450 PIRSF PIRSF000337 1 442 3.0E-174 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu6084 47bbd6a448df9add12517a5467ae513a 450 SUPERFAMILY SSF51679 1 433 1.11E-116 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu6084 47bbd6a448df9add12517a5467ae513a 450 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 3 14 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Atu6084 47bbd6a448df9add12517a5467ae513a 450 Pfam PF00296 Luciferase-like monooxygenase 17 380 5.4E-56 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu6084 47bbd6a448df9add12517a5467ae513a 450 Gene3D G3DSA:3.20.20.30 1 448 6.5E-140 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 SUPERFAMILY SSF51735 107 279 1.79E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 Gene3D G3DSA:3.40.50.720 106 247 3.0E-77 T 14-10-2018 Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 279 28.922 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 198 1.3E-8 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 22 94 1.8E-20 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 23 277 1.4E-64 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 SUPERFAMILY SSF53223 3 106 2.07E-28 T 14-10-2018 Atu4295 22a226eb119139b3c2ab0b7cfb82e637 282 Gene3D G3DSA:3.40.50.10860 16 267 3.0E-77 T 14-10-2018 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 Gene3D G3DSA:3.40.430.10 5 175 3.1E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 Pfam PF00186 Dihydrofolate reductase 6 170 2.9E-60 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 PRINTS PR00070 Dihydrofolate reductase signature 102 116 8.4E-14 T 14-10-2018 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 PRINTS PR00070 Dihydrofolate reductase signature 31 39 8.4E-14 T 14-10-2018 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 PRINTS PR00070 Dihydrofolate reductase signature 44 55 8.4E-14 T 14-10-2018 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 PRINTS PR00070 Dihydrofolate reductase signature 17 27 8.4E-14 T 14-10-2018 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 SUPERFAMILY SSF53597 5 171 4.06E-56 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu2046 520f032f3165bd407bc5871b2043c4ad 175 PIRSF PIRSF000194 1 173 5.4E-61 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Atu0495 9784aad516ed406c99abcddc3609147b 242 PIRSF PIRSF000887 22 242 8.9E-67 T 14-10-2018 IPR024173 Phosphoesterase, MJ0037 Atu0495 9784aad516ed406c99abcddc3609147b 242 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 23 220 3.7E-63 T 14-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated Atu0495 9784aad516ed406c99abcddc3609147b 242 Gene3D G3DSA:3.60.21.10 42 164 1.9E-9 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu0495 9784aad516ed406c99abcddc3609147b 242 Pfam PF00149 Calcineurin-like phosphoesterase 43 145 1.9E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu0495 9784aad516ed406c99abcddc3609147b 242 SUPERFAMILY SSF56300 41 136 2.53E-14 T 14-10-2018 Atu2372 3391a4cb94437f54c51e514c531d0bf1 314 SUPERFAMILY SSF53448 15 230 1.81E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu2372 3391a4cb94437f54c51e514c531d0bf1 314 Gene3D G3DSA:3.90.550.10 5 241 9.7E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu2372 3391a4cb94437f54c51e514c531d0bf1 314 Pfam PF00535 Glycosyl transferase family 2 16 179 1.4E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu1988 cd6b49c78a37340056d7225d334b7d51 330 Pfam PF07536 HWE histidine kinase 142 223 1.5E-23 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu1988 cd6b49c78a37340056d7225d334b7d51 330 Gene3D G3DSA:3.30.450.20 115 191 2.3E-5 T 14-10-2018 Atu1988 cd6b49c78a37340056d7225d334b7d51 330 SUPERFAMILY SSF52172 4 151 4.55E-23 T 14-10-2018 IPR011006 CheY-like superfamily Atu1988 cd6b49c78a37340056d7225d334b7d51 330 Pfam PF00072 Response regulator receiver domain 7 112 1.2E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1988 cd6b49c78a37340056d7225d334b7d51 330 SUPERFAMILY SSF55874 202 328 2.81E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1988 cd6b49c78a37340056d7225d334b7d51 330 SMART SM00911 142 223 4.4E-33 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu1988 cd6b49c78a37340056d7225d334b7d51 330 SMART SM00448 4 116 9.4E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1988 cd6b49c78a37340056d7225d334b7d51 330 Gene3D G3DSA:3.30.565.10 196 330 2.1E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1988 cd6b49c78a37340056d7225d334b7d51 330 Gene3D G3DSA:3.40.50.2300 1 114 6.6E-16 T 14-10-2018 Atu5247 6003da1262bbf66566f5c3d2042a4660 298 Gene3D G3DSA:1.10.3720.10 21 293 4.4E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu5247 6003da1262bbf66566f5c3d2042a4660 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 287 2.7E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5247 6003da1262bbf66566f5c3d2042a4660 298 SUPERFAMILY SSF161098 24 284 3.4E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 Gene3D G3DSA:2.30.40.10 7 426 6.1E-168 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 Gene3D G3DSA:3.20.20.140 71 390 6.1E-168 T 14-10-2018 Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 SUPERFAMILY SSF51338 27 86 2.31E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 SUPERFAMILY SSF51556 70 374 2.47E-91 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 1.1E-170 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 SUPERFAMILY SSF51338 353 432 1.22E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2315 9be69bf8bf4e0d84f550753d5e169473 436 Pfam PF01979 Amidohydrolase family 68 430 1.3E-53 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 208 5.3E-41 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 Gene3D G3DSA:3.40.50.10260 6 214 1.8E-54 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 436 446 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 Gene3D G3DSA:3.40.1190.20 225 490 4.2E-63 T 14-10-2018 IPR029056 Ribokinase-like Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 SUPERFAMILY SSF53613 226 487 2.24E-53 T 14-10-2018 IPR029056 Ribokinase-like Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 223 491 16.583 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 Pfam PF03853 YjeF-related protein N-terminus 31 187 3.5E-35 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 SUPERFAMILY SSF64153 9 245 1.96E-57 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 10 208 22.862 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 486 1.6E-49 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 Pfam PF01256 Carbohydrate kinase 248 479 1.7E-44 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Atu1768 481697d18d4b0b62ea65b471dfc6e38d 491 PIRSF PIRSF017184 7 489 9.7E-110 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Atu0514 9eb47247276b18280c14067f8d9e416e 568 SUPERFAMILY SSF58104 245 527 1.11E-52 T 14-10-2018 Atu0514 9eb47247276b18280c14067f8d9e416e 568 Gene3D G3DSA:1.10.490.10 46 204 2.9E-21 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atu0514 9eb47247276b18280c14067f8d9e416e 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 489 4.4E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0514 9eb47247276b18280c14067f8d9e416e 568 Pfam PF11563 Protoglobin 50 211 2.0E-31 T 14-10-2018 Atu0514 9eb47247276b18280c14067f8d9e416e 568 SUPERFAMILY SSF46458 50 204 8.06E-13 T 14-10-2018 IPR009050 Globin-like superfamily Atu0514 9eb47247276b18280c14067f8d9e416e 568 Gene3D G3DSA:1.10.287.950 229 527 2.4E-58 T 14-10-2018 Atu0514 9eb47247276b18280c14067f8d9e416e 568 SMART SM00283 278 525 1.1E-64 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0514 9eb47247276b18280c14067f8d9e416e 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 453 482 4.4E-34 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0514 9eb47247276b18280c14067f8d9e416e 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 4.4E-34 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0514 9eb47247276b18280c14067f8d9e416e 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.4E-34 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0514 9eb47247276b18280c14067f8d9e416e 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 4.4E-34 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3262 899e1ce0465a4f639c115896edadd10f 611 Pfam PF00005 ABC transporter 36 193 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3262 899e1ce0465a4f639c115896edadd10f 611 Pfam PF00005 ABC transporter 339 488 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3262 899e1ce0465a4f639c115896edadd10f 611 ProSitePatterns PS00211 ABC transporters family signature. 462 476 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3262 899e1ce0465a4f639c115896edadd10f 611 SMART SM00382 347 539 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3262 899e1ce0465a4f639c115896edadd10f 611 SMART SM00382 44 243 7.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3262 899e1ce0465a4f639c115896edadd10f 611 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3262 899e1ce0465a4f639c115896edadd10f 611 SUPERFAMILY SSF52540 15 265 2.15E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3262 899e1ce0465a4f639c115896edadd10f 611 SUPERFAMILY SSF52540 311 561 2.15E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3262 899e1ce0465a4f639c115896edadd10f 611 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 277 2.7E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3262 899e1ce0465a4f639c115896edadd10f 611 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 541 581 3.5E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3262 899e1ce0465a4f639c115896edadd10f 611 Gene3D G3DSA:3.40.50.300 310 604 8.6E-86 T 14-10-2018 Atu3262 899e1ce0465a4f639c115896edadd10f 611 Gene3D G3DSA:3.40.50.300 13 309 6.5E-88 T 14-10-2018 Atu1962 c52bb06e5e943ae01a72d5429b121a48 66 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 10 38 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1962 c52bb06e5e943ae01a72d5429b121a48 66 Hamap MF_00422 Protein translocase subunit SecE [secE]. 5 60 11.744 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1962 c52bb06e5e943ae01a72d5429b121a48 66 Gene3D G3DSA:1.20.5.1030 5 61 1.3E-16 T 14-10-2018 IPR038379 SecE superfamily Atu1962 c52bb06e5e943ae01a72d5429b121a48 66 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 9 60 1.8E-19 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1962 c52bb06e5e943ae01a72d5429b121a48 66 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 62 6.0E-23 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Atu4013 c8d7ce3773d03c40e1bed57f136327fe 414 SMART SM00044 188 389 1.1E-6 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Atu4013 c8d7ce3773d03c40e1bed57f136327fe 414 SUPERFAMILY SSF55073 221 406 2.2E-46 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4013 c8d7ce3773d03c40e1bed57f136327fe 414 Gene3D G3DSA:3.30.70.1230 219 412 5.1E-47 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4013 c8d7ce3773d03c40e1bed57f136327fe 414 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 229 404 5.3E-20 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Atu0614 6438dc78487c9928018d321712d116f1 1275 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1255 1268 8.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0614 6438dc78487c9928018d321712d116f1 1275 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1195 1209 8.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0614 6438dc78487c9928018d321712d116f1 1275 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1231 1249 8.4E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0614 6438dc78487c9928018d321712d116f1 1275 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1043 1111 1.8E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0614 6438dc78487c9928018d321712d116f1 1275 SUPERFAMILY SSF55785 919 1030 4.71E-18 T 14-10-2018 IPR035965 PAS domain superfamily Atu0614 6438dc78487c9928018d321712d116f1 1275 SMART SM00388 1042 1111 1.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0614 6438dc78487c9928018d321712d116f1 1275 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 907 1029 3.6E-12 T 14-10-2018 IPR000014 PAS domain Atu0614 6438dc78487c9928018d321712d116f1 1275 SUPERFAMILY SSF47384 1027 1113 9.81E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0614 6438dc78487c9928018d321712d116f1 1275 SUPERFAMILY SSF55874 1100 1269 8.12E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0614 6438dc78487c9928018d321712d116f1 1275 Gene3D G3DSA:1.10.287.130 1021 1109 2.5E-25 T 14-10-2018 Atu0614 6438dc78487c9928018d321712d116f1 1275 Gene3D G3DSA:3.30.450.20 904 1020 1.2E-19 T 14-10-2018 Atu0614 6438dc78487c9928018d321712d116f1 1275 SMART SM00091 417 486 32.0 T 14-10-2018 IPR000014 PAS domain Atu0614 6438dc78487c9928018d321712d116f1 1275 SMART SM00091 908 974 3.4E-8 T 14-10-2018 IPR000014 PAS domain Atu0614 6438dc78487c9928018d321712d116f1 1275 SMART SM00091 777 844 98.0 T 14-10-2018 IPR000014 PAS domain Atu0614 6438dc78487c9928018d321712d116f1 1275 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1159 1269 8.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0614 6438dc78487c9928018d321712d116f1 1275 SMART SM00387 1157 1271 2.7E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0614 6438dc78487c9928018d321712d116f1 1275 Pfam PF13188 PAS domain 783 817 3.2E-4 T 14-10-2018 IPR000014 PAS domain Atu0614 6438dc78487c9928018d321712d116f1 1275 Pfam PF00989 PAS fold 908 970 3.5E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 Atu0614 6438dc78487c9928018d321712d116f1 1275 Gene3D G3DSA:3.30.565.10 1118 1272 9.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu6124 04d7c07902e26c58b02267217a279f30 658 SUPERFAMILY SSF52540 179 629 6.37E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6124 04d7c07902e26c58b02267217a279f30 658 Gene3D G3DSA:3.40.50.300 404 625 6.0E-39 T 14-10-2018 Atu6124 04d7c07902e26c58b02267217a279f30 658 TIGRFAM TIGR02767 TraG-Ti: Ti-type conjugative transfer system protein TraG 5 634 0.0 T 14-10-2018 IPR014135 Ti-type conjugative transfer system, TraG Atu6124 04d7c07902e26c58b02267217a279f30 658 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 163 636 1.1E-165 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Atu0809 63521146c3cc8f3bcc304d2801798542 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 98 5.0E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu0809 63521146c3cc8f3bcc304d2801798542 103 Gene3D G3DSA:3.30.2310.20 3 103 3.6E-31 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu3022 beba2da1ea2e62aca9d77919615d8eeb 309 Gene3D G3DSA:1.10.3720.10 61 309 2.1E-66 T 14-10-2018 IPR035906 MetI-like superfamily Atu3022 beba2da1ea2e62aca9d77919615d8eeb 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 297 4.8E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3022 beba2da1ea2e62aca9d77919615d8eeb 309 SUPERFAMILY SSF161098 65 293 1.22E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 SUPERFAMILY SSF46689 166 216 1.75E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 SUPERFAMILY SSF46689 218 265 3.67E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 SMART SM00342 182 264 1.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 Gene3D G3DSA:1.10.10.60 164 225 3.8E-15 T 14-10-2018 Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 Pfam PF02311 AraC-like ligand binding domain 23 149 3.3E-23 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 SUPERFAMILY SSF51215 17 132 2.48E-15 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 Gene3D G3DSA:1.10.10.60 226 268 2.7E-7 T 14-10-2018 Atu0865 7ada4cef1559c1d03ab8775d04f5235d 268 Pfam PF12833 Helix-turn-helix domain 188 265 3.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 Pfam PF00206 Lyase 19 291 9.7E-36 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 2.1E-10 T 14-10-2018 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 2.1E-10 T 14-10-2018 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00145 Argininosuccinate lyase family signature 272 288 2.1E-10 T 14-10-2018 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 2.1E-10 T 14-10-2018 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 ProSitePatterns PS00163 Fumarate lyases signature. 272 281 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00149 Fumarate lyase superfamily signature 272 288 9.5E-20 T 14-10-2018 IPR000362 Fumarate lyase family Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 9.5E-20 T 14-10-2018 IPR000362 Fumarate lyase family Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 9.5E-20 T 14-10-2018 IPR000362 Fumarate lyase family Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 9.5E-20 T 14-10-2018 IPR000362 Fumarate lyase family Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 SUPERFAMILY SSF48557 10 345 5.97E-70 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 10 345 5.9E-137 T 14-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 Atu4538 a0e2eb00bdb8fd85d6f7f376b2cb7862 353 Gene3D G3DSA:1.20.200.30 1 353 2.5E-132 T 14-10-2018 Atu5478 be8400dede249d9f3096637909e44975 365 Gene3D G3DSA:3.20.20.120 118 363 2.8E-58 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu5478 be8400dede249d9f3096637909e44975 365 SUPERFAMILY SSF54826 18 122 8.49E-10 T 14-10-2018 Atu5478 be8400dede249d9f3096637909e44975 365 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 188 219 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Atu5478 be8400dede249d9f3096637909e44975 365 SMART SM00922 141 238 2.4E-21 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu5478 be8400dede249d9f3096637909e44975 365 Pfam PF13378 Enolase C-terminal domain-like 146 354 1.1E-41 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu5478 be8400dede249d9f3096637909e44975 365 Gene3D G3DSA:3.30.390.10 5 117 4.3E-8 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu5478 be8400dede249d9f3096637909e44975 365 SUPERFAMILY SSF51604 109 355 7.07E-52 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu0026 6f8e0c748b123580e7111df61705ee3c 503 Gene3D G3DSA:3.30.200.20 155 258 1.2E-24 T 14-10-2018 Atu0026 6f8e0c748b123580e7111df61705ee3c 503 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 15 135 2.3E-32 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Atu0026 6f8e0c748b123580e7111df61705ee3c 503 PIRSF PIRSF036599 2 503 1.8E-265 T 14-10-2018 IPR012180 Predicted bifunctional ATPase/phosphotransferase Atu0026 6f8e0c748b123580e7111df61705ee3c 503 Gene3D G3DSA:3.90.1200.10 260 501 2.3E-65 T 14-10-2018 Atu0026 6f8e0c748b123580e7111df61705ee3c 503 Gene3D G3DSA:3.40.50.300 7 154 9.4E-35 T 14-10-2018 Atu0026 6f8e0c748b123580e7111df61705ee3c 503 SUPERFAMILY SSF52540 22 133 2.57E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0026 6f8e0c748b123580e7111df61705ee3c 503 Pfam PF01636 Phosphotransferase enzyme family 172 436 2.5E-28 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Atu0026 6f8e0c748b123580e7111df61705ee3c 503 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 14 143 2.1E-30 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Atu0026 6f8e0c748b123580e7111df61705ee3c 503 SUPERFAMILY SSF56112 158 493 2.89E-49 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu1859 96174ce710e3a2fa69c04cf08e6278e3 309 Gene3D G3DSA:3.40.710.10 1 309 3.6E-114 T 14-10-2018 Atu1859 96174ce710e3a2fa69c04cf08e6278e3 309 Hamap MF_00313 Glutaminase [glsA]. 4 307 47.507 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Atu1859 96174ce710e3a2fa69c04cf08e6278e3 309 Pfam PF04960 Glutaminase 22 307 2.7E-118 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Atu1859 96174ce710e3a2fa69c04cf08e6278e3 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 307 1.0E-131 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Atu1859 96174ce710e3a2fa69c04cf08e6278e3 309 SUPERFAMILY SSF56601 3 307 1.25E-116 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu2585 31fa18709b9274f81a719ef8650602b1 279 Gene3D G3DSA:3.90.550.20 66 211 1.2E-16 T 14-10-2018 Atu2585 31fa18709b9274f81a719ef8650602b1 279 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 127 154 7.3E-5 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif Atu2585 31fa18709b9274f81a719ef8650602b1 279 SUPERFAMILY SSF53448 14 240 4.31E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1136 27dbde617a45411688b9664505622be8 718 Gene3D G3DSA:3.40.228.10 154 534 5.3E-104 T 14-10-2018 Atu1136 27dbde617a45411688b9664505622be8 718 SUPERFAMILY SSF50692 587 711 1.54E-28 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu1136 27dbde617a45411688b9664505622be8 718 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 22 74 3.8E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1136 27dbde617a45411688b9664505622be8 718 Gene3D G3DSA:3.30.2070.10 448 532 5.3E-104 T 14-10-2018 Atu1136 27dbde617a45411688b9664505622be8 718 Gene3D G3DSA:3.40.50.740 88 493 5.3E-104 T 14-10-2018 Atu1136 27dbde617a45411688b9664505622be8 718 Gene3D G3DSA:2.40.40.20 574 715 5.4E-21 T 14-10-2018 Atu1136 27dbde617a45411688b9664505622be8 718 SMART SM00926 18 74 1.1E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1136 27dbde617a45411688b9664505622be8 718 Gene3D G3DSA:2.20.25.90 12 78 5.7E-7 T 14-10-2018 Atu1136 27dbde617a45411688b9664505622be8 718 Pfam PF00384 Molybdopterin oxidoreductase 77 489 1.5E-47 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1136 27dbde617a45411688b9664505622be8 718 Pfam PF01568 Molydopterin dinucleotide binding domain 596 700 1.8E-18 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atu1136 27dbde617a45411688b9664505622be8 718 SUPERFAMILY SSF53706 21 559 1.57E-131 T 14-10-2018 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 Gene3D G3DSA:1.20.1220.12 603 744 1.9E-74 T 14-10-2018 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 Gene3D G3DSA:2.170.170.11 155 283 2.5E-280 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 Hamap MF_00641 Malate synthase G [glcB]. 1 744 405.729 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 SUPERFAMILY SSF51645 24 741 1.15E-304 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 27 741 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 Gene3D G3DSA:3.20.20.360 31 601 2.5E-280 T 14-10-2018 Atu0047 61f25989225d5c8c5c62a673d56e9f16 744 Pfam PF01274 Malate synthase 39 716 8.9E-169 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Atu3487 d2c2baa690ba663ee7c5fa1633db05c3 336 Pfam PF13407 Periplasmic binding protein domain 34 291 4.6E-62 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3487 d2c2baa690ba663ee7c5fa1633db05c3 336 SUPERFAMILY SSF53822 31 332 1.18E-73 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3487 d2c2baa690ba663ee7c5fa1633db05c3 336 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 34 334 1.9E-157 T 14-10-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 Atu3487 d2c2baa690ba663ee7c5fa1633db05c3 336 Gene3D G3DSA:3.40.50.2300 33 318 3.1E-110 T 14-10-2018 Atu3487 d2c2baa690ba663ee7c5fa1633db05c3 336 Gene3D G3DSA:3.40.50.2300 135 332 3.1E-110 T 14-10-2018 Atu1378 88b20821bf08b08a733b902d93e06c89 247 Pfam PF01255 Putative undecaprenyl diphosphate synthase 16 236 5.1E-83 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Atu1378 88b20821bf08b08a733b902d93e06c89 247 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Atu1378 88b20821bf08b08a733b902d93e06c89 247 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 9 237 40.923 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Atu1378 88b20821bf08b08a733b902d93e06c89 247 Gene3D G3DSA:3.40.1180.10 2 238 4.5E-99 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Atu1378 88b20821bf08b08a733b902d93e06c89 247 SUPERFAMILY SSF64005 6 231 1.96E-89 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Atu1378 88b20821bf08b08a733b902d93e06c89 247 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 236 3.2E-85 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 PIRSF PIRSF000171 12 599 2.9E-32 T 14-10-2018 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 SUPERFAMILY SSF56425 250 368 1.79E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 Gene3D G3DSA:1.20.58.100 446 560 4.4E-38 T 14-10-2018 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 SUPERFAMILY SSF51905 14 450 3.97E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 Pfam PF00890 FAD binding domain 22 418 4.3E-123 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 Gene3D G3DSA:4.10.80.40 565 613 1.8E-8 T 14-10-2018 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 SUPERFAMILY SSF46977 464 613 1.02E-45 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 Gene3D G3DSA:3.90.700.10 260 363 3.7E-163 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 56 65 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 613 2.8E-41 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 Gene3D G3DSA:3.50.50.60 22 429 3.7E-163 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 22 613 2.2E-231 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2643 e1a5d56c97402640dc0fa60b33333b1f 613 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 19 613 2.7E-279 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu3900 fd75035850101139a6da5c075d54da6b 882 Gene3D G3DSA:3.40.228.10 133 334 7.5E-176 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 Gene3D G3DSA:2.40.40.20 565 700 4.6E-39 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 55 4.0E-20 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu3900 fd75035850101139a6da5c075d54da6b 882 Gene3D G3DSA:3.40.50.740 68 534 7.5E-176 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 SMART SM00926 2 56 2.6E-22 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu3900 fd75035850101139a6da5c075d54da6b 882 SUPERFAMILY SSF50692 551 694 2.71E-44 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu3900 fd75035850101139a6da5c075d54da6b 882 Pfam PF00384 Molybdopterin oxidoreductase 69 481 1.7E-77 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu3900 fd75035850101139a6da5c075d54da6b 882 Gene3D G3DSA:2.20.25.90 2 56 1.1E-19 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 SUPERFAMILY SSF53706 5 580 9.55E-189 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 24 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Atu3900 fd75035850101139a6da5c075d54da6b 882 Pfam PF01568 Molydopterin dinucleotide binding domain 578 688 1.9E-31 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atu3900 fd75035850101139a6da5c075d54da6b 882 PIRSF PIRSF036643 2 707 4.0E-158 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 Gene3D G3DSA:1.10.10.1100 826 879 2.0E-10 T 14-10-2018 Atu3900 fd75035850101139a6da5c075d54da6b 882 Pfam PF04324 BFD-like [2Fe-2S] binding domain 826 874 2.3E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 SUPERFAMILY SSF46785 9 86 3.53E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 2.7E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 Gene3D G3DSA:3.40.190.10 107 292 5.2E-55 T 14-10-2018 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 SUPERFAMILY SSF53850 99 298 3.41E-37 T 14-10-2018 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 Gene3D G3DSA:3.40.190.10 167 265 5.2E-55 T 14-10-2018 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.7E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 Pfam PF03466 LysR substrate binding domain 97 295 2.0E-34 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4151 5bf2590aa4b45daa1a3aea2b91dcd44c 300 Gene3D G3DSA:1.10.10.10 10 92 1.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4500 8580e05365ed6a1953552b30d9731f85 410 Pfam PF07690 Major Facilitator Superfamily 35 370 3.5E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu4500 8580e05365ed6a1953552b30d9731f85 410 SUPERFAMILY SSF103473 30 407 5.67E-27 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4500 8580e05365ed6a1953552b30d9731f85 410 Gene3D G3DSA:1.20.1250.20 29 213 1.9E-11 T 14-10-2018 Atu4500 8580e05365ed6a1953552b30d9731f85 410 Gene3D G3DSA:1.20.1250.20 225 410 6.1E-12 T 14-10-2018 Atu1499 362aef095c69793169240d98d9a7c20a 390 Gene3D G3DSA:3.40.710.10 16 279 4.9E-62 T 14-10-2018 Atu1499 362aef095c69793169240d98d9a7c20a 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 3.3E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu1499 362aef095c69793169240d98d9a7c20a 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 3.3E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu1499 362aef095c69793169240d98d9a7c20a 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 3.3E-10 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu1499 362aef095c69793169240d98d9a7c20a 390 SUPERFAMILY SSF56601 11 279 8.31E-62 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu1499 362aef095c69793169240d98d9a7c20a 390 Gene3D G3DSA:2.60.410.10 281 370 6.5E-15 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atu1499 362aef095c69793169240d98d9a7c20a 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 255 3.6E-53 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atu1499 362aef095c69793169240d98d9a7c20a 390 SMART SM00936 281 371 5.4E-21 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atu1499 362aef095c69793169240d98d9a7c20a 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 370 1.8E-18 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atu1499 362aef095c69793169240d98d9a7c20a 390 SUPERFAMILY SSF69189 281 373 3.53E-17 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Atu2322 838b7c2c4281511a004ba8447abb3473 247 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 203 1.1E-21 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Atu2322 838b7c2c4281511a004ba8447abb3473 247 PIRSF PIRSF000883 1 247 6.1E-62 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 Atu2322 838b7c2c4281511a004ba8447abb3473 247 SUPERFAMILY SSF56300 1 236 4.25E-47 T 14-10-2018 Atu2322 838b7c2c4281511a004ba8447abb3473 247 Gene3D G3DSA:3.60.21.10 1 245 6.4E-47 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 503 1.0E-186 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 Gene3D G3DSA:3.40.720.10 6 503 9.6E-192 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 SUPERFAMILY SSF64158 79 295 3.14E-72 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 Gene3D G3DSA:3.40.1450.10 78 305 9.6E-192 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 PIRSF PIRSF001492 1 505 7.5E-196 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 290 4.2E-68 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 504 45.11 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 Pfam PF01676 Metalloenzyme superfamily 5 491 6.3E-72 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Atu3469 38820566d0cb7bf22a7c2e9e593b9b1a 505 SUPERFAMILY SSF53649 4 503 8.43E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 SMART SM00382 54 254 2.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4664 96b9cd4cefc4104723364b344f2800b7 555 SMART SM00382 332 525 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4664 96b9cd4cefc4104723364b344f2800b7 555 SUPERFAMILY SSF52540 315 547 3.29E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4664 96b9cd4cefc4104723364b344f2800b7 555 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 SUPERFAMILY SSF52540 25 276 2.66E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4664 96b9cd4cefc4104723364b344f2800b7 555 Pfam PF00005 ABC transporter 324 476 5.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 Pfam PF00005 ABC transporter 45 204 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 Gene3D G3DSA:3.40.50.300 23 293 2.8E-87 T 14-10-2018 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 Gene3D G3DSA:3.40.50.300 294 555 1.0E-81 T 14-10-2018 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 554 0.0042 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4664 96b9cd4cefc4104723364b344f2800b7 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 257 285 3.5E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5198 630ce65e7ed76788047d962df76fe08d 338 Gene3D G3DSA:3.20.20.100 1 334 2.1E-121 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu5198 630ce65e7ed76788047d962df76fe08d 338 SUPERFAMILY SSF51430 1 319 1.3E-99 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu5198 630ce65e7ed76788047d962df76fe08d 338 Pfam PF00248 Aldo/keto reductase family 15 318 1.8E-79 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4753 6edea17989531e09df2eedcb7243f436 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 220 1.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4753 6edea17989531e09df2eedcb7243f436 230 TIGRFAM TIGR03003 ectoine_ehuD: ectoine/hydroxyectoine ABC transporter, permease protein EhuD 5 222 4.8E-113 T 14-10-2018 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD Atu4753 6edea17989531e09df2eedcb7243f436 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 117 3.5E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4753 6edea17989531e09df2eedcb7243f436 230 Gene3D G3DSA:1.10.3720.10 13 224 4.3E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu4753 6edea17989531e09df2eedcb7243f436 230 SUPERFAMILY SSF161098 21 208 3.79E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu1675 431e75935d8c6239a9022f48f001a4ca 365 SUPERFAMILY SSF46894 292 361 1.5E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu1675 431e75935d8c6239a9022f48f001a4ca 365 SMART SM00421 300 357 2.4E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1675 431e75935d8c6239a9022f48f001a4ca 365 Gene3D G3DSA:1.10.10.10 190 363 1.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1675 431e75935d8c6239a9022f48f001a4ca 365 Pfam PF00196 Bacterial regulatory proteins, luxR family 303 356 1.9E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2291 d3afafbbaa4e0e5b1024e1074bd37615 315 SUPERFAMILY SSF109604 137 304 1.01E-29 T 14-10-2018 Atu2291 d3afafbbaa4e0e5b1024e1074bd37615 315 SMART SM00471 143 279 1.1E-11 T 14-10-2018 IPR003607 HD/PDEase domain Atu2291 d3afafbbaa4e0e5b1024e1074bd37615 315 Gene3D G3DSA:1.10.3210.10 5 310 1.4E-65 T 14-10-2018 Atu2291 d3afafbbaa4e0e5b1024e1074bd37615 315 Pfam PF11871 Domain of unknown function (DUF3391) 2 78 1.6E-11 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 Atu2291 d3afafbbaa4e0e5b1024e1074bd37615 315 Pfam PF01966 HD domain 148 269 5.3E-16 T 14-10-2018 IPR006674 HD domain Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 103 115 4.6E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 181 200 4.6E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 32 48 4.6E-25 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 ProSitePatterns PS00760 Signal peptidases I lysine active site. 105 117 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 ProSitePatterns PS00501 Signal peptidases I serine active site. 41 48 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 SUPERFAMILY SSF51306 30 246 1.39E-68 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 Gene3D G3DSA:2.10.109.10 30 221 5.4E-65 T 14-10-2018 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 16 222 5.6E-53 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 Gene3D G3DSA:2.170.230.10 114 180 5.4E-65 T 14-10-2018 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 Pfam PF00717 Peptidase S24-like 38 126 2.7E-23 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 Pfam PF10502 Signal peptidase, peptidase S26 177 218 8.8E-6 T 14-10-2018 IPR019533 Peptidase S26 Atu1034 53465d5fe697f8e381b42ea030e3bba4 248 ProSitePatterns PS00761 Signal peptidases I signature 3. 186 199 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Atu0573 d4bc5cd9fb4d27972cd11a42ed8d058f 223 SUPERFAMILY SSF52172 2 124 3.13E-10 T 14-10-2018 IPR011006 CheY-like superfamily Atu0573 d4bc5cd9fb4d27972cd11a42ed8d058f 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 1.0E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0573 d4bc5cd9fb4d27972cd11a42ed8d058f 223 Gene3D G3DSA:3.40.50.2300 1 120 3.4E-8 T 14-10-2018 Atu0573 d4bc5cd9fb4d27972cd11a42ed8d058f 223 SUPERFAMILY SSF46894 123 220 5.95E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0573 d4bc5cd9fb4d27972cd11a42ed8d058f 223 Gene3D G3DSA:1.10.10.10 123 222 2.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0573 d4bc5cd9fb4d27972cd11a42ed8d058f 223 SMART SM00862 144 220 1.1E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 806 4.6E-219 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SMART SM00896 713 806 1.1E-35 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SMART SM00873 214 386 2.5E-86 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Pfam PF03483 B3/4 domain 215 386 1.5E-64 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Gene3D G3DSA:3.30.70.380 714 807 1.0E-22 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SUPERFAMILY SSF56037 201 395 3.92E-72 T 14-10-2018 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Pfam PF03484 tRNA synthetase B5 domain 405 469 3.9E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SUPERFAMILY SSF54991 710 806 4.32E-25 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Gene3D G3DSA:3.30.56.10 5 181 3.1E-66 T 14-10-2018 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Gene3D G3DSA:3.30.930.10 490 697 3.4E-46 T 14-10-2018 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Pfam PF01588 Putative tRNA binding domain 44 145 1.9E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 800 42.153 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Gene3D G3DSA:2.40.50.140 38 154 3.1E-66 T 14-10-2018 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SUPERFAMILY SSF50249 39 195 4.28E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SUPERFAMILY SSF46955 402 474 1.46E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Gene3D G3DSA:3.30.56.10 402 474 4.3E-21 T 14-10-2018 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Pfam PF03147 Ferredoxin-fold anticodon binding domain 713 806 1.0E-22 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SUPERFAMILY SSF55681 466 697 5.96E-42 T 14-10-2018 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 SMART SM00874 402 470 3.4E-25 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Atu0259 c2ffa395f081c2534bb77acb8d8f1aba 807 Gene3D G3DSA:3.50.40.10 195 398 4.4E-73 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Atu5425 0c2b6ecd30634a173a482055b1b10e21 197 PIRSF PIRSF006386 1 197 1.1E-60 T 14-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Atu5425 0c2b6ecd30634a173a482055b1b10e21 197 Gene3D G3DSA:3.40.30.10 5 197 1.8E-45 T 14-10-2018 Atu5425 0c2b6ecd30634a173a482055b1b10e21 197 Pfam PF01323 DSBA-like thioredoxin domain 12 194 4.1E-30 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Atu5425 0c2b6ecd30634a173a482055b1b10e21 197 SUPERFAMILY SSF52833 4 196 3.73E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu5333 39d651bc70a909bb83e039d964f98541 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 294 1.4E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu5333 39d651bc70a909bb83e039d964f98541 326 Gene3D G3DSA:3.40.50.720 104 293 5.5E-109 T 14-10-2018 Atu5333 39d651bc70a909bb83e039d964f98541 326 SUPERFAMILY SSF52283 11 143 1.13E-27 T 14-10-2018 Atu5333 39d651bc70a909bb83e039d964f98541 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 322 6.7E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu5333 39d651bc70a909bb83e039d964f98541 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu5333 39d651bc70a909bb83e039d964f98541 326 SUPERFAMILY SSF51735 108 295 1.01E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5333 39d651bc70a909bb83e039d964f98541 326 Gene3D G3DSA:3.40.50.720 23 323 5.5E-109 T 14-10-2018 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 Gene3D G3DSA:2.40.50.100 2 99 1.5E-22 T 14-10-2018 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 Gene3D G3DSA:3.30.559.10 184 424 1.6E-80 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 SUPERFAMILY SSF52777 186 423 6.23E-79 T 14-10-2018 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 Pfam PF02817 e3 binding domain 139 173 5.3E-11 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 Gene3D G3DSA:4.10.320.10 129 179 4.5E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 196 423 1.2E-75 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 SUPERFAMILY SSF47005 132 177 3.79E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 Pfam PF00364 Biotin-requiring enzyme 6 77 1.6E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu3471 1fc468f9a41a24f00cf0b8f81e8d1f2a 425 SUPERFAMILY SSF51230 4 96 1.2E-24 T 14-10-2018 IPR011053 Single hybrid motif Atu4196 a260f38c411ed9fb191362663f31f35b 395 SMART SM00922 129 237 9.2E-7 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu4196 a260f38c411ed9fb191362663f31f35b 395 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 110 3.8E-16 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu4196 a260f38c411ed9fb191362663f31f35b 395 Gene3D G3DSA:3.30.390.10 1 107 1.4E-29 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu4196 a260f38c411ed9fb191362663f31f35b 395 SUPERFAMILY SSF51604 98 374 4.85E-62 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4196 a260f38c411ed9fb191362663f31f35b 395 SUPERFAMILY SSF54826 1 114 2.12E-28 T 14-10-2018 Atu4196 a260f38c411ed9fb191362663f31f35b 395 Gene3D G3DSA:3.20.20.120 108 378 3.8E-106 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4196 a260f38c411ed9fb191362663f31f35b 395 Pfam PF13378 Enolase C-terminal domain-like 136 370 2.6E-52 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu1289 fb8e379c2f6ed37cf17e1983f774a226 435 Pfam PF12704 MacB-like periplasmic core domain 51 255 1.8E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Atu1289 fb8e379c2f6ed37cf17e1983f774a226 435 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 25 435 3.8E-150 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Atu1289 fb8e379c2f6ed37cf17e1983f774a226 435 Pfam PF02687 FtsX-like permease family 322 428 3.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 Gene3D G3DSA:1.10.10.10 2 89 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 Gene3D G3DSA:3.40.190.290 91 289 9.2E-69 T 14-10-2018 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 SUPERFAMILY SSF53850 90 293 3.57E-48 T 14-10-2018 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.8E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 SUPERFAMILY SSF46785 2 112 1.48E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0664 097fd93e87a0cbb24c75e86e8e5ab959 299 Pfam PF03466 LysR substrate binding domain 89 287 7.4E-46 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1453 323f49f62f6d06f8beda077ab5236af6 195 SUPERFAMILY SSF53927 19 145 2.26E-21 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atu1453 323f49f62f6d06f8beda077ab5236af6 195 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 29 105 2.0E-8 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Atu1453 323f49f62f6d06f8beda077ab5236af6 195 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 60 97 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Atu1453 323f49f62f6d06f8beda077ab5236af6 195 Gene3D G3DSA:3.40.140.10 15 134 1.7E-15 T 14-10-2018 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 SMART SM00388 211 277 8.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 8.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 8.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 8.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 SMART SM00387 317 428 3.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 425 2.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 SUPERFAMILY SSF47384 200 273 4.71E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 SUPERFAMILY SSF55874 277 428 2.62E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 Gene3D G3DSA:1.10.287.130 195 274 1.3E-9 T 14-10-2018 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 273 3.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0051 b772e97212cab418a2e5157cb88d2d9f 435 Gene3D G3DSA:3.30.565.10 278 433 6.5E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4739 92d56cbe45606052493c64592332f77f 600 SUPERFAMILY SSF51905 168 562 3.89E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4739 92d56cbe45606052493c64592332f77f 600 Pfam PF12680 SnoaL-like domain 19 114 3.6E-7 T 14-10-2018 IPR037401 SnoaL-like domain Atu4739 92d56cbe45606052493c64592332f77f 600 Gene3D G3DSA:3.50.50.60 157 424 6.9E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4739 92d56cbe45606052493c64592332f77f 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 357 4.3E-9 T 14-10-2018 Atu4739 92d56cbe45606052493c64592332f77f 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 189 4.3E-9 T 14-10-2018 Atu4739 92d56cbe45606052493c64592332f77f 600 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 300 4.3E-9 T 14-10-2018 Atu4739 92d56cbe45606052493c64592332f77f 600 Gene3D G3DSA:3.10.450.50 5 122 1.7E-8 T 14-10-2018 Atu4739 92d56cbe45606052493c64592332f77f 600 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 169 364 1.6E-20 T 14-10-2018 Atu4739 92d56cbe45606052493c64592332f77f 600 SUPERFAMILY SSF54427 11 116 6.53E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu3088 dd6105974816109aca1a2bb0a4772c66 429 Gene3D G3DSA:3.40.190.10 53 177 7.7E-6 T 14-10-2018 Atu3088 dd6105974816109aca1a2bb0a4772c66 429 Pfam PF13416 Bacterial extracellular solute-binding protein 60 359 2.2E-21 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3088 dd6105974816109aca1a2bb0a4772c66 429 Gene3D G3DSA:3.40.190.10 178 344 1.7E-28 T 14-10-2018 Atu3088 dd6105974816109aca1a2bb0a4772c66 429 SUPERFAMILY SSF53850 46 427 6.73E-53 T 14-10-2018 Atu4313 024a8efe43e56b1057fa8974a51cf083 186 Gene3D G3DSA:3.30.1360.120 25 180 3.4E-33 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu4313 024a8efe43e56b1057fa8974a51cf083 186 Pfam PF04268 Sarcosine oxidase, gamma subunit family 41 178 4.5E-25 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4313 024a8efe43e56b1057fa8974a51cf083 186 Gene3D G3DSA:3.30.70.1520 28 105 3.4E-33 T 14-10-2018 Atu4313 024a8efe43e56b1057fa8974a51cf083 186 SUPERFAMILY SSF103025 66 180 3.34E-11 T 14-10-2018 Atu4313 024a8efe43e56b1057fa8974a51cf083 186 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 34 180 2.3E-57 T 14-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu0266 ae1958e076e21a2587574b94b0b2abb3 327 Gene3D G3DSA:3.30.360.10 121 327 6.2E-51 T 14-10-2018 Atu0266 ae1958e076e21a2587574b94b0b2abb3 327 SUPERFAMILY SSF55347 128 295 1.23E-35 T 14-10-2018 Atu0266 ae1958e076e21a2587574b94b0b2abb3 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 120 4.0E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu0266 ae1958e076e21a2587574b94b0b2abb3 327 Gene3D G3DSA:3.40.50.720 1 120 2.3E-38 T 14-10-2018 Atu0266 ae1958e076e21a2587574b94b0b2abb3 327 SUPERFAMILY SSF51735 2 154 8.63E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4593 5ce6e336a6c522234a71b7def5aeb59e 282 Gene3D G3DSA:3.90.850.10 67 280 2.5E-80 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu4593 5ce6e336a6c522234a71b7def5aeb59e 282 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 277 1.3E-62 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Atu4593 5ce6e336a6c522234a71b7def5aeb59e 282 SUPERFAMILY SSF56529 59 278 2.35E-77 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 SMART SM00965 68 119 4.5E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 Gene3D G3DSA:2.170.130.10 145 281 1.0E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 SUPERFAMILY SSF56935 128 819 3.43E-139 T 14-10-2018 Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 Gene3D G3DSA:3.55.50.30 39 144 2.5E-27 T 14-10-2018 Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 Pfam PF07715 TonB-dependent Receptor Plug Domain 168 270 4.7E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 169 818 9.3E-125 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 Gene3D G3DSA:2.40.170.20 282 819 4.5E-134 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 Pfam PF07660 Secretin and TonB N terminus short domain 69 115 2.5E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Atu5311 7a03cf1cf8914638a4521a30d8d2fd23 819 Pfam PF00593 TonB dependent receptor 360 818 4.9E-61 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu2651 d86463fccaf323236472385528275a26 365 Gene3D G3DSA:3.30.420.40 7 331 2.4E-121 T 14-10-2018 Atu2651 d86463fccaf323236472385528275a26 365 SUPERFAMILY SSF53067 110 325 4.53E-41 T 14-10-2018 Atu2651 d86463fccaf323236472385528275a26 365 SUPERFAMILY SSF53067 7 131 1.42E-28 T 14-10-2018 Atu2651 d86463fccaf323236472385528275a26 365 Gene3D G3DSA:3.30.420.40 136 309 2.4E-121 T 14-10-2018 Atu2651 d86463fccaf323236472385528275a26 365 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 329 1.0E-126 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Atu2651 d86463fccaf323236472385528275a26 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 161 182 8.5E-45 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 84 104 8.5E-45 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 138 150 8.5E-45 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 279 288 8.5E-45 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 8.5E-45 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 105 124 8.5E-45 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 322 1.5E-98 T 14-10-2018 IPR017861 Kae1/TsaD family Atu2651 d86463fccaf323236472385528275a26 365 Pfam PF00814 Glycoprotease family 31 323 4.9E-100 T 14-10-2018 IPR000905 Gcp-like domain Atu2651 d86463fccaf323236472385528275a26 365 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 348 63.091 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Atu4449 6cc43576483926946a501efff83866b0 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 263 1.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4449 6cc43576483926946a501efff83866b0 274 Gene3D G3DSA:1.10.3720.10 1 262 2.7E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu4449 6cc43576483926946a501efff83866b0 274 SUPERFAMILY SSF161098 7 274 4.97E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu3075 d2e54064a182e63765950f58d0d51e86 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3075 d2e54064a182e63765950f58d0d51e86 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.7E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3075 d2e54064a182e63765950f58d0d51e86 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 6.6E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3075 d2e54064a182e63765950f58d0d51e86 214 SUPERFAMILY SSF46689 6 78 7.7E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3075 d2e54064a182e63765950f58d0d51e86 214 SUPERFAMILY SSF48498 86 200 1.99E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu3075 d2e54064a182e63765950f58d0d51e86 214 Gene3D G3DSA:1.10.10.60 5 69 6.0E-27 T 14-10-2018 Atu3075 d2e54064a182e63765950f58d0d51e86 214 Gene3D G3DSA:1.10.357.10 70 205 9.5E-30 T 14-10-2018 Atu2590 bdaf4267f8e85aa630096464c8bff525 402 SUPERFAMILY SSF53756 116 387 1.16E-16 T 14-10-2018 Atu2590 bdaf4267f8e85aa630096464c8bff525 402 Gene3D G3DSA:3.40.50.2000 200 372 1.4E-18 T 14-10-2018 Atu2590 bdaf4267f8e85aa630096464c8bff525 402 PIRSF PIRSF017085 1 400 1.1E-170 T 14-10-2018 IPR016683 Glycosyl transferase, family 28, RedA, predicted Atu2590 bdaf4267f8e85aa630096464c8bff525 402 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 225 360 3.6E-9 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Atu0478 2b3fc6ee9259f1658b028c465a359cf1 515 SUPERFAMILY SSF53448 144 379 3.56E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0478 2b3fc6ee9259f1658b028c465a359cf1 515 Gene3D G3DSA:3.90.550.10 133 349 3.8E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0478 2b3fc6ee9259f1658b028c465a359cf1 515 Pfam PF13632 Glycosyl transferase family group 2 228 422 4.0E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Gene3D G3DSA:1.20.120.160 1 119 1.3E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SMART SM00387 445 586 2.9E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 504 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 5.2E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SUPERFAMILY SSF47384 338 401 1.53E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SUPERFAMILY SSF55874 404 584 3.67E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SMART SM01231 337 400 3.8E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Gene3D G3DSA:3.30.565.10 401 585 6.6E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SMART SM00260 578 719 3.0E-41 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SUPERFAMILY SSF47226 1 107 1.7E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SMART SM00073 1 80 1.5E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Gene3D G3DSA:2.40.50.180 609 674 1.1E-33 T 14-10-2018 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 SUPERFAMILY SSF50341 585 719 1.57E-26 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 448 585 2.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Gene3D G3DSA:1.10.287.560 337 400 9.4E-16 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Pfam PF01627 Hpt domain 8 75 1.0E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Gene3D G3DSA:2.30.30.40 586 715 1.1E-33 T 14-10-2018 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 338 400 8.7E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Atu0517 fe248b17b8f389af6d2f71fc3307912f 737 Pfam PF01584 CheW-like domain 591 721 4.4E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 Pfam PF00248 Aldo/keto reductase family 196 256 6.4E-7 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 Pfam PF00248 Aldo/keto reductase family 14 189 3.3E-44 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PIRSF PIRSF000097 2 111 1.2E-34 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PIRSF PIRSF000097 108 266 5.6E-33 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 Gene3D G3DSA:3.20.20.100 1 275 2.5E-107 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PRINTS PR00069 Aldo-keto reductase signature 191 215 5.6E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PRINTS PR00069 Aldo-keto reductase signature 89 107 5.6E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PRINTS PR00069 Aldo-keto reductase signature 33 57 5.6E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PRINTS PR00069 Aldo-keto reductase signature 120 137 5.6E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 PRINTS PR00069 Aldo-keto reductase signature 154 183 5.6E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Atu4294 78c9b76e4521fda25de03c830e38b1a2 277 SUPERFAMILY SSF51430 5 260 7.99E-86 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3969 0e95e886ed239588074882e1f996e78c 257 SUPERFAMILY SSF161098 37 256 6.8E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu3969 0e95e886ed239588074882e1f996e78c 257 Gene3D G3DSA:1.10.3720.10 19 248 6.9E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu3969 0e95e886ed239588074882e1f996e78c 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 250 8.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 Pfam PF07690 Major Facilitator Superfamily 9 400 2.5E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 SUPERFAMILY SSF103473 4 444 1.57E-56 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 99 119 1.3E-8 T 14-10-2018 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 8 32 1.3E-8 T 14-10-2018 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 391 410 1.3E-8 T 14-10-2018 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 154 178 1.3E-8 T 14-10-2018 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 129 153 1.3E-8 T 14-10-2018 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 Gene3D G3DSA:1.20.1720.10 6 245 1.1E-49 T 14-10-2018 Atu0621 f5ee8b43545a5ea680b75b6a4dbe4002 465 Gene3D G3DSA:1.20.1250.20 258 450 6.7E-13 T 14-10-2018 Atu1002 cd461e7b4faa304d36d72b1adfa56381 476 PIRSF PIRSF000521 10 469 8.4E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu1002 cd461e7b4faa304d36d72b1adfa56381 476 SUPERFAMILY SSF53383 34 467 1.69E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1002 cd461e7b4faa304d36d72b1adfa56381 476 Pfam PF00202 Aminotransferase class-III 54 464 5.6E-84 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu1002 cd461e7b4faa304d36d72b1adfa56381 476 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 276 313 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu1002 cd461e7b4faa304d36d72b1adfa56381 476 Gene3D G3DSA:3.40.640.10 88 363 1.5E-171 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1002 cd461e7b4faa304d36d72b1adfa56381 476 Gene3D G3DSA:3.90.1150.10 34 466 1.5E-171 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu0070 f6ff50d538e9e1789d913231f5345432 693 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 1 693 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu0070 f6ff50d538e9e1789d913231f5345432 693 Pfam PF08343 Ribonucleotide reductase N-terminal 1 76 6.6E-29 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu0070 f6ff50d538e9e1789d913231f5345432 693 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 82 675 9.3E-162 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 SUPERFAMILY SSF51998 154 677 4.58E-188 T 14-10-2018 Atu0070 f6ff50d538e9e1789d913231f5345432 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 361 372 1.0E-32 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 405 428 1.0E-32 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 556 583 1.0E-32 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 230 249 1.0E-32 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 472 495 1.0E-32 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 PRINTS PR01183 Ribonucleotide reductase large chain signature 444 466 1.0E-32 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 78 150 2.7E-12 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 Gene3D G3DSA:1.10.1650.20 273 324 2.1E-28 T 14-10-2018 Atu0070 f6ff50d538e9e1789d913231f5345432 693 SUPERFAMILY SSF48168 1 153 5.49E-58 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 545 567 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0070 f6ff50d538e9e1789d913231f5345432 693 Pfam PF02867 Ribonucleotide reductase, barrel domain 155 672 5.0E-145 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0707 c3f0b180c7d0362496459cca23441caf 201 SMART SM00421 137 194 9.6E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0707 c3f0b180c7d0362496459cca23441caf 201 SUPERFAMILY SSF46894 121 200 8.16E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0707 c3f0b180c7d0362496459cca23441caf 201 Gene3D G3DSA:1.10.10.10 135 200 4.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0707 c3f0b180c7d0362496459cca23441caf 201 Gene3D G3DSA:3.30.450.80 4 134 4.1E-7 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu0707 c3f0b180c7d0362496459cca23441caf 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0707 c3f0b180c7d0362496459cca23441caf 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0707 c3f0b180c7d0362496459cca23441caf 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0707 c3f0b180c7d0362496459cca23441caf 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0707 c3f0b180c7d0362496459cca23441caf 201 Pfam PF03472 Autoinducer binding domain 9 125 1.9E-13 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Atu0707 c3f0b180c7d0362496459cca23441caf 201 SUPERFAMILY SSF75516 14 131 5.36E-11 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu0707 c3f0b180c7d0362496459cca23441caf 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 194 1.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1533 1294c552d7891f411d89a502f792765c 148 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 6.0E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1533 1294c552d7891f411d89a502f792765c 148 Gene3D G3DSA:3.10.180.10 7 139 1.5E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1533 1294c552d7891f411d89a502f792765c 148 SUPERFAMILY SSF54593 5 139 2.28E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4215 e9c00f1693b20ea4c7b67d608c882ae4 148 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 125 3.4E-20 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4215 e9c00f1693b20ea4c7b67d608c882ae4 148 SUPERFAMILY SSF52490 16 125 1.7E-35 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atu4215 e9c00f1693b20ea4c7b67d608c882ae4 148 Gene3D G3DSA:3.40.50.1440 15 135 1.5E-37 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atu4215 e9c00f1693b20ea4c7b67d608c882ae4 148 SMART SM00864 18 145 1.7E-23 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu5172 c06410f7da2e24398fee2dd1e58c5fe8 336 Pfam PF00437 Type II/IV secretion system protein 16 316 7.7E-64 T 14-10-2018 IPR001482 Type II/IV secretion system protein Atu5172 c06410f7da2e24398fee2dd1e58c5fe8 336 Gene3D G3DSA:3.40.50.300 117 335 2.9E-59 T 14-10-2018 Atu5172 c06410f7da2e24398fee2dd1e58c5fe8 336 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 20 328 1.3E-134 T 14-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 Atu5172 c06410f7da2e24398fee2dd1e58c5fe8 336 Gene3D G3DSA:3.30.450.90 9 116 4.7E-36 T 14-10-2018 Atu5172 c06410f7da2e24398fee2dd1e58c5fe8 336 SUPERFAMILY SSF52540 14 316 3.51E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 SUPERFAMILY SSF56024 112 319 3.14E-42 T 14-10-2018 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 PIRSF PIRSF000850 313 379 0.36 T 14-10-2018 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 PIRSF PIRSF000850 113 190 0.052 T 14-10-2018 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 PIRSF PIRSF000850 378 448 0.0016 T 14-10-2018 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 Pfam PF13091 PLD-like domain 329 446 1.2E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 Pfam PF13091 PLD-like domain 137 267 1.2E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 SUPERFAMILY SSF56024 275 472 1.95E-41 T 14-10-2018 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 60 4.9E-5 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 Gene3D G3DSA:3.30.870.10 113 296 3.0E-37 T 14-10-2018 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 SMART SM00155 220 247 5.4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 SMART SM00155 399 426 4.5E-8 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atu2486 ac3452a008f13fd7488a577ad0d3e083 486 Gene3D G3DSA:3.30.870.10 303 483 2.8E-28 T 14-10-2018 Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 SUPERFAMILY SSF52540 344 590 4.07E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 SMART SM00382 379 565 2.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 Gene3D G3DSA:1.20.1560.10 3 341 1.2E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 Pfam PF00005 ABC transporter 371 519 3.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 Gene3D G3DSA:3.40.50.300 343 597 2.8E-92 T 14-10-2018 Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 SUPERFAMILY SSF90123 21 330 1.96E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4728 2697e88b13eeb6bfcc361cc8f4336f7a 600 Pfam PF00664 ABC transporter transmembrane region 32 306 1.0E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu5119 10440391b14b7f8b9858547dfe82b508 241 Gene3D G3DSA:3.40.50.2300 3 119 1.7E-6 T 14-10-2018 Atu5119 10440391b14b7f8b9858547dfe82b508 241 Gene3D G3DSA:1.10.10.10 130 237 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5119 10440391b14b7f8b9858547dfe82b508 241 SMART SM00862 159 234 1.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5119 10440391b14b7f8b9858547dfe82b508 241 SUPERFAMILY SSF52172 11 129 3.22E-10 T 14-10-2018 IPR011006 CheY-like superfamily Atu5119 10440391b14b7f8b9858547dfe82b508 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 233 2.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5119 10440391b14b7f8b9858547dfe82b508 241 SUPERFAMILY SSF46894 136 234 1.45E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 SUPERFAMILY SSF81935 30 199 5.62E-64 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 SUPERFAMILY SSF51730 200 549 1.77E-117 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 86 197 1.4E-45 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 541 1029 2.0E-213 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Pfam PF01619 Proline dehydrogenase 207 504 1.6E-97 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Gene3D G3DSA:3.20.20.220 158 541 6.1E-145 T 14-10-2018 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 PIRSF PIRSF000197 17 1228 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Gene3D G3DSA:3.40.605.10 583 1029 3.8E-136 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 833 844 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Gene3D G3DSA:3.20.20.220 30 127 1.4E-16 T 14-10-2018 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Gene3D G3DSA:3.40.309.10 808 1000 3.8E-136 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 SUPERFAMILY SSF53720 582 1029 1.7E-118 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4157 1ef3d143aebc3a28a7cd8031b2939172 1228 Pfam PF00171 Aldehyde dehydrogenase family 586 1029 3.2E-105 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4517 a5da33b9050a3a05e93f32c7ad8af3ac 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 312 4.8E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu3263 284e35bd0f183687282e469ec70924fe 398 SUPERFAMILY SSF53383 11 350 3.98E-40 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3263 284e35bd0f183687282e469ec70924fe 398 Gene3D G3DSA:3.40.640.10 24 273 2.5E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3263 284e35bd0f183687282e469ec70924fe 398 Pfam PF03841 L-seryl-tRNA selenium transferase 14 266 1.3E-12 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Atu0779 446c4e35b2e3973eaed2f14cc1263a5c 161 Gene3D G3DSA:3.40.30.10 1 161 2.6E-57 T 14-10-2018 Atu0779 446c4e35b2e3973eaed2f14cc1263a5c 161 SUPERFAMILY SSF52833 1 160 1.05E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0779 446c4e35b2e3973eaed2f14cc1263a5c 161 Pfam PF08534 Redoxin 5 157 7.2E-36 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atu0551 28bcf810d9bde180e4eb5726dcd2ee52 162 Gene3D G3DSA:2.30.30.760 103 162 4.8E-14 T 14-10-2018 Atu0551 28bcf810d9bde180e4eb5726dcd2ee52 162 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 33 160 5.5E-37 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Atu0551 28bcf810d9bde180e4eb5726dcd2ee52 162 Pfam PF13144 Chaperone for flagella basal body P-ring formation 39 159 1.1E-22 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Atu0551 28bcf810d9bde180e4eb5726dcd2ee52 162 SMART SM00858 36 98 1.5E-5 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu2437 dcff2fc682b3cf8cc61e8c6c395ebc65 175 Gene3D G3DSA:3.40.630.30 1 173 5.4E-32 T 14-10-2018 Atu2437 dcff2fc682b3cf8cc61e8c6c395ebc65 175 Pfam PF13302 Acetyltransferase (GNAT) domain 8 154 6.2E-15 T 14-10-2018 IPR000182 GNAT domain Atu2437 dcff2fc682b3cf8cc61e8c6c395ebc65 175 SUPERFAMILY SSF55729 1 158 2.28E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu6173 4c352f0fa0dbfbba223377c9e9692aca 55 ProDom PD019112 MEMBRANE PLASMID LIPOPROTEIN VIRB7 OUTER PALMITATE GALL PRECURSOR CROWN VIRULENCE 1 45 5.0E-12 T 14-10-2018 IPR035545 Outer membrane lipoprotein virB7 Atu6173 4c352f0fa0dbfbba223377c9e9692aca 55 Pfam PF17413 Outer membrane lipoprotein virB7 18 52 1.3E-23 T 14-10-2018 IPR035545 Outer membrane lipoprotein virB7 Atu0384 87509505d857c08ec27c9e7a500819e3 599 PRINTS PR01900 YidC translocation/secretion protein signature 511 526 2.5E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 PRINTS PR01900 YidC translocation/secretion protein signature 530 554 2.5E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 PRINTS PR01900 YidC translocation/secretion protein signature 363 379 2.5E-22 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 Pfam PF14849 YidC periplasmic domain 87 367 1.1E-76 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Atu0384 87509505d857c08ec27c9e7a500819e3 599 Gene3D G3DSA:2.70.98.90 83 357 2.3E-37 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily Atu0384 87509505d857c08ec27c9e7a500819e3 599 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 377 575 6.8E-69 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0384 87509505d857c08ec27c9e7a500819e3 599 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 376 5.8E-100 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal Atu0384 87509505d857c08ec27c9e7a500819e3 599 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 577 23.379 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 Pfam PF02096 60Kd inner membrane protein 378 575 2.4E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 PRINTS PR00701 60kDa inner membrane protein signature 439 462 2.5E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 PRINTS PR00701 60kDa inner membrane protein signature 348 368 2.5E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu0384 87509505d857c08ec27c9e7a500819e3 599 PRINTS PR00701 60kDa inner membrane protein signature 268 283 2.5E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Atu3181 816a1111d794ad412ea7f0fc51394ef2 400 Gene3D G3DSA:3.40.50.300 1 229 2.1E-71 T 14-10-2018 Atu3181 816a1111d794ad412ea7f0fc51394ef2 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 258 374 5.1E-26 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu3181 816a1111d794ad412ea7f0fc51394ef2 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 1.9E-54 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Atu3181 816a1111d794ad412ea7f0fc51394ef2 400 SUPERFAMILY SSF52540 2 313 1.24E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3181 816a1111d794ad412ea7f0fc51394ef2 400 SMART SM00833 258 374 1.3E-51 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 102 318 2.8E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 Gene3D G3DSA:2.40.30.170 90 330 3.5E-74 T 14-10-2018 Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 77 401 3.2E-104 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 Gene3D G3DSA:2.40.420.20 331 399 3.5E-74 T 14-10-2018 Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 Gene3D G3DSA:1.10.287.470 136 209 3.5E-74 T 14-10-2018 Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 SUPERFAMILY SSF111369 92 323 1.7E-44 T 14-10-2018 Atu3273 f12a374db1b87840a5a7d0b75d9245b1 425 Gene3D G3DSA:2.40.50.100 101 243 3.5E-74 T 14-10-2018 Atu2511 2361d525baeb96a105ef292a3836da2e 288 SUPERFAMILY SSF56752 8 281 9.68E-73 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Atu2511 2361d525baeb96a105ef292a3836da2e 288 Pfam PF01063 Amino-transferase class IV 35 258 1.5E-39 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Atu2511 2361d525baeb96a105ef292a3836da2e 288 Gene3D G3DSA:3.20.10.10 128 286 1.4E-47 T 14-10-2018 Atu2511 2361d525baeb96a105ef292a3836da2e 288 Gene3D G3DSA:3.30.470.10 1 122 2.8E-34 T 14-10-2018 Atu4531 adb961799a081cac993ead36645490f2 147 Gene3D G3DSA:3.40.50.9100 1 147 1.7E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu4531 adb961799a081cac993ead36645490f2 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 141 1.6E-57 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu4531 adb961799a081cac993ead36645490f2 147 SUPERFAMILY SSF52304 5 145 5.76E-60 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu4531 adb961799a081cac993ead36645490f2 147 Pfam PF01220 Dehydroquinase class II 5 139 1.7E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu4531 adb961799a081cac993ead36645490f2 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 141 5.0E-76 T 14-10-2018 Atu4531 adb961799a081cac993ead36645490f2 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 68.316 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu4531 adb961799a081cac993ead36645490f2 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu4531 adb961799a081cac993ead36645490f2 147 PIRSF PIRSF001399 1 146 2.2E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Atu1090 5917c094048f208b988dfa408928c04c 82 Pfam PF01084 Ribosomal protein S18 28 77 4.2E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 30 80 3.0E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 SUPERFAMILY SSF46911 10 81 1.44E-27 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 PRINTS PR00974 Ribosomal protein S18 family signature 69 79 4.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 PRINTS PR00974 Ribosomal protein S18 family signature 37 47 4.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 PRINTS PR00974 Ribosomal protein S18 family signature 47 54 4.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 PRINTS PR00974 Ribosomal protein S18 family signature 55 69 4.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 TIGRFAM TIGR00165 S18: ribosomal protein bS18 14 81 8.4E-30 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 ProSitePatterns PS00057 Ribosomal protein S18 signature. 30 53 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 Gene3D G3DSA:4.10.640.10 2 82 6.4E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1090 5917c094048f208b988dfa408928c04c 82 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 11 82 21.143 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 158 180 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 Gene3D G3DSA:3.40.190.10 91 171 5.4E-25 T 14-10-2018 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 Pfam PF00800 Prephenate dehydratase 8 184 4.1E-54 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 Gene3D G3DSA:3.30.70.260 194 278 4.2E-21 T 14-10-2018 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 Gene3D G3DSA:3.40.190.10 2 90 2.2E-29 T 14-10-2018 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 PIRSF PIRSF001500 4 280 4.5E-61 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 SUPERFAMILY SSF55021 177 277 1.15E-23 T 14-10-2018 Atu0099 a81147d66445a00fc2822b8ffb428fa0 287 SUPERFAMILY SSF53850 7 188 1.02E-61 T 14-10-2018 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 Pfam PF03466 LysR substrate binding domain 96 304 2.4E-19 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 SUPERFAMILY SSF53850 98 304 4.16E-19 T 14-10-2018 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 SUPERFAMILY SSF46785 10 91 6.98E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 6.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 Gene3D G3DSA:3.40.190.10 174 281 7.0E-8 T 14-10-2018 Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 Gene3D G3DSA:1.10.10.10 6 92 4.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2512 286bf2e8cd4913ef5b124ec698e42f0f 306 Gene3D G3DSA:3.40.190.10 100 282 7.0E-8 T 14-10-2018 Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 Pfam PF00005 ABC transporter 25 174 5.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 Pfam PF00005 ABC transporter 275 429 1.3E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 SUPERFAMILY SSF52540 9 232 4.07E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 Gene3D G3DSA:3.40.50.300 257 498 1.0E-38 T 14-10-2018 Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 SUPERFAMILY SSF52540 272 484 8.46E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 Gene3D G3DSA:3.40.50.300 2 254 4.4E-58 T 14-10-2018 Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 SMART SM00382 283 478 8.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 SMART SM00382 34 222 3.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2819 d242eb7bf7c13975a0d67f93fb586f73 505 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2043 0ba1924660eca2a16947a210d1892113 514 Pfam PF13180 PDZ domain 276 367 2.6E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu2043 0ba1924660eca2a16947a210d1892113 514 Pfam PF13180 PDZ domain 441 471 1.2E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu2043 0ba1924660eca2a16947a210d1892113 514 Gene3D G3DSA:2.30.42.10 414 488 3.5E-12 T 14-10-2018 Atu2043 0ba1924660eca2a16947a210d1892113 514 SMART SM00228 276 358 2.1E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu2043 0ba1924660eca2a16947a210d1892113 514 SMART SM00228 418 503 3.2E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu2043 0ba1924660eca2a16947a210d1892113 514 Gene3D G3DSA:2.40.10.120 40 270 9.1E-85 T 14-10-2018 Atu2043 0ba1924660eca2a16947a210d1892113 514 SUPERFAMILY SSF50156 234 359 5.39E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu2043 0ba1924660eca2a16947a210d1892113 514 Pfam PF13365 Trypsin-like peptidase domain 103 237 4.1E-34 T 14-10-2018 Atu2043 0ba1924660eca2a16947a210d1892113 514 SUPERFAMILY SSF50156 419 483 2.63E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu2043 0ba1924660eca2a16947a210d1892113 514 SUPERFAMILY SSF50494 38 268 5.59E-66 T 14-10-2018 IPR009003 Peptidase S1, PA clan Atu2043 0ba1924660eca2a16947a210d1892113 514 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 380 2.2E-133 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Atu2043 0ba1924660eca2a16947a210d1892113 514 Gene3D G3DSA:2.30.42.10 274 379 1.1E-26 T 14-10-2018 Atu2043 0ba1924660eca2a16947a210d1892113 514 PRINTS PR00834 HtrA/DegQ protease family signature 133 153 1.3E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu2043 0ba1924660eca2a16947a210d1892113 514 PRINTS PR00834 HtrA/DegQ protease family signature 316 328 1.3E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu2043 0ba1924660eca2a16947a210d1892113 514 PRINTS PR00834 HtrA/DegQ protease family signature 174 198 1.3E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu2043 0ba1924660eca2a16947a210d1892113 514 PRINTS PR00834 HtrA/DegQ protease family signature 230 247 1.3E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu2043 0ba1924660eca2a16947a210d1892113 514 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.3E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu2043 0ba1924660eca2a16947a210d1892113 514 PRINTS PR00834 HtrA/DegQ protease family signature 112 124 1.3E-54 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu6170 13ca012e227c259024bb451ee3cb9eb8 789 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 8 783 2.8E-262 T 14-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 Atu6170 13ca012e227c259024bb451ee3cb9eb8 789 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 173 375 6.3E-69 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Atu6170 13ca012e227c259024bb451ee3cb9eb8 789 SUPERFAMILY SSF52540 376 713 3.35E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6170 13ca012e227c259024bb451ee3cb9eb8 789 Gene3D G3DSA:3.40.50.300 564 750 2.0E-16 T 14-10-2018 Atu2400 3cc499a2b7bf1837a36bed26fb688936 221 TIGRFAM TIGR02117 chp_urease_rgn: conserved hypothetical protein 12 217 3.6E-98 T 14-10-2018 IPR011727 Conserved hypothetical protein CHP02117 Atu2400 3cc499a2b7bf1837a36bed26fb688936 221 Pfam PF09601 Protein of unknown function (DUF2459) 42 209 8.5E-50 T 14-10-2018 IPR011727 Conserved hypothetical protein CHP02117 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 Pfam PF00722 Glycosyl hydrolases family 16 268 456 5.3E-35 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 Gene3D G3DSA:2.60.120.200 213 462 4.1E-61 T 14-10-2018 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 PRINTS PR00313 NodO calcium binding signature 133 142 1.2E-9 T 14-10-2018 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 PRINTS PR00313 NodO calcium binding signature 31 42 1.2E-9 T 14-10-2018 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 PRINTS PR00313 NodO calcium binding signature 53 61 1.2E-9 T 14-10-2018 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 PRINTS PR00313 NodO calcium binding signature 124 132 1.2E-9 T 14-10-2018 Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 SUPERFAMILY SSF51120 10 218 2.62E-26 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 SUPERFAMILY SSF49899 212 462 3.56E-53 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Atu3564 6cb79bfad1c48d3334da466570bf61f5 465 Gene3D G3DSA:2.150.10.10 90 212 1.2E-22 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu1153 55d95c1c86482309f3204ef0cce19391 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 563 7.1E-91 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1153 55d95c1c86482309f3204ef0cce19391 595 Gene3D G3DSA:3.30.1360.30 278 425 8.3E-160 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Atu1153 55d95c1c86482309f3204ef0cce19391 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 590 28.947 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Atu1153 55d95c1c86482309f3204ef0cce19391 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 3.4E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1153 55d95c1c86482309f3204ef0cce19391 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 3.4E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1153 55d95c1c86482309f3204ef0cce19391 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 3.4E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1153 55d95c1c86482309f3204ef0cce19391 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 3.4E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1153 55d95c1c86482309f3204ef0cce19391 595 SUPERFAMILY SSF55261 295 425 2.62E-31 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Atu1153 55d95c1c86482309f3204ef0cce19391 595 Gene3D G3DSA:3.30.930.10 121 587 8.3E-160 T 14-10-2018 Atu1153 55d95c1c86482309f3204ef0cce19391 595 SUPERFAMILY SSF50249 4 107 1.26E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1153 55d95c1c86482309f3204ef0cce19391 595 Pfam PF01336 OB-fold nucleic acid binding domain 21 104 1.3E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Atu1153 55d95c1c86482309f3204ef0cce19391 595 SUPERFAMILY SSF55681 115 590 3.78E-93 T 14-10-2018 Atu1153 55d95c1c86482309f3204ef0cce19391 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 590 1.5E-181 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Atu1153 55d95c1c86482309f3204ef0cce19391 595 Gene3D G3DSA:2.40.50.140 1 106 3.3E-34 T 14-10-2018 Atu1153 55d95c1c86482309f3204ef0cce19391 595 Pfam PF02938 GAD domain 314 407 2.8E-10 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Atu3415 c98b33d382103447f29721f2aa16f5a8 311 SUPERFAMILY SSF53850 58 292 1.01E-42 T 14-10-2018 Atu3415 c98b33d382103447f29721f2aa16f5a8 311 Gene3D G3DSA:3.40.190.10 150 254 1.8E-41 T 14-10-2018 Atu3415 c98b33d382103447f29721f2aa16f5a8 311 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 64 291 6.3E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3415 c98b33d382103447f29721f2aa16f5a8 311 SMART SM00062 63 295 2.3E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3415 c98b33d382103447f29721f2aa16f5a8 311 Gene3D G3DSA:3.40.190.10 62 284 1.8E-41 T 14-10-2018 Atu5375 fde81155ecc24913015b11195a08e2c2 441 SUPERFAMILY SSF55785 128 236 9.13E-28 T 14-10-2018 IPR035965 PAS domain superfamily Atu5375 fde81155ecc24913015b11195a08e2c2 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 116 236 3.3E-31 T 14-10-2018 IPR000014 PAS domain Atu5375 fde81155ecc24913015b11195a08e2c2 441 Gene3D G3DSA:3.30.450.20 113 253 2.9E-32 T 14-10-2018 Atu5375 fde81155ecc24913015b11195a08e2c2 441 SMART SM00911 244 333 8.9E-16 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu5375 fde81155ecc24913015b11195a08e2c2 441 Pfam PF07536 HWE histidine kinase 244 332 2.9E-15 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu5375 fde81155ecc24913015b11195a08e2c2 441 SMART SM00091 117 183 2.0E-12 T 14-10-2018 IPR000014 PAS domain Atu5375 fde81155ecc24913015b11195a08e2c2 441 Pfam PF00989 PAS fold 118 228 1.6E-20 T 14-10-2018 IPR013767 PAS fold GO:0006355 Atu5375 fde81155ecc24913015b11195a08e2c2 441 SMART SM00086 189 231 9.4E-6 T 14-10-2018 IPR001610 PAC motif Atu2337 94b8232406a77a49c337212dddfaea12 298 Pfam PF00892 EamA-like transporter family 10 137 5.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2337 94b8232406a77a49c337212dddfaea12 298 Pfam PF00892 EamA-like transporter family 160 288 1.0E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2337 94b8232406a77a49c337212dddfaea12 298 SUPERFAMILY SSF103481 37 140 3.4E-13 T 14-10-2018 Atu2337 94b8232406a77a49c337212dddfaea12 298 SUPERFAMILY SSF103481 192 291 2.22E-12 T 14-10-2018 Atu2417 27251477c10ba92a4227a270f5412a49 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 SUPERFAMILY SSF51735 7 254 2.07E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2417 27251477c10ba92a4227a270f5412a49 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 253 5.4E-63 T 14-10-2018 Atu2417 27251477c10ba92a4227a270f5412a49 256 Gene3D G3DSA:3.40.50.720 2 255 7.2E-77 T 14-10-2018 Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 6.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 6.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2417 27251477c10ba92a4227a270f5412a49 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 6.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 SMART SM00934 6 222 8.0E-81 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 4 227 34.68 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 222 1.2E-62 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 SUPERFAMILY SSF51366 4 224 3.14E-66 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 222 2.0E-46 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 Gene3D G3DSA:3.20.20.70 1 227 1.4E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0298 d04bca63c1f658c5aac9d381b03170ed 235 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 PRINTS PR00050 Cold shock protein signature 41 59 1.7E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 PRINTS PR00050 Cold shock protein signature 5 20 1.7E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 PRINTS PR00050 Cold shock protein signature 26 35 1.7E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 SMART SM00357 4 70 1.7E-24 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 PIRSF PIRSF002599 1 71 5.1E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 14-10-2018 IPR019844 Cold-shock conserved site Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 Gene3D G3DSA:2.40.50.140 2 70 3.7E-26 T 14-10-2018 Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 SUPERFAMILY SSF50249 2 69 2.01E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu2200 adb673ffca9b07064d412d0911a7ce0b 71 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 3.0E-23 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 Gene3D G3DSA:2.40.50.140 4 149 1.0E-40 T 14-10-2018 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 493 1.7E-76 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 SUPERFAMILY SSF55681 155 494 5.18E-109 T 14-10-2018 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 5.3E-27 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 5.3E-27 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 208 224 5.3E-27 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 379 395 5.3E-27 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 192 202 5.3E-27 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 Gene3D G3DSA:3.30.930.10 150 493 3.4E-123 T 14-10-2018 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 496 8.1E-175 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 Pfam PF01336 OB-fold nucleic acid binding domain 64 139 1.8E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 SUPERFAMILY SSF50249 14 148 7.17E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4473 8d2b7bd282c99c2a7b11ea9fa5f7f19b 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 497 39.495 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Atu2788 3d7d9661acd13bc23ae8be8465f687b1 294 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 5 223 3.5E-40 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Atu2788 3d7d9661acd13bc23ae8be8465f687b1 294 PIRSF PIRSF015582 1 294 7.8E-73 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like Atu2788 3d7d9661acd13bc23ae8be8465f687b1 294 Gene3D G3DSA:3.20.20.60 1 294 7.1E-90 T 14-10-2018 Atu2788 3d7d9661acd13bc23ae8be8465f687b1 294 SUPERFAMILY SSF51621 2 233 8.03E-65 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu3454 8587f89f2d53ce733b0d8c3bf032f829 209 SUPERFAMILY SSF52266 2 207 1.68E-26 T 14-10-2018 Atu3454 8587f89f2d53ce733b0d8c3bf032f829 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 188 4.0E-17 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Atu3454 8587f89f2d53ce733b0d8c3bf032f829 209 Gene3D G3DSA:3.40.50.1110 2 209 2.9E-77 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Atu0979 e945bbb091ac474095e009e8a6e59260 469 Gene3D G3DSA:3.30.565.10 310 468 5.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0979 e945bbb091ac474095e009e8a6e59260 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0979 e945bbb091ac474095e009e8a6e59260 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 1.7E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0979 e945bbb091ac474095e009e8a6e59260 469 SMART SM00388 240 305 1.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0979 e945bbb091ac474095e009e8a6e59260 469 SUPERFAMILY SSF47384 224 306 3.92E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0979 e945bbb091ac474095e009e8a6e59260 469 SUPERFAMILY SSF55874 294 466 2.88E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0979 e945bbb091ac474095e009e8a6e59260 469 SMART SM00387 350 468 3.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0979 e945bbb091ac474095e009e8a6e59260 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 451 1.1E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0979 e945bbb091ac474095e009e8a6e59260 469 Pfam PF00672 HAMP domain 186 235 3.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0979 e945bbb091ac474095e009e8a6e59260 469 Gene3D G3DSA:1.10.287.130 190 305 1.2E-21 T 14-10-2018 Atu0979 e945bbb091ac474095e009e8a6e59260 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 305 1.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0979 e945bbb091ac474095e009e8a6e59260 469 SUPERFAMILY SSF158472 188 236 2.62E-7 T 14-10-2018 Atu0979 e945bbb091ac474095e009e8a6e59260 469 SMART SM00304 186 239 6.3E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 Gene3D G3DSA:3.40.50.300 1 256 1.1E-56 T 14-10-2018 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 Gene3D G3DSA:3.40.50.300 273 549 2.8E-50 T 14-10-2018 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 Pfam PF00005 ABC transporter 17 175 2.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 Pfam PF12848 ABC transporter 214 290 1.3E-24 T 14-10-2018 IPR032781 ABC-transporter extension domain Atu1118 ca9be76843886a208ecd2431b7057ad3 627 SMART SM00382 336 503 3.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1118 ca9be76843886a208ecd2431b7057ad3 627 SMART SM00382 26 220 6.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1118 ca9be76843886a208ecd2431b7057ad3 627 SUPERFAMILY SSF52540 2 237 4.75E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1118 ca9be76843886a208ecd2431b7057ad3 627 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 Pfam PF00005 ABC transporter 327 458 2.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1118 ca9be76843886a208ecd2431b7057ad3 627 SUPERFAMILY SSF52540 323 504 3.36E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.9E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 SUPERFAMILY SSF51735 12 253 8.26E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 6.9E-62 T 14-10-2018 Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 192 0.002 T 14-10-2018 Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4821 e1c1fe64c1ae1584242fd51659ebe007 259 Gene3D G3DSA:3.40.50.720 1 255 5.7E-71 T 14-10-2018 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Gene3D G3DSA:3.40.50.300 192 357 1.2E-53 T 14-10-2018 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Gene3D G3DSA:3.40.50.300 2 191 2.7E-53 T 14-10-2018 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 15 827 6.1E-304 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 SUPERFAMILY SSF52540 27 351 3.54E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Pfam PF08482 ATP-dependent helicase C-terminal 683 814 3.4E-46 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 SMART SM00487 13 198 9.7E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Pfam PF04408 Helicase associated domain (HA2) 402 489 1.7E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Gene3D G3DSA:1.20.120.1080 384 495 1.9E-11 T 14-10-2018 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Pfam PF00271 Helicase conserved C-terminal domain 220 339 1.3E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 SMART SM00847 400 490 7.2E-14 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 SMART SM00490 238 340 9.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 Pfam PF00270 DEAD/DEAH box helicase 28 172 2.9E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu0052 cf1d87d2b619474076f9a75211a56eb0 828 PIRSF PIRSF005496 10 828 0.0 T 14-10-2018 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 SUPERFAMILY SSF52540 160 547 1.78E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Gene3D G3DSA:3.40.50.300 349 546 7.2E-75 T 14-10-2018 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 848 3.2E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Gene3D G3DSA:1.10.1780.10 1 150 1.2E-27 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Gene3D G3DSA:3.40.50.300 159 348 3.6E-75 T 14-10-2018 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Gene3D G3DSA:1.10.8.60 768 871 1.6E-29 T 14-10-2018 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 SMART SM00382 199 345 5.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 SMART SM00382 599 757 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Gene3D G3DSA:3.40.50.300 552 766 1.9E-87 T 14-10-2018 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 7 857 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 SUPERFAMILY SSF81923 4 156 5.49E-37 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 762 3.9E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 SUPERFAMILY SSF52540 548 848 4.13E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 6.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 6.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 6.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 6.2E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 334 3.4E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 4.4E-10 T 14-10-2018 IPR004176 Clp, N-terminal Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 9.4E-13 T 14-10-2018 IPR004176 Clp, N-terminal Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 SMART SM01086 768 857 6.5E-39 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu4177 7ed5459021d33cb58d96d3d2bf924ce5 874 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 Gene3D G3DSA:3.40.800.10 16 323 1.5E-84 T 14-10-2018 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 PRINTS PR00116 Arginase signature 274 288 5.2E-48 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 PRINTS PR00116 Arginase signature 138 165 5.2E-48 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 PRINTS PR00116 Arginase signature 111 126 5.2E-48 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 PRINTS PR00116 Arginase signature 239 268 5.2E-48 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 PRINTS PR00116 Arginase signature 190 208 5.2E-48 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 SUPERFAMILY SSF52768 21 319 2.7E-83 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 ProSitePatterns PS01053 Arginase family signature. 242 263 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 TIGRFAM TIGR01229 rocF_arginase: arginase 23 315 1.5E-90 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 Pfam PF00491 Arginase family 21 312 5.7E-68 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu6018 bcd34e21b388242068c8a1ec7080bc09 324 PIRSF PIRSF036979 5 316 1.2E-29 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu2286 2f3a3794cfb567bbd27d3c23b51a52f5 173 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 5 163 1.6E-50 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria Atu2286 2f3a3794cfb567bbd27d3c23b51a52f5 173 Pfam PF03350 Uncharacterized protein family, UPF0114 12 126 3.5E-27 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 Atu2286 2f3a3794cfb567bbd27d3c23b51a52f5 173 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 167 75.217 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 SUPERFAMILY SSF46785 4 77 1.07E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 SMART SM00345 14 73 6.0E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 Pfam PF07702 UTRA domain 97 224 3.7E-20 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 Gene3D G3DSA:3.40.1410.10 84 232 1.2E-15 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 Gene3D G3DSA:1.10.10.10 4 75 4.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 SMART SM00866 92 228 1.4E-12 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 SUPERFAMILY SSF64288 61 233 4.24E-25 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu3280 7e02998ef8f5e0ae8171ab78a4827a9e 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 412 5.6E-38 T 14-10-2018 IPR000160 GGDEF domain Atu1060 adcb68ab31e67b978b9992844c9afd42 430 SUPERFAMILY SSF52172 123 258 6.69E-33 T 14-10-2018 IPR011006 CheY-like superfamily Atu1060 adcb68ab31e67b978b9992844c9afd42 430 SUPERFAMILY SSF55073 260 414 9.42E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu1060 adcb68ab31e67b978b9992844c9afd42 430 Gene3D G3DSA:3.40.50.2300 1 122 8.2E-16 T 14-10-2018 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 414 1.4E-40 T 14-10-2018 IPR000160 GGDEF domain Atu1060 adcb68ab31e67b978b9992844c9afd42 430 SUPERFAMILY SSF52172 4 120 5.83E-15 T 14-10-2018 IPR011006 CheY-like superfamily Atu1060 adcb68ab31e67b978b9992844c9afd42 430 SMART SM00267 244 416 5.7E-50 T 14-10-2018 IPR000160 GGDEF domain Atu1060 adcb68ab31e67b978b9992844c9afd42 430 SMART SM00448 124 238 6.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 SMART SM00448 3 112 1.4E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 Gene3D G3DSA:3.40.50.2300 123 253 1.1E-31 T 14-10-2018 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 Gene3D G3DSA:3.30.70.270 254 418 2.7E-50 T 14-10-2018 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 Pfam PF00072 Response regulator receiver domain 126 238 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1060 adcb68ab31e67b978b9992844c9afd42 430 Pfam PF00072 Response regulator receiver domain 5 105 2.6E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5488 5e1d895bf0bfe8d98c3ab2e6315c5047 254 SUPERFAMILY SSF51206 13 129 1.96E-11 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu5488 5e1d895bf0bfe8d98c3ab2e6315c5047 254 Gene3D G3DSA:1.10.10.10 147 219 9.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5488 5e1d895bf0bfe8d98c3ab2e6315c5047 254 Pfam PF13545 Crp-like helix-turn-helix domain 152 217 1.6E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu5488 5e1d895bf0bfe8d98c3ab2e6315c5047 254 SUPERFAMILY SSF46785 149 221 1.11E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5488 5e1d895bf0bfe8d98c3ab2e6315c5047 254 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 6.9E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu5488 5e1d895bf0bfe8d98c3ab2e6315c5047 254 Gene3D G3DSA:2.60.120.10 10 142 4.0E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 SMART SM00342 172 255 1.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 Gene3D G3DSA:1.10.10.60 153 259 1.0E-22 T 14-10-2018 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 SUPERFAMILY SSF46689 207 255 7.47E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 Pfam PF02311 AraC-like ligand binding domain 21 125 7.2E-10 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 3.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 3.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 251 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu3995 2ecfe083decd9efc4d4e2a8759e51cc9 262 Pfam PF12833 Helix-turn-helix domain 178 255 1.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu2740 6790e051d493d24b358594d02da7b04c 238 Gene3D G3DSA:1.10.10.10 6 84 2.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2740 6790e051d493d24b358594d02da7b04c 238 SUPERFAMILY SSF46785 10 81 5.93E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2740 6790e051d493d24b358594d02da7b04c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2740 6790e051d493d24b358594d02da7b04c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2740 6790e051d493d24b358594d02da7b04c 238 Pfam PF07729 FCD domain 101 224 1.3E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu2740 6790e051d493d24b358594d02da7b04c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 8.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2740 6790e051d493d24b358594d02da7b04c 238 SMART SM00345 18 77 3.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2740 6790e051d493d24b358594d02da7b04c 238 SUPERFAMILY SSF48008 96 231 3.4E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2740 6790e051d493d24b358594d02da7b04c 238 Gene3D G3DSA:1.20.120.530 85 234 5.3E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2740 6790e051d493d24b358594d02da7b04c 238 SMART SM00895 101 226 7.4E-20 T 14-10-2018 IPR011711 GntR, C-terminal Atu6034 77a89179db514ae7eefc6949ab763051 220 SUPERFAMILY SSF54427 84 218 8.32E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu6034 77a89179db514ae7eefc6949ab763051 220 Pfam PF04335 VirB8 protein 14 218 5.6E-47 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Atu6034 77a89179db514ae7eefc6949ab763051 220 Gene3D G3DSA:3.10.450.230 84 213 2.0E-5 T 14-10-2018 Atu3531 41ad9aca684a01de7e970e73f5331c03 246 SUPERFAMILY SSF51735 1 243 3.25E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3531 41ad9aca684a01de7e970e73f5331c03 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 5.8E-55 T 14-10-2018 Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3531 41ad9aca684a01de7e970e73f5331c03 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 0.0049 T 14-10-2018 Atu3531 41ad9aca684a01de7e970e73f5331c03 246 Gene3D G3DSA:3.40.50.720 1 245 1.1E-75 T 14-10-2018 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 SMART SM00870 9 308 2.3E-80 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 Gene3D G3DSA:3.40.50.40 196 312 1.8E-29 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 Pfam PF00710 Asparaginase, N-terminal 10 178 9.8E-44 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 PRINTS PR00139 Asparaginase/glutaminase family signature 243 261 3.2E-14 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 3.2E-14 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 PRINTS PR00139 Asparaginase/glutaminase family signature 10 21 3.2E-14 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 12 20 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 SUPERFAMILY SSF53774 9 312 3.4E-73 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 Gene3D G3DSA:3.40.50.1170 5 194 1.2E-48 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 PIRSF PIRSF001220 4 317 3.0E-82 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Atu3791 a4ce4d0d7046a7946bcb5da7110e073c 317 PIRSF PIRSF500176 6 317 8.0E-87 T 14-10-2018 Atu3536 45d2ba0e19881f3233352f1327161d8f 513 Pfam PF00005 ABC transporter 22 171 7.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3536 45d2ba0e19881f3233352f1327161d8f 513 Pfam PF00005 ABC transporter 275 429 5.1E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3536 45d2ba0e19881f3233352f1327161d8f 513 SUPERFAMILY SSF52540 261 491 2.67E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3536 45d2ba0e19881f3233352f1327161d8f 513 Gene3D G3DSA:3.40.50.300 1 241 4.3E-59 T 14-10-2018 Atu3536 45d2ba0e19881f3233352f1327161d8f 513 Gene3D G3DSA:3.40.50.300 262 512 3.4E-42 T 14-10-2018 Atu3536 45d2ba0e19881f3233352f1327161d8f 513 SMART SM00382 282 478 8.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3536 45d2ba0e19881f3233352f1327161d8f 513 SMART SM00382 31 220 4.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3536 45d2ba0e19881f3233352f1327161d8f 513 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3536 45d2ba0e19881f3233352f1327161d8f 513 SUPERFAMILY SSF52540 5 226 2.45E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3655 d82a338faa79f27f2473cfd1679c22aa 188 Pfam PF08534 Redoxin 21 175 3.9E-30 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atu3655 d82a338faa79f27f2473cfd1679c22aa 188 SUPERFAMILY SSF52833 20 180 1.3E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3655 d82a338faa79f27f2473cfd1679c22aa 188 Gene3D G3DSA:3.40.30.10 24 181 4.3E-25 T 14-10-2018 Atu0095 33a110e0d2f78b3707aa789737aa9b59 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 2.6E-31 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atu0095 33a110e0d2f78b3707aa789737aa9b59 107 PIRSF PIRSF004555 1 107 4.0E-34 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atu0095 33a110e0d2f78b3707aa789737aa9b59 107 Gene3D G3DSA:3.30.1310.10 1 107 7.2E-38 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Atu0095 33a110e0d2f78b3707aa789737aa9b59 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 2.9E-25 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atu0095 33a110e0d2f78b3707aa789737aa9b59 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.855 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Atu0095 33a110e0d2f78b3707aa789737aa9b59 107 SUPERFAMILY SSF82607 8 101 9.42E-31 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Atu2207 8817addb9833eea84dc1b30e6166aa98 459 SMART SM00388 256 314 1.1E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2207 8817addb9833eea84dc1b30e6166aa98 459 Gene3D G3DSA:1.10.287.130 207 315 9.2E-17 T 14-10-2018 Atu2207 8817addb9833eea84dc1b30e6166aa98 459 SUPERFAMILY SSF47384 242 312 1.31E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu2207 8817addb9833eea84dc1b30e6166aa98 459 Gene3D G3DSA:3.30.565.10 320 459 1.3E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2207 8817addb9833eea84dc1b30e6166aa98 459 SMART SM00387 352 459 8.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2207 8817addb9833eea84dc1b30e6166aa98 459 SUPERFAMILY SSF55874 315 458 2.36E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2207 8817addb9833eea84dc1b30e6166aa98 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2207 8817addb9833eea84dc1b30e6166aa98 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2207 8817addb9833eea84dc1b30e6166aa98 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 5.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2207 8817addb9833eea84dc1b30e6166aa98 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 458 5.7E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 Gene3D G3DSA:3.40.50.1820 29 689 7.1E-247 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 SUPERFAMILY SSF50993 6 427 1.73E-92 T 14-10-2018 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 SUPERFAMILY SSF53474 433 673 8.46E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 524 554 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 517 536 9.8E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 621 9.8E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 547 567 9.8E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 646 9.8E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 463 481 9.8E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 489 513 9.8E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 Gene3D G3DSA:2.130.10.120 89 421 7.1E-247 T 14-10-2018 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 Pfam PF00326 Prolyl oligopeptidase family 479 696 5.0E-68 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Atu0897 a55ae035e7581beb2ced0050af1e1df6 699 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 11 419 6.5E-86 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Atu1873 975e26443c4e278805cfce5e8a456201 887 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 706 3.3E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atu1873 975e26443c4e278805cfce5e8a456201 887 Gene3D G3DSA:3.30.930.10 2 241 5.7E-109 T 14-10-2018 Atu1873 975e26443c4e278805cfce5e8a456201 887 Gene3D G3DSA:2.40.30.130 446 550 8.6E-9 T 14-10-2018 Atu1873 975e26443c4e278805cfce5e8a456201 887 Gene3D G3DSA:3.10.310.40 776 886 3.4E-26 T 14-10-2018 Atu1873 975e26443c4e278805cfce5e8a456201 887 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 887 200.21 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 868 2.9E-293 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 Pfam PF02272 DHHA1 domain 743 884 6.3E-21 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Atu1873 975e26443c4e278805cfce5e8a456201 887 Pfam PF01411 tRNA synthetases class II (A) 6 556 4.0E-218 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 SUPERFAMILY SSF50447 453 552 6.36E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu1873 975e26443c4e278805cfce5e8a456201 887 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 7.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 7.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 7.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 7.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 7.0E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 Gene3D G3DSA:3.30.54.20 624 687 3.3E-48 T 14-10-2018 Atu1873 975e26443c4e278805cfce5e8a456201 887 SUPERFAMILY SSF55681 4 245 1.37E-109 T 14-10-2018 Atu1873 975e26443c4e278805cfce5e8a456201 887 SUPERFAMILY SSF55186 552 721 1.96E-50 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Atu1873 975e26443c4e278805cfce5e8a456201 887 SMART SM00863 653 706 4.2E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atu1873 975e26443c4e278805cfce5e8a456201 887 SUPERFAMILY SSF101353 246 461 6.93E-58 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Atu1873 975e26443c4e278805cfce5e8a456201 887 Gene3D G3DSA:3.30.980.10 563 707 3.3E-48 T 14-10-2018 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 355 5.2E-162 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 Gene3D G3DSA:2.40.50.100 280 353 1.4E-15 T 14-10-2018 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 Pfam PF03459 TOBE domain 295 355 5.3E-12 T 14-10-2018 IPR005116 Transport-associated OB, type 1 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 SUPERFAMILY SSF52540 9 230 1.49E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 Gene3D G3DSA:2.40.50.140 238 355 1.4E-15 T 14-10-2018 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 Gene3D G3DSA:3.40.50.300 2 236 6.5E-64 T 14-10-2018 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 Pfam PF00005 ABC transporter 22 160 1.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 SUPERFAMILY SSF50331 239 354 7.8E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu2563 a7d0c04ed092bb3a7dc57d5d13778500 358 SMART SM00382 23 210 7.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3503 90b4435d5ced905365d7cc6d3ced8713 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 269 1.0E-95 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 Atu3503 90b4435d5ced905365d7cc6d3ced8713 277 SUPERFAMILY SSF161098 15 266 8.22E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu3503 90b4435d5ced905365d7cc6d3ced8713 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 268 1.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3503 90b4435d5ced905365d7cc6d3ced8713 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 272 3.0E-122 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 Atu3503 90b4435d5ced905365d7cc6d3ced8713 277 Gene3D G3DSA:1.10.3720.10 13 274 5.3E-69 T 14-10-2018 IPR035906 MetI-like superfamily Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 Pfam PF05175 Methyltransferase small domain 110 200 4.9E-16 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 SUPERFAMILY SSF53335 15 287 1.36E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 Gene3D G3DSA:3.40.50.150 88 289 8.2E-55 T 14-10-2018 Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 285 3.9E-82 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 286 3.7E-61 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 9 289 44.835 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Atu4175 146d38c0887f5f4fa389c0b6fa16c394 289 Gene3D G3DSA:1.10.8.10 9 87 8.5E-20 T 14-10-2018 Atu2231 d69fe03c856b07e2f39fc71d54a58087 150 Pfam PF00583 Acetyltransferase (GNAT) family 21 138 1.1E-16 T 14-10-2018 IPR000182 GNAT domain Atu2231 d69fe03c856b07e2f39fc71d54a58087 150 SUPERFAMILY SSF55729 3 148 2.92E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2231 d69fe03c856b07e2f39fc71d54a58087 150 Gene3D G3DSA:3.40.630.30 1 150 2.3E-40 T 14-10-2018 Atu1455 592ddd44f06c0f0c6c6720a4e7a59714 104 Pfam PF11011 Protein of unknown function (DUF2849) 4 90 4.2E-28 T 14-10-2018 IPR021270 Protein of unknown function DUF2849 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 7 391 68.76 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 SUPERFAMILY SSF53383 9 387 2.18E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 Pfam PF00202 Aminotransferase class-III 17 386 1.9E-118 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 214 251 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 9 387 2.7E-138 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 Gene3D G3DSA:3.40.640.10 51 296 2.9E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 PIRSF PIRSF000521 159 391 1.9E-41 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 PIRSF PIRSF000521 10 149 1.4E-10 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu0428 a824c5c49ae6ca48c1ff62885cd2819f 399 Gene3D G3DSA:3.90.1150.10 16 381 2.9E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 31 374 7.1E-135 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 Gene3D G3DSA:3.40.50.11060 24 145 6.1E-34 T 14-10-2018 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 Gene3D G3DSA:3.40.50.300 206 378 2.9E-41 T 14-10-2018 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 PIRSF PIRSF006809 2 435 2.6E-145 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 275 293 9.6E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 208 228 9.6E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 Pfam PF16360 GTP-binding GTPase Middle Region 121 200 2.1E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 Hamap MF_00900 GTPase HflX [hflX]. 34 403 47.635 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 SUPERFAMILY SSF52540 206 377 6.2E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 Pfam PF01926 50S ribosome-binding GTPase 208 330 4.8E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu1451 979f291b6476b7e0fcf7254ee951f2fa 444 Pfam PF13167 GTP-binding GTPase N-terminal 31 118 6.4E-27 T 14-10-2018 IPR025121 GTPase HflX, N-terminal Atu4536 4541c74271e2fcfc64ec3bdeec6d8750 216 Gene3D G3DSA:1.10.3720.10 9 214 4.5E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu4536 4541c74271e2fcfc64ec3bdeec6d8750 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 106 1.1E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4536 4541c74271e2fcfc64ec3bdeec6d8750 216 SUPERFAMILY SSF161098 12 197 2.22E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu4536 4541c74271e2fcfc64ec3bdeec6d8750 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 211 4.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5094 26f7c11533e2abc369170aaf30a7abfd 517 Pfam PF01610 Transposase 157 282 1.5E-17 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atu5094 26f7c11533e2abc369170aaf30a7abfd 517 Pfam PF01610 Transposase 393 512 2.4E-7 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Atu5094 26f7c11533e2abc369170aaf30a7abfd 517 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 38 81 7.1E-9 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Atu4321 37ccd03ce0963afd92acfd843f145f07 500 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4321 37ccd03ce0963afd92acfd843f145f07 500 SUPERFAMILY SSF52540 272 484 1.18E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4321 37ccd03ce0963afd92acfd843f145f07 500 Gene3D G3DSA:3.40.50.300 1 236 1.4E-59 T 14-10-2018 Atu4321 37ccd03ce0963afd92acfd843f145f07 500 Gene3D G3DSA:3.40.50.300 256 497 9.2E-37 T 14-10-2018 Atu4321 37ccd03ce0963afd92acfd843f145f07 500 Pfam PF00005 ABC transporter 17 167 1.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4321 37ccd03ce0963afd92acfd843f145f07 500 SMART SM00382 26 214 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4321 37ccd03ce0963afd92acfd843f145f07 500 SMART SM00382 277 472 2.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4321 37ccd03ce0963afd92acfd843f145f07 500 Pfam PF00005 ABC transporter 272 423 1.4E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4321 37ccd03ce0963afd92acfd843f145f07 500 SUPERFAMILY SSF52540 2 226 1.33E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1989 09d93f48d3b17c8868f5511e0bcb6dc5 151 Pfam PF00072 Response regulator receiver domain 7 130 7.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1989 09d93f48d3b17c8868f5511e0bcb6dc5 151 SUPERFAMILY SSF52172 6 132 2.99E-30 T 14-10-2018 IPR011006 CheY-like superfamily Atu1989 09d93f48d3b17c8868f5511e0bcb6dc5 151 Gene3D G3DSA:3.40.50.2300 2 141 5.5E-35 T 14-10-2018 Atu1989 09d93f48d3b17c8868f5511e0bcb6dc5 151 SMART SM00448 5 129 2.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3314 89891b95b739448c472a04a2a29210f2 645 Gene3D G3DSA:3.90.550.10 101 320 5.9E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3314 89891b95b739448c472a04a2a29210f2 645 SUPERFAMILY SSF53448 113 374 1.59E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3314 89891b95b739448c472a04a2a29210f2 645 Pfam PF13506 Glycosyl transferase family 21 167 335 3.8E-28 T 14-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 Atu3198 257abb59de7191c85a4bacdcdd391ce5 317 Gene3D G3DSA:3.40.50.2300 137 310 1.7E-88 T 14-10-2018 Atu3198 257abb59de7191c85a4bacdcdd391ce5 317 Gene3D G3DSA:3.40.50.2300 30 298 1.7E-88 T 14-10-2018 Atu3198 257abb59de7191c85a4bacdcdd391ce5 317 SUPERFAMILY SSF53822 6 310 3.81E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3198 257abb59de7191c85a4bacdcdd391ce5 317 Pfam PF13407 Periplasmic binding protein domain 30 260 1.1E-41 T 14-10-2018 IPR025997 Periplasmic binding protein Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 4.2E-52 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:3.30.70.1440 674 871 2.6E-276 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:1.20.1640.10 507 1028 2.6E-276 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82866 808 1033 2.62E-48 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82693 138 312 5.75E-14 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82714 723 811 8.24E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:3.30.70.1430 553 673 2.6E-276 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82866 289 489 1.83E-42 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:3.30.70.1430 40 821 2.6E-276 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82714 182 265 1.83E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Pfam PF00873 AcrB/AcrD/AcrF family 4 1031 2.4E-227 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:1.20.1640.10 10 506 2.6E-276 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:3.30.70.1320 134 324 2.6E-276 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82693 551 618 2.09E-8 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:3.30.2090.10 178 268 2.6E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 SUPERFAMILY SSF82693 40 133 1.06E-19 T 14-10-2018 Atu2393 f533c5e7a1040196ae95e3dcbe1d4619 1106 Gene3D G3DSA:3.30.2090.10 722 813 2.6E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Pfam PF01515 Phosphate acetyl/butaryl transferase 439 757 1.6E-100 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Gene3D G3DSA:3.40.50.10750 581 733 2.7E-92 T 14-10-2018 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Gene3D G3DSA:3.40.50.10380 6 170 2.8E-65 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Gene3D G3DSA:3.40.50.10950 454 757 2.7E-92 T 14-10-2018 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 SMART SM00919 173 410 5.8E-139 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 PIRSF PIRSF036684 8 762 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Pfam PF03949 Malic enzyme, NAD binding domain 175 369 3.4E-24 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Gene3D G3DSA:3.40.50.720 171 453 4.2E-85 T 14-10-2018 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 SUPERFAMILY SSF53223 19 171 2.59E-52 T 14-10-2018 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 SMART SM01274 28 161 6.2E-80 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 Pfam PF00390 Malic enzyme, N-terminal domain 29 161 2.0E-26 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 SUPERFAMILY SSF51735 173 462 2.42E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 SUPERFAMILY SSF53659 440 760 9.87E-90 T 14-10-2018 Atu3356 a3e718be25ae16dfc186c2daf8ce32f6 762 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Atu1070 0f6c845bc3acb0cb04f657ee83f206d7 152 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 107 5.1E-16 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Atu1070 0f6c845bc3acb0cb04f657ee83f206d7 152 Gene3D G3DSA:2.170.150.70 6 114 8.5E-12 T 14-10-2018 Atu1070 0f6c845bc3acb0cb04f657ee83f206d7 152 SUPERFAMILY SSF51316 5 138 1.05E-35 T 14-10-2018 IPR011057 Mss4-like superfamily Atu0402 ce3f06b6c39a0be8c8795b9985e3ee25 321 Pfam PF05448 Acetyl xylan esterase (AXE1) 29 290 1.1E-18 T 14-10-2018 IPR008391 Acetyl xylan esterase Atu0402 ce3f06b6c39a0be8c8795b9985e3ee25 321 Gene3D G3DSA:3.40.50.1820 5 311 3.0E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0402 ce3f06b6c39a0be8c8795b9985e3ee25 321 SUPERFAMILY SSF53474 23 306 4.48E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 431 1.1E-74 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 Pfam PF01546 Peptidase family M20/M25/M40 98 272 1.5E-5 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 SUPERFAMILY SSF53187 7 449 4.81E-54 T 14-10-2018 Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 Gene3D G3DSA:3.30.70.360 186 303 8.5E-79 T 14-10-2018 Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 PIRSF PIRSF037227 2 480 7.6E-246 T 14-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 Gene3D G3DSA:3.40.630.10 23 325 8.5E-79 T 14-10-2018 Atu3374 fae63b88d84fd54cd330aa29d63ce008 480 SUPERFAMILY SSF55031 189 294 2.27E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 Pfam PF00571 CBS domain 219 271 0.0042 T 14-10-2018 IPR000644 CBS domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 Pfam PF00571 CBS domain 281 331 3.3E-6 T 14-10-2018 IPR000644 CBS domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 Gene3D G3DSA:3.30.465.10 339 424 3.8E-28 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 Gene3D G3DSA:3.10.580.10 192 338 1.6E-37 T 14-10-2018 Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 Pfam PF03471 Transporter associated domain 347 423 2.1E-20 T 14-10-2018 IPR005170 Transporter-associated domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 Pfam PF01595 Domain of unknown function DUF21 7 198 1.3E-44 T 14-10-2018 IPR002550 CNNM, transmembrane domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 SMART SM01091 346 425 8.3E-29 T 14-10-2018 IPR005170 Transporter-associated domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 SMART SM00116 222 271 3.7 T 14-10-2018 IPR000644 CBS domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 SMART SM00116 284 332 0.11 T 14-10-2018 IPR000644 CBS domain Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 SUPERFAMILY SSF54631 201 333 1.02E-25 T 14-10-2018 Atu3732 f5d3cbd6c6de47e740bbf1d11fa0fb6e 425 SUPERFAMILY SSF56176 345 423 2.04E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 Pfam PF00364 Biotin-requiring enzyme 4 77 3.6E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 Gene3D G3DSA:3.40.50.920 338 472 1.0E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 Pfam PF02780 Transketolase, C-terminal domain 341 463 3.4E-37 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 SUPERFAMILY SSF52518 152 340 1.03E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 Gene3D G3DSA:3.40.50.970 150 337 2.3E-87 T 14-10-2018 Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 SUPERFAMILY SSF52922 335 470 1.44E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 Gene3D G3DSA:2.40.50.100 2 104 1.3E-31 T 14-10-2018 Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 SMART SM00861 151 326 9.0E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 Pfam PF02779 Transketolase, pyrimidine binding domain 152 325 6.9E-51 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu1430 e3337cc86bd7e62bcdba579476845bcb 473 SUPERFAMILY SSF51230 1 96 5.23E-28 T 14-10-2018 IPR011053 Single hybrid motif Atu2443 db41ccc60b67a5769535b83c1579a69b 340 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 339 7.0E-88 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 Gene3D G3DSA:3.30.2350.10 93 340 6.6E-72 T 14-10-2018 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 Pfam PF00849 RNA pseudouridylate synthase 98 267 4.3E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 145 159 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 SUPERFAMILY SSF55174 21 111 2.52E-11 T 14-10-2018 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 Pfam PF01479 S4 domain 24 71 1.2E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 SMART SM00363 23 83 8.8E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 Gene3D G3DSA:3.10.290.10 12 92 2.8E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu2443 db41ccc60b67a5769535b83c1579a69b 340 SUPERFAMILY SSF55120 86 338 5.28E-70 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu3179 522bc77aeaa92f437795cbd24f77ef11 288 Pfam PF00950 ABC 3 transport family 11 270 4.9E-54 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Atu3179 522bc77aeaa92f437795cbd24f77ef11 288 SUPERFAMILY SSF81345 9 265 3.79E-23 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu1513 fd79a59e79073a91a0c55bc770139f43 973 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 7 945 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Gene3D G3DSA:3.40.50.300 9 616 2.2E-247 T 14-10-2018 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 SUPERFAMILY SSF52540 643 934 2.1E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1513 fd79a59e79073a91a0c55bc770139f43 973 ProSitePatterns PS00211 ABC transporters family signature. 851 865 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Gene3D G3DSA:3.30.190.20 133 242 2.2E-247 T 14-10-2018 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Gene3D G3DSA:3.40.50.300 639 957 5.5E-138 T 14-10-2018 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Gene3D G3DSA:1.10.8.280 308 423 2.2E-247 T 14-10-2018 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 SUPERFAMILY SSF52540 6 591 8.65E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Pfam PF00005 ABC transporter 829 881 5.3E-5 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 ProSitePatterns PS00211 ABC transporters family signature. 509 523 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Gene3D G3DSA:1.20.1580.10 93 514 2.2E-247 T 14-10-2018 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 592 607 1.8E-4 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Gene3D G3DSA:1.20.1580.10 713 851 5.5E-138 T 14-10-2018 Atu1513 fd79a59e79073a91a0c55bc770139f43 973 Hamap MF_00205 UvrABC system protein A [uvrA]. 4 961 22.668 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 Gene3D G3DSA:1.10.1740.10 2 72 1.6E-6 T 14-10-2018 Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 Gene3D G3DSA:1.10.10.10 86 167 1.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 163 4.8E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 Pfam PF08281 Sigma-70, region 4 107 156 9.7E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 SUPERFAMILY SSF88946 10 91 3.22E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 Pfam PF04542 Sigma-70 region 2 12 76 2.4E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu5309 4f2806dc6cfd8d220a8e44a129e467c1 169 SUPERFAMILY SSF88659 87 164 1.33E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 SUPERFAMILY SSF53167 25 501 7.86E-154 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 Gene3D G3DSA:3.40.50.1580 190 501 5.8E-101 T 14-10-2018 Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 29 184 2.0E-53 T 14-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 Gene3D G3DSA:3.30.1730.10 22 188 8.1E-50 T 14-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 Hamap MF_01932 AMP nucleosidase [amn]. 20 501 62.992 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 27 501 3.5E-245 T 14-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 Atu1006 d3bbe86a100f9cf9733ce48cb53fa84c 501 Pfam PF01048 Phosphorylase superfamily 286 448 1.8E-12 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atu4320 49c5a79842a5b3962a301247b8ddf5f6 303 Gene3D G3DSA:3.40.50.2300 126 297 3.4E-70 T 14-10-2018 Atu4320 49c5a79842a5b3962a301247b8ddf5f6 303 Pfam PF13407 Periplasmic binding protein domain 29 275 2.7E-51 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4320 49c5a79842a5b3962a301247b8ddf5f6 303 SUPERFAMILY SSF53822 7 301 8.7E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4320 49c5a79842a5b3962a301247b8ddf5f6 303 Gene3D G3DSA:3.40.50.2300 34 286 3.4E-70 T 14-10-2018 Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 SUPERFAMILY SSF52418 238 482 5.76E-40 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 Gene3D G3DSA:1.10.10.10 17 101 1.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 22 81 2.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 SUPERFAMILY SSF46785 21 100 4.99E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 SUPERFAMILY SSF47648 173 229 2.62E-12 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 Gene3D G3DSA:3.40.1030.10 256 486 7.0E-29 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 Gene3D G3DSA:1.20.970.10 171 230 1.2E-13 T 14-10-2018 Atu3917 ffcbd46e564cccb05ca13a58b177c48e 489 Pfam PF02885 Glycosyl transferase family, helical bundle domain 175 227 3.9E-11 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0257 d75ea7eb4f5deceeec5bc596d91f4467 292 SUPERFAMILY SSF56112 87 182 5.83E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu0257 d75ea7eb4f5deceeec5bc596d91f4467 292 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 89 198 2.3E-5 T 14-10-2018 Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 Gene3D G3DSA:2.40.50.940 223 351 2.5E-32 T 14-10-2018 Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 Pfam PF08402 TOBE domain 281 350 4.2E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 Pfam PF00005 ABC transporter 20 162 2.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 Gene3D G3DSA:3.40.50.300 4 222 1.6E-64 T 14-10-2018 Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 SUPERFAMILY SSF50331 237 356 5.83E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 SUPERFAMILY SSF52540 5 243 1.5E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 SMART SM00382 29 212 1.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4358 c5fa1cf81c0481bf2c2021e0a2d7347e 361 Gene3D G3DSA:2.40.50.140 288 342 2.5E-32 T 14-10-2018 Atu2186 b2fe585301518c788a8698eb5469fa29 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.3E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2186 b2fe585301518c788a8698eb5469fa29 300 SUPERFAMILY SSF46785 5 88 6.11E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2186 b2fe585301518c788a8698eb5469fa29 300 Gene3D G3DSA:1.10.10.10 5 94 4.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2186 b2fe585301518c788a8698eb5469fa29 300 SUPERFAMILY SSF53850 90 298 1.12E-41 T 14-10-2018 Atu2186 b2fe585301518c788a8698eb5469fa29 300 Pfam PF03466 LysR substrate binding domain 91 294 2.2E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2186 b2fe585301518c788a8698eb5469fa29 300 Gene3D G3DSA:3.40.190.290 95 295 3.1E-48 T 14-10-2018 Atu2186 b2fe585301518c788a8698eb5469fa29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2186 b2fe585301518c788a8698eb5469fa29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2186 b2fe585301518c788a8698eb5469fa29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu8205 3f15b8be24d92c9ac5c52e831c4a5778 148 SMART SM00287 24 87 8.7E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Atu8205 3f15b8be24d92c9ac5c52e831c4a5778 148 Gene3D G3DSA:2.30.30.40 27 84 1.3E-15 T 14-10-2018 Atu8205 3f15b8be24d92c9ac5c52e831c4a5778 148 Pfam PF08239 Bacterial SH3 domain 31 83 6.3E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Atu2495 3119cdde22dc5207d63706c979a9e94e 174 SMART SM00903 28 173 4.9E-56 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu2495 3119cdde22dc5207d63706c979a9e94e 174 Gene3D G3DSA:2.30.110.10 6 174 1.4E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu2495 3119cdde22dc5207d63706c979a9e94e 174 SUPERFAMILY SSF50475 23 174 3.39E-46 T 14-10-2018 Atu2495 3119cdde22dc5207d63706c979a9e94e 174 Pfam PF01613 Flavin reductase like domain 28 172 9.6E-33 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu2495 3119cdde22dc5207d63706c979a9e94e 174 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 20 174 1.3E-84 T 14-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 Atu2495 3119cdde22dc5207d63706c979a9e94e 174 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 16 174 41.171 T 14-10-2018 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 Atu3606 dc7fa00880801427c4fc9dcebcba6a0b 219 SUPERFAMILY SSF52540 1 215 3.9E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3606 dc7fa00880801427c4fc9dcebcba6a0b 219 SMART SM00382 27 216 1.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3606 dc7fa00880801427c4fc9dcebcba6a0b 219 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3606 dc7fa00880801427c4fc9dcebcba6a0b 219 Pfam PF00005 ABC transporter 18 165 5.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3606 dc7fa00880801427c4fc9dcebcba6a0b 219 Gene3D G3DSA:3.40.50.300 1 219 9.8E-59 T 14-10-2018 Atu3606 dc7fa00880801427c4fc9dcebcba6a0b 219 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.7E-85 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 Gene3D G3DSA:1.10.10.10 1 133 1.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 SUPERFAMILY SSF46785 4 132 1.92E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.8E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 Pfam PF12802 MarR family 29 86 3.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3193 aa2d3d34422785d02a7aac1754f04e9b 133 SMART SM00347 24 123 3.7E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Gene3D G3DSA:1.20.140.10 282 449 7.1E-94 T 14-10-2018 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Gene3D G3DSA:2.40.110.10 161 281 7.1E-94 T 14-10-2018 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 1.1E-11 T 14-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 1.6E-17 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 SUPERFAMILY SSF56645 37 279 2.49E-61 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Gene3D G3DSA:1.10.540.10 51 160 7.1E-94 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 2.2E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 SUPERFAMILY SSF47203 288 475 1.13E-46 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 1.7E-15 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu0501 a54400706fb48c7e1afcdfc05bcaba5c 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 467 593 6.4E-35 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Atu6042 5225d48c86b3431f1a3e4845094f469b 211 SUPERFAMILY SSF55729 11 202 3.31E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu6042 5225d48c86b3431f1a3e4845094f469b 211 ProSitePatterns PS00949 Autoinducer synthase family signature. 24 49 - T 14-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 20 39 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 3.9E-44 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 Pfam PF00765 Autoinducer synthase 9 192 3.7E-79 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Atu6042 5225d48c86b3431f1a3e4845094f469b 211 Gene3D G3DSA:3.40.630.30 3 195 2.5E-49 T 14-10-2018 Atu2405 99aae8bcdc6a2c6b02d47bb009e73905 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 4.9E-46 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2405 99aae8bcdc6a2c6b02d47bb009e73905 101 Gene3D G3DSA:2.10.150.10 1 101 1.2E-47 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2405 99aae8bcdc6a2c6b02d47bb009e73905 101 SUPERFAMILY SSF51278 1 101 2.75E-47 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2405 99aae8bcdc6a2c6b02d47bb009e73905 101 Pfam PF00699 Urease beta subunit 3 99 8.8E-47 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2405 99aae8bcdc6a2c6b02d47bb009e73905 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.662 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu4760 aec080d7dbe872af4570b385fb8701c9 482 Gene3D G3DSA:3.90.1150.10 368 450 1.0E-57 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu4760 aec080d7dbe872af4570b385fb8701c9 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 37 96 1.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4760 aec080d7dbe872af4570b385fb8701c9 482 SUPERFAMILY SSF53383 91 471 4.68E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4760 aec080d7dbe872af4570b385fb8701c9 482 Gene3D G3DSA:3.40.640.10 153 367 1.0E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu4760 aec080d7dbe872af4570b385fb8701c9 482 Gene3D G3DSA:1.10.10.10 24 97 6.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4760 aec080d7dbe872af4570b385fb8701c9 482 SUPERFAMILY SSF46785 29 102 2.99E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4760 aec080d7dbe872af4570b385fb8701c9 482 SMART SM00345 37 96 2.5E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4760 aec080d7dbe872af4570b385fb8701c9 482 Pfam PF00155 Aminotransferase class I and II 125 463 2.2E-19 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 38.5 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 4.7E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 4.7E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 4.7E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 4.7E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 4.7E-28 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 Gene3D G3DSA:3.30.930.10 107 427 2.4E-113 T 14-10-2018 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 SUPERFAMILY SSF46589 1 114 4.76E-28 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.2E-149 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 Gene3D G3DSA:1.10.287.40 1 106 9.8E-24 T 14-10-2018 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 400 4.4E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 PIRSF PIRSF001529 1 426 1.1E-160 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 SUPERFAMILY SSF55681 118 419 1.74E-93 T 14-10-2018 Atu1703 22600835cc9b3ed6af71e00c5e8be60d 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.7E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Atu3601 ac297db589d112097badce0a7f524837 422 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 1.4E-64 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 SUPERFAMILY SSF50621 256 418 1.21E-52 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 6.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 6.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 6.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 6.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 6.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 4.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 4.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 4.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu3601 ac297db589d112097badce0a7f524837 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 4.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu3601 ac297db589d112097badce0a7f524837 422 SUPERFAMILY SSF51419 26 284 1.44E-81 T 14-10-2018 IPR029066 PLP-binding barrel Atu3601 ac297db589d112097badce0a7f524837 422 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 373 2.0E-26 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Atu3601 ac297db589d112097badce0a7f524837 422 Gene3D G3DSA:3.20.20.10 34 277 6.8E-157 T 14-10-2018 IPR029066 PLP-binding barrel Atu3601 ac297db589d112097badce0a7f524837 422 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 415 3.3E-146 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu3601 ac297db589d112097badce0a7f524837 422 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 416 40.929 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu3601 ac297db589d112097badce0a7f524837 422 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Atu3601 ac297db589d112097badce0a7f524837 422 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Atu3601 ac297db589d112097badce0a7f524837 422 Gene3D G3DSA:2.40.37.10 16 412 6.8E-157 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 Gene3D G3DSA:1.10.730.10 342 513 3.0E-51 T 14-10-2018 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 6.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 6.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 6.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 6.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 6.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 6.6E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 SUPERFAMILY SSF52374 4 356 4.02E-109 T 14-10-2018 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 Pfam PF08264 Anticodon-binding domain of tRNA 387 474 1.3E-6 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 510 48.028 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 486 2.5E-153 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 Gene3D G3DSA:3.40.50.620 7 338 9.0E-154 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 Pfam PF09334 tRNA synthetases class I (M) 7 365 2.3E-113 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 SUPERFAMILY SSF47323 354 510 2.06E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1496 b2f3f8b3ef256f869b7250e445275cad 516 Gene3D G3DSA:2.170.220.10 118 230 9.0E-154 T 14-10-2018 Atu3060 af5984326b8fa60780776aae7062e69a 654 SUPERFAMILY SSF52540 419 617 5.92E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3060 af5984326b8fa60780776aae7062e69a 654 ProSitePatterns PS00211 ABC transporters family signature. 546 560 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3060 af5984326b8fa60780776aae7062e69a 654 Pfam PF06472 ABC transporter transmembrane region 2 83 346 1.2E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu3060 af5984326b8fa60780776aae7062e69a 654 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 452 465 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atu3060 af5984326b8fa60780776aae7062e69a 654 Gene3D G3DSA:3.40.50.300 397 625 7.8E-43 T 14-10-2018 Atu3060 af5984326b8fa60780776aae7062e69a 654 SMART SM00382 448 637 4.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3060 af5984326b8fa60780776aae7062e69a 654 SUPERFAMILY SSF90123 78 390 3.92E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3060 af5984326b8fa60780776aae7062e69a 654 Gene3D G3DSA:1.20.1560.10 179 396 1.8E-6 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3060 af5984326b8fa60780776aae7062e69a 654 Pfam PF00005 ABC transporter 440 574 5.8E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 SUPERFAMILY SSF56935 30 746 2.81E-94 T 14-10-2018 Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 Gene3D G3DSA:2.170.130.10 61 186 3.3E-19 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 Gene3D G3DSA:2.40.170.20 187 746 1.7E-109 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 Pfam PF00593 TonB dependent receptor 289 744 6.4E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 40 746 3.3E-114 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 171 2.8E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu2287 b47bf844a379492fa2a6fd5199e70a51 746 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 42 746 1.1E-124 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 Gene3D G3DSA:1.25.40.10 35 269 2.5E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 SMART SM00028 179 212 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 SMART SM00028 145 178 0.05 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 Pfam PF14559 Tetratricopeptide repeat 56 116 2.2E-6 T 14-10-2018 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 Pfam PF13414 TPR repeat 157 189 8.2E-7 T 14-10-2018 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 PIRSF PIRSF035836 1 274 1.1E-133 T 14-10-2018 IPR014596 Uncharacterised conserved protein UCP035836 Atu0215 205419338cb35de9d9424ec47d9d55fa 274 SUPERFAMILY SSF48452 54 241 6.7E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 SUPERFAMILY SSF53067 4 184 3.88E-67 T 14-10-2018 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 SUPERFAMILY SSF100934 502 602 8.37E-19 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Gene3D G3DSA:3.30.420.40 5 374 5.0E-168 T 14-10-2018 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Gene3D G3DSA:1.20.1270.10 519 600 4.3E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Gene3D G3DSA:2.60.34.10 378 518 1.7E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 4.8E-299 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Gene3D G3DSA:3.90.640.10 224 311 5.0E-168 T 14-10-2018 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 SUPERFAMILY SSF100920 379 535 3.79E-61 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Pfam PF00012 Hsp70 protein 4 601 4.5E-278 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Gene3D G3DSA:3.30.420.40 180 361 5.0E-168 T 14-10-2018 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 626 37.945 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 SUPERFAMILY SSF53067 186 377 8.43E-70 T 14-10-2018 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 360 380 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 138 158 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 329 345 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 197 207 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 383 402 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0122 41a87b8cb8e4f6555a5ba387f1bc04c6 633 PRINTS PR00301 70kDa heat shock protein signature 464 480 9.7E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu4653 3d8d557e838a7c451f5109e9763780ee 313 Gene3D G3DSA:1.10.3720.10 69 313 5.8E-69 T 14-10-2018 IPR035906 MetI-like superfamily Atu4653 3d8d557e838a7c451f5109e9763780ee 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 307 2.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4653 3d8d557e838a7c451f5109e9763780ee 313 SUPERFAMILY SSF161098 74 303 4.06E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu0665 6d90209ce3dedbe0a35dc1f92feff447 477 Gene3D G3DSA:3.30.465.40 19 239 4.7E-68 T 14-10-2018 Atu0665 6d90209ce3dedbe0a35dc1f92feff447 477 SUPERFAMILY SSF56176 19 231 1.64E-71 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu0665 6d90209ce3dedbe0a35dc1f92feff447 477 Gene3D G3DSA:3.30.70.2740 349 430 1.4E-7 T 14-10-2018 Atu0665 6d90209ce3dedbe0a35dc1f92feff447 477 Pfam PF01565 FAD binding domain 56 194 7.5E-40 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atu0665 6d90209ce3dedbe0a35dc1f92feff447 477 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 470 1.8E-57 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atu0665 6d90209ce3dedbe0a35dc1f92feff447 477 SUPERFAMILY SSF55103 234 472 2.13E-63 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atu4197 96e4ff76b0294f50ab7d34562c26b767 291 Gene3D G3DSA:2.70.98.10 4 290 2.0E-48 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atu4197 96e4ff76b0294f50ab7d34562c26b767 291 SUPERFAMILY SSF74650 9 287 6.28E-32 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu4197 96e4ff76b0294f50ab7d34562c26b767 291 Pfam PF01263 Aldose 1-epimerase 23 200 2.0E-20 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Atu0798 ed693e11469be150964ef60132855ed5 367 Gene3D G3DSA:3.90.79.10 235 357 4.7E-14 T 14-10-2018 Atu0798 ed693e11469be150964ef60132855ed5 367 SUPERFAMILY SSF55811 230 355 4.26E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu0798 ed693e11469be150964ef60132855ed5 367 Gene3D G3DSA:1.10.340.30 24 144 2.6E-82 T 14-10-2018 Atu0798 ed693e11469be150964ef60132855ed5 367 SUPERFAMILY SSF48150 11 232 2.67E-70 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atu0798 ed693e11469be150964ef60132855ed5 367 SMART SM00478 51 200 2.8E-47 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atu0798 ed693e11469be150964ef60132855ed5 367 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 166 6.0E-16 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atu0798 ed693e11469be150964ef60132855ed5 367 Pfam PF14815 NUDIX domain 245 353 4.6E-20 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu0798 ed693e11469be150964ef60132855ed5 367 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu0798 ed693e11469be150964ef60132855ed5 367 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 11 276 6.4E-92 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Atu0798 ed693e11469be150964ef60132855ed5 367 Gene3D G3DSA:1.10.1670.10 13 221 2.6E-82 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Atu2425 c22d8188465f6638c899620b814e4760 296 SUPERFAMILY SSF52540 20 277 5.43E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2425 c22d8188465f6638c899620b814e4760 296 SMART SM00382 46 255 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2425 c22d8188465f6638c899620b814e4760 296 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 255 277 4.0E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu2425 c22d8188465f6638c899620b814e4760 296 Pfam PF00005 ABC transporter 38 206 1.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2425 c22d8188465f6638c899620b814e4760 296 Gene3D G3DSA:3.40.50.300 4 283 5.5E-56 T 14-10-2018 Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 Pfam PF03466 LysR substrate binding domain 89 293 2.3E-42 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 Gene3D G3DSA:1.10.10.10 3 89 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 Gene3D G3DSA:3.40.190.10 163 264 2.5E-58 T 14-10-2018 Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 SUPERFAMILY SSF46785 4 86 1.28E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 SUPERFAMILY SSF53850 90 295 9.59E-45 T 14-10-2018 Atu3197 50da5c3cbd76e53c5427bec8c9531c64 297 Gene3D G3DSA:3.40.190.10 91 289 2.5E-58 T 14-10-2018 Atu0743 3830ecdb87cf21c94641b66f048f5759 264 Pfam PF13560 Helix-turn-helix domain 8 60 5.7E-10 T 14-10-2018 Atu0743 3830ecdb87cf21c94641b66f048f5759 264 SUPERFAMILY SSF47413 3 63 3.22E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu0743 3830ecdb87cf21c94641b66f048f5759 264 SMART SM00530 11 66 5.1E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0743 3830ecdb87cf21c94641b66f048f5759 264 Gene3D G3DSA:1.10.260.40 2 68 1.0E-12 T 14-10-2018 Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 SUPERFAMILY SSF52172 1 170 1.05E-39 T 14-10-2018 IPR011006 CheY-like superfamily Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 Gene3D G3DSA:3.40.50.2300 1 121 1.4E-37 T 14-10-2018 Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 SMART SM00862 145 218 1.1E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 5.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 SMART SM00448 1 112 1.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2466 4b05dcf1e8d2bc512dbc5e5ba94580c6 226 Gene3D G3DSA:1.10.10.10 123 224 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0945 78b7bfa2d1db3af705db3c4113ed768a 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 456 2.6E-120 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 Atu0945 78b7bfa2d1db3af705db3c4113ed768a 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 472 45.695 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 Atu5483 d1e13054846291a4461595317c0aa95c 332 Pfam PF07729 FCD domain 194 319 9.2E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu5483 d1e13054846291a4461595317c0aa95c 332 SUPERFAMILY SSF46785 43 108 1.27E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5483 d1e13054846291a4461595317c0aa95c 332 Gene3D G3DSA:1.10.10.10 117 184 4.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5483 d1e13054846291a4461595317c0aa95c 332 Pfam PF00392 Bacterial regulatory proteins, gntR family 45 103 1.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5483 d1e13054846291a4461595317c0aa95c 332 SUPERFAMILY SSF48008 192 324 1.91E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5483 d1e13054846291a4461595317c0aa95c 332 SMART SM00345 46 104 1.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5483 d1e13054846291a4461595317c0aa95c 332 SMART SM00345 126 182 0.016 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5483 d1e13054846291a4461595317c0aa95c 332 SMART SM00895 194 320 2.0E-10 T 14-10-2018 IPR011711 GntR, C-terminal Atu5483 d1e13054846291a4461595317c0aa95c 332 Gene3D G3DSA:1.10.10.10 19 105 3.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5483 d1e13054846291a4461595317c0aa95c 332 Gene3D G3DSA:1.20.120.530 188 329 3.2E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 Pfam PF01011 PQQ enzyme repeat 433 462 8.0E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 Pfam PF01011 PQQ enzyme repeat 706 743 2.6E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 Pfam PF13360 PQQ-like domain 217 385 1.4E-9 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 Gene3D G3DSA:2.140.10.10 558 775 9.4E-30 T 14-10-2018 Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 Gene3D G3DSA:2.140.10.10 159 555 1.1E-117 T 14-10-2018 Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 SUPERFAMILY SSF50998 161 778 1.31E-157 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 165 193 - T 14-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 SMART SM00564 700 733 0.11 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 SMART SM00564 399 452 440.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 SMART SM00564 333 374 2.3 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 SMART SM00564 217 249 8.6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 SMART SM00564 277 308 37.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu4135 7af37168c6ec4d7f19d10b0af9b1fc60 778 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 4 778 0.0 T 14-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 146 6.8E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 181 209 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 SUPERFAMILY SSF50129 8 174 9.75E-51 T 14-10-2018 IPR011032 GroES-like superfamily Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 SMART SM00829 12 344 2.4E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 Pfam PF00107 Zinc-binding dehydrogenase 188 310 1.9E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 Gene3D G3DSA:3.40.50.720 162 316 2.7E-138 T 14-10-2018 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 Gene3D G3DSA:3.90.180.10 14 344 2.7E-138 T 14-10-2018 Atu1557 8487da4f2821b84c1a6b27c5d51fce6f 355 SUPERFAMILY SSF51735 151 314 6.16E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3677 e692c8be4cb703699587496a505f168a 491 Gene3D G3DSA:3.90.1150.10 54 474 9.7E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3677 e692c8be4cb703699587496a505f168a 491 SUPERFAMILY SSF53383 33 480 9.05E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3677 e692c8be4cb703699587496a505f168a 491 Gene3D G3DSA:3.40.640.10 98 387 9.7E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3677 e692c8be4cb703699587496a505f168a 491 Pfam PF00202 Aminotransferase class-III 59 426 5.2E-44 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 267 1.4E-5 T 14-10-2018 IPR000014 PAS domain Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 Pfam PF00072 Response regulator receiver domain 431 537 4.8E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 SUPERFAMILY SSF52172 430 548 1.35E-29 T 14-10-2018 IPR011006 CheY-like superfamily Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 SUPERFAMILY SSF55785 136 264 5.76E-16 T 14-10-2018 IPR035965 PAS domain superfamily Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 Gene3D G3DSA:3.40.50.12740 429 554 4.6E-31 T 14-10-2018 Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 Gene3D G3DSA:3.30.450.20 136 264 1.0E-12 T 14-10-2018 Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 Pfam PF08448 PAS fold 160 266 2.0E-14 T 14-10-2018 IPR013656 PAS fold-4 Atu0700 74aa3e0fa0ade3cb89c9c48c52bb468d 555 SMART SM00448 429 541 1.6E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0960 3b0dd6e4e741c36352e457fa169fcf72 368 Gene3D G3DSA:1.20.1250.20 1 362 1.9E-29 T 14-10-2018 Atu0960 3b0dd6e4e741c36352e457fa169fcf72 368 Pfam PF07690 Major Facilitator Superfamily 5 234 5.6E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu0960 3b0dd6e4e741c36352e457fa169fcf72 368 SUPERFAMILY SSF103473 2 364 8.5E-33 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2338 21eb0b09b66d8dfed635ae11f544af4d 464 SUPERFAMILY SSF56059 9 455 2.4E-68 T 14-10-2018 Atu2338 21eb0b09b66d8dfed635ae11f544af4d 464 Gene3D G3DSA:3.40.50.11290 203 300 2.2E-39 T 14-10-2018 Atu2338 21eb0b09b66d8dfed635ae11f544af4d 464 Pfam PF14403 Circularly permuted ATP-grasp type 2 64 440 1.1E-161 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Atu2338 21eb0b09b66d8dfed635ae11f544af4d 464 PIRSF PIRSF005522 1 464 6.9E-221 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Atu2338 21eb0b09b66d8dfed635ae11f544af4d 464 Gene3D G3DSA:3.30.1490.270 337 397 3.6E-27 T 14-10-2018 Atu5522 3fcdc47bb9e9980dea90e7557b07c3b7 468 Gene3D G3DSA:3.40.50.2300 173 314 4.4E-72 T 14-10-2018 Atu5522 3fcdc47bb9e9980dea90e7557b07c3b7 468 Gene3D G3DSA:3.40.50.2300 64 383 4.4E-72 T 14-10-2018 Atu5522 3fcdc47bb9e9980dea90e7557b07c3b7 468 SUPERFAMILY SSF53822 64 428 7.85E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5522 3fcdc47bb9e9980dea90e7557b07c3b7 468 Pfam PF13458 Periplasmic binding protein 54 422 1.8E-77 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 9.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 9.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 Gene3D G3DSA:1.20.120.530 84 221 5.8E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 SMART SM00345 23 81 2.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 SMART SM00895 91 215 9.9E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 Gene3D G3DSA:1.10.10.10 8 82 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 Pfam PF07729 FCD domain 91 213 3.7E-20 T 14-10-2018 IPR011711 GntR, C-terminal Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 78 1.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 SUPERFAMILY SSF48008 87 218 1.1E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4232 a7e50e153053fbbe834fb4b0cb95426b 231 SUPERFAMILY SSF46785 16 107 1.3E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4278 a613b6fe78dc8326e52094b8fe9756d3 401 Pfam PF00155 Aminotransferase class I and II 32 393 3.2E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu4278 a613b6fe78dc8326e52094b8fe9756d3 401 Gene3D G3DSA:3.40.640.10 63 287 1.2E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu4278 a613b6fe78dc8326e52094b8fe9756d3 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Atu4278 a613b6fe78dc8326e52094b8fe9756d3 401 Gene3D G3DSA:3.90.1150.10 26 393 1.2E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu4278 a613b6fe78dc8326e52094b8fe9756d3 401 SUPERFAMILY SSF53383 1 399 5.03E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4614 13531ab4cdd4c83975f54233a2bd57d5 293 SUPERFAMILY SSF53448 9 250 8.61E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4614 13531ab4cdd4c83975f54233a2bd57d5 293 Pfam PF00535 Glycosyl transferase family 2 10 151 8.4E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4614 13531ab4cdd4c83975f54233a2bd57d5 293 Gene3D G3DSA:3.90.550.10 4 220 9.8E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 SUPERFAMILY SSF47384 228 302 1.96E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 SUPERFAMILY SSF55874 293 450 1.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 SMART SM00387 347 450 2.8E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 302 1.7E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 Gene3D G3DSA:1.10.287.130 195 304 4.4E-15 T 14-10-2018 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 Gene3D G3DSA:3.30.565.10 309 450 2.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 5.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 SMART SM00388 245 303 5.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3782 75bdfcaf95d2b9dcff25ce1f41888131 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 449 1.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu3826 64e048598f9928cf3d616c2b32e4f615 276 Gene3D G3DSA:3.10.129.10 7 142 3.5E-42 T 14-10-2018 Atu3826 64e048598f9928cf3d616c2b32e4f615 276 Pfam PF03061 Thioesterase superfamily 163 234 1.4E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atu3826 64e048598f9928cf3d616c2b32e4f615 276 Pfam PF03061 Thioesterase superfamily 31 103 1.4E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atu3826 64e048598f9928cf3d616c2b32e4f615 276 SUPERFAMILY SSF54637 18 137 7.89E-33 T 14-10-2018 IPR029069 HotDog domain superfamily Atu3826 64e048598f9928cf3d616c2b32e4f615 276 Gene3D G3DSA:3.10.129.10 143 276 2.2E-45 T 14-10-2018 Atu3826 64e048598f9928cf3d616c2b32e4f615 276 SUPERFAMILY SSF54637 144 264 8.75E-33 T 14-10-2018 IPR029069 HotDog domain superfamily Atu1158 0737e52e15bc285179ca70f8296c86b4 750 SUPERFAMILY SSF56719 38 487 5.36E-155 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 11 749 33.133 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 SMART SM00434 18 470 2.6E-225 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Gene3D G3DSA:3.90.199.10 39 487 7.1E-180 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Gene3D G3DSA:2.120.10.90 514 708 5.2E-18 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 611 647 3.8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 695 3.7E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 606 0.16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 39 470 7.5E-137 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Gene3D G3DSA:3.30.1360.40 244 340 7.1E-180 T 14-10-2018 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 Gene3D G3DSA:1.10.268.10 378 463 7.1E-180 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 17 747 4.7E-268 T 14-10-2018 Atu1158 0737e52e15bc285179ca70f8296c86b4 750 SUPERFAMILY SSF101904 512 747 4.97E-53 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 SUPERFAMILY SSF55307 210 321 1.51E-41 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 PRINTS PR00423 Cell division protein FtsZ signature 101 121 2.9E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 PRINTS PR00423 Cell division protein FtsZ signature 215 236 2.9E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 PRINTS PR00423 Cell division protein FtsZ signature 192 214 2.9E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 PRINTS PR00423 Cell division protein FtsZ signature 129 150 2.9E-48 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 Pfam PF12327 FtsZ family, C-terminal domain 225 320 9.2E-38 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 SMART SM00865 210 328 2.7E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 Gene3D G3DSA:3.40.50.1440 13 320 2.6E-116 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 SUPERFAMILY SSF52490 15 211 3.79E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 TIGRFAM TIGR03483 FtsZ_alphas_C: cell division protein FtsZ, alphaProteobacterial C-terminal extension 471 583 3.0E-38 T 14-10-2018 IPR017844 Cell division protein FtsZ, C-terminal extension GO:0005525|GO:0005737|GO:0051301 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 6.1E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 387 37.041 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 13 331 1.0E-119 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Atu2086 63d6f6a5544a3f42817887bc1cf0097e 583 SMART SM00864 16 208 2.1E-110 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu3893 9dabc8793a4728e25fc2613153d9d63e 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 293 2.4E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3893 9dabc8793a4728e25fc2613153d9d63e 304 SUPERFAMILY SSF161098 35 303 1.03E-59 T 14-10-2018 IPR035906 MetI-like superfamily Atu3893 9dabc8793a4728e25fc2613153d9d63e 304 Gene3D G3DSA:1.10.3720.10 32 297 8.8E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu5073 1eee5905b0d2e959fceedbf4d3b5ac11 321 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 44 307 1.4E-95 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Atu5073 1eee5905b0d2e959fceedbf4d3b5ac11 321 Gene3D G3DSA:3.40.718.10 1 313 1.6E-116 T 14-10-2018 Atu5073 1eee5905b0d2e959fceedbf4d3b5ac11 321 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 310 8.0E-103 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Atu5073 1eee5905b0d2e959fceedbf4d3b5ac11 321 SUPERFAMILY SSF53659 4 311 1.98E-97 T 14-10-2018 Atu4240 1e359b0e128b7b2b0439e0ce0b0ad0a1 346 Gene3D G3DSA:3.20.20.30 1 346 2.6E-77 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4240 1e359b0e128b7b2b0439e0ce0b0ad0a1 346 SUPERFAMILY SSF51679 1 344 2.36E-76 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4240 1e359b0e128b7b2b0439e0ce0b0ad0a1 346 Pfam PF00296 Luciferase-like monooxygenase 1 314 3.8E-50 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu2716 18ae1fb36594320c64b8892118a92c97 608 Gene3D G3DSA:3.40.50.300 247 519 4.2E-61 T 14-10-2018 Atu2716 18ae1fb36594320c64b8892118a92c97 608 Gene3D G3DSA:3.40.50.300 1 226 4.0E-52 T 14-10-2018 Atu2716 18ae1fb36594320c64b8892118a92c97 608 SUPERFAMILY SSF52540 3 194 1.72E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2716 18ae1fb36594320c64b8892118a92c97 608 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2716 18ae1fb36594320c64b8892118a92c97 608 Pfam PF00005 ABC transporter 21 148 7.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2716 18ae1fb36594320c64b8892118a92c97 608 Pfam PF16326 ABC transporter C-terminal domain 532 600 1.5E-16 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Atu2716 18ae1fb36594320c64b8892118a92c97 608 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2716 18ae1fb36594320c64b8892118a92c97 608 Pfam PF00005 ABC transporter 301 433 2.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2716 18ae1fb36594320c64b8892118a92c97 608 Gene3D G3DSA:1.10.287.380 523 605 3.4E-15 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Atu2716 18ae1fb36594320c64b8892118a92c97 608 SMART SM00382 30 193 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2716 18ae1fb36594320c64b8892118a92c97 608 SMART SM00382 307 478 5.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2716 18ae1fb36594320c64b8892118a92c97 608 SUPERFAMILY SSF52540 276 469 7.24E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0015 fb5970ce7ba790038d12b5e72e40c14b 398 PIRSF PIRSF020818 1 398 1.6E-199 T 14-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase Atu0015 fb5970ce7ba790038d12b5e72e40c14b 398 SUPERFAMILY SSF53474 86 392 9.42E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0015 fb5970ce7ba790038d12b5e72e40c14b 398 Pfam PF06850 PHB de-polymerase C-terminus 194 394 2.9E-103 T 14-10-2018 IPR009656 PHB de-polymerase, C-terminal Atu0015 fb5970ce7ba790038d12b5e72e40c14b 398 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 1 394 3.6E-194 T 14-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase Atu0159 3546af0c6d82855f287dd74dd9cca097 261 SUPERFAMILY SSF52540 5 234 1.06E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0159 3546af0c6d82855f287dd74dd9cca097 261 Pfam PF00005 ABC transporter 25 164 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0159 3546af0c6d82855f287dd74dd9cca097 261 SMART SM00382 34 215 3.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0159 3546af0c6d82855f287dd74dd9cca097 261 Gene3D G3DSA:3.40.50.300 4 258 1.4E-62 T 14-10-2018 Atu0315 08676580c05f264839124050eba30cf9 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 520 2.3E-190 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Atu0315 08676580c05f264839124050eba30cf9 527 Pfam PF03144 Elongation factor Tu domain 2 306 372 2.5E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 Gene3D G3DSA:3.40.50.300 109 267 6.9E-98 T 14-10-2018 Atu0315 08676580c05f264839124050eba30cf9 527 SUPERFAMILY SSF52540 9 269 1.28E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0315 08676580c05f264839124050eba30cf9 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 519 48.415 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Atu0315 08676580c05f264839124050eba30cf9 527 Gene3D G3DSA:3.30.70.3280 382 521 5.7E-43 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Atu0315 08676580c05f264839124050eba30cf9 527 PRINTS PR00315 GTP-binding elongation factor signature 64 72 5.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 PRINTS PR00315 GTP-binding elongation factor signature 136 145 5.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 PRINTS PR00315 GTP-binding elongation factor signature 84 94 5.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 PRINTS PR00315 GTP-binding elongation factor signature 100 111 5.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 Pfam PF00009 Elongation factor Tu GTP binding domain 12 269 2.1E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0315 08676580c05f264839124050eba30cf9 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 379 505 4.8E-40 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Atu0315 08676580c05f264839124050eba30cf9 527 Gene3D G3DSA:3.40.50.300 71 371 6.9E-98 T 14-10-2018 Atu0315 08676580c05f264839124050eba30cf9 527 SUPERFAMILY SSF50447 254 385 4.95E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu0315 08676580c05f264839124050eba30cf9 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu0315 08676580c05f264839124050eba30cf9 527 SUPERFAMILY SSF54980 385 456 1.15E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu0315 08676580c05f264839124050eba30cf9 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 184 4.9E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu6038 1380653405ff5e536e170f2df3b3f87c 822 Gene3D G3DSA:3.40.50.300 442 582 7.4E-7 T 14-10-2018 Atu6038 1380653405ff5e536e170f2df3b3f87c 822 SUPERFAMILY SSF52540 421 767 7.11E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6038 1380653405ff5e536e170f2df3b3f87c 822 SMART SM00382 455 714 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6038 1380653405ff5e536e170f2df3b3f87c 822 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 8 813 3.3E-227 T 14-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 Atu6038 1380653405ff5e536e170f2df3b3f87c 822 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 188 400 2.8E-60 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Atu6038 1380653405ff5e536e170f2df3b3f87c 822 Gene3D G3DSA:3.40.50.300 583 783 3.5E-22 T 14-10-2018 Atu4838 134ea151cfeb86314d95a2f54d468b84 176 Gene3D G3DSA:2.40.128.20 24 176 6.8E-23 T 14-10-2018 IPR012674 Calycin Atu4838 134ea151cfeb86314d95a2f54d468b84 176 PIRSF PIRSF036893 2 176 8.8E-37 T 14-10-2018 IPR022271 Lipocalin, ApoD type Atu4838 134ea151cfeb86314d95a2f54d468b84 176 Pfam PF08212 Lipocalin-like domain 33 175 5.3E-42 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Atu4838 134ea151cfeb86314d95a2f54d468b84 176 SUPERFAMILY SSF50814 27 175 1.41E-22 T 14-10-2018 IPR012674 Calycin Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 Gene3D G3DSA:1.10.8.450 243 275 8.5E-98 T 14-10-2018 Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 Pfam PF13379 NMT1-like family 29 257 7.2E-18 T 14-10-2018 Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 SMART SM00062 32 249 6.3E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 SUPERFAMILY SSF53850 31 257 3.01E-50 T 14-10-2018 Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 317 7.9E-74 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 Gene3D G3DSA:3.40.190.10 33 308 8.5E-98 T 14-10-2018 Atu1884 a1d726e718dbf7f4bc8aed31b3228533 321 Gene3D G3DSA:3.40.190.10 112 211 8.5E-98 T 14-10-2018 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 Pfam PF00216 Bacterial DNA-binding protein 1 75 1.6E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 SMART SM00411 2 75 1.4E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 Gene3D G3DSA:4.10.520.10 1 76 2.4E-23 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 PRINTS PR01727 Prokaryotic integration host factor signature 25 40 2.8E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 PRINTS PR01727 Prokaryotic integration host factor signature 43 56 2.8E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 PRINTS PR01727 Prokaryotic integration host factor signature 59 73 2.8E-9 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu5106 e948b739e93706ac8d63967298ff5cfb 76 SUPERFAMILY SSF47729 1 75 2.06E-20 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu0613 77c1c402449d62df7a39d720d105eb30 526 Gene3D G3DSA:1.10.3720.10 262 522 1.9E-35 T 14-10-2018 IPR035906 MetI-like superfamily Atu0613 77c1c402449d62df7a39d720d105eb30 526 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 235 2.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0613 77c1c402449d62df7a39d720d105eb30 526 SUPERFAMILY SSF161098 259 518 7.57E-37 T 14-10-2018 IPR035906 MetI-like superfamily Atu0613 77c1c402449d62df7a39d720d105eb30 526 SUPERFAMILY SSF161098 1 236 1.07E-35 T 14-10-2018 IPR035906 MetI-like superfamily Atu0613 77c1c402449d62df7a39d720d105eb30 526 Gene3D G3DSA:1.10.3720.10 1 245 6.8E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu1180 f3018f95422d6e22c64b546525b03e07 112 SUPERFAMILY SSF47729 6 94 4.71E-26 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 5.4E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 5.4E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 5.4E-12 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 SMART SM00411 6 95 3.8E-26 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 Gene3D G3DSA:4.10.520.10 4 103 2.3E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 5 97 1.8E-39 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Atu1180 f3018f95422d6e22c64b546525b03e07 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 Pfam PF00216 Bacterial DNA-binding protein 6 94 9.2E-26 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1180 f3018f95422d6e22c64b546525b03e07 112 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 4 100 28.025 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Atu2473 0c98f47f0a7f644f708ebf74ea763e39 312 SUPERFAMILY SSF53807 23 293 8.63E-60 T 14-10-2018 Atu2473 0c98f47f0a7f644f708ebf74ea763e39 312 Gene3D G3DSA:3.40.50.1980 40 298 3.3E-88 T 14-10-2018 Atu2473 0c98f47f0a7f644f708ebf74ea763e39 312 Gene3D G3DSA:3.40.50.12260 175 283 3.3E-88 T 14-10-2018 Atu2473 0c98f47f0a7f644f708ebf74ea763e39 312 Pfam PF01497 Periplasmic binding protein 55 284 1.6E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu3163 2301f42a7c2214f93f5d050c72b08913 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu3163 2301f42a7c2214f93f5d050c72b08913 336 Pfam PF16912 Glucose dehydrogenase C-terminus 138 323 5.8E-15 T 14-10-2018 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 Atu3163 2301f42a7c2214f93f5d050c72b08913 336 SUPERFAMILY SSF50129 1 173 3.62E-42 T 14-10-2018 IPR011032 GroES-like superfamily Atu3163 2301f42a7c2214f93f5d050c72b08913 336 Gene3D G3DSA:3.90.180.10 15 314 3.0E-81 T 14-10-2018 Atu3163 2301f42a7c2214f93f5d050c72b08913 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 129 4.9E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu3163 2301f42a7c2214f93f5d050c72b08913 336 SUPERFAMILY SSF51735 135 290 1.81E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3163 2301f42a7c2214f93f5d050c72b08913 336 Gene3D G3DSA:3.40.50.720 148 281 3.0E-81 T 14-10-2018 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 316 8.9E-46 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 Gene3D G3DSA:3.10.20.600 329 423 3.6E-20 T 14-10-2018 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 SUPERFAMILY SSF142019 97 337 9.29E-86 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 Gene3D G3DSA:3.40.50.11540 150 328 2.5E-72 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 508 9.3E-30 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 SUPERFAMILY SSF142984 341 421 2.22E-18 T 14-10-2018 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 SUPERFAMILY SSF140490 423 509 1.07E-27 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 SMART SM00928 426 471 3.5E-15 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 Gene3D G3DSA:1.20.1440.230 424 517 2.1E-23 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4707 5d43fffdf0901d7baf51bd14fa1b0faf 518 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0030 9636066265c12a11881eb87359ee94c6 91 Gene3D G3DSA:3.30.1340.10 5 90 2.6E-27 T 14-10-2018 IPR035895 HPr-like superfamily Atu0030 9636066265c12a11881eb87359ee94c6 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 83 1.4E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Atu0030 9636066265c12a11881eb87359ee94c6 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Atu0030 9636066265c12a11881eb87359ee94c6 91 PRINTS PR00107 Phosphocarrier protein signature 15 31 2.3E-9 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Atu0030 9636066265c12a11881eb87359ee94c6 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.3E-9 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Atu0030 9636066265c12a11881eb87359ee94c6 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.3E-9 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Atu0030 9636066265c12a11881eb87359ee94c6 91 SUPERFAMILY SSF55594 5 90 1.96E-26 T 14-10-2018 IPR035895 HPr-like superfamily Atu0030 9636066265c12a11881eb87359ee94c6 91 Pfam PF00381 PTS HPr component phosphorylation site 5 84 2.0E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 SMART SM00342 219 301 3.7E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 Gene3D G3DSA:1.10.10.60 198 307 1.3E-24 T 14-10-2018 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 Pfam PF12852 Cupin 3 187 5.6E-41 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 SUPERFAMILY SSF46689 255 303 1.61E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 Pfam PF12833 Helix-turn-helix domain 225 302 2.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 301 2.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 285 2.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 SUPERFAMILY SSF46689 204 253 1.34E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3227 5fb7df17c2468d3c10497c3c97226e90 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 256 297 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu0323 57ad607eaddf15b16cc41cc511e30199 88 SUPERFAMILY SSF46992 3 86 1.96E-27 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0323 57ad607eaddf15b16cc41cc511e30199 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 1.0E-35 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0323 57ad607eaddf15b16cc41cc511e30199 88 Gene3D G3DSA:1.20.58.110 1 87 1.6E-25 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0323 57ad607eaddf15b16cc41cc511e30199 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.444 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0323 57ad607eaddf15b16cc41cc511e30199 88 Pfam PF01649 Ribosomal protein S20 2 84 5.4E-24 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0323 57ad607eaddf15b16cc41cc511e30199 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 8.4E-21 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 515 549 1.0E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 279 3.4E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 Pfam PF00005 ABC transporter 307 464 2.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 Gene3D G3DSA:3.40.50.300 5 289 1.4E-83 T 14-10-2018 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 Gene3D G3DSA:3.40.50.300 290 566 4.4E-83 T 14-10-2018 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 SUPERFAMILY SSF52540 291 535 8.37E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 SUPERFAMILY SSF52540 7 263 1.78E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 Pfam PF00005 ABC transporter 28 192 5.7E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 SMART SM00382 36 242 2.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 SMART SM00382 316 513 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4195 7f56b017dbca6be57f87a5e9dd5ab30b 568 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 SUPERFAMILY SSF102886 13 303 1.26E-108 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 15 303 51.929 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 Pfam PF01218 Coproporphyrinogen III oxidase 23 302 4.0E-85 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PRINTS PR00073 Coprogen oxidase signature 71 92 8.5E-54 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PRINTS PR00073 Coprogen oxidase signature 53 69 8.5E-54 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PRINTS PR00073 Coprogen oxidase signature 184 213 8.5E-54 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PRINTS PR00073 Coprogen oxidase signature 260 287 8.5E-54 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PRINTS PR00073 Coprogen oxidase signature 113 137 8.5E-54 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PRINTS PR00073 Coprogen oxidase signature 288 303 8.5E-54 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 188 212 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 Gene3D G3DSA:3.40.1500.10 8 303 1.5E-96 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu2247 63bfc9f2b87bec900552bea51a6d4488 303 PIRSF PIRSF000166 2 303 1.2E-104 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 PIRSF PIRSF001365 1 300 7.9E-78 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 Gene3D G3DSA:3.20.20.70 1 295 3.8E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 6.0E-14 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 6.0E-14 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 6.0E-14 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 SMART SM01130 2 290 3.1E-85 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 2.9E-55 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu3960 acf70825dbf192a116eca4c4529eb3d2 303 SUPERFAMILY SSF51569 2 288 1.47E-80 T 14-10-2018 Atu1251 20f51bada9d6862c332d91f63efea80b 427 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu1251 20f51bada9d6862c332d91f63efea80b 427 PIRSF PIRSF001434 1 427 8.2E-123 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu1251 20f51bada9d6862c332d91f63efea80b 427 Gene3D G3DSA:3.40.640.10 5 289 2.5E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1251 20f51bada9d6862c332d91f63efea80b 427 Gene3D G3DSA:3.90.1150.10 293 427 6.5E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1251 20f51bada9d6862c332d91f63efea80b 427 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 8 424 2.0E-186 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Atu1251 20f51bada9d6862c332d91f63efea80b 427 SUPERFAMILY SSF53383 7 424 7.71E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1251 20f51bada9d6862c332d91f63efea80b 427 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 424 4.6E-136 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu0383 e14e43667a35613edcdef156ec5c85fe 217 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 24 215 26.34 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Atu0383 e14e43667a35613edcdef156ec5c85fe 217 Pfam PF01926 50S ribosome-binding GTPase 36 163 1.1E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu0383 e14e43667a35613edcdef156ec5c85fe 217 Gene3D G3DSA:3.40.50.300 14 216 1.5E-48 T 14-10-2018 Atu0383 e14e43667a35613edcdef156ec5c85fe 217 SUPERFAMILY SSF52540 30 213 1.14E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0383 e14e43667a35613edcdef156ec5c85fe 217 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 19 211 3.3E-59 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 SMART SM00464 12 204 3.3E-77 T 14-10-2018 IPR003111 Lon, substrate-binding domain Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Hamap MF_01973 Lon protease [lon]. 13 773 72.596 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 SUPERFAMILY SSF88697 14 203 1.79E-47 T 14-10-2018 IPR015947 PUA-like superfamily Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 571 773 2.7E-99 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Gene3D G3DSA:3.30.230.10 586 773 5.1E-80 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 490 1.1E-19 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Gene3D G3DSA:2.30.130.40 10 117 5.9E-32 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 596 612 3.1E-56 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 674 693 3.1E-56 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 745 3.1E-56 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 3.1E-56 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 704 723 3.1E-56 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 203 8.6E-42 T 14-10-2018 IPR003111 Lon, substrate-binding domain Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Gene3D G3DSA:1.20.58.1480 122 247 9.0E-45 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 SUPERFAMILY SSF54211 596 771 2.77E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Gene3D G3DSA:1.10.8.60 493 585 1.6E-29 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 SMART SM00382 350 494 3.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 PIRSF PIRSF001174 1 776 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 677 685 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 Gene3D G3DSA:3.40.50.300 315 492 3.9E-63 T 14-10-2018 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 TIGRFAM TIGR00763 lon: endopeptidase La 14 772 2.6E-302 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Atu1261 f84aff601c0ff6fb3618c61bbd1a8bc6 805 SUPERFAMILY SSF52540 318 586 2.31E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0983 f25c612b85e00f54bfddf1ccfd8e8ea8 106 Gene3D G3DSA:1.20.1290.10 2 106 1.7E-15 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0983 f25c612b85e00f54bfddf1ccfd8e8ea8 106 Pfam PF02627 Carboxymuconolactone decarboxylase family 19 96 2.1E-11 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu0983 f25c612b85e00f54bfddf1ccfd8e8ea8 106 SUPERFAMILY SSF69118 8 105 1.7E-16 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu4323 f1714a9b6392b21546ae2dab7807b929 243 SUPERFAMILY SSF51735 3 230 7.62E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4323 f1714a9b6392b21546ae2dab7807b929 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 5.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.3E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 Pfam PF00106 short chain dehydrogenase 8 196 8.2E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4323 f1714a9b6392b21546ae2dab7807b929 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4323 f1714a9b6392b21546ae2dab7807b929 243 Gene3D G3DSA:3.40.50.720 1 242 3.2E-65 T 14-10-2018 Atu1192 e594ffbbc03bc3c56cfa136a9763bd1e 155 Gene3D G3DSA:1.10.10.10 5 146 5.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1192 e594ffbbc03bc3c56cfa136a9763bd1e 155 SUPERFAMILY SSF46785 28 117 1.07E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1192 e594ffbbc03bc3c56cfa136a9763bd1e 155 Pfam PF12802 MarR family 29 71 8.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 6 165 4.5E-72 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Gene3D G3DSA:3.30.1490.70 264 432 3.2E-45 T 14-10-2018 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Pfam PF04679 ATP dependent DNA ligase C terminal region 450 544 1.8E-23 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 SUPERFAMILY SSF50249 441 550 4.28E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu5055 82374b109b071f7d01aab31fef1ceeef 884 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 263 863 1.5E-220 T 14-10-2018 IPR014143 DNA ligase D Atu5055 82374b109b071f7d01aab31fef1ceeef 884 SUPERFAMILY SSF56091 240 435 6.96E-47 T 14-10-2018 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Gene3D G3DSA:3.30.470.30 277 391 3.2E-45 T 14-10-2018 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Pfam PF01068 ATP dependent DNA ligase domain 266 434 1.1E-23 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 254 550 3.4E-103 T 14-10-2018 IPR014146 DNA ligase D, ligase domain Atu5055 82374b109b071f7d01aab31fef1ceeef 884 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 586 836 4.2E-92 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Gene3D G3DSA:3.90.920.30 599 879 2.5E-94 T 14-10-2018 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Gene3D G3DSA:2.40.50.140 438 552 3.1E-29 T 14-10-2018 Atu5055 82374b109b071f7d01aab31fef1ceeef 884 Pfam PF13298 DNA polymerase Ligase (LigD) 38 144 5.8E-39 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain Atu3223 23976646e5b376585130976ed1515a7d 507 SUPERFAMILY SSF52540 270 490 6.01E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3223 23976646e5b376585130976ed1515a7d 507 Pfam PF00005 ABC transporter 279 430 1.9E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3223 23976646e5b376585130976ed1515a7d 507 Pfam PF00005 ABC transporter 23 172 1.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3223 23976646e5b376585130976ed1515a7d 507 SMART SM00382 32 220 7.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3223 23976646e5b376585130976ed1515a7d 507 SMART SM00382 285 478 0.55 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3223 23976646e5b376585130976ed1515a7d 507 SUPERFAMILY SSF52540 6 230 1.2E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3223 23976646e5b376585130976ed1515a7d 507 Gene3D G3DSA:3.40.50.300 265 507 5.3E-43 T 14-10-2018 Atu3223 23976646e5b376585130976ed1515a7d 507 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3223 23976646e5b376585130976ed1515a7d 507 Gene3D G3DSA:3.40.50.300 2 237 1.1E-54 T 14-10-2018 Atu0935 de40dac24bfc9f48e7eca6f28f506cda 91 PIRSF PIRSF003108 1 90 3.5E-34 T 14-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 Atu0935 de40dac24bfc9f48e7eca6f28f506cda 91 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 86 1.1E-25 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Atu0935 de40dac24bfc9f48e7eca6f28f506cda 91 Gene3D G3DSA:1.10.1220.10 4 76 1.2E-15 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Atu0935 de40dac24bfc9f48e7eca6f28f506cda 91 Pfam PF04221 RelB antitoxin 4 70 2.3E-22 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Atu4363 4071fa64b2b858720cb164ecb376ad6f 344 SUPERFAMILY SSF51735 4 159 5.66E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4363 4071fa64b2b858720cb164ecb376ad6f 344 Gene3D G3DSA:3.30.360.10 139 342 6.9E-32 T 14-10-2018 Atu4363 4071fa64b2b858720cb164ecb376ad6f 344 SUPERFAMILY SSF55347 136 268 4.58E-23 T 14-10-2018 Atu4363 4071fa64b2b858720cb164ecb376ad6f 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 126 1.3E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu4363 4071fa64b2b858720cb164ecb376ad6f 344 Gene3D G3DSA:3.40.50.720 1 138 1.9E-26 T 14-10-2018 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 PIRSF PIRSF016578 2 193 1.8E-8 T 14-10-2018 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 PIRSF PIRSF016578 214 375 3.7E-11 T 14-10-2018 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 SUPERFAMILY SSF47203 225 375 8.05E-60 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 9.0E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 Gene3D G3DSA:1.10.540.10 1 118 4.4E-49 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 SUPERFAMILY SSF56645 2 240 7.2E-82 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 2.3E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 Gene3D G3DSA:1.20.140.10 233 375 1.6E-57 T 14-10-2018 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 3.0E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu3474 fca747c9135907162ee7c14b7e4edf25 375 Gene3D G3DSA:2.40.110.10 119 232 3.0E-39 T 14-10-2018 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 Gene3D G3DSA:3.40.190.10 93 258 3.3E-30 T 14-10-2018 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 Gene3D G3DSA:1.10.10.10 1 88 5.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 Gene3D G3DSA:3.40.190.10 159 251 3.3E-30 T 14-10-2018 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 Pfam PF03466 LysR substrate binding domain 89 275 2.1E-18 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 SUPERFAMILY SSF46785 3 82 2.96E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4004 fb30b61395c1fdd0c4e2fad2b43234e0 280 SUPERFAMILY SSF53850 89 275 3.8E-18 T 14-10-2018 Atu1303 f4c0518d863f181a3fee57354875972c 784 Hamap MF_01895 Ribonuclease R [rnr]. 56 748 50.899 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Atu1303 f4c0518d863f181a3fee57354875972c 784 SUPERFAMILY SSF50249 258 664 1.86E-127 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1303 f4c0518d863f181a3fee57354875972c 784 TIGRFAM TIGR02063 RNase_R: ribonuclease R 37 748 2.3E-210 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Atu1303 f4c0518d863f181a3fee57354875972c 784 SMART SM00955 288 619 2.2E-154 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Atu1303 f4c0518d863f181a3fee57354875972c 784 SUPERFAMILY SSF50249 665 747 6.0E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1303 f4c0518d863f181a3fee57354875972c 784 SMART SM00316 665 748 3.1E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu1303 f4c0518d863f181a3fee57354875972c 784 ProSitePatterns PS01175 Ribonuclease II family signature. 586 610 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site Atu1303 f4c0518d863f181a3fee57354875972c 784 Gene3D G3DSA:2.40.50.140 668 767 1.4E-11 T 14-10-2018 Atu1303 f4c0518d863f181a3fee57354875972c 784 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 151 735 1.8E-138 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Atu1303 f4c0518d863f181a3fee57354875972c 784 Pfam PF00575 S1 RNA binding domain 665 733 4.5E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu1303 f4c0518d863f181a3fee57354875972c 784 Pfam PF00773 RNB domain 288 613 3.7E-88 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Atu0184 82f2d66fcb2f3ae83e3d15bcb062ee79 340 Pfam PF02685 Glucokinase 15 324 1.5E-108 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Atu0184 82f2d66fcb2f3ae83e3d15bcb062ee79 340 Gene3D G3DSA:3.30.420.40 14 320 5.5E-92 T 14-10-2018 Atu0184 82f2d66fcb2f3ae83e3d15bcb062ee79 340 SUPERFAMILY SSF53067 17 325 8.39E-55 T 14-10-2018 Atu0184 82f2d66fcb2f3ae83e3d15bcb062ee79 340 Hamap MF_00524 Glucokinase [glk]. 13 326 31.151 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Atu0184 82f2d66fcb2f3ae83e3d15bcb062ee79 340 Gene3D G3DSA:3.40.367.20 110 309 5.5E-92 T 14-10-2018 Atu0184 82f2d66fcb2f3ae83e3d15bcb062ee79 340 TIGRFAM TIGR00749 glk: glucokinase 15 318 9.8E-71 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Atu1052 bdd447854bbc6cb6654d4bba39c4aa44 195 Gene3D G3DSA:1.10.3210.10 1 195 5.3E-67 T 14-10-2018 Atu1052 bdd447854bbc6cb6654d4bba39c4aa44 195 SUPERFAMILY SSF109604 1 184 1.19E-58 T 14-10-2018 Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 SUPERFAMILY SSF48008 80 207 4.18E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 Pfam PF07729 FCD domain 85 204 8.9E-24 T 14-10-2018 IPR011711 GntR, C-terminal Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 Gene3D G3DSA:1.20.120.530 80 215 1.6E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 SMART SM00345 17 75 1.5E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 SUPERFAMILY SSF46785 10 79 6.33E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 Gene3D G3DSA:1.10.10.10 10 76 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0791 89f2d85d65675abe0f2834b8fb3e16bf 226 SMART SM00895 85 205 3.3E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu2659 73dd18629b47b5cf1d44534fabeca3bd 411 SUPERFAMILY SSF103473 19 402 6.67E-39 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2659 73dd18629b47b5cf1d44534fabeca3bd 411 Pfam PF05977 Transmembrane secretion effector 11 408 1.2E-37 T 14-10-2018 IPR010290 Transmembrane secretion effector Atu2659 73dd18629b47b5cf1d44534fabeca3bd 411 Gene3D G3DSA:1.20.1250.20 18 398 1.1E-31 T 14-10-2018 Atu0308 7289be1293501a51bccc3473017cbddd 366 SMART SM00382 29 212 6.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0308 7289be1293501a51bccc3473017cbddd 366 SUPERFAMILY SSF52540 4 243 1.96E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0308 7289be1293501a51bccc3473017cbddd 366 SUPERFAMILY SSF50331 237 349 5.1E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu0308 7289be1293501a51bccc3473017cbddd 366 Gene3D G3DSA:2.40.50.140 280 333 1.9E-22 T 14-10-2018 Atu0308 7289be1293501a51bccc3473017cbddd 366 Pfam PF00005 ABC transporter 21 162 3.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0308 7289be1293501a51bccc3473017cbddd 366 Gene3D G3DSA:2.40.50.940 223 342 1.9E-22 T 14-10-2018 Atu0308 7289be1293501a51bccc3473017cbddd 366 Gene3D G3DSA:3.40.50.300 3 222 4.1E-63 T 14-10-2018 Atu0308 7289be1293501a51bccc3473017cbddd 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Gene3D G3DSA:1.10.3090.10 385 681 5.4E-8 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Pfam PF08335 GlnD PII-uridylyltransferase 205 342 1.9E-34 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Gene3D G3DSA:3.30.70.260 837 918 6.8E-8 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 SMART SM00471 486 633 2.0E-5 T 14-10-2018 IPR003607 HD/PDEase domain Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 922 304.337 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Pfam PF01966 HD domain 523 606 1.3E-12 T 14-10-2018 IPR006674 HD domain Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 SUPERFAMILY SSF55021 837 917 1.54E-14 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 909 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Pfam PF01842 ACT domain 840 897 4.5E-8 T 14-10-2018 IPR002912 ACT domain Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 PIRSF PIRSF006288 27 917 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 SUPERFAMILY SSF81593 220 330 4.87E-8 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 SUPERFAMILY SSF81891 390 633 4.12E-23 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 SUPERFAMILY SSF55021 727 782 2.12E-9 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 SUPERFAMILY SSF81301 54 199 1.6E-29 T 14-10-2018 Atu0346 9c454fe6be7cd600ca60560b8fb5e760 942 Pfam PF01909 Nucleotidyltransferase domain 97 128 5.8E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Atu5190 b5d3423d9269510097829d52c6f6c8e1 240 Gene3D G3DSA:3.40.50.1820 1 239 1.4E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5190 b5d3423d9269510097829d52c6f6c8e1 240 SUPERFAMILY SSF53474 2 238 2.6E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5190 b5d3423d9269510097829d52c6f6c8e1 240 Pfam PF12697 Alpha/beta hydrolase family 4 231 1.8E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 Gene3D G3DSA:2.40.50.940 225 351 2.8E-7 T 14-10-2018 Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 SUPERFAMILY SSF50331 240 356 7.23E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 SUPERFAMILY SSF52540 7 245 5.87E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 Pfam PF08402 TOBE domain 279 356 3.6E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 SMART SM00382 31 214 4.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 Gene3D G3DSA:3.40.50.300 6 224 9.6E-61 T 14-10-2018 Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 Gene3D G3DSA:2.40.50.140 286 348 2.8E-7 T 14-10-2018 Atu3089 7216fe9029cf5b97791891b7cb2b5f3c 361 Pfam PF00005 ABC transporter 23 164 2.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu8147 beb7726ed13c33ebcd3284bcc0d1ce14 674 SMART SM00257 606 655 0.0023 T 14-10-2018 IPR018392 LysM domain Atu8147 beb7726ed13c33ebcd3284bcc0d1ce14 674 Gene3D G3DSA:3.10.350.10 605 652 6.3E-12 T 14-10-2018 IPR036779 LysM domain superfamily Atu8147 beb7726ed13c33ebcd3284bcc0d1ce14 674 Pfam PF01476 LysM domain 608 651 4.3E-9 T 14-10-2018 IPR018392 LysM domain Atu8135 debc7cdd2dcae7bb597bf29591a10cc6 97 Pfam PF06568 Domain of unknown function (DUF1127) 48 66 3.8E-6 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 Atu1401 35288a2bfa2341e1c5919df0d9887497 383 Gene3D G3DSA:2.40.50.140 298 365 3.0E-20 T 14-10-2018 Atu1401 35288a2bfa2341e1c5919df0d9887497 383 Pfam PF00005 ABC transporter 20 179 9.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1401 35288a2bfa2341e1c5919df0d9887497 383 Pfam PF08402 TOBE domain 291 373 6.7E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu1401 35288a2bfa2341e1c5919df0d9887497 383 Gene3D G3DSA:3.40.50.300 3 240 7.8E-60 T 14-10-2018 Atu1401 35288a2bfa2341e1c5919df0d9887497 383 SUPERFAMILY SSF50331 254 381 7.29E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu1401 35288a2bfa2341e1c5919df0d9887497 383 Gene3D G3DSA:2.40.50.940 241 374 3.0E-20 T 14-10-2018 Atu1401 35288a2bfa2341e1c5919df0d9887497 383 SMART SM00382 28 234 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1401 35288a2bfa2341e1c5919df0d9887497 383 SUPERFAMILY SSF52540 4 260 4.03E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1401 35288a2bfa2341e1c5919df0d9887497 383 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0978 4da284883f081d09cc30b2c728dbd037 252 Gene3D G3DSA:3.40.50.2300 16 149 3.4E-33 T 14-10-2018 Atu0978 4da284883f081d09cc30b2c728dbd037 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 248 3.7E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0978 4da284883f081d09cc30b2c728dbd037 252 Gene3D G3DSA:1.10.10.10 150 252 8.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0978 4da284883f081d09cc30b2c728dbd037 252 SMART SM00448 28 139 5.1E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0978 4da284883f081d09cc30b2c728dbd037 252 Pfam PF00072 Response regulator receiver domain 30 140 3.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0978 4da284883f081d09cc30b2c728dbd037 252 SMART SM00862 173 248 2.0E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0978 4da284883f081d09cc30b2c728dbd037 252 SUPERFAMILY SSF52172 27 207 4.64E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu4623 39bd7b638fac4235a1f0cc6fbc8874f0 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 338 7.6E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4623 39bd7b638fac4235a1f0cc6fbc8874f0 342 SUPERFAMILY SSF161098 95 325 1.19E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu8124 7d1d976ddebca90d6bf90f01bb2bcc48 140 Pfam PF05099 Tellurite resistance protein TerB 10 135 6.0E-10 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Atu8124 7d1d976ddebca90d6bf90f01bb2bcc48 140 SUPERFAMILY SSF158682 19 135 1.57E-10 T 14-10-2018 IPR029024 TerB-like Atu8124 7d1d976ddebca90d6bf90f01bb2bcc48 140 Gene3D G3DSA:1.10.3680.10 1 140 8.3E-24 T 14-10-2018 IPR029024 TerB-like Atu0528 8d9ddcc28cae3193d690839b7338397b 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 5.9E-10 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atu0528 8d9ddcc28cae3193d690839b7338397b 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 5.9E-10 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atu0528 8d9ddcc28cae3193d690839b7338397b 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 5.9E-10 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atu0528 8d9ddcc28cae3193d690839b7338397b 142 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 141 3.6E-38 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atu0528 8d9ddcc28cae3193d690839b7338397b 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 140 1.0E-44 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Atu0528 8d9ddcc28cae3193d690839b7338397b 142 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 141 23.675 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Atu0528 8d9ddcc28cae3193d690839b7338397b 142 SUPERFAMILY SSF81330 11 136 8.63E-35 T 14-10-2018 IPR036019 Gated mechanosensitive channel Atu0528 8d9ddcc28cae3193d690839b7338397b 142 Gene3D G3DSA:1.10.1200.120 1 142 1.3E-42 T 14-10-2018 IPR036019 Gated mechanosensitive channel Atu0528 8d9ddcc28cae3193d690839b7338397b 142 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 Gene3D G3DSA:1.10.10.10 1 68 9.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 Gene3D G3DSA:2.10.109.10 121 239 5.0E-38 T 14-10-2018 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 Hamap MF_00015 LexA repressor [lexA]. 1 239 34.319 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 TIGRFAM TIGR00498 lexA: repressor LexA 2 239 1.7E-53 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 162 4.0E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 192 204 4.0E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 163 174 4.0E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 Pfam PF01726 LexA DNA binding domain 2 63 2.4E-16 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 SUPERFAMILY SSF46785 2 68 8.68E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 Pfam PF00717 Peptidase S24-like 155 219 1.1E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atu1395 f76aadfbfecd2009dee0b48bc6e4cfff 240 SUPERFAMILY SSF51306 116 237 3.14E-33 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 SUPERFAMILY SSF47384 220 292 3.53E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 SMART SM00388 237 295 0.0036 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 SMART SM00387 339 444 5.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 Gene3D G3DSA:3.30.565.10 298 441 5.6E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 SUPERFAMILY SSF55874 285 440 1.57E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 Gene3D G3DSA:1.10.287.130 185 296 7.9E-14 T 14-10-2018 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 5.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5176 a1bfb889d66fdcf50ce70956bfccc82e 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 440 8.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 Gene3D G3DSA:3.40.50.1980 28 185 9.8E-56 T 14-10-2018 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 54 72 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 184 201 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 210 228 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 233 250 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 29 50 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 73 92 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00691 Adhesin B signature 255 273 8.3E-33 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 SUPERFAMILY SSF53807 26 298 8.83E-91 T 14-10-2018 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 Gene3D G3DSA:3.40.50.1980 186 297 1.5E-38 T 14-10-2018 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00690 Adhesin family signature 73 90 1.3E-39 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00690 Adhesin family signature 29 47 1.3E-39 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00690 Adhesin family signature 60 73 1.3E-39 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00690 Adhesin family signature 263 282 1.3E-39 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00690 Adhesin family signature 237 255 1.3E-39 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 PRINTS PR00690 Adhesin family signature 184 205 1.3E-39 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu4471 a2f8bc9caa1d43709f222c3ecd5d01e7 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 2.2E-74 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Atu2088 e09d4b6b39681718b5096262501927cd 317 Pfam PF03799 Cell division protein FtsQ 170 282 2.9E-16 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB Atu2088 e09d4b6b39681718b5096262501927cd 317 Pfam PF08478 POTRA domain, FtsQ-type 97 165 5.3E-18 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type Atu2088 e09d4b6b39681718b5096262501927cd 317 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 67 300 21.741 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Atu2088 e09d4b6b39681718b5096262501927cd 317 Gene3D G3DSA:3.40.50.11690 167 293 6.7E-5 T 14-10-2018 Atu2088 e09d4b6b39681718b5096262501927cd 317 Gene3D G3DSA:3.10.20.310 97 164 2.0E-10 T 14-10-2018 Atu0554 eda6ae73323a594a12cffda47e4a0d3d 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atu0554 eda6ae73323a594a12cffda47e4a0d3d 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 9 136 6.7E-42 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Atu0554 eda6ae73323a594a12cffda47e4a0d3d 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 133 3.1E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atu4681 4c5a8e13673db8b772e89b3eda93e9ad 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4681 4c5a8e13673db8b772e89b3eda93e9ad 240 SUPERFAMILY SSF52540 1 235 4.44E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4681 4c5a8e13673db8b772e89b3eda93e9ad 240 SMART SM00382 26 213 2.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4681 4c5a8e13673db8b772e89b3eda93e9ad 240 Pfam PF00005 ABC transporter 17 165 1.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4681 4c5a8e13673db8b772e89b3eda93e9ad 240 PIRSF PIRSF039085 1 240 1.5E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu4681 4c5a8e13673db8b772e89b3eda93e9ad 240 Gene3D G3DSA:3.40.50.300 1 240 9.9E-74 T 14-10-2018 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SUPERFAMILY SSF50249 640 741 5.59E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Pfam PF16921 Tex protein YqgF-like domain 325 454 2.4E-50 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Gene3D G3DSA:1.10.150.310 502 633 9.2E-50 T 14-10-2018 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Pfam PF12836 Helix-hairpin-helix motif 494 558 9.4E-28 T 14-10-2018 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SUPERFAMILY SSF53098 320 472 1.82E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SUPERFAMILY SSF47781 563 634 4.67E-20 T 14-10-2018 IPR010994 RuvA domain 2-like Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SUPERFAMILY SSF158832 7 319 2.48E-113 T 14-10-2018 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Gene3D G3DSA:3.30.420.140 323 454 2.1E-147 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SMART SM00316 652 723 7.7E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SMART SM00732 324 427 9.0E-36 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 SUPERFAMILY SSF47781 473 561 2.45E-27 T 14-10-2018 IPR010994 RuvA domain 2-like Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Gene3D G3DSA:1.10.10.650 2 112 1.5E-38 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Pfam PF00575 S1 RNA binding domain 652 723 5.7E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Gene3D G3DSA:1.10.3500.10 115 501 2.1E-147 T 14-10-2018 IPR023323 Tex-like domain superfamily Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Gene3D G3DSA:2.40.50.140 634 726 2.2E-28 T 14-10-2018 Atu0648 7adb1a8829f19537c1f62d221c96b253 774 Pfam PF09371 Tex-like protein N-terminal domain 12 193 9.4E-68 T 14-10-2018 IPR018974 Tex-like protein, N-terminal Atu4304 eed2536d3cd625192d73c3cf27760832 496 Pfam PF00027 Cyclic nucleotide-binding domain 368 449 5.4E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu4304 eed2536d3cd625192d73c3cf27760832 496 SUPERFAMILY SSF50182 157 224 9.15E-11 T 14-10-2018 IPR010920 LSM domain superfamily Atu4304 eed2536d3cd625192d73c3cf27760832 496 SMART SM00100 350 466 4.0E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu4304 eed2536d3cd625192d73c3cf27760832 496 SUPERFAMILY SSF51206 341 462 5.37E-23 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu4304 eed2536d3cd625192d73c3cf27760832 496 Pfam PF00924 Mechanosensitive ion channel 117 313 3.3E-27 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atu4304 eed2536d3cd625192d73c3cf27760832 496 Gene3D G3DSA:2.60.120.10 324 471 6.8E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4304 eed2536d3cd625192d73c3cf27760832 496 PIRSF PIRSF026673 5 493 7.4E-200 T 14-10-2018 IPR016846 Predicted ion channel, cNMP-binding Atu4304 eed2536d3cd625192d73c3cf27760832 496 SUPERFAMILY SSF82689 229 324 5.89E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atu4304 eed2536d3cd625192d73c3cf27760832 496 SUPERFAMILY SSF82861 76 156 5.36E-5 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 Pfam PF13406 Transglycosylase SLT domain 40 344 4.6E-100 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 SUPERFAMILY SSF47090 364 420 6.02E-9 T 14-10-2018 IPR036365 PGBD-like superfamily Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 SUPERFAMILY SSF53955 31 349 4.12E-91 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 Gene3D G3DSA:1.10.101.10 358 421 5.8E-6 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 Gene3D G3DSA:1.10.8.350 88 226 2.7E-75 T 14-10-2018 Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 39 348 6.9E-110 T 14-10-2018 IPR011970 Lytic murein transglycosylase Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 Gene3D G3DSA:1.10.530.10 94 343 2.7E-75 T 14-10-2018 Atu0092 5fe159214d59a65d9eaf9a51e33d2add 421 Pfam PF01471 Putative peptidoglycan binding domain 366 419 1.4E-6 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu4060 2829d1260edc54c8fdcd0dfdc72a5478 329 SUPERFAMILY SSF53448 7 227 1.31E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4060 2829d1260edc54c8fdcd0dfdc72a5478 329 Pfam PF00535 Glycosyl transferase family 2 9 127 4.8E-20 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4060 2829d1260edc54c8fdcd0dfdc72a5478 329 Gene3D G3DSA:3.90.550.10 3 268 7.4E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu6128 a9df9a9d039fa9caf2c7efce9bc69d18 176 Pfam PF10502 Signal peptidase, peptidase S26 30 173 3.0E-43 T 14-10-2018 IPR019533 Peptidase S26 Atu6128 a9df9a9d039fa9caf2c7efce9bc69d18 176 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 6 174 1.2E-66 T 14-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 Atu6128 a9df9a9d039fa9caf2c7efce9bc69d18 176 Gene3D G3DSA:2.10.109.10 41 173 5.3E-9 T 14-10-2018 Atu6128 a9df9a9d039fa9caf2c7efce9bc69d18 176 SUPERFAMILY SSF51306 29 172 6.8E-21 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atu5219 72971f38ac4bce7f37bba188c45640af 307 SUPERFAMILY SSF161098 89 274 5.63E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu5219 72971f38ac4bce7f37bba188c45640af 307 Gene3D G3DSA:1.10.3720.10 88 277 2.2E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu5219 72971f38ac4bce7f37bba188c45640af 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 272 3.4E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 155 180 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 181 204 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.2E-95 T 14-10-2018 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 Gene3D G3DSA:1.10.3370.10 12 430 2.7E-159 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 430 2.1E-129 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 PIRSF PIRSF004557 2 442 2.9E-120 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 SUPERFAMILY SSF103491 15 425 6.15E-129 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 ProSitePatterns PS00756 Protein secY signature 2. 174 191 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 Pfam PF00344 SecY translocase 81 418 3.7E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Atu1927 95293cb186dd9cfa7ace137237ff5909 446 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 434 29.161 T 14-10-2018 IPR026593 Protein translocase subunit SecY Atu4375 9eea6cf9640b7c811a2f77bb2579511f 389 Gene3D G3DSA:3.40.50.720 18 361 9.9E-131 T 14-10-2018 Atu4375 9eea6cf9640b7c811a2f77bb2579511f 389 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 139 1.7E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu4375 9eea6cf9640b7c811a2f77bb2579511f 389 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 155 275 1.4E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu4375 9eea6cf9640b7c811a2f77bb2579511f 389 SUPERFAMILY SSF55347 151 328 1.59E-39 T 14-10-2018 Atu4375 9eea6cf9640b7c811a2f77bb2579511f 389 SUPERFAMILY SSF51735 8 175 6.19E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4375 9eea6cf9640b7c811a2f77bb2579511f 389 Gene3D G3DSA:3.30.360.10 148 385 9.9E-131 T 14-10-2018 Atu0291 2322b96d04e96325b2449bee7add8ab2 290 SUPERFAMILY SSF51735 1 285 1.08E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0291 2322b96d04e96325b2449bee7add8ab2 290 Gene3D G3DSA:3.40.50.720 1 286 6.9E-93 T 14-10-2018 Atu0291 2322b96d04e96325b2449bee7add8ab2 290 Pfam PF01370 NAD dependent epimerase/dehydratase family 97 178 6.5E-6 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 264 376 2.8E-32 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 PIRSF PIRSF000447 1 422 1.5E-159 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 255 8.0E-54 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 SMART SM00825 Beta-ketoacyl synthase 4 422 1.0E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 SUPERFAMILY SSF53901 224 421 1.24E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 Gene3D G3DSA:3.40.47.10 1 263 3.5E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 SUPERFAMILY SSF53901 1 260 5.51E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 418 4.7E-161 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Atu4216 a9e4bf64eca83d4dd02d4446f74329f4 432 Gene3D G3DSA:3.40.47.10 269 427 6.2E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 SUPERFAMILY SSF55186 97 239 2.22E-30 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 Pfam PF01411 tRNA synthetases class II (A) 24 96 1.3E-9 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 189 233 1.7E-10 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 SUPERFAMILY SSF50447 4 93 2.22E-12 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 Gene3D G3DSA:2.40.30.130 1 90 1.8E-15 T 14-10-2018 Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 SMART SM00863 189 235 4.7E-10 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atu1216 60b6bd4dd65a70f8cd3436bed23f0234 245 Gene3D G3DSA:3.30.980.10 94 245 1.9E-29 T 14-10-2018 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Gene3D G3DSA:3.30.310.50 409 542 1.8E-49 T 14-10-2018 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 152 1.1E-35 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Gene3D G3DSA:3.40.120.10 290 408 4.6E-48 T 14-10-2018 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Gene3D G3DSA:3.40.120.10 2 187 9.7E-81 T 14-10-2018 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 293 406 2.4E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 105 119 4.3E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 253 4.3E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 269 284 4.3E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 223 4.3E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 455 507 1.6E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 SUPERFAMILY SSF55957 408 542 4.88E-47 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 SUPERFAMILY SSF53738 182 290 3.92E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 183 285 2.8E-13 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 SUPERFAMILY SSF53738 277 413 1.26E-38 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 SUPERFAMILY SSF53738 2 211 8.63E-50 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 Gene3D G3DSA:3.40.120.10 188 289 4.3E-36 T 14-10-2018 Atu4074 0db9d988a280cfe9720fdc22b588306f 542 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 106 115 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu0776 d03d17710a66adaa4ee4afe13f29058f 146 Hamap MF_00042 Ribonuclease H [rnhA]. 1 146 34.299 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 Atu0776 d03d17710a66adaa4ee4afe13f29058f 146 SUPERFAMILY SSF53098 1 141 8.73E-59 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu0776 d03d17710a66adaa4ee4afe13f29058f 146 Gene3D G3DSA:3.30.420.10 1 145 3.6E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu0776 d03d17710a66adaa4ee4afe13f29058f 146 Pfam PF00075 RNase H 2 140 2.9E-51 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 Pfam PF07729 FCD domain 100 219 1.2E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 SUPERFAMILY SSF46785 13 114 4.16E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 SUPERFAMILY SSF48008 98 228 1.91E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 SMART SM00895 100 221 1.6E-19 T 14-10-2018 IPR011711 GntR, C-terminal Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 Gene3D G3DSA:1.20.120.530 97 234 4.7E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 SMART SM00345 23 82 5.7E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 Gene3D G3DSA:1.10.10.10 8 82 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3794 b302305dde1c6f5d2e3de3077b81c5f9 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 5.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1151 3687072c756f89d90900ffef8443a299 388 TIGRFAM TIGR01388 rnd: ribonuclease D 1 364 7.8E-142 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Atu1151 3687072c756f89d90900ffef8443a299 388 SMART SM00474 1 168 2.3E-29 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atu1151 3687072c756f89d90900ffef8443a299 388 Hamap MF_01899 Ribonuclease D [rnd]. 1 364 44.767 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Atu1151 3687072c756f89d90900ffef8443a299 388 Gene3D G3DSA:3.30.420.10 1 190 8.2E-62 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu1151 3687072c756f89d90900ffef8443a299 388 SUPERFAMILY SSF47819 298 366 2.43E-15 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Atu1151 3687072c756f89d90900ffef8443a299 388 SUPERFAMILY SSF47819 188 295 2.62E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Atu1151 3687072c756f89d90900ffef8443a299 388 SUPERFAMILY SSF53098 1 201 1.35E-66 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu1151 3687072c756f89d90900ffef8443a299 388 Pfam PF00570 HRDC domain 210 275 8.6E-12 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Atu1151 3687072c756f89d90900ffef8443a299 388 Gene3D G3DSA:1.10.150.80 192 291 1.4E-19 T 14-10-2018 Atu1151 3687072c756f89d90900ffef8443a299 388 Pfam PF01612 3'-5' exonuclease 1 168 6.8E-34 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atu5259 700e518487072bc88a1226c7e4a87827 316 Pfam PF03466 LysR substrate binding domain 100 307 3.8E-23 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5259 700e518487072bc88a1226c7e4a87827 316 Gene3D G3DSA:1.10.10.10 2 89 2.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5259 700e518487072bc88a1226c7e4a87827 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5259 700e518487072bc88a1226c7e4a87827 316 SUPERFAMILY SSF53850 93 309 4.89E-42 T 14-10-2018 Atu5259 700e518487072bc88a1226c7e4a87827 316 Gene3D G3DSA:3.40.190.10 184 282 5.3E-62 T 14-10-2018 Atu5259 700e518487072bc88a1226c7e4a87827 316 SUPERFAMILY SSF46785 8 85 8.84E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5259 700e518487072bc88a1226c7e4a87827 316 Gene3D G3DSA:3.40.190.10 95 306 5.3E-62 T 14-10-2018 Atu2056 46801f4cb0087c1ecb8df78a78a665b7 136 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 61 109 8.9E-16 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu2056 46801f4cb0087c1ecb8df78a78a665b7 136 Pfam PF02627 Carboxymuconolactone decarboxylase family 47 124 2.0E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu2056 46801f4cb0087c1ecb8df78a78a665b7 136 Gene3D G3DSA:1.20.1290.10 1 135 4.7E-50 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu2056 46801f4cb0087c1ecb8df78a78a665b7 136 SUPERFAMILY SSF69118 1 129 1.44E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0219 ad76a673f723605c4b28a94d477b55f3 427 Gene3D G3DSA:3.40.50.300 164 406 3.0E-41 T 14-10-2018 Atu0219 ad76a673f723605c4b28a94d477b55f3 427 SUPERFAMILY SSF52172 75 154 5.28E-6 T 14-10-2018 IPR011006 CheY-like superfamily Atu0219 ad76a673f723605c4b28a94d477b55f3 427 SUPERFAMILY SSF52540 165 406 5.25E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0219 ad76a673f723605c4b28a94d477b55f3 427 Gene3D G3DSA:3.40.50.2300 33 160 3.7E-43 T 14-10-2018 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 SUPERFAMILY SSF52540 2 252 1.13E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 SMART SM00382 297 490 7.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 SMART SM00382 31 230 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 Gene3D G3DSA:3.40.50.300 1 270 1.3E-66 T 14-10-2018 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 Gene3D G3DSA:3.40.50.300 271 533 8.2E-75 T 14-10-2018 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 Pfam PF00005 ABC transporter 288 441 8.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 264 0.36 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 495 524 2.3E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 SUPERFAMILY SSF52540 272 512 9.92E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5347 d825e02beae2cf81be7efc3596dc8eff 535 Pfam PF00005 ABC transporter 22 180 1.5E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1272 9eb28125695f4be4cb12816a188147e1 396 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 45 56 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1272 9eb28125695f4be4cb12816a188147e1 396 Gene3D G3DSA:1.10.645.20 6 396 3.7E-169 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1272 9eb28125695f4be4cb12816a188147e1 396 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 396 48.373 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1272 9eb28125695f4be4cb12816a188147e1 396 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 8 396 9.4E-177 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1272 9eb28125695f4be4cb12816a188147e1 396 SUPERFAMILY SSF56762 18 396 7.85E-137 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1272 9eb28125695f4be4cb12816a188147e1 396 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 122 396 9.0E-121 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1721 5dcdb72ce66bee38f9309fc3e93d5402 223 Gene3D G3DSA:3.40.50.150 2 214 4.9E-52 T 14-10-2018 Atu1721 5dcdb72ce66bee38f9309fc3e93d5402 223 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 14 199 1.3E-40 T 14-10-2018 Atu1721 5dcdb72ce66bee38f9309fc3e93d5402 223 SUPERFAMILY SSF53335 1 186 1.39E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 SMART SM00382 340 532 2.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 SMART SM00382 34 235 1.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 SUPERFAMILY SSF52540 306 555 5.79E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 SUPERFAMILY SSF52540 9 256 2.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 ProSitePatterns PS00211 ABC transporters family signature. 456 470 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 Pfam PF00005 ABC transporter 26 184 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 Pfam PF00005 ABC transporter 332 483 1.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 535 582 5.8E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 266 4.4E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 Gene3D G3DSA:3.40.50.300 302 595 8.4E-83 T 14-10-2018 Atu4526 9f3000a8f2fefe22fa19d54477432fa1 606 Gene3D G3DSA:3.40.50.300 7 287 1.2E-84 T 14-10-2018 Atu4465 d6e409203774331274f8d67ea56a856c 255 Pfam PF09339 IclR helix-turn-helix domain 13 62 5.1E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4465 d6e409203774331274f8d67ea56a856c 255 Gene3D G3DSA:1.10.10.10 3 80 2.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4465 d6e409203774331274f8d67ea56a856c 255 SUPERFAMILY SSF46785 13 80 8.59E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4465 d6e409203774331274f8d67ea56a856c 255 SUPERFAMILY SSF55781 76 250 1.44E-31 T 14-10-2018 Atu4465 d6e409203774331274f8d67ea56a856c 255 Gene3D G3DSA:3.30.450.40 83 251 4.0E-29 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4465 d6e409203774331274f8d67ea56a856c 255 Pfam PF01614 Bacterial transcriptional regulator 130 249 1.4E-12 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu4465 d6e409203774331274f8d67ea56a856c 255 SMART SM00346 11 100 9.2E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu3768 dcc64881830d11f55524cfcc7b0f19f0 481 Gene3D G3DSA:3.40.50.720 16 432 3.3E-190 T 14-10-2018 Atu3768 dcc64881830d11f55524cfcc7b0f19f0 481 Gene3D G3DSA:3.30.360.30 164 477 3.3E-190 T 14-10-2018 IPR023181 Homospermidine synthase-like, C-terminal KEGG: 00960+2.5.1.44 Atu3768 dcc64881830d11f55524cfcc7b0f19f0 481 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 162 449 1.5E-25 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Atu3768 dcc64881830d11f55524cfcc7b0f19f0 481 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 16 158 1.3E-33 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Atu3307 6a25bda235866319ed71b8813107e527 351 PRINTS PR00735 Glycosyl hydrolase family 8 signature 117 135 6.3E-19 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atu3307 6a25bda235866319ed71b8813107e527 351 PRINTS PR00735 Glycosyl hydrolase family 8 signature 247 256 6.3E-19 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atu3307 6a25bda235866319ed71b8813107e527 351 PRINTS PR00735 Glycosyl hydrolase family 8 signature 330 344 6.3E-19 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atu3307 6a25bda235866319ed71b8813107e527 351 PRINTS PR00735 Glycosyl hydrolase family 8 signature 59 72 6.3E-19 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atu3307 6a25bda235866319ed71b8813107e527 351 PRINTS PR00735 Glycosyl hydrolase family 8 signature 224 235 6.3E-19 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atu3307 6a25bda235866319ed71b8813107e527 351 Gene3D G3DSA:1.50.10.10 21 347 2.1E-93 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu3307 6a25bda235866319ed71b8813107e527 351 Pfam PF01270 Glycosyl hydrolases family 8 15 340 9.0E-59 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Atu3307 6a25bda235866319ed71b8813107e527 351 SUPERFAMILY SSF48208 11 345 3.64E-87 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 Gene3D G3DSA:1.10.1740.10 309 394 5.8E-25 T 14-10-2018 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 SUPERFAMILY SSF51735 8 156 1.34E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 152 235 5.8E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 10 390 4.1E-129 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 SUPERFAMILY SSF69055 297 390 6.41E-26 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 SUPERFAMILY SSF55347 132 270 7.19E-57 T 14-10-2018 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 PIRSF PIRSF006205 8 396 2.1E-148 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 11 389 45.199 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 11 138 6.8E-38 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 384 7.5E-38 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Atu2612 c445fcb0617df5b9258ca91e251e0ead 397 Gene3D G3DSA:3.40.50.720 5 156 9.0E-46 T 14-10-2018 Atu0582 9a57982c856807a433c4b4154dc60a26 240 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 2 233 3.4E-56 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Atu0582 9a57982c856807a433c4b4154dc60a26 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 7 28 7.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atu0582 9a57982c856807a433c4b4154dc60a26 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 169 191 7.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atu0582 9a57982c856807a433c4b4154dc60a26 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 69 88 7.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atu0582 9a57982c856807a433c4b4154dc60a26 240 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 191 210 7.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atu0582 9a57982c856807a433c4b4154dc60a26 240 Pfam PF01311 Bacterial export proteins, family 1 1 233 9.6E-56 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 16 481 4.7E-151 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 876 22.643 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atu1507 9214338c21cc211f9615e92be51a7f60 906 SUPERFAMILY SSF101904 508 888 3.66E-93 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Atu1507 9214338c21cc211f9615e92be51a7f60 906 SUPERFAMILY SSF56719 14 497 1.7E-178 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Gene3D G3DSA:3.30.1360.40 220 316 6.6E-221 T 14-10-2018 Atu1507 9214338c21cc211f9615e92be51a7f60 906 SMART SM00434 1 474 7.9E-271 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1507 9214338c21cc211f9615e92be51a7f60 906 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 1 875 0.0 T 14-10-2018 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Gene3D G3DSA:1.10.268.10 353 468 6.6E-221 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Gene3D G3DSA:3.90.199.10 17 496 6.6E-221 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 671 718 3.4E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 623 667 4.4E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 828 875 3.5E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 565 612 1.0E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 513 559 2.8E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu1507 9214338c21cc211f9615e92be51a7f60 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 776 824 1.2E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 82 99 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 SUPERFAMILY SSF51206 7 139 7.86E-34 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 7.0E-21 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 SMART SM00100 15 132 1.1E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 PRINTS PR00103 cAMP-dependent protein kinase signature 80 89 1.5E-6 T 14-10-2018 Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 PRINTS PR00103 cAMP-dependent protein kinase signature 36 50 1.5E-6 T 14-10-2018 Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 PRINTS PR00103 cAMP-dependent protein kinase signature 51 65 1.5E-6 T 14-10-2018 Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 PRINTS PR00103 cAMP-dependent protein kinase signature 92 103 1.5E-6 T 14-10-2018 Atu2578 6b0c2e7a0c0b0a4ca4f30a6d0c782de3 151 Gene3D G3DSA:2.60.120.10 6 147 2.3E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3382 c9f1d67e23da1b17136232394b3207a1 437 Gene3D G3DSA:2.40.50.100 59 123 1.2E-7 T 14-10-2018 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 358 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 416 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 436 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 381 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 26 49 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 322 2.0E-54 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 Pfam PF13437 HlyD family secretion protein 289 392 1.3E-16 T 14-10-2018 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 Pfam PF13533 Biotin-lipoyl like 59 99 2.5E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atu3382 c9f1d67e23da1b17136232394b3207a1 437 Gene3D G3DSA:2.40.30.170 326 414 1.1E-12 T 14-10-2018 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 Gene3D G3DSA:1.10.287.470 163 288 1.1E-12 T 14-10-2018 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 Gene3D G3DSA:2.40.50.100 289 324 1.1E-12 T 14-10-2018 Atu3382 c9f1d67e23da1b17136232394b3207a1 437 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 19 437 6.4E-113 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Atu5254 333125c6d90328b707621920ea11a74b 314 SUPERFAMILY SSF161098 80 298 4.19E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu5254 333125c6d90328b707621920ea11a74b 314 Gene3D G3DSA:1.10.3720.10 74 306 1.6E-26 T 14-10-2018 IPR035906 MetI-like superfamily Atu5254 333125c6d90328b707621920ea11a74b 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 310 7.8E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4685 1098865103163b89eda8baf8916ba666 328 Gene3D G3DSA:3.40.50.2300 49 295 4.4E-67 T 14-10-2018 Atu4685 1098865103163b89eda8baf8916ba666 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 33 1.4E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4685 1098865103163b89eda8baf8916ba666 328 Gene3D G3DSA:1.10.260.40 1 43 8.8E-14 T 14-10-2018 Atu4685 1098865103163b89eda8baf8916ba666 328 SMART SM00354 1 56 3.2E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4685 1098865103163b89eda8baf8916ba666 328 Gene3D G3DSA:3.40.50.2300 144 279 4.4E-67 T 14-10-2018 Atu4685 1098865103163b89eda8baf8916ba666 328 SUPERFAMILY SSF47413 1 45 5.63E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4685 1098865103163b89eda8baf8916ba666 328 Pfam PF13377 Periplasmic binding protein-like domain 154 323 4.1E-28 T 14-10-2018 Atu4685 1098865103163b89eda8baf8916ba666 328 SUPERFAMILY SSF53822 43 301 3.26E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 138 203 3.0E-23 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 Gene3D G3DSA:3.30.70.1400 10 94 4.3E-24 T 14-10-2018 Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 PIRSF PIRSF006487 129 243 1.6E-4 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 PIRSF PIRSF006487 5 108 4.3E-10 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 178 243 9.5E-10 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 SUPERFAMILY SSF103025 5 194 3.92E-46 T 14-10-2018 Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 Gene3D G3DSA:3.30.1360.120 113 264 1.9E-25 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu1053 872a8516c78ffc684f3e5a5ac8e469ad 282 Pfam PF01571 Aminomethyltransferase folate-binding domain 12 92 1.2E-10 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SMART SM00091 144 214 7.2E-5 T 14-10-2018 IPR000014 PAS domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SMART SM00091 21 88 2.3E-6 T 14-10-2018 IPR000014 PAS domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Gene3D G3DSA:3.30.565.10 333 464 1.9E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 139 1.4E-16 T 14-10-2018 IPR000014 PAS domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 268 1.5E-13 T 14-10-2018 IPR000014 PAS domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SUPERFAMILY SSF55785 128 254 9.42E-20 T 14-10-2018 IPR035965 PAS domain superfamily Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Pfam PF13426 PAS domain 155 262 2.0E-12 T 14-10-2018 IPR000014 PAS domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Pfam PF13426 PAS domain 36 131 2.5E-10 T 14-10-2018 IPR000014 PAS domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SUPERFAMILY SSF55874 338 460 4.19E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Pfam PF07568 Histidine kinase 276 347 4.4E-18 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Pfam PF13581 Histidine kinase-like ATPase domain 362 427 1.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SUPERFAMILY SSF55785 18 130 3.54E-17 T 14-10-2018 IPR035965 PAS domain superfamily Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Gene3D G3DSA:3.30.450.20 142 271 3.7E-21 T 14-10-2018 Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 Gene3D G3DSA:3.30.450.20 33 141 2.9E-17 T 14-10-2018 Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SMART SM00086 91 132 0.096 T 14-10-2018 IPR001610 PAC motif Atu5377 df564e91d7e120c183e36b34ba3d3c32 466 SMART SM00086 221 263 5.9 T 14-10-2018 IPR001610 PAC motif Atu5236 dd68bc3fc9c6d3113451c9116c6f1f58 243 SMART SM00382 28 215 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5236 dd68bc3fc9c6d3113451c9116c6f1f58 243 Pfam PF00005 ABC transporter 19 167 2.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5236 dd68bc3fc9c6d3113451c9116c6f1f58 243 SUPERFAMILY SSF52540 3 236 1.54E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5236 dd68bc3fc9c6d3113451c9116c6f1f58 243 Gene3D G3DSA:3.40.50.300 2 241 4.4E-76 T 14-10-2018 Atu5236 dd68bc3fc9c6d3113451c9116c6f1f58 243 PIRSF PIRSF039085 1 243 4.6E-109 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu5236 dd68bc3fc9c6d3113451c9116c6f1f58 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5181 d574ab4d956909e165315c36eae27bd0 245 Gene3D G3DSA:3.40.50.720 1 245 1.1E-78 T 14-10-2018 Atu5181 d574ab4d956909e165315c36eae27bd0 245 SUPERFAMILY SSF51735 6 243 3.78E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5181 d574ab4d956909e165315c36eae27bd0 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.7E-63 T 14-10-2018 Atu5181 d574ab4d956909e165315c36eae27bd0 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu2403 149d031ad9f1ebc00e1d6a123aeb19e0 139 Pfam PF07007 Lysozyme inhibitor LprI 34 132 2.7E-23 T 14-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Atu2403 149d031ad9f1ebc00e1d6a123aeb19e0 139 Gene3D G3DSA:1.20.1270.180 23 138 1.4E-30 T 14-10-2018 Atu3191 e4803bcd5510c2f7666473f17cb3ef93 228 SUPERFAMILY SSF56925 43 228 4.45E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu3191 e4803bcd5510c2f7666473f17cb3ef93 228 Gene3D G3DSA:2.40.160.20 43 228 8.8E-56 T 14-10-2018 Atu3191 e4803bcd5510c2f7666473f17cb3ef93 228 Pfam PF03922 OmpW family 44 228 4.1E-58 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 Pfam PF13377 Periplasmic binding protein-like domain 173 332 8.1E-40 T 14-10-2018 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 Gene3D G3DSA:3.40.50.2300 164 293 6.0E-80 T 14-10-2018 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 SMART SM00354 6 76 6.6E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 SUPERFAMILY SSF53822 66 334 2.94E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 2.5E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 Gene3D G3DSA:3.40.50.2300 66 310 6.0E-80 T 14-10-2018 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 Gene3D G3DSA:1.10.260.40 1 63 8.0E-20 T 14-10-2018 Atu4373 1b3dcb76ac0065e6d5edc8ac42a41bd4 340 SUPERFAMILY SSF47413 8 63 4.58E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4552 933f4fef97c7a09793d0e606dc88787c 307 SUPERFAMILY SSF53822 21 305 3.39E-81 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4552 933f4fef97c7a09793d0e606dc88787c 307 Pfam PF13407 Periplasmic binding protein domain 23 284 1.8E-56 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4552 933f4fef97c7a09793d0e606dc88787c 307 Gene3D G3DSA:3.40.50.2300 129 302 3.4E-83 T 14-10-2018 Atu4552 933f4fef97c7a09793d0e606dc88787c 307 Gene3D G3DSA:3.40.50.2300 22 295 3.4E-83 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 SUPERFAMILY SSF101790 890 984 4.74E-16 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atu4222 f9619222f457793496322c11853f34ea 987 SUPERFAMILY SSF103025 594 883 2.98E-87 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 192 2.7E-7 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 292 2.7E-7 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:3.50.50.60 292 407 1.3E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4222 f9619222f457793496322c11853f34ea 987 PIRSF PIRSF037980 1 987 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:3.10.20.440 10 105 2.0E-7 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 190 1.8E-6 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 298 1.8E-6 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:1.10.10.1100 494 568 1.3E-84 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:3.50.50.60 170 573 1.3E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:2.40.30.110 893 979 3.3E-7 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:3.30.1360.120 595 856 1.1E-83 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu4222 f9619222f457793496322c11853f34ea 987 SUPERFAMILY SSF51905 159 468 4.47E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4222 f9619222f457793496322c11853f34ea 987 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 100 5.4E-26 T 14-10-2018 Atu4222 f9619222f457793496322c11853f34ea 987 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 170 304 1.1E-8 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu4222 f9619222f457793496322c11853f34ea 987 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 874 962 4.6E-13 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu4222 f9619222f457793496322c11853f34ea 987 Pfam PF01571 Aminomethyltransferase folate-binding domain 600 865 4.2E-66 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu4222 f9619222f457793496322c11853f34ea 987 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 3 987 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4222 f9619222f457793496322c11853f34ea 987 Gene3D G3DSA:3.30.70.1400 654 880 1.1E-83 T 14-10-2018 Atu0905 afe87aa9666a77f627c8e6d1b336ef44 106 SUPERFAMILY SSF57716 75 104 9.28E-8 T 14-10-2018 Atu0905 afe87aa9666a77f627c8e6d1b336ef44 106 SUPERFAMILY SSF109635 3 74 1.7E-7 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily Atu0905 afe87aa9666a77f627c8e6d1b336ef44 106 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 73 104 2.1E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Atu0905 afe87aa9666a77f627c8e6d1b336ef44 106 Gene3D G3DSA:1.20.120.910 1 106 6.2E-41 T 14-10-2018 Atu0292 5f8999cb021919c86a634c48d8f9ae0c 326 SUPERFAMILY SSF46548 86 203 2.09E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atu0292 5f8999cb021919c86a634c48d8f9ae0c 326 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 1 295 4.4E-122 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Atu0292 5f8999cb021919c86a634c48d8f9ae0c 326 Pfam PF13484 4Fe-4S double cluster binding domain 139 203 2.1E-19 T 14-10-2018 Atu0292 5f8999cb021919c86a634c48d8f9ae0c 326 Pfam PF08331 Domain of unknown function (DUF1730) 11 87 3.5E-21 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Atu0292 5f8999cb021919c86a634c48d8f9ae0c 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu2494 4b34a8c7d38fb3d9fd7999dfae64d528 481 SUPERFAMILY SSF52467 311 481 4.25E-74 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atu2494 4b34a8c7d38fb3d9fd7999dfae64d528 481 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 477 8.9E-191 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Atu2494 4b34a8c7d38fb3d9fd7999dfae64d528 481 PIRSF PIRSF000204 1 481 4.8E-216 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Atu2494 4b34a8c7d38fb3d9fd7999dfae64d528 481 Gene3D G3DSA:3.40.50.1220 303 481 1.6E-85 T 14-10-2018 Atu4654 98e79947531e0ea722d84dc6eaac3d54 421 Gene3D G3DSA:3.40.190.10 26 420 2.9E-84 T 14-10-2018 Atu4654 98e79947531e0ea722d84dc6eaac3d54 421 Pfam PF13416 Bacterial extracellular solute-binding protein 47 359 1.4E-40 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4654 98e79947531e0ea722d84dc6eaac3d54 421 SUPERFAMILY SSF53850 29 411 4.5E-79 T 14-10-2018 Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 Gene3D G3DSA:3.40.50.300 3 330 3.9E-89 T 14-10-2018 Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 SMART SM00382 40 232 5.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 SUPERFAMILY SSF52540 5 254 2.21E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 1.7E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 Pfam PF00005 ABC transporter 32 182 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6141 3ad19859aa5af226f38aba5ce13d9fcb 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 316 9.3E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 Pfam PF03466 LysR substrate binding domain 90 293 1.1E-39 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 Gene3D G3DSA:3.40.190.10 94 292 8.3E-55 T 14-10-2018 Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 SUPERFAMILY SSF53850 92 293 1.27E-38 T 14-10-2018 Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 SUPERFAMILY SSF46785 5 89 6.63E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 Gene3D G3DSA:1.10.10.10 4 90 7.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0261 2ea5da7271f8102bf7c81e1d278427a1 296 Gene3D G3DSA:3.40.190.10 166 267 8.3E-55 T 14-10-2018 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 SUPERFAMILY SSF53901 6 270 7.27E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 PIRSF PIRSF000429 1 393 4.8E-121 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 Gene3D G3DSA:3.40.47.10 7 276 2.5E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 2.7E-141 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 Pfam PF00108 Thiolase, N-terminal domain 6 263 1.1E-102 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 2.9E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 Gene3D G3DSA:3.40.47.10 128 390 2.5E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Atu2769 55b03768af089fd4ee66b9734d577cd2 393 SUPERFAMILY SSF53901 271 391 1.06E-45 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0762 92eb0ee85312c95ea83f95a3da3c7541 102 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 93 9.9E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Atu0762 92eb0ee85312c95ea83f95a3da3c7541 102 PIRSF PIRSF036522 1 102 2.3E-64 T 14-10-2018 IPR011315 NTP pyrophosphohydrolase MazG-related, Rhizobiaceae-type Atu0762 92eb0ee85312c95ea83f95a3da3c7541 102 Gene3D G3DSA:1.10.287.1080 3 97 7.0E-17 T 14-10-2018 Atu0762 92eb0ee85312c95ea83f95a3da3c7541 102 SUPERFAMILY SSF101386 19 97 1.87E-17 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:3.30.2090.10 717 805 8.4E-248 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 SUPERFAMILY SSF82866 312 504 3.66E-39 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:3.30.70.1430 567 665 8.4E-248 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:1.20.1640.10 520 1017 8.4E-248 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 53 71 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 399 423 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 25 49 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 PRINTS PR00702 Acriflavin resistance protein family signature 371 392 1.9E-26 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:3.30.70.1440 666 865 8.4E-248 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Pfam PF00873 AcrB/AcrD/AcrF family 19 1020 4.4E-167 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 SUPERFAMILY SSF82693 55 151 5.06E-17 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 SUPERFAMILY SSF82866 805 1026 7.98E-44 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 SUPERFAMILY SSF82693 151 337 7.5E-14 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:3.30.2090.10 194 283 8.4E-248 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:3.30.70.1320 150 341 8.4E-248 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 SUPERFAMILY SSF82714 718 801 2.49E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:1.20.1640.10 25 519 8.4E-248 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 Gene3D G3DSA:3.30.70.1430 55 813 8.4E-248 T 14-10-2018 Atu5381 e51cbbe17f4e6055ee510dec457fc9ec 1052 SUPERFAMILY SSF82714 200 280 1.15E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 335 2.6E-53 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 Gene3D G3DSA:1.10.8.60 146 214 9.8E-8 T 14-10-2018 Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 Gene3D G3DSA:3.40.50.300 16 136 8.7E-10 T 14-10-2018 Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 Pfam PF06144 DNA polymerase III, delta subunit 24 192 1.9E-11 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 SUPERFAMILY SSF52540 17 212 1.35E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 SUPERFAMILY SSF48019 216 335 1.0E-13 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Atu2750 02654183ba22ce5f9b2da0ec1c5770f8 345 Gene3D G3DSA:1.20.272.10 219 317 2.5E-5 T 14-10-2018 Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 74 448 9.9E-155 T 14-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 Gene3D G3DSA:3.50.50.60 53 439 5.6E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 Gene3D G3DSA:1.10.8.260 317 372 5.6E-68 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 SUPERFAMILY SSF51905 52 445 1.05E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 Gene3D G3DSA:2.40.30.10 238 389 5.6E-68 T 14-10-2018 Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 53 441 1.3E-84 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 Pfam PF03486 HI0933-like protein 52 441 1.3E-99 T 14-10-2018 Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 SUPERFAMILY SSF160996 242 340 9.81E-10 T 14-10-2018 Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 396 418 1.9E-5 T 14-10-2018 Atu4043 d323ac467bc1cc35fbd70fc6c6ad9342 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 53 72 1.9E-5 T 14-10-2018 Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 Pfam PF12802 MarR family 34 93 1.0E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 Gene3D G3DSA:1.10.10.10 2 146 1.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 SUPERFAMILY SSF46785 8 144 1.21E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2665 77555a9ec1278a9a9426bb53e4b70ef7 152 SMART SM00347 29 129 1.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1904 0fa5773af9f024e87be9c8772df8843f 311 Pfam PF04198 Putative sugar-binding domain 54 307 6.5E-67 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Atu1904 0fa5773af9f024e87be9c8772df8843f 311 SUPERFAMILY SSF46785 9 49 6.26E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1904 0fa5773af9f024e87be9c8772df8843f 311 SUPERFAMILY SSF100950 54 306 2.01E-67 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu1904 0fa5773af9f024e87be9c8772df8843f 311 Pfam PF12802 MarR family 15 46 3.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1904 0fa5773af9f024e87be9c8772df8843f 311 Gene3D G3DSA:3.40.50.1360 47 308 4.7E-82 T 14-10-2018 Atu1904 0fa5773af9f024e87be9c8772df8843f 311 Gene3D G3DSA:1.10.10.60 1 45 2.2E-15 T 14-10-2018 Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 Gene3D G3DSA:3.40.50.620 1 207 2.8E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 SUPERFAMILY SSF52402 1 242 1.57E-48 T 14-10-2018 Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 Pfam PF03054 tRNA methyl transferase 1 357 1.8E-105 T 14-10-2018 Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 Gene3D G3DSA:2.30.30.280 213 272 1.9E-16 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 Gene3D G3DSA:2.40.30.10 273 368 1.3E-9 T 14-10-2018 Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 358 36.332 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Atu3703 b78e71c2e3203206baf14f7eba8f79fc 380 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 357 6.7E-90 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Atu3871 18257b8a4b61bf0ef0ddb6d746155fdd 381 SUPERFAMILY SSF51395 5 379 1.83E-95 T 14-10-2018 Atu3871 18257b8a4b61bf0ef0ddb6d746155fdd 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 276 282 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Atu3871 18257b8a4b61bf0ef0ddb6d746155fdd 381 Gene3D G3DSA:3.20.20.70 4 381 2.0E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3871 18257b8a4b61bf0ef0ddb6d746155fdd 381 Pfam PF01070 FMN-dependent dehydrogenase 16 378 2.5E-126 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Atu3871 18257b8a4b61bf0ef0ddb6d746155fdd 381 PIRSF PIRSF000138 1 381 3.3E-132 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 163 9.1E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 SUPERFAMILY SSF52540 17 226 1.09E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 Gene3D G3DSA:1.10.3710.10 341 438 2.1E-33 T 14-10-2018 Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 SUPERFAMILY SSF48019 248 433 7.37E-76 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 Gene3D G3DSA:1.20.272.10 236 340 4.3E-44 T 14-10-2018 Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 Pfam PF16193 AAA C-terminal domain 187 262 1.2E-20 T 14-10-2018 IPR032423 AAA C-terminal domain Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 SMART SM00382 53 171 2.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 Gene3D G3DSA:3.40.50.300 10 167 2.0E-41 T 14-10-2018 Atu1914 9a626caa98ad606f0207d306ee20a4b1 438 Pfam PF12002 MgsA AAA+ ATPase C terminal 263 428 7.1E-68 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Atu8167 2da5c0e1c164c3be620bcc70b608c370 1127 Pfam PF13116 Protein of unknown function 457 740 4.5E-11 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 Atu4104 22942b5dc31577740b69b185406fa467 566 Gene3D G3DSA:2.40.50.140 448 534 1.6E-10 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PIRSF PIRSF002111 2 544 1.8E-191 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Atu4104 22942b5dc31577740b69b185406fa467 566 Gene3D G3DSA:2.40.50.140 105 188 3.5E-5 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 Gene3D G3DSA:2.40.50.140 12 104 7.1E-19 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 Pfam PF00575 S1 RNA binding domain 25 92 1.2E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu4104 22942b5dc31577740b69b185406fa467 566 Pfam PF00575 S1 RNA binding domain 280 353 1.7E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu4104 22942b5dc31577740b69b185406fa467 566 Pfam PF00575 S1 RNA binding domain 107 177 5.6E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu4104 22942b5dc31577740b69b185406fa467 566 Pfam PF00575 S1 RNA binding domain 195 266 1.3E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu4104 22942b5dc31577740b69b185406fa467 566 Pfam PF00575 S1 RNA binding domain 367 440 6.3E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu4104 22942b5dc31577740b69b185406fa467 566 Pfam PF00575 S1 RNA binding domain 457 530 2.2E-9 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu4104 22942b5dc31577740b69b185406fa467 566 Gene3D G3DSA:2.40.50.140 367 447 8.5E-21 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 Gene3D G3DSA:2.40.50.140 192 274 1.8E-29 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 SUPERFAMILY SSF50249 13 118 5.0E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4104 22942b5dc31577740b69b185406fa467 566 SUPERFAMILY SSF50249 451 543 6.36E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 114 130 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 90 109 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 296 315 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 45 59 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 336 354 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 161 181 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 218 239 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 132 149 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 PRINTS PR00681 Ribosomal protein S1 signature 27 45 3.4E-85 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 SUPERFAMILY SSF50249 195 283 5.65E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4104 22942b5dc31577740b69b185406fa467 566 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 10 530 1.4E-188 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Atu4104 22942b5dc31577740b69b185406fa467 566 SUPERFAMILY SSF50249 353 442 2.09E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4104 22942b5dc31577740b69b185406fa467 566 SUPERFAMILY SSF50249 108 191 1.49E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4104 22942b5dc31577740b69b185406fa467 566 SMART SM00316 368 440 1.8E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu4104 22942b5dc31577740b69b185406fa467 566 SMART SM00316 109 177 1.6E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu4104 22942b5dc31577740b69b185406fa467 566 SMART SM00316 281 353 8.4E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu4104 22942b5dc31577740b69b185406fa467 566 SMART SM00316 25 93 3.3E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu4104 22942b5dc31577740b69b185406fa467 566 SMART SM00316 457 530 5.8E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu4104 22942b5dc31577740b69b185406fa467 566 SMART SM00316 196 266 5.0E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu4104 22942b5dc31577740b69b185406fa467 566 Gene3D G3DSA:2.40.50.140 275 366 8.5E-30 T 14-10-2018 Atu4104 22942b5dc31577740b69b185406fa467 566 SUPERFAMILY SSF50249 261 361 5.28E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1915 3454203f44bc37a4a57c98d375737d0a 468 SUPERFAMILY SSF50156 379 466 1.09E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 Gene3D G3DSA:2.40.10.120 40 259 3.2E-75 T 14-10-2018 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 SMART SM00228 269 351 3.7E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 SMART SM00228 379 460 6.1E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 SUPERFAMILY SSF50494 39 253 4.18E-63 T 14-10-2018 IPR009003 Peptidase S1, PA clan Atu1915 3454203f44bc37a4a57c98d375737d0a 468 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 1.5E-50 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 1.5E-50 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 1.5E-50 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 1.5E-50 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 1.5E-50 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 1.5E-50 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 Pfam PF13365 Trypsin-like peptidase domain 94 229 1.6E-33 T 14-10-2018 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 Gene3D G3DSA:2.30.42.10 267 371 3.7E-23 T 14-10-2018 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 SUPERFAMILY SSF50156 219 363 5.26E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 465 8.8E-152 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 Pfam PF13180 PDZ domain 269 360 4.1E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 Pfam PF13180 PDZ domain 402 446 2.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu1915 3454203f44bc37a4a57c98d375737d0a 468 Gene3D G3DSA:2.30.42.10 376 466 3.6E-17 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 Gene3D G3DSA:3.50.50.60 6 308 2.6E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1013 f1d782db5592fea964c01596b0732e4b 405 SUPERFAMILY SSF55424 313 403 2.06E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu1013 f1d782db5592fea964c01596b0732e4b 405 Gene3D G3DSA:3.50.50.60 114 240 2.6E-104 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.1E-18 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 7.1E-18 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 7.1E-18 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 7.1E-18 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.3E-21 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.3E-21 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.3E-21 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.3E-21 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.3E-21 T 14-10-2018 Atu1013 f1d782db5592fea964c01596b0732e4b 405 Pfam PF14759 Reductase C-terminal 320 403 2.8E-29 T 14-10-2018 IPR028202 Reductase, C-terminal Atu1013 f1d782db5592fea964c01596b0732e4b 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 301 9.7E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu1013 f1d782db5592fea964c01596b0732e4b 405 SUPERFAMILY SSF51905 148 336 9.5E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1013 f1d782db5592fea964c01596b0732e4b 405 SUPERFAMILY SSF51905 4 189 2.51E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1013 f1d782db5592fea964c01596b0732e4b 405 Gene3D G3DSA:3.30.390.30 320 404 2.1E-28 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 3.4E-63 T 14-10-2018 Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 Gene3D G3DSA:3.40.50.720 1 248 2.2E-82 T 14-10-2018 Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 SUPERFAMILY SSF51735 6 248 2.8E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4877 4e97b05ffda52fd5f680ebf7afe1f769 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.6E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Pfam PF13426 PAS domain 219 320 4.0E-14 T 14-10-2018 IPR000014 PAS domain Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SMART SM00911 457 536 2.7E-27 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Gene3D G3DSA:3.30.450.20 206 334 1.7E-28 T 14-10-2018 Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SMART SM00091 330 396 2.2E-12 T 14-10-2018 IPR000014 PAS domain Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SMART SM00091 208 274 1.7E-9 T 14-10-2018 IPR000014 PAS domain Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SUPERFAMILY SSF55785 323 442 6.11E-27 T 14-10-2018 IPR035965 PAS domain superfamily Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 204 327 5.1E-25 T 14-10-2018 IPR000014 PAS domain Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 326 448 1.4E-30 T 14-10-2018 IPR000014 PAS domain Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SMART SM00086 280 322 3.2E-8 T 14-10-2018 IPR001610 PAC motif Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SMART SM00086 153 196 22.0 T 14-10-2018 IPR001610 PAC motif Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SMART SM00086 402 444 4.1E-7 T 14-10-2018 IPR001610 PAC motif Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SUPERFAMILY SSF55785 194 319 9.6E-29 T 14-10-2018 IPR035965 PAS domain superfamily Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Pfam PF00989 PAS fold 331 441 7.3E-20 T 14-10-2018 IPR013767 PAS fold GO:0006355 Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 SUPERFAMILY SSF55785 100 205 4.89E-7 T 14-10-2018 IPR035965 PAS domain superfamily Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Gene3D G3DSA:3.30.565.10 506 636 1.9E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Gene3D G3DSA:3.30.450.20 337 450 1.1E-31 T 14-10-2018 Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Pfam PF08448 PAS fold 101 197 7.6E-9 T 14-10-2018 IPR013656 PAS fold-4 Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Pfam PF07536 HWE histidine kinase 457 535 9.0E-23 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu5528 6c53dce0444d714fdc62aad86f9a4886 642 Gene3D G3DSA:3.30.450.20 84 205 2.3E-22 T 14-10-2018 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 9.6E-38 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 SUPERFAMILY SSF51735 123 290 6.65E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0589 a8e5b46548c9115947595d54fee75b6a 299 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 290 2.3E-62 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 269 277 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 Gene3D G3DSA:3.40.50.720 5 268 1.4E-100 T 14-10-2018 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 292 36.633 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 Gene3D G3DSA:3.40.50.10860 7 285 1.4E-100 T 14-10-2018 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 265 283 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 248 264 7.5E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Atu0589 a8e5b46548c9115947595d54fee75b6a 299 SUPERFAMILY SSF53223 1 121 1.34E-38 T 14-10-2018 Atu4542 d8125c3dcbaa1f2f6836dd74d207469c 265 SUPERFAMILY SSF53474 3 260 1.65E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4542 d8125c3dcbaa1f2f6836dd74d207469c 265 Gene3D G3DSA:3.40.50.1820 1 260 4.8E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4542 d8125c3dcbaa1f2f6836dd74d207469c 265 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 8.2E-113 T 14-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 Atu4542 d8125c3dcbaa1f2f6836dd74d207469c 265 Pfam PF12146 Serine aminopeptidase, S33 44 247 1.2E-15 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu4637 7be1342f47577a0856796f233c48798e 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 381 8.3E-95 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu4637 7be1342f47577a0856796f233c48798e 385 Gene3D G3DSA:1.10.287.470 119 191 7.7E-60 T 14-10-2018 Atu4637 7be1342f47577a0856796f233c48798e 385 Gene3D G3DSA:2.40.50.100 85 225 7.7E-60 T 14-10-2018 Atu4637 7be1342f47577a0856796f233c48798e 385 Gene3D G3DSA:2.40.30.170 73 306 7.7E-60 T 14-10-2018 Atu4637 7be1342f47577a0856796f233c48798e 385 Gene3D G3DSA:2.40.420.20 63 365 7.7E-60 T 14-10-2018 Atu4637 7be1342f47577a0856796f233c48798e 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 299 1.8E-23 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu4637 7be1342f47577a0856796f233c48798e 385 SUPERFAMILY SSF111369 75 300 7.85E-26 T 14-10-2018 Atu4153 1bffbf6dc1657c0c4c7ed9e0e5d9417f 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu4153 1bffbf6dc1657c0c4c7ed9e0e5d9417f 509 Gene3D G3DSA:3.40.605.10 33 484 2.9E-137 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4153 1bffbf6dc1657c0c4c7ed9e0e5d9417f 509 Gene3D G3DSA:3.40.309.10 266 459 2.9E-137 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu4153 1bffbf6dc1657c0c4c7ed9e0e5d9417f 509 Pfam PF00171 Aldehyde dehydrogenase family 31 487 1.1E-126 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4153 1bffbf6dc1657c0c4c7ed9e0e5d9417f 509 SUPERFAMILY SSF53720 28 495 9.95E-131 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4121 7e70ff9726739af5c38321a62480008b 340 Pfam PF00296 Luciferase-like monooxygenase 8 249 5.5E-25 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu4121 7e70ff9726739af5c38321a62480008b 340 Gene3D G3DSA:3.20.20.30 8 323 1.1E-44 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4121 7e70ff9726739af5c38321a62480008b 340 SUPERFAMILY SSF51679 7 333 7.98E-56 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4173 d0d239b932b6f8127525562192c5a149 755 Pfam PF13185 GAF domain 24 160 2.5E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu4173 d0d239b932b6f8127525562192c5a149 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 625 640 5.7E-16 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 5.7E-16 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 678 690 5.7E-16 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 642 657 5.7E-16 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 Pfam PF05524 PEP-utilising enzyme, N-terminal 185 303 2.5E-22 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Atu4173 d0d239b932b6f8127525562192c5a149 755 Gene3D G3DSA:1.10.274.10 202 324 7.2E-49 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Atu4173 d0d239b932b6f8127525562192c5a149 755 SUPERFAMILY SSF51621 427 724 1.81E-90 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu4173 d0d239b932b6f8127525562192c5a149 755 SUPERFAMILY SSF52009 302 422 1.07E-24 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Atu4173 d0d239b932b6f8127525562192c5a149 755 SUPERFAMILY SSF47831 200 320 1.26E-28 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Atu4173 d0d239b932b6f8127525562192c5a149 755 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 430 715 1.2E-87 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Atu4173 d0d239b932b6f8127525562192c5a149 755 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 625 643 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Atu4173 d0d239b932b6f8127525562192c5a149 755 Gene3D G3DSA:3.30.450.40 10 168 1.5E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4173 d0d239b932b6f8127525562192c5a149 755 Gene3D G3DSA:3.50.30.10 190 410 7.2E-49 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 SUPERFAMILY SSF55781 12 158 2.4E-27 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 SMART SM00065 24 170 5.7E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu4173 d0d239b932b6f8127525562192c5a149 755 Pfam PF00391 PEP-utilising enzyme, mobile domain 333 403 1.9E-14 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Atu4173 d0d239b932b6f8127525562192c5a149 755 Gene3D G3DSA:3.20.20.60 411 751 7.0E-94 T 14-10-2018 Atu4173 d0d239b932b6f8127525562192c5a149 755 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 184 731 3.0E-125 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Atu1883 550f1be0888860e07753ac4ac19738b6 274 SUPERFAMILY SSF48452 7 71 1.06E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu1883 550f1be0888860e07753ac4ac19738b6 274 SMART SM00028 12 45 7.6E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu1883 550f1be0888860e07753ac4ac19738b6 274 Pfam PF13489 Methyltransferase domain 106 248 4.2E-13 T 14-10-2018 Atu1883 550f1be0888860e07753ac4ac19738b6 274 Gene3D G3DSA:3.40.50.150 80 260 1.2E-26 T 14-10-2018 Atu1883 550f1be0888860e07753ac4ac19738b6 274 Pfam PF00515 Tetratricopeptide repeat 16 45 6.9E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Atu1883 550f1be0888860e07753ac4ac19738b6 274 SUPERFAMILY SSF53335 64 256 1.05E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1883 550f1be0888860e07753ac4ac19738b6 274 Gene3D G3DSA:1.25.40.10 1 69 4.6E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu4355 470adf5bfccf7ad757f239c02d64944d 518 Gene3D G3DSA:3.10.580.10 283 430 3.9E-41 T 14-10-2018 Atu4355 470adf5bfccf7ad757f239c02d64944d 518 SUPERFAMILY SSF54631 289 424 4.15E-22 T 14-10-2018 Atu4355 470adf5bfccf7ad757f239c02d64944d 518 SUPERFAMILY SSF56176 437 511 7.63E-18 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu4355 470adf5bfccf7ad757f239c02d64944d 518 SMART SM01091 435 515 2.3E-18 T 14-10-2018 IPR005170 Transporter-associated domain Atu4355 470adf5bfccf7ad757f239c02d64944d 518 Gene3D G3DSA:3.30.465.10 431 513 4.4E-23 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu4355 470adf5bfccf7ad757f239c02d64944d 518 Pfam PF03741 Integral membrane protein TerC family 14 203 9.4E-51 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Atu4355 470adf5bfccf7ad757f239c02d64944d 518 Pfam PF03471 Transporter associated domain 438 510 2.0E-17 T 14-10-2018 IPR005170 Transporter-associated domain Atu4355 470adf5bfccf7ad757f239c02d64944d 518 Pfam PF00571 CBS domain 372 421 3.1E-6 T 14-10-2018 IPR000644 CBS domain Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SUPERFAMILY SSF55785 20 121 9.77E-27 T 14-10-2018 IPR035965 PAS domain superfamily Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SMART SM00283 297 544 3.7E-96 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 360 511 9.4E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 124 5.9E-17 T 14-10-2018 IPR000014 PAS domain Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 247 1.8E-11 T 14-10-2018 IPR000014 PAS domain Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SMART SM00091 133 199 81.0 T 14-10-2018 IPR000014 PAS domain Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SMART SM00091 8 78 0.16 T 14-10-2018 IPR000014 PAS domain Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SMART SM00086 204 246 8.4E-5 T 14-10-2018 IPR001610 PAC motif Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SMART SM00086 83 124 2.4E-6 T 14-10-2018 IPR001610 PAC motif Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 347 1.9E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 1.9E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 1.9E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 1.9E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 Pfam PF08447 PAS fold 153 239 1.1E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 Pfam PF08447 PAS fold 33 118 5.7E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 Gene3D G3DSA:3.30.450.20 6 112 5.9E-21 T 14-10-2018 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SUPERFAMILY SSF55785 142 243 8.38E-24 T 14-10-2018 IPR035965 PAS domain superfamily Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 Gene3D G3DSA:1.10.287.950 247 546 5.7E-75 T 14-10-2018 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SUPERFAMILY SSF58104 264 545 4.1E-67 T 14-10-2018 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 SMART SM00304 244 296 7.5E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2618 ae7541e35b847f848554f55cb9ee19c5 590 Gene3D G3DSA:3.30.450.20 113 243 1.4E-24 T 14-10-2018 Atu0289 b94b335d91655440107a278b068c2bf8 429 SUPERFAMILY SSF53335 119 427 1.04E-67 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0289 b94b335d91655440107a278b068c2bf8 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 230 424 4.8E-43 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Atu0289 b94b335d91655440107a278b068c2bf8 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 207 221 5.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu0289 b94b335d91655440107a278b068c2bf8 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 301 313 5.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu0289 b94b335d91655440107a278b068c2bf8 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 236 246 5.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu0289 b94b335d91655440107a278b068c2bf8 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 351 367 5.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu0289 b94b335d91655440107a278b068c2bf8 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 5.2E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu0289 b94b335d91655440107a278b068c2bf8 429 Gene3D G3DSA:3.40.50.150 121 427 4.0E-76 T 14-10-2018 Atu0289 b94b335d91655440107a278b068c2bf8 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 300 311 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Atu2140 b082ec2a57dc556bb3fc46f1c5b20dc2 88 SUPERFAMILY SSF88723 11 82 5.89E-9 T 14-10-2018 IPR029060 PIN-like domain superfamily Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Gene3D G3DSA:1.20.120.330 314 472 2.3E-53 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Gene3D G3DSA:3.30.460.100 70 308 5.1E-56 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Gene3D G3DSA:3.30.460.100 589 831 2.6E-67 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 SUPERFAMILY SSF81593 835 982 1.96E-22 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Pfam PF08335 GlnD PII-uridylyltransferase 327 468 5.4E-40 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 SUPERFAMILY SSF81301 552 833 3.6E-78 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 SUPERFAMILY SSF81301 43 315 1.63E-63 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 SUPERFAMILY SSF81593 316 468 7.77E-44 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Gene3D G3DSA:1.20.120.1510 480 588 9.0E-6 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 581 821 4.6E-73 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 58 306 9.0E-58 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Gene3D G3DSA:1.20.120.330 832 935 8.5E-11 T 14-10-2018 Atu0981 8a170bc9d87183e1e774cabe20774f7d 988 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 53 971 18.23 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Atu1977 5316da86c400ba590517aafa05a7cf29 457 Pfam PF01593 Flavin containing amine oxidoreductase 22 308 7.0E-22 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Atu1977 5316da86c400ba590517aafa05a7cf29 457 Gene3D G3DSA:3.90.660.10 49 216 5.2E-29 T 14-10-2018 Atu1977 5316da86c400ba590517aafa05a7cf29 457 Gene3D G3DSA:1.10.405.10 112 208 5.2E-29 T 14-10-2018 Atu1977 5316da86c400ba590517aafa05a7cf29 457 Gene3D G3DSA:3.50.50.60 15 278 5.2E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1977 5316da86c400ba590517aafa05a7cf29 457 SUPERFAMILY SSF51905 14 422 7.45E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0647 10dba6db0d14b18d669e70438cd628e6 423 SUPERFAMILY SSF51246 324 419 2.62E-30 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 SUPERFAMILY SSF52440 1 101 3.88E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Gene3D G3DSA:3.30.1490.20 119 187 1.5E-23 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 SUPERFAMILY SSF56059 102 321 8.84E-58 T 14-10-2018 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Gene3D G3DSA:3.30.470.20 188 325 9.3E-58 T 14-10-2018 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Gene3D G3DSA:3.40.50.20 1 93 4.9E-37 T 14-10-2018 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 SMART SM01210 326 418 1.8E-51 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 3.5E-36 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 43.09 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 415 1.9E-27 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 2.3E-165 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Gene3D G3DSA:3.90.600.10 326 423 9.4E-34 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 SMART SM01209 101 292 4.3E-129 T 14-10-2018 Atu0647 10dba6db0d14b18d669e70438cd628e6 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 3.6E-78 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 255 437 2.9E-54 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 SUPERFAMILY SSF52317 256 447 5.38E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 Gene3D G3DSA:3.40.50.300 4 241 4.6E-50 T 14-10-2018 Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 Gene3D G3DSA:3.40.50.880 255 406 4.2E-13 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 479 7.4E-128 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 SUPERFAMILY SSF52540 1 238 1.4E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 485 190.022 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Atu2808 2733b196618ee9ad0ec582fd4ccd6ece 485 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 238 5.3E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SMART SM01096 480 602 1.3E-69 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SUPERFAMILY SSF52335 1026 1161 1.44E-39 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Gene3D G3DSA:3.40.50.1380 1027 1162 4.5E-39 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Gene3D G3DSA:3.40.50.20 1 116 2.1E-49 T 14-10-2018 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 738 802 3.0E-7 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 828 960 2.9E-18 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 203 387 5.2E-64 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SUPERFAMILY SSF56059 200 454 3.89E-100 T 14-10-2018 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Gene3D G3DSA:1.10.1030.10 458 605 7.9E-44 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SMART SM00851 1046 1132 6.5E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 195 1143 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Gene3D G3DSA:3.30.470.20 188 456 5.2E-114 T 14-10-2018 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1152 13.097 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SUPERFAMILY SSF52440 1 127 1.02E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 774 788 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 924 931 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 483 602 2.7E-40 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Gene3D G3DSA:3.40.50.20 614 727 2.1E-47 T 14-10-2018 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Gene3D G3DSA:3.30.470.20 730 1026 1.7E-102 T 14-10-2018 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 Pfam PF02142 MGS-like domain 1047 1132 1.5E-20 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SUPERFAMILY SSF48108 449 604 9.68E-48 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 660 670 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 869 886 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 835 854 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 924 953 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 778 790 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 631 645 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 1003 1021 1.6E-29 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SUPERFAMILY SSF52440 618 740 8.49E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 SUPERFAMILY SSF56059 738 1024 8.84E-91 T 14-10-2018 Atu2178 321357da8d64a4fcfcd68c3d82347662 1162 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 350 357 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2747 6e3bfda5fc4503c4d466f03e52a90b9a 220 PIRSF PIRSF004848 2 220 8.9E-63 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atu2747 6e3bfda5fc4503c4d466f03e52a90b9a 220 Gene3D G3DSA:3.20.20.10 1 220 1.1E-81 T 14-10-2018 IPR029066 PLP-binding barrel Atu2747 6e3bfda5fc4503c4d466f03e52a90b9a 220 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 219 25.984 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atu2747 6e3bfda5fc4503c4d466f03e52a90b9a 220 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 220 5.5E-53 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Atu2747 6e3bfda5fc4503c4d466f03e52a90b9a 220 SUPERFAMILY SSF51419 2 218 1.29E-71 T 14-10-2018 IPR029066 PLP-binding barrel Atu2747 6e3bfda5fc4503c4d466f03e52a90b9a 220 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.8E-23 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu2184 d24279b0fc83926dad37913c3786b807 196 Gene3D G3DSA:3.30.70.920 101 184 6.0E-18 T 14-10-2018 Atu2184 d24279b0fc83926dad37913c3786b807 196 Gene3D G3DSA:1.10.10.10 41 100 1.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2184 d24279b0fc83926dad37913c3786b807 196 Pfam PF13412 Winged helix-turn-helix DNA-binding 47 94 9.8E-21 T 14-10-2018 Atu2184 d24279b0fc83926dad37913c3786b807 196 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 63 74 4.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu2184 d24279b0fc83926dad37913c3786b807 196 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 47 63 4.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu2184 d24279b0fc83926dad37913c3786b807 196 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 74 93 4.3E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu2184 d24279b0fc83926dad37913c3786b807 196 SUPERFAMILY SSF46785 46 107 2.81E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2184 d24279b0fc83926dad37913c3786b807 196 Pfam PF01037 Lrp/AsnC ligand binding domain 114 186 2.6E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu2184 d24279b0fc83926dad37913c3786b807 196 SMART SM00344 47 156 4.0E-36 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu2184 d24279b0fc83926dad37913c3786b807 196 SUPERFAMILY SSF54909 107 191 8.45E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3629 00854201e1f211ad66b9d5737624e2fc 331 Pfam PF00589 Phage integrase family 124 310 5.8E-42 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atu3629 00854201e1f211ad66b9d5737624e2fc 331 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 10 324 63.551 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Atu3629 00854201e1f211ad66b9d5737624e2fc 331 Gene3D G3DSA:1.10.443.10 117 318 2.9E-51 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu3629 00854201e1f211ad66b9d5737624e2fc 331 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 96 1.9E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atu3629 00854201e1f211ad66b9d5737624e2fc 331 Gene3D G3DSA:1.10.150.130 10 104 1.6E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Atu3629 00854201e1f211ad66b9d5737624e2fc 331 SUPERFAMILY SSF56349 14 316 2.44E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu3629 00854201e1f211ad66b9d5737624e2fc 331 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 12 324 52.132 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Atu4441 08006fbc7aaef8687d59b91ea507f610 465 Pfam PF01425 Amidase 29 439 3.5E-84 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu4441 08006fbc7aaef8687d59b91ea507f610 465 Gene3D G3DSA:3.90.1300.10 2 457 1.2E-115 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu4441 08006fbc7aaef8687d59b91ea507f610 465 SUPERFAMILY SSF75304 1 459 2.09E-118 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu3608 6b00d02fb08bfaaf65c927721553c058 243 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 37 186 2.0E-6 T 14-10-2018 Atu3608 6b00d02fb08bfaaf65c927721553c058 243 Pfam PF02698 DUF218 domain 68 208 4.2E-14 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Atu1373 5dc69beff0389b31ef94872aa3386aaf 280 Pfam PF08904 Domain of unknown function (DUF1849) 29 269 3.2E-89 T 14-10-2018 IPR015000 Protein of unknown function DUF1849 Atu4644 344ed36a8b9bd81b442263a5aa7beedc 289 SUPERFAMILY SSF46689 227 275 1.66E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4644 344ed36a8b9bd81b442263a5aa7beedc 289 Pfam PF12833 Helix-turn-helix domain 194 272 5.8E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4644 344ed36a8b9bd81b442263a5aa7beedc 289 Gene3D G3DSA:1.10.10.60 171 275 8.8E-24 T 14-10-2018 Atu4644 344ed36a8b9bd81b442263a5aa7beedc 289 SMART SM00342 188 271 3.7E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 SUPERFAMILY SSF88946 11 94 7.46E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 Gene3D G3DSA:1.10.1740.10 2 85 1.0E-21 T 14-10-2018 Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 Pfam PF08281 Sigma-70, region 4 108 160 9.2E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 Gene3D G3DSA:1.10.10.10 103 168 4.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 SUPERFAMILY SSF88659 104 164 1.0E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 164 1.3E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 37 68 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu4160 1e0bd1a86215ce92ff386e2c7fa2448f 188 Pfam PF04542 Sigma-70 region 2 20 82 5.2E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 SMART SM00138 26 294 2.7E-134 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 Pfam PF03705 CheR methyltransferase, all-alpha domain 28 77 2.4E-12 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 Pfam PF01739 CheR methyltransferase, SAM binding domain 94 291 6.1E-73 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 Gene3D G3DSA:1.10.155.10 17 92 4.0E-18 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PIRSF PIRSF000410 9 294 6.4E-109 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 SUPERFAMILY SSF53335 94 278 3.4E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 SUPERFAMILY SSF47757 20 93 2.09E-15 T 14-10-2018 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PRINTS PR00996 Glutamate methyltransferase family signature 252 275 6.4E-50 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PRINTS PR00996 Glutamate methyltransferase family signature 127 147 6.4E-50 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PRINTS PR00996 Glutamate methyltransferase family signature 48 61 6.4E-50 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PRINTS PR00996 Glutamate methyltransferase family signature 162 178 6.4E-50 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PRINTS PR00996 Glutamate methyltransferase family signature 87 99 6.4E-50 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 PRINTS PR00996 Glutamate methyltransferase family signature 233 247 6.4E-50 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Atu0518 d00115b2b1815af3a8a7fa493efca6d6 302 Gene3D G3DSA:3.40.50.150 93 293 1.9E-61 T 14-10-2018 Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 SUPERFAMILY SSF51604 119 367 1.44E-65 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 Gene3D G3DSA:3.30.390.10 1 128 2.3E-40 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 SUPERFAMILY SSF54826 1 134 1.11E-31 T 14-10-2018 Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 SMART SM00922 152 250 1.3E-22 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 Pfam PF13378 Enolase C-terminal domain-like 159 359 6.7E-59 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 Gene3D G3DSA:3.20.20.120 129 360 1.0E-97 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4120 80c332fff528b9baee02af3f4e39a1b6 372 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 18 131 3.1E-16 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu5101 44e43ae62601ed299a277db1347c17a8 95 Pfam PF07215 Protein of unknown function (DUF1419) 13 95 3.2E-31 T 14-10-2018 IPR009862 Protein of unknown function DUF1419 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 Pfam PF00085 Thioredoxin 35 137 1.1E-26 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 Pfam PF14561 Tetratricopeptide repeat 234 321 8.8E-28 T 14-10-2018 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 Gene3D G3DSA:3.40.30.10 34 140 3.3E-29 T 14-10-2018 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 PRINTS PR00421 Thioredoxin family signature 63 72 3.2E-6 T 14-10-2018 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 PRINTS PR00421 Thioredoxin family signature 103 114 3.2E-6 T 14-10-2018 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 PRINTS PR00421 Thioredoxin family signature 55 63 3.2E-6 T 14-10-2018 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 Pfam PF14559 Tetratricopeptide repeat 160 221 7.2E-15 T 14-10-2018 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 Gene3D G3DSA:1.25.40.10 148 233 2.8E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 TIGRFAM TIGR01068 thioredoxin: thioredoxin 50 137 8.1E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 SUPERFAMILY SSF52833 29 139 3.71E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 Gene3D G3DSA:1.25.40.10 238 321 8.4E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 SUPERFAMILY SSF48452 157 284 4.01E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3698 55335b6b459f526c1ea9bce76b15e6d2 322 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atu2259 5404b2ad68e405f544fe25b8af765482 437 Pfam PF07690 Major Facilitator Superfamily 34 395 1.2E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2259 5404b2ad68e405f544fe25b8af765482 437 Gene3D G3DSA:1.20.1250.20 17 437 7.3E-72 T 14-10-2018 Atu2259 5404b2ad68e405f544fe25b8af765482 437 SUPERFAMILY SSF103473 9 434 4.84E-68 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2259 5404b2ad68e405f544fe25b8af765482 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 324 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 Pfam PF07715 TonB-dependent Receptor Plug Domain 154 260 3.9E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 Pfam PF00593 TonB dependent receptor 389 810 3.3E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 SMART SM00965 71 122 8.0E-10 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 Pfam PF07660 Secretin and TonB N terminus short domain 71 120 7.0E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 SUPERFAMILY SSF56935 131 812 6.11E-108 T 14-10-2018 Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 Gene3D G3DSA:2.40.170.20 149 812 1.3E-115 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atu3687 3b99f28f4fc72ffa8b95a5c4f8636a52 812 Gene3D G3DSA:3.55.50.30 40 148 9.8E-24 T 14-10-2018 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 SUPERFAMILY SSF54909 64 149 1.61E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0740 68d1dfe6814c3668f543998feed4b19d 150 Gene3D G3DSA:3.30.70.920 55 150 5.9E-16 T 14-10-2018 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.5E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.5E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.5E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 SMART SM00344 1 110 2.3E-24 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 Pfam PF13404 AsnC-type helix-turn-helix domain 1 41 1.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0740 68d1dfe6814c3668f543998feed4b19d 150 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 4.8E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu0740 68d1dfe6814c3668f543998feed4b19d 150 SUPERFAMILY SSF46785 1 60 2.63E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0740 68d1dfe6814c3668f543998feed4b19d 150 Gene3D G3DSA:1.10.10.10 1 54 7.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0740 68d1dfe6814c3668f543998feed4b19d 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu3238 da56568ad2fedf7db4cdad42397f2488 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 305 2.0E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3238 da56568ad2fedf7db4cdad42397f2488 310 Gene3D G3DSA:1.10.3720.10 70 309 2.0E-61 T 14-10-2018 IPR035906 MetI-like superfamily Atu3238 da56568ad2fedf7db4cdad42397f2488 310 SUPERFAMILY SSF161098 74 298 1.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily Atu2084 7cf5059c4e634d6635720604edf6604a 288 SUPERFAMILY SSF48452 44 151 7.59E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2084 7cf5059c4e634d6635720604edf6604a 288 Pfam PF13525 Outer membrane lipoprotein 48 243 2.0E-50 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Atu2084 7cf5059c4e634d6635720604edf6604a 288 Gene3D G3DSA:1.25.40.10 48 261 5.6E-51 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2084 7cf5059c4e634d6635720604edf6604a 288 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 18 256 1.8E-81 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD Atu2084 7cf5059c4e634d6635720604edf6604a 288 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 15 250 34.692 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD Atu4576 75376cb02d38d5ebb17a500c76cf7251 357 Pfam PF00480 ROK family 66 294 4.4E-22 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu4576 75376cb02d38d5ebb17a500c76cf7251 357 SUPERFAMILY SSF53067 58 340 1.25E-36 T 14-10-2018 Atu4576 75376cb02d38d5ebb17a500c76cf7251 357 Gene3D G3DSA:1.10.10.10 1 51 2.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4576 75376cb02d38d5ebb17a500c76cf7251 357 Gene3D G3DSA:3.30.420.40 189 313 1.7E-13 T 14-10-2018 Atu4576 75376cb02d38d5ebb17a500c76cf7251 357 Gene3D G3DSA:3.30.420.40 53 188 2.9E-25 T 14-10-2018 Atu4576 75376cb02d38d5ebb17a500c76cf7251 357 SUPERFAMILY SSF46785 1 52 3.24E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3039 284be322bc457d3d7598721c50fb37ff 518 Gene3D G3DSA:3.30.420.40 1 84 2.0E-6 T 14-10-2018 Atu3039 284be322bc457d3d7598721c50fb37ff 518 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 172 6.1E-40 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu3039 284be322bc457d3d7598721c50fb37ff 518 SUPERFAMILY SSF53067 2 80 5.89E-8 T 14-10-2018 Atu3039 284be322bc457d3d7598721c50fb37ff 518 SUPERFAMILY SSF53067 268 443 6.48E-21 T 14-10-2018 Atu3039 284be322bc457d3d7598721c50fb37ff 518 Pfam PF01968 Hydantoinase/oxoprolinase 192 393 1.7E-32 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 7 405 52.056 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 13 21 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 Gene3D G3DSA:3.90.1260.10 68 360 6.4E-153 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 Pfam PF00764 Arginosuccinate synthase 11 399 1.7E-152 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 9 401 2.6E-140 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 SUPERFAMILY SSF69864 178 405 4.71E-88 T 14-10-2018 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 Gene3D G3DSA:1.20.5.470 380 404 6.8E-11 T 14-10-2018 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 Gene3D G3DSA:3.40.50.620 10 176 6.4E-153 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 SUPERFAMILY SSF52402 8 171 1.43E-50 T 14-10-2018 Atu2667 b3e769048dbcbf008d91f9cb67cfab94 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu4085 956cf0c249de37a0198dfc595940df9c 297 Gene3D G3DSA:1.10.1040.10 166 291 1.1E-31 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu4085 956cf0c249de37a0198dfc595940df9c 297 Gene3D G3DSA:3.40.50.720 1 165 2.5E-46 T 14-10-2018 Atu4085 956cf0c249de37a0198dfc595940df9c 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 165 4.5E-39 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu4085 956cf0c249de37a0198dfc595940df9c 297 SUPERFAMILY SSF48179 166 289 3.74E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu4085 956cf0c249de37a0198dfc595940df9c 297 SUPERFAMILY SSF51735 5 167 4.15E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4085 956cf0c249de37a0198dfc595940df9c 297 PIRSF PIRSF000103 1 294 1.3E-62 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atu4085 956cf0c249de37a0198dfc595940df9c 297 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.8E-28 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Atu2765 44eeb9e982e3f1811fc74ca8661e6318 189 Gene3D G3DSA:1.20.58.1290 75 169 1.3E-25 T 14-10-2018 Atu2765 44eeb9e982e3f1811fc74ca8661e6318 189 Gene3D G3DSA:2.30.30.840 3 74 2.5E-24 T 14-10-2018 Atu2765 44eeb9e982e3f1811fc74ca8661e6318 189 SUPERFAMILY SSF141259 11 79 2.62E-15 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Atu2765 44eeb9e982e3f1811fc74ca8661e6318 189 Pfam PF02559 CarD-like/TRCF domain 14 122 8.4E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain Atu2765 44eeb9e982e3f1811fc74ca8661e6318 189 SMART SM01058 13 123 2.4E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain Atu4634 9893039d0dab2835c653449d6cb35b8b 214 Gene3D G3DSA:1.20.58.220 15 213 1.5E-49 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu4634 9893039d0dab2835c653449d6cb35b8b 214 Pfam PF01865 Protein of unknown function DUF47 4 212 1.9E-56 T 14-10-2018 IPR018445 Putative phosphate transport regulator Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 SUPERFAMILY SSF51735 4 226 1.75E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.2E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.2E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.2E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.2E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 9.2E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 187 1.4E-4 T 14-10-2018 Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 Gene3D G3DSA:3.40.50.720 3 239 4.5E-71 T 14-10-2018 Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 Pfam PF00106 short chain dehydrogenase 5 194 7.0E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 PIRSF PIRSF000126 2 234 1.3E-50 T 14-10-2018 Atu0857 252484fc61b2153f6ed12cd0972c9aef 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu2664 004f9bc81b44e5e736aa7d82eefb8233 686 Gene3D G3DSA:1.10.1370.10 149 616 1.1E-223 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Atu2664 004f9bc81b44e5e736aa7d82eefb8233 686 SUPERFAMILY SSF55486 18 681 2.87E-184 T 14-10-2018 Atu2664 004f9bc81b44e5e736aa7d82eefb8233 686 Gene3D G3DSA:1.10.1370.40 22 681 1.1E-223 T 14-10-2018 Atu2664 004f9bc81b44e5e736aa7d82eefb8233 686 Pfam PF01432 Peptidase family M3 233 682 4.6E-119 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Atu4286 e9975511fea9fd1d396d08244af17779 279 Gene3D G3DSA:3.40.50.880 10 279 1.2E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4286 e9975511fea9fd1d396d08244af17779 279 Pfam PF17124 ThiJ/PfpI family-like 44 187 3.3E-14 T 14-10-2018 IPR032633 ThiJ/PfpI family-like Atu4286 e9975511fea9fd1d396d08244af17779 279 SUPERFAMILY SSF52317 24 278 1.28E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0682 85095a060a8b0f40516196b7e4276a10 544 Gene3D G3DSA:3.30.260.10 136 410 2.5E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Atu0682 85095a060a8b0f40516196b7e4276a10 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.7E-255 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 PRINTS PR00298 60kDa chaperonin signature 27 53 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 PRINTS PR00298 60kDa chaperonin signature 83 110 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 SUPERFAMILY SSF54849 138 203 3.2E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Atu0682 85095a060a8b0f40516196b7e4276a10 544 Gene3D G3DSA:3.50.7.10 192 372 2.5E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Atu0682 85095a060a8b0f40516196b7e4276a10 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu0682 85095a060a8b0f40516196b7e4276a10 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.5E-100 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Atu0682 85095a060a8b0f40516196b7e4276a10 544 SUPERFAMILY SSF48592 7 521 2.5E-76 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Atu0682 85095a060a8b0f40516196b7e4276a10 544 SUPERFAMILY SSF52029 184 376 4.34E-86 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Atu0682 85095a060a8b0f40516196b7e4276a10 544 Gene3D G3DSA:1.10.560.10 8 521 2.5E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Atu0682 85095a060a8b0f40516196b7e4276a10 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 542 42.07 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Atu4034 72f935c47e83897975502b9e9524a422 411 Gene3D G3DSA:3.30.450.40 12 180 2.1E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4034 72f935c47e83897975502b9e9524a422 411 SUPERFAMILY SSF55874 308 405 7.47E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4034 72f935c47e83897975502b9e9524a422 411 SMART SM00065 25 176 0.0036 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu4034 72f935c47e83897975502b9e9524a422 411 Gene3D G3DSA:3.30.565.10 279 404 1.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4034 72f935c47e83897975502b9e9524a422 411 Pfam PF07730 Histidine kinase 206 267 1.5E-4 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Atu4034 72f935c47e83897975502b9e9524a422 411 SUPERFAMILY SSF55781 12 164 4.8E-12 T 14-10-2018 Atu4034 72f935c47e83897975502b9e9524a422 411 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 358 5.2E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4034 72f935c47e83897975502b9e9524a422 411 SMART SM00387 311 404 1.0E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu8052 479e124702a8723f12abec6175511406 45 Gene3D G3DSA:1.20.1260.10 1 42 1.5E-7 T 14-10-2018 IPR012347 Ferritin-like Atu8052 479e124702a8723f12abec6175511406 45 SUPERFAMILY SSF47240 1 32 5.68E-7 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu8052 479e124702a8723f12abec6175511406 45 Pfam PF05974 Domain of unknown function (DUF892) 5 35 2.2E-7 T 14-10-2018 IPR010287 Domain of unknown function DUF892 Atu2724 1480d78b52c66d5983990ba669fda5d6 396 SUPERFAMILY SSF103473 12 388 1.05E-47 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2724 1480d78b52c66d5983990ba669fda5d6 396 Gene3D G3DSA:1.20.1250.20 22 204 3.2E-21 T 14-10-2018 Atu2724 1480d78b52c66d5983990ba669fda5d6 396 Gene3D G3DSA:1.20.1250.20 212 390 5.2E-20 T 14-10-2018 Atu2724 1480d78b52c66d5983990ba669fda5d6 396 Pfam PF07690 Major Facilitator Superfamily 25 354 5.6E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu5506 36452d885831d917ab88c040f211d511 452 Gene3D G3DSA:3.30.565.10 305 451 8.1E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5506 36452d885831d917ab88c040f211d511 452 Gene3D G3DSA:1.10.287.130 193 304 5.0E-7 T 14-10-2018 Atu5506 36452d885831d917ab88c040f211d511 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5506 36452d885831d917ab88c040f211d511 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5506 36452d885831d917ab88c040f211d511 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu5506 36452d885831d917ab88c040f211d511 452 SUPERFAMILY SSF55874 311 450 1.2E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5506 36452d885831d917ab88c040f211d511 452 SMART SM00387 346 452 6.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu5506 36452d885831d917ab88c040f211d511 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 451 1.9E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 SUPERFAMILY SSF46785 5 115 2.72E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 SUPERFAMILY SSF53850 97 304 5.5E-28 T 14-10-2018 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 Gene3D G3DSA:3.40.190.10 98 287 8.5E-38 T 14-10-2018 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 Gene3D G3DSA:3.40.190.10 171 273 8.5E-38 T 14-10-2018 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 Gene3D G3DSA:1.10.10.10 5 93 1.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 4 301 2.1E-139 T 14-10-2018 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 Atu4543 274e67c5a1ff0653d52d9adb7ba107d2 311 Pfam PF03466 LysR substrate binding domain 97 301 1.1E-25 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4453 9c83246880600a166be7b45a455b4d86 525 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 276 474 3.2E-45 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atu4453 9c83246880600a166be7b45a455b4d86 525 SUPERFAMILY SSF53067 6 262 4.59E-52 T 14-10-2018 Atu4453 9c83246880600a166be7b45a455b4d86 525 Gene3D G3DSA:3.30.420.40 7 497 3.7E-154 T 14-10-2018 Atu4453 9c83246880600a166be7b45a455b4d86 525 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 6 521 9.5E-146 T 14-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 Atu4453 9c83246880600a166be7b45a455b4d86 525 PIRSF PIRSF000538 3 525 6.3E-75 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu4453 9c83246880600a166be7b45a455b4d86 525 Gene3D G3DSA:3.30.420.460 318 510 3.7E-154 T 14-10-2018 Atu4453 9c83246880600a166be7b45a455b4d86 525 SUPERFAMILY SSF53067 274 522 5.18E-53 T 14-10-2018 Atu4453 9c83246880600a166be7b45a455b4d86 525 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 261 3.6E-30 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu1551 4fbbce4983885d33890b6e0f76c0349f 142 Pfam PF02566 OsmC-like protein 44 137 7.9E-17 T 14-10-2018 IPR003718 OsmC/Ohr family Atu1551 4fbbce4983885d33890b6e0f76c0349f 142 Gene3D G3DSA:3.30.300.20 22 141 2.4E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu1551 4fbbce4983885d33890b6e0f76c0349f 142 SUPERFAMILY SSF82784 16 139 1.96E-24 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Atu2114 d21f74590d5ea2f3568997ab217db89e 245 SUPERFAMILY SSF46565 167 240 2.54E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu2114 d21f74590d5ea2f3568997ab217db89e 245 Gene3D G3DSA:1.10.3680.10 26 166 1.1E-19 T 14-10-2018 IPR029024 TerB-like Atu2114 d21f74590d5ea2f3568997ab217db89e 245 SMART SM00271 178 243 5.7E-15 T 14-10-2018 IPR001623 DnaJ domain Atu2114 d21f74590d5ea2f3568997ab217db89e 245 SUPERFAMILY SSF158682 21 191 1.7E-30 T 14-10-2018 IPR029024 TerB-like Atu2114 d21f74590d5ea2f3568997ab217db89e 245 Gene3D G3DSA:1.10.287.110 167 245 3.4E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu2114 d21f74590d5ea2f3568997ab217db89e 245 Pfam PF00226 DnaJ domain 179 241 9.8E-9 T 14-10-2018 IPR001623 DnaJ domain Atu2114 d21f74590d5ea2f3568997ab217db89e 245 Pfam PF05099 Tellurite resistance protein TerB 43 169 2.6E-31 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Atu2114 d21f74590d5ea2f3568997ab217db89e 245 PRINTS PR00625 DnaJ domain signature 223 243 5.0E-6 T 14-10-2018 IPR001623 DnaJ domain Atu2114 d21f74590d5ea2f3568997ab217db89e 245 PRINTS PR00625 DnaJ domain signature 181 199 5.0E-6 T 14-10-2018 IPR001623 DnaJ domain Atu2114 d21f74590d5ea2f3568997ab217db89e 245 PRINTS PR00625 DnaJ domain signature 199 214 5.0E-6 T 14-10-2018 IPR001623 DnaJ domain Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 Pfam PF00005 ABC transporter 25 168 6.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 SUPERFAMILY SSF52540 4 249 7.58E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 SMART SM00382 34 226 7.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 Gene3D G3DSA:2.40.50.100 246 346 1.8E-9 T 14-10-2018 Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 Gene3D G3DSA:2.40.50.140 295 338 1.8E-9 T 14-10-2018 Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 Gene3D G3DSA:3.40.50.300 1 245 2.3E-63 T 14-10-2018 Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 SUPERFAMILY SSF50331 243 348 1.14E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3895 d28fbcd11996314cc6550694ed90f4b8 356 Pfam PF08402 TOBE domain 281 343 1.2E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu2430 c7e8594a009552001d3e17de5cecc9c5 91 Pfam PF06627 Protein of unknown function (DUF1153) 8 90 3.1E-42 T 14-10-2018 IPR009534 Protein of unknown function DUF1153 Atu2430 c7e8594a009552001d3e17de5cecc9c5 91 Gene3D G3DSA:1.10.10.10 10 91 3.3E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2430 c7e8594a009552001d3e17de5cecc9c5 91 SUPERFAMILY SSF48295 12 90 2.56E-20 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu3463 f1426e708b87ef43fb4cfaff99323a9d 275 Gene3D G3DSA:3.40.50.1820 1 274 2.6E-77 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3463 f1426e708b87ef43fb4cfaff99323a9d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 4.5E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3463 f1426e708b87ef43fb4cfaff99323a9d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 4.5E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3463 f1426e708b87ef43fb4cfaff99323a9d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 4.5E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3463 f1426e708b87ef43fb4cfaff99323a9d 275 Pfam PF00561 alpha/beta hydrolase fold 24 255 6.1E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3463 f1426e708b87ef43fb4cfaff99323a9d 275 SUPERFAMILY SSF53474 2 274 4.4E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4025 81f36e2dd4431fe801c53f4e63f684e5 269 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4025 81f36e2dd4431fe801c53f4e63f684e5 269 SMART SM00382 40 228 5.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4025 81f36e2dd4431fe801c53f4e63f684e5 269 Pfam PF00005 ABC transporter 32 179 2.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4025 81f36e2dd4431fe801c53f4e63f684e5 269 SUPERFAMILY SSF52540 14 244 2.15E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4025 81f36e2dd4431fe801c53f4e63f684e5 269 Gene3D G3DSA:3.40.50.300 7 266 7.5E-64 T 14-10-2018 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 Gene3D G3DSA:3.40.50.2300 65 325 4.9E-69 T 14-10-2018 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 SUPERFAMILY SSF53822 65 335 8.41E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 SUPERFAMILY SSF47413 4 62 3.56E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 SMART SM00354 4 74 1.3E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 Pfam PF13377 Periplasmic binding protein-like domain 172 333 8.5E-37 T 14-10-2018 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 Gene3D G3DSA:1.10.260.40 1 61 1.3E-13 T 14-10-2018 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 51 2.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4505 69761ad7fc3feb9ca2d7149174f0e50f 340 Gene3D G3DSA:3.40.50.2300 164 330 4.9E-69 T 14-10-2018 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 Gene3D G3DSA:3.30.66.10 16 98 3.6E-29 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 241 255 2.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 156 170 2.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 133 152 2.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 288 299 2.6E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 Gene3D G3DSA:3.90.15.10 124 242 3.1E-65 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 Gene3D G3DSA:1.10.132.120 101 334 3.1E-65 T 14-10-2018 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 SUPERFAMILY SSF55869 33 93 5.23E-20 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 SUPERFAMILY SSF56349 89 310 1.59E-55 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu4036 9c3c0cbd77fb69d4b6a49e7aa3342bf5 338 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 99 263 1.4E-19 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Atu3460 12d429dc8790849b9d4a91cdfcf594b3 210 PIRSF PIRSF006324 2 207 2.3E-51 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu3460 12d429dc8790849b9d4a91cdfcf594b3 210 Pfam PF01810 LysE type translocator 15 204 3.2E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 Gene3D G3DSA:3.90.180.10 9 362 2.5E-131 T 14-10-2018 Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 Pfam PF00107 Zinc-binding dehydrogenase 199 306 1.5E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 SUPERFAMILY SSF51735 160 334 2.63E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 Gene3D G3DSA:3.40.50.720 176 311 2.5E-131 T 14-10-2018 Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 SMART SM00829 15 365 2.7E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 SUPERFAMILY SSF50129 5 195 6.39E-60 T 14-10-2018 IPR011032 GroES-like superfamily Atu5202 cc7e2e573ccc1ea576b51ee4be0b6d4e 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 128 1.3E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu3450 dc3c6c33ba47837b1c745906bbe0a3c3 435 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 427 3.0E-116 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3450 dc3c6c33ba47837b1c745906bbe0a3c3 435 Pfam PF00296 Luciferase-like monooxygenase 29 386 5.1E-51 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3450 dc3c6c33ba47837b1c745906bbe0a3c3 435 Gene3D G3DSA:3.20.20.30 1 435 5.4E-121 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3450 dc3c6c33ba47837b1c745906bbe0a3c3 435 SUPERFAMILY SSF51679 5 434 1.18E-101 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3450 dc3c6c33ba47837b1c745906bbe0a3c3 435 PIRSF PIRSF000337 4 435 4.1E-168 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 SMART SM00283 346 593 6.9E-95 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 SMART SM00304 212 265 7.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 559 8.5E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 SUPERFAMILY SSF58104 366 594 2.22E-64 T 14-10-2018 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 Pfam PF00672 HAMP domain 213 260 3.3E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 Gene3D G3DSA:1.20.1480.50 172 270 1.1E-13 T 14-10-2018 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 SUPERFAMILY SSF158472 212 262 1.27E-7 T 14-10-2018 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 Gene3D G3DSA:1.10.287.950 297 595 4.4E-74 T 14-10-2018 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 396 2.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 502 2.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 521 550 2.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu5442 2859fb86eea7135d2aa2ac82e3bc35c6 646 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 471 2.0E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3634 9ffb9fd1cdf47413671ca56f62dc9d16 389 SUPERFAMILY SSF56601 31 286 2.94E-67 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu3634 9ffb9fd1cdf47413671ca56f62dc9d16 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 49 270 6.2E-59 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atu3634 9ffb9fd1cdf47413671ca56f62dc9d16 389 Gene3D G3DSA:3.40.710.10 35 288 7.1E-75 T 14-10-2018 Atu3634 9ffb9fd1cdf47413671ca56f62dc9d16 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 77 88 1.1E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu3634 9ffb9fd1cdf47413671ca56f62dc9d16 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 157 170 1.1E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu3634 9ffb9fd1cdf47413671ca56f62dc9d16 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 1.1E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu1258 dda80b297979dd38810ed9736225d8a5 210 Gene3D G3DSA:3.90.226.10 3 205 9.9E-84 T 14-10-2018 Atu1258 dda80b297979dd38810ed9736225d8a5 210 SUPERFAMILY SSF52096 18 204 9.57E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu1258 dda80b297979dd38810ed9736225d8a5 210 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 1.3E-94 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 201 42.407 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 120 133 - T 14-10-2018 IPR033135 ClpP, histidine active site Atu1258 dda80b297979dd38810ed9736225d8a5 210 PRINTS PR00127 Clp protease catalytic subunit P signature 119 138 6.9E-49 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 PRINTS PR00127 Clp protease catalytic subunit P signature 98 115 6.9E-49 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 6.9E-49 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 6.9E-49 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 PRINTS PR00127 Clp protease catalytic subunit P signature 27 42 6.9E-49 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1258 dda80b297979dd38810ed9736225d8a5 210 Pfam PF00574 Clp protease 21 200 3.0E-86 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Atu1258 dda80b297979dd38810ed9736225d8a5 210 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 98 109 - T 14-10-2018 IPR018215 ClpP, Ser active site Atu0746 a40ea2ead2aa547e5bf78a1464088444 307 Gene3D G3DSA:2.60.120.10 33 287 3.4E-71 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu0746 a40ea2ead2aa547e5bf78a1464088444 307 Gene3D G3DSA:2.60.120.10 161 261 3.4E-71 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu0746 a40ea2ead2aa547e5bf78a1464088444 307 PIRSF PIRSF006232 16 300 4.5E-87 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Atu0746 a40ea2ead2aa547e5bf78a1464088444 307 Pfam PF05726 Pirin C-terminal cupin domain 192 292 7.2E-31 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Atu0746 a40ea2ead2aa547e5bf78a1464088444 307 SUPERFAMILY SSF51182 22 303 6.44E-83 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu0746 a40ea2ead2aa547e5bf78a1464088444 307 Pfam PF02678 Pirin 34 139 4.3E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 Gene3D G3DSA:1.10.287.1040 10 83 3.7E-21 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.884 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 14 68 4.6E-24 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 14 54 4.0E-16 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 SUPERFAMILY SSF116842 8 70 1.12E-20 T 14-10-2018 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 PIRSF PIRSF006488 3 83 2.6E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atu0747 0e77f05b3ac99717eec7f98577729a7c 84 Pfam PF02609 Exonuclease VII small subunit 15 66 3.8E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Gene3D G3DSA:3.30.160.70 203 279 4.5E-10 T 14-10-2018 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 SUPERFAMILY SSF53155 205 288 2.94E-13 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 SUPERFAMILY SSF46767 283 364 1.96E-28 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Pfam PF12833 Helix-turn-helix domain 124 197 8.9E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Gene3D G3DSA:1.10.10.60 102 200 7.5E-9 T 14-10-2018 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 PIRSF PIRSF000409 14 373 6.2E-154 T 14-10-2018 IPR016221 Bifunctional regulatory protein Ada Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 SMART SM00342 116 197 1.2E-4 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 284 363 2.9E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 334 340 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Pfam PF02805 Metal binding domain of Ada 30 91 2.8E-23 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 285 364 2.7E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Gene3D G3DSA:1.10.10.10 283 368 2.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 SUPERFAMILY SSF57884 18 105 1.96E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily Atu0901 8548ec60927e6cf4afe8cae62b402bfb 378 Gene3D G3DSA:3.40.10.10 26 94 1.0E-21 T 14-10-2018 IPR035451 Ada-like domain superfamily Atu2735 1e5067ffa26833561b9779ff09e9ee9b 324 SUPERFAMILY SSF53686 7 315 4.85E-87 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu2735 1e5067ffa26833561b9779ff09e9ee9b 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 308 2.4E-70 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu2735 1e5067ffa26833561b9779ff09e9ee9b 324 Gene3D G3DSA:3.40.50.1100 12 312 2.6E-101 T 14-10-2018 Atu2735 1e5067ffa26833561b9779ff09e9ee9b 324 Gene3D G3DSA:3.40.50.1100 50 146 2.6E-101 T 14-10-2018 Atu2735 1e5067ffa26833561b9779ff09e9ee9b 324 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 Gene3D G3DSA:3.40.50.1220 193 374 5.5E-44 T 14-10-2018 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 441 460 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 SUPERFAMILY SSF52518 377 560 4.88E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu5123 ce9f9678afa99158f976c08ae8f06892 571 SUPERFAMILY SSF52467 190 395 3.82E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atu5123 ce9f9678afa99158f976c08ae8f06892 571 Gene3D G3DSA:3.40.50.970 2 182 3.8E-42 T 14-10-2018 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 335 1.6E-34 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 2.6E-36 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 550 3.3E-35 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 Gene3D G3DSA:3.40.50.970 375 569 2.0E-53 T 14-10-2018 Atu5123 ce9f9678afa99158f976c08ae8f06892 571 SUPERFAMILY SSF52518 7 174 1.85E-35 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu1049 3f965520811948b40c0e532c399c2bd8 227 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 50 227 3.4E-80 T 14-10-2018 IPR015304 ZinT domain GO:0008270 Atu1049 3f965520811948b40c0e532c399c2bd8 227 Gene3D G3DSA:2.40.128.20 44 227 3.5E-77 T 14-10-2018 IPR012674 Calycin Atu1049 3f965520811948b40c0e532c399c2bd8 227 SUPERFAMILY SSF50814 46 227 9.02E-77 T 14-10-2018 IPR012674 Calycin Atu2762 0c2302c2a49b863637175cff5b76c321 151 Gene3D G3DSA:2.60.120.10 8 147 2.3E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu2762 0c2302c2a49b863637175cff5b76c321 151 SMART SM00100 15 136 2.2E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu2762 0c2302c2a49b863637175cff5b76c321 151 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 4.4E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu2762 0c2302c2a49b863637175cff5b76c321 151 SUPERFAMILY SSF51206 10 130 5.24E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 Gene3D G3DSA:3.30.70.1660 113 341 1.6E-98 T 14-10-2018 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 SMART SM00937 64 179 1.1E-61 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 7 356 2.9E-152 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 Pfam PF00472 RF-1 domain 212 320 3.1E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 SUPERFAMILY SSF75620 12 352 1.44E-128 T 14-10-2018 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 356 39.658 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 Pfam PF03462 PCRF domain 13 204 2.7E-68 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atu4174 a527dfdc4fcd6612bbb4715fb574e5fd 360 Gene3D G3DSA:3.30.160.20 211 296 1.6E-98 T 14-10-2018 Atu3831 006ec2a7e7615ca59764949e962b9e0a 396 Gene3D G3DSA:3.30.160.390 5 92 3.2E-20 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Atu3831 006ec2a7e7615ca59764949e962b9e0a 396 Gene3D G3DSA:1.10.443.10 212 385 9.8E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu3831 006ec2a7e7615ca59764949e962b9e0a 396 SUPERFAMILY SSF56349 95 379 1.28E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu3831 006ec2a7e7615ca59764949e962b9e0a 396 Gene3D G3DSA:1.10.150.130 96 178 3.0E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Atu3831 006ec2a7e7615ca59764949e962b9e0a 396 Pfam PF13356 Arm DNA-binding domain 8 88 8.1E-15 T 14-10-2018 IPR025166 Integrase, DNA-binding domain Atu3831 006ec2a7e7615ca59764949e962b9e0a 396 Pfam PF00589 Phage integrase family 225 366 9.7E-12 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 Pfam PF03129 Anticodon binding domain 348 436 5.8E-21 T 14-10-2018 IPR004154 Anticodon-binding Atu1288 5279cec407e4e7ae095f627f4746d3da 440 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 440 61.625 T 14-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 224 1.3E-101 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 330 1.1E-37 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 Gene3D G3DSA:3.30.930.10 1 333 3.9E-111 T 14-10-2018 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 SUPERFAMILY SSF55681 10 351 2.59E-94 T 14-10-2018 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 SUPERFAMILY SSF52954 336 437 2.45E-30 T 14-10-2018 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Atu1288 5279cec407e4e7ae095f627f4746d3da 440 Gene3D G3DSA:3.40.50.800 334 439 1.5E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 2.4E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 SUPERFAMILY SSF46785 8 80 1.07E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 Gene3D G3DSA:1.20.120.530 83 228 3.7E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 Gene3D G3DSA:1.10.10.10 5 82 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 SMART SM00895 96 222 6.7E-19 T 14-10-2018 IPR011711 GntR, C-terminal Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 2.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 2.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 SUPERFAMILY SSF48008 93 228 2.38E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 Pfam PF07729 FCD domain 96 221 1.9E-23 T 14-10-2018 IPR011711 GntR, C-terminal Atu2821 2849b1991e7a0f8d70aeea7a30c02957 230 SMART SM00345 17 76 2.2E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4773 71da447444fd28f2820fa810b35f4a1f 124 Pfam PF00072 Response regulator receiver domain 7 113 8.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4773 71da447444fd28f2820fa810b35f4a1f 124 Gene3D G3DSA:3.40.50.2300 3 123 4.6E-34 T 14-10-2018 Atu4773 71da447444fd28f2820fa810b35f4a1f 124 SMART SM00448 5 116 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4773 71da447444fd28f2820fa810b35f4a1f 124 SUPERFAMILY SSF52172 7 122 4.55E-29 T 14-10-2018 IPR011006 CheY-like superfamily Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 SUPERFAMILY SSF55874 2 210 1.83E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 SUPERFAMILY SSF54211 195 324 1.97E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 305 8.0E-91 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 2.1E-11 T 14-10-2018 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 603 27.772 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 SUPERFAMILY SSF118116 415 605 3.53E-57 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Gene3D G3DSA:3.30.230.10 212 324 2.2E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Gene3D G3DSA:2.30.42.20 422 600 2.1E-55 T 14-10-2018 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Pfam PF08676 MutL C terminal dimerisation domain 416 562 4.8E-48 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 SMART SM01340 207 325 1.4E-56 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 SMART SM00853 420 563 1.0E-55 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Gene3D G3DSA:3.30.565.10 1 210 5.2E-62 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Gene3D G3DSA:3.30.1370.100 463 558 2.1E-55 T 14-10-2018 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 2.1E-36 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Atu0699 595e59c50a93e22b5a99b7194d6c632a 606 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 91 97 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 Pfam PF00313 'Cold-shock' DNA-binding domain 12 75 5.2E-21 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 PRINTS PR00050 Cold shock protein signature 13 28 3.3E-5 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 PRINTS PR00050 Cold shock protein signature 34 43 3.3E-5 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 PIRSF PIRSF002599 6 76 2.4E-17 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 ProSitePatterns PS00352 'Cold-shock' domain signature. 24 43 - T 14-10-2018 IPR019844 Cold-shock conserved site Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 Gene3D G3DSA:2.40.50.140 2 76 4.0E-24 T 14-10-2018 Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 SMART SM00357 12 76 8.2E-20 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu4214 6bba9e69ff35f074b31fe844be816cf7 76 SUPERFAMILY SSF50249 5 75 4.71E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0418 eb6698989977707d59abf8c1320bf0c2 293 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 47 274 2.7E-103 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related Atu0418 eb6698989977707d59abf8c1320bf0c2 293 SUPERFAMILY SSF52540 81 265 5.83E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0418 eb6698989977707d59abf8c1320bf0c2 293 PIRSF PIRSF028756 25 288 1.3E-107 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Atu0418 eb6698989977707d59abf8c1320bf0c2 293 Gene3D G3DSA:3.40.50.300 9 293 2.5E-107 T 14-10-2018 Atu0418 eb6698989977707d59abf8c1320bf0c2 293 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 47 275 4.6E-113 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Atu4613 14898ac827567329e8f02a3a190c6640 787 Pfam PF00534 Glycosyl transferases group 1 577 733 4.7E-17 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu4613 14898ac827567329e8f02a3a190c6640 787 SUPERFAMILY SSF53448 116 367 1.41E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4613 14898ac827567329e8f02a3a190c6640 787 Gene3D G3DSA:3.40.50.2000 424 763 1.1E-32 T 14-10-2018 Atu4613 14898ac827567329e8f02a3a190c6640 787 Pfam PF00535 Glycosyl transferase family 2 120 248 4.6E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4613 14898ac827567329e8f02a3a190c6640 787 SUPERFAMILY SSF53756 420 766 1.26E-38 T 14-10-2018 Atu4613 14898ac827567329e8f02a3a190c6640 787 Gene3D G3DSA:3.40.50.2000 568 753 1.1E-32 T 14-10-2018 Atu4613 14898ac827567329e8f02a3a190c6640 787 Gene3D G3DSA:3.90.550.10 66 382 6.1E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3203 d27420ff8de7a28f8b42964011278f57 404 Gene3D G3DSA:2.40.420.20 301 370 1.2E-106 T 14-10-2018 Atu3203 d27420ff8de7a28f8b42964011278f57 404 Gene3D G3DSA:2.40.50.100 61 205 1.2E-106 T 14-10-2018 Atu3203 d27420ff8de7a28f8b42964011278f57 404 Pfam PF00529 HlyD membrane-fusion protein of T1SS 291 357 4.0E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu3203 d27420ff8de7a28f8b42964011278f57 404 Gene3D G3DSA:2.40.30.170 48 300 1.2E-106 T 14-10-2018 Atu3203 d27420ff8de7a28f8b42964011278f57 404 SUPERFAMILY SSF111369 50 297 1.83E-78 T 14-10-2018 Atu3203 d27420ff8de7a28f8b42964011278f57 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 372 1.1E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu3203 d27420ff8de7a28f8b42964011278f57 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 290 6.8E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu3203 d27420ff8de7a28f8b42964011278f57 404 Gene3D G3DSA:1.10.287.470 96 169 1.2E-106 T 14-10-2018 Atu0560 c0c9230bb4a63d9425b53c9672ae0f23 290 Pfam PF01618 MotA/TolQ/ExbB proton channel family 132 220 7.6E-11 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atu0560 c0c9230bb4a63d9425b53c9672ae0f23 290 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Atu0560 c0c9230bb4a63d9425b53c9672ae0f23 290 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 7.3E-108 T 14-10-2018 IPR022522 Flagellar motor stator, MotA Atu0037 4041b60329f19afc02ee537ce3527912 322 Hamap MF_00215 Pantothenate kinase [coaA]. 1 322 179.266 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Atu0037 4041b60329f19afc02ee537ce3527912 322 PIRSF PIRSF000545 6 322 6.0E-140 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Atu0037 4041b60329f19afc02ee537ce3527912 322 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 15 321 4.8E-125 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Atu0037 4041b60329f19afc02ee537ce3527912 322 Gene3D G3DSA:3.40.50.300 5 322 8.6E-93 T 14-10-2018 Atu0037 4041b60329f19afc02ee537ce3527912 322 SUPERFAMILY SSF52540 11 321 3.76E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0037 4041b60329f19afc02ee537ce3527912 322 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 95 253 1.1E-14 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Atu2672 ac2378d82a5f53fc41450f6e417903d2 317 Pfam PF04392 ABC transporter substrate binding protein 24 315 1.2E-105 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein Atu2672 ac2378d82a5f53fc41450f6e417903d2 317 SUPERFAMILY SSF53822 22 297 2.55E-19 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu2672 ac2378d82a5f53fc41450f6e417903d2 317 Gene3D G3DSA:3.40.50.2300 42 287 9.7E-97 T 14-10-2018 Atu2672 ac2378d82a5f53fc41450f6e417903d2 317 Gene3D G3DSA:3.40.50.2300 138 308 9.7E-97 T 14-10-2018 Atu4192 8a647357bd9ab6fbe142b3dd258b9f12 649 SUPERFAMILY SSF53850 78 631 3.98E-89 T 14-10-2018 Atu4192 8a647357bd9ab6fbe142b3dd258b9f12 649 Gene3D G3DSA:3.10.105.10 364 610 7.1E-50 T 14-10-2018 Atu4192 8a647357bd9ab6fbe142b3dd258b9f12 649 Gene3D G3DSA:3.40.190.10 62 363 5.1E-45 T 14-10-2018 Atu4192 8a647357bd9ab6fbe142b3dd258b9f12 649 PIRSF PIRSF002741 269 629 5.3E-27 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4192 8a647357bd9ab6fbe142b3dd258b9f12 649 PIRSF PIRSF002741 78 228 1.8E-24 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4192 8a647357bd9ab6fbe142b3dd258b9f12 649 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 526 1.5E-73 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3385 5a9812480fc9363065058ec5cfeae191 923 Gene3D G3DSA:2.170.130.10 171 306 2.6E-35 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu3385 5a9812480fc9363065058ec5cfeae191 923 SUPERFAMILY SSF56935 149 923 2.93E-86 T 14-10-2018 Atu3385 5a9812480fc9363065058ec5cfeae191 923 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 148 923 1.7E-254 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 Atu3385 5a9812480fc9363065058ec5cfeae191 923 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 906 923 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site Atu3385 5a9812480fc9363065058ec5cfeae191 923 Gene3D G3DSA:3.55.50.30 53 161 5.6E-26 T 14-10-2018 Atu3385 5a9812480fc9363065058ec5cfeae191 923 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 150 923 2.7E-173 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 Atu3385 5a9812480fc9363065058ec5cfeae191 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 176 290 1.5E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu3385 5a9812480fc9363065058ec5cfeae191 923 SMART SM00965 81 133 2.6E-6 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Atu3385 5a9812480fc9363065058ec5cfeae191 923 Pfam PF00593 TonB dependent receptor 415 922 1.1E-48 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu0995 a6ecab4963cabeebb16ecc9d649e8591 247 Pfam PF00805 Pentapeptide repeats (8 copies) 63 87 0.0016 T 14-10-2018 IPR001646 Pentapeptide repeat Atu0995 a6ecab4963cabeebb16ecc9d649e8591 247 SUPERFAMILY SSF141571 49 216 9.81E-31 T 14-10-2018 Atu0995 a6ecab4963cabeebb16ecc9d649e8591 247 Pfam PF13599 Pentapeptide repeats (9 copies) 108 180 4.7E-10 T 14-10-2018 IPR001646 Pentapeptide repeat Atu0995 a6ecab4963cabeebb16ecc9d649e8591 247 Gene3D G3DSA:2.160.20.80 11 227 3.8E-33 T 14-10-2018 Atu4631 f65222d385e2fdb180055bd80e8052b9 277 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 256 30.128 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu4631 f65222d385e2fdb180055bd80e8052b9 277 PIRSF PIRSF006493 1 277 5.5E-106 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu4631 f65222d385e2fdb180055bd80e8052b9 277 Pfam PF02735 Ku70/Ku80 beta-barrel domain 13 175 4.4E-31 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Atu4631 f65222d385e2fdb180055bd80e8052b9 277 SUPERFAMILY SSF100939 3 257 9.02E-57 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Atu4631 f65222d385e2fdb180055bd80e8052b9 277 Gene3D G3DSA:2.40.290.10 4 178 8.2E-14 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Atu4631 f65222d385e2fdb180055bd80e8052b9 277 TIGRFAM TIGR02772 Ku_bact: Ku protein 4 257 1.0E-94 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu4631 f65222d385e2fdb180055bd80e8052b9 277 SMART SM00559 55 185 2.5E-12 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Atu3984 d0f45aa682e88dfb6d87cec8d7643fa9 532 Pfam PF05977 Transmembrane secretion effector 8 529 2.2E-229 T 14-10-2018 IPR010290 Transmembrane secretion effector Atu3984 d0f45aa682e88dfb6d87cec8d7643fa9 532 Gene3D G3DSA:1.20.1250.20 12 402 1.4E-38 T 14-10-2018 Atu3984 d0f45aa682e88dfb6d87cec8d7643fa9 532 SUPERFAMILY SSF103473 18 401 4.71E-47 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 1.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 SMART SM00866 100 240 2.6E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 SMART SM00345 19 78 5.6E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 Gene3D G3DSA:3.40.1410.10 89 245 8.1E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 SUPERFAMILY SSF64288 66 244 3.3E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 Gene3D G3DSA:1.10.10.10 8 84 1.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 SUPERFAMILY SSF46785 8 82 1.52E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 245 1.2E-112 T 14-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF Atu0182 ac7243ec4ced9f355cefbf09e63fdfc1 245 Pfam PF07702 UTRA domain 101 239 5.8E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 316 3.9E-29 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 Gene3D G3DSA:3.40.50.720 19 304 1.7E-97 T 14-10-2018 Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 SUPERFAMILY SSF51735 107 286 1.81E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 Gene3D G3DSA:3.40.50.720 100 288 1.7E-97 T 14-10-2018 Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 286 9.4E-59 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 SUPERFAMILY SSF52283 14 137 3.78E-33 T 14-10-2018 Atu5399 d870a631d0061a88ab03f022bac8ffd7 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 SUPERFAMILY SSF53720 11 482 2.62E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 Gene3D G3DSA:3.40.605.10 21 474 7.3E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 Pfam PF00171 Aldehyde dehydrogenase family 20 478 6.3E-163 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 Gene3D G3DSA:3.40.309.10 262 451 7.3E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu3403 5b43a0863f57f4245bafc54ded7b4154 485 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 4.1E-202 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 464 32.44 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 SUPERFAMILY SSF53623 107 319 2.49E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Pfam PF01225 Mur ligase family, catalytic domain 26 100 3.0E-15 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Pfam PF08245 Mur ligase middle domain 112 301 9.0E-51 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Gene3D G3DSA:3.90.190.20 325 469 2.0E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Gene3D G3DSA:3.40.1190.10 88 320 1.9E-63 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 SUPERFAMILY SSF53244 327 463 4.58E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Gene3D G3DSA:3.40.1390.10 2 82 6.4E-19 T 14-10-2018 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 392 8.7E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 SUPERFAMILY SSF63418 15 103 1.7E-21 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Atu2098 ab1dcab10758e08558e15e7fa157deb2 477 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 463 2.4E-114 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 Gene3D G3DSA:3.40.50.720 7 260 6.1E-80 T 14-10-2018 Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 SUPERFAMILY SSF51735 7 257 3.6E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3333 5b6f96e0dc38926b9c0ccc92173fd80c 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 256 2.0E-54 T 14-10-2018 Atu1698 8ce09fc1b53261000a6a7310fa750fa6 218 Pfam PF12804 MobA-like NTP transferase domain 15 174 2.4E-32 T 14-10-2018 IPR025877 MobA-like NTP transferase Atu1698 8ce09fc1b53261000a6a7310fa750fa6 218 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 11 209 26.805 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Atu1698 8ce09fc1b53261000a6a7310fa750fa6 218 Gene3D G3DSA:3.90.550.10 14 216 2.3E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1698 8ce09fc1b53261000a6a7310fa750fa6 218 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 14 207 1.1E-64 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Atu1698 8ce09fc1b53261000a6a7310fa750fa6 218 SUPERFAMILY SSF53448 15 206 1.26E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3502 737c8a54fe4c3ee597d1e661b94747e1 295 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 3.6E-115 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 Atu3502 737c8a54fe4c3ee597d1e661b94747e1 295 Gene3D G3DSA:1.10.3720.10 21 278 1.4E-61 T 14-10-2018 IPR035906 MetI-like superfamily Atu3502 737c8a54fe4c3ee597d1e661b94747e1 295 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 23 276 1.3E-91 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 Atu3502 737c8a54fe4c3ee597d1e661b94747e1 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 276 7.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3502 737c8a54fe4c3ee597d1e661b94747e1 295 SUPERFAMILY SSF161098 19 269 1.24E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 SUPERFAMILY SSF51735 5 245 1.93E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 1.7E-57 T 14-10-2018 Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 0.0073 T 14-10-2018 Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 Gene3D G3DSA:3.40.50.720 1 247 1.1E-73 T 14-10-2018 Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2042 178d4a7eeffc4a28c7a753bc03ecacab 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.3E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1296 ee3622317ad04544b2b2f36236e186aa 123 Pfam PF00072 Response regulator receiver domain 5 116 7.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1296 ee3622317ad04544b2b2f36236e186aa 123 Gene3D G3DSA:3.40.50.12740 1 123 5.4E-40 T 14-10-2018 Atu1296 ee3622317ad04544b2b2f36236e186aa 123 SMART SM00448 3 116 1.4E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1296 ee3622317ad04544b2b2f36236e186aa 123 SUPERFAMILY SSF52172 3 121 9.68E-35 T 14-10-2018 IPR011006 CheY-like superfamily Atu3585 b62e441a813dc60d35b3832909906e0e 298 Gene3D G3DSA:1.20.1050.10 141 258 9.3E-110 T 14-10-2018 Atu3585 b62e441a813dc60d35b3832909906e0e 298 Gene3D G3DSA:3.40.30.10 26 265 9.3E-110 T 14-10-2018 Atu3585 b62e441a813dc60d35b3832909906e0e 298 SUPERFAMILY SSF47616 141 289 2.78E-31 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu3585 b62e441a813dc60d35b3832909906e0e 298 SUPERFAMILY SSF52833 46 138 2.19E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3585 b62e441a813dc60d35b3832909906e0e 298 Pfam PF02798 Glutathione S-transferase, N-terminal domain 71 135 1.9E-5 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu3585 b62e441a813dc60d35b3832909906e0e 298 Pfam PF13410 Glutathione S-transferase, C-terminal domain 183 251 1.7E-9 T 14-10-2018 Atu2022 a880b74d34bbcb826374822c646b48e6 348 Gene3D G3DSA:3.90.180.10 12 341 9.6E-134 T 14-10-2018 Atu2022 a880b74d34bbcb826374822c646b48e6 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu2022 a880b74d34bbcb826374822c646b48e6 348 SUPERFAMILY SSF50129 9 171 1.98E-48 T 14-10-2018 IPR011032 GroES-like superfamily Atu2022 a880b74d34bbcb826374822c646b48e6 348 Gene3D G3DSA:3.40.50.720 159 313 9.6E-134 T 14-10-2018 Atu2022 a880b74d34bbcb826374822c646b48e6 348 SUPERFAMILY SSF51735 148 311 1.54E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2022 a880b74d34bbcb826374822c646b48e6 348 SMART SM00829 8 341 2.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu2022 a880b74d34bbcb826374822c646b48e6 348 Pfam PF00107 Zinc-binding dehydrogenase 185 306 2.8E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu2022 a880b74d34bbcb826374822c646b48e6 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 143 4.2E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 925 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Gene3D G3DSA:3.90.740.10 178 382 8.9E-289 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Gene3D G3DSA:3.40.50.620 22 592 8.9E-289 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 SUPERFAMILY SSF50677 195 382 1.7E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Pfam PF08264 Anticodon-binding domain of tRNA 673 822 8.6E-43 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Gene3D G3DSA:1.10.730.10 2 809 8.9E-289 T 14-10-2018 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 SUPERFAMILY SSF52374 3 641 4.96E-139 T 14-10-2018 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 631 2.2E-209 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 944 15.703 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 SUPERFAMILY SSF47323 643 894 1.21E-61 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 879 942 2.7E-17 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 Gene3D G3DSA:1.10.287.380 872 944 6.3E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 SUPERFAMILY SSF46589 879 942 5.75E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 PRINTS PR00986 Valyl-tRNA synthetase signature 386 399 2.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 2.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 PRINTS PR00986 Valyl-tRNA synthetase signature 253 270 2.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 PRINTS PR00986 Valyl-tRNA synthetase signature 506 527 2.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu1719 54bed30d1ffdbaaceedbbb6260de3145 947 PRINTS PR00986 Valyl-tRNA synthetase signature 537 555 2.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 Gene3D G3DSA:3.30.70.260 20 100 4.0E-32 T 14-10-2018 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 SUPERFAMILY SSF55021 23 98 2.58E-18 T 14-10-2018 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 24 98 5.0E-36 T 14-10-2018 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 23 186 1.2E-49 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 SUPERFAMILY SSF55021 109 188 2.22E-24 T 14-10-2018 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 Pfam PF10369 Small subunit of acetolactate synthase 113 186 1.5E-24 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 Pfam PF01842 ACT domain 24 89 1.5E-12 T 14-10-2018 IPR002912 ACT domain Atu2035 4bf8e96fc7bb1f8df07ea052c90caeaa 190 Gene3D G3DSA:3.30.70.1150 112 190 1.6E-25 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Atu1128 b9d50480bb6ece24b8f3184b727de8bd 195 PIRSF PIRSF000847 3 195 6.9E-47 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Atu1128 b9d50480bb6ece24b8f3184b727de8bd 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 7 192 6.8E-48 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Atu1128 b9d50480bb6ece24b8f3184b727de8bd 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 79 3.8E-18 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atu1128 b9d50480bb6ece24b8f3184b727de8bd 195 Gene3D G3DSA:1.20.120.1760 2 187 2.0E-14 T 14-10-2018 Atu1128 b9d50480bb6ece24b8f3184b727de8bd 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Atu0492 aba559aef89df2f5c5a53f8d89ca349c 153 Gene3D G3DSA:1.20.1290.10 1 153 5.1E-55 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0492 aba559aef89df2f5c5a53f8d89ca349c 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 2.4E-18 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu0492 aba559aef89df2f5c5a53f8d89ca349c 153 SUPERFAMILY SSF69118 5 144 9.29E-48 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0492 aba559aef89df2f5c5a53f8d89ca349c 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 37 76 6.0E-11 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu6134 93d90e0fc325ad9710673355e3d7606c 234 Gene3D G3DSA:1.10.10.10 170 234 2.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6134 93d90e0fc325ad9710673355e3d7606c 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 228 9.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu6134 93d90e0fc325ad9710673355e3d7606c 234 SUPERFAMILY SSF46894 172 234 9.52E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu6134 93d90e0fc325ad9710673355e3d7606c 234 SMART SM00421 171 228 5.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu6134 93d90e0fc325ad9710673355e3d7606c 234 Gene3D G3DSA:3.30.450.80 1 169 1.5E-67 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu6134 93d90e0fc325ad9710673355e3d7606c 234 Pfam PF03472 Autoinducer binding domain 21 153 5.4E-29 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Atu6134 93d90e0fc325ad9710673355e3d7606c 234 SUPERFAMILY SSF75516 2 160 2.88E-39 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu0078 b61bd2f9c6870e6ea2a6e94ba828d0a3 179 Gene3D G3DSA:2.30.30.40 118 168 4.2E-6 T 14-10-2018 Atu0078 b61bd2f9c6870e6ea2a6e94ba828d0a3 179 SMART SM00287 114 173 6.1 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Atu0078 b61bd2f9c6870e6ea2a6e94ba828d0a3 179 SMART SM00287 40 103 4.4E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Atu0078 b61bd2f9c6870e6ea2a6e94ba828d0a3 179 Pfam PF06347 Bacterial SH3 domain 46 102 1.1E-24 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 Atu0078 b61bd2f9c6870e6ea2a6e94ba828d0a3 179 Pfam PF06347 Bacterial SH3 domain 117 171 1.1E-19 T 14-10-2018 IPR010466 Protein of unknown function DUF1058 Atu0078 b61bd2f9c6870e6ea2a6e94ba828d0a3 179 Gene3D G3DSA:2.30.30.40 41 102 3.5E-12 T 14-10-2018 Atu4823 36d893f304e3b48ceabd2cc4deb1776c 389 Gene3D G3DSA:3.40.47.10 3 387 2.1E-95 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4823 36d893f304e3b48ceabd2cc4deb1776c 389 Pfam PF02803 Thiolase, C-terminal domain 265 361 1.1E-7 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Atu4823 36d893f304e3b48ceabd2cc4deb1776c 389 SUPERFAMILY SSF53901 1 230 5.19E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4823 36d893f304e3b48ceabd2cc4deb1776c 389 SUPERFAMILY SSF53901 248 375 1.49E-27 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4823 36d893f304e3b48ceabd2cc4deb1776c 389 PIRSF PIRSF000429 1 387 1.0E-66 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu4823 36d893f304e3b48ceabd2cc4deb1776c 389 Pfam PF00108 Thiolase, N-terminal domain 6 183 1.6E-17 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Atu0008 6a5d8d90a9b97710ac260435f4b78ba8 217 ProDom PD111165 RP434 82 210 0.002 T 14-10-2018 Atu0008 6a5d8d90a9b97710ac260435f4b78ba8 217 SUPERFAMILY SSF54427 3 214 2.19E-52 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu0008 6a5d8d90a9b97710ac260435f4b78ba8 217 SMART SM00978 69 215 6.9E-56 T 14-10-2018 IPR007379 Tim44-like domain Atu0008 6a5d8d90a9b97710ac260435f4b78ba8 217 Pfam PF04280 Tim44-like domain 70 214 9.9E-49 T 14-10-2018 IPR007379 Tim44-like domain Atu0008 6a5d8d90a9b97710ac260435f4b78ba8 217 Gene3D G3DSA:3.10.450.240 53 217 5.9E-38 T 14-10-2018 Atu0008 6a5d8d90a9b97710ac260435f4b78ba8 217 PIRSF PIRSF031890 1 217 2.7E-87 T 14-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related Atu4495 14dfb6303de59d6abbc894846c846a35 231 Gene3D G3DSA:1.10.3680.10 108 231 8.1E-11 T 14-10-2018 IPR029024 TerB-like Atu4495 14dfb6303de59d6abbc894846c846a35 231 Pfam PF04391 Protein of unknown function (DUF533) 37 226 1.9E-58 T 14-10-2018 IPR007486 Inner membrane protein YebE Atu4495 14dfb6303de59d6abbc894846c846a35 231 SUPERFAMILY SSF158682 74 228 3.66E-24 T 14-10-2018 IPR029024 TerB-like Atu4054 601404c7728e31f01acfab801015f6e2 393 Gene3D G3DSA:3.40.50.2000 190 342 5.5E-6 T 14-10-2018 Atu4054 601404c7728e31f01acfab801015f6e2 393 SUPERFAMILY SSF53756 193 337 6.91E-6 T 14-10-2018 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 Gene3D G3DSA:3.30.470.20 179 357 1.0E-67 T 14-10-2018 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 SUPERFAMILY SSF56059 104 301 1.41E-60 T 14-10-2018 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 Pfam PF02222 ATP-grasp domain 115 282 2.6E-54 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 Gene3D G3DSA:3.40.50.20 2 108 1.8E-42 T 14-10-2018 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 SUPERFAMILY SSF51246 306 354 1.18E-14 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 8 350 1.8E-116 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 8 356 41.484 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 Gene3D G3DSA:3.30.1490.20 109 178 1.5E-24 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu3755 8ebcdbe0aa8f44f1c8488f19dbbecb7b 358 SUPERFAMILY SSF52440 5 100 3.17E-30 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 ProSitePatterns PS00221 MIP family signature. 61 69 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 Gene3D G3DSA:1.20.1080.10 1 228 5.7E-88 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 PRINTS PR00783 Major intrinsic protein family signature 3 22 4.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 PRINTS PR00783 Major intrinsic protein family signature 80 99 4.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 PRINTS PR00783 Major intrinsic protein family signature 43 67 4.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 PRINTS PR00783 Major intrinsic protein family signature 165 187 4.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 PRINTS PR00783 Major intrinsic protein family signature 135 153 4.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 PRINTS PR00783 Major intrinsic protein family signature 204 224 4.1E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 Pfam PF00230 Major intrinsic protein 2 220 2.5E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 221 4.0E-56 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 228 36.084 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 Atu0476 5d56ad54595f9ed78c1bf841ff8931f7 241 SUPERFAMILY SSF81338 3 225 2.49E-65 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 Gene3D G3DSA:1.10.10.10 21 89 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 SUPERFAMILY SSF46785 20 83 3.27E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 SMART SM00895 101 227 1.9E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 Pfam PF07729 FCD domain 101 226 1.9E-22 T 14-10-2018 IPR011711 GntR, C-terminal Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 SUPERFAMILY SSF48008 98 235 9.42E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 SMART SM00345 20 79 3.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 79 1.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4718 7d0f3e6acb6e6f83f8e56ec80ddeef02 261 Gene3D G3DSA:1.20.120.530 96 237 2.1E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4380 26e559344861dd30cf823e1b9c50d88f 233 Pfam PF13545 Crp-like helix-turn-helix domain 152 225 9.6E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu4380 26e559344861dd30cf823e1b9c50d88f 233 SUPERFAMILY SSF46785 149 228 3.51E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4380 26e559344861dd30cf823e1b9c50d88f 233 Pfam PF00027 Cyclic nucleotide-binding domain 33 119 4.0E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu4380 26e559344861dd30cf823e1b9c50d88f 233 Gene3D G3DSA:2.60.120.10 1 146 2.7E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4380 26e559344861dd30cf823e1b9c50d88f 233 SUPERFAMILY SSF51206 7 145 1.28E-29 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu4380 26e559344861dd30cf823e1b9c50d88f 233 SMART SM00100 13 131 1.2E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu4380 26e559344861dd30cf823e1b9c50d88f 233 Gene3D G3DSA:1.10.10.10 147 232 3.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4380 26e559344861dd30cf823e1b9c50d88f 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 1.8E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu4380 26e559344861dd30cf823e1b9c50d88f 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 1.8E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu4380 26e559344861dd30cf823e1b9c50d88f 233 SMART SM00419 170 218 3.0E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 Gene3D G3DSA:3.20.20.450 195 447 2.4E-88 T 14-10-2018 IPR035919 EAL domain superfamily Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 Pfam PF00563 EAL domain 197 428 2.7E-68 T 14-10-2018 IPR001633 EAL domain Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 SMART SM00267 9 181 1.2E-40 T 14-10-2018 IPR000160 GGDEF domain Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 Gene3D G3DSA:3.30.70.270 14 194 4.0E-44 T 14-10-2018 Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 SUPERFAMILY SSF55073 25 183 6.28E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 SUPERFAMILY SSF141868 196 441 1.7E-80 T 14-10-2018 IPR035919 EAL domain superfamily Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 SMART SM00052 191 433 2.6E-89 T 14-10-2018 IPR001633 EAL domain Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 16 180 5.0E-28 T 14-10-2018 IPR000160 GGDEF domain Atu0701 b047b04cddef9611edfb3d99c0c0dfa1 450 Pfam PF00990 Diguanylate cyclase, GGDEF domain 20 176 1.7E-33 T 14-10-2018 IPR000160 GGDEF domain Atu3928 d46f26c782402814710b517f809675ff 492 Pfam PF07364 Metallopeptidase family M81 2 285 1.9E-82 T 14-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal Atu3928 d46f26c782402814710b517f809675ff 492 PIRSF PIRSF012702 1 490 1.0E-171 T 14-10-2018 IPR009197 Microcystin LR degradation protein MlrC Atu3928 d46f26c782402814710b517f809675ff 492 Pfam PF07171 MlrC C-terminus 301 476 4.4E-51 T 14-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal Atu1627 8294a872b9f3d0ba303025244bb057a3 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 116 129 - T 14-10-2018 IPR033135 ClpP, histidine active site Atu1627 8294a872b9f3d0ba303025244bb057a3 202 Gene3D G3DSA:3.90.226.10 1 201 3.4E-84 T 14-10-2018 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 39.957 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 4.0E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 4.0E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 4.0E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 4.0E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 4.0E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu1627 8294a872b9f3d0ba303025244bb057a3 202 SUPERFAMILY SSF52096 15 198 1.57E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu1627 8294a872b9f3d0ba303025244bb057a3 202 Pfam PF00574 Clp protease 17 196 1.9E-80 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 SUPERFAMILY SSF55073 258 415 1.1E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 406 6.9E-40 T 14-10-2018 IPR000160 GGDEF domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 111 6.1E-11 T 14-10-2018 IPR005330 MHYT domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Pfam PF03707 Bacterial signalling protein N terminal repeat 183 238 2.7E-7 T 14-10-2018 IPR005330 MHYT domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Pfam PF03707 Bacterial signalling protein N terminal repeat 120 168 4.1E-12 T 14-10-2018 IPR005330 MHYT domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 410 4.5E-34 T 14-10-2018 IPR000160 GGDEF domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Gene3D G3DSA:3.30.70.270 247 425 1.6E-53 T 14-10-2018 Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Pfam PF00563 EAL domain 431 660 4.3E-72 T 14-10-2018 IPR001633 EAL domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 Gene3D G3DSA:3.20.20.450 426 682 7.9E-97 T 14-10-2018 IPR035919 EAL domain superfamily Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 SUPERFAMILY SSF141868 431 672 2.09E-87 T 14-10-2018 IPR035919 EAL domain superfamily Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 SMART SM00267 242 413 2.5E-51 T 14-10-2018 IPR000160 GGDEF domain Atu2226 d2033496e2fd6f51c3cff73e5bbaf908 694 SMART SM00052 423 665 1.4E-106 T 14-10-2018 IPR001633 EAL domain Atu6125 c002dfe6a7f65f6ef3dd1b96240851af 81 Pfam PF06412 Conjugal transfer protein TraD 18 77 1.2E-19 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 Atu5224 1cdf3bdd7e2b00792deba7b2d2e3338a 104 Pfam PF07978 NIPSNAP 3 102 1.8E-31 T 14-10-2018 IPR012577 NIPSNAP Atu5224 1cdf3bdd7e2b00792deba7b2d2e3338a 104 SUPERFAMILY SSF54909 1 103 4.02E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu5224 1cdf3bdd7e2b00792deba7b2d2e3338a 104 Gene3D G3DSA:3.30.70.100 1 104 1.2E-38 T 14-10-2018 Atu1021 d626bb2c82461dd04d2c6053477a3f9d 365 Pfam PF02530 Porin subfamily 24 352 7.8E-107 T 14-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 Atu1021 d626bb2c82461dd04d2c6053477a3f9d 365 SUPERFAMILY SSF56935 55 365 5.22E-22 T 14-10-2018 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 SUPERFAMILY SSF53850 94 262 5.07E-20 T 14-10-2018 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 Gene3D G3DSA:3.40.190.10 164 256 6.1E-40 T 14-10-2018 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 Gene3D G3DSA:3.40.190.10 97 261 6.1E-40 T 14-10-2018 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 SUPERFAMILY SSF46785 7 112 2.64E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 Pfam PF03466 LysR substrate binding domain 93 262 1.9E-21 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3829 144c4ac67a3f225cc5db294b2cdbf004 283 Gene3D G3DSA:1.10.10.10 7 93 5.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 75 470 2.0E-132 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Gene3D G3DSA:1.10.1200.10 546 633 1.6E-18 T 14-10-2018 IPR036736 ACP-like superfamily Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 SUPERFAMILY SSF51161 1228 1343 6.65E-20 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 530 1.4E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 ProSitePatterns PS00012 Phosphopantetheine attachment site. 582 597 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 SUPERFAMILY SSF47336 551 641 4.84E-12 T 14-10-2018 IPR036736 ACP-like superfamily Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Gene3D G3DSA:3.30.300.30 440 545 8.5E-28 T 14-10-2018 Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Gene3D G3DSA:2.160.10.10 1239 1344 4.3E-16 T 14-10-2018 Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Gene3D G3DSA:2.160.10.10 755 871 4.2E-12 T 14-10-2018 Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Pfam PF00550 Phosphopantetheine attachment site 560 624 1.7E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 TIGRFAM TIGR02353 NRPS_term_dom: non-ribosomal peptide synthetase terminal domain of unknown function 651 1338 9.3E-298 T 14-10-2018 IPR012728 Non-ribosomal peptide synthetase, C-terminal Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Gene3D G3DSA:3.40.50.12780 36 438 1.1E-122 T 14-10-2018 Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 SUPERFAMILY SSF51161 691 862 3.6E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 SUPERFAMILY SSF51161 959 1094 1.52E-12 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Pfam PF00501 AMP-binding enzyme 46 446 6.5E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 PRINTS PR00154 AMP-binding signature 203 211 1.1E-5 T 14-10-2018 IPR020459 AMP-binding Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 PRINTS PR00154 AMP-binding signature 191 202 1.1E-5 T 14-10-2018 IPR020459 AMP-binding Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 1044 1072 0.0023 T 14-10-2018 IPR001451 Hexapeptide repeat Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 1288 1321 0.0028 T 14-10-2018 IPR001451 Hexapeptide repeat Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 SUPERFAMILY SSF56801 34 567 7.46E-145 T 14-10-2018 Atu3072 2fedddb5e2e7f7262332d84380bb6b4c 1344 Gene3D G3DSA:2.160.10.10 984 1084 8.4E-9 T 14-10-2018 Atu1516 a3002bce0febe3a59460ff115c80e537 229 Gene3D G3DSA:3.90.850.10 1 229 2.6E-85 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu1516 a3002bce0febe3a59460ff115c80e537 229 SUPERFAMILY SSF56529 23 228 3.53E-70 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu1516 a3002bce0febe3a59460ff115c80e537 229 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 228 1.6E-50 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Atu5415 4ffb5f2f4cb30189f9fea19bbd2aa3df 235 SUPERFAMILY SSF50475 15 215 7.07E-47 T 14-10-2018 Atu5415 4ffb5f2f4cb30189f9fea19bbd2aa3df 235 SMART SM00903 38 190 1.1E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu5415 4ffb5f2f4cb30189f9fea19bbd2aa3df 235 Pfam PF01613 Flavin reductase like domain 41 193 3.0E-22 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu5415 4ffb5f2f4cb30189f9fea19bbd2aa3df 235 Gene3D G3DSA:2.30.110.10 19 226 1.6E-64 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu3408 c7024549b80b71ec6697c52cc45148bd 281 Gene3D G3DSA:3.40.50.1000 51 269 8.8E-56 T 14-10-2018 IPR023214 HAD superfamily Atu3408 c7024549b80b71ec6697c52cc45148bd 281 SUPERFAMILY SSF56784 52 277 4.75E-30 T 14-10-2018 IPR036412 HAD-like superfamily Atu3408 c7024549b80b71ec6697c52cc45148bd 281 Gene3D G3DSA:1.10.150.750 66 138 8.8E-56 T 14-10-2018 Atu3408 c7024549b80b71ec6697c52cc45148bd 281 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 54 232 1.8E-31 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu3408 c7024549b80b71ec6697c52cc45148bd 281 Pfam PF13419 Haloacid dehalogenase-like hydrolase 134 240 6.3E-6 T 14-10-2018 Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 2.7E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 SUPERFAMILY SSF46689 1 65 3.94E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 87 195 2.6E-9 T 14-10-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 SUPERFAMILY SSF48498 96 201 2.42E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu3201 f3ef2c382507ba374b787221a7adcb1e 207 Gene3D G3DSA:1.10.357.10 1 206 1.1E-48 T 14-10-2018 Atu0246 8af65c0e446d64b3b6b0662cccdb42d1 172 SUPERFAMILY SSF55729 11 170 3.04E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0246 8af65c0e446d64b3b6b0662cccdb42d1 172 Gene3D G3DSA:3.40.630.30 1 171 8.9E-52 T 14-10-2018 Atu0246 8af65c0e446d64b3b6b0662cccdb42d1 172 Pfam PF13673 Acetyltransferase (GNAT) domain 51 148 1.8E-12 T 14-10-2018 IPR000182 GNAT domain Atu0304 79771aab30eef158b0e018cde39bcbd7 186 SMART SM01266 5 59 3.9E-14 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Atu0304 79771aab30eef158b0e018cde39bcbd7 186 Pfam PF12464 Maltose acetyltransferase 7 58 1.0E-8 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Atu0304 79771aab30eef158b0e018cde39bcbd7 186 Gene3D G3DSA:2.160.10.10 1 185 4.2E-63 T 14-10-2018 Atu0304 79771aab30eef158b0e018cde39bcbd7 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 130 165 6.2E-10 T 14-10-2018 IPR001451 Hexapeptide repeat Atu0304 79771aab30eef158b0e018cde39bcbd7 186 SUPERFAMILY SSF51161 2 183 6.24E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu0304 79771aab30eef158b0e018cde39bcbd7 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu6177 bd7ea80622bc826823daa96a9a0e9649 344 Gene3D G3DSA:3.40.50.300 121 334 4.2E-55 T 14-10-2018 Atu6177 bd7ea80622bc826823daa96a9a0e9649 344 Pfam PF00437 Type II/IV secretion system protein 13 310 7.7E-53 T 14-10-2018 IPR001482 Type II/IV secretion system protein Atu6177 bd7ea80622bc826823daa96a9a0e9649 344 SUPERFAMILY SSF52540 7 317 1.67E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6177 bd7ea80622bc826823daa96a9a0e9649 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 233 247 - T 14-10-2018 IPR001482 Type II/IV secretion system protein Atu6177 bd7ea80622bc826823daa96a9a0e9649 344 Gene3D G3DSA:3.30.450.90 6 111 1.1E-26 T 14-10-2018 Atu6177 bd7ea80622bc826823daa96a9a0e9649 344 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 17 325 2.7E-87 T 14-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 Atu1220 d01de7dd8732204f0558412ef13b438e 185 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 171 2.3E-23 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atu1220 d01de7dd8732204f0558412ef13b438e 185 SUPERFAMILY SSF46767 89 171 6.02E-20 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Atu1220 d01de7dd8732204f0558412ef13b438e 185 SUPERFAMILY SSF53155 7 84 9.61E-13 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Atu1220 d01de7dd8732204f0558412ef13b438e 185 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 139 145 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Atu1220 d01de7dd8732204f0558412ef13b438e 185 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 90 170 8.9E-18 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atu1220 d01de7dd8732204f0558412ef13b438e 185 Gene3D G3DSA:1.10.10.10 86 172 7.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 Gene3D G3DSA:2.40.50.140 1 123 3.7E-63 T 14-10-2018 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 SUPERFAMILY SSF50249 2 123 2.23E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.1E-41 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.6E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.758 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PIRSF PIRSF002133 1 123 3.2E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.2E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.2E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.2E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.2E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.2E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1951 b20a4ed625891d5ecbff4a940e785dbc 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.2E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu5026 4c4987edaf39db9975e2f03fa445a16e 136 SUPERFAMILY SSF55729 2 73 1.67E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu5026 4c4987edaf39db9975e2f03fa445a16e 136 Gene3D G3DSA:3.40.630.30 1 76 1.5E-8 T 14-10-2018 Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 Gene3D G3DSA:3.40.50.300 3 221 1.3E-63 T 14-10-2018 Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 Pfam PF08402 TOBE domain 273 351 2.0E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 Gene3D G3DSA:2.40.50.140 279 343 1.6E-10 T 14-10-2018 Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 SUPERFAMILY SSF50331 237 351 9.64E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 SMART SM00382 28 211 2.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 SUPERFAMILY SSF52540 4 242 1.04E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 Pfam PF00005 ABC transporter 19 161 1.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4578 8d850ecf59f13cf97217bc3fc9c21551 361 Gene3D G3DSA:2.40.50.940 222 351 1.6E-10 T 14-10-2018 Atu3557 b0f9224532faefcecf8e4fb534745f19 489 Pfam PF04932 O-Antigen ligase 251 393 5.2E-10 T 14-10-2018 IPR007016 O-antigen ligase-related Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 Gene3D G3DSA:1.20.1480.50 330 427 4.4E-15 T 14-10-2018 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 562 716 5.4E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 SMART SM00283 502 749 9.3E-83 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 Pfam PF00672 HAMP domain 368 416 3.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 SMART SM00304 449 501 0.13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 SMART SM00304 368 421 9.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 Gene3D G3DSA:1.10.287.950 448 750 1.2E-70 T 14-10-2018 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 SUPERFAMILY SSF58104 469 752 2.22E-62 T 14-10-2018 Atu3725 8637c0a0bd2d1caa7fe8d418dbcf3591 769 SUPERFAMILY SSF158472 368 416 1.44E-8 T 14-10-2018 Atu0561 1b898800824ac8d98673f0db20d0ade3 319 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 234 307 3.6E-18 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Atu0561 1b898800824ac8d98673f0db20d0ade3 319 SUPERFAMILY SSF101801 232 314 1.57E-11 T 14-10-2018 IPR036429 SpoA-like superfamily Atu0561 1b898800824ac8d98673f0db20d0ade3 319 Gene3D G3DSA:3.40.1550.10 37 210 5.6E-11 T 14-10-2018 IPR028976 CheC-like superfamily Atu1841 47c9beee41e323f61af19e2de35838d9 435 Gene3D G3DSA:1.10.40.30 352 431 5.7E-29 T 14-10-2018 Atu1841 47c9beee41e323f61af19e2de35838d9 435 Gene3D G3DSA:1.20.200.10 96 350 1.8E-86 T 14-10-2018 Atu1841 47c9beee41e323f61af19e2de35838d9 435 SMART SM00998 352 432 1.0E-39 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu1841 47c9beee41e323f61af19e2de35838d9 435 SUPERFAMILY SSF48557 3 432 2.51E-130 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu1841 47c9beee41e323f61af19e2de35838d9 435 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 432 1.2E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu1841 47c9beee41e323f61af19e2de35838d9 435 Pfam PF00206 Lyase 7 287 3.2E-51 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Atu1841 47c9beee41e323f61af19e2de35838d9 435 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 431 2.6E-26 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu1841 47c9beee41e323f61af19e2de35838d9 435 Gene3D G3DSA:1.10.275.10 1 95 1.6E-32 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Atu1841 47c9beee41e323f61af19e2de35838d9 435 ProSitePatterns PS00163 Fumarate lyases signature. 264 273 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atu1841 47c9beee41e323f61af19e2de35838d9 435 PRINTS PR00149 Fumarate lyase superfamily signature 219 246 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family Atu1841 47c9beee41e323f61af19e2de35838d9 435 PRINTS PR00149 Fumarate lyase superfamily signature 91 109 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family Atu1841 47c9beee41e323f61af19e2de35838d9 435 PRINTS PR00149 Fumarate lyase superfamily signature 264 280 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family Atu1841 47c9beee41e323f61af19e2de35838d9 435 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 17 77 3.7E-10 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 121 180 2.1E-9 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Gene3D G3DSA:3.40.1110.10 609 728 3.3E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 SUPERFAMILY SSF81665 349 882 4.32E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Gene3D G3DSA:3.40.50.1000 579 846 3.3E-84 T 14-10-2018 IPR023214 HAD superfamily Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 600 606 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Pfam PF00403 Heavy-metal-associated domain 17 78 1.5E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Pfam PF00403 Heavy-metal-associated domain 121 181 6.3E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 447 461 9.4E-28 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 794 813 9.4E-28 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 612 9.4E-28 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 753 9.4E-28 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 732 9.4E-28 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 817 829 9.4E-28 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Gene3D G3DSA:3.30.70.100 117 204 4.2E-17 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 ProSitePatterns PS01047 Heavy-metal-associated domain. 123 152 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Gene3D G3DSA:3.30.70.100 10 80 3.8E-18 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 SUPERFAMILY SSF56784 596 894 3.52E-50 T 14-10-2018 IPR036412 HAD-like superfamily Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 SUPERFAMILY SSF81653 400 497 3.4E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 371 871 9.9E-80 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 SUPERFAMILY SSF55008 12 85 3.14E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 365 896 5.9E-120 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Gene3D G3DSA:2.70.150.20 391 502 1.6E-35 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 347 686 6.5E-98 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Pfam PF00122 E1-E2 ATPase 398 578 2.0E-53 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 Pfam PF00702 haloacid dehalogenase-like hydrolase 595 807 8.7E-44 T 14-10-2018 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 SUPERFAMILY SSF55008 117 188 5.76E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu0843 e7d3b38e5fc2c1d99dedbe9a62e1d953 905 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 347 896 7.1E-181 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 SUPERFAMILY SSF158837 136 269 1.02E-13 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Pfam PF06748 Protein of unknown function (DUF1217) 574 725 4.0E-48 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Pfam PF06748 Protein of unknown function (DUF1217) 332 405 2.2E-7 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Pfam PF06748 Protein of unknown function (DUF1217) 451 574 7.1E-13 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Pfam PF06748 Protein of unknown function (DUF1217) 61 180 4.2E-22 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 SUPERFAMILY SSF158837 411 523 4.97E-18 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 SUPERFAMILY SSF158837 303 413 1.7E-13 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 SUPERFAMILY SSF158837 2 137 3.01E-43 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Gene3D G3DSA:1.10.3700.10 269 419 2.2E-17 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Gene3D G3DSA:1.10.3700.10 1 133 1.3E-43 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Gene3D G3DSA:1.10.3700.10 517 741 4.6E-74 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 Gene3D G3DSA:1.10.3700.10 134 251 4.1E-18 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2524 52ae6996d52cc34f2857af90bc47c6df 774 SUPERFAMILY SSF158837 538 740 1.19E-56 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu4277 36ce8bc292d66d39ca630551f89d3655 255 SUPERFAMILY SSF88713 1 249 3.04E-86 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu4277 36ce8bc292d66d39ca630551f89d3655 255 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 42.775 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Atu4277 36ce8bc292d66d39ca630551f89d3655 255 Gene3D G3DSA:3.20.20.370 1 254 3.8E-92 T 14-10-2018 Atu4277 36ce8bc292d66d39ca630551f89d3655 255 Pfam PF03746 LamB/YcsF family 3 240 5.8E-90 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Atu2132 da38ff8ab6543e5872052f5a1a44a2be 277 Gene3D G3DSA:2.70.98.80 20 277 6.7E-34 T 14-10-2018 Atu2132 da38ff8ab6543e5872052f5a1a44a2be 277 Pfam PF14486 Domain of unknown function (DUF4432) 42 166 5.1E-18 T 14-10-2018 IPR027839 Protein of unknown function DUF4432 Atu2132 da38ff8ab6543e5872052f5a1a44a2be 277 Pfam PF14486 Domain of unknown function (DUF4432) 206 276 1.1E-13 T 14-10-2018 IPR027839 Protein of unknown function DUF4432 Atu2132 da38ff8ab6543e5872052f5a1a44a2be 277 SUPERFAMILY SSF74650 74 276 2.41E-6 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu0024 bd971c5c3af34bc89889b5d928a2c60b 1061 Pfam PF12705 PD-(D/E)XK nuclease superfamily 778 1019 8.6E-22 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Atu0024 bd971c5c3af34bc89889b5d928a2c60b 1061 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 9 1051 0.0 T 14-10-2018 IPR014153 Double-strand break repair protein AddB Atu0024 bd971c5c3af34bc89889b5d928a2c60b 1061 SUPERFAMILY SSF52540 360 736 1.33E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 Gene3D G3DSA:1.10.10.10 10 84 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 SUPERFAMILY SSF46785 13 84 2.45E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 SMART SM00345 21 80 3.9E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 1.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 Pfam PF07729 FCD domain 104 231 5.5E-26 T 14-10-2018 IPR011711 GntR, C-terminal Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 SUPERFAMILY SSF48008 100 240 2.88E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 Gene3D G3DSA:1.20.120.530 96 240 4.9E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 1.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 1.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3144 cfdb94a04e7ac65a95f4008b8ef84556 245 SMART SM00895 104 232 1.0E-20 T 14-10-2018 IPR011711 GntR, C-terminal Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 Pfam PF00005 ABC transporter 31 167 9.0E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 Gene3D G3DSA:3.40.50.300 3 263 4.7E-44 T 14-10-2018 Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 SUPERFAMILY SSF52540 317 521 1.35E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 Gene3D G3DSA:3.40.50.300 302 527 2.6E-44 T 14-10-2018 Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 SUPERFAMILY SSF52540 16 208 6.19E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 SMART SM00382 29 211 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 SMART SM00382 362 529 3.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4729 d56cd75ff6fe12fa664995ee9cdaae98 533 Pfam PF00005 ABC transporter 353 483 1.0E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 SUPERFAMILY SSF52777 199 432 2.0E-45 T 14-10-2018 Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 SMART SM00823 Phosphopantetheine attachment site 472 541 1.2E-6 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 Pfam PF00550 Phosphopantetheine attachment site 474 537 2.2E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 SUPERFAMILY SSF47336 467 537 3.01E-19 T 14-10-2018 IPR036736 ACP-like superfamily Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 Gene3D G3DSA:3.30.559.30 199 427 9.1E-117 T 14-10-2018 Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 Pfam PF00668 Condensation domain 15 423 2.1E-77 T 14-10-2018 IPR001242 Condensation domain Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 Gene3D G3DSA:3.30.559.10 20 379 9.1E-117 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 Gene3D G3DSA:1.10.1200.10 456 545 8.2E-25 T 14-10-2018 IPR036736 ACP-like superfamily Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 ProSitePatterns PS00012 Phosphopantetheine attachment site. 496 511 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3684 c35b1ccd75e8f874187ba31ae8de09b5 555 SUPERFAMILY SSF52777 20 197 5.34E-44 T 14-10-2018 Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 275 1.4E-95 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 SMART SM00079 30 277 0.0071 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 Gene3D G3DSA:3.40.190.10 33 275 4.1E-104 T 14-10-2018 Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 SMART SM00062 30 278 2.5E-59 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 Gene3D G3DSA:3.40.190.10 116 234 4.1E-104 T 14-10-2018 Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 SUPERFAMILY SSF53850 1 278 4.95E-65 T 14-10-2018 Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 276 5.3E-61 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu6027 6f8fbb38b929bcb22eb17e1a879ddc1f 283 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 SMART SM00382 28 211 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 Gene3D G3DSA:2.40.50.140 290 347 3.2E-28 T 14-10-2018 Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 Gene3D G3DSA:3.40.50.300 3 221 2.7E-64 T 14-10-2018 Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 Gene3D G3DSA:2.40.50.940 222 356 3.2E-28 T 14-10-2018 Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 Pfam PF00005 ABC transporter 20 161 6.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 SUPERFAMILY SSF52540 4 242 1.02E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3021 ab8c6e4f92b31259dc5d644a564d7174 371 SUPERFAMILY SSF50331 236 363 4.37E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 6.8E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 SUPERFAMILY SSF51735 142 306 2.24E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 Gene3D G3DSA:3.40.50.720 152 286 5.1E-98 T 14-10-2018 Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 SUPERFAMILY SSF50129 1 164 5.66E-46 T 14-10-2018 IPR011032 GroES-like superfamily Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 Gene3D G3DSA:3.90.180.10 12 332 5.1E-98 T 14-10-2018 Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 Pfam PF00107 Zinc-binding dehydrogenase 179 301 1.2E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu5240 6d6d1b78ca5331508adf89c2bc0a363c 340 SMART SM00829 8 335 9.4E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu5178 3903938277193e1967a87e5bf79d008e 648 Pfam PF00005 ABC transporter 25 173 1.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5178 3903938277193e1967a87e5bf79d008e 648 SUPERFAMILY SSF52540 5 227 1.04E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5178 3903938277193e1967a87e5bf79d008e 648 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5178 3903938277193e1967a87e5bf79d008e 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 2.1E-37 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Atu5178 3903938277193e1967a87e5bf79d008e 648 Gene3D G3DSA:3.40.50.300 3 256 8.9E-66 T 14-10-2018 Atu5178 3903938277193e1967a87e5bf79d008e 648 SMART SM00382 34 221 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5178 3903938277193e1967a87e5bf79d008e 648 Pfam PF02687 FtsX-like permease family 553 641 2.5E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu0127 e3f75ffae40492942556fc0248770895 501 SMART SM00382 282 478 0.3 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0127 e3f75ffae40492942556fc0248770895 501 SMART SM00382 29 217 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0127 e3f75ffae40492942556fc0248770895 501 SUPERFAMILY SSF52540 246 487 8.14E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0127 e3f75ffae40492942556fc0248770895 501 Pfam PF00005 ABC transporter 21 168 1.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0127 e3f75ffae40492942556fc0248770895 501 Gene3D G3DSA:3.40.50.300 256 494 1.5E-40 T 14-10-2018 Atu0127 e3f75ffae40492942556fc0248770895 501 Gene3D G3DSA:3.40.50.300 1 238 1.3E-55 T 14-10-2018 Atu0127 e3f75ffae40492942556fc0248770895 501 Pfam PF00005 ABC transporter 274 429 1.0E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0127 e3f75ffae40492942556fc0248770895 501 SUPERFAMILY SSF52540 3 226 1.03E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0127 e3f75ffae40492942556fc0248770895 501 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0919 bda5a2c901e46bfaf58f5b4c733204eb 138 Gene3D G3DSA:3.90.1010.10 1 138 5.4E-52 T 14-10-2018 Atu0919 bda5a2c901e46bfaf58f5b4c733204eb 138 Pfam PF02657 Fe-S metabolism associated domain 9 131 3.7E-47 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Atu0919 bda5a2c901e46bfaf58f5b4c733204eb 138 SUPERFAMILY SSF82649 2 134 7.85E-46 T 14-10-2018 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 386 1.8E-9 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 261 6.5E-9 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SUPERFAMILY SSF46894 420 487 3.74E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SUPERFAMILY SSF55785 24 144 3.84E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SMART SM00421 424 481 1.5E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 457 469 7.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 441 457 7.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 427 441 7.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Pfam PF00196 Bacterial regulatory proteins, luxR family 427 481 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Gene3D G3DSA:3.30.450.20 11 143 1.0E-6 T 14-10-2018 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Gene3D G3DSA:1.10.10.10 378 492 1.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Pfam PF13188 PAS domain 15 52 7.5E-4 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Pfam PF13188 PAS domain 142 190 2.1E-6 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SUPERFAMILY SSF55785 139 240 4.71E-11 T 14-10-2018 IPR035965 PAS domain superfamily Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SMART SM00091 142 209 1.2E-4 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SMART SM00091 13 76 22.0 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SMART SM00091 266 332 0.053 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Pfam PF13426 PAS domain 285 378 3.9E-5 T 14-10-2018 IPR000014 PAS domain Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Gene3D G3DSA:3.30.450.20 253 377 1.5E-12 T 14-10-2018 Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 SUPERFAMILY SSF55785 254 377 3.84E-14 T 14-10-2018 IPR035965 PAS domain superfamily Atu4716 e4c24f2b1c10f191904c9b4d5ce1628f 492 Gene3D G3DSA:3.30.450.20 144 249 5.5E-11 T 14-10-2018 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 SUPERFAMILY SSF48264 47 457 1.26E-105 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 Gene3D G3DSA:1.10.630.10 22 461 1.2E-115 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 Pfam PF00067 Cytochrome P450 51 430 5.1E-84 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00385 P450 superfamily signature 396 405 1.7E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00385 P450 superfamily signature 321 332 1.7E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00385 P450 superfamily signature 405 416 1.7E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00385 P450 superfamily signature 269 286 1.7E-12 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00463 E-class P450 group I signature 320 338 1.4E-22 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00463 E-class P450 group I signature 405 428 1.4E-22 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00463 E-class P450 group I signature 360 384 1.4E-22 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00463 E-class P450 group I signature 278 304 1.4E-22 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00463 E-class P450 group I signature 258 275 1.4E-22 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 PRINTS PR00463 E-class P450 group I signature 395 405 1.4E-22 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1569 8eca8314065b3dc0fbb5fe5fed019629 464 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 398 407 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Atu0695 1d47a14d8a562664ed95e3114785f9f8 440 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 43 214 2.1E-51 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Atu0695 1d47a14d8a562664ed95e3114785f9f8 440 Gene3D G3DSA:3.40.50.2000 223 406 5.5E-53 T 14-10-2018 Atu0695 1d47a14d8a562664ed95e3114785f9f8 440 SUPERFAMILY SSF53756 59 419 7.74E-10 T 14-10-2018 Atu0695 1d47a14d8a562664ed95e3114785f9f8 440 Gene3D G3DSA:3.40.50.11720 39 213 6.7E-42 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Atu4525 7a38823bd68023170e120df54d96cf6e 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 1.6E-90 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4525 7a38823bd68023170e120df54d96cf6e 511 SUPERFAMILY SSF53850 30 510 3.98E-127 T 14-10-2018 Atu4525 7a38823bd68023170e120df54d96cf6e 511 Gene3D G3DSA:3.10.105.10 280 490 1.0E-124 T 14-10-2018 Atu4525 7a38823bd68023170e120df54d96cf6e 511 Gene3D G3DSA:3.90.76.10 64 178 1.0E-124 T 14-10-2018 Atu4525 7a38823bd68023170e120df54d96cf6e 511 PIRSF PIRSF002741 4 509 5.7E-105 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4525 7a38823bd68023170e120df54d96cf6e 511 Gene3D G3DSA:3.40.190.10 39 279 1.0E-124 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 SUPERFAMILY SSF58113 997 1144 7.06E-5 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Gene3D G3DSA:1.20.120.20 509 661 6.5E-9 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Gene3D G3DSA:1.20.120.20 1387 1542 3.1E-5 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Gene3D G3DSA:1.20.120.20 241 406 1.6E-9 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Gene3D G3DSA:1.20.120.20 1138 1272 1.0E-8 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Gene3D G3DSA:1.20.120.20 904 1050 1.7E-7 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 941 1119 4.4E-9 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 1591 1781 3.3E-7 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 303 444 6.0E-4 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 1793 1870 0.18 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 827 1004 3.4E-5 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 190 301 8.6 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 1121 1330 1.2E-7 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 626 814 4.5E-8 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 1298 1439 0.0078 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 327 506 2.2E-4 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 1336 1542 4.1E-7 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 497 679 4.6E-6 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 Pfam PF01442 Apolipoprotein A1/A4/E domain 419 605 9.5E-6 T 14-10-2018 IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 Reactome: R-HSA-8963901 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 SUPERFAMILY SSF58113 1711 1867 4.45E-5 T 14-10-2018 Atu1348 e50f97d457f969fff5f681f1e691f764 2115 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 187 1766 3.0E-8 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 PRINTS PR00313 NodO calcium binding signature 1771 1779 3.7E-9 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 PRINTS PR00313 NodO calcium binding signature 1834 1843 3.7E-9 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 PRINTS PR00313 NodO calcium binding signature 1341 1352 3.7E-9 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 PRINTS PR00313 NodO calcium binding signature 1816 1824 3.7E-9 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1322 1340 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.60.40.10 1543 1634 5.4E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.150.10.10 1311 1447 2.7E-24 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1807 1823 0.0023 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1280 1297 1.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1824 1841 0.0058 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1789 1805 0.35 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1343 1359 0.16 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1770 1786 0.016 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1262 1276 20.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1753 1764 60.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1299 1315 4.2 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1843 1859 0.0012 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1317 1333 0.13 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 SUPERFAMILY SSF51120 1732 1814 1.31E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1340 1358 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 SUPERFAMILY SSF51120 1792 1936 3.4E-30 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.60.120.560 742 929 4.6E-17 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.60.120.560 1080 1248 7.1E-24 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1821 1839 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1404 1437 7.5E-5 T 14-10-2018 IPR010566 Haemolysin-type calcium binding-related Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1830 1848 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 SUPERFAMILY SSF56300 308 605 2.01E-17 T 14-10-2018 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.150.10.10 1259 1310 7.1E-12 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.150.10.10 1806 1937 8.7E-29 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1331 1349 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Pfam PF00149 Calcineurin-like phosphoesterase 307 536 5.7E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1839 1857 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 SUPERFAMILY SSF51120 1259 1429 6.95E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:3.60.21.10 313 538 9.1E-7 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 Gene3D G3DSA:2.150.10.10 1708 1805 5.9E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4412 3e59585c8f708bc4a30252fd9afb34ac 1937 SUPERFAMILY SSF49313 1544 1637 2.83E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 PRINTS PR00143 Citrate synthase signature 91 111 6.7E-17 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 PRINTS PR00143 Citrate synthase signature 16 31 6.7E-17 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 PRINTS PR00143 Citrate synthase signature 38 66 6.7E-17 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 Pfam PF00285 Citrate synthase, C-terminal domain 9 188 9.1E-50 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 Gene3D G3DSA:1.10.580.10 9 178 2.7E-44 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 SUPERFAMILY SSF48256 8 193 2.09E-57 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Atu4851 eff2935cfb06dc486b3ef384ca6f3d83 194 Gene3D G3DSA:1.10.230.10 64 152 2.7E-44 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Atu2749 60cd0680a3aea8e9e3f9a4f042c65d22 163 Gene3D G3DSA:3.30.160.150 16 163 3.8E-23 T 14-10-2018 Atu2749 60cd0680a3aea8e9e3f9a4f042c65d22 163 Pfam PF04390 Lipopolysaccharide-assembly 27 157 5.8E-7 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Atu3743 0441b858ce4d837b43df243a458246cf 73 SUPERFAMILY SSF143800 1 71 1.29E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3743 0441b858ce4d837b43df243a458246cf 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 70 1.2E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3743 0441b858ce4d837b43df243a458246cf 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 60 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3743 0441b858ce4d837b43df243a458246cf 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3743 0441b858ce4d837b43df243a458246cf 73 PRINTS PR01249 Ribosomal protein L31 signature 50 68 1.9E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3743 0441b858ce4d837b43df243a458246cf 73 Pfam PF01197 Ribosomal protein L31 1 69 6.8E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3743 0441b858ce4d837b43df243a458246cf 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 72 27.293 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3743 0441b858ce4d837b43df243a458246cf 73 Gene3D G3DSA:2.30.170.50 1 72 1.1E-23 T 14-10-2018 Atu3992 7fe6be6ba5217b743953a63a844819c2 492 Pfam PF02321 Outer membrane efflux protein 285 464 2.0E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atu3992 7fe6be6ba5217b743953a63a844819c2 492 Pfam PF02321 Outer membrane efflux protein 82 259 7.9E-8 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atu3992 7fe6be6ba5217b743953a63a844819c2 492 SUPERFAMILY SSF56954 3 469 4.45E-51 T 14-10-2018 Atu3992 7fe6be6ba5217b743953a63a844819c2 492 Gene3D G3DSA:1.20.1600.10 35 473 9.7E-38 T 14-10-2018 Atu0406 20199e30a8be1d8ea4ad9704c6428981 349 Pfam PF00005 ABC transporter 22 166 5.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0406 20199e30a8be1d8ea4ad9704c6428981 349 SUPERFAMILY SSF50331 243 348 1.64E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu0406 20199e30a8be1d8ea4ad9704c6428981 349 SMART SM00382 31 216 2.7E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0406 20199e30a8be1d8ea4ad9704c6428981 349 Gene3D G3DSA:3.40.50.300 5 270 1.7E-75 T 14-10-2018 Atu0406 20199e30a8be1d8ea4ad9704c6428981 349 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0406 20199e30a8be1d8ea4ad9704c6428981 349 SUPERFAMILY SSF52540 7 245 2.05E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu8174 8c0400efa054f9887dace2b3f645ac27 281 Gene3D G3DSA:1.20.144.10 6 240 2.9E-14 T 14-10-2018 Atu8174 8c0400efa054f9887dace2b3f645ac27 281 SUPERFAMILY SSF48317 7 228 3.05E-20 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Atu8174 8c0400efa054f9887dace2b3f645ac27 281 Pfam PF01569 PAP2 superfamily 101 224 7.9E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Atu0434 7615601094b4d0e5f492702519ca853e 370 SUPERFAMILY SSF51283 12 169 6.28E-31 T 14-10-2018 IPR036157 dUTPase-like superfamily Atu0434 7615601094b4d0e5f492702519ca853e 370 Gene3D G3DSA:2.70.40.10 1 172 1.6E-56 T 14-10-2018 IPR036157 dUTPase-like superfamily Atu0434 7615601094b4d0e5f492702519ca853e 370 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 10 368 4.8E-175 T 14-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 Atu0434 7615601094b4d0e5f492702519ca853e 370 Gene3D G3DSA:2.70.40.10 173 345 1.9E-66 T 14-10-2018 IPR036157 dUTPase-like superfamily Atu0434 7615601094b4d0e5f492702519ca853e 370 SUPERFAMILY SSF51283 203 342 4.19E-19 T 14-10-2018 IPR036157 dUTPase-like superfamily Atu2391 a2443eaa932636ff85862dcddf886bf6 330 Pfam PF09084 NMT1/THI5 like 37 255 6.7E-39 T 14-10-2018 IPR015168 SsuA/THI5-like Atu2391 a2443eaa932636ff85862dcddf886bf6 330 SUPERFAMILY SSF53850 25 256 3.92E-29 T 14-10-2018 Atu2391 a2443eaa932636ff85862dcddf886bf6 330 Gene3D G3DSA:3.40.190.10 29 303 4.5E-60 T 14-10-2018 Atu2391 a2443eaa932636ff85862dcddf886bf6 330 Gene3D G3DSA:3.40.190.10 108 214 4.5E-60 T 14-10-2018 Atu3177 d94688be7c3d7d014c0206aede289542 157 Pfam PF00075 RNase H 4 150 3.6E-25 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Atu3177 d94688be7c3d7d014c0206aede289542 157 Gene3D G3DSA:3.30.420.10 1 157 2.2E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu3177 d94688be7c3d7d014c0206aede289542 157 SUPERFAMILY SSF53098 3 152 5.18E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu4597 1a17a596f4222fd71c353551fa002511 267 SUPERFAMILY SSF161098 56 237 3.27E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu4597 1a17a596f4222fd71c353551fa002511 267 Gene3D G3DSA:1.10.3720.10 52 247 2.0E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu4597 1a17a596f4222fd71c353551fa002511 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 246 1.1E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 Pfam PF13365 Trypsin-like peptidase domain 142 276 1.3E-33 T 14-10-2018 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 57 516 6.4E-141 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 Pfam PF13180 PDZ domain 315 406 6.0E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 Pfam PF13180 PDZ domain 438 497 3.1E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 SUPERFAMILY SSF50156 438 518 1.71E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 Gene3D G3DSA:2.30.42.10 310 417 3.2E-29 T 14-10-2018 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 PRINTS PR00834 HtrA/DegQ protease family signature 151 163 3.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 PRINTS PR00834 HtrA/DegQ protease family signature 213 237 3.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 PRINTS PR00834 HtrA/DegQ protease family signature 355 367 3.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 PRINTS PR00834 HtrA/DegQ protease family signature 172 192 3.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 3.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 PRINTS PR00834 HtrA/DegQ protease family signature 269 286 3.3E-58 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 SMART SM00228 315 397 6.9E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 SMART SM00228 437 511 9.9E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 Gene3D G3DSA:2.40.10.120 56 308 7.3E-77 T 14-10-2018 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 Gene3D G3DSA:2.30.42.10 435 518 2.5E-13 T 14-10-2018 Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 SUPERFAMILY SSF50494 55 312 1.65E-63 T 14-10-2018 IPR009003 Peptidase S1, PA clan Atu0977 3856e50e465b041bd34ebf3fd2a7487c 523 SUPERFAMILY SSF50156 298 406 2.63E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu3394 859a9bf756e4b90dc5a8131af1003736 266 SUPERFAMILY SSF52540 5 225 2.0E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3394 859a9bf756e4b90dc5a8131af1003736 266 Gene3D G3DSA:3.40.50.300 3 249 1.3E-66 T 14-10-2018 Atu3394 859a9bf756e4b90dc5a8131af1003736 266 SMART SM00382 27 220 1.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3394 859a9bf756e4b90dc5a8131af1003736 266 Pfam PF00005 ABC transporter 19 167 8.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3014 58993b6bb82cf7a7a9b281ef2b437a77 87 Gene3D G3DSA:2.10.260.10 9 53 5.3E-12 T 14-10-2018 Atu3014 58993b6bb82cf7a7a9b281ef2b437a77 87 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 14 52 5.4E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atu3014 58993b6bb82cf7a7a9b281ef2b437a77 87 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 12 54 2.6E-17 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atu3014 58993b6bb82cf7a7a9b281ef2b437a77 87 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 9 69 0.002 T 14-10-2018 Atu3014 58993b6bb82cf7a7a9b281ef2b437a77 87 SMART SM00966 13 59 1.4E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atu3014 58993b6bb82cf7a7a9b281ef2b437a77 87 SUPERFAMILY SSF89447 10 56 4.88E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atu2281 fe7641d9281d115d21d46d391a0759d4 317 SUPERFAMILY SSF53850 26 302 1.17E-82 T 14-10-2018 Atu2281 fe7641d9281d115d21d46d391a0759d4 317 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 286 1.6E-51 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu2281 fe7641d9281d115d21d46d391a0759d4 317 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 25 315 8.3E-137 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 Atu2281 fe7641d9281d115d21d46d391a0759d4 317 Gene3D G3DSA:3.40.190.100 115 224 3.8E-94 T 14-10-2018 Atu2281 fe7641d9281d115d21d46d391a0759d4 317 Gene3D G3DSA:3.40.190.10 34 294 3.8E-94 T 14-10-2018 Atu3339 ae43d8dd01d82fa87d2a1940616566f9 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 316 1.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3339 ae43d8dd01d82fa87d2a1940616566f9 324 Gene3D G3DSA:1.10.3720.10 66 320 2.0E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu3339 ae43d8dd01d82fa87d2a1940616566f9 324 SUPERFAMILY SSF161098 86 309 4.06E-59 T 14-10-2018 IPR035906 MetI-like superfamily Atu2060 64c5baea94bf256e17b2535d1790c9c8 308 SUPERFAMILY SSF53850 20 294 9.23E-76 T 14-10-2018 Atu2060 64c5baea94bf256e17b2535d1790c9c8 308 Gene3D G3DSA:3.40.190.100 109 216 5.8E-79 T 14-10-2018 Atu2060 64c5baea94bf256e17b2535d1790c9c8 308 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 18 306 2.1E-130 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 Atu2060 64c5baea94bf256e17b2535d1790c9c8 308 Gene3D G3DSA:3.40.190.10 28 287 5.8E-79 T 14-10-2018 Atu2060 64c5baea94bf256e17b2535d1790c9c8 308 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 277 4.4E-51 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu0275 a48763e2bc567149c2888d22e597636c 158 Gene3D G3DSA:3.90.960.10 1 157 7.7E-51 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atu0275 a48763e2bc567149c2888d22e597636c 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 155 1.9E-56 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Atu0275 a48763e2bc567149c2888d22e597636c 158 PIRSF PIRSF006181 1 158 1.2E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Atu0275 a48763e2bc567149c2888d22e597636c 158 Pfam PF04073 Aminoacyl-tRNA editing domain 35 146 7.7E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Atu0275 a48763e2bc567149c2888d22e597636c 158 SUPERFAMILY SSF55826 5 155 9.03E-45 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atu0048 a411576b5857cb92f1510456176cc4cc 237 SUPERFAMILY SSF141523 91 235 8.89E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0048 a411576b5857cb92f1510456176cc4cc 237 Pfam PF03734 L,D-transpeptidase catalytic domain 97 235 2.8E-14 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu0048 a411576b5857cb92f1510456176cc4cc 237 Gene3D G3DSA:2.40.440.10 68 237 4.7E-37 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0821 21206d5e38610f8758d1024c8ec41956 285 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 17 280 7.5E-123 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 Atu0821 21206d5e38610f8758d1024c8ec41956 285 SUPERFAMILY SSF161098 24 274 8.69E-54 T 14-10-2018 IPR035906 MetI-like superfamily Atu0821 21206d5e38610f8758d1024c8ec41956 285 Gene3D G3DSA:1.10.3720.10 22 281 1.9E-68 T 14-10-2018 IPR035906 MetI-like superfamily Atu0821 21206d5e38610f8758d1024c8ec41956 285 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 276 3.9E-96 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 Atu0821 21206d5e38610f8758d1024c8ec41956 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 282 3.0E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 SMART SM00304 343 396 0.075 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 SMART SM00304 424 476 1.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 Gene3D G3DSA:1.10.287.950 427 726 1.1E-76 T 14-10-2018 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 Gene3D G3DSA:3.30.450.20 54 308 4.1E-43 T 14-10-2018 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 Gene3D G3DSA:1.20.1480.50 309 402 1.1E-10 T 14-10-2018 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 538 692 9.8E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 Gene3D G3DSA:3.30.450.20 65 212 4.1E-43 T 14-10-2018 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 SMART SM00283 477 724 4.9E-98 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 SUPERFAMILY SSF58104 444 725 1.44E-70 T 14-10-2018 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 SUPERFAMILY SSF158472 344 393 1.57E-5 T 14-10-2018 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 Pfam PF02743 Cache domain 59 256 7.6E-13 T 14-10-2018 IPR033479 Double Cache domain 1 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 498 527 1.6E-43 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 604 633 1.6E-43 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 652 681 1.6E-43 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0373 7550aeb747d3b7c59d7baf81e70ed31d 775 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 602 1.6E-43 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu4734 03939d25089341ada3c292fa6935cd87 929 Gene3D G3DSA:3.30.499.10 833 926 2.0E-19 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atu4734 03939d25089341ada3c292fa6935cd87 929 Gene3D G3DSA:3.30.499.10 731 819 4.1E-7 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atu4734 03939d25089341ada3c292fa6935cd87 929 Gene3D G3DSA:1.25.40.310 4 167 4.2E-45 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Atu4734 03939d25089341ada3c292fa6935cd87 929 Pfam PF06434 Aconitate hydratase 2 N-terminus 175 406 5.1E-70 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Atu4734 03939d25089341ada3c292fa6935cd87 929 Gene3D G3DSA:3.20.19.10 168 308 2.4E-29 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Atu4734 03939d25089341ada3c292fa6935cd87 929 Gene3D G3DSA:3.30.499.10 430 567 7.8E-114 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atu4734 03939d25089341ada3c292fa6935cd87 929 Pfam PF00330 Aconitase family (aconitate hydratase) 411 894 2.0E-61 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu4734 03939d25089341ada3c292fa6935cd87 929 Pfam PF11791 Aconitate B N-terminal domain 6 162 7.7E-41 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Atu4734 03939d25089341ada3c292fa6935cd87 929 SUPERFAMILY SSF52016 172 394 2.01E-32 T 14-10-2018 Atu4734 03939d25089341ada3c292fa6935cd87 929 SUPERFAMILY SSF74778 4 166 1.31E-42 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Atu4734 03939d25089341ada3c292fa6935cd87 929 Gene3D G3DSA:3.40.1060.10 424 716 7.8E-114 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu4734 03939d25089341ada3c292fa6935cd87 929 SUPERFAMILY SSF53732 403 916 4.19E-69 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Atu4194 6b48ba282bba164b37f2733eb92519dc 374 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 184 371 1.3E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4194 6b48ba282bba164b37f2733eb92519dc 374 SUPERFAMILY SSF161098 161 359 3.66E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu4194 6b48ba282bba164b37f2733eb92519dc 374 Gene3D G3DSA:1.10.3720.10 155 369 7.6E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu4194 6b48ba282bba164b37f2733eb92519dc 374 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 71 1.8E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu0239 56c207af679b9b16031d6fbaec438c5d 298 SMART SM00342 214 293 1.4E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0239 56c207af679b9b16031d6fbaec438c5d 298 Pfam PF12833 Helix-turn-helix domain 220 293 1.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0239 56c207af679b9b16031d6fbaec438c5d 298 SUPERFAMILY SSF46689 247 292 2.42E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0239 56c207af679b9b16031d6fbaec438c5d 298 Gene3D G3DSA:1.10.10.60 194 295 4.3E-22 T 14-10-2018 Atu0239 56c207af679b9b16031d6fbaec438c5d 298 Pfam PF02311 AraC-like ligand binding domain 48 167 4.1E-24 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu0239 56c207af679b9b16031d6fbaec438c5d 298 SUPERFAMILY SSF51215 55 160 5.1E-21 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu4306 9f19aae90db66a69784aceaa4241714b 119 Pfam PF00072 Response regulator receiver domain 6 111 3.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4306 9f19aae90db66a69784aceaa4241714b 119 SUPERFAMILY SSF52172 1 115 8.11E-25 T 14-10-2018 IPR011006 CheY-like superfamily Atu4306 9f19aae90db66a69784aceaa4241714b 119 SMART SM00448 4 110 9.7E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4306 9f19aae90db66a69784aceaa4241714b 119 Gene3D G3DSA:3.40.50.2300 1 119 4.2E-25 T 14-10-2018 Atu0926 a3a74e196c8870d7c1c41a722bff8ae6 195 SUPERFAMILY SSF160935 42 166 6.15E-20 T 14-10-2018 Atu0926 a3a74e196c8870d7c1c41a722bff8ae6 195 PIRSF PIRSF009471 1 194 1.0E-88 T 14-10-2018 IPR012038 Uncharacterised conserved protein UCP009471 Atu0926 a3a74e196c8870d7c1c41a722bff8ae6 195 Gene3D G3DSA:2.60.120.600 43 170 6.6E-13 T 14-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily Atu0926 a3a74e196c8870d7c1c41a722bff8ae6 195 Pfam PF06742 Protein of unknown function (DUF1214) 72 171 7.3E-22 T 14-10-2018 IPR010621 Domain of unknown function DUF1214 Atu1547 84224f61cb849d419ba367770dc72f29 475 SMART SM00924 57 160 2.4E-25 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Atu1547 84224f61cb849d419ba367770dc72f29 475 Pfam PF01769 Divalent cation transporter 343 464 4.1E-28 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Atu1547 84224f61cb849d419ba367770dc72f29 475 SUPERFAMILY SSF161093 299 471 3.53E-50 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Atu1547 84224f61cb849d419ba367770dc72f29 475 TIGRFAM TIGR00400 mgtE: magnesium transporter 50 471 1.2E-95 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Atu1547 84224f61cb849d419ba367770dc72f29 475 Gene3D G3DSA:1.25.60.10 31 157 5.1E-13 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily Atu1547 84224f61cb849d419ba367770dc72f29 475 Gene3D G3DSA:3.10.580.10 158 283 9.8E-41 T 14-10-2018 Atu1547 84224f61cb849d419ba367770dc72f29 475 Pfam PF00571 CBS domain 227 279 5.1E-7 T 14-10-2018 IPR000644 CBS domain Atu1547 84224f61cb849d419ba367770dc72f29 475 Pfam PF00571 CBS domain 164 218 7.4E-4 T 14-10-2018 IPR000644 CBS domain Atu1547 84224f61cb849d419ba367770dc72f29 475 SUPERFAMILY SSF158791 32 157 1.7E-24 T 14-10-2018 Atu1547 84224f61cb849d419ba367770dc72f29 475 Gene3D G3DSA:1.10.357.20 296 470 7.5E-51 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Atu1547 84224f61cb849d419ba367770dc72f29 475 SMART SM00116 234 279 2.3E-5 T 14-10-2018 IPR000644 CBS domain Atu1547 84224f61cb849d419ba367770dc72f29 475 SMART SM00116 167 220 29.0 T 14-10-2018 IPR000644 CBS domain Atu1547 84224f61cb849d419ba367770dc72f29 475 SUPERFAMILY SSF54631 160 294 1.12E-29 T 14-10-2018 Atu1547 84224f61cb849d419ba367770dc72f29 475 Pfam PF03448 MgtE intracellular N domain 57 157 1.7E-21 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 5.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 5.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 5.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 Gene3D G3DSA:1.10.10.10 1 84 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 Gene3D G3DSA:3.40.190.290 90 299 3.3E-39 T 14-10-2018 Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 SUPERFAMILY SSF53850 87 297 4.65E-36 T 14-10-2018 Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 SUPERFAMILY SSF46785 3 103 4.74E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4705 a8b1fd6cb2fd11bd5119edfe71019d95 307 Pfam PF03466 LysR substrate binding domain 86 292 5.5E-34 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Gene3D G3DSA:2.40.30.10 258 343 3.2E-5 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Pfam PF00009 Elongation factor Tu GTP binding domain 2 248 2.4E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Pfam PF14492 Elongation Factor G, domain II 348 421 9.9E-9 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Gene3D G3DSA:3.40.50.300 1 257 6.8E-68 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 SUPERFAMILY SSF54211 429 540 1.48E-17 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Gene3D G3DSA:3.30.230.10 449 621 1.1E-22 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1347 42b8244de9b7336ba22bb04064a04db2 649 SUPERFAMILY SSF52540 3 248 1.05E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Gene3D G3DSA:3.30.70.240 545 615 1.1E-22 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 157 9.5E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 SMART SM00889 424 539 1.3E-7 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 SUPERFAMILY SSF54980 542 627 6.23E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 2.1E-24 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 511 528 2.1E-24 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 477 499 2.1E-24 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 462 476 2.1E-24 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 222 244 2.1E-24 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 276 302 2.1E-24 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Gene3D G3DSA:3.30.70.870 349 422 1.0E-8 T 14-10-2018 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Pfam PF03764 Elongation factor G, domain IV 445 539 4.3E-16 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.0E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu1347 42b8244de9b7336ba22bb04064a04db2 649 SUPERFAMILY SSF50447 232 336 1.77E-10 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu1347 42b8244de9b7336ba22bb04064a04db2 649 SUPERFAMILY SSF54980 349 425 1.15E-11 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu1347 42b8244de9b7336ba22bb04064a04db2 649 Pfam PF00679 Elongation factor G C-terminus 542 622 8.2E-11 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Atu4724 4fb82d78ac5c89cdf1997eeee1c7c5b9 67 PIRSF PIRSF039008 1 65 1.3E-30 T 14-10-2018 IPR026042 Stress response protein YjbJ Atu4724 4fb82d78ac5c89cdf1997eeee1c7c5b9 67 Pfam PF05532 CsbD-like 4 55 3.5E-22 T 14-10-2018 IPR008462 CsbD-like domain Atu4724 4fb82d78ac5c89cdf1997eeee1c7c5b9 67 SUPERFAMILY SSF69047 1 65 1.01E-25 T 14-10-2018 IPR036629 YjbJ superfamily Atu4724 4fb82d78ac5c89cdf1997eeee1c7c5b9 67 Gene3D G3DSA:1.10.1470.10 1 67 1.5E-29 T 14-10-2018 IPR036629 YjbJ superfamily Atu3495 f6b3aae1664903c684b347c44cade720 644 SMART SM00052 395 637 1.2E-114 T 14-10-2018 IPR001633 EAL domain Atu3495 f6b3aae1664903c684b347c44cade720 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 378 8.2E-42 T 14-10-2018 IPR000160 GGDEF domain Atu3495 f6b3aae1664903c684b347c44cade720 644 SMART SM00267 215 385 1.0E-55 T 14-10-2018 IPR000160 GGDEF domain Atu3495 f6b3aae1664903c684b347c44cade720 644 Gene3D G3DSA:3.20.20.450 398 643 1.6E-98 T 14-10-2018 IPR035919 EAL domain superfamily Atu3495 f6b3aae1664903c684b347c44cade720 644 SUPERFAMILY SSF141868 401 641 4.18E-91 T 14-10-2018 IPR035919 EAL domain superfamily Atu3495 f6b3aae1664903c684b347c44cade720 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 384 3.1E-36 T 14-10-2018 IPR000160 GGDEF domain Atu3495 f6b3aae1664903c684b347c44cade720 644 Gene3D G3DSA:3.30.70.270 220 397 3.5E-53 T 14-10-2018 Atu3495 f6b3aae1664903c684b347c44cade720 644 SUPERFAMILY SSF55073 231 385 3.85E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu3495 f6b3aae1664903c684b347c44cade720 644 Pfam PF00563 EAL domain 401 632 1.2E-74 T 14-10-2018 IPR001633 EAL domain Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 SMART SM01185 69 123 2.1E-24 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 45.417 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.4E-20 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 SUPERFAMILY SSF50104 6 65 9.03E-13 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 1.5E-16 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 SUPERFAMILY SSF50249 67 128 4.8E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Gene3D G3DSA:2.40.50.140 130 188 3.8E-20 T 14-10-2018 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Gene3D G3DSA:2.40.50.140 67 129 6.2E-24 T 14-10-2018 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 SMART SM00841 131 186 3.1E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 SUPERFAMILY SSF50249 130 187 8.57E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 PIRSF PIRSF005901 2 188 1.7E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 2.1E-63 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.9E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Atu2553 54d0f55835f97b301c5e9e33d791ee38 189 Gene3D G3DSA:2.30.30.30 4 65 6.9E-16 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atu2485 3357c35cd927a6ad3d808c352be7dfdf 281 SUPERFAMILY SSF56219 48 277 3.27E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu2485 3357c35cd927a6ad3d808c352be7dfdf 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 50 267 7.1E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atu2485 3357c35cd927a6ad3d808c352be7dfdf 281 Gene3D G3DSA:3.60.10.10 48 277 1.5E-33 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 177 193 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SUPERFAMILY SSF47336 1366 1439 1.83E-15 T 14-10-2018 IPR036736 ACP-like superfamily Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Pfam PF00550 Phosphopantetheine attachment site 1376 1439 5.8E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 15 262 3.6E-70 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Gene3D G3DSA:3.40.50.1820 1362 1464 6.2E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Gene3D G3DSA:3.40.50.720 872 1353 3.1E-49 T 14-10-2018 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SUPERFAMILY SSF52151 536 814 2.2E-67 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Gene3D G3DSA:3.40.366.10 536 832 4.0E-129 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SUPERFAMILY SSF51735 894 1103 4.98E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1397 1412 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SUPERFAMILY SSF55048 659 718 1.44E-6 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 538 827 3.8E-88 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 392 504 1.8E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SUPERFAMILY SSF53901 15 436 6.58E-84 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Pfam PF00698 Acyl transferase domain 536 810 3.7E-47 T 14-10-2018 IPR014043 Acyl transferase Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Pfam PF08659 KR domain 1116 1277 4.3E-8 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Gene3D G3DSA:3.30.70.3290 457 871 4.0E-129 T 14-10-2018 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SUPERFAMILY SSF51735 1114 1289 5.06E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 271 388 2.1E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 Gene3D G3DSA:3.40.47.10 12 441 9.5E-157 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SMART SM00825 Beta-ketoacyl synthase 17 441 1.8E-179 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atu3681 509cc6dc672a298e5c21f417812b02bc 1477 SMART SM00823 Phosphopantetheine attachment site 1373 1443 0.0085 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 118 2.5E-37 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 329 7.4E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:2.40.50.100 1074 1150 2.1E-26 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Pfam PF02436 Conserved carboxylase domain 834 1033 7.2E-73 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SUPERFAMILY SSF51246 346 464 8.37E-38 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SUPERFAMILY SSF56059 91 359 4.95E-61 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Pfam PF00682 HMGL-like 539 810 7.1E-27 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SUPERFAMILY SSF52440 3 121 1.94E-39 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Pfam PF00364 Biotin-requiring enzyme 1085 1149 3.0E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SUPERFAMILY SSF51569 531 842 5.13E-82 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1108 1125 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:3.20.20.70 516 825 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Pfam PF02785 Biotin carboxylase C-terminal domain 351 458 1.6E-33 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 PIRSF PIRSF001594 1 1153 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 5 1151 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SMART SM00878 351 458 8.4E-50 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:1.10.10.60 957 1002 0.0 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:3.30.470.130 1 466 2.9E-206 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SUPERFAMILY SSF89000 839 1016 3.37E-56 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:3.10.600.10 470 501 3.4E-6 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 SUPERFAMILY SSF51230 1073 1149 9.16E-21 T 14-10-2018 IPR011053 Single hybrid motif Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:1.10.472.90 826 956 0.0 T 14-10-2018 Atu2726 5e7730fb180887af1a35404ab46c1d12 1153 Gene3D G3DSA:3.10.600.10 508 1066 0.0 T 14-10-2018 Atu3115 530875a84cb76863e498f4e5fbb6ca67 232 SUPERFAMILY SSF48498 106 230 1.37E-32 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu3115 530875a84cb76863e498f4e5fbb6ca67 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 85 4.7E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3115 530875a84cb76863e498f4e5fbb6ca67 232 Gene3D G3DSA:1.10.357.10 35 231 2.3E-65 T 14-10-2018 Atu3115 530875a84cb76863e498f4e5fbb6ca67 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 4.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3115 530875a84cb76863e498f4e5fbb6ca67 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 60 83 4.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3115 530875a84cb76863e498f4e5fbb6ca67 232 SUPERFAMILY SSF46689 26 108 4.1E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 Gene3D G3DSA:3.40.50.300 4 221 4.0E-66 T 14-10-2018 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 Gene3D G3DSA:2.40.50.140 289 345 1.3E-34 T 14-10-2018 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 SUPERFAMILY SSF50331 236 360 7.78E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 Gene3D G3DSA:2.40.50.940 222 354 1.3E-34 T 14-10-2018 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 SUPERFAMILY SSF52540 4 243 9.58E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 Pfam PF08402 TOBE domain 282 353 7.7E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 Pfam PF00005 ABC transporter 20 161 9.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3148 39ae6c3bd8c7d853b13ee5b364634eff 361 SMART SM00382 28 219 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 352 3.4E-89 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 5 353 39.076 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 144 165 1.5E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 18 34 1.5E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 217 227 1.5E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 1.5E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 Gene3D G3DSA:1.10.240.10 210 322 1.6E-121 T 14-10-2018 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 Pfam PF00579 tRNA synthetases class I (W and Y) 8 298 9.6E-72 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 Gene3D G3DSA:3.40.50.620 8 351 1.6E-121 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 SUPERFAMILY SSF52374 7 352 1.32E-89 T 14-10-2018 Atu0349 a236a1fe6c591aad8d31a8d08f2a1b6c 354 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 Pfam PF03167 Uracil DNA glycosylase superfamily 316 458 1.3E-37 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 Gene3D G3DSA:3.40.470.10 279 481 5.3E-61 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 244 478 7.4E-105 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 9 242 4.0E-64 T 14-10-2018 IPR023875 DNA metabolism protein, putative Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 Pfam PF13566 Domain of unknown function (DUF4130 81 241 3.7E-41 T 14-10-2018 IPR025404 Domain of unknown function DUF4130 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 SMART SM00987 316 472 1.1E-37 T 14-10-2018 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 SUPERFAMILY SSF52141 291 477 4.91E-55 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 302 464 8.7E-39 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Atu2180 e29b65e532d3a27e5c525af82f6af6bd 481 SMART SM00986 316 472 1.1E-37 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2012 0ac0be56269bdc45088de25ccc1e01ff 342 Pfam PF00005 ABC transporter 22 167 2.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2012 0ac0be56269bdc45088de25ccc1e01ff 342 Pfam PF08402 TOBE domain 279 340 6.9E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu2012 0ac0be56269bdc45088de25ccc1e01ff 342 SMART SM00382 30 217 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2012 0ac0be56269bdc45088de25ccc1e01ff 342 Gene3D G3DSA:3.40.50.300 2 243 4.4E-71 T 14-10-2018 Atu2012 0ac0be56269bdc45088de25ccc1e01ff 342 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2012 0ac0be56269bdc45088de25ccc1e01ff 342 SUPERFAMILY SSF52540 5 243 1.56E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6013 619919b66c79fc63e6f8684a082ea215 186 Pfam PF02027 RolB/RolC glucosidase family 1 169 5.5E-34 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 SMART SM00304 176 229 3.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 SUPERFAMILY SSF55874 285 442 3.67E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 SMART SM00387 341 450 3.4E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 446 9.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 SUPERFAMILY SSF47384 213 294 1.28E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 Gene3D G3DSA:1.10.287.130 181 297 8.5E-13 T 14-10-2018 Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 Gene3D G3DSA:3.30.565.10 302 449 9.8E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0628 7a7b0fe4b7354c25c0ec60bd068b8951 451 SUPERFAMILY SSF158472 180 225 8.37E-5 T 14-10-2018 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 Gene3D G3DSA:3.40.47.10 141 397 6.9E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 PIRSF PIRSF000429 1 401 1.9E-127 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 3.0E-76 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 8.9E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 2.0E-208 T 14-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 Gene3D G3DSA:3.40.47.10 6 282 6.9E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 SUPERFAMILY SSF53901 3 276 3.49E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 SUPERFAMILY SSF53901 277 400 5.94E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Atu4549 5791c85c4e721d1a91d3c45ed18513cc 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 6.1E-134 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 Pfam PF00106 short chain dehydrogenase 6 189 9.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 Gene3D G3DSA:3.40.50.720 5 261 3.7E-60 T 14-10-2018 Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 SUPERFAMILY SSF51735 4 241 7.2E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3591 11e725bfc0d8e8c7078bb28e24213712 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 SMART SM00345 21 79 1.8E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 Gene3D G3DSA:1.10.10.10 15 79 5.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 SUPERFAMILY SSF48008 100 223 6.02E-14 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 SMART SM00895 89 218 2.5E-8 T 14-10-2018 IPR011711 GntR, C-terminal Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 79 2.0E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 Pfam PF07729 FCD domain 97 217 7.6E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 SUPERFAMILY SSF46785 20 83 8.39E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3961 11f85bb08a6b99e4c7a928e5e0ea518d 249 Gene3D G3DSA:1.20.120.530 93 224 3.0E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Gene3D G3DSA:1.10.287.130 759 864 7.1E-11 T 14-10-2018 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Pfam PF12860 PAS fold 651 760 3.9E-31 T 14-10-2018 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SUPERFAMILY SSF47384 785 867 9.81E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SUPERFAMILY SSF52172 1042 1163 9.25E-20 T 14-10-2018 IPR011006 CheY-like superfamily Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SMART SM00387 910 1020 1.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SMART SM00388 801 866 5.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SUPERFAMILY SSF55874 857 1018 1.44E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 998 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1004 1017 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 974 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 PRINTS PR00344 Bacterial sensor protein C-terminal signature 946 960 2.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Gene3D G3DSA:3.30.565.10 868 1023 5.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Gene3D G3DSA:1.20.1730.10 39 541 1.5E-11 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 911 1019 1.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Gene3D G3DSA:3.40.50.2300 1035 1166 3.7E-16 T 14-10-2018 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Gene3D G3DSA:3.30.450.20 632 758 4.9E-8 T 14-10-2018 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Pfam PF00072 Response regulator receiver domain 1046 1157 5.3E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 Pfam PF00512 His Kinase A (phospho-acceptor) domain 802 866 2.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SUPERFAMILY SSF55785 635 754 1.96E-7 T 14-10-2018 IPR035965 PAS domain superfamily Atu0527 d84c7237d51c8941cff4c4a3a0366154 1169 SMART SM00448 1044 1157 4.9E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3146 42d7c16e0d5a3fb396360092c694f4f4 410 Gene3D G3DSA:3.90.230.10 180 406 8.0E-40 T 14-10-2018 Atu3146 42d7c16e0d5a3fb396360092c694f4f4 410 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 180 5.4E-14 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Atu3146 42d7c16e0d5a3fb396360092c694f4f4 410 Pfam PF00557 Metallopeptidase family M24 187 390 4.5E-27 T 14-10-2018 IPR000994 Peptidase M24 Atu3146 42d7c16e0d5a3fb396360092c694f4f4 410 SUPERFAMILY SSF53092 7 178 4.71E-15 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu3146 42d7c16e0d5a3fb396360092c694f4f4 410 SUPERFAMILY SSF55920 179 406 5.1E-42 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu3146 42d7c16e0d5a3fb396360092c694f4f4 410 Gene3D G3DSA:3.40.350.10 6 179 2.1E-14 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2218 a53a813c6d79268c32404cafa1d663d2 310 Gene3D G3DSA:3.40.50.2020 4 298 3.0E-125 T 14-10-2018 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 SUPERFAMILY SSF53271 66 299 3.37E-63 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu2218 a53a813c6d79268c32404cafa1d663d2 310 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 310 49.365 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 Gene3D G3DSA:3.40.50.2020 144 286 3.0E-125 T 14-10-2018 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 309 9.2E-23 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 4.1E-118 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 4.7E-52 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Atu2218 a53a813c6d79268c32404cafa1d663d2 310 SMART SM01400 1 117 4.2E-83 T 14-10-2018 Atu2185 c4f6b359cb13321f689045a58f50935f 324 Gene3D G3DSA:3.50.50.60 8 307 3.1E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 262 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 7.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 Gene3D G3DSA:3.50.50.60 118 247 3.1E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2185 c4f6b359cb13321f689045a58f50935f 324 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 313 8.8E-122 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-39 T 14-10-2018 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.0E-39 T 14-10-2018 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.0E-39 T 14-10-2018 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.0E-39 T 14-10-2018 Atu2185 c4f6b359cb13321f689045a58f50935f 324 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 2.0E-39 T 14-10-2018 Atu2185 c4f6b359cb13321f689045a58f50935f 324 SUPERFAMILY SSF51905 2 313 1.65E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2185 c4f6b359cb13321f689045a58f50935f 324 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 302 4.0E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu2185 c4f6b359cb13321f689045a58f50935f 324 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Atu0170 2b84c20f1a51ef60bb15ffec49732aee 229 PIRSF PIRSF033328 1 229 2.7E-116 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0170 2b84c20f1a51ef60bb15ffec49732aee 229 TIGRFAM TIGR03223 Phn_opern_protn: putative phosphonate metabolism protein 2 221 1.2E-91 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0170 2b84c20f1a51ef60bb15ffec49732aee 229 Pfam PF06299 Protein of unknown function (DUF1045) 54 212 5.0E-63 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 Pfam PF08345 Flagellar M-ring protein C-terminal 255 420 4.9E-32 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 PRINTS PR01009 Flagellar M-ring protein signature 199 217 2.3E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 PRINTS PR01009 Flagellar M-ring protein signature 158 172 2.3E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 PRINTS PR01009 Flagellar M-ring protein signature 268 286 2.3E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 PRINTS PR01009 Flagellar M-ring protein signature 126 144 2.3E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 PRINTS PR01009 Flagellar M-ring protein signature 344 368 2.3E-35 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 PIRSF PIRSF004862 5 566 5.3E-119 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 Gene3D G3DSA:3.30.300.30 127 224 9.5E-13 T 14-10-2018 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 29 430 2.6E-59 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Atu0523 23d9c10d056d61b033ac87a882bcdd49 566 Pfam PF01514 Secretory protein of YscJ/FliF family 36 223 1.6E-54 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 226 1.9E-57 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 1 391 41.779 T 14-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 228 37.153 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Gene3D G3DSA:3.90.550.10 2 233 1.8E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 SUPERFAMILY SSF69765 235 390 4.32E-59 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 235 390 30.816 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 SUPERFAMILY SSF53448 4 228 2.93E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 236 389 1.2E-54 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Gene3D G3DSA:3.30.1330.50 234 393 1.5E-60 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 269 284 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 9.8E-66 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Atu1443 d90b8b9da9889d4fc49d7d7fc7835459 395 Pfam PF02542 YgbB family 236 388 5.9E-56 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 SMART SM00382 29 212 1.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 354 5.0E-107 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 Gene3D G3DSA:2.40.50.140 286 343 1.0E-10 T 14-10-2018 Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 Gene3D G3DSA:2.40.50.940 223 285 1.0E-10 T 14-10-2018 Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 Gene3D G3DSA:3.40.50.300 4 222 3.0E-71 T 14-10-2018 Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 SUPERFAMILY SSF52540 5 242 1.49E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 Pfam PF00005 ABC transporter 21 162 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 SUPERFAMILY SSF50331 238 353 7.82E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5423 5bfd0006329edb1ec37cb8e0f843633d 356 Pfam PF08402 TOBE domain 279 354 3.0E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 SUPERFAMILY SSF52540 262 504 1.45E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 SMART SM00382 296 493 0.65 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 SMART SM00382 30 225 4.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 SUPERFAMILY SSF52540 5 236 1.13E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 Pfam PF00005 ABC transporter 21 159 6.6E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 Gene3D G3DSA:3.40.50.300 268 523 1.4E-41 T 14-10-2018 Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 Gene3D G3DSA:3.40.50.300 1 243 7.5E-49 T 14-10-2018 Atu6069 20f0e18397ffa278e4de20b5c1f6a2de 528 Pfam PF00005 ABC transporter 287 445 1.0E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1246 d94341c2921e266ffba51ee59f0d4fb2 155 ProSitePatterns PS00360 Ribosomal protein S9 signature. 94 112 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Atu1246 d94341c2921e266ffba51ee59f0d4fb2 155 Pfam PF00380 Ribosomal protein S9/S16 35 155 2.3E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Atu1246 d94341c2921e266ffba51ee59f0d4fb2 155 Gene3D G3DSA:3.30.230.10 27 155 2.9E-49 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1246 d94341c2921e266ffba51ee59f0d4fb2 155 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 26 155 32.312 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Atu1246 d94341c2921e266ffba51ee59f0d4fb2 155 SUPERFAMILY SSF54211 30 155 3.03E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu4382 da5648f200e67401e5e3766812df41fa 380 Gene3D G3DSA:2.60.40.420 199 379 5.0E-54 T 14-10-2018 IPR008972 Cupredoxin Atu4382 da5648f200e67401e5e3766812df41fa 380 Pfam PF07732 Multicopper oxidase 91 200 6.5E-9 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Atu4382 da5648f200e67401e5e3766812df41fa 380 Pfam PF00394 Multicopper oxidase 215 366 2.0E-20 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Atu4382 da5648f200e67401e5e3766812df41fa 380 SUPERFAMILY SSF49503 207 375 1.33E-73 T 14-10-2018 IPR008972 Cupredoxin Atu4382 da5648f200e67401e5e3766812df41fa 380 Gene3D G3DSA:2.60.40.420 51 198 2.8E-39 T 14-10-2018 IPR008972 Cupredoxin Atu4382 da5648f200e67401e5e3766812df41fa 380 PRINTS PR00695 Copper containing nitrite reductase signature 163 178 8.6E-62 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu4382 da5648f200e67401e5e3766812df41fa 380 PRINTS PR00695 Copper containing nitrite reductase signature 138 157 8.6E-62 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu4382 da5648f200e67401e5e3766812df41fa 380 PRINTS PR00695 Copper containing nitrite reductase signature 76 94 8.6E-62 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu4382 da5648f200e67401e5e3766812df41fa 380 PRINTS PR00695 Copper containing nitrite reductase signature 181 197 8.6E-62 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu4382 da5648f200e67401e5e3766812df41fa 380 PRINTS PR00695 Copper containing nitrite reductase signature 103 119 8.6E-62 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu4382 da5648f200e67401e5e3766812df41fa 380 PRINTS PR00695 Copper containing nitrite reductase signature 121 138 8.6E-62 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu4382 da5648f200e67401e5e3766812df41fa 380 SUPERFAMILY SSF49503 53 205 1.03E-34 T 14-10-2018 IPR008972 Cupredoxin Atu4382 da5648f200e67401e5e3766812df41fa 380 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 53 377 4.0E-164 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Atu3612 db818eba8911c05abaab5002b424e3f7 368 SUPERFAMILY SSF53383 10 364 5.3E-76 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3612 db818eba8911c05abaab5002b424e3f7 368 Pfam PF00155 Aminotransferase class I and II 32 355 6.0E-49 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu3612 db818eba8911c05abaab5002b424e3f7 368 Gene3D G3DSA:3.40.640.10 45 269 4.4E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3612 db818eba8911c05abaab5002b424e3f7 368 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 363 3.0E-85 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Atu3612 db818eba8911c05abaab5002b424e3f7 368 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 365 55.509 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Atu3612 db818eba8911c05abaab5002b424e3f7 368 Gene3D G3DSA:3.90.1150.10 28 355 4.4E-102 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3642 a860b23a299acb028ecc23746d028bde 754 Gene3D G3DSA:2.30.110.50 21 350 8.0E-78 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 Gene3D G3DSA:2.40.50.230 372 472 3.0E-38 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Atu3642 a860b23a299acb028ecc23746d028bde 754 SUPERFAMILY SSF69279 18 200 9.35E-43 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 Gene3D G3DSA:3.55.50.10 112 204 8.0E-78 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 30 519 1.1E-110 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Atu3642 a860b23a299acb028ecc23746d028bde 754 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 536 5.0E-170 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Atu3642 a860b23a299acb028ecc23746d028bde 754 Gene3D G3DSA:3.30.1920.30 240 303 8.0E-78 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 SUPERFAMILY SSF69279 221 380 4.25E-25 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 SUPERFAMILY SSF69255 380 468 1.7E-30 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 Pfam PF05954 Phage late control gene D protein (GPD) 36 347 1.8E-73 T 14-10-2018 Atu3642 a860b23a299acb028ecc23746d028bde 754 SUPERFAMILY SSF69349 458 754 1.88E-33 T 14-10-2018 Atu2280 de8f0b6ecb5f1bff6137fc9a1a036130 343 Gene3D G3DSA:1.10.3720.10 149 336 2.4E-33 T 14-10-2018 IPR035906 MetI-like superfamily Atu2280 de8f0b6ecb5f1bff6137fc9a1a036130 343 SUPERFAMILY SSF161098 150 335 5.49E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu2280 de8f0b6ecb5f1bff6137fc9a1a036130 343 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 69 334 1.8E-131 T 14-10-2018 IPR017784 ABC transporter, choline, permease protein Atu2280 de8f0b6ecb5f1bff6137fc9a1a036130 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 330 2.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4530 78b38e67e0d44788e17c1f3dab04d170 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 1.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4530 78b38e67e0d44788e17c1f3dab04d170 230 SUPERFAMILY SSF46689 16 83 1.33E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4530 78b38e67e0d44788e17c1f3dab04d170 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 7.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4530 78b38e67e0d44788e17c1f3dab04d170 230 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 7.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4530 78b38e67e0d44788e17c1f3dab04d170 230 Gene3D G3DSA:1.10.357.10 23 225 5.0E-60 T 14-10-2018 Atu4530 78b38e67e0d44788e17c1f3dab04d170 230 SUPERFAMILY SSF48498 93 218 3.62E-37 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu2096 b90a237e3901b9024e4a778e69b017dd 469 Pfam PF08245 Mur ligase middle domain 119 297 2.1E-32 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 Gene3D G3DSA:3.40.50.720 6 97 7.7E-12 T 14-10-2018 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 SUPERFAMILY SSF53623 110 314 1.13E-50 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 456 32.367 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 SUPERFAMILY SSF51984 6 98 1.14E-11 T 14-10-2018 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 359 9.1E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 Gene3D G3DSA:3.40.1190.10 98 316 1.9E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 454 7.8E-106 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 SUPERFAMILY SSF53244 316 456 3.07E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 Gene3D G3DSA:3.90.190.20 322 459 8.3E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2096 b90a237e3901b9024e4a778e69b017dd 469 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 117 140 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Atu0592 06cd64b04375f03327e849fa8bdc0671 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 293 3.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0592 06cd64b04375f03327e849fa8bdc0671 306 SUPERFAMILY SSF160964 23 53 6.41E-6 T 14-10-2018 Atu0592 06cd64b04375f03327e849fa8bdc0671 306 SUPERFAMILY SSF161098 63 289 4.58E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu0592 06cd64b04375f03327e849fa8bdc0671 306 Gene3D G3DSA:1.10.3720.10 59 304 8.5E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu0913 5adb3da14d8d97e2e129808d598d2c0b 159 PIRSF PIRSF019239 1 159 2.6E-41 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Atu0913 5adb3da14d8d97e2e129808d598d2c0b 159 Pfam PF01899 Na+/H+ ion antiporter subunit 8 155 8.3E-42 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Gene3D G3DSA:1.10.8.60 317 381 7.4E-20 T 14-10-2018 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 SMART SM00448 5 116 4.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Gene3D G3DSA:3.40.50.2300 1 130 9.4E-37 T 14-10-2018 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 SUPERFAMILY SSF52172 4 190 7.97E-40 T 14-10-2018 IPR011006 CheY-like superfamily Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Gene3D G3DSA:1.10.10.60 384 446 3.5E-12 T 14-10-2018 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 SUPERFAMILY SSF52540 145 375 1.9E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Pfam PF02954 Bacterial regulatory protein, Fis family 401 441 2.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Pfam PF00158 Sigma-54 interaction domain 145 312 1.5E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 SUPERFAMILY SSF46689 357 443 6.72E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Gene3D G3DSA:3.40.50.300 131 316 8.0E-57 T 14-10-2018 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 Pfam PF00072 Response regulator receiver domain 7 115 8.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3296 25e01118932ce42c1fe6b93a0d851df9 454 SMART SM00382 165 309 3.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4795 eca45cd43021888595182c8250a7cc7a 236 ProSitePatterns PS00622 LuxR-type HTH domain signature. 189 216 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 227 1.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 SUPERFAMILY SSF46894 166 228 1.87E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 SUPERFAMILY SSF52172 27 148 8.64E-7 T 14-10-2018 IPR011006 CheY-like superfamily Atu4795 eca45cd43021888595182c8250a7cc7a 236 SMART SM00421 172 229 1.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 3.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 3.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 3.3E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4795 eca45cd43021888595182c8250a7cc7a 236 Gene3D G3DSA:3.40.50.12740 27 231 6.1E-22 T 14-10-2018 Atu3866 13d5fd1a4eae6cf3d6098a5536551211 801 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 520 800 1.3E-57 T 14-10-2018 IPR007296 Domain of unknown function DUF403 Atu3866 13d5fd1a4eae6cf3d6098a5536551211 801 Gene3D G3DSA:3.40.50.11290 230 327 1.3E-33 T 14-10-2018 Atu3866 13d5fd1a4eae6cf3d6098a5536551211 801 SUPERFAMILY SSF56059 44 434 1.62E-15 T 14-10-2018 Atu3866 13d5fd1a4eae6cf3d6098a5536551211 801 Pfam PF14403 Circularly permuted ATP-grasp type 2 94 472 3.2E-139 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Atu1887 2c665728bf51cd6111a358099ccd73f2 184 Gene3D G3DSA:2.40.50.90 22 151 1.0E-21 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily Atu1887 2c665728bf51cd6111a358099ccd73f2 184 Pfam PF00565 Staphylococcal nuclease homologue 47 146 6.3E-13 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Atu1887 2c665728bf51cd6111a358099ccd73f2 184 SUPERFAMILY SSF50199 33 149 1.15E-27 T 14-10-2018 Atu1887 2c665728bf51cd6111a358099ccd73f2 184 SMART SM00318 26 147 1.3E-7 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Atu6146 7ef114e501ba250c292388dadd39f96c 152 Pfam PF00293 NUDIX domain 31 136 1.3E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu6146 7ef114e501ba250c292388dadd39f96c 152 SUPERFAMILY SSF55811 20 149 1.08E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu6146 7ef114e501ba250c292388dadd39f96c 152 Gene3D G3DSA:3.90.79.10 17 152 6.3E-21 T 14-10-2018 Atu5440 f472394b9f65970e75045eeb3ab96725 76 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 13 72 3.6E-16 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system Atu5449 9aa489d80353682fc97249261d3c9d6e 158 Pfam PF00011 Hsp20/alpha crystallin family 42 137 4.1E-17 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Atu5449 9aa489d80353682fc97249261d3c9d6e 158 SUPERFAMILY SSF49764 14 137 6.8E-20 T 14-10-2018 IPR008978 HSP20-like chaperone Atu5449 9aa489d80353682fc97249261d3c9d6e 158 Gene3D G3DSA:2.60.40.790 36 139 1.2E-21 T 14-10-2018 IPR008978 HSP20-like chaperone Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.9E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 SUPERFAMILY SSF46785 5 114 3.79E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 Gene3D G3DSA:3.40.190.10 163 268 4.0E-39 T 14-10-2018 Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 Gene3D G3DSA:1.10.10.10 6 98 5.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 6 296 1.3E-133 T 14-10-2018 IPR017786 Transcription factor, choline sulphate-utilisation, putative Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 SUPERFAMILY SSF53850 91 296 7.24E-28 T 14-10-2018 Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 Pfam PF03466 LysR substrate binding domain 90 296 1.1E-24 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4646 f37dc624c4eae8e7f80eebf5b01fa00d 298 Gene3D G3DSA:3.40.190.10 103 293 4.0E-39 T 14-10-2018 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 Gene3D G3DSA:3.30.860.10 1 92 1.8E-38 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 Pfam PF00203 Ribosomal protein S19 3 83 9.2E-35 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.05 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.3E-41 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 SUPERFAMILY SSF54570 3 84 1.14E-33 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 PIRSF PIRSF002144 1 92 3.5E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.8E-20 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.8E-20 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1942 1a52cf8be2a898f0e6265dafd6fa6fdd 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.8E-20 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu6046 8d759997a08eb1c50d0a7de6a26ec8dc 370 ProSitePatterns PS00398 Site-specific recombinases signature 2. 127 139 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atu6046 8d759997a08eb1c50d0a7de6a26ec8dc 370 SUPERFAMILY SSF53041 73 207 4.05E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Atu6046 8d759997a08eb1c50d0a7de6a26ec8dc 370 Gene3D G3DSA:3.40.50.1390 73 197 1.4E-43 T 14-10-2018 Atu6046 8d759997a08eb1c50d0a7de6a26ec8dc 370 ProSitePatterns PS00397 Site-specific recombinases active site. 77 85 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atu6046 8d759997a08eb1c50d0a7de6a26ec8dc 370 SMART SM00857 74 208 1.3E-51 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atu6046 8d759997a08eb1c50d0a7de6a26ec8dc 370 Pfam PF00239 Resolvase, N terminal domain 74 207 1.5E-41 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atu2690 1b37defc7a28c3729b5ddfa693930dcf 162 SUPERFAMILY SSF52833 15 153 1.36E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu2690 1b37defc7a28c3729b5ddfa693930dcf 162 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 1 156 2.8E-58 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 Atu2690 1b37defc7a28c3729b5ddfa693930dcf 162 Pfam PF08534 Redoxin 21 145 2.9E-14 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atu2690 1b37defc7a28c3729b5ddfa693930dcf 162 Gene3D G3DSA:3.40.30.10 2 160 6.0E-38 T 14-10-2018 Atu4761 e9fe85f066e35bb627fd611ae9e8482b 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu4761 e9fe85f066e35bb627fd611ae9e8482b 467 PIRSF PIRSF000521 21 456 8.6E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu4761 e9fe85f066e35bb627fd611ae9e8482b 467 Pfam PF00202 Aminotransferase class-III 35 452 5.8E-90 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu4761 e9fe85f066e35bb627fd611ae9e8482b 467 SUPERFAMILY SSF53383 33 453 3.45E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4761 e9fe85f066e35bb627fd611ae9e8482b 467 Gene3D G3DSA:3.90.1150.10 12 453 2.0E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu4761 e9fe85f066e35bb627fd611ae9e8482b 467 Gene3D G3DSA:3.40.640.10 69 348 2.0E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu2285 e0a651f578dba191953ff114941cd63a 238 SUPERFAMILY SSF75516 7 168 1.57E-21 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu2285 e0a651f578dba191953ff114941cd63a 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 SUPERFAMILY SSF46894 167 237 6.12E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 Gene3D G3DSA:1.10.10.10 175 238 3.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2285 e0a651f578dba191953ff114941cd63a 238 Gene3D G3DSA:3.30.450.80 7 171 2.2E-12 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu2285 e0a651f578dba191953ff114941cd63a 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 191 218 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 229 1.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 SMART SM00421 174 231 2.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2285 e0a651f578dba191953ff114941cd63a 238 Pfam PF03472 Autoinducer binding domain 20 162 1.5E-16 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Atu5336 0f314141fb1ad7b72df750e923706768 117 Pfam PF06249 Ethanolamine utilisation protein EutQ 53 111 8.6E-8 T 14-10-2018 IPR010424 Ethanolamine utilisation EutQ Atu5336 0f314141fb1ad7b72df750e923706768 117 Gene3D G3DSA:2.60.120.10 1 116 3.0E-36 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu5336 0f314141fb1ad7b72df750e923706768 117 SUPERFAMILY SSF51182 18 111 4.64E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu1868 606d71c18bf35f2a72283eeced2957af 277 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 16 249 1.6E-53 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Atu1868 606d71c18bf35f2a72283eeced2957af 277 Gene3D G3DSA:3.40.1280.10 11 175 3.3E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu1868 606d71c18bf35f2a72283eeced2957af 277 SUPERFAMILY SSF75217 14 171 2.94E-33 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu1868 606d71c18bf35f2a72283eeced2957af 277 PIRSF PIRSF004808 9 257 1.7E-86 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Atu1868 606d71c18bf35f2a72283eeced2957af 277 Pfam PF00588 SpoU rRNA Methylase family 16 166 4.6E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atu1868 606d71c18bf35f2a72283eeced2957af 277 Gene3D G3DSA:1.10.8.590 181 258 6.2E-9 T 14-10-2018 Atu1307 e3ebafe4353564a45b8f1c6bbfd8f071 430 SUPERFAMILY SSF51556 62 373 6.31E-92 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu1307 e3ebafe4353564a45b8f1c6bbfd8f071 430 Pfam PF01979 Amidohydrolase family 59 426 2.6E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu1307 e3ebafe4353564a45b8f1c6bbfd8f071 430 SUPERFAMILY SSF51338 5 427 1.31E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu1307 e3ebafe4353564a45b8f1c6bbfd8f071 430 Gene3D G3DSA:2.30.40.10 11 426 2.4E-115 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu1307 e3ebafe4353564a45b8f1c6bbfd8f071 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 30 427 3.6E-101 T 14-10-2018 Atu1307 e3ebafe4353564a45b8f1c6bbfd8f071 430 Gene3D G3DSA:3.20.20.140 63 373 2.4E-115 T 14-10-2018 Atu8025 6573b945f7632d432a266416d1babe33 62 SUPERFAMILY SSF47598 13 52 1.17E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu1508 22a2c5ac45b00cfb19e30676fc4f3066 209 Pfam PF01914 MarC family integral membrane protein 6 207 8.6E-55 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Atu1508 22a2c5ac45b00cfb19e30676fc4f3066 209 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 203 1.9E-51 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Atu1750 ab4fa9b965dbc6b0f843c9b65c5aa6a1 150 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 19 124 31.095 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Atu1750 ab4fa9b965dbc6b0f843c9b65c5aa6a1 150 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 45 120 4.0E-33 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Atu1750 ab4fa9b965dbc6b0f843c9b65c5aa6a1 150 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 68 120 2.0E-26 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Atu1750 ab4fa9b965dbc6b0f843c9b65c5aa6a1 150 SUPERFAMILY SSF141734 22 127 2.22E-44 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Atu1750 ab4fa9b965dbc6b0f843c9b65c5aa6a1 150 Gene3D G3DSA:3.10.20.400 10 111 1.2E-35 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 Gene3D G3DSA:3.20.20.80 5 374 1.7E-148 T 14-10-2018 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 Pfam PF00128 Alpha amylase, catalytic domain 24 369 2.2E-25 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 SUPERFAMILY SSF51445 6 375 7.6E-91 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 SUPERFAMILY SSF51011 405 491 2.16E-27 T 14-10-2018 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 PIRSF PIRSF001021 1 495 6.4E-215 T 14-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 Gene3D G3DSA:2.40.30.140 104 209 1.7E-148 T 14-10-2018 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 SMART SM00642 4 402 4.8E-52 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu3914 3dec781896dcd24c1d538b3b4e3dfc4b 495 Gene3D G3DSA:2.60.40.1180 408 491 3.8E-27 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu5501 c079177670aca7c32180f3bd8ab87032 220 Gene3D G3DSA:3.90.550.10 20 215 1.9E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu5501 c079177670aca7c32180f3bd8ab87032 220 SUPERFAMILY SSF53448 22 209 9.91E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu5501 c079177670aca7c32180f3bd8ab87032 220 Pfam PF12804 MobA-like NTP transferase domain 24 186 4.3E-38 T 14-10-2018 IPR025877 MobA-like NTP transferase Atu3671 16e136001139df821938320e2c182f04 355 Gene3D G3DSA:3.20.20.30 1 345 3.6E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3671 16e136001139df821938320e2c182f04 355 SUPERFAMILY SSF51679 1 342 4.19E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3671 16e136001139df821938320e2c182f04 355 Pfam PF00296 Luciferase-like monooxygenase 1 317 8.9E-43 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3671 16e136001139df821938320e2c182f04 355 TIGRFAM TIGR04020 seco_metab_LLM: natural product biosynthesis luciferase-like monooxygenase domain 3 341 1.3E-144 T 14-10-2018 IPR024011 Natural product biosynthesis luciferase-like monooxygenase domain Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 SUPERFAMILY SSF46785 5 64 2.65E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.8E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.8E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.8E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 Gene3D G3DSA:3.30.70.920 59 142 8.5E-25 T 14-10-2018 Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 5.0E-23 T 14-10-2018 Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 SUPERFAMILY SSF54909 67 150 1.61E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 Gene3D G3DSA:1.10.10.10 1 58 1.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 SMART SM00344 5 114 1.3E-53 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu4818 ac7150c7135fd26332f86c51eaaf77d7 172 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 4.4E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu5167 eeba9ac3427aa04f3a52ac2b9633f00f 311 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 39 252 5.3E-50 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Atu0953 93c676603fd973a23049545254cf0a26 102 SUPERFAMILY SSF54909 2 92 1.68E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0953 93c676603fd973a23049545254cf0a26 102 Pfam PF07876 Stress responsive A/B Barrel Domain 2 92 1.4E-20 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel Atu0953 93c676603fd973a23049545254cf0a26 102 Gene3D G3DSA:3.30.70.100 1 92 2.6E-13 T 14-10-2018 Atu0953 93c676603fd973a23049545254cf0a26 102 SMART SM00886 2 93 1.3E-18 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel Atu0470 acf203fe3dfed8905d26feaa4dcdb3c4 86 SUPERFAMILY SSF160272 1 69 9.68E-5 T 14-10-2018 IPR036692 Shew3726-like superfamily Atu0470 acf203fe3dfed8905d26feaa4dcdb3c4 86 Pfam PF07369 Protein of unknown function (DUF1488) 3 77 8.5E-18 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 Atu0322 1b586684543f325c6e37f98485474f34 253 Gene3D G3DSA:3.90.226.10 1 194 3.1E-76 T 14-10-2018 Atu0322 1b586684543f325c6e37f98485474f34 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 94 114 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Atu0322 1b586684543f325c6e37f98485474f34 253 SUPERFAMILY SSF52096 2 253 1.61E-91 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu0322 1b586684543f325c6e37f98485474f34 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 6 252 3.1E-82 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Atu0322 1b586684543f325c6e37f98485474f34 253 Gene3D G3DSA:1.10.12.10 196 252 3.2E-27 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1151 1347 4.6E-10 T 14-10-2018 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Gene3D G3DSA:3.30.70.3290 482 906 2.5E-136 T 14-10-2018 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 38 287 7.1E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 417 535 6.8E-15 T 14-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SUPERFAMILY SSF51735 928 1128 1.46E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SUPERFAMILY SSF47336 1421 1495 7.98E-19 T 14-10-2018 IPR036736 ACP-like superfamily Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Gene3D G3DSA:3.40.47.10 34 468 2.6E-145 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1453 1468 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 569 860 8.2E-99 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SUPERFAMILY SSF52151 566 849 6.28E-65 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Gene3D G3DSA:3.40.366.10 567 866 2.5E-136 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Gene3D G3DSA:3.40.50.1820 1417 1517 3.8E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SMART SM00825 Beta-ketoacyl synthase 40 468 1.1E-147 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SUPERFAMILY SSF55048 692 752 2.88E-10 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SMART SM00823 Phosphopantetheine attachment site 1429 1499 1.2E-7 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Gene3D G3DSA:3.40.50.720 907 1409 1.1E-56 T 14-10-2018 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 295 414 2.9E-37 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SUPERFAMILY SSF53901 34 463 1.35E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 SUPERFAMILY SSF51735 1150 1387 2.75E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Pfam PF08659 KR domain 1152 1347 6.2E-22 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Pfam PF00698 Acyl transferase domain 567 853 8.3E-51 T 14-10-2018 IPR014043 Acyl transferase Atu3672 f1389c02a2f674fed539ebe31862d291 1520 Pfam PF00550 Phosphopantetheine attachment site 1431 1495 3.8E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu5422 8e238c2e88f61ec882d6c0e4c8be4cb2 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 253 4.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5422 8e238c2e88f61ec882d6c0e4c8be4cb2 263 Gene3D G3DSA:1.10.3720.10 8 262 2.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu5422 8e238c2e88f61ec882d6c0e4c8be4cb2 263 SUPERFAMILY SSF161098 10 261 2.15E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 319 1.9E-112 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 Pfam PF12327 FtsZ family, C-terminal domain 224 318 3.3E-28 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 SUPERFAMILY SSF55307 207 319 8.01E-36 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 SUPERFAMILY SSF52490 15 210 2.49E-67 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 SMART SM00864 15 207 1.4E-97 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 Gene3D G3DSA:3.40.50.1440 12 319 1.7E-111 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 ProSitePatterns PS01134 FtsZ protein signature 1. 46 80 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 PRINTS PR00423 Cell division protein FtsZ signature 191 213 2.8E-45 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 PRINTS PR00423 Cell division protein FtsZ signature 214 235 2.8E-45 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 PRINTS PR00423 Cell division protein FtsZ signature 128 149 2.8E-45 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 PRINTS PR00423 Cell division protein FtsZ signature 100 120 2.8E-45 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 175 3.7E-42 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 SMART SM00865 209 320 1.7E-36 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 320 34.728 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Atu4673 f7cd80c859c99e2fcfc45d5a1ae577ea 320 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Atu4088 ff586b40de0de0374930ca245b0d434c 192 Pfam PF12802 MarR family 28 82 1.5E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4088 ff586b40de0de0374930ca245b0d434c 192 PIRSF PIRSF006707 1 178 3.4E-54 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type Atu4088 ff586b40de0de0374930ca245b0d434c 192 SUPERFAMILY SSF46785 5 149 8.88E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4088 ff586b40de0de0374930ca245b0d434c 192 Gene3D G3DSA:1.10.10.10 6 87 3.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4806 f81ab192d3957767fd682e8cbdc76a4a 319 SUPERFAMILY SSF53448 4 219 5.98E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4806 f81ab192d3957767fd682e8cbdc76a4a 319 Gene3D G3DSA:3.90.550.10 1 236 1.0E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4806 f81ab192d3957767fd682e8cbdc76a4a 319 Pfam PF00535 Glycosyl transferase family 2 5 134 7.0E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu6145 f8b0034833916eca320ee16460f3f2b4 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 7.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 7.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 7.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 7.0E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 Gene3D G3DSA:3.30.540.10 1 148 4.3E-41 T 14-10-2018 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 Pfam PF00459 Inositol monophosphatase family 15 232 3.1E-46 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 SUPERFAMILY SSF56655 15 265 4.19E-62 T 14-10-2018 Atu6145 f8b0034833916eca320ee16460f3f2b4 272 Gene3D G3DSA:3.40.190.80 153 270 4.5E-12 T 14-10-2018 Atu0688 a807639e888fd33f1f18ffbd7bef315e 152 SUPERFAMILY SSF53927 4 149 5.31E-48 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atu0688 a807639e888fd33f1f18ffbd7bef315e 152 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 46.936 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Atu0688 a807639e888fd33f1f18ffbd7bef315e 152 Pfam PF14437 MafB19-like deaminase 5 148 4.2E-29 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Atu0688 a807639e888fd33f1f18ffbd7bef315e 152 Gene3D G3DSA:3.40.140.10 1 144 1.3E-57 T 14-10-2018 Atu0688 a807639e888fd33f1f18ffbd7bef315e 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Atu0705 a297101626038f1dcd295fdc686609b0 257 SUPERFAMILY SSF51735 17 256 2.23E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 256 2.9E-53 T 14-10-2018 Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.1E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0705 a297101626038f1dcd295fdc686609b0 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu0705 a297101626038f1dcd295fdc686609b0 257 Gene3D G3DSA:3.40.50.720 4 257 7.9E-66 T 14-10-2018 Atu1855 24a5bb9ec07e7501e118e95936b41176 402 SUPERFAMILY SSF103473 7 385 7.19E-56 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1855 24a5bb9ec07e7501e118e95936b41176 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 385 4.6E-76 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Atu1855 24a5bb9ec07e7501e118e95936b41176 402 Pfam PF07690 Major Facilitator Superfamily 12 355 1.5E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1855 24a5bb9ec07e7501e118e95936b41176 402 Gene3D G3DSA:1.20.1720.10 7 387 1.2E-90 T 14-10-2018 Atu2268 4b51739029d61769c5b29a9d01cf6239 169 Gene3D G3DSA:1.10.1740.10 1 83 5.1E-17 T 14-10-2018 Atu2268 4b51739029d61769c5b29a9d01cf6239 169 Pfam PF08281 Sigma-70, region 4 109 159 2.4E-7 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu2268 4b51739029d61769c5b29a9d01cf6239 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 5.8E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu2268 4b51739029d61769c5b29a9d01cf6239 169 Gene3D G3DSA:1.10.10.10 86 167 8.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2268 4b51739029d61769c5b29a9d01cf6239 169 SUPERFAMILY SSF88659 86 167 5.42E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu2268 4b51739029d61769c5b29a9d01cf6239 169 SUPERFAMILY SSF88946 2 99 3.34E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu2268 4b51739029d61769c5b29a9d01cf6239 169 Pfam PF04542 Sigma-70 region 2 16 85 1.8E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu3817 fe07ac22846e1eb0db5c728a61c392c8 503 SMART SM00858 11 78 1.6E-13 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu3817 fe07ac22846e1eb0db5c728a61c392c8 503 Pfam PF08666 SAF domain 11 77 2.9E-12 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu3817 fe07ac22846e1eb0db5c728a61c392c8 503 Gene3D G3DSA:3.90.1210.30 3 80 1.1E-24 T 14-10-2018 Atu3817 fe07ac22846e1eb0db5c728a61c392c8 503 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 105 501 8.4E-156 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 Atu1534 4b6cfe586a705ebededad21a43673bac 287 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 204 280 7.2E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1534 4b6cfe586a705ebededad21a43673bac 287 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 112 192 1.0E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1534 4b6cfe586a705ebededad21a43673bac 287 Gene3D G3DSA:1.10.760.10 173 260 5.0E-66 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1534 4b6cfe586a705ebededad21a43673bac 287 SUPERFAMILY SSF46626 199 286 2.16E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1534 4b6cfe586a705ebededad21a43673bac 287 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 8 287 2.7E-115 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Atu1534 4b6cfe586a705ebededad21a43673bac 287 SUPERFAMILY SSF46626 30 201 3.4E-30 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1534 4b6cfe586a705ebededad21a43673bac 287 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 11 57 3.9E-26 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Atu1534 4b6cfe586a705ebededad21a43673bac 287 Gene3D G3DSA:1.10.760.10 82 283 5.0E-66 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1534 4b6cfe586a705ebededad21a43673bac 287 PIRSF PIRSF000006 1 287 2.0E-118 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Atu1534 4b6cfe586a705ebededad21a43673bac 287 PRINTS PR00605 Class IC cytochrome C signature 214 225 6.0E-7 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Atu1534 4b6cfe586a705ebededad21a43673bac 287 PRINTS PR00605 Class IC cytochrome C signature 258 280 6.0E-7 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Atu1534 4b6cfe586a705ebededad21a43673bac 287 Gene3D G3DSA:1.20.58.1490 1 69 9.8E-22 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Atu0957 b86811a04951a6dd45363e11e85006f5 422 Gene3D G3DSA:3.30.2320.10 279 383 4.7E-6 T 14-10-2018 Atu0957 b86811a04951a6dd45363e11e85006f5 422 SUPERFAMILY SSF56563 128 419 1.7E-74 T 14-10-2018 Atu0957 b86811a04951a6dd45363e11e85006f5 422 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 25 419 7.8E-120 T 14-10-2018 IPR024455 Phage capsid Atu0957 b86811a04951a6dd45363e11e85006f5 422 Pfam PF05065 Phage capsid family 134 419 8.3E-87 T 14-10-2018 IPR024455 Phage capsid Atu1110 06602da0320df31483018f9ef4ce5749 497 PRINTS PR00481 Cytosol aminopeptidase signature 339 359 2.6E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 PRINTS PR00481 Cytosol aminopeptidase signature 258 275 2.6E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 PRINTS PR00481 Cytosol aminopeptidase signature 317 338 2.6E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 2.6E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 PRINTS PR00481 Cytosol aminopeptidase signature 280 301 2.6E-50 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 SUPERFAMILY SSF53187 176 493 5.02E-120 T 14-10-2018 Atu1110 06602da0320df31483018f9ef4ce5749 497 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 487 1.1E-122 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 144 2.8E-23 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 Gene3D G3DSA:3.40.220.10 3 158 7.2E-22 T 14-10-2018 Atu1110 06602da0320df31483018f9ef4ce5749 497 SUPERFAMILY SSF52949 7 181 1.35E-20 T 14-10-2018 Atu1110 06602da0320df31483018f9ef4ce5749 497 Gene3D G3DSA:3.40.630.10 162 496 8.7E-131 T 14-10-2018 Atu1110 06602da0320df31483018f9ef4ce5749 497 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 496 35.428 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Atu1110 06602da0320df31483018f9ef4ce5749 497 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 343 350 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 82 7.6E-20 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 49 3.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 80 3.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 Gene3D G3DSA:1.10.357.10 86 225 1.5E-28 T 14-10-2018 Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 Gene3D G3DSA:1.10.10.60 25 80 1.7E-19 T 14-10-2018 Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 168 223 4.3E-17 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 ProSitePatterns PS01081 TetR-type HTH domain signature. 48 78 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu4477 31a26db8a2bf9be1d223ad351c49bb19 228 SUPERFAMILY SSF46689 28 104 1.74E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 Gene3D G3DSA:1.10.10.10 1 57 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 SMART SM00344 4 113 2.1E-30 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 SUPERFAMILY SSF46785 4 61 3.69E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 3.1E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 Gene3D G3DSA:3.30.70.920 58 140 8.9E-19 T 14-10-2018 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.3E-15 T 14-10-2018 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.9E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3476 5ee21b362ddfd050fcd7132a41adbac5 157 SUPERFAMILY SSF54909 66 147 1.88E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1438 ae2588c09fec96caf1e116dcfa30fc43 244 Gene3D G3DSA:1.10.10.60 147 242 3.6E-24 T 14-10-2018 Atu1438 ae2588c09fec96caf1e116dcfa30fc43 244 SUPERFAMILY SSF46689 191 240 3.05E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1438 ae2588c09fec96caf1e116dcfa30fc43 244 SMART SM00342 155 238 3.1E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1438 ae2588c09fec96caf1e116dcfa30fc43 244 Pfam PF12833 Helix-turn-helix domain 161 240 5.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu2282 a807b23627590c5c5e0d4c717b273be5 163 Pfam PF00265 Thymidine kinase 1 156 2.8E-39 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Atu2282 a807b23627590c5c5e0d4c717b273be5 163 Gene3D G3DSA:3.40.50.300 1 111 3.6E-17 T 14-10-2018 Atu2282 a807b23627590c5c5e0d4c717b273be5 163 SUPERFAMILY SSF52540 1 111 1.58E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2282 a807b23627590c5c5e0d4c717b273be5 163 PIRSF PIRSF035805 1 162 1.7E-42 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Atu2282 a807b23627590c5c5e0d4c717b273be5 163 SUPERFAMILY SSF57716 112 159 1.19E-14 T 14-10-2018 Atu2282 a807b23627590c5c5e0d4c717b273be5 163 Gene3D G3DSA:3.30.60.20 113 158 1.3E-6 T 14-10-2018 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 Gene3D G3DSA:3.20.20.20 9 295 4.1E-94 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 PIRSF PIRSF004640 6 412 3.4E-125 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 SUPERFAMILY SSF56014 301 387 4.32E-5 T 14-10-2018 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 10 404 29.425 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 12 400 2.2E-128 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 Gene3D G3DSA:3.30.413.10 296 413 5.8E-35 T 14-10-2018 Atu2723 d3d2308884c936bfee6a84e4794ee5fa 416 Pfam PF04551 GcpE protein 17 388 1.3E-107 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Atu2577 a84a4feb7d70151faa7879894b4f530c 905 Gene3D G3DSA:3.40.50.300 366 500 1.7E-16 T 14-10-2018 Atu2577 a84a4feb7d70151faa7879894b4f530c 905 Gene3D G3DSA:3.40.50.300 708 905 2.7E-19 T 14-10-2018 Atu2577 a84a4feb7d70151faa7879894b4f530c 905 SUPERFAMILY SSF90123 7 352 7.06E-42 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2577 a84a4feb7d70151faa7879894b4f530c 905 Pfam PF00664 ABC transporter transmembrane region 87 311 5.6E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu2577 a84a4feb7d70151faa7879894b4f530c 905 SUPERFAMILY SSF52540 369 889 2.26E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2577 a84a4feb7d70151faa7879894b4f530c 905 Gene3D G3DSA:1.20.1560.10 3 348 3.5E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2577 a84a4feb7d70151faa7879894b4f530c 905 Pfam PF00005 ABC transporter 386 486 9.1E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Gene3D G3DSA:1.10.1750.10 417 519 5.8E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Gene3D G3DSA:3.30.300.180 32 113 2.2E-10 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 SUPERFAMILY SSF52540 176 393 2.83E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Pfam PF11638 DnaA N-terminal domain 38 99 3.9E-18 T 14-10-2018 IPR024633 DnaA N-terminal domain Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 SUPERFAMILY SSF48295 417 516 1.6E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Gene3D G3DSA:3.40.50.300 170 341 1.3E-39 T 14-10-2018 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Pfam PF00308 Bacterial dnaA protein 176 399 5.0E-84 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 SMART SM00760 425 494 1.5E-39 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 ProSitePatterns PS01008 DnaA protein signature. 475 494 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Gene3D G3DSA:1.10.8.60 343 416 2.1E-5 T 14-10-2018 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 211 231 4.8E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 308 335 4.8E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 243 257 4.8E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 275 289 4.8E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 475 494 4.8E-42 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 SMART SM00382 210 341 1.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 41 514 2.7E-146 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 37 516 28.575 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Atu0324 8a30d66998f3ef739acd1ca76a87da8a 520 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 426 494 7.3E-31 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Atu3633 358c7d96abfda1aea49cf3e55f599327 374 SUPERFAMILY SSF52540 5 190 1.39E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3633 358c7d96abfda1aea49cf3e55f599327 374 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 187 2.5E-45 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Atu3633 358c7d96abfda1aea49cf3e55f599327 374 Gene3D G3DSA:3.30.1220.10 232 349 6.6E-19 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Atu3633 358c7d96abfda1aea49cf3e55f599327 374 Gene3D G3DSA:3.40.50.300 3 206 4.0E-57 T 14-10-2018 Atu3633 358c7d96abfda1aea49cf3e55f599327 374 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 253 348 6.8E-17 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu3633 358c7d96abfda1aea49cf3e55f599327 374 SUPERFAMILY SSF90002 253 348 1.96E-18 T 14-10-2018 Atu3633 358c7d96abfda1aea49cf3e55f599327 374 SMART SM00833 253 349 2.6E-26 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu0106 9abea12d691c7447e2b86bd6937fc528 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site Atu0106 9abea12d691c7447e2b86bd6937fc528 69 PIRSF PIRSF002599 1 68 2.7E-21 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Atu0106 9abea12d691c7447e2b86bd6937fc528 69 Gene3D G3DSA:2.40.50.140 1 67 2.3E-23 T 14-10-2018 Atu0106 9abea12d691c7447e2b86bd6937fc528 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.5E-22 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu0106 9abea12d691c7447e2b86bd6937fc528 69 SMART SM00357 3 69 7.2E-21 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu0106 9abea12d691c7447e2b86bd6937fc528 69 SUPERFAMILY SSF50249 1 67 1.67E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0106 9abea12d691c7447e2b86bd6937fc528 69 PRINTS PR00050 Cold shock protein signature 40 58 6.7E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu0106 9abea12d691c7447e2b86bd6937fc528 69 PRINTS PR00050 Cold shock protein signature 4 19 6.7E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu0106 9abea12d691c7447e2b86bd6937fc528 69 PRINTS PR00050 Cold shock protein signature 25 34 6.7E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 SUPERFAMILY SSF57716 16 51 1.2E-11 T 14-10-2018 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 SMART SM01086 317 412 8.6E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Pfam PF06689 ClpX C4-type zinc finger 16 53 6.1E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 53.791 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 SMART SM00994 15 54 1.7E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Gene3D G3DSA:3.40.50.300 59 315 2.0E-108 T 14-10-2018 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Gene3D G3DSA:1.10.8.60 316 424 4.4E-41 T 14-10-2018 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Gene3D G3DSA:3.30.50.30 6 54 2.8E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 SUPERFAMILY SSF52540 66 402 2.1E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 SMART SM00382 113 266 5.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 13 409 2.0E-201 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 310 2.2E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu1259 6d63daad6d633a3cf89e18eed4dd07b3 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 389 1.0E-16 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu4693 995b8c43b36927da66b63763a76d4cbf 355 SUPERFAMILY SSF56935 55 341 5.68E-18 T 14-10-2018 Atu4693 995b8c43b36927da66b63763a76d4cbf 355 Pfam PF02530 Porin subfamily 24 341 5.9E-106 T 14-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 297 2.3E-142 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 Gene3D G3DSA:1.20.58.180 214 301 2.7E-29 T 14-10-2018 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 297 2.3E-136 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 Gene3D G3DSA:3.30.930.10 1 213 4.7E-107 T 14-10-2018 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 SUPERFAMILY SSF55681 6 298 8.7E-125 T 14-10-2018 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 302 58.114 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 9.0E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 9.0E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 9.0E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 9.0E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0639 23cf39ab8534eb3360387e4cf042462c 310 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 9.0E-55 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu6162 102f22a6e8bc447238fd419e1c3a6034 236 Gene3D G3DSA:3.40.1410.10 53 190 8.9E-10 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu6162 102f22a6e8bc447238fd419e1c3a6034 236 SUPERFAMILY SSF64288 52 222 4.79E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu5338 21e64f6fab700f8f58d9de8ca48ce69b 264 Gene3D G3DSA:1.10.10.60 152 256 3.9E-20 T 14-10-2018 Atu5338 21e64f6fab700f8f58d9de8ca48ce69b 264 SMART SM00342 169 251 4.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5338 21e64f6fab700f8f58d9de8ca48ce69b 264 SUPERFAMILY SSF46689 209 253 1.08E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5338 21e64f6fab700f8f58d9de8ca48ce69b 264 Pfam PF12833 Helix-turn-helix domain 175 251 3.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5338 21e64f6fab700f8f58d9de8ca48ce69b 264 Gene3D G3DSA:2.60.120.10 2 91 4.6E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu5338 21e64f6fab700f8f58d9de8ca48ce69b 264 SUPERFAMILY SSF51182 13 178 4.78E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu2476 88969a6414545c99b32699024499d2b6 252 Gene3D G3DSA:3.40.50.300 1 249 7.6E-63 T 14-10-2018 Atu2476 88969a6414545c99b32699024499d2b6 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2476 88969a6414545c99b32699024499d2b6 252 SMART SM00382 26 213 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2476 88969a6414545c99b32699024499d2b6 252 Pfam PF00005 ABC transporter 18 164 5.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2476 88969a6414545c99b32699024499d2b6 252 SUPERFAMILY SSF52540 2 225 4.37E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4694 54303f29c62c4b8906917c9e3125027e 505 Gene3D G3DSA:2.30.40.10 10 438 9.4E-104 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4694 54303f29c62c4b8906917c9e3125027e 505 SUPERFAMILY SSF51338 4 448 1.44E-31 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4694 54303f29c62c4b8906917c9e3125027e 505 SUPERFAMILY SSF51556 61 383 1.09E-46 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu4694 54303f29c62c4b8906917c9e3125027e 505 Gene3D G3DSA:3.20.20.140 63 381 9.4E-104 T 14-10-2018 Atu4694 54303f29c62c4b8906917c9e3125027e 505 Pfam PF01979 Amidohydrolase family 59 431 8.8E-29 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu1463 6f6d81c5e552aa7a1e746d6c3f2dbca8 120 Gene3D G3DSA:2.40.50.100 1 120 1.2E-46 T 14-10-2018 Atu1463 6f6d81c5e552aa7a1e746d6c3f2dbca8 120 Pfam PF01597 Glycine cleavage H-protein 2 119 3.1E-43 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Atu1463 6f6d81c5e552aa7a1e746d6c3f2dbca8 120 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 119 8.3E-45 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Atu1463 6f6d81c5e552aa7a1e746d6c3f2dbca8 120 SUPERFAMILY SSF51230 2 119 2.55E-42 T 14-10-2018 IPR011053 Single hybrid motif Atu1463 6f6d81c5e552aa7a1e746d6c3f2dbca8 120 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 120 38.658 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Atu1463 6f6d81c5e552aa7a1e746d6c3f2dbca8 120 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 42 71 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atu4315 152a00b621ef43c928a8dba9a7479053 294 Pfam PF00551 Formyl transferase 86 263 2.0E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu4315 152a00b621ef43c928a8dba9a7479053 294 Gene3D G3DSA:3.40.50.170 86 281 4.1E-67 T 14-10-2018 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 1.8E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.8E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.8E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 1.8E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 1.8E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 1.8E-50 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 Gene3D G3DSA:3.30.70.260 1 85 2.6E-25 T 14-10-2018 Atu4315 152a00b621ef43c928a8dba9a7479053 294 SUPERFAMILY SSF53328 86 282 4.84E-58 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu4315 152a00b621ef43c928a8dba9a7479053 294 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 281 1.9E-99 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 281 46.439 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu4315 152a00b621ef43c928a8dba9a7479053 294 PIRSF PIRSF036480 1 282 1.0E-108 T 14-10-2018 Atu4315 152a00b621ef43c928a8dba9a7479053 294 SUPERFAMILY SSF55021 3 85 3.33E-16 T 14-10-2018 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 Gene3D G3DSA:3.40.50.20 3 85 1.1E-26 T 14-10-2018 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 Gene3D G3DSA:3.30.1490.20 112 177 1.4E-65 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 Pfam PF07478 D-ala D-ala ligase C-terminus 127 302 4.6E-43 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 64 75 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 SUPERFAMILY SSF56059 97 304 1.85E-48 T 14-10-2018 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 305 34.146 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 Gene3D G3DSA:3.30.470.20 87 300 1.4E-65 T 14-10-2018 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 Pfam PF01820 D-ala D-ala ligase N-terminus 6 85 8.1E-16 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 PIRSF PIRSF039102 44 307 1.2E-70 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 PIRSF PIRSF039102 1 55 5.5E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 SUPERFAMILY SSF52440 4 97 2.21E-30 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu2089 a472ed712758aab8d282d200b21f1fd7 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 304 4.5E-85 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2089 a472ed712758aab8d282d200b21f1fd7 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 243 275 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2652 ebdd4d413c41062b632821049e97a786 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 1.4E-70 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.9E-104 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 Gene3D G3DSA:3.40.190.10 7 212 1.9E-74 T 14-10-2018 Atu2652 ebdd4d413c41062b632821049e97a786 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 296 4.3E-16 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 Gene3D G3DSA:3.30.160.40 223 307 3.4E-25 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 PIRSF PIRSF001438 1 309 1.7E-108 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 PRINTS PR00151 Porphobilinogen deaminase signature 47 67 3.3E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 3.3E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 PRINTS PR00151 Porphobilinogen deaminase signature 78 97 3.3E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 3.3E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 3.3E-40 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 299 36.911 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2652 ebdd4d413c41062b632821049e97a786 309 SUPERFAMILY SSF53850 5 221 1.34E-74 T 14-10-2018 Atu2652 ebdd4d413c41062b632821049e97a786 309 Gene3D G3DSA:3.40.190.10 105 204 1.9E-74 T 14-10-2018 Atu2652 ebdd4d413c41062b632821049e97a786 309 SUPERFAMILY SSF54782 222 308 4.84E-23 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 SUPERFAMILY SSF53850 25 531 6.33E-148 T 14-10-2018 Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 PIRSF PIRSF002741 7 534 4.9E-118 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 Gene3D G3DSA:3.90.76.10 48 207 1.2E-169 T 14-10-2018 Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 450 1.4E-96 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 Gene3D G3DSA:3.40.190.10 208 521 1.2E-169 T 14-10-2018 Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 Gene3D G3DSA:3.10.105.10 289 508 1.2E-169 T 14-10-2018 Atu4113 a527e9f16bb2fae0421d476d8e517e43 534 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 75 97 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 Gene3D G3DSA:3.30.390.30 348 468 5.6E-49 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 468 2.1E-177 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 6.3E-42 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 330 2.6E-68 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 SUPERFAMILY SSF55424 345 467 7.39E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 Gene3D G3DSA:3.50.50.60 148 273 7.6E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PIRSF PIRSF000350 1 467 6.2E-92 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 SUPERFAMILY SSF51905 3 324 3.74E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.0E-40 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.0E-40 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 2.0E-40 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.0E-40 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.0E-40 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 2.2E-79 T 14-10-2018 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atu2632 9fcb0e44858faa24bef6eb90bdfa576e 468 Gene3D G3DSA:3.50.50.60 3 330 7.6E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4387 304ebaac864f97e7972126c8ae1acc04 270 Pfam PF07728 AAA domain (dynein-related subfamily) 37 171 2.9E-34 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Atu4387 304ebaac864f97e7972126c8ae1acc04 270 SUPERFAMILY SSF52540 31 206 7.14E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4387 304ebaac864f97e7972126c8ae1acc04 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 184 268 2.0E-31 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Atu4387 304ebaac864f97e7972126c8ae1acc04 270 Gene3D G3DSA:3.40.50.300 24 189 1.6E-30 T 14-10-2018 Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 470 19.107 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 412 429 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 52 68 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 134 158 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 360 379 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 158 179 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 33 52 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PRINTS PR01806 Virulence factor MviN signature 262 288 2.3E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 512 1.4E-152 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 Pfam PF03023 MviN-like protein 28 470 8.1E-111 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu0347 c94b7519b11c5ac199b42a8081e886c6 529 PIRSF PIRSF002869 1 518 7.3E-139 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 SUPERFAMILY SSF75625 296 394 2.35E-13 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 Gene3D G3DSA:3.20.70.20 83 353 1.2E-57 T 14-10-2018 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 Gene3D G3DSA:3.20.70.20 375 775 7.4E-95 T 14-10-2018 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 Gene3D G3DSA:3.20.70.20 776 928 4.3E-30 T 14-10-2018 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 Pfam PF02867 Ribonucleotide reductase, barrel domain 810 913 3.1E-16 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 126 753 1.7E-143 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 SUPERFAMILY SSF51998 197 925 7.02E-124 T 14-10-2018 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 749 7.0E-107 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 9.6E-5 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 PRINTS PR01183 Ribonucleotide reductase large chain signature 543 565 9.6E-5 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu1733 b5f4e5792d1600f2d5d28593f276cc21 1272 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 1.9E-41 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu4041 1693cf6cba0528d70a4841b6d78c03cc 222 SUPERFAMILY SSF55120 12 219 4.64E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu4041 1693cf6cba0528d70a4841b6d78c03cc 222 Pfam PF00849 RNA pseudouridylate synthase 26 174 3.9E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu4041 1693cf6cba0528d70a4841b6d78c03cc 222 Gene3D G3DSA:3.30.2350.10 9 221 4.1E-67 T 14-10-2018 Atu4041 1693cf6cba0528d70a4841b6d78c03cc 222 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 64 78 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu3261 52b2b4452b3636f3473bee44a2518ee8 606 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 211 601 8.8E-88 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3261 52b2b4452b3636f3473bee44a2518ee8 606 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 203 600 8.6E-84 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu3261 52b2b4452b3636f3473bee44a2518ee8 606 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 158 9.3E-21 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu8126 394acac93e79fc8822bcf88dcdc9dd39 221 Pfam PF09684 Phage tail protein (Tail_P2_I) 8 149 1.1E-29 T 14-10-2018 IPR006521 Tail protein I Atu8126 394acac93e79fc8822bcf88dcdc9dd39 221 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 8 75 6.2E-14 T 14-10-2018 IPR006521 Tail protein I Atu3247 a41009ad336fdf12e01e072fdc485089 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 15.92 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Atu3247 a41009ad336fdf12e01e072fdc485089 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 78 2.9E-21 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Atu3247 a41009ad336fdf12e01e072fdc485089 86 SUPERFAMILY SSF55229 29 81 1.27E-13 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Atu3247 a41009ad336fdf12e01e072fdc485089 86 Gene3D G3DSA:3.30.1070.10 1 79 1.2E-23 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Atu3247 a41009ad336fdf12e01e072fdc485089 86 Pfam PF03776 Septum formation topological specificity factor MinE 12 78 1.0E-20 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 456 8.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 2.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 Gene3D G3DSA:3.30.565.10 310 461 2.8E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 3.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 3.4E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 Gene3D G3DSA:1.10.287.130 191 304 2.8E-13 T 14-10-2018 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 SUPERFAMILY SSF47384 222 303 7.65E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 SMART SM00388 239 304 6.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 SMART SM00387 351 463 4.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 Pfam PF08521 Two-component sensor kinase N-terminal 22 163 6.8E-38 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal Atu2465 7a0c396826515c28ba6b6aa6259c7b31 464 SUPERFAMILY SSF55874 309 457 3.8E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 447 2.3E-132 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 Gene3D G3DSA:3.40.50.620 1 321 5.1E-123 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 201 219 2.4E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 232 253 2.4E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 2.4E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 66 75 2.4E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 SUPERFAMILY SSF47323 330 451 7.98E-23 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 Gene3D G3DSA:1.20.120.640 322 455 2.9E-19 T 14-10-2018 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 331 2.4E-110 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 454 36.04 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 Pfam PF09190 DALR domain 352 394 1.2E-4 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Atu1073 1437bf25dbe4a19b059aab45b9c696ce 461 SUPERFAMILY SSF52374 5 331 1.27E-84 T 14-10-2018 Atu0235 0c94a41c2b2b3173ff021b537885e217 457 SUPERFAMILY SSF53383 62 456 1.14E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu0235 0c94a41c2b2b3173ff021b537885e217 457 Gene3D G3DSA:3.90.1150.10 110 442 5.2E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu0235 0c94a41c2b2b3173ff021b537885e217 457 Gene3D G3DSA:1.10.10.10 5 102 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0235 0c94a41c2b2b3173ff021b537885e217 457 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0235 0c94a41c2b2b3173ff021b537885e217 457 SUPERFAMILY SSF46785 5 71 4.97E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0235 0c94a41c2b2b3173ff021b537885e217 457 Pfam PF00155 Aminotransferase class I and II 118 443 7.2E-36 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu0235 0c94a41c2b2b3173ff021b537885e217 457 Gene3D G3DSA:3.40.640.10 139 355 5.2E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu0235 0c94a41c2b2b3173ff021b537885e217 457 SMART SM00345 9 68 3.4E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 17 27 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PIRSF PIRSF000724 1 400 7.0E-146 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 398 39.178 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 Gene3D G3DSA:3.40.50.1260 12 396 4.1E-145 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 SUPERFAMILY SSF53748 4 397 2.36E-145 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 Pfam PF00162 Phosphoglycerate kinase 7 388 3.4E-145 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 Gene3D G3DSA:3.40.50.1260 171 388 4.1E-145 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3739 a83fd8e9cafe4725548e534ee75cdf67 400 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 9.1E-77 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3290 8bbefe065be1d593926dfb35954f4df2 265 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 260 2.8E-98 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3290 8bbefe065be1d593926dfb35954f4df2 265 SUPERFAMILY SSF53613 2 264 4.37E-81 T 14-10-2018 IPR029056 Ribokinase-like Atu3290 8bbefe065be1d593926dfb35954f4df2 265 Pfam PF08543 Phosphomethylpyrimidine kinase 12 258 5.3E-94 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Atu3290 8bbefe065be1d593926dfb35954f4df2 265 Gene3D G3DSA:3.40.1190.20 1 264 1.0E-98 T 14-10-2018 IPR029056 Ribokinase-like Atu2273 ff2863b4f018766c79319c3456d6bf99 154 PIRSF PIRSF027377 6 140 2.9E-52 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atu2273 ff2863b4f018766c79319c3456d6bf99 154 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 23 133 4.0E-45 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atu2273 ff2863b4f018766c79319c3456d6bf99 154 Pfam PF14489 QueF-like protein 58 135 3.3E-32 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atu2273 ff2863b4f018766c79319c3456d6bf99 154 SUPERFAMILY SSF55620 23 145 1.63E-28 T 14-10-2018 Atu2273 ff2863b4f018766c79319c3456d6bf99 154 Gene3D G3DSA:3.30.1130.10 19 140 2.3E-42 T 14-10-2018 Atu2273 ff2863b4f018766c79319c3456d6bf99 154 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 154 68.661 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 Gene3D G3DSA:3.10.350.10 175 242 1.4E-9 T 14-10-2018 IPR036779 LysM domain superfamily Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 Pfam PF01476 LysM domain 189 231 8.1E-8 T 14-10-2018 IPR018392 LysM domain Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 Pfam PF01476 LysM domain 300 342 1.0E-12 T 14-10-2018 IPR018392 LysM domain Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 SUPERFAMILY SSF51261 353 536 3.03E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 Gene3D G3DSA:3.10.350.10 297 348 2.0E-15 T 14-10-2018 IPR036779 LysM domain superfamily Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 SUPERFAMILY SSF54106 189 231 2.75E-5 T 14-10-2018 Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 SMART SM00257 299 342 4.0E-12 T 14-10-2018 IPR018392 LysM domain Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 SMART SM00257 187 231 3.9E-6 T 14-10-2018 IPR018392 LysM domain Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 Pfam PF01551 Peptidase family M23 438 532 1.9E-27 T 14-10-2018 IPR016047 Peptidase M23 Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 Gene3D G3DSA:2.70.70.10 391 537 3.8E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu1700 b73d771e9835c62fdf8cd395b9789b8e 537 SUPERFAMILY SSF54106 300 342 2.35E-9 T 14-10-2018 Atu1075 20c17b6e0e289da3019ec941854bc14b 502 Pfam PF00156 Phosphoribosyl transferase domain 301 405 2.1E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu1075 20c17b6e0e289da3019ec941854bc14b 502 PIRSF PIRSF000485 24 494 3.9E-160 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Atu1075 20c17b6e0e289da3019ec941854bc14b 502 SUPERFAMILY SSF53271 268 487 1.06E-74 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu1075 20c17b6e0e289da3019ec941854bc14b 502 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 28 480 1.3E-144 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Atu1075 20c17b6e0e289da3019ec941854bc14b 502 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 27 479 44.351 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Atu1075 20c17b6e0e289da3019ec941854bc14b 502 SUPERFAMILY SSF56235 28 245 6.26E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu1075 20c17b6e0e289da3019ec941854bc14b 502 Gene3D G3DSA:3.60.20.10 28 481 2.1E-146 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu1075 20c17b6e0e289da3019ec941854bc14b 502 Pfam PF13537 Glutamine amidotransferase domain 108 225 1.2E-18 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Atu1075 20c17b6e0e289da3019ec941854bc14b 502 Gene3D G3DSA:3.40.50.2020 292 457 2.1E-146 T 14-10-2018 Atu3046 d1396b120c19a5194b72d03c3ab7b7b8 441 SUPERFAMILY SSF51905 31 410 6.09E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3046 d1396b120c19a5194b72d03c3ab7b7b8 441 Gene3D G3DSA:3.50.50.60 32 389 8.5E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3046 d1396b120c19a5194b72d03c3ab7b7b8 441 Gene3D G3DSA:3.30.9.10 126 350 8.5E-59 T 14-10-2018 Atu3046 d1396b120c19a5194b72d03c3ab7b7b8 441 Pfam PF01266 FAD dependent oxidoreductase 32 388 2.1E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3665 5d71cff8315208509a6d94e7df072ba5 248 SUPERFAMILY SSF51735 5 244 4.62E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.7E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.4E-48 T 14-10-2018 Atu3665 5d71cff8315208509a6d94e7df072ba5 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3665 5d71cff8315208509a6d94e7df072ba5 248 Gene3D G3DSA:3.40.50.720 1 246 2.3E-69 T 14-10-2018 Atu2456 a449e3721bce2655c9958203f17438da 131 Gene3D G3DSA:3.10.180.10 1 128 1.5E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2456 a449e3721bce2655c9958203f17438da 131 SUPERFAMILY SSF54593 3 129 2.55E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2456 a449e3721bce2655c9958203f17438da 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 3.2E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 PIRSF PIRSF002162 1 177 2.2E-45 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 Gene3D G3DSA:3.90.930.12 1 82 4.4E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 Gene3D G3DSA:3.90.930.12 83 177 1.7E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 SUPERFAMILY SSF56053 1 82 9.79E-23 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.048 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 Pfam PF00347 Ribosomal protein L6 11 82 8.3E-17 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 Pfam PF00347 Ribosomal protein L6 91 164 1.7E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.8E-72 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atu1931 4735222abe971beaabeb21d9eecb8c0d 177 SUPERFAMILY SSF56053 83 177 2.88E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 SUPERFAMILY SSF53335 179 461 7.52E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 Pfam PF01189 16S rRNA methyltransferase RsmB/F 273 458 1.6E-43 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 Gene3D G3DSA:1.10.940.10 35 178 1.0E-29 T 14-10-2018 IPR035926 NusB-like superfamily Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 Gene3D G3DSA:3.40.50.150 257 461 4.4E-54 T 14-10-2018 Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 Pfam PF01029 NusB family 38 162 1.4E-20 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 SUPERFAMILY SSF48013 38 183 5.07E-26 T 14-10-2018 IPR035926 NusB-like superfamily Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 262 6.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 338 350 6.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 388 404 6.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 277 287 6.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu2825 d2b3d2c436c86aaf5567be72ec264d3a 461 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 443 460 6.6E-21 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Atu1882 cf1503b6e80131ce750fb5c84ee1eb0c 88 Pfam PF06233 Usg-like family 8 86 1.6E-40 T 14-10-2018 IPR009354 Usg-like Atu0557 e1ffd953578b27de46552102b1b19b21 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 167 377 2.1E-70 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu0557 e1ffd953578b27de46552102b1b19b21 473 Gene3D G3DSA:3.40.50.12240 38 456 2.9E-122 T 14-10-2018 Atu0557 e1ffd953578b27de46552102b1b19b21 473 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 43 455 1.5E-191 T 14-10-2018 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu0557 e1ffd953578b27de46552102b1b19b21 473 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 41 446 6.5E-126 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu0557 e1ffd953578b27de46552102b1b19b21 473 SUPERFAMILY SSF52540 113 382 2.76E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0557 e1ffd953578b27de46552102b1b19b21 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu0557 e1ffd953578b27de46552102b1b19b21 473 SMART SM00382 179 361 3.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1001 0f29a98875f4d59bf93320d15d764c71 302 Gene3D G3DSA:3.40.50.10330 6 125 1.1E-22 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Atu1001 0f29a98875f4d59bf93320d15d764c71 302 SUPERFAMILY SSF111331 1 297 1.53E-52 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Atu1001 0f29a98875f4d59bf93320d15d764c71 302 Gene3D G3DSA:2.60.200.40 126 288 6.6E-19 T 14-10-2018 Atu1001 0f29a98875f4d59bf93320d15d764c71 302 SMART SM00046 2 131 0.0029 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Atu1001 0f29a98875f4d59bf93320d15d764c71 302 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 127 3.1E-24 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Atu3010 c9a8d704f5cc1e7d463a29f51fd86fdb 307 SUPERFAMILY SSF55961 20 164 5.71E-20 T 14-10-2018 Atu3010 c9a8d704f5cc1e7d463a29f51fd86fdb 307 SUPERFAMILY SSF55961 163 304 2.24E-35 T 14-10-2018 Atu3010 c9a8d704f5cc1e7d463a29f51fd86fdb 307 Gene3D G3DSA:3.30.530.20 21 162 7.0E-22 T 14-10-2018 IPR023393 START-like domain superfamily Atu3010 c9a8d704f5cc1e7d463a29f51fd86fdb 307 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 32 162 5.0E-8 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Atu3010 c9a8d704f5cc1e7d463a29f51fd86fdb 307 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 173 303 6.8E-20 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Atu3010 c9a8d704f5cc1e7d463a29f51fd86fdb 307 Gene3D G3DSA:3.30.530.20 163 306 4.3E-34 T 14-10-2018 IPR023393 START-like domain superfamily Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 SUPERFAMILY SSF53335 118 315 8.79E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 5.8E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 5.8E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 5.8E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 5.8E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 Gene3D G3DSA:1.10.10.10 4 116 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 Pfam PF08241 Methyltransferase domain 157 253 1.6E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 SUPERFAMILY SSF46785 6 84 4.55E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 Pfam PF01022 Bacterial regulatory protein, arsR family 18 62 2.3E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 Gene3D G3DSA:3.40.50.150 138 322 2.3E-38 T 14-10-2018 Atu2124 c92634ecd06ec8646b7ad5bcc1472e1f 337 SMART SM00418 10 93 3.8E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 Gene3D G3DSA:2.40.110.10 129 241 2.1E-42 T 14-10-2018 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 PIRSF PIRSF016578 14 101 0.0019 T 14-10-2018 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 PIRSF PIRSF016578 136 389 4.4E-16 T 14-10-2018 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 385 4.7E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 SUPERFAMILY SSF47203 236 388 1.48E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 Gene3D G3DSA:1.20.140.10 242 387 3.1E-47 T 14-10-2018 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 Gene3D G3DSA:1.10.540.10 4 128 3.1E-46 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 SUPERFAMILY SSF56645 8 250 1.01E-83 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 225 1.6E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu3477 2efa7da88dd0c18cf52abc35addeec3b 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 126 1.6E-37 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu2595 755738fb76ca43d88983b769e8b05e1d 477 Pfam PF07171 MlrC C-terminus 289 452 2.0E-49 T 14-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal Atu2595 755738fb76ca43d88983b769e8b05e1d 477 Pfam PF07364 Metallopeptidase family M81 2 279 1.3E-103 T 14-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal Atu2595 755738fb76ca43d88983b769e8b05e1d 477 PIRSF PIRSF012702 1 472 6.0E-156 T 14-10-2018 IPR009197 Microcystin LR degradation protein MlrC Atu3767 c4e1c990d855199fcc8870ad90cd6293 302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 296 1.6E-35 T 14-10-2018 IPR000160 GGDEF domain Atu3767 c4e1c990d855199fcc8870ad90cd6293 302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 298 4.9E-36 T 14-10-2018 IPR000160 GGDEF domain Atu3767 c4e1c990d855199fcc8870ad90cd6293 302 SMART SM00267 127 300 4.4E-38 T 14-10-2018 IPR000160 GGDEF domain Atu3767 c4e1c990d855199fcc8870ad90cd6293 302 Gene3D G3DSA:3.30.70.270 125 299 5.9E-42 T 14-10-2018 Atu3767 c4e1c990d855199fcc8870ad90cd6293 302 SUPERFAMILY SSF55073 144 298 8.63E-36 T 14-10-2018 IPR029787 Nucleotide cyclase Atu6015 ddf1b0f0fcc8615d7d242c468f438174 413 SUPERFAMILY SSF48179 213 400 1.56E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu6015 ddf1b0f0fcc8615d7d242c468f438174 413 SUPERFAMILY SSF51735 22 140 2.6E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu6015 ddf1b0f0fcc8615d7d242c468f438174 413 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 218 374 1.4E-26 T 14-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Atu6015 ddf1b0f0fcc8615d7d242c468f438174 413 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 24 143 7.7E-8 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu6015 ddf1b0f0fcc8615d7d242c468f438174 413 Gene3D G3DSA:3.40.50.720 22 203 3.6E-18 T 14-10-2018 Atu6015 ddf1b0f0fcc8615d7d242c468f438174 413 Gene3D G3DSA:1.10.1040.10 250 379 7.2E-17 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu8094 77bbf0009ee321609850c21ad6ebc29c 81 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 11 56 3.0E-22 T 14-10-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Atu8094 77bbf0009ee321609850c21ad6ebc29c 81 Gene3D G3DSA:1.20.5.160 10 55 2.0E-5 T 14-10-2018 IPR036596 Bacterial aa3 type cytochrome c oxidase subunit IV superfamily KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Atu8094 77bbf0009ee321609850c21ad6ebc29c 81 SUPERFAMILY SSF81469 18 56 1.27E-11 T 14-10-2018 IPR036596 Bacterial aa3 type cytochrome c oxidase subunit IV superfamily KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Atu3414 ca002af71540ef9e2e50079d464e0e8c 441 SUPERFAMILY SSF51905 18 430 1.26E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3414 ca002af71540ef9e2e50079d464e0e8c 441 Gene3D G3DSA:3.50.50.60 376 418 5.1E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3414 ca002af71540ef9e2e50079d464e0e8c 441 Gene3D G3DSA:3.30.9.10 333 375 5.1E-23 T 14-10-2018 Atu3414 ca002af71540ef9e2e50079d464e0e8c 441 Gene3D G3DSA:3.50.50.60 19 233 8.7E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3414 ca002af71540ef9e2e50079d464e0e8c 441 Gene3D G3DSA:3.30.9.10 98 276 8.7E-59 T 14-10-2018 Atu3414 ca002af71540ef9e2e50079d464e0e8c 441 Pfam PF01266 FAD dependent oxidoreductase 19 412 6.1E-69 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu8039 0fcbf7c06e81986b05f0ae54c8e35026 121 Pfam PF03992 Antibiotic biosynthesis monooxygenase 23 74 2.3E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu8039 0fcbf7c06e81986b05f0ae54c8e35026 121 SUPERFAMILY SSF54909 15 111 8.5E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu8039 0fcbf7c06e81986b05f0ae54c8e35026 121 Gene3D G3DSA:3.30.70.100 15 116 4.7E-11 T 14-10-2018 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 Gene3D G3DSA:3.40.50.720 3 370 9.0E-147 T 14-10-2018 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 SMART SM01002 148 316 2.9E-76 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 373 1.8E-71 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 523 5.0E-206 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 SUPERFAMILY SSF52283 2 170 5.36E-53 T 14-10-2018 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 139 7.5E-48 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 SMART SM01003 4 139 1.5E-70 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 PIRSF PIRSF000203 1 523 3.0E-227 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 441 523 3.4E-33 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 Gene3D G3DSA:3.40.50.720 139 323 9.0E-147 T 14-10-2018 Atu2493 df7e1c7f64fd314d6e937fc5841732e9 524 SUPERFAMILY SSF51735 139 321 3.4E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2518 472c9f07b632db08af8a4a0f3d7426ec 531 Gene3D G3DSA:3.10.105.10 288 506 3.3E-102 T 14-10-2018 Atu2518 472c9f07b632db08af8a4a0f3d7426ec 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 443 6.4E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu2518 472c9f07b632db08af8a4a0f3d7426ec 531 PIRSF PIRSF002741 10 530 6.2E-76 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu2518 472c9f07b632db08af8a4a0f3d7426ec 531 Gene3D G3DSA:3.40.190.10 210 516 3.3E-102 T 14-10-2018 Atu2518 472c9f07b632db08af8a4a0f3d7426ec 531 SUPERFAMILY SSF53850 27 521 5.79E-100 T 14-10-2018 Atu2518 472c9f07b632db08af8a4a0f3d7426ec 531 Gene3D G3DSA:3.90.76.10 44 209 3.3E-102 T 14-10-2018 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 Gene3D G3DSA:3.40.50.2300 157 334 7.2E-55 T 14-10-2018 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 Gene3D G3DSA:1.10.260.40 2 56 1.2E-9 T 14-10-2018 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 SMART SM00354 6 68 2.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 SUPERFAMILY SSF53822 55 318 2.36E-45 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3162 f393716ca5e5f32b665d0d7cca413620 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 45 2.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 Pfam PF13377 Periplasmic binding protein-like domain 182 336 3.7E-20 T 14-10-2018 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 SUPERFAMILY SSF47413 2 56 1.09E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3162 f393716ca5e5f32b665d0d7cca413620 337 Gene3D G3DSA:3.40.50.2300 59 329 7.2E-55 T 14-10-2018 Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 Gene3D G3DSA:2.40.50.140 277 338 2.2E-5 T 14-10-2018 Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 SMART SM00382 26 218 9.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 SUPERFAMILY SSF52540 1 242 3.14E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 Gene3D G3DSA:3.40.50.300 1 235 2.1E-54 T 14-10-2018 Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 Gene3D G3DSA:2.40.50.100 339 348 2.2E-5 T 14-10-2018 Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 Pfam PF00005 ABC transporter 20 159 1.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3896 cfe042810d11af9a5e1f0c8992654ecf 356 SUPERFAMILY SSF50331 235 352 2.04E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3528 219f95c20ef6a5f881fec48943a5236e 329 Gene3D G3DSA:3.20.20.100 1 317 9.2E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3528 219f95c20ef6a5f881fec48943a5236e 329 Pfam PF00248 Aldo/keto reductase family 15 316 7.0E-43 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu3528 219f95c20ef6a5f881fec48943a5236e 329 SUPERFAMILY SSF51430 1 326 2.23E-62 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu0686 2a2f192044616c68e25da222d8a9dacf 967 SUPERFAMILY SSF50677 212 437 1.47E-38 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 Gene3D G3DSA:1.10.730.20 679 964 4.5E-76 T 14-10-2018 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 Pfam PF08264 Anticodon-binding domain of tRNA 723 871 1.3E-24 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 64 75 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 SUPERFAMILY SSF52374 8 685 4.86E-130 T 14-10-2018 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 679 3.2E-177 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 8 961 19.393 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 21 872 1.9E-241 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 SUPERFAMILY SSF47323 691 962 1.01E-59 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 600 609 6.6E-22 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 579 6.6E-22 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 57 68 6.6E-22 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 6.6E-22 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Atu0686 2a2f192044616c68e25da222d8a9dacf 967 Gene3D G3DSA:3.40.50.620 31 668 2.4E-218 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0686 2a2f192044616c68e25da222d8a9dacf 967 Gene3D G3DSA:3.90.740.10 204 442 2.4E-218 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atu0846 69d5958103451bedc6b82dee29663bb9 152 Pfam PF01047 MarR family 44 102 2.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0846 69d5958103451bedc6b82dee29663bb9 152 SUPERFAMILY SSF46785 13 149 9.23E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0846 69d5958103451bedc6b82dee29663bb9 152 SMART SM00347 37 137 1.2E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0846 69d5958103451bedc6b82dee29663bb9 152 Gene3D G3DSA:1.10.10.10 8 150 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0140 928e08ae7bbdfafeec2054dd75de1f68 208 SUPERFAMILY SSF81452 15 206 7.72E-59 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0140 928e08ae7bbdfafeec2054dd75de1f68 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 30 208 6.0E-81 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 Atu0140 928e08ae7bbdfafeec2054dd75de1f68 208 Pfam PF00510 Cytochrome c oxidase subunit III 26 206 7.8E-15 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0140 928e08ae7bbdfafeec2054dd75de1f68 208 Gene3D G3DSA:1.20.120.80 23 208 1.3E-55 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 SMART SM00382 28 211 6.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 Gene3D G3DSA:2.40.50.940 222 349 6.4E-32 T 14-10-2018 Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 Pfam PF00005 ABC transporter 20 161 9.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 SUPERFAMILY SSF50331 236 356 4.37E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 SUPERFAMILY SSF52540 4 242 1.77E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 Gene3D G3DSA:3.40.50.300 3 221 2.9E-64 T 14-10-2018 Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 Gene3D G3DSA:2.40.50.140 286 340 6.4E-32 T 14-10-2018 Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3970 c1404ac26d46ce04eb5008fe78ee4f0a 359 Pfam PF08402 TOBE domain 279 348 1.4E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 Gene3D G3DSA:1.10.10.10 4 144 5.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 SMART SM00347 32 130 5.2E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 Pfam PF01047 MarR family 39 97 7.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 5.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 5.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 5.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5211 1b79447516fcc9349ccc7d05dfb790d5 155 SUPERFAMILY SSF46785 6 145 1.06E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4170 e44c3baaa009942ab20a7bc1a68fd587 412 SUPERFAMILY SSF51735 2 161 6.33E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4170 e44c3baaa009942ab20a7bc1a68fd587 412 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 150 396 5.1E-22 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Atu4170 e44c3baaa009942ab20a7bc1a68fd587 412 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 146 7.2E-34 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Atu4170 e44c3baaa009942ab20a7bc1a68fd587 412 Gene3D G3DSA:3.30.360.10 160 356 8.7E-137 T 14-10-2018 Atu4170 e44c3baaa009942ab20a7bc1a68fd587 412 Gene3D G3DSA:3.40.50.720 6 398 8.7E-137 T 14-10-2018 Atu2283 d5c1f515c2aebce17071474d044da90d 150 SUPERFAMILY SSF49503 27 143 3.95E-27 T 14-10-2018 IPR008972 Cupredoxin Atu2283 d5c1f515c2aebce17071474d044da90d 150 Gene3D G3DSA:2.60.40.420 25 149 9.9E-34 T 14-10-2018 IPR008972 Cupredoxin Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00156 Type I copper blue protein family signature 63 78 2.4E-12 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00156 Type I copper blue protein family signature 49 62 2.4E-12 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00156 Type I copper blue protein family signature 95 109 2.4E-12 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 TIGRFAM TIGR02375 pseudoazurin: pseudoazurin 31 147 4.0E-48 T 14-10-2018 IPR012745 Pseudoazurin GO:0005507 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00155 Amicyanin family signature 63 78 3.2E-30 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00155 Amicyanin family signature 84 99 3.2E-30 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00155 Amicyanin family signature 100 115 3.2E-30 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00155 Amicyanin family signature 26 41 3.2E-30 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 PRINTS PR00155 Amicyanin family signature 43 62 3.2E-30 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu2283 d5c1f515c2aebce17071474d044da90d 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 30 117 9.5E-16 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 493 2.8E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 PRINTS PR00154 AMP-binding signature 160 168 5.1E-5 T 14-10-2018 IPR020459 AMP-binding Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 PRINTS PR00154 AMP-binding signature 148 159 5.1E-5 T 14-10-2018 IPR020459 AMP-binding Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 Pfam PF00501 AMP-binding enzyme 15 410 6.4E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 Gene3D G3DSA:3.40.50.12780 4 403 4.3E-103 T 14-10-2018 Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 SUPERFAMILY SSF56801 8 502 6.8E-132 T 14-10-2018 Atu1672 c739b1d8612a6ec0d8ec5b741ddb60e1 510 Gene3D G3DSA:3.30.300.30 405 509 7.3E-23 T 14-10-2018 Atu1800 a5be9dbd86ce94ba7a58b5eb9dc8bfe5 384 Gene3D G3DSA:3.30.1380.10 276 378 2.0E-7 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu1800 a5be9dbd86ce94ba7a58b5eb9dc8bfe5 384 Pfam PF08291 Peptidase M15 271 366 7.7E-15 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Atu1800 a5be9dbd86ce94ba7a58b5eb9dc8bfe5 384 SUPERFAMILY SSF55166 265 380 1.14E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu4259 81c8afcafff2c2e1b702998c84663b70 531 Gene3D G3DSA:3.40.190.10 29 514 1.9E-168 T 14-10-2018 Atu4259 81c8afcafff2c2e1b702998c84663b70 531 Gene3D G3DSA:3.10.105.10 283 502 1.9E-168 T 14-10-2018 Atu4259 81c8afcafff2c2e1b702998c84663b70 531 PIRSF PIRSF002741 19 527 7.7E-113 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4259 81c8afcafff2c2e1b702998c84663b70 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 450 8.0E-89 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4259 81c8afcafff2c2e1b702998c84663b70 531 Gene3D G3DSA:3.90.76.10 59 181 1.9E-168 T 14-10-2018 Atu4259 81c8afcafff2c2e1b702998c84663b70 531 SUPERFAMILY SSF53850 21 520 3.26E-139 T 14-10-2018 Atu1886 1f5c53473ccda49bb6df4878b27c4cf2 208 SMART SM00986 38 201 7.2E-32 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu1886 1f5c53473ccda49bb6df4878b27c4cf2 208 Gene3D G3DSA:3.40.470.10 6 208 1.3E-66 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu1886 1f5c53473ccda49bb6df4878b27c4cf2 208 Pfam PF03167 Uracil DNA glycosylase superfamily 42 197 5.2E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu1886 1f5c53473ccda49bb6df4878b27c4cf2 208 SUPERFAMILY SSF52141 6 204 2.98E-55 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu1886 1f5c53473ccda49bb6df4878b27c4cf2 208 SMART SM00987 38 201 7.2E-32 T 14-10-2018 Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 SMART SM00851 18 112 1.3E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 ProSitePatterns PS01335 Methylglyoxal synthase active site. 59 67 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 Gene3D G3DSA:3.40.50.1380 1 127 4.6E-55 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 Pfam PF02142 MGS-like domain 19 111 1.5E-20 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 SUPERFAMILY SSF52335 2 122 8.24E-49 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 PIRSF PIRSF006614 1 127 8.9E-57 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 6 122 3.0E-48 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Atu0185 6d29ce3e91ddc2571b1b3a3383e3cdd5 127 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 5 125 30.887 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Atu4345 4ffbf0c5627aac2289680758068a00a1 158 SUPERFAMILY SSF141452 1 156 2.75E-38 T 14-10-2018 IPR036624 Hcp1-like superfamily Atu4345 4ffbf0c5627aac2289680758068a00a1 158 Gene3D G3DSA:2.30.110.20 1 157 4.4E-42 T 14-10-2018 IPR036624 Hcp1-like superfamily Atu4345 4ffbf0c5627aac2289680758068a00a1 158 Pfam PF05638 Type VI secretion system effector, Hcp 4 133 4.1E-33 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 Gene3D G3DSA:1.10.260.40 1 58 1.2E-18 T 14-10-2018 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 SUPERFAMILY SSF47413 2 57 1.01E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 47 2.9E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 SMART SM00354 1 70 7.3E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 Gene3D G3DSA:3.40.50.2300 163 295 1.5E-64 T 14-10-2018 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 Pfam PF13377 Periplasmic binding protein-like domain 172 335 4.6E-25 T 14-10-2018 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 Gene3D G3DSA:3.40.50.2300 77 314 1.5E-64 T 14-10-2018 Atu0590 23175255938c89a79c5c1c2a1f492ffb 341 SUPERFAMILY SSF53822 71 339 2.16E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4786 79776bad890872711b05c1e932afa4fa 353 SUPERFAMILY SSF52540 9 249 5.84E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4786 79776bad890872711b05c1e932afa4fa 353 Gene3D G3DSA:2.40.50.940 227 350 1.1E-8 T 14-10-2018 Atu4786 79776bad890872711b05c1e932afa4fa 353 Gene3D G3DSA:2.40.50.140 287 343 1.1E-8 T 14-10-2018 Atu4786 79776bad890872711b05c1e932afa4fa 353 Pfam PF00005 ABC transporter 26 166 7.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4786 79776bad890872711b05c1e932afa4fa 353 Gene3D G3DSA:3.40.50.300 8 226 2.7E-67 T 14-10-2018 Atu4786 79776bad890872711b05c1e932afa4fa 353 SUPERFAMILY SSF50331 242 352 4.08E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4786 79776bad890872711b05c1e932afa4fa 353 SMART SM00382 33 216 4.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4786 79776bad890872711b05c1e932afa4fa 353 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4786 79776bad890872711b05c1e932afa4fa 353 Pfam PF08402 TOBE domain 280 344 5.8E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu1980 baf927b5a4998c8718dd41b80fc4ee39 125 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 28 123 1.8E-13 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 Atu2601 ec2ed53a4662d3121e98e87083bf2ba1 410 Pfam PF13416 Bacterial extracellular solute-binding protein 48 353 4.0E-40 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu2601 ec2ed53a4662d3121e98e87083bf2ba1 410 Gene3D G3DSA:3.40.190.10 26 409 1.2E-75 T 14-10-2018 Atu2601 ec2ed53a4662d3121e98e87083bf2ba1 410 SUPERFAMILY SSF53850 35 406 5.69E-77 T 14-10-2018 Atu3712 4a1ce8c645808eaf8c7a9df0e20af79e 329 Gene3D G3DSA:1.25.40.10 206 325 1.3E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3712 4a1ce8c645808eaf8c7a9df0e20af79e 329 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 205 320 6.8E-41 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Atu3712 4a1ce8c645808eaf8c7a9df0e20af79e 329 Pfam PF13525 Outer membrane lipoprotein 205 296 2.5E-7 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Atu3712 4a1ce8c645808eaf8c7a9df0e20af79e 329 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 325 16.348 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Atu3712 4a1ce8c645808eaf8c7a9df0e20af79e 329 SUPERFAMILY SSF48452 195 314 9.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2564 c80fa83d1e7b1676a04de1182af1eebc 131 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 87 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2564 c80fa83d1e7b1676a04de1182af1eebc 131 SUPERFAMILY SSF46785 8 108 1.9E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2564 c80fa83d1e7b1676a04de1182af1eebc 131 Gene3D G3DSA:1.10.10.10 1 131 1.1E-50 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2081 e5a181cde64ed9b1891b6d636f841c49 297 Gene3D G3DSA:3.90.1200.10 105 292 4.3E-21 T 14-10-2018 Atu2081 e5a181cde64ed9b1891b6d636f841c49 297 SUPERFAMILY SSF56112 15 266 8.26E-51 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu2081 e5a181cde64ed9b1891b6d636f841c49 297 Gene3D G3DSA:3.30.200.20 9 100 3.9E-13 T 14-10-2018 Atu2081 e5a181cde64ed9b1891b6d636f841c49 297 Pfam PF01636 Phosphotransferase enzyme family 34 256 1.3E-35 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 SUPERFAMILY SSF52172 1 118 2.7E-38 T 14-10-2018 IPR011006 CheY-like superfamily Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 SMART SM00862 145 216 1.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 SUPERFAMILY SSF46894 119 217 1.3E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.3E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 Gene3D G3DSA:3.40.50.2300 1 121 5.2E-42 T 14-10-2018 Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 Gene3D G3DSA:1.10.10.10 122 221 6.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 SMART SM00448 1 112 2.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0970 89c8b23e840612aeab41a5e2e284ac56 223 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 SUPERFAMILY SSF81340 19 448 1.44E-81 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 Gene3D G3DSA:1.10.3080.10 32 439 7.4E-62 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 PRINTS PR00762 Chloride channel signature 341 361 5.8E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 PRINTS PR00762 Chloride channel signature 35 54 5.8E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 PRINTS PR00762 Chloride channel signature 375 391 5.8E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 PRINTS PR00762 Chloride channel signature 393 412 5.8E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 Pfam PF00654 Voltage gated chloride channel 85 425 2.9E-59 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu1493 db0bf0ba14ea7c98299456eb5ce6dd6b 593 SUPERFAMILY SSF54631 455 581 2.89E-6 T 14-10-2018 Atu3311 2ef156e6ce426485b01d6fb77e43d095 394 SUPERFAMILY SSF48208 16 390 4.82E-87 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu3311 2ef156e6ce426485b01d6fb77e43d095 394 Gene3D G3DSA:1.50.10.10 13 393 4.6E-71 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu3311 2ef156e6ce426485b01d6fb77e43d095 394 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 42 382 4.1E-109 T 14-10-2018 Atu3556 2583961357f8296e66b310f1af436e11 749 Pfam PF13614 AAA domain 561 678 6.6E-11 T 14-10-2018 IPR025669 AAA domain Atu3556 2583961357f8296e66b310f1af436e11 749 Pfam PF13807 G-rich domain on putative tyrosine kinase 387 466 1.8E-12 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain Atu3556 2583961357f8296e66b310f1af436e11 749 Gene3D G3DSA:3.40.50.300 461 747 7.9E-60 T 14-10-2018 Atu3556 2583961357f8296e66b310f1af436e11 749 Pfam PF02706 Chain length determinant protein 13 103 1.3E-7 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Atu3556 2583961357f8296e66b310f1af436e11 749 SUPERFAMILY SSF52540 548 727 3.13E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3556 2583961357f8296e66b310f1af436e11 749 TIGRFAM TIGR01005 eps_transp_fam: exopolysaccharide transport protein family 13 747 2.7E-145 T 14-10-2018 IPR005700 Exopolysaccharide biosynthesis protein ExoP-like GO:0045226 Atu3556 2583961357f8296e66b310f1af436e11 749 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 548 734 7.9E-37 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Atu4299 84d582ed84fa78cab38203239a707aba 179 Gene3D G3DSA:1.10.10.10 2 148 1.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4299 84d582ed84fa78cab38203239a707aba 179 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 141 6.7E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu4299 84d582ed84fa78cab38203239a707aba 179 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atu4299 84d582ed84fa78cab38203239a707aba 179 SUPERFAMILY SSF46785 4 145 2.7E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4299 84d582ed84fa78cab38203239a707aba 179 Pfam PF02082 Transcriptional regulator 4 83 4.9E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu1830 22df32122dc5e2f306e6e06d236704e1 155 Gene3D G3DSA:3.40.30.10 2 154 3.0E-47 T 14-10-2018 Atu1830 22df32122dc5e2f306e6e06d236704e1 155 Pfam PF00578 AhpC/TSA family 6 134 3.5E-37 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atu1830 22df32122dc5e2f306e6e06d236704e1 155 PIRSF PIRSF000239 1 151 1.8E-21 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atu1830 22df32122dc5e2f306e6e06d236704e1 155 SUPERFAMILY SSF52833 4 155 1.64E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu4410 e85f46af9c86687b010cd5b77e8714e0 233 PIRSF PIRSF000013 1 204 4.0E-110 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Atu4410 e85f46af9c86687b010cd5b77e8714e0 233 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 12 195 1.3E-95 T 14-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 Atu4410 e85f46af9c86687b010cd5b77e8714e0 233 SUPERFAMILY SSF48695 18 197 4.31E-62 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily Atu4410 e85f46af9c86687b010cd5b77e8714e0 233 Gene3D G3DSA:1.10.3820.10 21 197 2.4E-36 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Atu4410 e85f46af9c86687b010cd5b77e8714e0 233 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 23 194 3.8E-74 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Atu3423 64b89b89d734d1e2ec0d0166b36cb411 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 3.5E-32 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu3423 64b89b89d734d1e2ec0d0166b36cb411 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atu3423 64b89b89d734d1e2ec0d0166b36cb411 149 Pfam PF02082 Transcriptional regulator 1 81 1.6E-23 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu3423 64b89b89d734d1e2ec0d0166b36cb411 149 Gene3D G3DSA:1.10.10.10 1 145 8.0E-42 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3423 64b89b89d734d1e2ec0d0166b36cb411 149 SUPERFAMILY SSF46785 1 136 4.08E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 48 54 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 Gene3D G3DSA:3.40.50.150 25 274 1.1E-70 T 14-10-2018 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 SUPERFAMILY SSF53335 23 271 5.39E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 Pfam PF01555 DNA methylase 45 266 1.4E-58 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 251 271 4.1E-41 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 209 226 4.1E-41 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 228 246 4.1E-41 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 93 113 4.1E-41 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atu0794 b82aaba7563a5ee3a1201cbe16fa5047 381 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 44 58 4.1E-41 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 Pfam PF06481 COX Aromatic Rich Motif 218 263 2.4E-17 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 Gene3D G3DSA:2.60.40.420 84 260 8.9E-47 T 14-10-2018 IPR008972 Cupredoxin Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 PIRSF PIRSF000292 1 289 5.7E-117 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 132 199 2.8E-5 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 Gene3D G3DSA:1.10.287.90 1 83 7.5E-31 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 SUPERFAMILY SSF81464 2 88 1.8E-21 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 1 218 3.9E-110 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Atu0142 e85d2c354dc94c57b11fc8ab32cf494c 332 SUPERFAMILY SSF49503 104 260 2.03E-45 T 14-10-2018 IPR008972 Cupredoxin Atu0163 e7884549829e649ffe54163d39f46c7a 307 SUPERFAMILY SSF74653 224 306 2.49E-12 T 14-10-2018 Atu0163 e7884549829e649ffe54163d39f46c7a 307 Gene3D G3DSA:3.30.1150.10 186 304 1.3E-13 T 14-10-2018 Atu0163 e7884549829e649ffe54163d39f46c7a 307 Pfam PF13103 TonB C terminal 225 298 1.0E-10 T 14-10-2018 Atu0163 e7884549829e649ffe54163d39f46c7a 307 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 239 307 6.5E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal Atu0850 c32c1763e73813fafd5e4afeefefa442 453 SMART SM00382 271 447 1.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0850 c32c1763e73813fafd5e4afeefefa442 453 SUPERFAMILY SSF52540 12 145 1.2E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0850 c32c1763e73813fafd5e4afeefefa442 453 Pfam PF00005 ABC transporter 269 394 2.8E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0850 c32c1763e73813fafd5e4afeefefa442 453 Gene3D G3DSA:3.40.50.300 244 452 6.0E-35 T 14-10-2018 Atu0850 c32c1763e73813fafd5e4afeefefa442 453 SUPERFAMILY SSF52540 241 451 5.68E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0850 c32c1763e73813fafd5e4afeefefa442 453 Gene3D G3DSA:3.40.50.300 1 195 1.8E-27 T 14-10-2018 Atu0850 c32c1763e73813fafd5e4afeefefa442 453 Pfam PF00005 ABC transporter 18 101 1.4E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:2.40.270.10 1027 1263 6.7E-83 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF04565 RNA polymerase Rpb2, domain 3 523 591 9.2E-32 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF10385 RNA polymerase beta subunit external 1 domain 601 666 1.1E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF04560 RNA polymerase Rpb2, domain 7 1287 1361 2.0E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:3.90.1110.10 330 451 6.9E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:2.40.270.10 802 841 6.3E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF04563 RNA polymerase beta subunit 29 507 7.8E-34 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:3.90.1100.10 20 178 5.2E-56 T 14-10-2018 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:3.90.1100.10 654 723 3.6E-20 T 14-10-2018 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:2.40.50.100 724 801 2.0E-30 T 14-10-2018 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 SUPERFAMILY SSF64484 13 1364 0.0 T 14-10-2018 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1085 1097 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:2.40.50.150 842 963 1.0E-45 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:3.90.1800.10 1273 1328 9.2E-11 T 14-10-2018 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1363 12.4 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 12 1360 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF04561 RNA polymerase Rpb2, domain 2 179 231 3.3E-5 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF04561 RNA polymerase Rpb2, domain 2 357 464 1.9E-19 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Pfam PF00562 RNA polymerase Rpb2, domain 6 728 1285 7.9E-166 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1956 e0bc6cb657f770fa666809e34fb1d905 1378 Gene3D G3DSA:3.90.1100.10 452 634 1.5E-70 T 14-10-2018 Atu5476 dd1186b6f16b88c12f0752f49107adab 407 Gene3D G3DSA:3.40.50.880 157 405 9.9E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5476 dd1186b6f16b88c12f0752f49107adab 407 SUPERFAMILY SSF52317 162 403 2.07E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5476 dd1186b6f16b88c12f0752f49107adab 407 Pfam PF00117 Glutamine amidotransferase class-I 174 397 7.2E-24 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 SMART SM01008 2 110 1.5E-46 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 SUPERFAMILY SSF56003 110 746 3.4E-205 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 132 676 1.4E-196 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 2 110 7.7E-27 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Gene3D G3DSA:3.30.365.10 124 380 1.3E-278 T 14-10-2018 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 SUPERFAMILY SSF54665 1 110 5.89E-34 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 1 748 0.0 T 14-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Gene3D G3DSA:3.30.365.10 432 578 1.3E-278 T 14-10-2018 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Gene3D G3DSA:3.30.365.10 111 743 1.3E-278 T 14-10-2018 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Gene3D G3DSA:3.90.1170.50 1 110 1.3E-278 T 14-10-2018 Atu2310 db5c3b384bd154c3343f397ea144c9c3 750 Gene3D G3DSA:3.30.365.10 159 253 1.3E-278 T 14-10-2018 Atu3538 1d931b5bb2df0bec5c934ff70beb61f5 171 SUPERFAMILY SSF158442 18 164 2.09E-32 T 14-10-2018 IPR023380 DsbB-like superfamily Atu3538 1d931b5bb2df0bec5c934ff70beb61f5 171 PIRSF PIRSF033913 1 171 4.9E-83 T 14-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like Atu3538 1d931b5bb2df0bec5c934ff70beb61f5 171 Pfam PF02600 Disulfide bond formation protein DsbB 14 164 1.3E-29 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Atu3538 1d931b5bb2df0bec5c934ff70beb61f5 171 Gene3D G3DSA:1.20.1550.10 2 170 1.3E-14 T 14-10-2018 IPR023380 DsbB-like superfamily Atu3690 4afc3d5144ecafa65cefe7b60cf890c7 324 SUPERFAMILY SSF81345 4 318 2.35E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu3690 4afc3d5144ecafa65cefe7b60cf890c7 324 Gene3D G3DSA:1.10.3470.10 1 324 2.0E-97 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu3690 4afc3d5144ecafa65cefe7b60cf890c7 324 Pfam PF01032 FecCD transport family 13 318 6.4E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu0043 d023ead26960a3b3201758df7a52e849 198 Gene3D G3DSA:3.30.230.40 92 198 1.3E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Atu0043 d023ead26960a3b3201758df7a52e849 198 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atu0043 d023ead26960a3b3201758df7a52e849 198 SUPERFAMILY SSF54211 90 180 6.37E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0043 d023ead26960a3b3201758df7a52e849 198 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 2.0E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atu0043 d023ead26960a3b3201758df7a52e849 198 Gene3D G3DSA:3.30.230.40 1 91 8.5E-38 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Atu0043 d023ead26960a3b3201758df7a52e849 198 SUPERFAMILY SSF54211 4 88 3.29E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0043 d023ead26960a3b3201758df7a52e849 198 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 42.832 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atu0043 d023ead26960a3b3201758df7a52e849 198 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Atu3594 407255c69a46ca0c2a6ebc51b39c6d7e 257 Gene3D G3DSA:1.20.1540.10 9 223 2.2E-28 T 14-10-2018 IPR035952 Rhomboid-like superfamily Atu3594 407255c69a46ca0c2a6ebc51b39c6d7e 257 SUPERFAMILY SSF144091 13 220 3.53E-44 T 14-10-2018 Atu3594 407255c69a46ca0c2a6ebc51b39c6d7e 257 Pfam PF01694 Rhomboid family 75 219 2.8E-37 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Atu4708 4d6b919140bc07591df5b6681148db81 960 SMART SM00926 249 303 5.3E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4708 4d6b919140bc07591df5b6681148db81 960 Gene3D G3DSA:3.10.20.740 19 140 7.2E-39 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 3.2E-23 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 SUPERFAMILY SSF53706 250 783 3.66E-191 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Pfam PF00384 Molybdopterin oxidoreductase 306 737 1.1E-72 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4708 4d6b919140bc07591df5b6681148db81 960 SMART SM00929 101 141 6.5E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4708 4d6b919140bc07591df5b6681148db81 960 Gene3D G3DSA:3.40.228.10 386 593 4.0E-170 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 4.8E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4708 4d6b919140bc07591df5b6681148db81 960 SUPERFAMILY SSF50692 787 930 8.14E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu4708 4d6b919140bc07591df5b6681148db81 960 Gene3D G3DSA:2.20.25.90 250 302 7.3E-16 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 254 929 6.6E-291 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 Atu4708 4d6b919140bc07591df5b6681148db81 960 Pfam PF12838 4Fe-4S dicluster domain 178 235 1.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu4708 4d6b919140bc07591df5b6681148db81 960 SUPERFAMILY SSF54292 19 92 9.26E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu4708 4d6b919140bc07591df5b6681148db81 960 Gene3D G3DSA:2.40.40.20 818 931 5.0E-33 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 222 233 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu4708 4d6b919140bc07591df5b6681148db81 960 SUPERFAMILY SSF54862 93 244 1.09E-38 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Pfam PF01568 Molydopterin dinucleotide binding domain 821 925 6.9E-27 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atu4708 4d6b919140bc07591df5b6681148db81 960 PIRSF PIRSF036643 15 959 0.0 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Gene3D G3DSA:3.40.50.740 311 780 4.0E-170 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Gene3D G3DSA:3.30.70.20 159 240 4.6E-24 T 14-10-2018 Atu4708 4d6b919140bc07591df5b6681148db81 960 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 251 301 1.3E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4708 4d6b919140bc07591df5b6681148db81 960 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 179 190 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu3465 b293514b7be710bddc1b8b2479e7f550 431 Gene3D G3DSA:3.60.15.10 142 426 5.4E-103 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu3465 b293514b7be710bddc1b8b2479e7f550 431 Gene3D G3DSA:3.90.190.10 1 141 1.1E-35 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu3465 b293514b7be710bddc1b8b2479e7f550 431 Pfam PF04273 Putative phosphatase (DUF442) 4 111 4.1E-42 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 Atu3465 b293514b7be710bddc1b8b2479e7f550 431 Pfam PF00753 Metallo-beta-lactamase superfamily 160 345 3.0E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3465 b293514b7be710bddc1b8b2479e7f550 431 SUPERFAMILY SSF56281 151 426 1.15E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu3465 b293514b7be710bddc1b8b2479e7f550 431 SUPERFAMILY SSF52799 5 98 8.39E-8 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu3465 b293514b7be710bddc1b8b2479e7f550 431 SMART SM00849 156 345 1.1E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3465 b293514b7be710bddc1b8b2479e7f550 431 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 6 132 3.7E-28 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 SMART SM00304 207 260 1.9E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 SUPERFAMILY SSF158472 207 254 2.09E-7 T 14-10-2018 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 SMART SM00267 417 586 4.3E-53 T 14-10-2018 IPR000160 GGDEF domain Atu3061 c5abeac717f73729847adaba2c1bd61c 589 SMART SM00065 287 425 0.0063 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 Gene3D G3DSA:1.20.1480.50 174 263 3.6E-11 T 14-10-2018 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 582 7.0E-42 T 14-10-2018 IPR000160 GGDEF domain Atu3061 c5abeac717f73729847adaba2c1bd61c 589 Gene3D G3DSA:3.30.70.270 424 588 2.3E-52 T 14-10-2018 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 584 1.3E-43 T 14-10-2018 IPR000160 GGDEF domain Atu3061 c5abeac717f73729847adaba2c1bd61c 589 SUPERFAMILY SSF55781 266 423 1.2E-10 T 14-10-2018 Atu3061 c5abeac717f73729847adaba2c1bd61c 589 SUPERFAMILY SSF55073 433 585 2.88E-44 T 14-10-2018 IPR029787 Nucleotide cyclase Atu3061 c5abeac717f73729847adaba2c1bd61c 589 Gene3D G3DSA:3.30.450.40 264 423 5.4E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Gene3D G3DSA:3.30.70.370 730 994 4.0E-105 T 14-10-2018 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 176 2.3E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SUPERFAMILY SSF47807 177 291 3.29E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 809 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 721 743 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 911 927 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 820 845 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 890 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 941 954 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 744 759 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 766 789 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 PRINTS PR00868 DNA-polymerase family A (pol I) signature 857 868 9.3E-76 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SUPERFAMILY SSF53098 374 582 1.48E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Gene3D G3DSA:3.40.50.1010 7 284 6.6E-92 T 14-10-2018 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SMART SM00475 5 268 6.1E-122 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Gene3D G3DSA:1.20.1060.10 608 724 2.7E-39 T 14-10-2018 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SMART SM00482 752 958 5.4E-121 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Gene3D G3DSA:1.10.150.20 180 253 6.6E-92 T 14-10-2018 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SMART SM00479 397 584 5.2E-8 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Pfam PF01612 3'-5' exonuclease 377 582 3.8E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SMART SM00279 179 214 1.9E-15 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Gene3D G3DSA:1.10.150.20 775 918 4.0E-105 T 14-10-2018 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 ProSitePatterns PS00447 DNA polymerase family A signature. 820 839 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 TIGRFAM TIGR00593 pola: DNA polymerase I 7 998 7.4E-287 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SUPERFAMILY SSF56672 587 998 1.67E-149 T 14-10-2018 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SUPERFAMILY SSF88723 5 176 1.64E-52 T 14-10-2018 IPR029060 PIN-like domain superfamily Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Pfam PF00476 DNA polymerase family A 616 996 6.9E-148 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 270 2.6E-31 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 SMART SM00474 377 583 7.2E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Atu0110 f01fd844ce27b2831c4b68346dc57f5c 998 Gene3D G3DSA:3.30.420.10 374 606 1.0E-61 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 9.5E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 9.5E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 SMART SM00420 8 60 2.2E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 Pfam PF08220 DeoR-like helix-turn-helix domain 8 60 2.8E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 SMART SM01134 73 234 7.7E-43 T 14-10-2018 Atu5243 e45db3ab22692c34a0ee337d70909d44 253 SUPERFAMILY SSF46785 8 61 6.92E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5243 e45db3ab22692c34a0ee337d70909d44 253 Pfam PF00455 DeoR C terminal sensor domain 78 233 3.3E-40 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Atu5243 e45db3ab22692c34a0ee337d70909d44 253 SUPERFAMILY SSF100950 75 234 3.45E-25 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu5243 e45db3ab22692c34a0ee337d70909d44 253 Gene3D G3DSA:1.10.10.10 1 55 2.7E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1613 0b437c98dad5d41e59383f71708182c7 226 Gene3D G3DSA:3.30.70.260 117 194 6.1E-80 T 14-10-2018 Atu1613 0b437c98dad5d41e59383f71708182c7 226 SUPERFAMILY SSF75445 123 206 9.29E-21 T 14-10-2018 Atu1613 0b437c98dad5d41e59383f71708182c7 226 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 223 31.789 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Atu1613 0b437c98dad5d41e59383f71708182c7 226 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 2 220 2.4E-78 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Atu1613 0b437c98dad5d41e59383f71708182c7 226 SUPERFAMILY SSF100950 1 141 5.23E-40 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu1613 0b437c98dad5d41e59383f71708182c7 226 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 46 219 2.8E-61 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Atu1613 0b437c98dad5d41e59383f71708182c7 226 Gene3D G3DSA:3.40.50.1360 4 210 6.1E-80 T 14-10-2018 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 Gene3D G3DSA:3.40.50.1860 104 214 1.2E-75 T 14-10-2018 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 2.8E-51 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 Gene3D G3DSA:3.40.50.1860 4 223 1.2E-75 T 14-10-2018 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 SUPERFAMILY SSF53681 119 228 4.36E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 SUPERFAMILY SSF53681 1 116 3.71E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 231 2.2E-69 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Atu4081 b977a5f860416dd8f90d69d1bd93c473 237 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 Pfam PF13932 GidA associated domain 399 609 3.8E-71 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 Gene3D G3DSA:1.10.150.570 562 615 1.2E-21 T 14-10-2018 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 Pfam PF01134 Glucose inhibited division protein A 6 392 1.7E-161 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 Gene3D G3DSA:3.50.50.60 303 455 9.4E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 Gene3D G3DSA:3.50.50.60 1 220 4.1E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 614 2.3E-239 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 SMART SM01228 539 610 2.4E-36 T 14-10-2018 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 617 40.298 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Atu2831 d8c15147ba6b54779bbf020e84f0c6f8 627 SUPERFAMILY SSF51905 3 257 4.14E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4050 5a109b70294de05a39be462870412bfb 301 Pfam PF00483 Nucleotidyl transferase 9 269 1.7E-22 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atu4050 5a109b70294de05a39be462870412bfb 301 SUPERFAMILY SSF53448 8 279 2.03E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4050 5a109b70294de05a39be462870412bfb 301 Gene3D G3DSA:3.90.550.10 2 292 9.9E-76 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 Gene3D G3DSA:3.40.50.12740 922 1075 4.2E-27 T 14-10-2018 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 SUPERFAMILY SSF55874 732 896 3.14E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 Pfam PF00072 Response regulator receiver domain 924 1033 2.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 SMART SM00388 676 742 4.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 SUPERFAMILY SSF52172 920 1044 1.71E-29 T 14-10-2018 IPR011006 CheY-like superfamily Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 SMART SM00448 922 1033 7.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 Pfam PF00512 His Kinase A (phospho-acceptor) domain 677 742 2.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 SUPERFAMILY SSF47384 662 743 2.35E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 853 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 884 897 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 878 1.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 Gene3D G3DSA:3.30.565.10 743 903 7.8E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 Gene3D G3DSA:1.10.287.130 662 742 2.0E-23 T 14-10-2018 Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 789 898 2.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2418 0afa7898a0463781a1c2dfd7cbe8f9bd 1131 SMART SM00387 789 900 7.0E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4057 4643479595a68f22990d78725a71da85 492 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 327 468 1.7E-8 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Atu4057 4643479595a68f22990d78725a71da85 492 Pfam PF13440 Polysaccharide biosynthesis protein 34 323 9.0E-67 T 14-10-2018 Atu5343 3ab975d7dc1f6cc1b511af2b8c806881 517 PIRSF PIRSF002741 5 516 4.4E-72 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu5343 3ab975d7dc1f6cc1b511af2b8c806881 517 SUPERFAMILY SSF53850 31 509 1.99E-112 T 14-10-2018 Atu5343 3ab975d7dc1f6cc1b511af2b8c806881 517 Gene3D G3DSA:3.10.105.10 271 487 1.1E-93 T 14-10-2018 Atu5343 3ab975d7dc1f6cc1b511af2b8c806881 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 435 1.6E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu5343 3ab975d7dc1f6cc1b511af2b8c806881 517 Gene3D G3DSA:3.90.76.10 52 195 1.1E-93 T 14-10-2018 Atu5343 3ab975d7dc1f6cc1b511af2b8c806881 517 Gene3D G3DSA:3.40.190.10 196 494 1.1E-93 T 14-10-2018 Atu0134 83fc0b63cd0fbde3950b80795d954bb2 178 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 58 177 5.0E-47 T 14-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Atu0134 83fc0b63cd0fbde3950b80795d954bb2 178 SUPERFAMILY SSF50630 64 165 6.38E-18 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily Atu0134 83fc0b63cd0fbde3950b80795d954bb2 178 Pfam PF13975 gag-polyprotein putative aspartyl protease 72 163 9.5E-24 T 14-10-2018 Atu0134 83fc0b63cd0fbde3950b80795d954bb2 178 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 82 93 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Atu0134 83fc0b63cd0fbde3950b80795d954bb2 178 Gene3D G3DSA:2.40.70.10 53 177 2.3E-31 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily Atu3666 b139a03f8e6b651bc49ba59456f48f35 152 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atu3666 b139a03f8e6b651bc49ba59456f48f35 152 Pfam PF02082 Transcriptional regulator 1 81 7.2E-17 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu3666 b139a03f8e6b651bc49ba59456f48f35 152 SUPERFAMILY SSF46785 7 128 3.71E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3666 b139a03f8e6b651bc49ba59456f48f35 152 Gene3D G3DSA:1.10.10.10 1 137 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 Pfam PF00005 ABC transporter 21 162 1.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 Gene3D G3DSA:2.40.50.140 290 348 1.9E-26 T 14-10-2018 Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 Pfam PF08402 TOBE domain 283 356 6.4E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 SUPERFAMILY SSF50331 243 363 1.34E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 Gene3D G3DSA:2.40.50.940 228 357 1.9E-26 T 14-10-2018 Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 SMART SM00382 29 217 4.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 SUPERFAMILY SSF52540 4 250 1.33E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3131 1e6d0f672dd7b27bb3a430493cb67ad7 366 Gene3D G3DSA:3.40.50.300 3 227 1.2E-60 T 14-10-2018 Atu4394 afe3c117a8e73db0ea8f0b3f9914d926 518 Gene3D G3DSA:1.20.5.570 482 517 1.2E-9 T 14-10-2018 Atu4394 afe3c117a8e73db0ea8f0b3f9914d926 518 SUPERFAMILY SSF50475 28 349 1.33E-111 T 14-10-2018 Atu4394 afe3c117a8e73db0ea8f0b3f9914d926 518 SUPERFAMILY SSF143968 350 514 1.7E-62 T 14-10-2018 Atu4394 afe3c117a8e73db0ea8f0b3f9914d926 518 Gene3D G3DSA:3.40.1670.10 364 481 7.1E-45 T 14-10-2018 Atu4394 afe3c117a8e73db0ea8f0b3f9914d926 518 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 30 482 3.1E-147 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Atu4394 afe3c117a8e73db0ea8f0b3f9914d926 518 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 34 458 5.4E-157 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Atu2094 fa483af607500b2642cfb03c693b512d 378 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 2.3E-32 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2094 fa483af607500b2642cfb03c693b512d 378 Gene3D G3DSA:3.40.50.2000 164 345 3.1E-95 T 14-10-2018 Atu2094 fa483af607500b2642cfb03c693b512d 378 Gene3D G3DSA:3.40.50.2000 7 351 3.1E-95 T 14-10-2018 Atu2094 fa483af607500b2642cfb03c693b512d 378 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 361 31.204 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2094 fa483af607500b2642cfb03c693b512d 378 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 187 351 3.5E-36 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Atu2094 fa483af607500b2642cfb03c693b512d 378 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 356 1.3E-80 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2094 fa483af607500b2642cfb03c693b512d 378 SUPERFAMILY SSF53756 6 361 6.48E-99 T 14-10-2018 Atu1394 4d0a339565d3d2cd9d11a669aa933f49 225 Gene3D G3DSA:3.40.30.10 4 193 4.3E-48 T 14-10-2018 Atu1394 4d0a339565d3d2cd9d11a669aa933f49 225 SUPERFAMILY SSF47616 82 195 6.25E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu1394 4d0a339565d3d2cd9d11a669aa933f49 225 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 77 2.4E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu1394 4d0a339565d3d2cd9d11a669aa933f49 225 Gene3D G3DSA:1.20.1050.10 78 187 4.3E-48 T 14-10-2018 Atu1394 4d0a339565d3d2cd9d11a669aa933f49 225 SUPERFAMILY SSF52833 5 75 7.78E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3417 74387f15f053924a62b79bf3f29a4229 603 SUPERFAMILY SSF161098 80 284 9.29E-37 T 14-10-2018 IPR035906 MetI-like superfamily Atu3417 74387f15f053924a62b79bf3f29a4229 603 Gene3D G3DSA:1.10.3720.10 74 304 5.7E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu3417 74387f15f053924a62b79bf3f29a4229 603 Pfam PF00005 ABC transporter 370 528 2.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3417 74387f15f053924a62b79bf3f29a4229 603 SUPERFAMILY SSF52540 356 598 1.39E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3417 74387f15f053924a62b79bf3f29a4229 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 298 2.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3417 74387f15f053924a62b79bf3f29a4229 603 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 79 193 3.6E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu3417 74387f15f053924a62b79bf3f29a4229 603 SMART SM00382 379 576 1.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3417 74387f15f053924a62b79bf3f29a4229 603 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3417 74387f15f053924a62b79bf3f29a4229 603 Gene3D G3DSA:3.40.50.300 352 602 9.8E-78 T 14-10-2018 Atu0454 6de3a38302483cb2d4b57d85e5835083 183 Gene3D G3DSA:2.40.50.230 12 103 3.8E-18 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Atu0454 6de3a38302483cb2d4b57d85e5835083 183 Pfam PF04717 Type VI secretion system, phage-baseplate injector 16 109 1.8E-11 T 14-10-2018 IPR006531 Gp5 N-terminal Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 Pfam PF14579 Helix-hairpin-helix motif 767 859 4.0E-22 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 Pfam PF02811 PHP domain 5 118 7.5E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 SMART SM00481 4 71 5.3E-11 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 SUPERFAMILY SSF89550 10 243 1.35E-5 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1087 13.83 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 982 4.3E-162 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 694 1.5E-145 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu6093 8afe04bf7cedb73a19a181f14bcdfaa4 1087 Gene3D G3DSA:3.20.20.140 1 249 2.3E-57 T 14-10-2018 Atu3297 9524d78428eda8e353c73c27678c244b 460 SUPERFAMILY SSF47384 229 309 5.3E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu3297 9524d78428eda8e353c73c27678c244b 460 Gene3D G3DSA:3.30.450.20 39 151 1.8E-33 T 14-10-2018 Atu3297 9524d78428eda8e353c73c27678c244b 460 Gene3D G3DSA:1.10.287.130 221 306 9.2E-19 T 14-10-2018 Atu3297 9524d78428eda8e353c73c27678c244b 460 Gene3D G3DSA:3.30.450.20 1 38 1.9E-7 T 14-10-2018 Atu3297 9524d78428eda8e353c73c27678c244b 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 458 1.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu3297 9524d78428eda8e353c73c27678c244b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3297 9524d78428eda8e353c73c27678c244b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3297 9524d78428eda8e353c73c27678c244b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3297 9524d78428eda8e353c73c27678c244b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu3297 9524d78428eda8e353c73c27678c244b 460 Gene3D G3DSA:3.30.565.10 313 459 1.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3297 9524d78428eda8e353c73c27678c244b 460 SMART SM00388 244 312 3.7E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3297 9524d78428eda8e353c73c27678c244b 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 310 1.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3297 9524d78428eda8e353c73c27678c244b 460 SUPERFAMILY SSF55874 304 458 3.54E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3297 9524d78428eda8e353c73c27678c244b 460 SMART SM00387 354 460 1.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu6021 ae556c486940f9f46c64c81d7264b4d0 372 Gene3D G3DSA:3.50.50.60 8 349 1.8E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6021 ae556c486940f9f46c64c81d7264b4d0 372 SUPERFAMILY SSF54373 228 311 4.32E-13 T 14-10-2018 Atu6021 ae556c486940f9f46c64c81d7264b4d0 372 Pfam PF01266 FAD dependent oxidoreductase 7 342 5.6E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu6021 ae556c486940f9f46c64c81d7264b4d0 372 Gene3D G3DSA:3.30.9.10 92 310 1.8E-69 T 14-10-2018 Atu6021 ae556c486940f9f46c64c81d7264b4d0 372 SUPERFAMILY SSF51905 7 369 1.94E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4243 aaf750989950625554316c78d764c159 336 Gene3D G3DSA:3.40.190.10 124 245 2.1E-132 T 14-10-2018 Atu4243 aaf750989950625554316c78d764c159 336 Pfam PF13416 Bacterial extracellular solute-binding protein 42 300 1.1E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4243 aaf750989950625554316c78d764c159 336 SUPERFAMILY SSF53850 24 333 2.36E-62 T 14-10-2018 Atu4243 aaf750989950625554316c78d764c159 336 Gene3D G3DSA:3.40.190.10 29 333 2.1E-132 T 14-10-2018 Atu3532 41ac4954677e36d9771a22c07aa935a3 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 72 88 2.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3532 41ac4954677e36d9771a22c07aa935a3 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 72 2.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3532 41ac4954677e36d9771a22c07aa935a3 249 Gene3D G3DSA:1.20.120.530 104 237 1.8E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3532 41ac4954677e36d9771a22c07aa935a3 249 SUPERFAMILY SSF46785 34 102 4.28E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3532 41ac4954677e36d9771a22c07aa935a3 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 37 98 4.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3532 41ac4954677e36d9771a22c07aa935a3 249 Pfam PF07729 FCD domain 112 230 1.6E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu3532 41ac4954677e36d9771a22c07aa935a3 249 SMART SM00345 40 98 2.8E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3532 41ac4954677e36d9771a22c07aa935a3 249 SUPERFAMILY SSF48008 104 233 9.94E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3532 41ac4954677e36d9771a22c07aa935a3 249 Gene3D G3DSA:1.10.10.10 35 99 9.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3532 41ac4954677e36d9771a22c07aa935a3 249 SMART SM00895 108 231 9.5E-14 T 14-10-2018 IPR011711 GntR, C-terminal Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 Gene3D G3DSA:3.40.50.2300 31 344 1.7E-133 T 14-10-2018 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 Gene3D G3DSA:3.40.50.2300 143 271 1.7E-133 T 14-10-2018 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 Pfam PF13458 Periplasmic binding protein 25 360 1.6E-62 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 276 289 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 253 271 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 327 342 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 87 97 3.2E-31 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2422 3c0dbe98be76d5440ee999855f7bab64 372 SUPERFAMILY SSF53822 24 368 1.12E-96 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 SUPERFAMILY SSF88946 3 110 1.14E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 Pfam PF04542 Sigma-70 region 2 24 91 7.2E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 Pfam PF08281 Sigma-70, region 4 122 174 1.4E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 SUPERFAMILY SSF88659 95 179 4.58E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 178 5.3E-26 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 Gene3D G3DSA:1.10.1740.10 5 86 2.2E-28 T 14-10-2018 Atu1982 b0bbfa46ebf9ae55ebed18950b3259ac 180 Gene3D G3DSA:1.10.10.10 87 180 4.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4671 0f8aa8bb608df5a5e845aeba18777738 147 SMART SM00448 17 125 4.3E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4671 0f8aa8bb608df5a5e845aeba18777738 147 SUPERFAMILY SSF52172 16 135 1.1E-13 T 14-10-2018 IPR011006 CheY-like superfamily Atu4671 0f8aa8bb608df5a5e845aeba18777738 147 Pfam PF00072 Response regulator receiver domain 19 122 4.3E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4671 0f8aa8bb608df5a5e845aeba18777738 147 Gene3D G3DSA:3.40.50.2300 14 138 8.2E-25 T 14-10-2018 Atu2829 85e2873da402d314182241146b4ebcf5 264 Pfam PF13614 AAA domain 7 183 6.9E-59 T 14-10-2018 IPR025669 AAA domain Atu2829 85e2873da402d314182241146b4ebcf5 264 Gene3D G3DSA:3.40.50.300 3 263 6.6E-77 T 14-10-2018 Atu2829 85e2873da402d314182241146b4ebcf5 264 PIRSF PIRSF009320 6 76 1.2E-17 T 14-10-2018 Atu2829 85e2873da402d314182241146b4ebcf5 264 PIRSF PIRSF009320 99 264 9.9E-7 T 14-10-2018 Atu2829 85e2873da402d314182241146b4ebcf5 264 SUPERFAMILY SSF52540 7 259 1.97E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4330 841afb8efdf3f2402f06ca3a1303eee6 270 Gene3D G3DSA:1.10.510.10 53 269 1.6E-28 T 14-10-2018 Atu4330 841afb8efdf3f2402f06ca3a1303eee6 270 SUPERFAMILY SSF56112 57 268 4.66E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu4330 841afb8efdf3f2402f06ca3a1303eee6 270 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 157 169 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 Atu4330 841afb8efdf3f2402f06ca3a1303eee6 270 Pfam PF00069 Protein kinase domain 55 233 7.0E-21 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 SUPERFAMILY SSF55347 133 290 7.06E-12 T 14-10-2018 Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 Gene3D G3DSA:3.30.360.10 143 265 5.7E-100 T 14-10-2018 Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 Gene3D G3DSA:3.40.50.720 4 318 5.7E-100 T 14-10-2018 Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 SUPERFAMILY SSF51735 3 152 1.32E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 169 238 7.9E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 336 50.674 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 Atu4554 d4d200e949dd53db65a00f9c280fc0ca 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 1.4E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu2102 1707b8634a3612909e66f328e53c39e6 341 SUPERFAMILY SSF53335 19 315 1.57E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2102 1707b8634a3612909e66f328e53c39e6 341 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 17 311 3.2E-90 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atu2102 1707b8634a3612909e66f328e53c39e6 341 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 19 316 35.32 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atu2102 1707b8634a3612909e66f328e53c39e6 341 PIRSF PIRSF004486 15 317 6.5E-98 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atu2102 1707b8634a3612909e66f328e53c39e6 341 Gene3D G3DSA:3.40.50.150 19 312 5.0E-95 T 14-10-2018 Atu2102 1707b8634a3612909e66f328e53c39e6 341 Pfam PF01795 MraW methylase family 18 312 3.9E-93 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Atu2102 1707b8634a3612909e66f328e53c39e6 341 Gene3D G3DSA:1.10.150.170 120 222 5.0E-95 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Atu2102 1707b8634a3612909e66f328e53c39e6 341 SUPERFAMILY SSF81799 122 221 4.58E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 SUPERFAMILY SSF53706 222 630 8.82E-95 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 601 6.9E-221 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Gene3D G3DSA:3.30.70.20 134 213 4.2E-7 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Pfam PF00384 Molybdopterin oxidoreductase 280 603 4.2E-69 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 SUPERFAMILY SSF54862 84 220 4.18E-38 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 154 164 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 637 680 4.5E-16 T 14-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Gene3D G3DSA:3.40.228.10 350 402 1.5E-6 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Gene3D G3DSA:3.40.50.740 286 349 1.5E-6 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Gene3D G3DSA:3.40.50.1220 440 529 2.5E-5 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 107 119 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Gene3D G3DSA:3.40.50.740 537 643 6.5E-13 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Gene3D G3DSA:3.10.20.740 1 132 9.1E-32 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 69 8.7E-11 T 14-10-2018 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 SUPERFAMILY SSF54292 1 67 1.1E-16 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 SMART SM00929 92 132 1.9E-21 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1276 e03e55f7909cbdc8b3f2fe382de7802b 693 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 92 130 4.3E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0944 546f1ecfbc4df974d2709310918caa80 543 SUPERFAMILY SSF75005 91 404 3.45E-68 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Atu0944 546f1ecfbc4df974d2709310918caa80 543 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 93 401 1.6E-58 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal Atu0944 546f1ecfbc4df974d2709310918caa80 543 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 93 106 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 Atu0944 546f1ecfbc4df974d2709310918caa80 543 SUPERFAMILY SSF49899 407 541 3.32E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Atu0944 546f1ecfbc4df974d2709310918caa80 543 SMART SM00640 93 507 2.0E-49 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 Atu0944 546f1ecfbc4df974d2709310918caa80 543 Gene3D G3DSA:2.115.10.20 69 419 7.4E-77 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Atu0944 546f1ecfbc4df974d2709310918caa80 543 Gene3D G3DSA:2.60.120.560 428 542 1.3E-5 T 14-10-2018 Atu3932 ab81bcaeaca6753acb301bc1f5a3d6f8 266 Gene3D G3DSA:3.40.630.40 2 265 1.7E-67 T 14-10-2018 Atu3932 ab81bcaeaca6753acb301bc1f5a3d6f8 266 Pfam PF05013 N-formylglutamate amidohydrolase 12 228 2.1E-65 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase Atu3932 ab81bcaeaca6753acb301bc1f5a3d6f8 266 SUPERFAMILY SSF53187 5 262 1.0E-81 T 14-10-2018 Atu3932 ab81bcaeaca6753acb301bc1f5a3d6f8 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 7 262 2.2E-120 T 14-10-2018 IPR010247 N-formylglutamate deformylase Atu4459 f9d92049084f21a009452cc41286f1d7 290 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 208 286 1.4E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atu4459 f9d92049084f21a009452cc41286f1d7 290 Pfam PF12833 Helix-turn-helix domain 41 119 4.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4459 f9d92049084f21a009452cc41286f1d7 290 Gene3D G3DSA:1.10.10.60 18 116 8.5E-19 T 14-10-2018 Atu4459 f9d92049084f21a009452cc41286f1d7 290 SUPERFAMILY SSF46767 206 286 1.7E-28 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Atu4459 f9d92049084f21a009452cc41286f1d7 290 SUPERFAMILY SSF46689 19 69 2.11E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4459 f9d92049084f21a009452cc41286f1d7 290 Gene3D G3DSA:3.30.160.70 117 203 1.1E-9 T 14-10-2018 Atu4459 f9d92049084f21a009452cc41286f1d7 290 SMART SM00342 35 118 8.9E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4459 f9d92049084f21a009452cc41286f1d7 290 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 207 285 2.8E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Atu4459 f9d92049084f21a009452cc41286f1d7 290 Gene3D G3DSA:1.10.10.10 206 289 1.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4459 f9d92049084f21a009452cc41286f1d7 290 SUPERFAMILY SSF53155 124 194 2.12E-17 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Atu4560 9539e51d6feac928c178e27fbe3a5368 453 Pfam PF00295 Glycosyl hydrolases family 28 84 287 2.8E-20 T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 Atu4560 9539e51d6feac928c178e27fbe3a5368 453 Gene3D G3DSA:2.160.20.10 11 368 9.2E-77 T 14-10-2018 IPR012334 Pectin lyase fold Atu4560 9539e51d6feac928c178e27fbe3a5368 453 SMART SM00710 224 245 2100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu4560 9539e51d6feac928c178e27fbe3a5368 453 SMART SM00710 251 272 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu4560 9539e51d6feac928c178e27fbe3a5368 453 SMART SM00710 191 212 760.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu4560 9539e51d6feac928c178e27fbe3a5368 453 SMART SM00710 164 190 480.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu4560 9539e51d6feac928c178e27fbe3a5368 453 SUPERFAMILY SSF51126 13 362 1.26E-62 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Atu2164 b46c651eba0b81b2410e9a97c5687401 140 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 102 120 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atu2164 b46c651eba0b81b2410e9a97c5687401 140 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 138 1.5E-40 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atu2164 b46c651eba0b81b2410e9a97c5687401 140 Gene3D G3DSA:2.60.120.460 2 139 2.9E-39 T 14-10-2018 IPR035917 YjbQ-like superfamily Atu2164 b46c651eba0b81b2410e9a97c5687401 140 PIRSF PIRSF004681 1 140 7.6E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atu2164 b46c651eba0b81b2410e9a97c5687401 140 Pfam PF01894 Uncharacterised protein family UPF0047 18 138 1.4E-35 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Atu2164 b46c651eba0b81b2410e9a97c5687401 140 SUPERFAMILY SSF111038 3 138 3.01E-45 T 14-10-2018 IPR035917 YjbQ-like superfamily Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 334 358 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 416 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 301 322 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 436 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 26 49 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 381 4.9E-52 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Gene3D G3DSA:1.10.287.470 229 288 2.6E-17 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Gene3D G3DSA:2.40.50.100 289 325 2.6E-17 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Gene3D G3DSA:2.40.50.100 56 89 4.3E-8 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 18 434 7.9E-117 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Gene3D G3DSA:2.40.30.170 44 54 4.3E-8 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Pfam PF13437 HlyD family secretion protein 289 389 2.9E-16 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Gene3D G3DSA:2.40.30.170 326 413 2.6E-17 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Gene3D G3DSA:1.10.287.470 90 172 4.3E-8 T 14-10-2018 Atu2706 ac251569dde5624f3eabb078ae71b08d 437 Pfam PF13533 Biotin-lipoyl like 64 104 5.2E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atu1275 d88cd75d333ed3e9d315221054e15753 434 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 414 7.0E-31 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 Gene3D G3DSA:3.10.20.600 231 327 2.3E-34 T 14-10-2018 Atu1275 d88cd75d333ed3e9d315221054e15753 434 SUPERFAMILY SSF142019 3 238 2.75E-85 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 Gene3D G3DSA:3.40.50.11540 52 230 4.0E-82 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 216 6.0E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 Pfam PF10531 SLBB domain 242 292 4.5E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 Gene3D G3DSA:1.20.1440.230 328 428 1.4E-38 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 SUPERFAMILY SSF142984 240 325 1.57E-21 T 14-10-2018 Atu1275 d88cd75d333ed3e9d315221054e15753 434 SUPERFAMILY SSF140490 326 419 1.03E-35 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 416 9.3E-196 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 SMART SM00928 330 375 3.2E-25 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1275 d88cd75d333ed3e9d315221054e15753 434 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 166 181 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu3901 b0db33558e9964a1e513a8a969a35caf 111 SUPERFAMILY SSF50022 3 104 4.45E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atu3901 b0db33558e9964a1e513a8a969a35caf 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 102 5.6E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Atu3901 b0db33558e9964a1e513a8a969a35caf 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 101 1.0E-15 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Atu3901 b0db33558e9964a1e513a8a969a35caf 111 Gene3D G3DSA:2.102.10.10 2 111 7.1E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atu8180 d5417f839612a2443625ca14318de440 160 SUPERFAMILY SSF53335 12 134 1.19E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu8180 d5417f839612a2443625ca14318de440 160 Gene3D G3DSA:3.40.50.150 1 160 1.5E-51 T 14-10-2018 Atu8180 d5417f839612a2443625ca14318de440 160 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 1 159 2.0E-73 T 14-10-2018 IPR025690 Methyltransferase, putative Atu1426 874f40efb3636f58ffca5051eec6ff10 424 Gene3D G3DSA:3.20.20.120 127 423 9.4E-129 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PRINTS PR00148 Enolase signature 37 51 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PRINTS PR00148 Enolase signature 106 122 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PRINTS PR00148 Enolase signature 333 347 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PRINTS PR00148 Enolase signature 160 173 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PRINTS PR00148 Enolase signature 362 379 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PRINTS PR00148 Enolase signature 310 321 1.4E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 SMART SM01193 4 133 1.5E-96 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 ProSitePatterns PS00164 Enolase signature. 333 346 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 SMART SM01192 138 424 8.2E-218 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 SUPERFAMILY SSF54826 3 137 9.9E-56 T 14-10-2018 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 421 1.6E-130 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 Pfam PF03952 Enolase, N-terminal domain 4 133 8.1E-60 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 PIRSF PIRSF001400 1 423 2.9E-188 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 420 1.1E-205 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 SUPERFAMILY SSF51604 137 421 1.17E-126 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu1426 874f40efb3636f58ffca5051eec6ff10 424 Hamap MF_00318 Enolase [eno]. 2 410 44.397 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Atu1426 874f40efb3636f58ffca5051eec6ff10 424 Gene3D G3DSA:3.30.390.10 1 126 9.9E-56 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu4270 7d82647b2fe68bd10449882882fca118 198 SUPERFAMILY SSF55811 9 190 2.57E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu4270 7d82647b2fe68bd10449882882fca118 198 Pfam PF00293 NUDIX domain 46 165 1.0E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu4270 7d82647b2fe68bd10449882882fca118 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 12 187 7.7E-36 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Atu4270 7d82647b2fe68bd10449882882fca118 198 Gene3D G3DSA:3.90.79.10 6 191 1.2E-50 T 14-10-2018 Atu0079 037a85c7908e7a5637e303342d2efbbf 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 272 285 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atu0079 037a85c7908e7a5637e303342d2efbbf 330 Gene3D G3DSA:3.40.1190.20 2 325 5.6E-93 T 14-10-2018 IPR029056 Ribokinase-like Atu0079 037a85c7908e7a5637e303342d2efbbf 330 Pfam PF00294 pfkB family carbohydrate kinase 57 316 1.7E-44 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu0079 037a85c7908e7a5637e303342d2efbbf 330 SUPERFAMILY SSF53613 1 316 2.96E-80 T 14-10-2018 IPR029056 Ribokinase-like Atu2569 f0cf42f86f62f7ab3d8d420a3544fc84 607 Pfam PF13667 ThiC-associated domain 17 88 4.2E-23 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atu2569 f0cf42f86f62f7ab3d8d420a3544fc84 607 Gene3D G3DSA:3.20.20.540 196 508 3.1E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atu2569 f0cf42f86f62f7ab3d8d420a3544fc84 607 Pfam PF01964 Radical SAM ThiC family 128 572 1.7E-199 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atu2569 f0cf42f86f62f7ab3d8d420a3544fc84 607 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 127 577 99.001 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atu2569 f0cf42f86f62f7ab3d8d420a3544fc84 607 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 127 575 4.0E-213 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Atu3149 3fc9523be2729e1f88f6d8b8b1a8c734 278 SUPERFAMILY SSF161098 10 278 2.52E-59 T 14-10-2018 IPR035906 MetI-like superfamily Atu3149 3fc9523be2729e1f88f6d8b8b1a8c734 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 271 3.8E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3149 3fc9523be2729e1f88f6d8b8b1a8c734 278 Gene3D G3DSA:1.10.3720.10 2 270 2.5E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu4783 5e602039924dee2232f9ae55f34bb7e1 342 SUPERFAMILY SSF53850 23 321 5.2E-67 T 14-10-2018 Atu4783 5e602039924dee2232f9ae55f34bb7e1 342 PIRSF PIRSF002825 2 334 2.1E-58 T 14-10-2018 IPR026045 Ferric binding protein Atu4783 5e602039924dee2232f9ae55f34bb7e1 342 Gene3D G3DSA:3.40.190.10 132 318 3.5E-99 T 14-10-2018 Atu4783 5e602039924dee2232f9ae55f34bb7e1 342 Gene3D G3DSA:3.40.190.10 31 304 3.5E-99 T 14-10-2018 Atu4783 5e602039924dee2232f9ae55f34bb7e1 342 Pfam PF13343 Bacterial extracellular solute-binding protein 75 318 5.4E-34 T 14-10-2018 Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 Gene3D G3DSA:2.40.50.940 223 347 1.3E-25 T 14-10-2018 Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 Gene3D G3DSA:2.40.50.140 278 338 1.3E-25 T 14-10-2018 Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 SUPERFAMILY SSF52540 4 243 7.56E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 Pfam PF00005 ABC transporter 21 162 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 SMART SM00382 29 212 4.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 Gene3D G3DSA:3.40.50.300 3 222 3.7E-65 T 14-10-2018 Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 SUPERFAMILY SSF50331 237 353 5.1E-22 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3188 4f4c63dbe7562969a6d27acc0a33d87b 353 Pfam PF08402 TOBE domain 271 346 2.0E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3599 649de84954bdfab0eaba6de9508acf79 466 ProSitePatterns PS00163 Fumarate lyases signature. 285 294 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00149 Fumarate lyase superfamily signature 285 301 6.3E-30 T 14-10-2018 IPR000362 Fumarate lyase family Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00149 Fumarate lyase superfamily signature 157 175 6.3E-30 T 14-10-2018 IPR000362 Fumarate lyase family Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00149 Fumarate lyase superfamily signature 112 130 6.3E-30 T 14-10-2018 IPR000362 Fumarate lyase family Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00149 Fumarate lyase superfamily signature 241 268 6.3E-30 T 14-10-2018 IPR000362 Fumarate lyase family Atu3599 649de84954bdfab0eaba6de9508acf79 466 Pfam PF00206 Lyase 16 310 1.8E-77 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Atu3599 649de84954bdfab0eaba6de9508acf79 466 TIGRFAM TIGR00838 argH: argininosuccinate lyase 13 461 6.8E-184 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00145 Argininosuccinate lyase family signature 111 133 1.6E-67 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00145 Argininosuccinate lyase family signature 285 301 1.6E-67 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00145 Argininosuccinate lyase family signature 320 339 1.6E-67 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00145 Argininosuccinate lyase family signature 241 265 1.6E-67 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00145 Argininosuccinate lyase family signature 152 172 1.6E-67 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 PRINTS PR00145 Argininosuccinate lyase family signature 203 219 1.6E-67 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 Hamap MF_00006 Argininosuccinate lyase [argH]. 12 464 42.964 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu3599 649de84954bdfab0eaba6de9508acf79 466 Gene3D G3DSA:1.10.275.10 35 239 1.8E-191 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Atu3599 649de84954bdfab0eaba6de9508acf79 466 Gene3D G3DSA:1.10.40.30 370 443 1.8E-191 T 14-10-2018 Atu3599 649de84954bdfab0eaba6de9508acf79 466 SUPERFAMILY SSF48557 16 464 2.04E-147 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu3599 649de84954bdfab0eaba6de9508acf79 466 Pfam PF14698 Argininosuccinate lyase C-terminal 373 442 4.4E-26 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu3599 649de84954bdfab0eaba6de9508acf79 466 Gene3D G3DSA:1.20.200.10 129 459 1.8E-191 T 14-10-2018 Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 SUPERFAMILY SSF53067 218 397 2.49E-21 T 14-10-2018 Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 Gene3D G3DSA:3.30.420.40 95 209 6.6E-33 T 14-10-2018 Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 Gene3D G3DSA:3.30.420.40 210 362 6.6E-33 T 14-10-2018 Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 Gene3D G3DSA:1.10.10.10 5 80 1.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 SUPERFAMILY SSF46785 13 78 1.32E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 Pfam PF00480 ROK family 128 303 1.5E-14 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu3577 fc9a54d31fb38340fb75d35d45f1eef7 414 SUPERFAMILY SSF53067 93 202 6.31E-9 T 14-10-2018 Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 8.4E-66 T 14-10-2018 Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 9.8E-100 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 4.6E-6 T 14-10-2018 Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.7E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.7E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.7E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.7E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.7E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 Gene3D G3DSA:3.40.50.720 1 245 1.2E-88 T 14-10-2018 Atu1095 c999a1c5ad6d967f26d9e05a0293b97b 245 SUPERFAMILY SSF51735 6 244 1.04E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0085 5a71369c49876264d52761fde3a8a04c 315 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 39 187 1.8E-51 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Atu0085 5a71369c49876264d52761fde3a8a04c 315 Gene3D G3DSA:3.30.2350.10 7 253 6.6E-81 T 14-10-2018 Atu0085 5a71369c49876264d52761fde3a8a04c 315 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 18 226 1.9E-65 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0085 5a71369c49876264d52761fde3a8a04c 315 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 257 314 7.6E-7 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0085 5a71369c49876264d52761fde3a8a04c 315 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 188 253 2.6E-15 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Atu0085 5a71369c49876264d52761fde3a8a04c 315 SUPERFAMILY SSF88697 256 314 1.64E-5 T 14-10-2018 IPR015947 PUA-like superfamily Atu0085 5a71369c49876264d52761fde3a8a04c 315 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 17 314 18.33 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0085 5a71369c49876264d52761fde3a8a04c 315 SUPERFAMILY SSF55120 16 229 4.03E-74 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu3045 30ebb6f19a5fb2ef3f6f4dbec8ab4a68 115 SUPERFAMILY SSF51182 15 113 2.56E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3045 30ebb6f19a5fb2ef3f6f4dbec8ab4a68 115 Gene3D G3DSA:2.60.120.10 1 115 1.3E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3045 30ebb6f19a5fb2ef3f6f4dbec8ab4a68 115 Pfam PF05899 Protein of unknown function (DUF861) 44 107 3.4E-6 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Atu0300 8b7970e7686a622828dffef32518badc 197 Gene3D G3DSA:3.40.50.150 9 189 2.0E-14 T 14-10-2018 Atu0300 8b7970e7686a622828dffef32518badc 197 Pfam PF13649 Methyltransferase domain 56 148 2.2E-7 T 14-10-2018 Atu0300 8b7970e7686a622828dffef32518badc 197 SUPERFAMILY SSF53335 18 137 5.47E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3888 1f77994cf93c4eb7fb338c486c190f0b 339 Gene3D G3DSA:1.20.1530.20 1 319 6.6E-32 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu3888 1f77994cf93c4eb7fb338c486c190f0b 339 PIRSF PIRSF026166 1 334 2.1E-137 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter Atu3888 1f77994cf93c4eb7fb338c486c190f0b 339 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 7 317 7.9E-99 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter Atu6070 ce3c123b755d97f456d4cfb8941e34bb 435 Gene3D G3DSA:3.40.50.2300 175 341 1.4E-32 T 14-10-2018 Atu6070 ce3c123b755d97f456d4cfb8941e34bb 435 Pfam PF13407 Periplasmic binding protein domain 57 318 3.7E-28 T 14-10-2018 IPR025997 Periplasmic binding protein Atu6070 ce3c123b755d97f456d4cfb8941e34bb 435 Gene3D G3DSA:3.40.50.2300 54 174 1.0E-8 T 14-10-2018 Atu6070 ce3c123b755d97f456d4cfb8941e34bb 435 SUPERFAMILY SSF53822 56 369 6.28E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu2756 d61c1f3b6b7f5302312e0f88137ab6ec 294 Gene3D G3DSA:3.10.129.90 8 293 9.3E-110 T 14-10-2018 Atu2756 d61c1f3b6b7f5302312e0f88137ab6ec 294 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 18 289 9.0E-98 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 Atu2756 d61c1f3b6b7f5302312e0f88137ab6ec 294 SUPERFAMILY SSF54637 122 291 1.97E-58 T 14-10-2018 IPR029069 HotDog domain superfamily Atu2756 d61c1f3b6b7f5302312e0f88137ab6ec 294 SUPERFAMILY SSF54637 11 120 1.42E-42 T 14-10-2018 IPR029069 HotDog domain superfamily Atu2756 d61c1f3b6b7f5302312e0f88137ab6ec 294 Pfam PF13622 Thioesterase-like superfamily 35 288 9.3E-61 T 14-10-2018 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 Gene3D G3DSA:1.10.760.10 32 161 3.6E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 PRINTS PR00604 Class IA and IB cytochrome C signature 117 133 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 PRINTS PR00604 Class IA and IB cytochrome C signature 71 78 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 PRINTS PR00604 Class IA and IB cytochrome C signature 83 98 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 PRINTS PR00604 Class IA and IB cytochrome C signature 136 146 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 PRINTS PR00604 Class IA and IB cytochrome C signature 153 161 1.7E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 Pfam PF00034 Cytochrome c 62 161 4.6E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4027 eed1cd4a7741e71370976003b3b287ab 166 SUPERFAMILY SSF46626 59 163 8.77E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu2676 a31738fe9beb3cc3bd8338c732ad8a1c 101 SUPERFAMILY SSF55248 3 95 3.01E-31 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atu2676 a31738fe9beb3cc3bd8338c732ad8a1c 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 94 3.4E-28 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atu2676 a31738fe9beb3cc3bd8338c732ad8a1c 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 3 96 24.146 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atu2676 a31738fe9beb3cc3bd8338c732ad8a1c 101 Gene3D G3DSA:3.30.1360.20 1 98 4.3E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 Gene3D G3DSA:2.40.50.100 250 341 1.2E-12 T 14-10-2018 Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 SMART SM00382 28 211 2.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 Gene3D G3DSA:2.40.50.140 264 328 1.2E-12 T 14-10-2018 Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 Gene3D G3DSA:3.40.50.300 1 234 1.0E-74 T 14-10-2018 Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 Pfam PF00005 ABC transporter 20 161 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 SUPERFAMILY SSF50331 236 343 1.34E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 SUPERFAMILY SSF52540 4 242 9.42E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4650 9a081d581fe9e7f06b1ddff5b75f18d3 346 Pfam PF03459 TOBE domain 280 326 1.4E-6 T 14-10-2018 IPR005116 Transport-associated OB, type 1 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 104 1.0E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 Gene3D G3DSA:3.40.30.10 3 106 1.1E-35 T 14-10-2018 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 PRINTS PR00421 Thioredoxin family signature 30 39 8.9E-10 T 14-10-2018 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 PRINTS PR00421 Thioredoxin family signature 22 30 8.9E-10 T 14-10-2018 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 PRINTS PR00421 Thioredoxin family signature 70 81 8.9E-10 T 14-10-2018 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 PIRSF PIRSF000077 1 106 5.4E-43 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 Pfam PF00085 Thioredoxin 4 103 2.7E-34 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atu0022 c34d09f7ddb639517d2f338e9ade1e3b 106 SUPERFAMILY SSF52833 4 105 4.86E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1072 ce296dc820486e462a7ffa93f473b614 122 Gene3D G3DSA:3.40.960.10 19 121 2.6E-33 T 14-10-2018 Atu1072 ce296dc820486e462a7ffa93f473b614 122 SUPERFAMILY SSF52980 7 119 4.29E-26 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atu1072 ce296dc820486e462a7ffa93f473b614 122 Pfam PF04480 Protein of unknown function (DUF559) 10 116 4.5E-40 T 14-10-2018 IPR007569 Protein of unknown function DUF559 Atu4546 982c10aed3727baae313f3055e1dd878 253 Pfam PF01614 Bacterial transcriptional regulator 124 249 7.1E-28 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu4546 982c10aed3727baae313f3055e1dd878 253 SMART SM00346 9 97 6.1E-24 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4546 982c10aed3727baae313f3055e1dd878 253 SUPERFAMILY SSF55781 73 252 1.23E-45 T 14-10-2018 Atu4546 982c10aed3727baae313f3055e1dd878 253 Gene3D G3DSA:3.30.450.40 77 253 3.3E-50 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4546 982c10aed3727baae313f3055e1dd878 253 Gene3D G3DSA:1.10.10.10 1 76 8.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4546 982c10aed3727baae313f3055e1dd878 253 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 5 252 5.7E-104 T 14-10-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 Atu4546 982c10aed3727baae313f3055e1dd878 253 Pfam PF09339 IclR helix-turn-helix domain 12 62 5.6E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4546 982c10aed3727baae313f3055e1dd878 253 SUPERFAMILY SSF46785 11 78 1.15E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3977 52ece3771c34fd2c0703e61492123247 989 Gene3D G3DSA:3.80.10.10 535 801 2.1E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3977 52ece3771c34fd2c0703e61492123247 989 Gene3D G3DSA:3.80.10.10 802 981 1.8E-10 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3977 52ece3771c34fd2c0703e61492123247 989 Gene3D G3DSA:3.80.10.10 273 534 1.0E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3977 52ece3771c34fd2c0703e61492123247 989 Gene3D G3DSA:3.80.10.10 2 272 2.2E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 182 264 1.9E-16 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 145 1.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 54 3.0E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 Gene3D G3DSA:2.160.10.10 2 195 6.3E-46 T 14-10-2018 Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 10 264 8.2E-98 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 7 266 41.125 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 Gene3D G3DSA:1.20.1180.10 200 269 1.0E-9 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 SUPERFAMILY SSF51161 5 238 5.53E-60 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 16 44 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu1384 5ad09754a15c02b87352b4caa6e2c10e 271 PIRSF PIRSF000456 7 271 3.4E-97 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Atu0713 bc289b1dc8f7d0a7a3a361c0294afbd8 121 PIRSF PIRSF032126 1 121 2.7E-46 T 14-10-2018 IPR016989 ATP synthase protein I, alphaproteobacterial Atu0713 bc289b1dc8f7d0a7a3a361c0294afbd8 121 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 44 96 4.7E-16 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 245 8.3E-16 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 SUPERFAMILY SSF102735 1 139 1.07E-32 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 PIRSF PIRSF003095 1 447 1.5E-131 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 SUPERFAMILY SSF54534 108 248 5.5E-34 T 14-10-2018 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Hamap MF_00303 Trigger factor [tig]. 1 431 20.458 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 TIGRFAM TIGR00115 tig: trigger factor 11 425 6.9E-128 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Pfam PF05697 Bacterial trigger factor protein (TF) 1 150 5.8E-35 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Gene3D G3DSA:3.10.50.40 158 254 7.6E-88 T 14-10-2018 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Gene3D G3DSA:3.30.70.1050 1 123 1.6E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 270 425 3.5E-44 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 Gene3D G3DSA:1.10.3120.10 124 429 7.6E-88 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Atu1664 eaa0abf0a061dc1d882486045b4c7460 492 SUPERFAMILY SSF109998 256 441 4.47E-45 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atu3123 e3f94db319a0c23a6827268e8b31f553 78 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 56 7.6E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 3.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 3.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 3.3E-5 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 Gene3D G3DSA:1.20.5.1150 14 52 2.1E-10 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 10 55 13.977 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 54 5.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3123 e3f94db319a0c23a6827268e8b31f553 78 Pfam PF01165 Ribosomal protein S21 2 55 3.7E-19 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.30.559.30 226 473 1.3E-131 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00668 Condensation domain 1130 1525 4.3E-35 T 14-10-2018 IPR001242 Condensation domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00668 Condensation domain 46 486 7.6E-93 T 14-10-2018 IPR001242 Condensation domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SMART SM00823 Phosphopantetheine attachment site 1005 1074 5.5E-9 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SMART SM00823 Phosphopantetheine attachment site 2288 2357 0.0013 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.30.559.30 1270 1526 1.3E-88 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.30.559.10 1090 1267 1.7E-55 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.40.50.12780 495 888 1.4E-122 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1029 1044 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF56801 467 1017 2.09E-142 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1573 1973 3.5E-125 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 528 918 2.5E-122 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF52777 1089 1285 8.56E-25 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.30.559.10 47 417 1.3E-131 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00881 Nitroreductase family 2031 2208 1.0E-18 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1684 1695 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF56801 1526 2299 4.06E-141 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF47336 998 1071 4.84E-20 T 14-10-2018 IPR036736 ACP-like superfamily Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.30.300.30 889 992 9.9E-29 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00550 Phosphopantetheine attachment site 1006 1070 9.5E-15 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00550 Phosphopantetheine attachment site 2290 2352 8.6E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 2045 2205 9.3E-26 T 14-10-2018 IPR020051 SagB-type dehydrogenase domain Atu3682 23eb44de211034e9cfc804c614727d7f 2399 ProSitePatterns PS00455 Putative AMP-binding domain signature. 644 655 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.30.300.30 1943 2015 9.6E-12 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00501 AMP-binding enzyme 508 895 6.5E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Pfam PF00501 AMP-binding enzyme 1552 1948 3.2E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF47336 2281 2353 1.16E-16 T 14-10-2018 IPR036736 ACP-like superfamily Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:1.10.1200.10 993 1080 2.7E-26 T 14-10-2018 IPR036736 ACP-like superfamily Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.40.109.10 2016 2210 3.6E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2312 2327 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF52777 1273 1520 1.06E-41 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.40.50.1820 2277 2378 1.5E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF52777 48 222 3.34E-42 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF52777 230 475 1.56E-55 T 14-10-2018 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 SUPERFAMILY SSF55469 2030 2214 5.71E-17 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu3682 23eb44de211034e9cfc804c614727d7f 2399 Gene3D G3DSA:3.40.50.12780 1542 1941 3.2E-122 T 14-10-2018 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 Gene3D G3DSA:3.30.540.10 2 149 5.5E-34 T 14-10-2018 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 Pfam PF00459 Inositol monophosphatase family 8 251 7.9E-36 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 SUPERFAMILY SSF56655 7 271 1.19E-57 T 14-10-2018 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 Gene3D G3DSA:3.40.190.80 158 273 9.9E-12 T 14-10-2018 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 1.5E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.5E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 1.5E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1856 2d8bf7760de58ed46a430dd82937673b 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 1.5E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4810 c448d63e9ccab3a5f8e38a29825f82b1 439 Pfam PF13204 Protein of unknown function (DUF4038) 38 343 3.4E-74 T 14-10-2018 IPR025277 Putative glycohydrolase domain DUF4038 Atu4810 c448d63e9ccab3a5f8e38a29825f82b1 439 SUPERFAMILY SSF51445 74 275 5.34E-14 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu4810 c448d63e9ccab3a5f8e38a29825f82b1 439 Pfam PF12904 Putative collagen-binding domain of a collagenase 345 435 6.8E-9 T 14-10-2018 IPR024749 Putative collagen-binding domain Atu4810 c448d63e9ccab3a5f8e38a29825f82b1 439 Gene3D G3DSA:3.20.20.80 36 336 1.4E-53 T 14-10-2018 Atu1079 30c716881df4897bf04018f5c6bde1d1 89 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 74 1.4E-24 T 14-10-2018 IPR022789 Antitoxin ParD Atu1079 30c716881df4897bf04018f5c6bde1d1 89 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 5 75 5.0E-8 T 14-10-2018 IPR022789 Antitoxin ParD Atu1079 30c716881df4897bf04018f5c6bde1d1 89 Gene3D G3DSA:1.10.8.1250 8 87 1.2E-13 T 14-10-2018 IPR038296 Antitoxin ParD superfamily Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 Pfam PF08238 Sel1 repeat 158 193 4.2E-7 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 Pfam PF08238 Sel1 repeat 120 148 31.0 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 Pfam PF08238 Sel1 repeat 76 106 0.029 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 Gene3D G3DSA:1.25.40.10 37 262 2.6E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 SMART SM00671 118 156 9.8 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 SMART SM00671 72 107 3.0E-5 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 SMART SM00671 40 71 290.0 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 SMART SM00671 158 193 1.3E-6 T 14-10-2018 IPR006597 Sel1-like repeat Atu1715 11bf9f430e4e8ad8eda417f7c8107b65 264 SUPERFAMILY SSF81901 41 235 2.44E-26 T 14-10-2018 Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 Gene3D G3DSA:3.40.1260.20 580 686 7.6E-25 T 14-10-2018 Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 604 7.8E-154 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 SUPERFAMILY SSF50249 40 304 6.37E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 Gene3D G3DSA:2.40.50.140 36 122 2.9E-23 T 14-10-2018 Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 Gene3D G3DSA:2.40.50.140 207 298 6.2E-13 T 14-10-2018 Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 Hamap MF_00970 Ribonuclease E [rne]. 2 974 37.838 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Atu1339 b6ca8d2f9d3125549580e4124fc3b24f 977 Pfam PF10150 Ribonuclease E/G family 300 571 1.8E-95 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Atu4297 113bd6a0a4023b105624f812764c773d 297 Pfam PF12833 Helix-turn-helix domain 203 282 5.8E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4297 113bd6a0a4023b105624f812764c773d 297 SMART SM00342 197 280 3.3E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4297 113bd6a0a4023b105624f812764c773d 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4297 113bd6a0a4023b105624f812764c773d 297 SUPERFAMILY SSF51182 24 77 6.85E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4297 113bd6a0a4023b105624f812764c773d 297 SUPERFAMILY SSF46689 181 230 8.87E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4297 113bd6a0a4023b105624f812764c773d 297 Gene3D G3DSA:1.10.10.60 231 288 5.2E-18 T 14-10-2018 Atu4297 113bd6a0a4023b105624f812764c773d 297 Gene3D G3DSA:1.10.10.60 171 230 1.2E-11 T 14-10-2018 Atu4297 113bd6a0a4023b105624f812764c773d 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 6.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4297 113bd6a0a4023b105624f812764c773d 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 6.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4297 113bd6a0a4023b105624f812764c773d 297 SUPERFAMILY SSF46689 233 285 3.0E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4297 113bd6a0a4023b105624f812764c773d 297 Gene3D G3DSA:2.60.120.10 9 97 2.3E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1111 966c3d0a5daf4c53c4be34b80287761b 149 SUPERFAMILY SSF102400 1 139 1.7E-42 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Atu1111 966c3d0a5daf4c53c4be34b80287761b 149 Gene3D G3DSA:3.40.50.10110 1 138 5.7E-20 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Atu1111 966c3d0a5daf4c53c4be34b80287761b 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 134 4.8E-36 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 SMART SM00382 49 248 8.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 311 6.2E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 Pfam PF00005 ABC transporter 42 198 1.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 SUPERFAMILY SSF52540 20 270 7.99E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 Gene3D G3DSA:3.40.50.300 18 353 1.7E-92 T 14-10-2018 Atu1200 f40e39c7033358ed4d4ef4fe87c20f44 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 338 2.5E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5200 fd6b06aacf0c7292adc07cf6b67ee953 452 Pfam PF07690 Major Facilitator Superfamily 24 417 1.0E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu5200 fd6b06aacf0c7292adc07cf6b67ee953 452 SUPERFAMILY SSF103473 21 427 1.26E-11 T 14-10-2018 IPR036259 MFS transporter superfamily Atu5200 fd6b06aacf0c7292adc07cf6b67ee953 452 Gene3D G3DSA:1.20.1250.20 15 202 2.2E-8 T 14-10-2018 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 5 474 29.86 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 205 6.1E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 219 6.1E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 6.1E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 6.1E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 6.1E-24 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 Gene3D G3DSA:1.10.10.350 374 481 1.3E-23 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 322 3.8E-117 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 SUPERFAMILY SSF48163 316 474 2.62E-32 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 Gene3D G3DSA:3.40.50.620 1 331 2.0E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 472 8.0E-140 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Atu4474 17a25313cd0d30e9675a1e4f4c3019e7 485 SUPERFAMILY SSF52374 6 314 3.1E-104 T 14-10-2018 Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 730 752 1.5E-6 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 787 818 2.5E-10 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 SMART SM00869 1069 1331 2.1E-41 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 Gene3D G3DSA:2.40.128.130 1060 1341 3.5E-58 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 852 1340 2.3E-38 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 SUPERFAMILY SSF103515 1013 1341 9.29E-56 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 245 292 1.6E-12 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 556 608 6.8E-6 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 453 500 8.7E-13 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 502 551 1.5E-9 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 347 399 1.1E-5 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 403 449 3.3E-10 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 613 658 5.2E-9 T 14-10-2018 IPR030895 T5SS/PEP-CTERM-associated repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 Pfam PF12951 Passenger-associated-transport-repeat 788 817 2.8E-8 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 Pfam PF12951 Passenger-associated-transport-repeat 729 752 4.8E-7 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat Atu3276 744dc8953d992d7441465d1eb7c1c680 1341 Pfam PF03797 Autotransporter beta-domain 1072 1321 1.4E-49 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu5457 465fbb1109786fe6799629eff7fef498 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.2E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5457 465fbb1109786fe6799629eff7fef498 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.2E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5457 465fbb1109786fe6799629eff7fef498 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.2E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5457 465fbb1109786fe6799629eff7fef498 302 SMART SM01130 4 295 2.7E-44 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5457 465fbb1109786fe6799629eff7fef498 302 Pfam PF00701 Dihydrodipicolinate synthetase family 5 287 1.4E-29 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5457 465fbb1109786fe6799629eff7fef498 302 Gene3D G3DSA:3.20.20.70 2 299 3.8E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu5457 465fbb1109786fe6799629eff7fef498 302 PIRSF PIRSF001365 1 301 7.2E-47 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5457 465fbb1109786fe6799629eff7fef498 302 SUPERFAMILY SSF51569 5 296 1.15E-54 T 14-10-2018 Atu3426 150f8fbee4b6f7b1f470ee3da34fdd9d 389 Pfam PF00296 Luciferase-like monooxygenase 9 331 9.3E-80 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3426 150f8fbee4b6f7b1f470ee3da34fdd9d 389 Gene3D G3DSA:3.20.20.30 7 364 5.4E-133 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3426 150f8fbee4b6f7b1f470ee3da34fdd9d 389 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 9 355 1.0E-177 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 Atu3426 150f8fbee4b6f7b1f470ee3da34fdd9d 389 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 8 383 73.435 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 Atu3426 150f8fbee4b6f7b1f470ee3da34fdd9d 389 SUPERFAMILY SSF51679 8 355 4.06E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PIRSF PIRSF005419 7 695 5.2E-213 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 694 2.3E-268 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 1.2E-50 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 1.2E-50 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 1.2E-50 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 1.2E-50 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 1.2E-50 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 1.2E-50 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 Gene3D G3DSA:1.10.490.80 594 694 5.0E-13 T 14-10-2018 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 Gene3D G3DSA:1.10.8.540 504 593 2.6E-21 T 14-10-2018 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 Gene3D G3DSA:3.40.30.60 362 503 1.7E-30 T 14-10-2018 Atu0581 e3a71103d9083ee3ff9f4b03bf59c883 695 Pfam PF00771 FHIPEP family 28 685 9.1E-235 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Atu1789 c0369c762d66bbe1da703be9a7bdc412 357 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 28 311 1.5E-52 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Atu1789 c0369c762d66bbe1da703be9a7bdc412 357 Gene3D G3DSA:3.40.50.2300 29 285 3.3E-130 T 14-10-2018 Atu1789 c0369c762d66bbe1da703be9a7bdc412 357 Gene3D G3DSA:3.40.50.2300 132 347 3.3E-130 T 14-10-2018 Atu5058 c0f374155974b961e3097a5cb4a7a06a 419 Pfam PF13416 Bacterial extracellular solute-binding protein 45 352 1.6E-48 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5058 c0f374155974b961e3097a5cb4a7a06a 419 SUPERFAMILY SSF53850 27 409 1.04E-76 T 14-10-2018 Atu5058 c0f374155974b961e3097a5cb4a7a06a 419 Gene3D G3DSA:3.40.190.10 31 373 1.2E-89 T 14-10-2018 Atu5058 c0f374155974b961e3097a5cb4a7a06a 419 Gene3D G3DSA:3.40.190.10 142 408 1.2E-89 T 14-10-2018 Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 Gene3D G3DSA:3.40.50.300 3 221 1.0E-65 T 14-10-2018 Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 SUPERFAMILY SSF52540 4 242 6.12E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 Pfam PF00005 ABC transporter 20 161 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 SUPERFAMILY SSF50331 236 360 1.24E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 Gene3D G3DSA:2.40.50.140 279 344 2.0E-24 T 14-10-2018 Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 Gene3D G3DSA:2.40.50.940 222 353 2.0E-24 T 14-10-2018 Atu5462 f7c4d18d2815c9ab3645e6f9197a238e 360 SMART SM00382 28 211 3.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 SUPERFAMILY SSF50331 237 362 5.1E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 Pfam PF00005 ABC transporter 20 162 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 Gene3D G3DSA:2.40.50.940 219 355 6.6E-29 T 14-10-2018 Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 Gene3D G3DSA:2.40.50.140 289 346 6.6E-29 T 14-10-2018 Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 Gene3D G3DSA:3.40.50.300 2 217 1.1E-62 T 14-10-2018 Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 SUPERFAMILY SSF52540 5 243 7.7E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 SMART SM00382 29 212 6.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3349 da1b80386fcfae5c214574245d4ee4f0 362 Pfam PF08402 TOBE domain 282 349 5.4E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 68 77 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 SUPERFAMILY SSF53187 5 391 9.43E-64 T 14-10-2018 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 104 142 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 Gene3D G3DSA:3.40.630.10 11 380 2.5E-116 T 14-10-2018 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 Gene3D G3DSA:3.30.70.360 186 311 2.5E-116 T 14-10-2018 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 11 390 7.7E-125 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 Pfam PF07687 Peptidase dimerisation domain 182 289 7.1E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu0370 c74e688000e1c7defdb72a792b5b9151 398 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 393 48.674 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Atu0370 c74e688000e1c7defdb72a792b5b9151 398 SUPERFAMILY SSF55031 186 288 5.53E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu0370 c74e688000e1c7defdb72a792b5b9151 398 Pfam PF01546 Peptidase family M20/M25/M40 69 389 1.5E-46 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu1159 9c7fcd38808b7b8a420b2dfe3c5728df 252 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 7 245 39.085 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Atu1159 9c7fcd38808b7b8a420b2dfe3c5728df 252 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 1.3E-16 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Atu1159 9c7fcd38808b7b8a420b2dfe3c5728df 252 PIRSF PIRSF037208 1 252 1.4E-79 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Atu1159 9c7fcd38808b7b8a420b2dfe3c5728df 252 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 239 1.4E-34 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Atu1159 9c7fcd38808b7b8a420b2dfe3c5728df 252 SUPERFAMILY SSF55729 83 244 1.7E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1577 7809faf27d386d099424f0f1fbce42f7 312 SUPERFAMILY SSF53850 2 226 2.41E-46 T 14-10-2018 Atu1577 7809faf27d386d099424f0f1fbce42f7 312 SMART SM00062 6 235 6.1E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1577 7809faf27d386d099424f0f1fbce42f7 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 7 223 3.2E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1577 7809faf27d386d099424f0f1fbce42f7 312 Gene3D G3DSA:3.40.190.10 1 212 2.9E-48 T 14-10-2018 Atu1577 7809faf27d386d099424f0f1fbce42f7 312 Gene3D G3DSA:3.40.190.10 93 198 2.9E-48 T 14-10-2018 Atu4692 ccded5e82faab4b270386667aaae5ba9 724 Pfam PF08448 PAS fold 34 144 3.4E-14 T 14-10-2018 IPR013656 PAS fold-4 Atu4692 ccded5e82faab4b270386667aaae5ba9 724 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 149 2.0E-11 T 14-10-2018 IPR000014 PAS domain Atu4692 ccded5e82faab4b270386667aaae5ba9 724 SUPERFAMILY SSF141868 465 713 5.1E-87 T 14-10-2018 IPR035919 EAL domain superfamily Atu4692 ccded5e82faab4b270386667aaae5ba9 724 Gene3D G3DSA:3.30.70.270 285 462 3.8E-55 T 14-10-2018 Atu4692 ccded5e82faab4b270386667aaae5ba9 724 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 288 447 3.5E-43 T 14-10-2018 IPR000160 GGDEF domain Atu4692 ccded5e82faab4b270386667aaae5ba9 724 SUPERFAMILY SSF55073 295 451 1.33E-45 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4692 ccded5e82faab4b270386667aaae5ba9 724 Gene3D G3DSA:3.30.450.20 23 155 8.4E-25 T 14-10-2018 Atu4692 ccded5e82faab4b270386667aaae5ba9 724 Gene3D G3DSA:3.20.20.450 463 713 2.5E-98 T 14-10-2018 IPR035919 EAL domain superfamily Atu4692 ccded5e82faab4b270386667aaae5ba9 724 SMART SM00052 459 704 1.9E-112 T 14-10-2018 IPR001633 EAL domain Atu4692 ccded5e82faab4b270386667aaae5ba9 724 SUPERFAMILY SSF55785 26 141 6.98E-16 T 14-10-2018 IPR035965 PAS domain superfamily Atu4692 ccded5e82faab4b270386667aaae5ba9 724 Pfam PF00563 EAL domain 465 699 1.5E-69 T 14-10-2018 IPR001633 EAL domain Atu4692 ccded5e82faab4b270386667aaae5ba9 724 Pfam PF00990 Diguanylate cyclase, GGDEF domain 290 444 3.2E-45 T 14-10-2018 IPR000160 GGDEF domain Atu4692 ccded5e82faab4b270386667aaae5ba9 724 SMART SM00267 279 449 1.2E-56 T 14-10-2018 IPR000160 GGDEF domain Atu0114 831a7070e988308c20e03793c1df022b 448 SUPERFAMILY SSF52172 1 189 3.7E-42 T 14-10-2018 IPR011006 CheY-like superfamily Atu0114 831a7070e988308c20e03793c1df022b 448 Gene3D G3DSA:3.40.50.300 136 315 1.6E-55 T 14-10-2018 Atu0114 831a7070e988308c20e03793c1df022b 448 Pfam PF00072 Response regulator receiver domain 6 114 5.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0114 831a7070e988308c20e03793c1df022b 448 SMART SM00382 165 308 2.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0114 831a7070e988308c20e03793c1df022b 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atu0114 831a7070e988308c20e03793c1df022b 448 Pfam PF02954 Bacterial regulatory protein, Fis family 401 439 9.7E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu0114 831a7070e988308c20e03793c1df022b 448 Pfam PF00158 Sigma-54 interaction domain 147 311 2.3E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atu0114 831a7070e988308c20e03793c1df022b 448 Gene3D G3DSA:1.10.10.60 391 443 2.4E-11 T 14-10-2018 Atu0114 831a7070e988308c20e03793c1df022b 448 Gene3D G3DSA:3.40.50.2300 2 135 3.4E-35 T 14-10-2018 Atu0114 831a7070e988308c20e03793c1df022b 448 Gene3D G3DSA:1.10.8.60 316 389 5.7E-13 T 14-10-2018 Atu0114 831a7070e988308c20e03793c1df022b 448 SUPERFAMILY SSF52540 147 380 3.01E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0114 831a7070e988308c20e03793c1df022b 448 SMART SM00448 4 115 2.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0114 831a7070e988308c20e03793c1df022b 448 SUPERFAMILY SSF46689 388 441 1.02E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 Gene3D G3DSA:3.50.50.60 9 535 3.3E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 86 109 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 Pfam PF00732 GMC oxidoreductase 9 299 3.2E-75 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 PIRSF PIRSF000137 1 541 5.4E-137 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 258 272 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 SUPERFAMILY SSF51905 7 538 8.42E-77 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 SUPERFAMILY SSF54373 294 481 9.81E-37 T 14-10-2018 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 Gene3D G3DSA:3.30.560.10 47 476 3.3E-156 T 14-10-2018 Atu6063 54fbe77af3c4b5d72c563c777658c16e 541 Pfam PF05199 GMC oxidoreductase 395 530 1.8E-33 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Atu1776 6f1ed96bf72e25a993283641a3a83193 267 SUPERFAMILY SSF103481 152 240 1.96E-14 T 14-10-2018 Atu1776 6f1ed96bf72e25a993283641a3a83193 267 Pfam PF00892 EamA-like transporter family 108 236 2.4E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1776 6f1ed96bf72e25a993283641a3a83193 267 Pfam PF00892 EamA-like transporter family 29 97 5.3E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1776 6f1ed96bf72e25a993283641a3a83193 267 SUPERFAMILY SSF103481 17 102 8.11E-12 T 14-10-2018 Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 Gene3D G3DSA:3.40.50.720 138 306 7.9E-96 T 14-10-2018 Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 Gene3D G3DSA:3.90.180.10 13 335 7.9E-96 T 14-10-2018 Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 99 1.9E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 Pfam PF13602 Zinc-binding dehydrogenase 214 335 1.5E-23 T 14-10-2018 Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 SUPERFAMILY SSF50129 3 156 9.74E-39 T 14-10-2018 IPR011032 GroES-like superfamily Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 SMART SM00829 14 335 8.7E-15 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 SUPERFAMILY SSF51735 130 264 2.47E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5324 45f8d6fc973d80bb554b43bcbbe5effc 338 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 172 193 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Atu0207 770f18ba2ac9880ab7f356f58c77564f 293 Gene3D G3DSA:3.40.190.290 90 284 6.1E-35 T 14-10-2018 Atu0207 770f18ba2ac9880ab7f356f58c77564f 293 SUPERFAMILY SSF46785 1 111 9.87E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0207 770f18ba2ac9880ab7f356f58c77564f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0207 770f18ba2ac9880ab7f356f58c77564f 293 Pfam PF03466 LysR substrate binding domain 89 284 1.2E-33 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0207 770f18ba2ac9880ab7f356f58c77564f 293 SUPERFAMILY SSF53850 89 288 4.71E-36 T 14-10-2018 Atu0207 770f18ba2ac9880ab7f356f58c77564f 293 Gene3D G3DSA:1.10.10.10 1 84 8.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2097 d0638738b3941bd713b44b5db1230fc3 366 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 364 24.15 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2097 d0638738b3941bd713b44b5db1230fc3 366 ProSitePatterns PS01348 MraY family signature 2. 195 206 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2097 d0638738b3941bd713b44b5db1230fc3 366 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 366 1.5E-118 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2097 d0638738b3941bd713b44b5db1230fc3 366 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2097 d0638738b3941bd713b44b5db1230fc3 366 Pfam PF00953 Glycosyl transferase family 4 99 289 7.1E-33 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Atu2097 d0638738b3941bd713b44b5db1230fc3 366 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.8E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu4312 21e1914af698bc2640e92217db07dde3 996 SUPERFAMILY SSF103025 609 895 2.83E-90 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 Gene3D G3DSA:1.10.10.1100 503 581 4.0E-94 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 Gene3D G3DSA:3.50.50.60 293 418 4.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4312 21e1914af698bc2640e92217db07dde3 996 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 171 437 1.3E-14 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu4312 21e1914af698bc2640e92217db07dde3 996 Gene3D G3DSA:3.50.50.60 171 588 4.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4312 21e1914af698bc2640e92217db07dde3 996 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 886 982 4.0E-16 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu4312 21e1914af698bc2640e92217db07dde3 996 PIRSF PIRSF037980 1 996 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4312 21e1914af698bc2640e92217db07dde3 996 SUPERFAMILY SSF101790 899 994 3.11E-21 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atu4312 21e1914af698bc2640e92217db07dde3 996 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 101 2.2E-24 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 Pfam PF01571 Aminomethyltransferase folate-binding domain 615 879 1.3E-69 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu4312 21e1914af698bc2640e92217db07dde3 996 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 410 426 3.7E-7 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 191 3.7E-7 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 299 3.7E-7 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 3 995 0.0 T 14-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4312 21e1914af698bc2640e92217db07dde3 996 Gene3D G3DSA:3.10.20.440 11 104 2.9E-7 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 666 681 2.6E-8 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 475 489 2.6E-8 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 193 2.6E-8 T 14-10-2018 Atu4312 21e1914af698bc2640e92217db07dde3 996 SUPERFAMILY SSF51905 146 479 1.53E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4312 21e1914af698bc2640e92217db07dde3 996 Gene3D G3DSA:3.30.1360.120 602 987 1.9E-94 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 Pfam PF00664 ABC transporter transmembrane region 34 283 8.8E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 Pfam PF00005 ABC transporter 356 501 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 SUPERFAMILY SSF52540 327 561 7.35E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 Gene3D G3DSA:1.20.1560.10 15 321 2.3E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 SMART SM00382 362 549 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 SUPERFAMILY SSF90123 20 321 4.05E-46 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 Gene3D G3DSA:3.40.50.300 323 570 3.5E-66 T 14-10-2018 Atu3383 cd178e56022ce90fb2ec48153a70b75c 615 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 20 563 6.3E-250 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Atu1580 941778773db71661784ebab981ab4548 257 Gene3D G3DSA:3.40.50.300 15 257 6.9E-79 T 14-10-2018 Atu1580 941778773db71661784ebab981ab4548 257 Pfam PF00005 ABC transporter 33 181 2.6E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1580 941778773db71661784ebab981ab4548 257 PIRSF PIRSF039085 14 257 1.6E-109 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu1580 941778773db71661784ebab981ab4548 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1580 941778773db71661784ebab981ab4548 257 SUPERFAMILY SSF52540 18 251 2.28E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1580 941778773db71661784ebab981ab4548 257 SMART SM00382 42 229 1.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0193 c6cfb20b07d90c5d208c723c7f549243 452 SUPERFAMILY SSF54368 6 114 5.89E-11 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0193 c6cfb20b07d90c5d208c723c7f549243 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 252 267 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu0193 c6cfb20b07d90c5d208c723c7f549243 452 SMART SM01230 114 370 7.9E-99 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0193 c6cfb20b07d90c5d208c723c7f549243 452 SUPERFAMILY SSF55931 115 449 4.81E-98 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu0193 c6cfb20b07d90c5d208c723c7f549243 452 Gene3D G3DSA:3.30.590.10 117 451 4.3E-96 T 14-10-2018 Atu0193 c6cfb20b07d90c5d208c723c7f549243 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 448 2.1E-98 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu3259 76c951d53000900bb9231f8437a36d41 503 Pfam PF00171 Aldehyde dehydrogenase family 26 326 1.8E-43 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu3259 76c951d53000900bb9231f8437a36d41 503 Gene3D G3DSA:3.40.605.10 42 503 2.1E-193 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3259 76c951d53000900bb9231f8437a36d41 503 Gene3D G3DSA:3.40.309.10 266 451 2.1E-193 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu3259 76c951d53000900bb9231f8437a36d41 503 SUPERFAMILY SSF53720 25 497 3.4E-100 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 SUPERFAMILY SSF48498 96 188 3.07E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 Gene3D G3DSA:1.10.357.10 17 193 1.0E-37 T 14-10-2018 Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 3.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 SUPERFAMILY SSF46689 11 80 1.74E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 3.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2320 f40ecef3f7a40551f4bdc4d850cf7642 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.3E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3973 7d849fc3daec4225b87105139c0b3d60 236 Pfam PF03737 Aldolase/RraA 15 179 1.0E-29 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Atu3973 7d849fc3daec4225b87105139c0b3d60 236 SUPERFAMILY SSF89562 12 190 8.24E-40 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Atu3973 7d849fc3daec4225b87105139c0b3d60 236 Gene3D G3DSA:3.50.30.100 1 201 4.1E-50 T 14-10-2018 Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 Gene3D G3DSA:2.40.30.170 301 423 4.7E-35 T 14-10-2018 Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 SUPERFAMILY SSF111369 230 367 2.48E-9 T 14-10-2018 Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 Gene3D G3DSA:1.10.287.470 154 255 1.9E-12 T 14-10-2018 Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 119 362 1.2E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 SUPERFAMILY SSF111369 120 179 2.22E-9 T 14-10-2018 Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 Gene3D G3DSA:2.40.50.100 121 153 1.9E-12 T 14-10-2018 Atu4478 8ef9949ffde3ec82bfe390986d22f489 432 Pfam PF00529 HlyD membrane-fusion protein of T1SS 363 413 1.4E-12 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu0071 649dd84b3160d718cc1c78fc8c3f5bc0 324 Pfam PF00268 Ribonucleotide reductase, small chain 14 285 5.7E-86 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0071 649dd84b3160d718cc1c78fc8c3f5bc0 324 PIRSF PIRSF000355 5 321 1.6E-80 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0071 649dd84b3160d718cc1c78fc8c3f5bc0 324 SUPERFAMILY SSF47240 9 324 1.4E-106 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu0071 649dd84b3160d718cc1c78fc8c3f5bc0 324 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 102 118 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu0071 649dd84b3160d718cc1c78fc8c3f5bc0 324 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 12 324 1.4E-144 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu0071 649dd84b3160d718cc1c78fc8c3f5bc0 324 Gene3D G3DSA:1.10.620.20 2 296 8.1E-112 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 Pfam PF00005 ABC transporter 24 171 4.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 SMART SM00382 32 220 8.9E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 SUPERFAMILY SSF52540 1 241 1.43E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 Gene3D G3DSA:3.30.70.260 235 345 1.5E-22 T 14-10-2018 Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 SMART SM00930 267 342 1.4E-17 T 14-10-2018 IPR018449 NIL domain Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 Gene3D G3DSA:3.40.50.300 1 234 2.4E-70 T 14-10-2018 Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 SUPERFAMILY SSF55021 250 345 4.58E-19 T 14-10-2018 Atu4487 3d9502a78d84f3052bfb577cc03c4342 346 Pfam PF09383 NIL domain 270 341 4.5E-17 T 14-10-2018 IPR018449 NIL domain Atu5460 dfa907dc42bc6855a01744200a0259b7 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 299 3.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5460 dfa907dc42bc6855a01744200a0259b7 308 SUPERFAMILY SSF161098 69 297 1.96E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu5460 dfa907dc42bc6855a01744200a0259b7 308 Gene3D G3DSA:1.10.3720.10 67 306 9.5E-65 T 14-10-2018 IPR035906 MetI-like superfamily Atu3878 1c9e4cf2f3b0b9c66a6c8b4a27d9296f 311 Gene3D G3DSA:3.40.50.1360 44 304 3.2E-71 T 14-10-2018 Atu3878 1c9e4cf2f3b0b9c66a6c8b4a27d9296f 311 SUPERFAMILY SSF100950 53 304 3.53E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu3878 1c9e4cf2f3b0b9c66a6c8b4a27d9296f 311 Pfam PF04198 Putative sugar-binding domain 49 304 3.8E-62 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Atu3878 1c9e4cf2f3b0b9c66a6c8b4a27d9296f 311 Gene3D G3DSA:1.10.10.10 1 43 1.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3878 1c9e4cf2f3b0b9c66a6c8b4a27d9296f 311 SUPERFAMILY SSF88659 3 38 9.48E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 SUPERFAMILY SSF46785 12 145 2.12E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 SMART SM00347 33 131 9.2E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 3.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 3.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 3.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 Pfam PF01047 MarR family 40 98 7.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5273 aeb959b312cdc9619338e8e27b9c0ae1 147 Gene3D G3DSA:1.10.10.10 5 146 3.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1131 cc0bad36193b65f834158de4331565f7 218 Pfam PF13505 Outer membrane protein beta-barrel domain 39 218 2.8E-20 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel Atu1131 cc0bad36193b65f834158de4331565f7 218 SUPERFAMILY SSF56925 45 218 3.18E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu1131 cc0bad36193b65f834158de4331565f7 218 Gene3D G3DSA:2.40.160.20 45 218 5.1E-21 T 14-10-2018 Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 SUPERFAMILY SSF50331 237 349 7.37E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 SMART SM00382 28 211 3.5E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 Pfam PF08402 TOBE domain 275 349 3.0E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 Gene3D G3DSA:2.40.50.940 218 348 8.3E-14 T 14-10-2018 Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 Gene3D G3DSA:3.40.50.300 2 214 9.1E-69 T 14-10-2018 Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 Pfam PF00005 ABC transporter 20 161 5.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 SUPERFAMILY SSF52540 4 243 1.22E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 Gene3D G3DSA:2.40.50.140 282 342 8.3E-14 T 14-10-2018 Atu2150 f5bf982b29d018aafbf6b7a869ef7272 352 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0974 db11e3d9cd645600fc412d7b0143a0d5 165 Pfam PF03100 CcmE 3 130 5.3E-42 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Atu0974 db11e3d9cd645600fc412d7b0143a0d5 165 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 31.006 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Atu0974 db11e3d9cd645600fc412d7b0143a0d5 165 SUPERFAMILY SSF82093 29 136 2.22E-35 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Atu0974 db11e3d9cd645600fc412d7b0143a0d5 165 Gene3D G3DSA:2.40.50.140 30 136 9.9E-37 T 14-10-2018 Atu6039 4d734ddb70945c9f98d6bdaf609c88e8 99 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 8 96 5.0E-44 T 14-10-2018 Atu6039 4d734ddb70945c9f98d6bdaf609c88e8 99 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 10 94 2.3E-19 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Atu6039 4d734ddb70945c9f98d6bdaf609c88e8 99 PIRSF PIRSF017854 3 94 3.9E-37 T 14-10-2018 IPR016704 Conjugal transfer, TrbD Atu2157 50feff024ea06c47e127e77a5e033975 186 Pfam PF13350 Tyrosine phosphatase family 33 157 5.0E-10 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Atu2157 50feff024ea06c47e127e77a5e033975 186 SUPERFAMILY SSF52799 34 175 7.07E-21 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu2157 50feff024ea06c47e127e77a5e033975 186 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 124 134 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Atu2157 50feff024ea06c47e127e77a5e033975 186 Gene3D G3DSA:3.90.190.10 30 163 6.0E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu0678 2dd13bbd3c0427bc645b80040664b9af 375 Pfam PF13393 Histidyl-tRNA synthetase 12 191 3.8E-20 T 14-10-2018 Atu0678 2dd13bbd3c0427bc645b80040664b9af 375 Pfam PF13393 Histidyl-tRNA synthetase 239 366 2.1E-14 T 14-10-2018 Atu0678 2dd13bbd3c0427bc645b80040664b9af 375 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 1 360 29.483 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Atu0678 2dd13bbd3c0427bc645b80040664b9af 375 SUPERFAMILY SSF55681 13 369 7.07E-47 T 14-10-2018 Atu0678 2dd13bbd3c0427bc645b80040664b9af 375 PIRSF PIRSF001549 207 374 3.3E-20 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Atu0678 2dd13bbd3c0427bc645b80040664b9af 375 PIRSF PIRSF001549 21 177 2.7E-14 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Gene3D G3DSA:3.40.50.2300 602 732 9.1E-38 T 14-10-2018 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Pfam PF00072 Response regulator receiver domain 609 716 1.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Pfam PF00072 Response regulator receiver domain 466 578 5.7E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 437 6.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Gene3D G3DSA:1.10.287.130 209 286 2.7E-14 T 14-10-2018 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Gene3D G3DSA:1.10.10.10 734 800 3.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SMART SM00448 464 578 4.9E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SMART SM00448 605 716 2.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 743 757 9.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 757 773 9.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 773 785 9.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 284 1.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Gene3D G3DSA:3.30.450.20 76 208 1.6E-10 T 14-10-2018 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 ProSitePatterns PS00622 LuxR-type HTH domain signature. 757 784 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SMART SM00421 740 797 6.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SUPERFAMILY SSF47384 207 284 2.55E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Pfam PF13596 PAS domain 92 196 2.1E-20 T 14-10-2018 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Gene3D G3DSA:3.30.565.10 297 440 4.5E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SMART SM00387 328 439 3.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Pfam PF00196 Bacterial regulatory proteins, luxR family 742 796 1.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SUPERFAMILY SSF55785 77 197 3.84E-6 T 14-10-2018 IPR035965 PAS domain superfamily Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SUPERFAMILY SSF52172 463 584 1.11E-21 T 14-10-2018 IPR011006 CheY-like superfamily Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SMART SM00388 219 284 1.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 Gene3D G3DSA:3.40.50.2300 455 600 5.5E-22 T 14-10-2018 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SUPERFAMILY SSF52172 605 755 8.54E-31 T 14-10-2018 IPR011006 CheY-like superfamily Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SUPERFAMILY SSF46894 738 798 4.25E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4805 e2af07389a46e43cdd5cdff24da933ca 802 SUPERFAMILY SSF55874 273 435 4.71E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0360 1aad3c074e76798db5a744b4385009f1 529 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 76 473 5.3E-105 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atu0360 1aad3c074e76798db5a744b4385009f1 529 Pfam PF00795 Carbon-nitrogen hydrolase 239 489 9.4E-33 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu0360 1aad3c074e76798db5a744b4385009f1 529 SUPERFAMILY SSF56317 233 490 4.45E-45 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu0360 1aad3c074e76798db5a744b4385009f1 529 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 516 21.331 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Atu0360 1aad3c074e76798db5a744b4385009f1 529 Gene3D G3DSA:3.60.110.10 230 499 1.2E-21 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu3433 60de97cc0df7b4aed5a8d8d91e49da50 535 PIRSF PIRSF002741 4 533 3.2E-141 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3433 60de97cc0df7b4aed5a8d8d91e49da50 535 SUPERFAMILY SSF53850 34 522 5.79E-132 T 14-10-2018 Atu3433 60de97cc0df7b4aed5a8d8d91e49da50 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 444 1.2E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3433 60de97cc0df7b4aed5a8d8d91e49da50 535 Gene3D G3DSA:3.10.105.10 286 500 1.1E-52 T 14-10-2018 Atu3433 60de97cc0df7b4aed5a8d8d91e49da50 535 Gene3D G3DSA:3.40.190.10 24 285 9.3E-71 T 14-10-2018 Atu3823 9ec2745d70f56fa42364433160c5f5ac 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 328 7.5E-38 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Atu3823 9ec2745d70f56fa42364433160c5f5ac 342 PIRSF PIRSF005632 1 342 1.4E-198 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit Atu3823 9ec2745d70f56fa42364433160c5f5ac 342 SUPERFAMILY SSF51726 7 340 4.06E-68 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atu3823 9ec2745d70f56fa42364433160c5f5ac 342 Gene3D G3DSA:3.20.20.210 1 342 2.2E-134 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atu0328 d50503d15c3543f96067cb228b2dec51 363 SUPERFAMILY SSF55781 85 357 9.81E-52 T 14-10-2018 Atu0328 d50503d15c3543f96067cb228b2dec51 363 SUPERFAMILY SSF46785 15 95 3.2E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0328 d50503d15c3543f96067cb228b2dec51 363 Gene3D G3DSA:3.30.450.40 121 353 8.0E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu0328 d50503d15c3543f96067cb228b2dec51 363 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 16 358 1.9E-105 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Atu0328 d50503d15c3543f96067cb228b2dec51 363 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 14 352 28.884 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Atu0328 d50503d15c3543f96067cb228b2dec51 363 Pfam PF01628 HrcA protein C terminal domain 121 345 1.8E-51 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Atu0328 d50503d15c3543f96067cb228b2dec51 363 Gene3D G3DSA:1.10.10.10 5 97 3.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0328 d50503d15c3543f96067cb228b2dec51 363 PIRSF PIRSF005485 12 363 1.8E-99 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Atu0328 d50503d15c3543f96067cb228b2dec51 363 Gene3D G3DSA:3.30.390.60 144 248 8.0E-32 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Atu5315 b14a98dbaa3d1d778238cf1202dc31ba 327 Pfam PF01032 FecCD transport family 18 323 5.2E-77 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu5315 b14a98dbaa3d1d778238cf1202dc31ba 327 Gene3D G3DSA:1.10.3470.10 5 327 1.8E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu5315 b14a98dbaa3d1d778238cf1202dc31ba 327 SUPERFAMILY SSF81345 4 323 4.45E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu5230 e14490822f72803144df8351dca00255 601 SUPERFAMILY SSF55781 25 174 8.94E-13 T 14-10-2018 Atu5230 e14490822f72803144df8351dca00255 601 Gene3D G3DSA:3.30.450.40 2 177 3.6E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu5230 e14490822f72803144df8351dca00255 601 Pfam PF13556 PucR C-terminal helix-turn-helix domain 531 589 4.2E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Atu5230 e14490822f72803144df8351dca00255 601 Pfam PF13185 GAF domain 25 164 9.2E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu5230 e14490822f72803144df8351dca00255 601 Gene3D G3DSA:1.10.10.2840 466 595 8.3E-20 T 14-10-2018 Atu5230 e14490822f72803144df8351dca00255 601 SMART SM00065 22 173 0.005 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu4575 a8271dda7443b91a805433811f29f9d8 321 SUPERFAMILY SSF51215 39 189 3.01E-5 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu4575 a8271dda7443b91a805433811f29f9d8 321 Gene3D G3DSA:1.10.10.60 206 314 1.0E-22 T 14-10-2018 Atu4575 a8271dda7443b91a805433811f29f9d8 321 SUPERFAMILY SSF46689 211 258 3.76E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4575 a8271dda7443b91a805433811f29f9d8 321 SUPERFAMILY SSF46689 261 309 2.42E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4575 a8271dda7443b91a805433811f29f9d8 321 Pfam PF12852 Cupin 15 190 3.7E-32 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Atu4575 a8271dda7443b91a805433811f29f9d8 321 SMART SM00342 225 308 1.2E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4575 a8271dda7443b91a805433811f29f9d8 321 Pfam PF12833 Helix-turn-helix domain 231 309 1.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3328 78841479facea699ec660d163f147e11 182 Pfam PF07883 Cupin domain 109 176 1.2E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu3328 78841479facea699ec660d163f147e11 182 SMART SM00530 8 63 7.2E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu3328 78841479facea699ec660d163f147e11 182 SUPERFAMILY SSF47413 3 69 3.66E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3328 78841479facea699ec660d163f147e11 182 Gene3D G3DSA:2.60.120.10 68 181 1.7E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3328 78841479facea699ec660d163f147e11 182 Pfam PF13560 Helix-turn-helix domain 4 55 5.5E-13 T 14-10-2018 Atu3328 78841479facea699ec660d163f147e11 182 Gene3D G3DSA:1.10.260.40 2 67 6.7E-16 T 14-10-2018 Atu3328 78841479facea699ec660d163f147e11 182 SUPERFAMILY SSF51182 60 182 2.72E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 PIRSF PIRSF036427 9 249 7.5E-65 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 11 243 1.8E-67 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 Gene3D G3DSA:3.40.1010.10 10 142 9.9E-30 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 225 9.3E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 SUPERFAMILY SSF53790 7 247 1.31E-43 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu2801 115ec7d9afa5db59e4faf505bbc31cc9 255 Gene3D G3DSA:3.30.950.10 144 247 2.2E-14 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu5502 0e0daa14699f187bae03a8765b731d04 251 SUPERFAMILY SSF52317 58 217 4.3E-13 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5502 0e0daa14699f187bae03a8765b731d04 251 Pfam PF09825 Biotin-protein ligase, N terminal 32 129 5.0E-9 T 14-10-2018 IPR019197 Biotin-protein ligase, N-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu5502 0e0daa14699f187bae03a8765b731d04 251 PIRSF PIRSF016642 6 251 5.7E-88 T 14-10-2018 IPR015834 Uncharacterised conserved protein UCP016642 Atu5502 0e0daa14699f187bae03a8765b731d04 251 Gene3D G3DSA:3.40.50.880 47 227 9.1E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1336 a8fcd21180a5b7f9848b763a7ccf96ef 108 Pfam PF07978 NIPSNAP 5 100 2.5E-29 T 14-10-2018 IPR012577 NIPSNAP Atu1336 a8fcd21180a5b7f9848b763a7ccf96ef 108 SUPERFAMILY SSF54909 1 100 1.19E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0116 123ca50288265857a2f0be29df9a1cd8 136 Gene3D G3DSA:3.40.190.10 2 58 4.8E-36 T 14-10-2018 Atu0116 123ca50288265857a2f0be29df9a1cd8 136 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 1 131 6.3E-27 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu0116 123ca50288265857a2f0be29df9a1cd8 136 Gene3D G3DSA:3.40.190.150 59 129 4.8E-36 T 14-10-2018 Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 Gene3D G3DSA:3.40.50.720 180 342 1.0E-133 T 14-10-2018 Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 Pfam PF00107 Zinc-binding dehydrogenase 199 268 4.6E-9 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 146 2.9E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 5 392 1.3E-216 T 14-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 SUPERFAMILY SSF51735 164 354 3.52E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 SUPERFAMILY SSF50129 6 189 6.18E-61 T 14-10-2018 IPR011032 GroES-like superfamily Atu1567 a3bdd81fea27300a67c18fb1002586e4 398 Gene3D G3DSA:3.90.180.10 14 379 1.0E-133 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 391 2.5E-118 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 Gene3D G3DSA:2.40.30.10 190 339 7.0E-131 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 Pfam PF03486 HI0933-like protein 7 392 2.0E-144 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 2.1E-9 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 2.1E-9 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-9 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 Gene3D G3DSA:1.10.8.260 263 322 7.0E-131 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 SUPERFAMILY SSF160996 191 340 8.76E-38 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 2.7E-8 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 2.7E-8 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.7E-8 T 14-10-2018 Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 Gene3D G3DSA:3.50.50.60 8 391 7.0E-131 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0603 ca4af2d7e35f33e683113cbdf482394d 394 SUPERFAMILY SSF51905 2 393 3.67E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 Gene3D G3DSA:3.40.50.2300 139 366 7.0E-115 T 14-10-2018 Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 SUPERFAMILY SSF53822 22 370 4.19E-76 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 Gene3D G3DSA:3.40.50.2300 23 355 7.0E-115 T 14-10-2018 Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 1.2E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 23 39 1.2E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 1.2E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 85 95 1.2E-7 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu4519 a70b2d2dca8b5320a3d2331fe4ca1bda 390 Pfam PF13458 Periplasmic binding protein 22 363 6.5E-64 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu4326 0f20b517141199adcc21c97ff8cc4236 497 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 323 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu4326 0f20b517141199adcc21c97ff8cc4236 497 Pfam PF00083 Sugar (and other) transporter 18 438 1.0E-62 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu4326 0f20b517141199adcc21c97ff8cc4236 497 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 24 422 1.2E-137 T 14-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 Atu4326 0f20b517141199adcc21c97ff8cc4236 497 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu4326 0f20b517141199adcc21c97ff8cc4236 497 Gene3D G3DSA:1.20.1250.20 15 451 4.2E-73 T 14-10-2018 Atu4326 0f20b517141199adcc21c97ff8cc4236 497 SUPERFAMILY SSF103473 13 437 1.57E-71 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4326 0f20b517141199adcc21c97ff8cc4236 497 Pfam PF08946 Osmosensory transporter coiled coil 445 496 3.2E-18 T 14-10-2018 IPR015041 Osmosensory transporter coiled coil Atu4848 2063eebae4ac6686e858f77dd8d18839 319 Pfam PF01791 DeoC/LacD family aldolase 53 267 1.3E-23 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu4848 2063eebae4ac6686e858f77dd8d18839 319 SUPERFAMILY SSF51569 45 302 6.59E-74 T 14-10-2018 Atu4848 2063eebae4ac6686e858f77dd8d18839 319 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 55 280 4.8E-45 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu4848 2063eebae4ac6686e858f77dd8d18839 319 Gene3D G3DSA:3.20.20.70 43 304 2.0E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4848 2063eebae4ac6686e858f77dd8d18839 319 SMART SM01133 52 300 1.2E-74 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu4848 2063eebae4ac6686e858f77dd8d18839 319 PIRSF PIRSF001357 46 309 1.1E-72 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 26 113 2.1E-25 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 PIRSF PIRSF006250 8 284 2.0E-97 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 SUPERFAMILY SSF54675 3 114 4.32E-33 T 14-10-2018 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 Gene3D G3DSA:3.90.1170.20 17 280 2.1E-103 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 Gene3D G3DSA:3.20.20.70 118 271 2.1E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 SUPERFAMILY SSF51690 115 281 3.49E-59 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 280 1.8E-60 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Atu4096 d57e7c16b3b8060efd086ac69199cefc 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 281 2.9E-100 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Atu2149 8852e1b782ae2405904aad4bb997414b 260 Gene3D G3DSA:1.10.3720.10 3 255 3.9E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu2149 8852e1b782ae2405904aad4bb997414b 260 SUPERFAMILY SSF161098 2 251 2.75E-34 T 14-10-2018 IPR035906 MetI-like superfamily Atu2149 8852e1b782ae2405904aad4bb997414b 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 227 1.7E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0332 670401475caddf05c12776aa8fefddda 514 Pfam PF04963 Sigma-54 factor, core binding domain 141 328 1.4E-50 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Atu0332 670401475caddf05c12776aa8fefddda 514 Gene3D G3DSA:1.10.10.60 444 502 3.8E-21 T 14-10-2018 Atu0332 670401475caddf05c12776aa8fefddda 514 PIRSF PIRSF000774 1 505 8.4E-140 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 51 6.9E-16 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 483 490 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 Gene3D G3DSA:1.10.10.1330 146 269 2.4E-21 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Atu0332 670401475caddf05c12776aa8fefddda 514 PRINTS PR00045 Sigma-54 factor signature 419 430 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 PRINTS PR00045 Sigma-54 factor signature 214 231 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 PRINTS PR00045 Sigma-54 factor signature 403 415 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 PRINTS PR00045 Sigma-54 factor signature 478 496 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 502 6.9E-125 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 391 410 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Atu0332 670401475caddf05c12776aa8fefddda 514 Pfam PF04552 Sigma-54, DNA binding domain 344 503 4.3E-70 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 PIRSF PIRSF039089 1 292 1.5E-107 T 14-10-2018 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 292 34.023 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 SUPERFAMILY SSF52943 3 292 8.11E-89 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 Pfam PF00231 ATP synthase 3 292 3.3E-93 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 Gene3D G3DSA:3.40.1380.10 27 251 2.9E-91 T 14-10-2018 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 278 291 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 Gene3D G3DSA:1.10.287.80 5 291 2.9E-91 T 14-10-2018 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.6E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 PRINTS PR00126 ATP synthase gamma subunit signature 270 291 1.6E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 1.6E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 PRINTS PR00126 ATP synthase gamma subunit signature 239 258 1.6E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2623 afbd9a7eb9689a328d0deabf50804ad7 292 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 292 5.2E-100 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0907 1b5f9c214fa12283b75e089a7286ee06 165 Gene3D G3DSA:3.40.630.30 1 165 9.0E-57 T 14-10-2018 Atu0907 1b5f9c214fa12283b75e089a7286ee06 165 SUPERFAMILY SSF55729 3 164 7.72E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0907 1b5f9c214fa12283b75e089a7286ee06 165 Pfam PF13420 Acetyltransferase (GNAT) domain 5 156 3.2E-25 T 14-10-2018 Atu0179 079aa1734c4cbc04f1d2ff956075cc59 369 PIRSF PIRSF007313 1 362 2.5E-159 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Atu0179 079aa1734c4cbc04f1d2ff956075cc59 369 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 351 7.6E-163 T 14-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Atu3256 8bdb39658200e9443de764c9d20ddb65 348 SUPERFAMILY SSF50129 4 180 1.05E-46 T 14-10-2018 IPR011032 GroES-like superfamily Atu3256 8bdb39658200e9443de764c9d20ddb65 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu3256 8bdb39658200e9443de764c9d20ddb65 348 Pfam PF00107 Zinc-binding dehydrogenase 181 299 7.2E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu3256 8bdb39658200e9443de764c9d20ddb65 348 SMART SM00829 10 343 7.2E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu3256 8bdb39658200e9443de764c9d20ddb65 348 SUPERFAMILY SSF51735 146 311 1.5E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3256 8bdb39658200e9443de764c9d20ddb65 348 Gene3D G3DSA:3.90.180.10 12 331 2.3E-98 T 14-10-2018 Atu3256 8bdb39658200e9443de764c9d20ddb65 348 Gene3D G3DSA:3.40.50.720 158 292 2.3E-98 T 14-10-2018 Atu3256 8bdb39658200e9443de764c9d20ddb65 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 1.3E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu2576 df4d0cd322f8babd0ff15a4b0b8b169f 619 SUPERFAMILY SSF53474 324 598 1.38E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2576 df4d0cd322f8babd0ff15a4b0b8b169f 619 Pfam PF12146 Serine aminopeptidase, S33 75 187 7.7E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu2576 df4d0cd322f8babd0ff15a4b0b8b169f 619 Gene3D G3DSA:3.40.50.1820 50 239 4.3E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2576 df4d0cd322f8babd0ff15a4b0b8b169f 619 Gene3D G3DSA:3.40.50.1820 324 611 2.6E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2576 df4d0cd322f8babd0ff15a4b0b8b169f 619 Pfam PF12697 Alpha/beta hydrolase family 351 592 1.3E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2576 df4d0cd322f8babd0ff15a4b0b8b169f 619 SUPERFAMILY SSF53474 55 229 2.24E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3229 ba7601e463e1f13d5f35347a8dbf5fd7 472 Gene3D G3DSA:3.30.70.270 44 143 8.2E-7 T 14-10-2018 Atu3229 ba7601e463e1f13d5f35347a8dbf5fd7 472 Gene3D G3DSA:1.10.150.20 144 189 8.2E-7 T 14-10-2018 Atu3229 ba7601e463e1f13d5f35347a8dbf5fd7 472 Pfam PF00817 impB/mucB/samB family 6 112 4.5E-5 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu3229 ba7601e463e1f13d5f35347a8dbf5fd7 472 SUPERFAMILY SSF56672 4 201 8.34E-34 T 14-10-2018 Atu3229 ba7601e463e1f13d5f35347a8dbf5fd7 472 Gene3D G3DSA:2.30.40.20 8 43 8.2E-7 T 14-10-2018 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 16 228 7.6E-67 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 Pfam PF14622 Ribonuclease-III-like 29 148 2.0E-26 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 SUPERFAMILY SSF69065 11 165 1.18E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 Gene3D G3DSA:3.30.160.20 161 229 3.5E-17 T 14-10-2018 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 Hamap MF_00104 Ribonuclease 3 [rnc]. 15 226 25.209 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 SMART SM00535 27 158 1.8E-38 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 ProSitePatterns PS00517 Ribonuclease III family signature. 47 55 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 Gene3D G3DSA:1.10.1520.10 11 152 2.0E-39 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 SMART SM00358 163 230 4.0E-19 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 Pfam PF00035 Double-stranded RNA binding motif 163 227 7.7E-12 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Atu1035 09d38eba6c810a802e3e21f6cb46d835 239 SUPERFAMILY SSF54768 119 236 2.81E-23 T 14-10-2018 Atu6010 8a0bc453d40e37ce555432bea3556047 467 SUPERFAMILY SSF75304 6 457 6.54E-106 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu6010 8a0bc453d40e37ce555432bea3556047 467 Pfam PF01425 Amidase 23 447 4.5E-108 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu6010 8a0bc453d40e37ce555432bea3556047 467 ProSitePatterns PS00571 Amidases signature. 147 178 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Atu6010 8a0bc453d40e37ce555432bea3556047 467 Gene3D G3DSA:3.90.1300.10 6 458 1.5E-105 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu1919 fc744eefc6b967ea672455fd808460b3 313 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 313 54.431 T 14-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 Atu1919 fc744eefc6b967ea672455fd808460b3 313 Pfam PF00174 Oxidoreductase molybdopterin binding domain 90 247 5.3E-30 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Atu1919 fc744eefc6b967ea672455fd808460b3 313 Gene3D G3DSA:3.90.420.10 49 313 1.7E-108 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Atu1919 fc744eefc6b967ea672455fd808460b3 313 SUPERFAMILY SSF56524 58 309 2.62E-89 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Atu1385 7800029f99078479a215e372edee86b1 267 Pfam PF06230 Protein of unknown function (DUF1009) 36 250 1.2E-66 T 14-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 Atu1385 7800029f99078479a215e372edee86b1 267 Gene3D G3DSA:3.40.50.20 1 108 4.8E-17 T 14-10-2018 Atu1385 7800029f99078479a215e372edee86b1 267 Gene3D G3DSA:3.40.140.80 110 256 4.0E-52 T 14-10-2018 Atu1345 6f44a2eaa2c461dd567a749bcfbae777 257 Gene3D G3DSA:3.40.50.10330 8 102 6.0E-10 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Atu1345 6f44a2eaa2c461dd567a749bcfbae777 257 SUPERFAMILY SSF111331 22 242 3.27E-54 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Atu1345 6f44a2eaa2c461dd567a749bcfbae777 257 Gene3D G3DSA:2.60.200.30 103 250 1.7E-25 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Atu1345 6f44a2eaa2c461dd567a749bcfbae777 257 Hamap MF_00361 NAD kinase [nadK]. 6 257 19.347 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Atu1345 6f44a2eaa2c461dd567a749bcfbae777 257 Pfam PF01513 ATP-NAD kinase 35 211 1.3E-15 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Atu4598 06459119c3ee2947b1be7053ab9b8cfb 269 SUPERFAMILY SSF52540 16 243 2.22E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4598 06459119c3ee2947b1be7053ab9b8cfb 269 Pfam PF00005 ABC transporter 34 173 2.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4598 06459119c3ee2947b1be7053ab9b8cfb 269 SMART SM00382 43 224 1.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4598 06459119c3ee2947b1be7053ab9b8cfb 269 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4598 06459119c3ee2947b1be7053ab9b8cfb 269 Gene3D G3DSA:3.40.50.300 15 253 3.4E-61 T 14-10-2018 Atu4166 e0424a275b4b94fdff3ea438a35c9f28 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 326 1.5E-129 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Atu4166 e0424a275b4b94fdff3ea438a35c9f28 328 Gene3D G3DSA:3.90.25.10 175 308 2.1E-128 T 14-10-2018 Atu4166 e0424a275b4b94fdff3ea438a35c9f28 328 Gene3D G3DSA:3.40.50.720 6 254 2.1E-128 T 14-10-2018 Atu4166 e0424a275b4b94fdff3ea438a35c9f28 328 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 315 6.2E-57 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu4166 e0424a275b4b94fdff3ea438a35c9f28 328 SUPERFAMILY SSF51735 2 323 1.52E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 SMART SM00922 145 241 8.2E-26 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 122 8.8E-17 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 97 122 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 Gene3D G3DSA:3.30.390.10 1 114 7.3E-35 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 Pfam PF13378 Enolase C-terminal domain-like 151 368 1.6E-64 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 SUPERFAMILY SSF54826 1 127 2.89E-31 T 14-10-2018 Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 SUPERFAMILY SSF51604 110 376 4.85E-76 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu3139 aa8e1e434b87fd2109dbb4be4053c236 378 Gene3D G3DSA:3.20.20.120 115 378 5.9E-114 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 Gene3D G3DSA:3.40.50.300 1 237 2.7E-79 T 14-10-2018 Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 Pfam PF00005 ABC transporter 19 161 2.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 Gene3D G3DSA:2.40.50.140 272 331 8.6E-8 T 14-10-2018 Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 SUPERFAMILY SSF50331 237 338 7.48E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 SMART SM00382 28 211 8.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 Pfam PF08402 TOBE domain 270 337 1.8E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 SUPERFAMILY SSF52540 4 241 3.31E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4569 0d8f4a2bb8ade5945103b706a741f009 346 Gene3D G3DSA:2.40.50.100 245 338 8.6E-8 T 14-10-2018 Atu1825 6f6033bc6d3971e88f6f090759bbab43 389 Gene3D G3DSA:3.90.1150.10 8 373 1.6E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1825 6f6033bc6d3971e88f6f090759bbab43 389 Gene3D G3DSA:1.10.260.50 18 286 1.6E-107 T 14-10-2018 Atu1825 6f6033bc6d3971e88f6f090759bbab43 389 PIRSF PIRSF005572 5 385 1.1E-107 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Atu1825 6f6033bc6d3971e88f6f090759bbab43 389 SUPERFAMILY SSF53383 6 378 3.2E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1825 6f6033bc6d3971e88f6f090759bbab43 389 Gene3D G3DSA:3.40.640.10 63 242 1.6E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1825 6f6033bc6d3971e88f6f090759bbab43 389 Pfam PF00266 Aminotransferase class-V 8 370 3.7E-54 T 14-10-2018 IPR000192 Aminotransferase class V domain Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 SUPERFAMILY SSF58104 313 594 6.8E-64 T 14-10-2018 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 SMART SM00304 293 345 4.6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 SMART SM00304 212 265 3.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 Pfam PF00672 HAMP domain 213 260 1.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 Gene3D G3DSA:1.10.287.950 293 595 4.7E-78 T 14-10-2018 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 Gene3D G3DSA:1.20.1480.50 171 271 1.8E-13 T 14-10-2018 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 SUPERFAMILY SSF158472 212 260 1.44E-8 T 14-10-2018 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 560 3.2E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu4736 0c480f7f7bea6da537819ecd30bbbd64 647 SMART SM00283 346 593 1.2E-103 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3485 391fa1f124e74db905ff823968b3643d 698 SMART SM01007 25 227 1.3E-32 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 514 525 8.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 568 576 8.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 588 607 8.7E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 438 455 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 562 578 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 588 607 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 514 525 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 609 626 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 656 676 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3485 391fa1f124e74db905ff823968b3643d 698 SUPERFAMILY SSF53639 28 234 3.73E-29 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Atu3485 391fa1f124e74db905ff823968b3643d 698 Gene3D G3DSA:3.40.50.720 417 697 1.5E-71 T 14-10-2018 Atu3485 391fa1f124e74db905ff823968b3643d 698 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 27 221 2.9E-20 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Atu3485 391fa1f124e74db905ff823968b3643d 698 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 444 691 3.2E-51 T 14-10-2018 Atu3485 391fa1f124e74db905ff823968b3643d 698 SUPERFAMILY SSF51735 436 691 6.5E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3485 391fa1f124e74db905ff823968b3643d 698 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 24 698 0.0 T 14-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Atu3485 391fa1f124e74db905ff823968b3643d 698 Gene3D G3DSA:3.40.225.10 24 234 1.2E-48 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Atu8150 9fabe32064c78ac80977fd44eba50747 195 Pfam PF13350 Tyrosine phosphatase family 34 140 3.9E-12 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Atu8150 9fabe32064c78ac80977fd44eba50747 195 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 122 132 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Atu8150 9fabe32064c78ac80977fd44eba50747 195 SUPERFAMILY SSF52799 31 165 2.99E-23 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu8150 9fabe32064c78ac80977fd44eba50747 195 Gene3D G3DSA:3.90.190.10 23 189 5.0E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu2778 80adfc0440ae3046f1e69e78c3c39a3b 194 Gene3D G3DSA:3.40.50.620 6 194 2.1E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu2778 80adfc0440ae3046f1e69e78c3c39a3b 194 SUPERFAMILY SSF52374 6 191 1.85E-43 T 14-10-2018 Atu2778 80adfc0440ae3046f1e69e78c3c39a3b 194 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 8 191 21.679 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atu2778 80adfc0440ae3046f1e69e78c3c39a3b 194 Pfam PF01467 Cytidylyltransferase-like 12 191 2.0E-26 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atu2778 80adfc0440ae3046f1e69e78c3c39a3b 194 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 12 193 3.3E-45 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 Gene3D G3DSA:3.40.630.10 10 358 1.3E-91 T 14-10-2018 Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 SUPERFAMILY SSF55031 173 280 7.03E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 136 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 Pfam PF01546 Peptidase family M20/M25/M40 65 369 2.8E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 SUPERFAMILY SSF53187 3 369 3.71E-56 T 14-10-2018 Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 5 368 4.8E-141 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 Pfam PF07687 Peptidase dimerisation domain 170 280 1.1E-19 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu3398 93419f765cb21d0a8062e8d8c22348a3 374 Gene3D G3DSA:3.30.70.360 173 288 1.3E-91 T 14-10-2018 Atu0253 1261c121b19295dec5bd3f6ed5d99263 262 Gene3D G3DSA:3.40.50.1820 3 261 8.7E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0253 1261c121b19295dec5bd3f6ed5d99263 262 SUPERFAMILY SSF53474 20 258 1.2E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0253 1261c121b19295dec5bd3f6ed5d99263 262 Pfam PF12697 Alpha/beta hydrolase family 53 247 2.1E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 217 1.1E-86 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 PIRSF PIRSF001461 1 224 3.8E-90 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 Gene3D G3DSA:3.20.20.70 1 224 5.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 SUPERFAMILY SSF51366 5 217 2.2E-73 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atu1839 a49e75cf5af3b84d7730981b863fc0f3 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 201 3.4E-82 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Atu0782 3029eefd42d0364b99b9b2852f76d9fb 63 Gene3D G3DSA:1.10.1470.10 4 63 1.9E-11 T 14-10-2018 IPR036629 YjbJ superfamily Atu0782 3029eefd42d0364b99b9b2852f76d9fb 63 SUPERFAMILY SSF69047 5 61 4.05E-15 T 14-10-2018 IPR036629 YjbJ superfamily Atu0782 3029eefd42d0364b99b9b2852f76d9fb 63 Pfam PF05532 CsbD-like 6 57 7.0E-17 T 14-10-2018 IPR008462 CsbD-like domain Atu0404 1602802075b574a08199b03ebe5ef526 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 142 161 2.8E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 475 489 2.8E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 252 270 2.8E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 329 350 2.8E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 489 502 2.8E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 PRINTS PR00662 Glucose-6-phosphate isomerase signature 457 475 2.8E-54 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 Gene3D G3DSA:3.40.50.10490 90 282 1.7E-219 T 14-10-2018 Atu0404 1602802075b574a08199b03ebe5ef526 541 Gene3D G3DSA:3.40.50.10490 22 498 1.7E-219 T 14-10-2018 Atu0404 1602802075b574a08199b03ebe5ef526 541 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 38 516 40.555 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 SUPERFAMILY SSF53697 6 538 3.61E-208 T 14-10-2018 Atu0404 1602802075b574a08199b03ebe5ef526 541 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 256 269 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 489 506 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 Pfam PF00342 Phosphoglucose isomerase 44 533 8.4E-211 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0404 1602802075b574a08199b03ebe5ef526 541 Gene3D G3DSA:1.10.1390.10 499 538 5.5E-18 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu4789 d4388111f31d6500e9cc95f96194625d 356 Gene3D G3DSA:3.90.25.10 194 342 2.9E-158 T 14-10-2018 Atu4789 d4388111f31d6500e9cc95f96194625d 356 Gene3D G3DSA:3.40.50.720 6 328 2.9E-158 T 14-10-2018 Atu4789 d4388111f31d6500e9cc95f96194625d 356 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 347 54.644 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Atu4789 d4388111f31d6500e9cc95f96194625d 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 337 5.0E-149 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu4789 d4388111f31d6500e9cc95f96194625d 356 SUPERFAMILY SSF51735 4 342 4.59E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4789 d4388111f31d6500e9cc95f96194625d 356 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 344 3.9E-173 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Atu0691 b625fc09d3455ef8361f01b83f0bb29d 308 Gene3D G3DSA:3.40.1090.10 121 246 6.4E-17 T 14-10-2018 Atu0691 b625fc09d3455ef8361f01b83f0bb29d 308 Gene3D G3DSA:3.40.1090.10 21 104 4.2E-17 T 14-10-2018 Atu0691 b625fc09d3455ef8361f01b83f0bb29d 308 SUPERFAMILY SSF52151 28 278 2.3E-43 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Atu0691 b625fc09d3455ef8361f01b83f0bb29d 308 Pfam PF01734 Patatin-like phospholipase 33 203 2.2E-21 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 Gene3D G3DSA:2.40.50.940 222 349 4.7E-31 T 14-10-2018 Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 Pfam PF08402 TOBE domain 279 348 1.7E-10 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 SUPERFAMILY SSF50331 236 353 7.87E-28 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 Pfam PF00005 ABC transporter 19 161 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 Gene3D G3DSA:3.40.50.300 2 221 7.9E-63 T 14-10-2018 Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 Gene3D G3DSA:2.40.50.140 286 340 4.7E-31 T 14-10-2018 Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 SMART SM00382 28 219 5.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 SUPERFAMILY SSF52540 4 242 1.19E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3171 f5ba6225ff97d998d4245b93194c5e26 358 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2297 683c34bdaa3c400912279a70e17bfdec 349 Pfam PF13439 Glycosyltransferase Family 4 15 166 3.3E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu2297 683c34bdaa3c400912279a70e17bfdec 349 Pfam PF13692 Glycosyl transferases group 1 183 287 1.1E-15 T 14-10-2018 Atu2297 683c34bdaa3c400912279a70e17bfdec 349 Gene3D G3DSA:3.40.50.2000 174 333 6.3E-23 T 14-10-2018 Atu2297 683c34bdaa3c400912279a70e17bfdec 349 SUPERFAMILY SSF53756 1 330 1.3E-57 T 14-10-2018 Atu2297 683c34bdaa3c400912279a70e17bfdec 349 Gene3D G3DSA:3.40.50.2000 3 173 9.2E-17 T 14-10-2018 Atu3442 428d1b805cbeb52d7b79b996dc489e8f 531 SUPERFAMILY SSF53850 32 527 2.35E-122 T 14-10-2018 Atu3442 428d1b805cbeb52d7b79b996dc489e8f 531 PIRSF PIRSF002741 5 531 4.2E-120 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3442 428d1b805cbeb52d7b79b996dc489e8f 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 436 7.7E-80 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3442 428d1b805cbeb52d7b79b996dc489e8f 531 Gene3D G3DSA:3.40.190.10 46 511 4.0E-112 T 14-10-2018 Atu3442 428d1b805cbeb52d7b79b996dc489e8f 531 Gene3D G3DSA:3.10.105.10 280 497 4.0E-112 T 14-10-2018 Atu3442 428d1b805cbeb52d7b79b996dc489e8f 531 Gene3D G3DSA:3.90.76.10 67 185 4.0E-112 T 14-10-2018 Atu1837 931eeeed31cd718adec4a1e75b93df9b 176 SUPERFAMILY SSF47413 8 75 4.44E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu1837 931eeeed31cd718adec4a1e75b93df9b 176 Gene3D G3DSA:1.10.260.40 11 81 6.0E-11 T 14-10-2018 Atu1837 931eeeed31cd718adec4a1e75b93df9b 176 SMART SM00530 15 71 2.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu1837 931eeeed31cd718adec4a1e75b93df9b 176 Pfam PF12844 Helix-turn-helix domain 13 76 7.5E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu3966 c800e416a632a61e44660bf7f39e10ab 357 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 227 1.1E-5 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu3966 c800e416a632a61e44660bf7f39e10ab 357 Gene3D G3DSA:3.30.360.10 125 340 2.4E-43 T 14-10-2018 Atu3966 c800e416a632a61e44660bf7f39e10ab 357 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 3.8E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3966 c800e416a632a61e44660bf7f39e10ab 357 Gene3D G3DSA:3.40.50.720 1 124 6.5E-31 T 14-10-2018 Atu3966 c800e416a632a61e44660bf7f39e10ab 357 SUPERFAMILY SSF55347 129 278 1.74E-23 T 14-10-2018 Atu3966 c800e416a632a61e44660bf7f39e10ab 357 SUPERFAMILY SSF51735 2 155 6.62E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3916 81afef60ac9ab3627141a46b00fd810c 702 Pfam PF00593 TonB dependent receptor 233 700 2.2E-64 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu3916 81afef60ac9ab3627141a46b00fd810c 702 SUPERFAMILY SSF56935 48 702 9.77E-127 T 14-10-2018 Atu3916 81afef60ac9ab3627141a46b00fd810c 702 Gene3D G3DSA:2.40.170.20 180 702 6.9E-141 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atu3916 81afef60ac9ab3627141a46b00fd810c 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 169 1.8E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu3916 81afef60ac9ab3627141a46b00fd810c 702 Gene3D G3DSA:2.170.130.10 46 174 2.5E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu0783 3f7ddf907a4f17eaf1e9d973801a8e2d 401 PIRSF PIRSF012641 37 401 1.0E-185 T 14-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase Atu0783 3f7ddf907a4f17eaf1e9d973801a8e2d 401 Pfam PF15887 Putative zinc-binding metallo-peptidase 137 384 6.8E-103 T 14-10-2018 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase Atu0783 3f7ddf907a4f17eaf1e9d973801a8e2d 401 Pfam PF10005 zinc-ribbon domain 40 131 1.1E-31 T 14-10-2018 IPR011201 Zinc-ribbon domain, bacteria Atu3588 70d678b8338194b312eb5a0e747a2525 215 SMART SM00478 51 203 1.1E-12 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atu3588 70d678b8338194b312eb5a0e747a2525 215 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 189 8.8E-9 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atu3588 70d678b8338194b312eb5a0e747a2525 215 SUPERFAMILY SSF48150 31 203 2.79E-35 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atu3588 70d678b8338194b312eb5a0e747a2525 215 Gene3D G3DSA:1.10.340.30 39 151 5.3E-54 T 14-10-2018 Atu3588 70d678b8338194b312eb5a0e747a2525 215 Gene3D G3DSA:1.10.1670.40 15 201 5.3E-54 T 14-10-2018 Atu1690 4be27cb48a03e77176c9882f11062f93 405 Gene3D G3DSA:2.170.190.11 48 141 8.1E-120 T 14-10-2018 Atu1690 4be27cb48a03e77176c9882f11062f93 405 SUPERFAMILY SSF63882 4 175 1.7E-50 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1690 4be27cb48a03e77176c9882f11062f93 405 SUPERFAMILY SSF53218 177 322 1.31E-38 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atu1690 4be27cb48a03e77176c9882f11062f93 405 Pfam PF03454 MoeA C-terminal region (domain IV) 332 402 2.5E-14 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1690 4be27cb48a03e77176c9882f11062f93 405 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 288 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Atu1690 4be27cb48a03e77176c9882f11062f93 405 SMART SM00852 180 319 1.9E-39 T 14-10-2018 IPR001453 MoaB/Mog domain Atu1690 4be27cb48a03e77176c9882f11062f93 405 Gene3D G3DSA:3.90.105.10 24 174 8.1E-120 T 14-10-2018 Atu1690 4be27cb48a03e77176c9882f11062f93 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 166 1.5E-39 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1690 4be27cb48a03e77176c9882f11062f93 405 SUPERFAMILY SSF63867 329 403 1.14E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1690 4be27cb48a03e77176c9882f11062f93 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 310 5.9E-25 T 14-10-2018 IPR001453 MoaB/Mog domain Atu1690 4be27cb48a03e77176c9882f11062f93 405 Gene3D G3DSA:2.40.340.10 328 395 8.1E-120 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1690 4be27cb48a03e77176c9882f11062f93 405 Pfam PF00994 Probable molybdopterin binding domain 180 318 2.0E-23 T 14-10-2018 IPR001453 MoaB/Mog domain Atu1690 4be27cb48a03e77176c9882f11062f93 405 Gene3D G3DSA:3.40.980.10 175 327 8.1E-120 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Pfam PF01225 Mur ligase family, catalytic domain 10 106 1.9E-29 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Gene3D G3DSA:3.40.50.720 9 95 1.1E-32 T 14-10-2018 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 7 465 43.474 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 SUPERFAMILY SSF51984 10 94 3.14E-29 T 14-10-2018 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 SUPERFAMILY SSF53244 317 460 5.8E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Gene3D G3DSA:3.40.1190.10 96 315 4.6E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Gene3D G3DSA:3.90.190.20 316 469 1.2E-53 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 403 8.8E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 SUPERFAMILY SSF53623 93 315 3.92E-70 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 Pfam PF08245 Mur ligase middle domain 112 298 2.0E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atu2093 0600cf0b6ef7f9ba983c2cb223f79d93 471 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 10 458 3.9E-165 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SMART SM00028 217 250 0.11 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SMART SM00028 142 175 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SUPERFAMILY SSF48452 142 263 2.8E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SMART SM00223 35 100 0.008 T 14-10-2018 IPR000177 Apple domain GO:0005515|GO:0005576|GO:0006508 Reactome: R-HSA-140837 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 486 587 9.1E-27 T 14-10-2018 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Gene3D G3DSA:1.25.40.10 123 273 7.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1365 1384 3.8E-5 T 14-10-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Pfam PF00207 Alpha-2-macroglobulin family 1162 1238 1.9E-6 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SUPERFAMILY SSF48239 1359 1605 7.07E-44 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SMART SM01359 950 1094 4.4E-43 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 950 1094 1.0E-15 T 14-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Gene3D G3DSA:3.50.4.10 32 99 6.7E-9 T 14-10-2018 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Pfam PF00024 PAN domain 33 83 1.3E-6 T 14-10-2018 IPR003609 PAN/Apple domain Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SUPERFAMILY SSF57414 42 86 3.34E-6 T 14-10-2018 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 SMART SM01360 1155 1244 1.5E-25 T 14-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Gene3D G3DSA:1.50.10.20 1357 1616 5.9E-26 T 14-10-2018 Atu3695 2f59795f1f23b8b81134975984b41c02 1818 PIRSF PIRSF038980 43 1817 0.0 T 14-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria Atu3695 2f59795f1f23b8b81134975984b41c02 1818 Pfam PF01835 MG2 domain 594 688 6.9E-21 T 14-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 Pfam PF00037 4Fe-4S binding domain 35 56 3.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 Gene3D G3DSA:3.30.70.20 2 97 1.5E-28 T 14-10-2018 Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.6E-18 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.6E-18 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.6E-18 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 SUPERFAMILY SSF54862 3 103 3.93E-25 T 14-10-2018 Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu2751 1133c9f4b701d1f5eaeb3b5ccae6b842 112 Pfam PF11953 Domain of unknown function (DUF3470) 65 105 2.0E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal Atu3869 4956bf178e45a82a88078acbd3a1346c 540 SUPERFAMILY SSF52540 304 525 6.82E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3869 4956bf178e45a82a88078acbd3a1346c 540 Pfam PF12848 ABC transporter 229 312 8.2E-26 T 14-10-2018 IPR032781 ABC-transporter extension domain Atu3869 4956bf178e45a82a88078acbd3a1346c 540 Pfam PF00005 ABC transporter 342 471 4.0E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3869 4956bf178e45a82a88078acbd3a1346c 540 Gene3D G3DSA:3.40.50.300 287 536 2.0E-58 T 14-10-2018 Atu3869 4956bf178e45a82a88078acbd3a1346c 540 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3869 4956bf178e45a82a88078acbd3a1346c 540 Gene3D G3DSA:3.40.50.300 2 284 1.2E-64 T 14-10-2018 Atu3869 4956bf178e45a82a88078acbd3a1346c 540 SMART SM00382 349 516 2.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3869 4956bf178e45a82a88078acbd3a1346c 540 SMART SM00382 26 235 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3869 4956bf178e45a82a88078acbd3a1346c 540 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3869 4956bf178e45a82a88078acbd3a1346c 540 Pfam PF00005 ABC transporter 21 190 5.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3869 4956bf178e45a82a88078acbd3a1346c 540 SUPERFAMILY SSF52540 2 242 8.26E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6075 e50f973f04deadf34c23395e94d99e74 313 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 30 68 1.4E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu6075 e50f973f04deadf34c23395e94d99e74 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 304 3.0E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6075 e50f973f04deadf34c23395e94d99e74 313 SUPERFAMILY SSF161098 97 286 6.67E-29 T 14-10-2018 IPR035906 MetI-like superfamily Atu6075 e50f973f04deadf34c23395e94d99e74 313 Gene3D G3DSA:1.10.3720.10 91 306 3.6E-26 T 14-10-2018 IPR035906 MetI-like superfamily Atu0844 68b8452c4bf8a62a701fd3c6e3bbe588 302 SUPERFAMILY SSF141523 158 301 3.66E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0844 68b8452c4bf8a62a701fd3c6e3bbe588 302 Gene3D G3DSA:2.40.440.10 141 302 9.6E-37 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0844 68b8452c4bf8a62a701fd3c6e3bbe588 302 Pfam PF03734 L,D-transpeptidase catalytic domain 164 301 6.3E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 SMART SM00917 307 564 1.0E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 16 563 3.1E-228 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 Pfam PF00682 HMGL-like 41 318 2.1E-75 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 16 565 52.953 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 Gene3D G3DSA:3.20.20.70 20 385 1.1E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 250 263 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 48 64 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 SUPERFAMILY SSF110921 453 563 7.59E-33 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 SUPERFAMILY SSF89000 397 446 5.1E-13 T 14-10-2018 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 SUPERFAMILY SSF51569 30 337 2.01E-94 T 14-10-2018 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 Pfam PF08502 LeuA allosteric (dimerisation) domain 436 564 1.5E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Atu2264 e85f8e783bb59f27efe00223ec7f294e 569 Gene3D G3DSA:3.30.160.270 386 563 9.5E-53 T 14-10-2018 Atu0719 75d4a91cb7e005a92935fd4e079f5aa7 211 Gene3D G3DSA:2.160.10.10 18 210 4.5E-52 T 14-10-2018 Atu0719 75d4a91cb7e005a92935fd4e079f5aa7 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu0719 75d4a91cb7e005a92935fd4e079f5aa7 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 1.2E-5 T 14-10-2018 IPR001451 Hexapeptide repeat Atu0719 75d4a91cb7e005a92935fd4e079f5aa7 211 SUPERFAMILY SSF51161 15 206 2.91E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu3587 7aca0e3d685b58700b6db050b5557c07 472 Pfam PF13560 Helix-turn-helix domain 8 67 1.2E-11 T 14-10-2018 Atu3587 7aca0e3d685b58700b6db050b5557c07 472 SUPERFAMILY SSF47413 5 72 7.78E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3587 7aca0e3d685b58700b6db050b5557c07 472 PIRSF PIRSF019251 1 472 2.5E-182 T 14-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 Atu3587 7aca0e3d685b58700b6db050b5557c07 472 Pfam PF06114 IrrE N-terminal-like domain 193 310 9.1E-18 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Atu3587 7aca0e3d685b58700b6db050b5557c07 472 Gene3D G3DSA:1.10.260.40 7 85 3.4E-14 T 14-10-2018 Atu3587 7aca0e3d685b58700b6db050b5557c07 472 SMART SM00530 11 66 4.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu3587 7aca0e3d685b58700b6db050b5557c07 472 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 311 467 1.7E-65 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 Gene3D G3DSA:3.40.50.300 2 259 3.2E-53 T 14-10-2018 Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 Gene3D G3DSA:3.40.50.300 268 506 2.6E-43 T 14-10-2018 Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 Pfam PF00005 ABC transporter 285 438 2.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 SUPERFAMILY SSF52540 18 243 1.98E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 SUPERFAMILY SSF52540 278 496 8.24E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 SMART SM00382 293 487 4.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 SMART SM00382 44 233 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3488 c48ec05f2a488b89f94bf24b384f107a 510 Pfam PF00005 ABC transporter 35 185 2.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4555 d54e80a4d5a7c9faad250d367f2dc968 261 Pfam PF01261 Xylose isomerase-like TIM barrel 19 195 7.3E-14 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4555 d54e80a4d5a7c9faad250d367f2dc968 261 SUPERFAMILY SSF51658 1 257 1.44E-64 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4555 d54e80a4d5a7c9faad250d367f2dc968 261 Gene3D G3DSA:3.20.20.150 1 257 1.2E-57 T 14-10-2018 Atu4555 d54e80a4d5a7c9faad250d367f2dc968 261 PIRSF PIRSF036778 1 261 2.1E-126 T 14-10-2018 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type Atu1197 9c96d19f5aef1943a952604474fde747 162 Pfam PF09278 MerR, DNA binding 44 108 5.2E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding Atu1197 9c96d19f5aef1943a952604474fde747 162 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1197 9c96d19f5aef1943a952604474fde747 162 SUPERFAMILY SSF46955 1 126 1.39E-36 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu1197 9c96d19f5aef1943a952604474fde747 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.8E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1197 9c96d19f5aef1943a952604474fde747 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 5.8E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1197 9c96d19f5aef1943a952604474fde747 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 5.8E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1197 9c96d19f5aef1943a952604474fde747 162 Gene3D G3DSA:1.10.1660.10 1 125 1.3E-32 T 14-10-2018 Atu1197 9c96d19f5aef1943a952604474fde747 162 SMART SM00422 1 70 8.9E-31 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1197 9c96d19f5aef1943a952604474fde747 162 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.1E-44 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 Atu1197 9c96d19f5aef1943a952604474fde747 162 Pfam PF00376 MerR family regulatory protein 2 39 1.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu2714 ecce7fc232faa0986f5556c3cd328ce3 337 Gene3D G3DSA:3.40.190.10 130 330 5.4E-113 T 14-10-2018 Atu2714 ecce7fc232faa0986f5556c3cd328ce3 337 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 20 335 2.2E-121 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 Atu2714 ecce7fc232faa0986f5556c3cd328ce3 337 Pfam PF13343 Bacterial extracellular solute-binding protein 81 294 4.3E-19 T 14-10-2018 Atu2714 ecce7fc232faa0986f5556c3cd328ce3 337 Gene3D G3DSA:3.40.190.10 30 306 5.4E-113 T 14-10-2018 Atu2714 ecce7fc232faa0986f5556c3cd328ce3 337 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 26 330 6.9E-113 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 Atu2714 ecce7fc232faa0986f5556c3cd328ce3 337 SUPERFAMILY SSF53850 28 330 3.8E-63 T 14-10-2018 Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 Pfam PF12840 Helix-turn-helix domain 10 68 6.9E-15 T 14-10-2018 Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 SUPERFAMILY SSF46785 3 93 1.29E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 SMART SM00418 8 89 5.1E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu5321 ea476849f363f3db36ba03c5fbc8b54c 119 Gene3D G3DSA:1.10.10.10 2 93 3.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 SUPERFAMILY SSF81343 9 193 1.57E-19 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 SUPERFAMILY SSF54292 263 355 2.73E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 Gene3D G3DSA:3.10.20.30 259 364 1.4E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 SUPERFAMILY SSF55073 370 557 6.12E-47 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 SMART SM00044 329 540 1.7E-15 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 373 555 2.4E-28 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 Gene3D G3DSA:1.20.1300.10 6 203 1.3E-5 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 269 344 3.4E-8 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atu2580 acc21aa7a8dd0c9a8f00e696aa02da59 564 Gene3D G3DSA:3.30.70.1230 365 563 2.2E-47 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4882 e4d041467cb8dc8c6f811a7c61592fdc 60 Pfam PF11972 HTH DNA binding domain 20 52 3.1E-10 T 14-10-2018 IPR021068 HTH DNA binding domain Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 SMART SM00851 28 142 3.7E-49 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 17 538 1.2E-204 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 16 538 42.972 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 Pfam PF01808 AICARFT/IMPCHase bienzyme 148 462 2.3E-117 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 SMART SM00798 147 463 1.3E-202 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 SUPERFAMILY SSF53927 223 538 2.11E-125 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 SUPERFAMILY SSF52335 16 207 8.9E-68 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 Gene3D G3DSA:3.40.140.20 218 371 2.1E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 PIRSF PIRSF000414 11 538 3.3E-205 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 Gene3D G3DSA:3.40.140.20 395 538 9.8E-53 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 Pfam PF02142 MGS-like domain 29 141 1.5E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Atu2823 8b4100ef8fe61e26eba10db2ad967fee 538 Gene3D G3DSA:3.40.50.1380 9 212 8.8E-82 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 Gene3D G3DSA:3.40.50.970 372 595 8.8E-65 T 14-10-2018 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 SUPERFAMILY SSF52467 197 371 2.76E-63 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 SUPERFAMILY SSF52518 382 583 5.0E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 177 6.9E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 406 553 6.7E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 13 576 5.9E-242 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 SUPERFAMILY SSF52518 10 186 9.11E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 442 461 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 340 3.5E-42 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 Gene3D G3DSA:3.40.50.970 4 192 2.0E-71 T 14-10-2018 Atu2036 47c66347ae01a4dc870c60cfa20986d7 597 Gene3D G3DSA:3.40.50.1220 198 371 8.3E-59 T 14-10-2018 Atu1376 af1dd9ceaa70fed18d52ba9f883982d3 240 Gene3D G3DSA:3.40.1160.10 2 240 9.8E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu1376 af1dd9ceaa70fed18d52ba9f883982d3 240 PIRSF PIRSF005650 2 240 1.9E-88 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Atu1376 af1dd9ceaa70fed18d52ba9f883982d3 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 238 41.641 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Atu1376 af1dd9ceaa70fed18d52ba9f883982d3 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 238 1.3E-95 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Atu1376 af1dd9ceaa70fed18d52ba9f883982d3 240 SUPERFAMILY SSF53633 5 239 1.07E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu1376 af1dd9ceaa70fed18d52ba9f883982d3 240 Pfam PF00696 Amino acid kinase family 8 217 4.5E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atu4396 40a0acda8d65894b34e6cfb190707f88 171 SUPERFAMILY SSF55718 16 134 1.24E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Atu4396 40a0acda8d65894b34e6cfb190707f88 171 Pfam PF02036 SCP-2 sterol transfer family 30 128 3.0E-7 T 14-10-2018 IPR003033 SCP2 sterol-binding domain Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Gene3D G3DSA:3.30.70.2740 349 435 1.8E-32 T 14-10-2018 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 229 475 9.8E-55 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Pfam PF01565 FAD binding domain 50 185 7.4E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Gene3D G3DSA:3.30.465.10 103 224 8.0E-44 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Gene3D G3DSA:1.10.45.10 436 476 4.1E-17 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 SUPERFAMILY SSF55103 199 476 3.6E-60 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Gene3D G3DSA:3.30.43.10 4 101 2.4E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 Gene3D G3DSA:3.30.70.2190 225 348 8.6E-38 T 14-10-2018 Atu0723 03b12fc861e1eef9a6f81015afc98aac 478 SUPERFAMILY SSF56176 10 225 1.8E-69 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.7E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.7E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.7E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 Pfam PF01037 Lrp/AsnC ligand binding domain 73 146 1.6E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 Gene3D G3DSA:3.30.70.920 59 143 9.1E-23 T 14-10-2018 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 SUPERFAMILY SSF46785 6 66 2.74E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 1.0E-20 T 14-10-2018 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 SMART SM00344 6 115 1.3E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 Gene3D G3DSA:1.10.10.10 7 58 4.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 SUPERFAMILY SSF54909 70 151 1.61E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3807 ccf81ae8f4ebeec262c3eb5b9561694a 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 SUPERFAMILY SSF46600 790 830 2.48E-10 T 14-10-2018 IPR036876 UVR domain superfamily Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Pfam PF12344 Ultra-violet resistance protein B 718 759 5.7E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Gene3D G3DSA:3.40.50.300 581 762 1.4E-49 T 14-10-2018 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Gene3D G3DSA:4.10.860.10 789 836 1.6E-8 T 14-10-2018 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Pfam PF04851 Type III restriction enzyme, res subunit 180 305 4.9E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 172 829 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 SMART SM00490 626 712 4.1E-18 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Hamap MF_00204 UvrABC system protein B [uvrB]. 169 831 41.442 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Pfam PF02151 UvrB/uvrC motif 799 830 1.0E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Gene3D G3DSA:3.40.50.300 441 580 4.2E-45 T 14-10-2018 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 SUPERFAMILY SSF52540 175 579 5.12E-131 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Pfam PF00271 Helicase conserved C-terminal domain 607 710 5.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 SUPERFAMILY SSF52540 199 747 3.88E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 Gene3D G3DSA:3.40.50.300 166 402 3.5E-74 T 14-10-2018 Atu2001 edece7df9f51903d8617ea25e67dd7ed 988 SMART SM00487 175 592 2.4E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 Gene3D G3DSA:3.40.50.720 9 177 5.5E-46 T 14-10-2018 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 488 7.9E-118 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 11 489 1.1E-179 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 189 5.3E-58 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 SUPERFAMILY SSF51735 3 192 2.36E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 489 89.416 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 5.1E-50 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 5.1E-50 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 5.1E-50 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 5.1E-50 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 5.1E-50 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 SUPERFAMILY SSF55347 179 488 4.25E-114 T 14-10-2018 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 Gene3D G3DSA:3.30.360.10 178 489 4.9E-124 T 14-10-2018 Atu0600 8a63f4a156439a8a294472c09a4a9eb8 491 PIRSF PIRSF000110 1 491 6.0E-174 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 TIGRFAM TIGR01391 dnaG: DNA primase 3 421 1.8E-129 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 SUPERFAMILY SSF57783 1 105 2.72E-33 T 14-10-2018 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Pfam PF01807 CHC2 zinc finger 5 102 5.6E-29 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Hamap MF_00974 DNA primase [dnaG]. 2 594 25.399 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 SMART SM00400 39 93 3.2E-24 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 SMART SM00493 262 333 6.0E-14 T 14-10-2018 IPR006171 TOPRIM domain Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Gene3D G3DSA:3.90.980.10 116 242 3.7E-40 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Pfam PF10410 DnaB-helicase binding domain of primase 376 423 6.6E-5 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Gene3D G3DSA:3.90.580.10 1 104 2.5E-35 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 PIRSF PIRSF002811 1 633 1.2E-140 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 SUPERFAMILY SSF56731 117 424 5.23E-101 T 14-10-2018 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 253 1.2E-41 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Gene3D G3DSA:3.40.1360.10 243 370 1.2E-39 T 14-10-2018 Atu2168 a48bd01566f0f9df8dab5f49e02fb3eb 661 Pfam PF13662 Toprim domain 263 328 4.3E-16 T 14-10-2018 IPR006171 TOPRIM domain Atu2052 4b0c92d068c06ed683548206ae0e8a94 1234 PIRSF PIRSF034039 2 1234 0.0 T 14-10-2018 IPR017023 Uncharacterised conserved protein UCP034039 Atu2052 4b0c92d068c06ed683548206ae0e8a94 1234 Pfam PF13502 AsmA-like C-terminal region 886 1104 9.1E-25 T 14-10-2018 IPR032712 AsmA-like, C-terminal Atu2052 4b0c92d068c06ed683548206ae0e8a94 1234 Pfam PF05170 AsmA family 7 171 1.4E-11 T 14-10-2018 IPR007844 AsmA Atu3212 d5251dc9dd9546031c1311f556d53e34 565 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 35 60 3.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atu3212 d5251dc9dd9546031c1311f556d53e34 565 Gene3D G3DSA:3.40.190.10 37 318 5.9E-68 T 14-10-2018 Atu3212 d5251dc9dd9546031c1311f556d53e34 565 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 111 457 8.6E-84 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3212 d5251dc9dd9546031c1311f556d53e34 565 SUPERFAMILY SSF53850 63 558 5.07E-122 T 14-10-2018 Atu3212 d5251dc9dd9546031c1311f556d53e34 565 PIRSF PIRSF002741 26 565 5.0E-117 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3212 d5251dc9dd9546031c1311f556d53e34 565 Gene3D G3DSA:3.10.105.10 319 533 2.7E-48 T 14-10-2018 Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 SUPERFAMILY SSF53850 89 297 1.39E-42 T 14-10-2018 Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 SUPERFAMILY SSF46785 4 84 2.9E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 Gene3D G3DSA:3.40.190.10 162 266 1.4E-63 T 14-10-2018 Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 Gene3D G3DSA:1.10.10.10 3 88 9.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 Gene3D G3DSA:3.40.190.10 91 291 1.4E-63 T 14-10-2018 Atu2480 6d3dedfbd2e6d821afdb51a49c0c6747 299 Pfam PF03466 LysR substrate binding domain 89 293 7.1E-40 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3905 4283d243af0006f2b68cdcd21c06905d 430 Pfam PF13379 NMT1-like family 41 300 1.4E-104 T 14-10-2018 Atu3905 4283d243af0006f2b68cdcd21c06905d 430 Gene3D G3DSA:3.40.190.10 48 412 3.1E-137 T 14-10-2018 Atu3905 4283d243af0006f2b68cdcd21c06905d 430 SUPERFAMILY SSF53850 48 290 3.39E-24 T 14-10-2018 Atu3905 4283d243af0006f2b68cdcd21c06905d 430 Gene3D G3DSA:3.40.190.10 141 417 3.1E-137 T 14-10-2018 Atu0611 8967d1620f90d5b36f79f1205593c5bc 302 SUPERFAMILY SSF161098 11 297 2.75E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu0611 8967d1620f90d5b36f79f1205593c5bc 302 Gene3D G3DSA:1.10.3720.10 19 300 9.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu0611 8967d1620f90d5b36f79f1205593c5bc 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 294 1.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 Gene3D G3DSA:3.40.50.880 255 437 7.1E-8 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 6 403 8.1E-99 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 Gene3D G3DSA:3.40.50.300 4 187 5.5E-22 T 14-10-2018 Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 SUPERFAMILY SSF52540 1 199 2.26E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 3 438 41.802 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 SUPERFAMILY SSF52317 245 437 6.23E-28 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 248 435 5.7E-29 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Atu2793 2d03c3b28d58cce6b77cf9fb41c2321e 438 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 191 1.1E-13 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atu2744 94a48387c4cc6375574c64dc6e7773d3 335 PIRSF PIRSF006470 1 331 2.4E-102 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu2744 94a48387c4cc6375574c64dc6e7773d3 335 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 287 2.0E-73 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu2744 94a48387c4cc6375574c64dc6e7773d3 335 Gene3D G3DSA:3.40.190.170 25 335 1.5E-101 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu2744 94a48387c4cc6375574c64dc6e7773d3 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 313 3.6E-83 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu1146 bbc04672673f2a109aadb3db618f0fc0 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 123 151 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu1146 bbc04672673f2a109aadb3db618f0fc0 210 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 13 209 3.0E-81 T 14-10-2018 IPR017694 Phosphonate metabolism protein, transferase hexapeptide repeat family Atu1146 bbc04672673f2a109aadb3db618f0fc0 210 SUPERFAMILY SSF51161 16 206 1.2E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu1146 bbc04672673f2a109aadb3db618f0fc0 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 2.9E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1146 bbc04672673f2a109aadb3db618f0fc0 210 Gene3D G3DSA:2.160.10.10 6 210 8.8E-54 T 14-10-2018 Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 SMART SM00116 200 248 4.0E-7 T 14-10-2018 IPR000644 CBS domain Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Gene3D G3DSA:1.10.357.20 267 453 6.0E-57 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Pfam PF01769 Divalent cation transporter 315 445 5.6E-30 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 SUPERFAMILY SSF161093 275 452 2.75E-48 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 SUPERFAMILY SSF54631 127 268 1.89E-26 T 14-10-2018 Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 SMART SM00924 25 128 1.8E-17 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Pfam PF03448 MgtE intracellular N domain 27 125 1.7E-15 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 TIGRFAM TIGR00400 mgtE: magnesium transporter 27 452 2.9E-96 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Gene3D G3DSA:1.25.60.10 22 123 1.2E-7 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Pfam PF00571 CBS domain 201 245 6.7E-7 T 14-10-2018 IPR000644 CBS domain Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Pfam PF00571 CBS domain 128 184 4.6E-5 T 14-10-2018 IPR000644 CBS domain Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 SUPERFAMILY SSF158791 26 125 5.23E-14 T 14-10-2018 Atu0999 9f1ad3b4fe120a7abc7d2bcac4bee179 457 Gene3D G3DSA:3.10.580.10 125 252 4.3E-36 T 14-10-2018 Atu3479 94f61d854670fd078d63202c3ea4f894 663 SUPERFAMILY SSF51230 586 658 8.77E-19 T 14-10-2018 IPR011053 Single hybrid motif Atu3479 94f61d854670fd078d63202c3ea4f894 663 Pfam PF00364 Biotin-requiring enzyme 594 657 4.6E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu3479 94f61d854670fd078d63202c3ea4f894 663 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3479 94f61d854670fd078d63202c3ea4f894 663 SUPERFAMILY SSF51246 330 444 1.05E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu3479 94f61d854670fd078d63202c3ea4f894 663 SMART SM00878 335 442 7.4E-50 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3479 94f61d854670fd078d63202c3ea4f894 663 SUPERFAMILY SSF52440 1 113 9.35E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu3479 94f61d854670fd078d63202c3ea4f894 663 Gene3D G3DSA:2.40.50.100 595 659 7.5E-21 T 14-10-2018 Atu3479 94f61d854670fd078d63202c3ea4f894 663 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 321 1.3E-77 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3479 94f61d854670fd078d63202c3ea4f894 663 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 615 632 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3479 94f61d854670fd078d63202c3ea4f894 663 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3479 94f61d854670fd078d63202c3ea4f894 663 SUPERFAMILY SSF56059 83 347 2.12E-69 T 14-10-2018 Atu3479 94f61d854670fd078d63202c3ea4f894 663 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.5E-47 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3479 94f61d854670fd078d63202c3ea4f894 663 Gene3D G3DSA:3.30.470.130 1 449 4.2E-198 T 14-10-2018 Atu3479 94f61d854670fd078d63202c3ea4f894 663 Pfam PF02785 Biotin carboxylase C-terminal domain 335 442 1.7E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 731 824 2.3E-16 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Gene3D G3DSA:3.30.70.1400 517 738 2.1E-93 T 14-10-2018 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Gene3D G3DSA:3.30.9.10 86 329 9.5E-138 T 14-10-2018 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 SUPERFAMILY SSF101790 753 836 3.92E-17 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 SUPERFAMILY SSF51905 5 391 5.83E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Pfam PF16350 FAD dependent oxidoreductase central domain 371 424 1.6E-17 T 14-10-2018 IPR032503 FAD dependent oxidoreductase, central domain Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 SUPERFAMILY SSF54373 220 329 2.2E-27 T 14-10-2018 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Pfam PF01571 Aminomethyltransferase folate-binding domain 427 724 2.1E-63 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 SUPERFAMILY SSF103025 420 745 1.73E-81 T 14-10-2018 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Gene3D G3DSA:3.50.50.60 8 387 9.5E-138 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Pfam PF01266 FAD dependent oxidoreductase 7 368 1.1E-63 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Gene3D G3DSA:2.40.30.110 744 824 1.2E-16 T 14-10-2018 Atu1632 7cb7396ac2c55f0e72fc85c32d49ac8d 837 Gene3D G3DSA:3.30.1360.120 420 714 2.1E-93 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu3572 ebbfd02881516842075d04d76ceeb41d 145 Pfam PF01381 Helix-turn-helix 17 69 1.6E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu3572 ebbfd02881516842075d04d76ceeb41d 145 Gene3D G3DSA:1.10.260.40 8 78 2.3E-18 T 14-10-2018 Atu3572 ebbfd02881516842075d04d76ceeb41d 145 SUPERFAMILY SSF47413 3 74 6.7E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3572 ebbfd02881516842075d04d76ceeb41d 145 SMART SM00530 16 71 5.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu5228 fed6c5993357802ae450cb8bca382bf1 503 Gene3D G3DSA:3.40.309.10 263 456 3.6E-174 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu5228 fed6c5993357802ae450cb8bca382bf1 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu5228 fed6c5993357802ae450cb8bca382bf1 503 SUPERFAMILY SSF53720 12 490 1.44E-162 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu5228 fed6c5993357802ae450cb8bca382bf1 503 Pfam PF00171 Aldehyde dehydrogenase family 21 486 1.8E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu5228 fed6c5993357802ae450cb8bca382bf1 503 Gene3D G3DSA:3.40.605.10 17 484 3.6E-174 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu5228 fed6c5993357802ae450cb8bca382bf1 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu1979 c2f5263759278b305bc75f8ee96e7cd9 410 Pfam PF02353 Mycolic acid cyclopropane synthetase 137 402 6.4E-82 T 14-10-2018 Atu1979 c2f5263759278b305bc75f8ee96e7cd9 410 PIRSF PIRSF003085 4 410 2.3E-142 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Atu1979 c2f5263759278b305bc75f8ee96e7cd9 410 SUPERFAMILY SSF53335 143 407 1.14E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1979 c2f5263759278b305bc75f8ee96e7cd9 410 Gene3D G3DSA:3.40.50.150 142 410 6.8E-99 T 14-10-2018 Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 Gene3D G3DSA:3.40.50.1100 21 217 3.1E-186 T 14-10-2018 Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 PIRSF PIRSF001413 11 406 1.9E-159 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 SUPERFAMILY SSF53686 14 401 3.54E-148 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 18 400 1.8E-191 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 389 1.8E-44 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 13 402 52.018 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 Gene3D G3DSA:3.40.50.1100 65 395 3.1E-186 T 14-10-2018 Atu0018 b0f4ae5aa6ae202bf40349f8a3d784c6 406 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 92 106 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu4547 5c17060f1aca3c2eb1124e73d2011bf3 235 SMART SM00882 5 218 4.2E-78 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Atu4547 5c17060f1aca3c2eb1124e73d2011bf3 235 Gene3D G3DSA:3.40.1080.10 1 217 1.8E-82 T 14-10-2018 Atu4547 5c17060f1aca3c2eb1124e73d2011bf3 235 Pfam PF01144 Coenzyme A transferase 6 217 5.1E-68 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Atu4547 5c17060f1aca3c2eb1124e73d2011bf3 235 SUPERFAMILY SSF100950 2 223 3.04E-83 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu4547 5c17060f1aca3c2eb1124e73d2011bf3 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 3.0E-114 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 Atu4547 5c17060f1aca3c2eb1124e73d2011bf3 235 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SUPERFAMILY SSF54814 204 281 8.5E-32 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 9 346 4.7E-141 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Pfam PF13184 NusA-like KH domain 234 300 2.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 7 425 31.047 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SUPERFAMILY SSF50249 136 203 6.51E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SMART SM00316 138 204 7.7E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Pfam PF08529 NusA N-terminal domain 9 129 4.3E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Gene3D G3DSA:3.30.300.20 203 281 3.8E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SUPERFAMILY SSF47794 357 418 7.53E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Pfam PF00575 S1 RNA binding domain 136 198 1.5E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Gene3D G3DSA:2.40.50.140 140 202 1.1E-24 T 14-10-2018 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Pfam PF14520 Helix-hairpin-helix domain 377 416 1.8E-4 T 14-10-2018 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Gene3D G3DSA:3.30.1480.10 7 132 2.0E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Gene3D G3DSA:3.30.300.20 282 350 1.2E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SUPERFAMILY SSF69705 8 130 2.22E-38 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Gene3D G3DSA:1.10.150.20 435 484 2.9E-6 T 14-10-2018 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 1.7E-19 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 Gene3D G3DSA:1.10.150.20 359 424 1.5E-23 T 14-10-2018 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SMART SM00322 308 374 0.31 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SMART SM00322 234 307 1.8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Atu0089 3e59fafb9acb07081d3da60f89d8a895 538 SUPERFAMILY SSF54814 284 346 7.19E-17 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atu3640 73a2469becaebdfef6a11c7d075981e9 526 Pfam PF15604 Novel toxin 15 352 512 4.1E-56 T 14-10-2018 IPR028949 Novel toxin 15 Atu3640 73a2469becaebdfef6a11c7d075981e9 526 Pfam PF13665 Domain of unknown function (DUF4150) 35 141 1.0E-32 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 Atu2678 ba4d2e153cc57bea704158c98299596c 197 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 2 176 2.8E-47 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Atu2678 ba4d2e153cc57bea704158c98299596c 197 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 176 24.292 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Atu2678 ba4d2e153cc57bea704158c98299596c 197 SUPERFAMILY SSF55144 2 177 4.36E-43 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Atu2678 ba4d2e153cc57bea704158c98299596c 197 Gene3D G3DSA:3.90.1140.10 1 177 1.7E-40 T 14-10-2018 Atu2678 ba4d2e153cc57bea704158c98299596c 197 Pfam PF02834 LigT like Phosphoesterase 92 168 9.3E-14 T 14-10-2018 IPR014051 Phosphoesterase, HXTX Atu2678 ba4d2e153cc57bea704158c98299596c 197 Pfam PF02834 LigT like Phosphoesterase 9 84 1.4E-15 T 14-10-2018 IPR014051 Phosphoesterase, HXTX Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:3.30.2090.10 706 794 2.4E-231 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 6.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82866 297 490 2.62E-34 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82693 42 136 5.49E-16 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:1.20.1640.10 14 503 2.4E-231 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1007 8.4E-139 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82693 139 325 4.45E-16 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:3.30.70.1440 655 854 2.4E-231 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82714 186 267 2.49E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82714 707 792 1.15E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:1.20.1640.10 504 1006 2.4E-231 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:3.30.70.1320 139 328 2.4E-231 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:3.30.70.1430 555 654 2.4E-231 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:3.30.2090.10 181 270 2.4E-231 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 Gene3D G3DSA:3.30.70.1430 42 802 2.4E-231 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82693 554 603 2.27E-6 T 14-10-2018 Atu4219 096752b77fde5850c4073b9aabb1e3b6 1036 SUPERFAMILY SSF82866 791 1014 5.62E-43 T 14-10-2018 Atu1607 8c7cf1642ead633daa3c2f6f1b66fdea 280 Gene3D G3DSA:3.40.140.10 156 279 5.5E-41 T 14-10-2018 Atu1607 8c7cf1642ead633daa3c2f6f1b66fdea 280 SUPERFAMILY SSF102712 199 246 1.7E-5 T 14-10-2018 Atu1607 8c7cf1642ead633daa3c2f6f1b66fdea 280 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 229 234 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Atu1607 8c7cf1642ead633daa3c2f6f1b66fdea 280 TIGRFAM TIGR00608 radc: DNA repair protein RadC 68 275 1.5E-66 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 Atu1607 8c7cf1642ead633daa3c2f6f1b66fdea 280 Pfam PF04002 RadC-like JAB domain 160 276 2.9E-43 T 14-10-2018 IPR025657 RadC-like JAB domain Atu1607 8c7cf1642ead633daa3c2f6f1b66fdea 280 SUPERFAMILY SSF47781 84 139 1.2E-6 T 14-10-2018 IPR010994 RuvA domain 2-like Atu1867 fe9584235179aae21ead293191ce24ae 273 SUPERFAMILY SSF53681 120 269 4.58E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu1867 fe9584235179aae21ead293191ce24ae 273 TIGRFAM TIGR00067 glut_race: glutamate racemase 15 237 9.6E-50 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu1867 fe9584235179aae21ead293191ce24ae 273 Pfam PF01177 Asp/Glu/Hydantoin racemase 17 229 8.8E-15 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu1867 fe9584235179aae21ead293191ce24ae 273 SUPERFAMILY SSF53681 14 117 3.99E-25 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu1867 fe9584235179aae21ead293191ce24ae 273 Gene3D G3DSA:3.40.50.1860 106 221 5.1E-71 T 14-10-2018 Atu1867 fe9584235179aae21ead293191ce24ae 273 Hamap MF_00258 Glutamate racemase [murI]. 13 269 30.703 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu1867 fe9584235179aae21ead293191ce24ae 273 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 194 204 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu1867 fe9584235179aae21ead293191ce24ae 273 Gene3D G3DSA:3.40.50.1860 17 244 5.1E-71 T 14-10-2018 Atu0171 cd6338825b039a3f05932c24ef2589f5 449 SUPERFAMILY SSF161098 248 435 3.01E-33 T 14-10-2018 IPR035906 MetI-like superfamily Atu0171 cd6338825b039a3f05932c24ef2589f5 449 Gene3D G3DSA:1.10.3720.10 245 443 2.9E-30 T 14-10-2018 IPR035906 MetI-like superfamily Atu0171 cd6338825b039a3f05932c24ef2589f5 449 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 226 443 2.1E-76 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Atu0171 cd6338825b039a3f05932c24ef2589f5 449 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 271 439 1.1E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1965 da2333d2804abaa869aa0da70f1923ef 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 197 3.3E-22 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu1965 da2333d2804abaa869aa0da70f1923ef 297 Gene3D G3DSA:3.40.50.720 1 258 2.7E-46 T 14-10-2018 Atu1965 da2333d2804abaa869aa0da70f1923ef 297 SUPERFAMILY SSF51735 2 296 1.08E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3129 35bc632880035a05525ced42646469bf 517 SMART SM00710 348 369 19.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu3129 35bc632880035a05525ced42646469bf 517 SMART SM00710 426 449 530.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu3129 35bc632880035a05525ced42646469bf 517 SMART SM00710 285 306 110.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu3129 35bc632880035a05525ced42646469bf 517 SMART SM00710 321 342 1200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu3129 35bc632880035a05525ced42646469bf 517 SMART SM00710 258 284 9100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Atu3129 35bc632880035a05525ced42646469bf 517 Pfam PF00295 Glycosyl hydrolases family 28 192 400 1.3E-38 T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 Atu3129 35bc632880035a05525ced42646469bf 517 SUPERFAMILY SSF51126 102 468 3.71E-77 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Atu3129 35bc632880035a05525ced42646469bf 517 ProSitePatterns PS00502 Polygalacturonase active site. 328 342 - T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 Atu3129 35bc632880035a05525ced42646469bf 517 Gene3D G3DSA:2.160.20.10 91 473 3.6E-95 T 14-10-2018 IPR012334 Pectin lyase fold Atu4799 641fbb3f658d3dcd741f4cbb798e500d 175 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 174 2.2E-50 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atu4799 641fbb3f658d3dcd741f4cbb798e500d 175 Gene3D G3DSA:2.60.120.10 1 175 5.6E-60 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4799 641fbb3f658d3dcd741f4cbb798e500d 175 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 173 1.0E-91 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atu4799 641fbb3f658d3dcd741f4cbb798e500d 175 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 6.1E-59 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Atu4799 641fbb3f658d3dcd741f4cbb798e500d 175 SUPERFAMILY SSF51182 1 174 6.28E-61 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4722 98eaf09f48082423b4b675edee3623ef 594 SUPERFAMILY SSF56235 7 585 2.12E-145 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu4722 98eaf09f48082423b4b675edee3623ef 594 Pfam PF01019 Gamma-glutamyltranspeptidase 30 585 2.2E-126 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 Gene3D G3DSA:1.10.246.130 264 384 2.5E-29 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 Gene3D G3DSA:3.60.20.40 404 593 3.5E-50 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 108 126 5.4E-27 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 126 145 5.4E-27 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 37 62 5.4E-27 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 5.4E-27 T 14-10-2018 Atu4722 98eaf09f48082423b4b675edee3623ef 594 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 404 422 5.4E-27 T 14-10-2018 Atu8184 5708457dc6537248eebd16f7900c8d68 137 Pfam PF06993 Protein of unknown function (DUF1304) 29 134 1.5E-40 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 Atu3447 e6ba0151e6f9b6ce2d5c0c4af7a13951 297 Gene3D G3DSA:3.40.50.720 6 266 2.3E-54 T 14-10-2018 Atu3447 e6ba0151e6f9b6ce2d5c0c4af7a13951 297 SUPERFAMILY SSF51735 5 270 4.65E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3447 e6ba0151e6f9b6ce2d5c0c4af7a13951 297 Gene3D G3DSA:3.90.25.10 140 268 2.3E-54 T 14-10-2018 Atu3447 e6ba0151e6f9b6ce2d5c0c4af7a13951 297 Pfam PF05368 NmrA-like family 5 220 3.1E-21 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Atu4843 759c75f44d8beaede15d9124cd6ea720 499 Gene3D G3DSA:3.40.50.300 1 240 1.1E-59 T 14-10-2018 Atu4843 759c75f44d8beaede15d9124cd6ea720 499 SMART SM00382 30 219 4.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4843 759c75f44d8beaede15d9124cd6ea720 499 SMART SM00382 281 476 0.34 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4843 759c75f44d8beaede15d9124cd6ea720 499 SUPERFAMILY SSF52540 4 229 3.73E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4843 759c75f44d8beaede15d9124cd6ea720 499 SUPERFAMILY SSF52540 256 487 7.05E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4843 759c75f44d8beaede15d9124cd6ea720 499 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4843 759c75f44d8beaede15d9124cd6ea720 499 Pfam PF00005 ABC transporter 273 426 7.7E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4843 759c75f44d8beaede15d9124cd6ea720 499 Gene3D G3DSA:3.40.50.300 258 498 2.3E-40 T 14-10-2018 Atu4843 759c75f44d8beaede15d9124cd6ea720 499 Pfam PF00005 ABC transporter 21 170 3.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3286 31f76f899c0c030458e131639676ff29 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 242 6.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3286 31f76f899c0c030458e131639676ff29 261 Gene3D G3DSA:1.10.3720.10 46 239 4.2E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu3286 31f76f899c0c030458e131639676ff29 261 SUPERFAMILY SSF161098 46 233 5.49E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu2766 22f597decb2820f556a63857b4d5c783 1585 SUPERFAMILY SSF53223 742 927 2.4E-21 T 14-10-2018 Atu2766 22f597decb2820f556a63857b4d5c783 1585 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 85 1578 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Atu2766 22f597decb2820f556a63857b4d5c783 1585 PIRSF PIRSF036761 1 1585 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Atu2766 22f597decb2820f556a63857b4d5c783 1585 SUPERFAMILY SSF51735 932 1198 5.84E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1525 2b19c15127085eaaac3bffcf97b608ef 108 Pfam PF11776 Nickel/cobalt transporter regulator 53 102 2.8E-16 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB Atu1525 2b19c15127085eaaac3bffcf97b608ef 108 Gene3D G3DSA:3.10.450.160 24 107 6.8E-11 T 14-10-2018 Atu1525 2b19c15127085eaaac3bffcf97b608ef 108 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 48 102 2.0E-15 T 14-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 SUPERFAMILY SSF50129 1 149 1.83E-39 T 14-10-2018 IPR011032 GroES-like superfamily Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 Gene3D G3DSA:3.40.50.720 124 284 2.6E-95 T 14-10-2018 Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 SMART SM00829 10 316 3.2E-36 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 SUPERFAMILY SSF51735 116 285 6.9E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 103 1.7E-12 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 Gene3D G3DSA:3.90.180.10 8 313 2.6E-95 T 14-10-2018 Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Atu5188 8e3c4dd019fa6b3b0c8b2c1d5929662d 328 Pfam PF13602 Zinc-binding dehydrogenase 187 315 2.4E-25 T 14-10-2018 Atu1697 9c478adc331bbda80bdb67d346a8fa5d 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu1697 9c478adc331bbda80bdb67d346a8fa5d 399 Gene3D G3DSA:1.20.1720.10 15 391 5.9E-80 T 14-10-2018 Atu1697 9c478adc331bbda80bdb67d346a8fa5d 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 15 392 1.6E-62 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Atu1697 9c478adc331bbda80bdb67d346a8fa5d 399 SUPERFAMILY SSF103473 9 394 5.1E-55 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1697 9c478adc331bbda80bdb67d346a8fa5d 399 Pfam PF07690 Major Facilitator Superfamily 20 357 1.6E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 SMART SM00481 4 71 1.4E-10 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 Pfam PF14579 Helix-hairpin-helix motif 767 859 1.1E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 Gene3D G3DSA:3.20.20.140 1 249 1.7E-59 T 14-10-2018 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 982 7.1E-167 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1085 13.821 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 Pfam PF02811 PHP domain 5 117 3.5E-9 T 14-10-2018 IPR004013 PHP domain GO:0003824 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 Gene3D G3DSA:1.10.150.870 748 845 3.0E-5 T 14-10-2018 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 694 1.3E-147 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu5100 390cfc3917f2026db32bcc832f3b4a43 1085 SUPERFAMILY SSF89550 10 243 1.14E-7 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 202 1.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 218 1.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 230 1.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 SUPERFAMILY SSF46894 175 243 3.4E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 Gene3D G3DSA:1.10.10.10 120 251 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 ProSitePatterns PS00622 LuxR-type HTH domain signature. 202 229 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 Pfam PF00196 Bacterial regulatory proteins, luxR family 187 240 2.4E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3318 d5b60dcc1f8ab1403b15e1b1301dc3e5 256 SMART SM00421 185 242 2.9E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 SUPERFAMILY SSF56042 199 423 1.14E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Pfam PF00586 AIR synthase related protein, N-terminal domain 451 555 3.4E-19 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 189 9.8E-24 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 SUPERFAMILY SSF55326 15 196 1.64E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Gene3D G3DSA:3.90.650.10 564 737 9.2E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Gene3D G3DSA:3.30.1330.10 45 194 7.2E-128 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 PIRSF PIRSF001587 4 738 1.0E-278 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 19 735 4.7E-291 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Gene3D G3DSA:3.90.650.10 31 367 7.2E-128 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 SUPERFAMILY SSF55326 387 561 6.28E-50 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 SUPERFAMILY SSF56042 567 735 5.68E-32 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Gene3D G3DSA:3.30.1330.10 389 558 3.5E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 744 323.391 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Pfam PF02769 AIR synthase related protein, C-terminal domain 204 354 1.2E-30 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Atu1850 33945d54e196385e1d29f0e8fad8b6b7 744 Pfam PF02769 AIR synthase related protein, C-terminal domain 571 707 2.7E-17 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 Gene3D G3DSA:3.90.1150.10 359 461 3.5E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 Gene3D G3DSA:3.40.640.10 155 358 3.5E-50 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 6.7E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 SUPERFAMILY SSF46785 11 82 3.4E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 SUPERFAMILY SSF53383 72 463 1.21E-60 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 Pfam PF00155 Aminotransferase class I and II 157 452 9.0E-20 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 Gene3D G3DSA:1.10.10.10 13 116 6.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1848 2a9c39d4f2a31c19e072acb4a661b0f4 472 SMART SM00345 19 78 4.4E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0946 0158be2c93da28a9f3e5bb5f4b0f5650 366 Gene3D G3DSA:3.30.360.10 123 310 2.3E-72 T 14-10-2018 Atu0946 0158be2c93da28a9f3e5bb5f4b0f5650 366 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 122 346 1.5E-18 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Atu0946 0158be2c93da28a9f3e5bb5f4b0f5650 366 Gene3D G3DSA:3.40.50.720 4 344 2.3E-72 T 14-10-2018 Atu0946 0158be2c93da28a9f3e5bb5f4b0f5650 366 SUPERFAMILY SSF55347 123 360 3.47E-65 T 14-10-2018 Atu0946 0158be2c93da28a9f3e5bb5f4b0f5650 366 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 111 6.4E-23 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Atu0946 0158be2c93da28a9f3e5bb5f4b0f5650 366 SUPERFAMILY SSF51735 1 174 2.54E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1943 565255d072ec937c4e3f103824ff5e2b 278 SUPERFAMILY SSF50104 127 272 1.68E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atu1943 565255d072ec937c4e3f103824ff5e2b 278 SUPERFAMILY SSF50249 2 122 2.02E-45 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1943 565255d072ec937c4e3f103824ff5e2b 278 Gene3D G3DSA:4.10.950.10 198 275 1.4E-34 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 Gene3D G3DSA:2.40.50.140 1 114 5.0E-45 T 14-10-2018 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-31 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 1.6E-123 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 SMART SM01382 125 253 5.3E-88 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 SMART SM01383 42 118 2.4E-44 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.695 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 PIRSF PIRSF002158 7 276 5.5E-98 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 2.1E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Atu1943 565255d072ec937c4e3f103824ff5e2b 278 Gene3D G3DSA:2.30.30.30 119 197 2.8E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atu3613 5f7f07cf90a4f442f6e7e4f713f2bfe2 253 Gene3D G3DSA:3.40.50.150 23 198 4.7E-21 T 14-10-2018 Atu3613 5f7f07cf90a4f442f6e7e4f713f2bfe2 253 SUPERFAMILY SSF53335 87 214 4.22E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3613 5f7f07cf90a4f442f6e7e4f713f2bfe2 253 Pfam PF08241 Methyltransferase domain 87 130 4.9E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu0281 69213a923ccc64fb530d590307a83662 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.6E-5 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.6E-5 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.6E-5 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 Pfam PF00958 GMP synthase C terminal domain 433 524 6.7E-42 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Atu0281 69213a923ccc64fb530d590307a83662 525 Pfam PF00117 Glutamine amidotransferase class-I 12 195 1.3E-37 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu0281 69213a923ccc64fb530d590307a83662 525 Gene3D G3DSA:3.40.50.620 206 405 5.3E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0281 69213a923ccc64fb530d590307a83662 525 Gene3D G3DSA:3.30.300.10 406 525 9.8E-51 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 53.259 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Atu0281 69213a923ccc64fb530d590307a83662 525 Pfam PF03054 tRNA methyl transferase 224 254 6.5E-5 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 Gene3D G3DSA:3.40.50.880 7 205 2.8E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0281 69213a923ccc64fb530d590307a83662 525 SUPERFAMILY SSF52402 192 418 2.01E-58 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 SUPERFAMILY SSF54810 405 525 4.58E-51 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 6.1E-6 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 6.1E-6 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 6.1E-6 T 14-10-2018 Atu0281 69213a923ccc64fb530d590307a83662 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 199 1.6E-67 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Atu0281 69213a923ccc64fb530d590307a83662 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 211 525 2.6E-141 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Atu0281 69213a923ccc64fb530d590307a83662 525 SUPERFAMILY SSF52317 9 232 1.23E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3980 c716c1dde64ad8d6289ddc1d4b63ad01 229 SUPERFAMILY SSF52499 2 208 7.59E-42 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu3980 c716c1dde64ad8d6289ddc1d4b63ad01 229 Gene3D G3DSA:3.40.50.850 2 209 1.2E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu3980 c716c1dde64ad8d6289ddc1d4b63ad01 229 Pfam PF00857 Isochorismatase family 13 170 2.1E-24 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 SMART SM00347 40 140 5.5E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 Gene3D G3DSA:1.10.10.10 22 156 6.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 Pfam PF12802 MarR family 46 103 1.3E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 SUPERFAMILY SSF46785 40 155 4.42E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 SUPERFAMILY SSF55729 179 312 1.3E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 Pfam PF00583 Acetyltransferase (GNAT) family 203 300 2.2E-11 T 14-10-2018 IPR000182 GNAT domain Atu3873 a95f75e537abbe9fb5fd12cbf8a47702 326 Gene3D G3DSA:3.40.630.30 166 319 1.0E-21 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Pfam PF00122 E1-E2 ATPase 253 432 1.1E-42 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 173 738 2.7E-167 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 SUPERFAMILY SSF56784 451 736 3.34E-43 T 14-10-2018 IPR036412 HAD-like superfamily Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 221 739 2.0E-103 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 593 7.8E-15 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 453 467 7.8E-15 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 671 7.8E-15 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 7.8E-15 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 7.8E-15 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Gene3D G3DSA:2.70.150.20 246 357 1.2E-21 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 SUPERFAMILY SSF55008 35 111 6.68E-14 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 SUPERFAMILY SSF81653 258 352 2.09E-15 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 ProSitePatterns PS01047 Heavy-metal-associated domain. 44 73 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 722 6.8E-67 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Gene3D G3DSA:3.30.70.100 40 110 1.0E-14 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 455 461 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Gene3D G3DSA:3.40.50.1000 433 675 3.6E-63 T 14-10-2018 IPR023214 HAD superfamily Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00943 Copper-transporting ATPase signature 376 390 3.1E-7 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00943 Copper-transporting ATPase signature 242 260 3.1E-7 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00943 Copper-transporting ATPase signature 222 241 3.1E-7 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00943 Copper-transporting ATPase signature 54 68 3.1E-7 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00943 Copper-transporting ATPase signature 436 451 3.1E-7 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 PRINTS PR00943 Copper-transporting ATPase signature 613 630 3.1E-7 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 191 738 1.6E-157 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 SUPERFAMILY SSF81665 198 703 9.94E-17 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Pfam PF00702 haloacid dehalogenase-like hydrolase 449 649 5.2E-35 T 14-10-2018 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Pfam PF00403 Heavy-metal-associated domain 42 105 3.4E-7 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu1528 784a98d7f8f1c93b15c424b6d34f00a3 763 Gene3D G3DSA:3.40.1110.10 463 568 3.6E-63 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atu6164 666a729269d7cd9680138ebb287e33f4 243 PIRSF PIRSF000507 1 240 4.5E-103 T 14-10-2018 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 Atu6164 666a729269d7cd9680138ebb287e33f4 243 Pfam PF01745 Isopentenyl transferase 2 229 5.2E-109 T 14-10-2018 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 Atu6164 666a729269d7cd9680138ebb287e33f4 243 Gene3D G3DSA:3.40.50.300 1 124 4.6E-55 T 14-10-2018 Atu6164 666a729269d7cd9680138ebb287e33f4 243 Gene3D G3DSA:1.10.287.890 125 226 1.2E-42 T 14-10-2018 Atu6164 666a729269d7cd9680138ebb287e33f4 243 SUPERFAMILY SSF52540 2 105 8.78E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0252 55dbbc29df1078e23e9b0d125b6a9575 171 Gene3D G3DSA:3.10.620.30 38 168 3.8E-26 T 14-10-2018 Atu0252 55dbbc29df1078e23e9b0d125b6a9575 171 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 4 163 7.4E-67 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Atu2513 a4c19a93552f810bd2d52e621b28b4fa 503 SUPERFAMILY SSF56601 23 330 1.9E-51 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu2513 a4c19a93552f810bd2d52e621b28b4fa 503 Pfam PF00144 Beta-lactamase 20 322 2.9E-36 T 14-10-2018 IPR001466 Beta-lactamase-related Atu2513 a4c19a93552f810bd2d52e621b28b4fa 503 Gene3D G3DSA:3.40.710.10 22 337 2.7E-50 T 14-10-2018 Atu0342 e10e0c29c1b9390e4f3f68720220e9da 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 99 114 4.7E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atu0342 e10e0c29c1b9390e4f3f68720220e9da 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 4.7E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atu0342 e10e0c29c1b9390e4f3f68720220e9da 162 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 135 151 4.7E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atu0342 e10e0c29c1b9390e4f3f68720220e9da 162 TIGRFAM TIGR00077 lspA: signal peptidase II 8 162 6.7E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atu0342 e10e0c29c1b9390e4f3f68720220e9da 162 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 160 15.392 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atu0342 e10e0c29c1b9390e4f3f68720220e9da 162 Pfam PF01252 Signal peptidase (SPase) II 17 154 9.3E-34 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Atu4261 02b54fb3beb01fbbae10736f8392322e 273 SMART SM00382 44 224 2.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4261 02b54fb3beb01fbbae10736f8392322e 273 Pfam PF00005 ABC transporter 36 174 2.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4261 02b54fb3beb01fbbae10736f8392322e 273 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4261 02b54fb3beb01fbbae10736f8392322e 273 SUPERFAMILY SSF52540 19 240 1.14E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4261 02b54fb3beb01fbbae10736f8392322e 273 Gene3D G3DSA:3.40.50.300 12 239 1.2E-66 T 14-10-2018 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 Hamap MF_00568 Quinolinate synthase A [nadA]. 49 345 44.115 T 14-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 Gene3D G3DSA:3.40.50.10800 53 326 2.1E-111 T 14-10-2018 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 Gene3D G3DSA:3.40.50.10800 134 343 2.1E-111 T 14-10-2018 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 Gene3D G3DSA:3.40.50.10800 217 301 2.1E-111 T 14-10-2018 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 Pfam PF02445 Quinolinate synthetase A protein 54 344 1.8E-111 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 50 345 1.4E-96 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atu4098 5a5ae410b383b3634cc0c311cc3e8f07 345 SUPERFAMILY SSF142754 51 345 5.49E-110 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atu3729 d8f774921019d577be5658ef5b676d8c 217 Pfam PF13483 Beta-lactamase superfamily domain 2 171 3.7E-47 T 14-10-2018 Atu3729 d8f774921019d577be5658ef5b676d8c 217 SUPERFAMILY SSF56281 2 176 4.66E-11 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu3729 d8f774921019d577be5658ef5b676d8c 217 Gene3D G3DSA:3.60.15.10 1 211 7.5E-24 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5491 673c1956fdf9998b50c142d22952dffa 713 SUPERFAMILY SSF52317 552 696 2.11E-14 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5491 673c1956fdf9998b50c142d22952dffa 713 Gene3D G3DSA:2.40.180.10 2 447 5.6E-198 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PRINTS PR00067 Catalase signature 116 134 2.0E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PRINTS PR00067 Catalase signature 53 76 2.0E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PRINTS PR00067 Catalase signature 325 352 2.0E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PRINTS PR00067 Catalase signature 357 383 2.0E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PRINTS PR00067 Catalase signature 137 154 2.0E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PRINTS PR00067 Catalase signature 156 174 2.0E-64 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 Pfam PF00199 Catalase 40 425 3.1E-174 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 ProSitePatterns PS00438 Catalase proximal active site signature. 76 92 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 Pfam PF06628 Catalase-related immune-responsive 453 516 7.1E-22 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 SUPERFAMILY SSF56634 31 527 9.16E-209 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 PIRSF PIRSF038927 15 703 2.5E-297 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Atu5491 673c1956fdf9998b50c142d22952dffa 713 Gene3D G3DSA:3.40.50.880 553 703 2.1E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5491 673c1956fdf9998b50c142d22952dffa 713 SMART SM01060 40 428 3.6E-261 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu5491 673c1956fdf9998b50c142d22952dffa 713 Gene3D G3DSA:1.20.1370.20 450 550 8.7E-34 T 14-10-2018 Atu5491 673c1956fdf9998b50c142d22952dffa 713 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 370 378 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 SUPERFAMILY SSF56553 54 175 8.89E-45 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Gene3D G3DSA:2.170.120.12 54 174 9.7E-87 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 316 36.616 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 327 3.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Gene3D G3DSA:3.30.1360.10 19 225 9.7E-87 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 225 2.3E-22 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 25 316 3.2E-120 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Gene3D G3DSA:1.10.150.20 244 328 6.5E-37 T 14-10-2018 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 SUPERFAMILY SSF55257 6 230 2.55E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 SUPERFAMILY SSF47789 249 325 1.24E-26 T 14-10-2018 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 SMART SM00662 24 231 7.2E-104 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 307 3.9E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1923 316dbd1eaa16a6d51beeb9254ab8fc8c 336 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.1E-25 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu3360 6a5b8268a3cb0a6a16fdcdca9e0f8cbb 271 Pfam PF00005 ABC transporter 34 184 5.5E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3360 6a5b8268a3cb0a6a16fdcdca9e0f8cbb 271 SMART SM00382 43 232 1.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3360 6a5b8268a3cb0a6a16fdcdca9e0f8cbb 271 PIRSF PIRSF039085 15 259 3.6E-101 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu3360 6a5b8268a3cb0a6a16fdcdca9e0f8cbb 271 SUPERFAMILY SSF52540 18 253 6.05E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3360 6a5b8268a3cb0a6a16fdcdca9e0f8cbb 271 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3360 6a5b8268a3cb0a6a16fdcdca9e0f8cbb 271 Gene3D G3DSA:3.40.50.300 14 260 3.3E-77 T 14-10-2018 Atu0326 286f1aa7132371b5db681c1e944a342f 214 Gene3D G3DSA:3.90.950.10 1 214 2.7E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atu0326 286f1aa7132371b5db681c1e944a342f 214 SUPERFAMILY SSF52972 5 212 1.65E-62 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atu0326 286f1aa7132371b5db681c1e944a342f 214 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 210 8.0E-48 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Atu0326 286f1aa7132371b5db681c1e944a342f 214 Pfam PF01725 Ham1 family 9 209 1.8E-52 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Atu0326 286f1aa7132371b5db681c1e944a342f 214 Hamap MF_01405 dITP/XTP pyrophosphatase. 7 213 45.026 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 Pfam PF00491 Arginase family 2 294 8.6E-69 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 ProSitePatterns PS01053 Arginase family signature. 224 245 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 SUPERFAMILY SSF52768 1 302 1.8E-83 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 PRINTS PR00116 Arginase signature 92 107 5.3E-49 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 PRINTS PR00116 Arginase signature 172 190 5.3E-49 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 PRINTS PR00116 Arginase signature 221 250 5.3E-49 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 PRINTS PR00116 Arginase signature 256 270 5.3E-49 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 PRINTS PR00116 Arginase signature 119 146 5.3E-49 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 TIGRFAM TIGR01229 rocF_arginase: arginase 5 298 4.1E-92 T 14-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 Atu4007 2b0f2098eee8e9d19251a084ef810dfb 306 Gene3D G3DSA:3.40.800.10 1 304 1.5E-83 T 14-10-2018 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 7.6E-32 T 14-10-2018 IPR000362 Fumarate lyase family Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 7.6E-32 T 14-10-2018 IPR000362 Fumarate lyase family Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 7.6E-32 T 14-10-2018 IPR000362 Fumarate lyase family Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 7.6E-32 T 14-10-2018 IPR000362 Fumarate lyase family Atu1616 42198d95c231d1005404e1fdf7183ca2 463 Pfam PF10415 Fumarase C C-terminus 408 461 1.5E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 Pfam PF00206 Lyase 12 342 1.4E-110 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Atu1616 42198d95c231d1005404e1fdf7183ca2 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 461 1.3E-222 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 90.999 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 Gene3D G3DSA:1.10.275.10 5 138 2.8E-57 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Atu1616 42198d95c231d1005404e1fdf7183ca2 463 SUPERFAMILY SSF48557 4 462 6.28E-149 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 Gene3D G3DSA:1.10.40.30 408 463 1.3E-24 T 14-10-2018 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 5.7E-5 T 14-10-2018 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 5.7E-5 T 14-10-2018 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 5.7E-5 T 14-10-2018 Atu1616 42198d95c231d1005404e1fdf7183ca2 463 Gene3D G3DSA:1.20.200.10 139 406 1.4E-118 T 14-10-2018 Atu6117 26e7607d878bad39fc00e4043c399410 161 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu6117 26e7607d878bad39fc00e4043c399410 161 Gene3D G3DSA:3.90.79.10 8 141 5.3E-27 T 14-10-2018 Atu6117 26e7607d878bad39fc00e4043c399410 161 Pfam PF00293 NUDIX domain 10 123 5.7E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu6117 26e7607d878bad39fc00e4043c399410 161 SUPERFAMILY SSF55811 8 140 1.35E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu3705 ffb94d0019d7f71c979f337042eaf358 215 SMART SM00978 69 213 3.5E-33 T 14-10-2018 IPR007379 Tim44-like domain Atu3705 ffb94d0019d7f71c979f337042eaf358 215 SUPERFAMILY SSF54427 88 213 3.29E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu3705 ffb94d0019d7f71c979f337042eaf358 215 Pfam PF04280 Tim44-like domain 88 213 3.8E-32 T 14-10-2018 IPR007379 Tim44-like domain Atu3705 ffb94d0019d7f71c979f337042eaf358 215 Gene3D G3DSA:3.10.450.240 87 215 2.0E-18 T 14-10-2018 Atu0485 df5dd41f9c35dc590c0b7204e4a4f978 117 SUPERFAMILY SSF56399 7 115 4.03E-38 T 14-10-2018 Atu0485 df5dd41f9c35dc590c0b7204e4a4f978 117 Pfam PF06108 Protein of unknown function (DUF952) 11 99 2.0E-30 T 14-10-2018 IPR009297 Protein of unknown function DUF952 Atu0485 df5dd41f9c35dc590c0b7204e4a4f978 117 Gene3D G3DSA:3.20.170.20 6 117 1.1E-37 T 14-10-2018 Atu1523 ff5e7785162d706a69a5db83312d6f50 827 Gene3D G3DSA:2.60.40.10 195 288 1.7E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu1523 ff5e7785162d706a69a5db83312d6f50 827 SUPERFAMILY SSF49303 195 292 3.45E-15 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Atu1523 ff5e7785162d706a69a5db83312d6f50 827 Pfam PF00703 Glycosyl hydrolases family 2 249 292 9.8E-7 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Atu1523 ff5e7785162d706a69a5db83312d6f50 827 SUPERFAMILY SSF49785 7 190 2.72E-46 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Atu1523 ff5e7785162d706a69a5db83312d6f50 827 SUPERFAMILY SSF49303 736 810 2.45E-12 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Atu1523 ff5e7785162d706a69a5db83312d6f50 827 Gene3D G3DSA:2.60.40.10 731 814 8.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu1523 ff5e7785162d706a69a5db83312d6f50 827 Gene3D G3DSA:2.60.120.260 9 194 6.9E-48 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Atu1523 ff5e7785162d706a69a5db83312d6f50 827 SUPERFAMILY SSF51445 289 637 1.21E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu1523 ff5e7785162d706a69a5db83312d6f50 827 Gene3D G3DSA:3.20.20.80 289 635 6.8E-123 T 14-10-2018 Atu8067 8924d41adb0589d7eb853435bf998bc8 41 SUPERFAMILY SSF57840 1 41 8.5E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8067 8924d41adb0589d7eb853435bf998bc8 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.175 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8067 8924d41adb0589d7eb853435bf998bc8 41 Pfam PF00444 Ribosomal protein L36 1 41 2.0E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8067 8924d41adb0589d7eb853435bf998bc8 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 6.5E-6 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8067 8924d41adb0589d7eb853435bf998bc8 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1380 9de6a614704207d1f5198d2de2a0410e 377 Pfam PF02163 Peptidase family M50 18 363 5.9E-81 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Atu1380 9de6a614704207d1f5198d2de2a0410e 377 Pfam PF13180 PDZ domain 147 208 1.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu1380 9de6a614704207d1f5198d2de2a0410e 377 SMART SM00228 135 203 4.4E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu1380 9de6a614704207d1f5198d2de2a0410e 377 Gene3D G3DSA:2.30.42.10 144 238 1.8E-21 T 14-10-2018 Atu1380 9de6a614704207d1f5198d2de2a0410e 377 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 145 375 1.9E-54 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Atu1380 9de6a614704207d1f5198d2de2a0410e 377 SUPERFAMILY SSF50156 118 209 1.58E-18 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu2738 6a43eb4f2308d76c6f4bea07d3afe631 328 Gene3D G3DSA:3.90.25.10 179 316 6.6E-127 T 14-10-2018 Atu2738 6a43eb4f2308d76c6f4bea07d3afe631 328 SUPERFAMILY SSF51735 1 321 6.06E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2738 6a43eb4f2308d76c6f4bea07d3afe631 328 Gene3D G3DSA:3.40.50.720 6 306 6.6E-127 T 14-10-2018 Atu2738 6a43eb4f2308d76c6f4bea07d3afe631 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 206 3.8E-18 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 Pfam PF02541 Ppx/GppA phosphatase family 35 308 3.2E-44 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 Gene3D G3DSA:1.10.3210.10 307 507 1.4E-69 T 14-10-2018 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 Gene3D G3DSA:3.30.420.40 1 119 4.8E-40 T 14-10-2018 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 SUPERFAMILY SSF109604 329 505 4.08E-10 T 14-10-2018 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 SUPERFAMILY SSF53067 139 309 2.01E-33 T 14-10-2018 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 16 307 4.6E-99 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 Gene3D G3DSA:3.30.420.150 120 306 3.5E-65 T 14-10-2018 Atu1145 e83cce7e792ebccfe0a49dd62f3875f9 507 SUPERFAMILY SSF53067 16 135 9.39E-33 T 14-10-2018 Atu3059 2f904601dceae8ce10b961d1395fdbd8 527 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 10 521 3.9E-92 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 Atu3059 2f904601dceae8ce10b961d1395fdbd8 527 Pfam PF00999 Sodium/hydrogen exchanger family 12 404 9.9E-53 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Atu4311 9c55e8f57ae8badf77b1c6f87c81ab05 106 Gene3D G3DSA:3.30.2270.10 1 100 5.0E-35 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4311 9c55e8f57ae8badf77b1c6f87c81ab05 106 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 87 6.6E-39 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4311 9c55e8f57ae8badf77b1c6f87c81ab05 106 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 84 9.8E-33 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 Gene3D G3DSA:3.40.190.290 96 297 1.7E-33 T 14-10-2018 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 3.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 Gene3D G3DSA:1.10.10.10 10 90 3.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 Pfam PF03466 LysR substrate binding domain 95 298 9.6E-31 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 SUPERFAMILY SSF53850 95 301 4.71E-34 T 14-10-2018 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2191 e94e4a9d248050eddffb4fb6ae3131d7 314 SUPERFAMILY SSF46785 7 116 2.95E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 Gene3D G3DSA:1.50.10.10 279 706 6.3E-157 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 SUPERFAMILY SSF48208 253 688 1.3E-88 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 TIGRFAM TIGR01535 glucan_glucosid: glucan 1,4-alpha-glucosidase 34 702 0.0 T 14-10-2018 IPR006425 Glucoamylase, bacterial KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 Gene3D G3DSA:2.70.98.10 3 273 3.8E-90 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 Pfam PF09137 Glucodextranase, domain N 8 272 5.4E-94 T 14-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 Pfam PF00723 Glycosyl hydrolases family 15 375 619 2.8E-19 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 SUPERFAMILY SSF74650 3 275 6.28E-98 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu4833 777d43e64e224a0d5cfdf552554ed0b4 800 ProSitePatterns PS00820 Glucoamylase active site region signature. 431 441 - T 14-10-2018 IPR000165 Glucoamylase GO:0004339|GO:0005976 KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 Atu4480 4d07842483479f7179ca29be82aac2b0 215 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 16 215 2.8E-76 T 14-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent Atu4480 4d07842483479f7179ca29be82aac2b0 215 SUPERFAMILY SSF50475 30 144 3.1E-17 T 14-10-2018 Atu4480 4d07842483479f7179ca29be82aac2b0 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 129 2.6E-16 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu4480 4d07842483479f7179ca29be82aac2b0 215 Gene3D G3DSA:2.30.110.10 36 162 8.7E-25 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 166 2.9E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 Gene3D G3DSA:1.10.1740.10 2 76 4.5E-18 T 14-10-2018 Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 SUPERFAMILY SSF88946 15 99 2.55E-15 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 Gene3D G3DSA:1.10.10.10 104 168 7.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 Pfam PF04542 Sigma-70 region 2 23 85 3.1E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 SUPERFAMILY SSF88659 103 166 5.45E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu2030 ddad29aa9fc1fed8a75b7edad36b5cb0 178 Pfam PF08281 Sigma-70, region 4 111 162 1.6E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu1239 8beb1ba1190784084eb514a2e15dce75 753 Pfam PF02706 Chain length determinant protein 12 104 5.8E-12 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Atu1239 8beb1ba1190784084eb514a2e15dce75 753 Gene3D G3DSA:3.40.50.300 517 736 1.2E-14 T 14-10-2018 Atu1239 8beb1ba1190784084eb514a2e15dce75 753 SUPERFAMILY SSF52540 579 720 8.41E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0198 8ba466bad150189a5fb6fd3027c46685 381 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 187 365 5.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0198 8ba466bad150189a5fb6fd3027c46685 381 SUPERFAMILY SSF161098 164 359 4.19E-31 T 14-10-2018 IPR035906 MetI-like superfamily Atu0198 8ba466bad150189a5fb6fd3027c46685 381 Gene3D G3DSA:1.10.3720.10 160 369 1.9E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu0769 c5c582e71f683b5e16e5fe5c2acc599b 317 Gene3D G3DSA:1.10.357.140 32 185 2.3E-17 T 14-10-2018 Atu0769 c5c582e71f683b5e16e5fe5c2acc599b 317 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 21 305 19.574 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Atu0769 c5c582e71f683b5e16e5fe5c2acc599b 317 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 75 97 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site Atu0769 c5c582e71f683b5e16e5fe5c2acc599b 317 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 23 303 8.5E-96 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Atu0769 c5c582e71f683b5e16e5fe5c2acc599b 317 Pfam PF01040 UbiA prenyltransferase family 37 277 4.3E-58 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Atu4697 0bbb80a602c04ec5ffb5306e1b1328ac 315 Gene3D G3DSA:1.10.3720.10 92 312 1.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu4697 0bbb80a602c04ec5ffb5306e1b1328ac 315 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 63 6.3E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu4697 0bbb80a602c04ec5ffb5306e1b1328ac 315 SUPERFAMILY SSF161098 98 298 3.14E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu4697 0bbb80a602c04ec5ffb5306e1b1328ac 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 315 3.3E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 SUPERFAMILY SSF51905 1 336 2.36E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 3.5E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.0E-6 T 14-10-2018 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 7.0E-6 T 14-10-2018 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 7.0E-6 T 14-10-2018 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 2.1E-7 T 14-10-2018 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.1E-7 T 14-10-2018 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 2.1E-7 T 14-10-2018 Atu2023 a1b95ea54be69d21b1fcbf23fc1fd807 421 Gene3D G3DSA:3.50.50.100 1 396 6.9E-121 T 14-10-2018 Atu1271 01f63ad504e7babae551c0321fd86b8e 142 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 113 3.7E-13 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Atu1271 01f63ad504e7babae551c0321fd86b8e 142 Gene3D G3DSA:2.170.150.70 9 127 3.3E-15 T 14-10-2018 Atu1271 01f63ad504e7babae551c0321fd86b8e 142 SUPERFAMILY SSF51316 5 128 1.04E-34 T 14-10-2018 IPR011057 Mss4-like superfamily Atu2713 b8f7cfaf6ce9ef745edf21ad0ebddc70 541 Gene3D G3DSA:1.10.3720.10 291 532 2.4E-14 T 14-10-2018 IPR035906 MetI-like superfamily Atu2713 b8f7cfaf6ce9ef745edf21ad0ebddc70 541 SUPERFAMILY SSF161098 295 525 4.91E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu2713 b8f7cfaf6ce9ef745edf21ad0ebddc70 541 Gene3D G3DSA:1.10.3720.10 9 266 6.1E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu2713 b8f7cfaf6ce9ef745edf21ad0ebddc70 541 SUPERFAMILY SSF161098 9 260 2.15E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu2713 b8f7cfaf6ce9ef745edf21ad0ebddc70 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 260 2.7E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 SUPERFAMILY SSF53383 10 420 3.71E-179 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 PIRSF PIRSF000412 1 422 2.6E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 Pfam PF00464 Serine hydroxymethyltransferase 11 385 2.6E-172 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 421 52.52 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 Gene3D G3DSA:3.40.640.10 37 288 4.3E-180 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu4314 d6b81122d6c43ccdb2f2eaba9e889816 422 Gene3D G3DSA:3.90.1150.10 12 395 4.3E-180 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3738 307d5e2da061acc58f3084bda45ae583 621 Gene3D G3DSA:1.20.1530.20 6 390 7.4E-16 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu3738 307d5e2da061acc58f3084bda45ae583 621 Pfam PF00999 Sodium/hydrogen exchanger family 12 387 6.7E-48 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Atu1877 6baa9c7708f446db17835bedb3dd6801 746 SUPERFAMILY SSF103088 621 734 2.88E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu1877 6baa9c7708f446db17835bedb3dd6801 746 Gene3D G3DSA:3.30.1330.60 607 740 2.1E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu1877 6baa9c7708f446db17835bedb3dd6801 746 Pfam PF00691 OmpA family 631 728 7.4E-19 T 14-10-2018 IPR006665 OmpA-like domain Atu1877 6baa9c7708f446db17835bedb3dd6801 746 PRINTS PR01021 OMPA domain signature 666 681 1.5E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu1877 6baa9c7708f446db17835bedb3dd6801 746 PRINTS PR01021 OMPA domain signature 681 697 1.5E-5 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF54211 297 469 6.07E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 2.8E-13 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF03725 3' exoribonuclease family, domain 2 461 528 3.9E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 30.803 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atu0082 b115c813a4cda3035479164bc5140742 713 Gene3D G3DSA:3.30.230.70 1 230 1.3E-88 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF00013 KH domain 557 614 2.3E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF01138 3' exoribonuclease family, domain 1 13 144 6.1E-24 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.8E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF54211 2 144 1.42E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0082 b115c813a4cda3035479164bc5140742 713 Gene3D G3DSA:2.40.50.140 623 695 1.6E-30 T 14-10-2018 Atu0082 b115c813a4cda3035479164bc5140742 713 Gene3D G3DSA:3.30.1370.10 551 622 6.3E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF55666 451 546 2.24E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 SMART SM00316 621 691 2.3E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 Atu0082 b115c813a4cda3035479164bc5140742 713 SMART SM00322 553 618 1.7E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF46915 240 322 1.31E-17 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 321 4.9E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atu0082 b115c813a4cda3035479164bc5140742 713 Gene3D G3DSA:3.30.230.70 231 550 6.3E-116 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF55666 145 235 2.52E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF54791 556 641 1.55E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Atu0082 b115c813a4cda3035479164bc5140742 713 Pfam PF00575 S1 RNA binding domain 619 691 3.9E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 Atu0082 b115c813a4cda3035479164bc5140742 713 SUPERFAMILY SSF50249 621 703 1.85E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0082 b115c813a4cda3035479164bc5140742 713 PIRSF PIRSF005499 1 713 4.7E-300 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Atu0305 55eb09d73df87218f4d9887649f53bef 432 SUPERFAMILY SSF53850 24 420 3.42E-65 T 14-10-2018 Atu0305 55eb09d73df87218f4d9887649f53bef 432 Pfam PF13416 Bacterial extracellular solute-binding protein 42 354 8.4E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu0305 55eb09d73df87218f4d9887649f53bef 432 Gene3D G3DSA:3.40.190.10 27 378 1.2E-104 T 14-10-2018 Atu0305 55eb09d73df87218f4d9887649f53bef 432 Gene3D G3DSA:3.40.190.10 143 416 1.2E-104 T 14-10-2018 Atu4764 fdb0951860436e7afbe890134c820bf2 186 Pfam PF13302 Acetyltransferase (GNAT) domain 13 153 2.8E-24 T 14-10-2018 IPR000182 GNAT domain Atu4764 fdb0951860436e7afbe890134c820bf2 186 Gene3D G3DSA:3.40.630.30 5 185 1.0E-41 T 14-10-2018 Atu4764 fdb0951860436e7afbe890134c820bf2 186 SUPERFAMILY SSF55729 8 178 1.63E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82866 798 1019 1.2E-49 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 Pfam PF00873 AcrB/AcrD/AcrF family 5 1014 5.1E-265 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82714 709 795 2.35E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82693 562 655 9.42E-12 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82714 182 264 1.57E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:3.30.70.1430 563 656 0.0 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:3.30.2090.10 705 800 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:3.30.70.1440 657 857 0.0 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-63 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:1.20.1640.10 10 508 0.0 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:1.20.1640.10 509 1013 0.0 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 Gene3D G3DSA:3.30.70.1430 40 808 0.0 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82693 40 132 5.41E-25 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82866 289 490 1.06E-45 T 14-10-2018 Atu4636 84087e366ba53995a31cdb52282600ec 1048 SUPERFAMILY SSF82693 137 324 1.75E-16 T 14-10-2018 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 Gene3D G3DSA:2.40.50.100 261 345 6.8E-11 T 14-10-2018 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 Pfam PF08402 TOBE domain 271 341 5.8E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 SMART SM00382 28 211 8.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4211 b855f0173757c57ab0df9236f0b18a70 370 SUPERFAMILY SSF50331 236 349 4.37E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4211 b855f0173757c57ab0df9236f0b18a70 370 Gene3D G3DSA:2.40.50.140 273 334 6.8E-11 T 14-10-2018 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 Gene3D G3DSA:3.40.50.300 1 238 1.8E-83 T 14-10-2018 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 Pfam PF00005 ABC transporter 19 161 5.4E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4211 b855f0173757c57ab0df9236f0b18a70 370 SUPERFAMILY SSF52540 4 242 3.59E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0187 0259a41cfd15cd24ca3fea15732e8ad1 614 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 109 523 2.1E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu0187 0259a41cfd15cd24ca3fea15732e8ad1 614 PIRSF PIRSF002741 2 612 2.0E-90 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu0187 0259a41cfd15cd24ca3fea15732e8ad1 614 Gene3D G3DSA:3.10.105.10 328 587 2.8E-231 T 14-10-2018 Atu0187 0259a41cfd15cd24ca3fea15732e8ad1 614 SUPERFAMILY SSF53850 59 608 3.98E-119 T 14-10-2018 Atu0187 0259a41cfd15cd24ca3fea15732e8ad1 614 Gene3D G3DSA:3.40.190.10 36 608 2.8E-231 T 14-10-2018 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 Pfam PF13377 Periplasmic binding protein-like domain 182 347 1.7E-37 T 14-10-2018 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 Gene3D G3DSA:3.40.50.2300 174 306 4.6E-56 T 14-10-2018 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 7.5E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 ProSitePatterns PS00356 LacI-type HTH domain signature. 14 32 - T 14-10-2018 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 Gene3D G3DSA:1.10.260.40 5 66 2.1E-15 T 14-10-2018 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 SUPERFAMILY SSF53822 86 352 9.62E-49 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 Gene3D G3DSA:3.40.50.2300 91 324 4.6E-56 T 14-10-2018 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 SMART SM00354 11 77 2.5E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4556 4922e70539dfd7d906b2ee06a69ca4e1 353 SUPERFAMILY SSF47413 11 60 9.09E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3435 29b5c1c15a121cb9c963b79e89b4e0c8 331 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 58 94 3.5E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu3435 29b5c1c15a121cb9c963b79e89b4e0c8 331 Gene3D G3DSA:1.10.3720.10 116 329 4.6E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu3435 29b5c1c15a121cb9c963b79e89b4e0c8 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 145 327 1.1E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3435 29b5c1c15a121cb9c963b79e89b4e0c8 331 SUPERFAMILY SSF161098 122 312 1.44E-29 T 14-10-2018 IPR035906 MetI-like superfamily Atu3117 dfc5cae7ac5e06a22fb13e052d571ddd 387 SUPERFAMILY SSF51569 57 326 6.37E-7 T 14-10-2018 Atu3117 dfc5cae7ac5e06a22fb13e052d571ddd 387 Gene3D G3DSA:3.20.20.500 1 382 6.8E-180 T 14-10-2018 Atu3117 dfc5cae7ac5e06a22fb13e052d571ddd 387 Pfam PF06187 Protein of unknown function (DUF993) 4 386 2.8E-188 T 14-10-2018 IPR009334 Protein of unknown function DUF993 Atu0019 8242386e1e53e9b9420176269d3a603a 279 SUPERFAMILY SSF51366 4 254 2.35E-88 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu0019 8242386e1e53e9b9420176269d3a603a 279 Pfam PF00290 Tryptophan synthase alpha chain 9 254 9.5E-90 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu0019 8242386e1e53e9b9420176269d3a603a 279 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 254 3.3E-74 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu0019 8242386e1e53e9b9420176269d3a603a 279 Gene3D G3DSA:3.20.20.70 1 271 2.4E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0019 8242386e1e53e9b9420176269d3a603a 279 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 269 35.067 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu0019 8242386e1e53e9b9420176269d3a603a 279 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 49 62 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Atu3906 3ecf9e4c9177c642aa7a78b7dfac9d0f 431 Gene3D G3DSA:3.40.190.10 32 404 4.4E-125 T 14-10-2018 Atu3906 3ecf9e4c9177c642aa7a78b7dfac9d0f 431 Gene3D G3DSA:3.40.190.10 118 408 4.4E-125 T 14-10-2018 Atu3906 3ecf9e4c9177c642aa7a78b7dfac9d0f 431 SUPERFAMILY SSF53850 30 276 9.23E-16 T 14-10-2018 Atu3906 3ecf9e4c9177c642aa7a78b7dfac9d0f 431 Pfam PF13379 NMT1-like family 30 285 2.7E-69 T 14-10-2018 Atu3234 0d7b410b2c0927a3353bfe74dddec72e 395 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 15 144 5.5E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3234 0d7b410b2c0927a3353bfe74dddec72e 395 Gene3D G3DSA:3.40.50.720 20 368 2.2E-136 T 14-10-2018 Atu3234 0d7b410b2c0927a3353bfe74dddec72e 395 Gene3D G3DSA:3.30.360.10 150 393 2.2E-136 T 14-10-2018 Atu3234 0d7b410b2c0927a3353bfe74dddec72e 395 SUPERFAMILY SSF55347 151 336 7.03E-34 T 14-10-2018 Atu3234 0d7b410b2c0927a3353bfe74dddec72e 395 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 157 233 3.2E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu3234 0d7b410b2c0927a3353bfe74dddec72e 395 SUPERFAMILY SSF51735 10 177 2.51E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3271 fafc7554629e0c98a97e5f29103152c9 374 Pfam PF13439 Glycosyltransferase Family 4 14 191 5.5E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu3271 fafc7554629e0c98a97e5f29103152c9 374 Gene3D G3DSA:3.40.50.2000 179 351 8.1E-35 T 14-10-2018 Atu3271 fafc7554629e0c98a97e5f29103152c9 374 Pfam PF00534 Glycosyl transferases group 1 198 339 1.5E-22 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu3271 fafc7554629e0c98a97e5f29103152c9 374 SUPERFAMILY SSF53756 1 364 3.37E-64 T 14-10-2018 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 PIRSF PIRSF000521 23 129 2.6E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 PIRSF PIRSF000521 124 432 3.3E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 Pfam PF00202 Aminotransferase class-III 27 428 5.9E-87 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 Gene3D G3DSA:3.90.1150.10 32 424 9.5E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 Gene3D G3DSA:3.40.640.10 61 324 9.5E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu5302 c9cd1576ce0e62594a0e357565ab5ca4 435 SUPERFAMILY SSF53383 4 430 1.73E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 SUPERFAMILY SSF46785 7 143 9.43E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 SMART SM00347 30 130 4.4E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 Pfam PF01047 MarR family 38 94 6.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 9.9E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0109 4cdc7adc69d5835887d7341f1dc9eccc 148 Gene3D G3DSA:1.10.10.10 4 146 5.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1498 f8345e7535d6c1fe7d14ecc9afc7cd4a 188 Hamap MF_00165 Thymidylate kinase [tmk]. 1 176 19.498 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Atu1498 f8345e7535d6c1fe7d14ecc9afc7cd4a 188 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 168 1.3E-36 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Atu1498 f8345e7535d6c1fe7d14ecc9afc7cd4a 188 ProSitePatterns PS01331 Thymidylate kinase signature. 60 72 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Atu1498 f8345e7535d6c1fe7d14ecc9afc7cd4a 188 Gene3D G3DSA:3.40.50.300 1 180 1.4E-45 T 14-10-2018 Atu1498 f8345e7535d6c1fe7d14ecc9afc7cd4a 188 Pfam PF02223 Thymidylate kinase 1 167 4.0E-32 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Atu1498 f8345e7535d6c1fe7d14ecc9afc7cd4a 188 SUPERFAMILY SSF52540 1 179 6.77E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5151 5d1d3b178ce7b318fbdb5a51a63712b1 94 SUPERFAMILY SSF46785 1 85 1.15E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5151 5d1d3b178ce7b318fbdb5a51a63712b1 94 Pfam PF01638 HxlR-like helix-turn-helix 3 85 2.2E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Atu5151 5d1d3b178ce7b318fbdb5a51a63712b1 94 Gene3D G3DSA:1.10.10.10 1 93 1.7E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5465 bd8e142120357231d3f4aa9371945616 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.0E-39 T 14-10-2018 Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 SUPERFAMILY SSF51735 7 253 4.91E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5465 bd8e142120357231d3f4aa9371945616 253 Gene3D G3DSA:3.40.50.720 1 253 1.2E-68 T 14-10-2018 Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5465 bd8e142120357231d3f4aa9371945616 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.0E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 SUPERFAMILY SSF51735 3 160 1.18E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 SUPERFAMILY SSF55347 139 304 2.03E-54 T 14-10-2018 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 Pfam PF00742 Homoserine dehydrogenase 139 316 2.4E-63 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 PIRSF PIRSF000098 2 436 3.3E-159 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 Pfam PF01842 ACT domain 355 420 1.8E-9 T 14-10-2018 IPR002912 ACT domain Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 Gene3D G3DSA:3.30.70.260 349 420 1.7E-144 T 14-10-2018 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 129 7.2E-14 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 Gene3D G3DSA:3.30.360.10 138 348 1.7E-144 T 14-10-2018 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 Gene3D G3DSA:3.40.50.720 5 340 1.7E-144 T 14-10-2018 Atu1588 7435478a20b27cb5d6e382791f0fddb4 436 SUPERFAMILY SSF55021 352 421 3.77E-8 T 14-10-2018 Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 SUPERFAMILY SSF46785 28 97 1.91E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 SUPERFAMILY SSF55781 84 269 8.5E-52 T 14-10-2018 Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 Gene3D G3DSA:1.10.10.10 25 98 4.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 SMART SM00346 26 115 5.9E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 Pfam PF01614 Bacterial transcriptional regulator 142 267 6.4E-35 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 Pfam PF09339 IclR helix-turn-helix domain 29 76 1.6E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu0706 92bd024f066c54f6cfbaa904fedeefa0 279 Gene3D G3DSA:3.30.450.40 99 275 7.3E-59 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu1960 ae88255020e31fbc19eee62ef74629b2 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 1.2E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal Atu1960 ae88255020e31fbc19eee62ef74629b2 143 Gene3D G3DSA:1.10.10.2720 73 143 1.2E-22 T 14-10-2018 Atu1960 ae88255020e31fbc19eee62ef74629b2 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 141 2.1E-19 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Atu1960 ae88255020e31fbc19eee62ef74629b2 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 5.1E-63 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1960 ae88255020e31fbc19eee62ef74629b2 143 SMART SM00649 9 142 1.1E-74 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Atu1960 ae88255020e31fbc19eee62ef74629b2 143 SUPERFAMILY SSF54747 3 72 7.72E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Atu1960 ae88255020e31fbc19eee62ef74629b2 143 Gene3D G3DSA:3.30.1550.10 2 72 5.6E-35 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Atu1960 ae88255020e31fbc19eee62ef74629b2 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-17 T 14-10-2018 Atu1960 ae88255020e31fbc19eee62ef74629b2 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 143 29.339 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Atu1960 ae88255020e31fbc19eee62ef74629b2 143 SUPERFAMILY SSF46906 68 141 1.31E-21 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Atu0763 88550da0341133b5f7031c2b0ec03600 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 4.3E-25 T 14-10-2018 Atu0763 88550da0341133b5f7031c2b0ec03600 224 SUPERFAMILY SSF56784 7 218 1.34E-44 T 14-10-2018 IPR036412 HAD-like superfamily Atu0763 88550da0341133b5f7031c2b0ec03600 224 Gene3D G3DSA:3.40.50.1000 8 200 2.6E-42 T 14-10-2018 IPR023214 HAD superfamily Atu0763 88550da0341133b5f7031c2b0ec03600 224 Gene3D G3DSA:1.10.150.240 19 88 2.6E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu0763 88550da0341133b5f7031c2b0ec03600 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 99 188 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu3425 256302c0220a0d8a52c9afb263b0d9cf 181 SUPERFAMILY SSF50475 29 180 1.67E-44 T 14-10-2018 Atu3425 256302c0220a0d8a52c9afb263b0d9cf 181 Gene3D G3DSA:2.30.110.10 18 181 2.7E-45 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu3425 256302c0220a0d8a52c9afb263b0d9cf 181 Pfam PF01613 Flavin reductase like domain 34 180 6.8E-34 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu3425 256302c0220a0d8a52c9afb263b0d9cf 181 SMART SM00903 33 179 1.5E-49 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu4592 b248295ae827cf0cef4d3f377a0e424d 264 SUPERFAMILY SSF56529 4 258 3.36E-25 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu4592 b248295ae827cf0cef4d3f377a0e424d 264 Gene3D G3DSA:3.90.850.10 3 260 4.2E-35 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 SUPERFAMILY SSF52540 317 551 6.25E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2705 a12dd96154cb319477cfb5580e6205c5 577 Pfam PF00664 ABC transporter transmembrane region 16 276 7.2E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 Gene3D G3DSA:1.20.1560.10 1 312 3.9E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 SMART SM00382 351 538 4.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2705 a12dd96154cb319477cfb5580e6205c5 577 Pfam PF00005 ABC transporter 343 490 5.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 Gene3D G3DSA:3.40.50.300 322 574 2.6E-66 T 14-10-2018 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 SUPERFAMILY SSF90123 6 314 2.35E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2705 a12dd96154cb319477cfb5580e6205c5 577 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 8 552 3.4E-245 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Atu3999 0551eaf3319c1e2a0cd8d52ec470312e 212 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 190 25.198 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Atu3999 0551eaf3319c1e2a0cd8d52ec470312e 212 Gene3D G3DSA:3.40.50.300 4 201 9.8E-46 T 14-10-2018 Atu3999 0551eaf3319c1e2a0cd8d52ec470312e 212 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 158 2.2E-34 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Atu3999 0551eaf3319c1e2a0cd8d52ec470312e 212 PIRSF PIRSF006755 1 210 3.9E-52 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Atu3999 0551eaf3319c1e2a0cd8d52ec470312e 212 Pfam PF13500 AAA domain 5 192 1.4E-47 T 14-10-2018 Atu3999 0551eaf3319c1e2a0cd8d52ec470312e 212 SUPERFAMILY SSF52540 1 196 7.12E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5433 62d48a138b0481c4129a94062d95c312 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 47 3.1E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5433 62d48a138b0481c4129a94062d95c312 336 Pfam PF13407 Periplasmic binding protein domain 63 314 5.5E-31 T 14-10-2018 IPR025997 Periplasmic binding protein Atu5433 62d48a138b0481c4129a94062d95c312 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 Atu5433 62d48a138b0481c4129a94062d95c312 336 SMART SM00354 5 72 9.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5433 62d48a138b0481c4129a94062d95c312 336 Gene3D G3DSA:3.40.50.2300 164 335 7.0E-38 T 14-10-2018 Atu5433 62d48a138b0481c4129a94062d95c312 336 SUPERFAMILY SSF53822 62 316 4.93E-35 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5433 62d48a138b0481c4129a94062d95c312 336 Gene3D G3DSA:3.40.50.2300 71 327 7.0E-38 T 14-10-2018 Atu5433 62d48a138b0481c4129a94062d95c312 336 Gene3D G3DSA:1.10.260.40 2 51 1.1E-12 T 14-10-2018 Atu5433 62d48a138b0481c4129a94062d95c312 336 SUPERFAMILY SSF47413 4 48 1.88E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu5433 62d48a138b0481c4129a94062d95c312 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 5.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5433 62d48a138b0481c4129a94062d95c312 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 5.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 SUPERFAMILY SSF81606 253 464 5.1E-32 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 Gene3D G3DSA:3.60.40.10 241 466 4.6E-31 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 Gene3D G3DSA:3.40.1730.10 15 213 2.6E-43 T 14-10-2018 IPR038225 T6S-associated protein TagF superfamily Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 19 154 2.9E-43 T 14-10-2018 IPR017748 T6S-associated protein TagF Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 SMART SM00332 242 464 1.1E-6 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 19 153 2.0E-40 T 14-10-2018 IPR017748 T6S-associated protein TagF Atu4331 c75eb0e2c298efcf48ee0a63bb4a738f 471 Pfam PF00481 Protein phosphatase 2C 275 380 6.4E-5 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Atu1695 4d04905c472bc072416ca91041a379f7 349 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 21 349 39.087 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1695 4d04905c472bc072416ca91041a379f7 349 Pfam PF04055 Radical SAM superfamily 34 196 1.3E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu1695 4d04905c472bc072416ca91041a379f7 349 Pfam PF06463 Molybdenum Cofactor Synthesis C 202 328 3.0E-40 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1695 4d04905c472bc072416ca91041a379f7 349 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 36 47 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1695 4d04905c472bc072416ca91041a379f7 349 Pfam PF13353 4Fe-4S single cluster domain 37 132 1.4E-10 T 14-10-2018 Atu1695 4d04905c472bc072416ca91041a379f7 349 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 21 349 8.9E-112 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1695 4d04905c472bc072416ca91041a379f7 349 SUPERFAMILY SSF102114 20 300 1.44E-74 T 14-10-2018 Atu1695 4d04905c472bc072416ca91041a379f7 349 Gene3D G3DSA:3.20.20.70 18 349 1.6E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1695 4d04905c472bc072416ca91041a379f7 349 SMART SM00729 30 235 2.3E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 Pfam PF00005 ABC transporter 33 180 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 SMART SM00382 307 498 6.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 SMART SM00382 42 259 5.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 SUPERFAMILY SSF52540 19 244 3.75E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 Pfam PF12698 ABC-2 family transporter protein 579 916 2.8E-36 T 14-10-2018 Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 Gene3D G3DSA:3.40.50.300 4 255 1.7E-59 T 14-10-2018 Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 SUPERFAMILY SSF52540 281 503 3.0E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 Gene3D G3DSA:3.40.50.300 273 522 2.7E-65 T 14-10-2018 Atu4667 93f4a90e8a852028b4bafa5a76cb1805 925 Pfam PF00005 ABC transporter 298 442 8.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0845 eeb66f847444e7cdd1746c113a08afbb 257 Gene3D G3DSA:2.40.440.10 88 257 7.2E-38 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0845 eeb66f847444e7cdd1746c113a08afbb 257 SUPERFAMILY SSF141523 114 256 1.83E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0845 eeb66f847444e7cdd1746c113a08afbb 257 Pfam PF03734 L,D-transpeptidase catalytic domain 118 255 1.8E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu1489 ca441c703d6e5cdc70c88d65fb9b546a 229 Pfam PF03358 NADPH-dependent FMN reductase 23 166 6.0E-26 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Atu1489 ca441c703d6e5cdc70c88d65fb9b546a 229 Gene3D G3DSA:3.40.50.360 1 229 1.8E-76 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu1489 ca441c703d6e5cdc70c88d65fb9b546a 229 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 2 215 7.4E-127 T 14-10-2018 IPR014063 Arsenate resistance ArsH Atu1489 ca441c703d6e5cdc70c88d65fb9b546a 229 SUPERFAMILY SSF52218 15 215 3.83E-63 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 SUPERFAMILY SSF143548 321 449 8.89E-33 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 Gene3D G3DSA:3.40.50.720 6 305 9.6E-120 T 14-10-2018 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 SUPERFAMILY SSF55021 446 526 5.83E-16 T 14-10-2018 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 SUPERFAMILY SSF51735 100 284 9.07E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 SUPERFAMILY SSF52283 3 129 1.51E-38 T 14-10-2018 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 283 6.0E-63 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 315 3.1E-37 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 Gene3D G3DSA:3.30.1330.90 321 453 3.8E-29 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 Gene3D G3DSA:3.30.70.260 454 528 2.2E-20 T 14-10-2018 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 525 9.0E-204 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Atu3706 a08b46f2d1a9e4b52c04075e4f827e2a 531 Gene3D G3DSA:3.40.50.720 100 281 9.6E-120 T 14-10-2018 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SUPERFAMILY SSF141868 530 780 3.01E-79 T 14-10-2018 IPR035919 EAL domain superfamily Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 510 1.0E-42 T 14-10-2018 IPR000160 GGDEF domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Gene3D G3DSA:3.30.450.20 226 352 1.6E-10 T 14-10-2018 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Gene3D G3DSA:3.30.70.270 353 528 3.4E-52 T 14-10-2018 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SMART SM00052 525 776 1.4E-95 T 14-10-2018 IPR001633 EAL domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Pfam PF00989 PAS fold 231 337 6.2E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SMART SM00304 168 220 2.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SUPERFAMILY SSF55785 213 341 3.44E-14 T 14-10-2018 IPR035965 PAS domain superfamily Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Gene3D G3DSA:3.20.20.450 529 791 2.3E-87 T 14-10-2018 IPR035919 EAL domain superfamily Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 352 515 2.6E-41 T 14-10-2018 IPR000160 GGDEF domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SUPERFAMILY SSF158472 169 216 2.22E-7 T 14-10-2018 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Pfam PF00563 EAL domain 531 771 2.6E-68 T 14-10-2018 IPR001633 EAL domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Gene3D G3DSA:1.20.1480.50 136 225 3.2E-6 T 14-10-2018 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 Pfam PF00672 HAMP domain 170 216 6.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SMART SM00091 227 293 3.3E-6 T 14-10-2018 IPR000014 PAS domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SMART SM00267 343 515 1.0E-52 T 14-10-2018 IPR000160 GGDEF domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 230 349 1.0E-12 T 14-10-2018 IPR000014 PAS domain Atu2228 47ac1374b7ceb8b594e32dea04265dd0 795 SUPERFAMILY SSF55073 359 517 1.18E-44 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0575 ac86911c48225d0c1e25c8bb8679daf3 492 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 427 489 9.6E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atu0575 ac86911c48225d0c1e25c8bb8679daf3 492 SUPERFAMILY SSF64518 125 491 7.32E-9 T 14-10-2018 Atu0575 ac86911c48225d0c1e25c8bb8679daf3 492 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 490 1.2E-80 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Atu0489 5b770dd9d1741bb9736fd407b3bdc6b6 278 Gene3D G3DSA:3.40.50.150 66 265 2.5E-21 T 14-10-2018 Atu0489 5b770dd9d1741bb9736fd407b3bdc6b6 278 Pfam PF13489 Methyltransferase domain 93 221 1.2E-8 T 14-10-2018 Atu0489 5b770dd9d1741bb9736fd407b3bdc6b6 278 Gene3D G3DSA:1.25.40.10 1 56 3.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0489 5b770dd9d1741bb9736fd407b3bdc6b6 278 SUPERFAMILY SSF48452 2 45 4.64E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0489 5b770dd9d1741bb9736fd407b3bdc6b6 278 SUPERFAMILY SSF53335 73 275 8.95E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 SUPERFAMILY SSF53850 92 296 1.28E-50 T 14-10-2018 Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 Pfam PF03466 LysR substrate binding domain 90 294 1.1E-51 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 Gene3D G3DSA:3.40.190.290 93 297 7.0E-55 T 14-10-2018 Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 Gene3D G3DSA:1.10.10.10 1 87 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.7E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4264 6eb8dd90097023c1dd1d976d931dce81 298 SUPERFAMILY SSF46785 9 113 4.66E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3371 12b543e468817465e22c94c1fb84413a 513 SUPERFAMILY SSF52540 23 247 4.67E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3371 12b543e468817465e22c94c1fb84413a 513 Pfam PF00005 ABC transporter 39 189 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3371 12b543e468817465e22c94c1fb84413a 513 ProSitePatterns PS00211 ABC transporters family signature. 416 430 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3371 12b543e468817465e22c94c1fb84413a 513 Gene3D G3DSA:3.40.50.300 12 270 4.2E-56 T 14-10-2018 Atu3371 12b543e468817465e22c94c1fb84413a 513 Pfam PF00005 ABC transporter 289 443 8.9E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3371 12b543e468817465e22c94c1fb84413a 513 SUPERFAMILY SSF52540 258 497 1.91E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3371 12b543e468817465e22c94c1fb84413a 513 Gene3D G3DSA:3.40.50.300 274 510 1.5E-45 T 14-10-2018 Atu3371 12b543e468817465e22c94c1fb84413a 513 SMART SM00382 297 492 3.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3371 12b543e468817465e22c94c1fb84413a 513 SMART SM00382 48 237 6.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 SMART SM01049 33 126 1.1E-25 T 14-10-2018 IPR033480 Single Cache domain 2 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 SMART SM00304 209 262 0.016 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 SMART SM00304 290 341 4.5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 SMART SM00283 342 589 3.7E-80 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 Gene3D G3DSA:3.30.450.20 35 180 1.6E-34 T 14-10-2018 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 404 554 9.7E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 392 1.9E-37 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 467 1.9E-37 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 517 546 1.9E-37 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 1.9E-37 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 Pfam PF17200 Single Cache domain 2 38 184 3.9E-30 T 14-10-2018 IPR033480 Single Cache domain 2 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 Gene3D G3DSA:1.10.287.950 292 591 1.6E-70 T 14-10-2018 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 SUPERFAMILY SSF58104 319 591 7.06E-61 T 14-10-2018 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 SUPERFAMILY SSF158472 209 259 3.01E-5 T 14-10-2018 Atu0646 3e1cb2d3485d54f82d9d1b62ddad1780 607 Gene3D G3DSA:1.20.1480.50 181 270 3.7E-9 T 14-10-2018 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 Gene3D G3DSA:3.40.190.10 144 273 2.1E-52 T 14-10-2018 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 SUPERFAMILY SSF53850 36 358 7.25E-56 T 14-10-2018 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 57 8.9E-8 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 135 151 8.9E-8 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 8.9E-8 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 57 78 8.9E-8 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 102 115 8.9E-8 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 Pfam PF13416 Bacterial extracellular solute-binding protein 52 320 4.0E-29 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5420 2cd5c8719434cd4e776131cb5454a2cf 366 Gene3D G3DSA:3.40.190.10 41 330 2.1E-52 T 14-10-2018 Atu2238 5182feed07c2a7db38d52a67cd911f05 427 Pfam PF00033 Cytochrome b/b6/petB 32 219 2.2E-71 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Atu2238 5182feed07c2a7db38d52a67cd911f05 427 Gene3D G3DSA:1.20.810.10 2 426 1.1E-166 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Atu2238 5182feed07c2a7db38d52a67cd911f05 427 SUPERFAMILY SSF81342 21 277 3.92E-103 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Atu2238 5182feed07c2a7db38d52a67cd911f05 427 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 276 383 4.9E-43 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Atu2238 5182feed07c2a7db38d52a67cd911f05 427 PIRSF PIRSF038885 5 414 5.4E-197 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Atu2238 5182feed07c2a7db38d52a67cd911f05 427 SUPERFAMILY SSF81648 278 404 2.14E-40 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 SUPERFAMILY SSF50331 236 329 1.04E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4450 f8111e231182f378f1d50b78ca66a90d 332 Gene3D G3DSA:2.40.50.940 222 250 7.1E-11 T 14-10-2018 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 Gene3D G3DSA:3.40.50.300 3 221 1.7E-63 T 14-10-2018 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 Pfam PF00005 ABC transporter 22 161 3.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 SMART SM00382 28 211 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4450 f8111e231182f378f1d50b78ca66a90d 332 Gene3D G3DSA:2.40.50.140 262 317 4.7E-11 T 14-10-2018 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 Gene3D G3DSA:2.40.50.940 252 326 4.7E-11 T 14-10-2018 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 SUPERFAMILY SSF52540 4 242 2.1E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4450 f8111e231182f378f1d50b78ca66a90d 332 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4450 f8111e231182f378f1d50b78ca66a90d 332 Pfam PF08402 TOBE domain 256 325 1.1E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 SUPERFAMILY SSF46785 821 884 1.05E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 SUPERFAMILY SSF52540 477 787 7.41E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 Pfam PF09397 Ftsk gamma domain 823 882 1.1E-25 T 14-10-2018 IPR018541 FtsK gamma domain Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 Gene3D G3DSA:3.40.50.300 495 802 2.5E-116 T 14-10-2018 Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 Gene3D G3DSA:3.30.980.40 389 494 6.0E-30 T 14-10-2018 Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 SMART SM00382 533 738 2.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 Gene3D G3DSA:1.10.10.10 816 881 2.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 Pfam PF01580 FtsK/SpoIIIE family 498 717 3.9E-66 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 SMART SM00843 821 885 1.1E-37 T 14-10-2018 IPR018541 FtsK gamma domain Atu2759 09ee90f964cc9a85b946b84025bf0ac2 891 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 176 2.8E-19 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Gene3D G3DSA:2.40.50.140 50 126 4.3E-33 T 14-10-2018 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 421 248.124 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Pfam PF07497 Rho termination factor, RNA-binding domain 55 128 1.3E-30 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 1.6E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 SMART SM00959 8 50 2.8E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 SUPERFAMILY SSF50249 51 128 1.94E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 SUPERFAMILY SSF68912 4 48 1.77E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Gene3D G3DSA:3.40.50.300 133 420 3.2E-129 T 14-10-2018 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 SMART SM00357 55 121 3.3E-18 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 420 4.1E-215 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 366 2.0E-23 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 SMART SM00382 173 358 1.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 Gene3D G3DSA:1.10.720.10 1 48 7.5E-16 T 14-10-2018 Atu2833 1e11ace78ab9a0e922a113c50d4cfdc2 421 SUPERFAMILY SSF52540 93 374 2.67E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4269 aaa4171a0d90156569052b47bb42f472 281 Gene3D G3DSA:3.10.310.10 7 124 6.1E-75 T 14-10-2018 Atu4269 aaa4171a0d90156569052b47bb42f472 281 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 260 4.6E-45 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu4269 aaa4171a0d90156569052b47bb42f472 281 SUPERFAMILY SSF54506 1 278 8.03E-65 T 14-10-2018 Atu4269 aaa4171a0d90156569052b47bb42f472 281 Gene3D G3DSA:3.10.310.10 125 272 6.1E-75 T 14-10-2018 Atu4269 aaa4171a0d90156569052b47bb42f472 281 PIRSF PIRSF016184 1 280 2.1E-62 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu4269 aaa4171a0d90156569052b47bb42f472 281 Pfam PF02567 Phenazine biosynthesis-like protein 8 272 7.6E-47 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu1954 f3cb9c6ef99439d69236532e8af8d428 361 SMART SM00421 292 349 1.9E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1954 f3cb9c6ef99439d69236532e8af8d428 361 Gene3D G3DSA:1.10.10.10 275 354 2.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1954 f3cb9c6ef99439d69236532e8af8d428 361 SUPERFAMILY SSF46894 282 349 1.87E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu1954 f3cb9c6ef99439d69236532e8af8d428 361 Pfam PF00196 Bacterial regulatory proteins, luxR family 295 347 1.5E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 9.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 9.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 77 9.9E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 SUPERFAMILY SSF53474 13 300 7.33E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00412 Epoxide hydrolase signature 122 135 1.5E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00412 Epoxide hydrolase signature 108 121 1.5E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00412 Epoxide hydrolase signature 275 297 1.5E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 PRINTS PR00412 Epoxide hydrolase signature 43 61 1.5E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 Pfam PF00561 alpha/beta hydrolase fold 37 161 1.3E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5297 7d80c98e65bd6ae6229104b75a855523 307 Gene3D G3DSA:3.40.50.1820 9 300 2.2E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1823 60942897b1af4c9573271f3a27b391c4 251 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 245 2.0E-102 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Atu1823 60942897b1af4c9573271f3a27b391c4 251 SMART SM00382 28 225 1.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1823 60942897b1af4c9573271f3a27b391c4 251 Gene3D G3DSA:3.40.50.300 1 249 3.3E-55 T 14-10-2018 Atu1823 60942897b1af4c9573271f3a27b391c4 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1823 60942897b1af4c9573271f3a27b391c4 251 SUPERFAMILY SSF52540 2 232 9.14E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1823 60942897b1af4c9573271f3a27b391c4 251 Pfam PF00005 ABC transporter 20 174 2.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:3.30.70.1430 552 651 3.2E-236 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 SUPERFAMILY SSF82866 787 1009 1.29E-40 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:3.30.70.1440 652 851 3.2E-236 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:1.20.1640.10 508 1003 3.2E-236 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:1.20.1640.10 14 507 3.2E-236 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:3.30.70.1430 43 799 3.2E-236 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 SUPERFAMILY SSF82866 294 490 4.84E-32 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 SUPERFAMILY SSF82714 705 789 1.28E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 1.5E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:3.30.70.1320 139 329 3.2E-236 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:3.30.2090.10 703 791 3.2E-236 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 SUPERFAMILY SSF82693 139 326 1.54E-18 T 14-10-2018 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Pfam PF00873 AcrB/AcrD/AcrF family 7 1004 3.1E-153 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 SUPERFAMILY SSF82714 188 268 4.32E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 Gene3D G3DSA:3.30.2090.10 182 271 3.2E-236 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3795 4cee1e01d1ddabd7a87a01195696552f 1023 SUPERFAMILY SSF82693 43 138 4.53E-20 T 14-10-2018 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 Gene3D G3DSA:3.40.50.12740 5 210 3.9E-47 T 14-10-2018 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 SUPERFAMILY SSF46894 143 208 1.5E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 Pfam PF00072 Response regulator receiver domain 6 117 7.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 SMART SM00421 149 206 2.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 SUPERFAMILY SSF52172 2 129 2.85E-25 T 14-10-2018 IPR011006 CheY-like superfamily Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 SMART SM00448 4 118 2.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0484 caabac4e78f761212bca1d6351d3f2e6 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 3.9E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0284 267a16e643e6c2b683ecedb3846b5e0c 150 PIRSF PIRSF005859 1 150 6.3E-47 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Atu0284 267a16e643e6c2b683ecedb3846b5e0c 150 Gene3D G3DSA:1.20.1260.100 2 150 8.0E-44 T 14-10-2018 IPR038330 TspO/MBR-related superfamily Atu0284 267a16e643e6c2b683ecedb3846b5e0c 150 Pfam PF03073 TspO/MBR family 10 146 1.4E-41 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 Atu8087 0d100576ac366ceddab8f6b065bd2619 306 Gene3D G3DSA:1.10.101.10 113 190 6.6E-9 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu8087 0d100576ac366ceddab8f6b065bd2619 306 SUPERFAMILY SSF47090 241 300 1.88E-11 T 14-10-2018 IPR036365 PGBD-like superfamily Atu8087 0d100576ac366ceddab8f6b065bd2619 306 SUPERFAMILY SSF47090 130 187 2.67E-10 T 14-10-2018 IPR036365 PGBD-like superfamily Atu8087 0d100576ac366ceddab8f6b065bd2619 306 Gene3D G3DSA:1.10.101.10 229 304 7.0E-9 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu8087 0d100576ac366ceddab8f6b065bd2619 306 Pfam PF01471 Putative peptidoglycan binding domain 135 187 6.7E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu8087 0d100576ac366ceddab8f6b065bd2619 306 Pfam PF01471 Putative peptidoglycan binding domain 248 300 1.6E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu1998 46ce26958700b42b9a3f4e33f4249479 158 Pfam PF12680 SnoaL-like domain 45 140 6.6E-13 T 14-10-2018 IPR037401 SnoaL-like domain Atu1998 46ce26958700b42b9a3f4e33f4249479 158 Gene3D G3DSA:3.10.450.50 32 158 4.3E-37 T 14-10-2018 Atu1998 46ce26958700b42b9a3f4e33f4249479 158 SUPERFAMILY SSF54427 36 148 4.02E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 SMART SM00925 103 260 1.7E-76 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 Gene3D G3DSA:2.40.40.10 11 362 8.6E-125 T 14-10-2018 IPR036908 RlpA-like domain superfamily Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 PIRSF PIRSF019422 2 370 3.5E-112 T 14-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 Gene3D G3DSA:2.40.240.50 102 262 8.6E-125 T 14-10-2018 Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 Pfam PF06725 3D domain 283 359 1.2E-22 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 Pfam PF03562 MltA specific insert domain 18 260 2.8E-63 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Atu0009 7d69c00d3b78e4f489ab69762d4585a2 370 SUPERFAMILY SSF50685 8 362 5.58E-115 T 14-10-2018 IPR036908 RlpA-like domain superfamily Atu1599 f3abf7743b12d08d683051d1e8c61014 159 Gene3D G3DSA:3.10.129.10 4 131 6.6E-29 T 14-10-2018 Atu1599 f3abf7743b12d08d683051d1e8c61014 159 SUPERFAMILY SSF54637 6 125 3.73E-26 T 14-10-2018 IPR029069 HotDog domain superfamily Atu1599 f3abf7743b12d08d683051d1e8c61014 159 Pfam PF07977 FabA-like domain 4 122 1.1E-16 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu1173 f087587bca0850be32f512c60f30a397 407 Gene3D G3DSA:1.20.1250.20 12 401 1.6E-29 T 14-10-2018 Atu1173 f087587bca0850be32f512c60f30a397 407 Pfam PF07690 Major Facilitator Superfamily 20 272 2.8E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1173 f087587bca0850be32f512c60f30a397 407 SUPERFAMILY SSF103473 21 403 9.55E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0869 92df106c1bf97723e069bb838b9bc129 122 Gene3D G3DSA:3.30.720.110 66 122 3.0E-28 T 14-10-2018 Atu0869 92df106c1bf97723e069bb838b9bc129 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 1.4E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0869 92df106c1bf97723e069bb838b9bc129 122 Gene3D G3DSA:3.30.720.120 1 54 7.1E-29 T 14-10-2018 Atu0869 92df106c1bf97723e069bb838b9bc129 122 PIRSF PIRSF039020 1 121 8.5E-48 T 14-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR Atu0869 92df106c1bf97723e069bb838b9bc129 122 SUPERFAMILY SSF54593 2 121 4.83E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu8036 c543f79f831376983fbb2f0c0147d92e 40 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 3.0E-17 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 Atu8036 c543f79f831376983fbb2f0c0147d92e 40 Pfam PF08173 Membrane bound YbgT-like protein 1 26 7.1E-13 T 14-10-2018 IPR012994 Membrane bound YbgT-like Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 2.9E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 264 2.9E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 2.9E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 290 2.9E-28 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 Gene3D G3DSA:3.40.50.1370 135 289 4.5E-123 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 Gene3D G3DSA:3.40.50.1370 14 298 4.5E-123 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 6.8E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 6.8E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 281 292 6.8E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 6.8E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 6.8E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 145 4.1E-49 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 303 78.702 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 SUPERFAMILY SSF53671 4 303 3.14E-105 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 302 1.5E-116 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Atu0429 fd1f84a423cf5f4f551db419324cebe6 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 300 5.0E-50 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Atu1419 f15febc5d993f4120a98da94a6f03671 244 Gene3D G3DSA:1.10.10.10 8 71 9.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1419 f15febc5d993f4120a98da94a6f03671 244 Pfam PF07729 FCD domain 81 214 1.9E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu1419 f15febc5d993f4120a98da94a6f03671 244 SUPERFAMILY SSF48008 78 222 1.18E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1419 f15febc5d993f4120a98da94a6f03671 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 71 1.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1419 f15febc5d993f4120a98da94a6f03671 244 SMART SM00345 13 71 3.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1419 f15febc5d993f4120a98da94a6f03671 244 SUPERFAMILY SSF46785 13 100 1.32E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1419 f15febc5d993f4120a98da94a6f03671 244 Gene3D G3DSA:1.20.120.530 72 226 1.2E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1419 f15febc5d993f4120a98da94a6f03671 244 SMART SM00895 81 217 4.7E-18 T 14-10-2018 IPR011711 GntR, C-terminal Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 SUPERFAMILY SSF52172 4 182 3.7E-40 T 14-10-2018 IPR011006 CheY-like superfamily Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 SMART SM00448 3 114 2.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 5 472 9.2E-211 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 475 8.5E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 8.5E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Pfam PF00158 Sigma-54 interaction domain 138 304 2.4E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Pfam PF02954 Bacterial regulatory protein, Fis family 432 472 1.4E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Gene3D G3DSA:3.40.50.300 131 308 2.4E-66 T 14-10-2018 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Pfam PF00072 Response regulator receiver domain 5 114 6.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 SUPERFAMILY SSF46689 385 474 3.54E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Gene3D G3DSA:1.10.10.60 382 474 5.6E-21 T 14-10-2018 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Gene3D G3DSA:3.40.50.2300 1 130 5.5E-32 T 14-10-2018 Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 SUPERFAMILY SSF52540 138 379 3.45E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 SMART SM00382 158 301 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1446 3c86c237f23d532b2c70d37db5ed4b38 483 Gene3D G3DSA:1.10.8.60 309 381 4.8E-22 T 14-10-2018 Atu0378 4b624c47a89dc2e0e1fcadab1547765e 237 SUPERFAMILY SSF56784 20 230 1.84E-30 T 14-10-2018 IPR036412 HAD-like superfamily Atu0378 4b624c47a89dc2e0e1fcadab1547765e 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 21 196 2.0E-9 T 14-10-2018 Atu0378 4b624c47a89dc2e0e1fcadab1547765e 237 Gene3D G3DSA:1.10.150.450 30 97 1.5E-31 T 14-10-2018 Atu0378 4b624c47a89dc2e0e1fcadab1547765e 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 56 196 1.1E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu0378 4b624c47a89dc2e0e1fcadab1547765e 237 Gene3D G3DSA:3.40.50.1000 22 201 1.5E-31 T 14-10-2018 IPR023214 HAD superfamily Atu0378 4b624c47a89dc2e0e1fcadab1547765e 237 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 19 196 6.2E-72 T 14-10-2018 IPR010237 Pyrimidine 5-nucleotidase Atu0738 877f38d5ee8a154932c6f637490c13a8 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 395 2.1E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 2.1E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 2.1E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 470 2.1E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 Gene3D G3DSA:1.10.287.950 297 594 5.6E-76 T 14-10-2018 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 SMART SM00283 345 592 1.6E-102 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 Pfam PF00672 HAMP domain 211 252 1.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 SMART SM00304 292 344 9.1 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 SMART SM00304 211 265 3.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 SUPERFAMILY SSF158472 211 256 1.31E-9 T 14-10-2018 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 Gene3D G3DSA:1.20.1480.50 173 284 5.1E-16 T 14-10-2018 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 Pfam PF05227 CHASE3 domain 44 175 4.6E-17 T 14-10-2018 IPR007891 CHASE3 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 405 558 5.1E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0738 877f38d5ee8a154932c6f637490c13a8 673 SUPERFAMILY SSF58104 312 593 2.09E-68 T 14-10-2018 Atu4655 a606e244f6eecf52818bb7bba1deb128 408 Gene3D G3DSA:3.30.420.40 88 220 2.1E-23 T 14-10-2018 Atu4655 a606e244f6eecf52818bb7bba1deb128 408 Gene3D G3DSA:3.30.420.40 221 364 3.5E-37 T 14-10-2018 Atu4655 a606e244f6eecf52818bb7bba1deb128 408 SUPERFAMILY SSF46785 20 83 1.98E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4655 a606e244f6eecf52818bb7bba1deb128 408 SUPERFAMILY SSF53067 93 388 4.99E-44 T 14-10-2018 Atu4655 a606e244f6eecf52818bb7bba1deb128 408 Gene3D G3DSA:1.10.10.10 13 87 1.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4655 a606e244f6eecf52818bb7bba1deb128 408 Pfam PF00480 ROK family 94 386 4.2E-44 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu5108 3aaeaf831561b5acb32b469eca690371 639 Gene3D G3DSA:3.40.50.300 367 627 3.6E-33 T 14-10-2018 Atu5108 3aaeaf831561b5acb32b469eca690371 639 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 166 633 1.1E-93 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Atu5108 3aaeaf831561b5acb32b469eca690371 639 SUPERFAMILY SSF52540 190 625 6.37E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5108 3aaeaf831561b5acb32b469eca690371 639 TIGRFAM TIGR02767 TraG-Ti: Ti-type conjugative transfer system protein TraG 10 634 0.0 T 14-10-2018 IPR014135 Ti-type conjugative transfer system, TraG Atu0591 01de4a87d946c730c99a230fd2194049 453 Gene3D G3DSA:3.40.190.10 171 434 8.1E-48 T 14-10-2018 Atu0591 01de4a87d946c730c99a230fd2194049 453 Pfam PF01547 Bacterial extracellular solute-binding protein 66 366 1.1E-17 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu0591 01de4a87d946c730c99a230fd2194049 453 Gene3D G3DSA:3.40.190.10 68 398 8.1E-48 T 14-10-2018 Atu0591 01de4a87d946c730c99a230fd2194049 453 SUPERFAMILY SSF53850 50 451 5.2E-46 T 14-10-2018 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 628 2.1E-241 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 SMART SM00861 320 485 2.4E-59 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 SUPERFAMILY SSF52518 317 506 1.94E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 Gene3D G3DSA:3.40.50.970 318 493 2.8E-62 T 14-10-2018 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 Gene3D G3DSA:3.40.50.920 497 632 3.5E-35 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 3.4E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 ProSitePatterns PS00802 Transketolase signature 2. 426 442 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 SUPERFAMILY SSF52922 492 629 1.15E-32 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 Pfam PF02780 Transketolase, C-terminal domain 497 620 6.7E-29 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 SUPERFAMILY SSF52518 5 382 2.03E-79 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 283 6.3E-116 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu0745 8f76b764cb5d8011bcb220b5e69364a0 639 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 629 44.667 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 Gene3D G3DSA:3.30.390.10 1 105 9.6E-45 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 Pfam PF13378 Enolase C-terminal domain-like 176 391 1.4E-56 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 SMART SM00922 173 269 1.1E-22 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 SUPERFAMILY SSF51604 99 399 8.78E-67 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 SUPERFAMILY SSF54826 1 113 1.85E-29 T 14-10-2018 Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 Gene3D G3DSA:3.20.20.120 106 400 3.3E-107 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 219 250 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Atu2811 d0baa2d2cd20cd3d5433cae51a230d84 400 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 110 7.1E-6 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu5257 72a276a35156d81e795effc3fd2af350 329 SUPERFAMILY SSF52540 6 263 8.36E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5257 72a276a35156d81e795effc3fd2af350 329 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5257 72a276a35156d81e795effc3fd2af350 329 Pfam PF00005 ABC transporter 40 191 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5257 72a276a35156d81e795effc3fd2af350 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 2.3E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5257 72a276a35156d81e795effc3fd2af350 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 307 1.3E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5257 72a276a35156d81e795effc3fd2af350 329 SMART SM00382 49 241 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5257 72a276a35156d81e795effc3fd2af350 329 Gene3D G3DSA:3.40.50.300 3 329 3.6E-96 T 14-10-2018 Atu2362 611e65becc0f2002f53eb0f6e7870b26 304 Pfam PF02574 Homocysteine S-methyltransferase 6 298 2.3E-58 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Atu2362 611e65becc0f2002f53eb0f6e7870b26 304 Gene3D G3DSA:3.20.20.330 1 304 4.0E-68 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Atu2362 611e65becc0f2002f53eb0f6e7870b26 304 SUPERFAMILY SSF82282 2 301 1.96E-80 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Atu2362 611e65becc0f2002f53eb0f6e7870b26 304 PIRSF PIRSF037505 1 303 3.4E-12 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 Atu4785 3a91d811c62a36f5e9c226b3a551ca69 743 SUPERFAMILY SSF161098 163 434 7.59E-48 T 14-10-2018 IPR035906 MetI-like superfamily Atu4785 3a91d811c62a36f5e9c226b3a551ca69 743 SUPERFAMILY SSF161098 457 720 1.31E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu4785 3a91d811c62a36f5e9c226b3a551ca69 743 Gene3D G3DSA:1.10.3720.10 158 441 2.3E-63 T 14-10-2018 IPR035906 MetI-like superfamily Atu4785 3a91d811c62a36f5e9c226b3a551ca69 743 Gene3D G3DSA:1.10.3720.10 456 724 1.1E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu4785 3a91d811c62a36f5e9c226b3a551ca69 743 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 538 708 2.1E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4785 3a91d811c62a36f5e9c226b3a551ca69 743 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 241 429 2.4E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0131 3733d5d110fc7bacf1c4ba50199eb4a3 266 Pfam PF01048 Phosphorylase superfamily 19 263 8.5E-50 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Atu0131 3733d5d110fc7bacf1c4ba50199eb4a3 266 SUPERFAMILY SSF53167 6 262 1.31E-80 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Atu0131 3733d5d110fc7bacf1c4ba50199eb4a3 266 PIRSF PIRSF000477 3 264 1.9E-83 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Atu0131 3733d5d110fc7bacf1c4ba50199eb4a3 266 Gene3D G3DSA:3.40.50.1580 5 265 1.3E-91 T 14-10-2018 Atu0131 3733d5d110fc7bacf1c4ba50199eb4a3 266 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 19 263 4.3E-110 T 14-10-2018 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Atu0131 3733d5d110fc7bacf1c4ba50199eb4a3 266 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 19 263 8.7E-103 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 ProSitePatterns PS00489 Bacteriophage-type RNA polymerase family active site signature 2. 620 634 - T 14-10-2018 IPR002092 DNA-directed RNA polymerase, phage-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 SUPERFAMILY SSF56672 24 863 2.27E-233 T 14-10-2018 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Pfam PF00940 DNA-dependent RNA polymerase 447 862 6.1E-116 T 14-10-2018 IPR002092 DNA-directed RNA polymerase, phage-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Pfam PF14700 DNA-directed RNA polymerase N-terminal 27 307 1.2E-15 T 14-10-2018 IPR029262 DNA-directed RNA polymerase, N-terminal KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 ProSitePatterns PS00900 Bacteriophage-type RNA polymerase family active site signature 1. 527 538 - T 14-10-2018 IPR002092 DNA-directed RNA polymerase, phage-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 SMART SM01311 26 308 5.5E-58 T 14-10-2018 IPR029262 DNA-directed RNA polymerase, N-terminal KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Gene3D G3DSA:1.10.287.280 443 521 2.8E-157 T 14-10-2018 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Gene3D G3DSA:1.10.1320.10 18 308 2.3E-87 T 14-10-2018 IPR037159 DNA-directed RNA polymerase, N-terminal domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-163282|Reactome: R-HSA-2151201 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Gene3D G3DSA:1.10.287.260 309 403 4.8E-15 T 14-10-2018 IPR024075 DNA-directed RNA polymerase, helix hairpin domain superfamily GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Gene3D G3DSA:1.10.150.20 548 769 2.8E-157 T 14-10-2018 Atu1183 cac3096e06c47ddb5b40d59f08d9e043 863 Gene3D G3DSA:3.30.70.370 413 848 2.8E-157 T 14-10-2018 Atu0173 4d97486ee84dfc252b66720b4b4c421b 301 SUPERFAMILY SSF53850 40 252 9.37E-51 T 14-10-2018 Atu0173 4d97486ee84dfc252b66720b4b4c421b 301 Gene3D G3DSA:3.40.190.10 115 236 6.6E-57 T 14-10-2018 Atu0173 4d97486ee84dfc252b66720b4b4c421b 301 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 6 261 5.6E-68 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Atu0173 4d97486ee84dfc252b66720b4b4c421b 301 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 288 2.2E-59 T 14-10-2018 Atu0173 4d97486ee84dfc252b66720b4b4c421b 301 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 1 298 1.5E-88 T 14-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 Atu0173 4d97486ee84dfc252b66720b4b4c421b 301 Gene3D G3DSA:3.40.190.10 33 264 6.6E-57 T 14-10-2018 Atu3691 bda31276f88724c236d1f0ed779f3dd6 267 Gene3D G3DSA:3.40.50.300 7 256 6.4E-67 T 14-10-2018 Atu3691 bda31276f88724c236d1f0ed779f3dd6 267 SMART SM00382 31 220 2.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3691 bda31276f88724c236d1f0ed779f3dd6 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3691 bda31276f88724c236d1f0ed779f3dd6 267 SUPERFAMILY SSF52540 7 236 2.31E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3691 bda31276f88724c236d1f0ed779f3dd6 267 Pfam PF00005 ABC transporter 23 170 9.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6024 e9a591336008e987fe0a95992b70e448 306 Gene3D G3DSA:1.10.10.10 1 87 1.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6024 e9a591336008e987fe0a95992b70e448 306 Gene3D G3DSA:3.40.190.10 170 273 2.5E-36 T 14-10-2018 Atu6024 e9a591336008e987fe0a95992b70e448 306 Pfam PF03466 LysR substrate binding domain 98 293 1.1E-33 T 14-10-2018 IPR005119 LysR, substrate-binding Atu6024 e9a591336008e987fe0a95992b70e448 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6024 e9a591336008e987fe0a95992b70e448 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6024 e9a591336008e987fe0a95992b70e448 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6024 e9a591336008e987fe0a95992b70e448 306 SUPERFAMILY SSF46785 6 83 2.13E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6024 e9a591336008e987fe0a95992b70e448 306 Gene3D G3DSA:3.40.190.10 102 283 2.5E-36 T 14-10-2018 Atu6024 e9a591336008e987fe0a95992b70e448 306 SUPERFAMILY SSF53850 99 300 5.12E-29 T 14-10-2018 Atu6024 e9a591336008e987fe0a95992b70e448 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 3.3E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1321 0fdbb1b2efddd1647fdd5967027e7fa0 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.274 T 14-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair Atu1321 0fdbb1b2efddd1647fdd5967027e7fa0 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 2.4E-39 T 14-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 Gene3D G3DSA:3.40.50.300 6 223 6.4E-81 T 14-10-2018 Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 Pfam PF00270 DEAD/DEAH box helicase 38 208 1.3E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 SUPERFAMILY SSF52540 88 374 2.49E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 Pfam PF00271 Helicase conserved C-terminal domain 245 353 1.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 SMART SM00487 33 235 6.4E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 SMART SM00490 272 353 1.8E-36 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2333 85da90b75d8f31ef168f01e9bf19d4c4 502 Gene3D G3DSA:3.40.50.300 227 390 1.1E-54 T 14-10-2018 Atu0715 88b05f4d814d16bdc0966d1722411237 75 Gene3D G3DSA:1.20.20.10 2 75 4.5E-24 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0715 88b05f4d814d16bdc0966d1722411237 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.1E-21 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0715 88b05f4d814d16bdc0966d1722411237 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.1E-21 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0715 88b05f4d814d16bdc0966d1722411237 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.1E-21 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0715 88b05f4d814d16bdc0966d1722411237 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 12.957 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0715 88b05f4d814d16bdc0966d1722411237 75 SUPERFAMILY SSF81333 5 74 3.4E-16 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Atu0715 88b05f4d814d16bdc0966d1722411237 75 Pfam PF00137 ATP synthase subunit C 9 71 1.3E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 1 352 1.3E-90 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 SUPERFAMILY SSF101790 261 357 2.62E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Atu1464 11d21b24e8d97beceb37cf510d39428d 357 Gene3D G3DSA:3.30.1360.120 1 217 2.1E-72 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 253 347 1.0E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 Gene3D G3DSA:4.10.1250.10 218 267 1.1E-21 T 14-10-2018 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 Gene3D G3DSA:3.30.70.1400 36 125 2.1E-72 T 14-10-2018 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 PIRSF PIRSF006487 1 357 2.4E-72 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 Gene3D G3DSA:2.40.30.110 268 347 6.0E-28 T 14-10-2018 Atu1464 11d21b24e8d97beceb37cf510d39428d 357 Pfam PF01571 Aminomethyltransferase folate-binding domain 1 240 4.1E-77 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Atu1464 11d21b24e8d97beceb37cf510d39428d 357 SUPERFAMILY SSF103025 1 269 1.73E-74 T 14-10-2018 Atu0987 2194f4dbed47f83bd5f491c5b9f9db88 296 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 124 288 1.2E-44 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Atu0987 2194f4dbed47f83bd5f491c5b9f9db88 296 Pfam PF03167 Uracil DNA glycosylase superfamily 138 286 4.1E-34 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu0987 2194f4dbed47f83bd5f491c5b9f9db88 296 Gene3D G3DSA:3.40.470.10 98 294 1.3E-49 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu0987 2194f4dbed47f83bd5f491c5b9f9db88 296 SMART SM00986 137 287 1.8E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu0987 2194f4dbed47f83bd5f491c5b9f9db88 296 SMART SM00987 137 287 1.8E-25 T 14-10-2018 Atu0987 2194f4dbed47f83bd5f491c5b9f9db88 296 SUPERFAMILY SSF52141 110 292 1.34E-48 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 SUPERFAMILY SSF52935 321 471 2.09E-38 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 Gene3D G3DSA:3.40.1380.20 334 467 2.2E-160 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 Gene3D G3DSA:2.40.33.10 73 169 2.2E-160 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 SUPERFAMILY SSF50800 73 166 3.14E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 Gene3D G3DSA:3.20.20.60 5 333 2.2E-160 T 14-10-2018 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 6.3E-143 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.5E-31 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 311 327 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 292 310 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 267 291 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 242 266 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 188 202 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 62 78 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 PRINTS PR01050 Pyruvate kinase family signature 215 241 6.8E-65 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 Pfam PF00224 Pyruvate kinase, barrel domain 5 336 3.4E-103 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Atu3762 3d2cd6ef871c514e327e7c53ddab38d3 479 SUPERFAMILY SSF51621 3 342 1.99E-89 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu4763 810c7a16c978cf546c12f3219469458e 155 Gene3D G3DSA:1.10.10.10 5 56 5.9E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4763 810c7a16c978cf546c12f3219469458e 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu4763 810c7a16c978cf546c12f3219469458e 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 4.4E-16 T 14-10-2018 Atu4763 810c7a16c978cf546c12f3219469458e 155 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 4.5E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu4763 810c7a16c978cf546c12f3219469458e 155 Gene3D G3DSA:3.30.70.920 57 140 4.8E-19 T 14-10-2018 Atu4763 810c7a16c978cf546c12f3219469458e 155 SUPERFAMILY SSF54909 66 153 4.83E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4763 810c7a16c978cf546c12f3219469458e 155 SUPERFAMILY SSF46785 3 90 9.54E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4763 810c7a16c978cf546c12f3219469458e 155 SMART SM00344 4 113 1.1E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu4763 810c7a16c978cf546c12f3219469458e 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 9.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4763 810c7a16c978cf546c12f3219469458e 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 9.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4763 810c7a16c978cf546c12f3219469458e 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 9.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 SUPERFAMILY SSF46785 1 105 2.98E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 SUPERFAMILY SSF53850 80 283 3.41E-29 T 14-10-2018 Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 Gene3D G3DSA:1.10.10.10 1 79 3.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 Pfam PF03466 LysR substrate binding domain 86 282 1.1E-28 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 Gene3D G3DSA:3.40.190.10 80 176 7.2E-18 T 14-10-2018 Atu5327 bdb99f2e1ff07561a498d49b70e2a84f 293 Gene3D G3DSA:3.40.190.10 177 252 1.8E-8 T 14-10-2018 Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 Gene3D G3DSA:3.40.50.720 5 262 2.6E-66 T 14-10-2018 Atu5444 786b6682a47132ebeebfe599f434d2a3 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 194 0.0042 T 14-10-2018 Atu5444 786b6682a47132ebeebfe599f434d2a3 262 SUPERFAMILY SSF51735 7 222 1.05E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PIRSF PIRSF000126 1 262 1.1E-68 T 14-10-2018 Atu5444 786b6682a47132ebeebfe599f434d2a3 262 Pfam PF00106 short chain dehydrogenase 6 195 5.6E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5444 786b6682a47132ebeebfe599f434d2a3 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 Gene3D G3DSA:3.40.50.300 17 197 5.5E-44 T 14-10-2018 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 SUPERFAMILY SSF52540 23 216 1.76E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 Pfam PF07650 KH domain 220 296 6.5E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 Hamap MF_00367 GTPase Era [era]. 18 308 33.689 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 TIGRFAM TIGR00436 era: GTP-binding protein Era 21 291 4.4E-75 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 Pfam PF01926 50S ribosome-binding GTPase 23 137 2.0E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 Gene3D G3DSA:3.30.300.20 198 310 1.4E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 180 6.5E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu1036 91a9ea4e8599a44c3c4f8626d63ed1f8 313 SUPERFAMILY SSF54814 193 309 9.81E-40 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 Gene3D G3DSA:3.30.420.40 210 370 1.0E-40 T 14-10-2018 Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 Pfam PF00480 ROK family 97 383 8.9E-21 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 Gene3D G3DSA:3.30.420.40 92 379 1.0E-40 T 14-10-2018 Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 SUPERFAMILY SSF46785 8 77 2.86E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 SUPERFAMILY SSF53067 86 386 4.54E-28 T 14-10-2018 Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 56 1.1E-6 T 14-10-2018 Atu3240 4e88e274cb32bd9c925c39a9fec86d89 399 Gene3D G3DSA:1.10.10.10 1 80 3.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 321 96.035 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 Gene3D G3DSA:3.30.43.10 17 93 8.6E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 208 305 6.5E-26 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 SUPERFAMILY SSF56176 30 215 2.65E-39 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 Gene3D G3DSA:3.90.78.10 224 310 6.1E-29 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 SUPERFAMILY SSF56194 208 310 1.07E-36 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 Gene3D G3DSA:3.30.465.10 100 223 2.6E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 Pfam PF01565 FAD binding domain 43 173 1.3E-15 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atu2092 c9819a3497808a146fa1c48d7e4fc3c2 321 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 34 307 9.5E-49 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Pfam PF04052 TolB amino-terminal domain 28 131 4.3E-35 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 SUPERFAMILY SSF52964 34 163 4.45E-43 T 14-10-2018 Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Gene3D G3DSA:3.40.50.10070 24 166 5.0E-42 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 SUPERFAMILY SSF69304 156 432 1.31E-59 T 14-10-2018 Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 9 430 50.325 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Pfam PF07676 WD40-like Beta Propeller Repeat 242 275 3.0E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Pfam PF07676 WD40-like Beta Propeller Repeat 371 407 1.8E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Pfam PF07676 WD40-like Beta Propeller Repeat 284 319 8.5E-12 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Pfam PF07676 WD40-like Beta Propeller Repeat 328 361 2.4E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 Gene3D G3DSA:2.120.10.30 167 435 1.6E-78 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu3714 8b79cefbb76aa0e57c88330eb0464456 435 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 20 431 6.3E-156 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 SUPERFAMILY SSF52540 3 305 1.64E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2233 7c71e68439de4bc6d3f5636f41227657 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 42.95 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 Gene3D G3DSA:3.40.50.300 4 282 4.0E-147 T 14-10-2018 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 3.3E-149 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 5.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 5.8E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 SUPERFAMILY SSF81271 283 364 1.35E-33 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 PIRSF PIRSF006641 1 367 2.5E-154 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 Gene3D G3DSA:1.10.150.300 114 203 4.0E-147 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 Gene3D G3DSA:3.10.20.30 49 365 4.0E-147 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu2233 7c71e68439de4bc6d3f5636f41227657 367 Pfam PF01926 50S ribosome-binding GTPase 5 119 4.2E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2233 7c71e68439de4bc6d3f5636f41227657 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 1.2E-37 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Atu4439 506b348ab0c896505b712649fa3d4d80 316 Gene3D G3DSA:1.10.3720.10 86 304 5.6E-29 T 14-10-2018 IPR035906 MetI-like superfamily Atu4439 506b348ab0c896505b712649fa3d4d80 316 SUPERFAMILY SSF161098 90 298 6.93E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu4439 506b348ab0c896505b712649fa3d4d80 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 5.9E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 Gene3D G3DSA:1.20.120.530 84 222 5.8E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 SUPERFAMILY SSF48008 87 222 3.14E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 SMART SM00895 90 214 1.4E-8 T 14-10-2018 IPR011711 GntR, C-terminal Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 71 1.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 SUPERFAMILY SSF46785 17 84 5.45E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 Gene3D G3DSA:1.10.10.10 16 81 4.9E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 SMART SM00345 22 80 2.0E-4 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5125 e892a1e16fcd368cca78b4a19ad1ffc0 229 Pfam PF07729 FCD domain 90 212 9.4E-17 T 14-10-2018 IPR011711 GntR, C-terminal Atu5349 19252146233d64618d19ef4533df9a25 162 Pfam PF08447 PAS fold 28 117 1.1E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu5349 19252146233d64618d19ef4533df9a25 162 SUPERFAMILY SSF55785 6 114 4.19E-11 T 14-10-2018 IPR035965 PAS domain superfamily Atu5349 19252146233d64618d19ef4533df9a25 162 Gene3D G3DSA:3.30.450.20 3 118 4.8E-15 T 14-10-2018 Atu3073 51e75a9d7a67e7305560a9de2fd26924 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 5.2E-59 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Atu3073 51e75a9d7a67e7305560a9de2fd26924 230 SUPERFAMILY SSF53681 1 116 3.05E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu3073 51e75a9d7a67e7305560a9de2fd26924 230 Gene3D G3DSA:3.40.50.1860 4 223 2.6E-74 T 14-10-2018 Atu3073 51e75a9d7a67e7305560a9de2fd26924 230 SUPERFAMILY SSF53681 119 228 9.16E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu3073 51e75a9d7a67e7305560a9de2fd26924 230 Gene3D G3DSA:3.40.50.1860 104 214 2.6E-74 T 14-10-2018 Atu3073 51e75a9d7a67e7305560a9de2fd26924 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 2.6E-48 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu6043 276364cab9a77ead3048e3c8f404a4c4 405 TIGRFAM TIGR03453 partition_RepA: plasmid partitioning protein RepA 18 404 2.6E-195 T 14-10-2018 IPR017818 Plasmid partitioning protein, RepA Atu6043 276364cab9a77ead3048e3c8f404a4c4 405 Gene3D G3DSA:3.40.50.300 122 402 6.2E-68 T 14-10-2018 Atu6043 276364cab9a77ead3048e3c8f404a4c4 405 Pfam PF13614 AAA domain 122 297 3.8E-37 T 14-10-2018 IPR025669 AAA domain Atu6043 276364cab9a77ead3048e3c8f404a4c4 405 SUPERFAMILY SSF52540 121 369 1.27E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0736 195028f3efba8740b40f49a65ecc066f 250 SUPERFAMILY SSF55174 8 65 3.83E-13 T 14-10-2018 Atu0736 195028f3efba8740b40f49a65ecc066f 250 Pfam PF01728 FtsJ-like methyltransferase 64 246 3.9E-20 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Atu0736 195028f3efba8740b40f49a65ecc066f 250 Gene3D G3DSA:3.10.290.10 2 66 1.0E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu0736 195028f3efba8740b40f49a65ecc066f 250 Pfam PF01479 S4 domain 8 52 1.5E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu0736 195028f3efba8740b40f49a65ecc066f 250 Gene3D G3DSA:3.40.50.150 67 250 9.1E-65 T 14-10-2018 Atu0736 195028f3efba8740b40f49a65ecc066f 250 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 9 242 3.1E-60 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Atu0736 195028f3efba8740b40f49a65ecc066f 250 SMART SM00363 8 73 2.8E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu0736 195028f3efba8740b40f49a65ecc066f 250 SUPERFAMILY SSF53335 63 245 7.14E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0736 195028f3efba8740b40f49a65ecc066f 250 PIRSF PIRSF005578 3 250 1.2E-86 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Atu2253 17a7f7f986a2f0f2f8f391381ec1dc38 336 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 189 7.8E-60 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Atu2253 17a7f7f986a2f0f2f8f391381ec1dc38 336 Gene3D G3DSA:1.10.8.300 219 334 6.9E-27 T 14-10-2018 Atu2253 17a7f7f986a2f0f2f8f391381ec1dc38 336 PIRSF PIRSF002849 3 336 9.2E-115 T 14-10-2018 Atu2253 17a7f7f986a2f0f2f8f391381ec1dc38 336 Gene3D G3DSA:3.40.50.300 37 206 5.5E-42 T 14-10-2018 Atu2253 17a7f7f986a2f0f2f8f391381ec1dc38 336 SUPERFAMILY SSF52540 26 311 2.09E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 Gene3D G3DSA:1.20.210.10 35 569 7.5E-239 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 48 514 9.3E-153 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 SUPERFAMILY SSF81442 36 568 1.05E-215 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 40 567 3.1E-218 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 292 346 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 423 442 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 156 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 179 191 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 473 494 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 210 228 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 395 413 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 39 64 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 290 311 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 381 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 104 127 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 336 351 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0768 f5233b9ac089f53c2d0a8a837c1b4a1a 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 239 258 9.8E-149 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 Gene3D G3DSA:3.40.50.1470 1 187 1.8E-61 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 SUPERFAMILY SSF53178 1 183 7.46E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 Pfam PF01195 Peptidyl-tRNA hydrolase 3 182 4.6E-50 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 34.281 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Atu2230 76b28ea1677dbe973be1f3c1d13851fa 238 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 183 1.6E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Atu3108 69b24ed47a33b8c63cad7083b127245a 627 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 27 365 2.0E-128 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 Atu3108 69b24ed47a33b8c63cad7083b127245a 627 PIRSF PIRSF014753 5 621 4.9E-216 T 14-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 Hamap MF_01393 ATP synthase subunit a [atpB]. 7 248 15.081 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 PRINTS PR00123 ATP synthase A subunit signature 228 243 7.7E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 PRINTS PR00123 ATP synthase A subunit signature 168 190 7.7E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 PRINTS PR00123 ATP synthase A subunit signature 148 163 7.7E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 PRINTS PR00123 ATP synthase A subunit signature 87 103 7.7E-30 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 ProSitePatterns PS00449 ATP synthase a subunit signature. 171 180 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 SUPERFAMILY SSF81336 78 242 1.96E-45 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 7 244 7.3E-66 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 Gene3D G3DSA:1.20.120.220 79 247 7.8E-33 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0714 35d642fae405835a439eda92fbc9ba4d 249 Pfam PF00119 ATP synthase A chain 32 241 1.7E-54 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu1610 63d0f83c2b732ab04005e814a4c083d4 458 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 446 6.4E-215 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Atu1610 63d0f83c2b732ab04005e814a4c083d4 458 Pfam PF01474 Class-II DAHP synthetase family 5 440 1.0E-203 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Atu1610 63d0f83c2b732ab04005e814a4c083d4 458 SUPERFAMILY SSF51569 2 445 1.03E-199 T 14-10-2018 Atu1610 63d0f83c2b732ab04005e814a4c083d4 458 Gene3D G3DSA:3.20.20.70 177 446 2.0E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1917 e88f91b4479e7f2619ca3268ed7f1596 446 Gene3D G3DSA:3.40.710.10 101 436 1.1E-52 T 14-10-2018 Atu1917 e88f91b4479e7f2619ca3268ed7f1596 446 Pfam PF00144 Beta-lactamase 158 428 3.1E-21 T 14-10-2018 IPR001466 Beta-lactamase-related Atu1917 e88f91b4479e7f2619ca3268ed7f1596 446 SUPERFAMILY SSF56601 114 426 5.63E-60 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu1081 944e811f8260ad8489cf9097c7d41967 273 SUPERFAMILY SSF46689 225 271 2.28E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1081 944e811f8260ad8489cf9097c7d41967 273 Gene3D G3DSA:1.10.10.60 231 273 9.3E-14 T 14-10-2018 Atu1081 944e811f8260ad8489cf9097c7d41967 273 Pfam PF02311 AraC-like ligand binding domain 18 150 1.3E-27 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu1081 944e811f8260ad8489cf9097c7d41967 273 SUPERFAMILY SSF46689 175 223 2.33E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1081 944e811f8260ad8489cf9097c7d41967 273 Gene3D G3DSA:1.10.10.60 169 230 3.4E-15 T 14-10-2018 Atu1081 944e811f8260ad8489cf9097c7d41967 273 SUPERFAMILY SSF51215 5 139 2.88E-19 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu1081 944e811f8260ad8489cf9097c7d41967 273 Pfam PF12833 Helix-turn-helix domain 195 271 4.0E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1081 944e811f8260ad8489cf9097c7d41967 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 5.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu1081 944e811f8260ad8489cf9097c7d41967 273 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 5.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu1081 944e811f8260ad8489cf9097c7d41967 273 SMART SM00342 189 271 2.1E-33 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Gene3D G3DSA:3.40.120.10 2 153 2.0E-50 T 14-10-2018 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Gene3D G3DSA:3.40.120.10 259 342 2.6E-65 T 14-10-2018 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Gene3D G3DSA:3.30.310.50 373 449 1.1E-22 T 14-10-2018 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Gene3D G3DSA:3.40.120.10 176 365 2.6E-65 T 14-10-2018 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 SUPERFAMILY SSF55957 361 446 1.31E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 6.3E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 3.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 3.3E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 SUPERFAMILY SSF53738 260 368 6.28E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 3.2E-195 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 442 8.2E-15 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 7.2E-44 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 3.3E-33 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 SUPERFAMILY SSF53738 2 183 1.1E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 47.925 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3709 8f603d43bddc48e7cd252b1cc7501378 450 SUPERFAMILY SSF53738 159 259 2.75E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2822 9239e1133282724a40844ca043b6f139 510 SMART SM00858 15 84 1.9E-12 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu2822 9239e1133282724a40844ca043b6f139 510 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 110 508 1.1E-161 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 Atu2822 9239e1133282724a40844ca043b6f139 510 Pfam PF08666 SAF domain 15 83 8.4E-14 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu2822 9239e1133282724a40844ca043b6f139 510 Gene3D G3DSA:3.90.1210.30 7 85 8.2E-23 T 14-10-2018 Atu1089 2840704f1b0a1b2060cf2754ea01dd8f 324 Pfam PF09991 Predicted membrane protein (DUF2232) 29 303 3.7E-6 T 14-10-2018 IPR018710 Protein of unknown function DUF2232 Atu2070 449e48cde5ef4756419923edb7aeae03 613 SUPERFAMILY SSF53092 180 296 1.34E-5 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2070 449e48cde5ef4756419923edb7aeae03 613 Gene3D G3DSA:3.40.350.10 157 304 7.8E-24 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2070 449e48cde5ef4756419923edb7aeae03 613 Gene3D G3DSA:3.90.230.10 312 613 4.8E-93 T 14-10-2018 Atu2070 449e48cde5ef4756419923edb7aeae03 613 Gene3D G3DSA:3.40.350.10 10 156 3.1E-34 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2070 449e48cde5ef4756419923edb7aeae03 613 Pfam PF00557 Metallopeptidase family M24 325 538 5.8E-44 T 14-10-2018 IPR000994 Peptidase M24 Atu2070 449e48cde5ef4756419923edb7aeae03 613 Pfam PF16188 C-terminal region of peptidase_M24 549 609 1.7E-24 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain Atu2070 449e48cde5ef4756419923edb7aeae03 613 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 145 1.7E-17 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Atu2070 449e48cde5ef4756419923edb7aeae03 613 SUPERFAMILY SSF53092 15 139 3.66E-9 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2070 449e48cde5ef4756419923edb7aeae03 613 Pfam PF16189 Creatinase/Prolidase N-terminal domain 158 318 1.1E-32 T 14-10-2018 Atu2070 449e48cde5ef4756419923edb7aeae03 613 SUPERFAMILY SSF55920 315 574 1.3E-56 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 351 2.2E-71 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 SUPERFAMILY SSF111369 49 259 2.75E-26 T 14-10-2018 Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 Gene3D G3DSA:2.40.420.20 41 350 3.1E-63 T 14-10-2018 Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 Gene3D G3DSA:1.10.287.470 91 163 3.1E-63 T 14-10-2018 Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 Gene3D G3DSA:2.40.30.170 42 278 3.1E-63 T 14-10-2018 Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 260 1.0E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu3797 f27f6ee7dbaf1d3e5d731c370f61ef5d 358 Gene3D G3DSA:2.40.50.100 57 203 3.1E-63 T 14-10-2018 Atu0175 269520d816326178e39c914e00bb707b 205 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu0175 269520d816326178e39c914e00bb707b 205 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 2 203 7.3E-108 T 14-10-2018 IPR017694 Phosphonate metabolism protein, transferase hexapeptide repeat family Atu0175 269520d816326178e39c914e00bb707b 205 Gene3D G3DSA:2.160.10.10 8 204 1.0E-51 T 14-10-2018 Atu0175 269520d816326178e39c914e00bb707b 205 SUPERFAMILY SSF51161 5 200 3.93E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu0175 269520d816326178e39c914e00bb707b 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 142 2.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 Pfam PF03466 LysR substrate binding domain 88 294 1.2E-33 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 SUPERFAMILY SSF46785 1 86 1.76E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 Gene3D G3DSA:1.10.10.10 1 92 1.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 Gene3D G3DSA:3.40.190.10 167 270 1.6E-39 T 14-10-2018 Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 SUPERFAMILY SSF53850 91 297 2.9E-29 T 14-10-2018 Atu3355 23ed7c21c5a3a2c83644b4c0ab3fee5b 299 Gene3D G3DSA:3.40.190.10 94 287 1.6E-39 T 14-10-2018 Atu2064 047279f9913a8482a8451fe717e2b381 428 Pfam PF10908 Protein of unknown function (DUF2778) 295 398 5.0E-24 T 14-10-2018 IPR021225 Protein of unknown function DUF2778 Atu5004 b7782a4355914e03ef3d022d80129db4 335 Gene3D G3DSA:3.30.360.10 124 334 3.1E-51 T 14-10-2018 Atu5004 b7782a4355914e03ef3d022d80129db4 335 SUPERFAMILY SSF51735 3 159 6.73E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5004 b7782a4355914e03ef3d022d80129db4 335 SUPERFAMILY SSF55347 130 301 3.11E-39 T 14-10-2018 Atu5004 b7782a4355914e03ef3d022d80129db4 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 4.6E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu5004 b7782a4355914e03ef3d022d80129db4 335 Gene3D G3DSA:3.40.50.720 1 120 2.2E-38 T 14-10-2018 Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 Gene3D G3DSA:1.10.10.10 832 896 9.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 SUPERFAMILY SSF46785 835 898 4.08E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 SUPERFAMILY SSF52540 488 797 3.77E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 Gene3D G3DSA:3.40.50.300 504 811 3.6E-115 T 14-10-2018 Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 SMART SM00843 835 900 6.6E-36 T 14-10-2018 IPR018541 FtsK gamma domain Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 Gene3D G3DSA:3.30.980.40 399 503 7.4E-30 T 14-10-2018 Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 Pfam PF01580 FtsK/SpoIIIE family 507 726 4.3E-64 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Atu3210 4bad6ed736de26936fa13a60a951a7c0 910 Pfam PF09397 Ftsk gamma domain 837 896 9.3E-26 T 14-10-2018 IPR018541 FtsK gamma domain Atu5264 8d5694271236a0e0796b0d1be8d5530a 362 SUPERFAMILY SSF161098 129 351 5.49E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu5264 8d5694271236a0e0796b0d1be8d5530a 362 SUPERFAMILY SSF161098 12 70 1.18E-5 T 14-10-2018 IPR035906 MetI-like superfamily Atu5264 8d5694271236a0e0796b0d1be8d5530a 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 352 3.7E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5264 8d5694271236a0e0796b0d1be8d5530a 362 Gene3D G3DSA:1.10.3720.10 8 78 1.0E-6 T 14-10-2018 IPR035906 MetI-like superfamily Atu5264 8d5694271236a0e0796b0d1be8d5530a 362 Gene3D G3DSA:1.10.3720.10 120 362 2.2E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00387 793 909 1.8E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF55874 735 911 3.8E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 793 907 7.7E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00388 681 746 2.6E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF52172 1099 1226 9.11E-36 T 14-10-2018 IPR011006 CheY-like superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00448 1098 1215 1.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00448 926 1044 2.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF12860 PAS fold 555 665 1.5E-9 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF12860 PAS fold 417 529 3.2E-6 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF12860 PAS fold 152 266 2.1E-10 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:3.30.450.20 400 536 1.1E-8 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:3.30.450.20 271 399 3.4E-13 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:3.30.450.20 537 666 1.1E-5 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF55785 274 387 2.97E-15 T 14-10-2018 IPR035965 PAS domain superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00091 546 612 11.0 T 14-10-2018 IPR000014 PAS domain Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00091 277 342 9.7E-4 T 14-10-2018 IPR000014 PAS domain Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00091 18 85 22.0 T 14-10-2018 IPR000014 PAS domain Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SMART SM00091 408 476 3.1 T 14-10-2018 IPR000014 PAS domain Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:3.40.50.12740 1098 1230 2.4E-40 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:3.40.50.12740 925 1094 2.1E-27 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF52172 924 1055 1.71E-26 T 14-10-2018 IPR011006 CheY-like superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 862 7.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 869 887 7.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 893 906 7.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 848 7.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF08448 PAS fold 283 383 1.3E-10 T 14-10-2018 IPR013656 PAS fold-4 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:3.30.565.10 748 914 2.5E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Gene3D G3DSA:1.10.287.130 667 747 3.1E-26 T 14-10-2018 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 396 1.1E-7 T 14-10-2018 IPR000014 PAS domain Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF00512 His Kinase A (phospho-acceptor) domain 681 746 6.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF00072 Response regulator receiver domain 1100 1215 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 Pfam PF00072 Response regulator receiver domain 928 1042 2.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF47384 666 748 2.55E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF55785 563 670 1.08E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu2332 7789698eb2c110c549888cd5358db3f5 1231 SUPERFAMILY SSF55785 397 463 1.1E-7 T 14-10-2018 IPR035965 PAS domain superfamily Atu1099 eebd6114da2b51eb13eb63a0fecd1d37 406 Gene3D G3DSA:1.10.8.1150 89 162 1.0E-12 T 14-10-2018 Atu1099 eebd6114da2b51eb13eb63a0fecd1d37 406 Gene3D G3DSA:3.30.160.60 347 383 1.1E-16 T 14-10-2018 Atu1099 eebd6114da2b51eb13eb63a0fecd1d37 406 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 197 375 6.5E-60 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Atu1099 eebd6114da2b51eb13eb63a0fecd1d37 406 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 59 375 34.567 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Atu1099 eebd6114da2b51eb13eb63a0fecd1d37 406 Pfam PF02618 YceG-like family 94 371 4.1E-84 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Atu2134 9a4bdcae5334394c5cb7c51f9757a5e1 402 SUPERFAMILY SSF103473 18 398 6.28E-49 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2134 9a4bdcae5334394c5cb7c51f9757a5e1 402 Gene3D G3DSA:1.20.1250.20 17 400 1.3E-40 T 14-10-2018 Atu2134 9a4bdcae5334394c5cb7c51f9757a5e1 402 Pfam PF07690 Major Facilitator Superfamily 25 336 1.8E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 TIGRFAM TIGR02768 TraA_Ti: Ti-type conjugative transfer relaxase TraA 1 780 0.0 T 14-10-2018 IPR014136 Ti-type conjugative transfer relaxase TraA Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 Gene3D G3DSA:2.30.30.940 638 728 9.8E-56 T 14-10-2018 Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 SUPERFAMILY SSF52540 286 561 2.62E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 Gene3D G3DSA:3.30.930.30 2 227 8.3E-62 T 14-10-2018 Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 Gene3D G3DSA:3.40.50.300 543 775 9.8E-56 T 14-10-2018 Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 SUPERFAMILY SSF48371 1069 1191 6.33E-6 T 14-10-2018 IPR016024 Armadillo-type fold Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 Pfam PF03389 MobA/MobL family 17 249 3.7E-75 T 14-10-2018 IPR005053 MobA/MobL protein Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 Gene3D G3DSA:3.40.50.300 386 542 9.8E-56 T 14-10-2018 Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 SUPERFAMILY SSF52540 500 777 1.0E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5111 0a8fd6e4dca43ccae077936d75293637 1542 Pfam PF13604 AAA domain 390 578 2.0E-53 T 14-10-2018 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 Gene3D G3DSA:3.40.50.10490 10 220 1.2E-91 T 14-10-2018 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 Pfam PF00318 Ribosomal protein S2 11 225 6.0E-97 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.5E-38 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 Gene3D G3DSA:1.10.287.610 105 151 1.2E-91 T 14-10-2018 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 225 7.5E-101 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 235 41.893 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1374 64b3dd8da6f5f9d5bcb7e567470cd4a5 255 SUPERFAMILY SSF52313 8 231 7.98E-93 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Atu3801 8f622fc44562b4005874a7c4285588ea 285 Gene3D G3DSA:1.10.3720.10 86 277 5.4E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu3801 8f622fc44562b4005874a7c4285588ea 285 SUPERFAMILY SSF161098 87 271 1.44E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu3801 8f622fc44562b4005874a7c4285588ea 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 271 1.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0545 724b081f3e0f42078a8d393468de2288 306 Pfam PF00700 Bacterial flagellin C-terminal helical region 223 305 5.4E-18 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0545 724b081f3e0f42078a8d393468de2288 306 Gene3D G3DSA:1.20.1330.10 42 258 1.6E-10 T 14-10-2018 Atu0545 724b081f3e0f42078a8d393468de2288 306 Gene3D G3DSA:1.10.8.410 259 306 2.0E-5 T 14-10-2018 Atu0545 724b081f3e0f42078a8d393468de2288 306 SUPERFAMILY SSF64518 1 306 1.24E-61 T 14-10-2018 Atu0545 724b081f3e0f42078a8d393468de2288 306 PRINTS PR00207 Flagellin signature 107 130 5.0E-7 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0545 724b081f3e0f42078a8d393468de2288 306 PRINTS PR00207 Flagellin signature 36 53 5.0E-7 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0545 724b081f3e0f42078a8d393468de2288 306 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 134 3.0E-28 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu1699 1c9e5f01e29f037f04d01a3cbd733184 171 Gene3D G3DSA:3.40.50.300 8 162 4.2E-55 T 14-10-2018 Atu1699 1c9e5f01e29f037f04d01a3cbd733184 171 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 139 7.0E-50 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Atu1699 1c9e5f01e29f037f04d01a3cbd733184 171 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 6 164 6.1E-58 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Atu1699 1c9e5f01e29f037f04d01a3cbd733184 171 SUPERFAMILY SSF52540 5 164 3.07E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1699 1c9e5f01e29f037f04d01a3cbd733184 171 Gene3D G3DSA:2.20.25.120 50 82 4.2E-55 T 14-10-2018 Atu4307 e6767cb50dd3b79926855019f2045e67 322 SMART SM00849 89 297 2.0E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu4307 e6767cb50dd3b79926855019f2045e67 322 SUPERFAMILY SSF56281 32 320 2.1E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu4307 e6767cb50dd3b79926855019f2045e67 322 Gene3D G3DSA:3.60.15.10 28 322 1.5E-78 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu4307 e6767cb50dd3b79926855019f2045e67 322 Pfam PF00753 Metallo-beta-lactamase superfamily 91 297 1.1E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu6113 f67285a09c2bca6975df0f58bcef163e 192 Pfam PF06414 Zeta toxin 2 133 5.0E-6 T 14-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 Atu6113 f67285a09c2bca6975df0f58bcef163e 192 Gene3D G3DSA:3.40.50.300 1 178 5.1E-16 T 14-10-2018 Atu6113 f67285a09c2bca6975df0f58bcef163e 192 SUPERFAMILY SSF52540 2 163 2.83E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3997 904c0c327972740285237af993e55785 339 Pfam PF04055 Radical SAM superfamily 65 219 8.1E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu3997 904c0c327972740285237af993e55785 339 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 235 326 8.8E-19 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atu3997 904c0c327972740285237af993e55785 339 Gene3D G3DSA:3.20.20.70 20 330 3.5E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3997 904c0c327972740285237af993e55785 339 SUPERFAMILY SSF102114 22 328 4.58E-90 T 14-10-2018 Atu3997 904c0c327972740285237af993e55785 339 PIRSF PIRSF001619 3 334 1.1E-131 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atu3997 904c0c327972740285237af993e55785 339 Hamap MF_01694 Biotin synthase [bioB]. 20 328 41.674 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atu3997 904c0c327972740285237af993e55785 339 TIGRFAM TIGR00433 bioB: biotin synthase 30 326 5.1E-122 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atu3997 904c0c327972740285237af993e55785 339 SMART SM00729 58 270 2.6E-45 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu3997 904c0c327972740285237af993e55785 339 SMART SM00876 235 327 1.9E-43 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Atu4146 b57949484208fdc40df86c203361ed50 625 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 248 613 3.7E-139 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA Atu4146 b57949484208fdc40df86c203361ed50 625 Pfam PF08014 Domain of unknown function (DUF1704) 274 615 5.0E-101 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 Atu4146 b57949484208fdc40df86c203361ed50 625 SMART SM01154 273 621 4.7E-142 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 Atu5059 1f8b0c5e2101527f03b39668fa0fc3bd 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 275 4.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5059 1f8b0c5e2101527f03b39668fa0fc3bd 289 SUPERFAMILY SSF161098 49 275 3.53E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu5059 1f8b0c5e2101527f03b39668fa0fc3bd 289 Gene3D G3DSA:1.10.3720.10 45 285 1.4E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 SUPERFAMILY SSF64518 1 429 7.32E-64 T 14-10-2018 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 Gene3D G3DSA:1.10.8.410 383 430 3.7E-5 T 14-10-2018 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 136 2.9E-29 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 PRINTS PR00207 Flagellin signature 75 94 5.0E-8 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 PRINTS PR00207 Flagellin signature 36 53 5.0E-8 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 PRINTS PR00207 Flagellin signature 107 130 5.0E-8 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 Pfam PF00700 Bacterial flagellin C-terminal helical region 345 429 9.4E-18 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0567 48c830be477eeeb5192bb0db69f3e9c2 430 Gene3D G3DSA:1.20.1330.10 43 184 5.7E-10 T 14-10-2018 Atu4679 9fbea22e478bba6635065719db9d9f41 221 Gene3D G3DSA:1.10.3720.10 4 219 5.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu4679 9fbea22e478bba6635065719db9d9f41 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 218 3.8E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4679 9fbea22e478bba6635065719db9d9f41 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 112 1.7E-30 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4679 9fbea22e478bba6635065719db9d9f41 221 SUPERFAMILY SSF161098 16 204 8.9E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu4678 1ccb494de078875ca0fb7a856ed5a7a0 268 SUPERFAMILY SSF53850 1 257 1.88E-59 T 14-10-2018 Atu4678 1ccb494de078875ca0fb7a856ed5a7a0 268 Gene3D G3DSA:3.40.190.10 117 219 1.3E-55 T 14-10-2018 Atu4678 1ccb494de078875ca0fb7a856ed5a7a0 268 Gene3D G3DSA:3.40.190.10 31 253 1.3E-55 T 14-10-2018 Atu4678 1ccb494de078875ca0fb7a856ed5a7a0 268 SMART SM00062 33 257 1.1E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4678 1ccb494de078875ca0fb7a856ed5a7a0 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 255 1.5E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1038 e37264b3234d733acfc8ce011ddf5388 125 SUPERFAMILY SSF52172 3 117 2.85E-16 T 14-10-2018 IPR011006 CheY-like superfamily Atu1038 e37264b3234d733acfc8ce011ddf5388 125 Pfam PF00072 Response regulator receiver domain 6 85 6.8E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1038 e37264b3234d733acfc8ce011ddf5388 125 SMART SM00448 4 112 0.002 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1038 e37264b3234d733acfc8ce011ddf5388 125 Gene3D G3DSA:3.40.50.2300 2 123 5.9E-30 T 14-10-2018 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 SUPERFAMILY SSF46689 236 286 1.39E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 2.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 2.2E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 SMART SM00342 200 284 1.0E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 Gene3D G3DSA:1.10.10.60 234 287 1.5E-15 T 14-10-2018 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 Gene3D G3DSA:2.60.120.280 26 167 5.1E-8 T 14-10-2018 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 Pfam PF12833 Helix-turn-helix domain 206 285 4.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 Gene3D G3DSA:1.10.10.60 181 233 3.8E-13 T 14-10-2018 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 SUPERFAMILY SSF51215 16 166 3.4E-20 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 SUPERFAMILY SSF46689 184 234 9.27E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 280 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4659 a0a6c1068519e39691ec97d2b23ad3a6 295 Pfam PF02311 AraC-like ligand binding domain 43 164 3.3E-22 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 SMART SM00382 27 210 4.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 SUPERFAMILY SSF50331 235 356 2.98E-25 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 Gene3D G3DSA:3.40.50.300 3 220 6.6E-64 T 14-10-2018 Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 SUPERFAMILY SSF52540 3 241 3.64E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 Gene3D G3DSA:2.40.50.940 221 350 1.5E-30 T 14-10-2018 Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 Pfam PF08402 TOBE domain 280 349 9.0E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 Gene3D G3DSA:2.40.50.140 287 341 1.5E-30 T 14-10-2018 Atu3103 7f76e4069a05fd79377a1bc2fd9bf589 357 Pfam PF00005 ABC transporter 19 160 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2428 1980a86154ba456f8d56a05a594a7182 280 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 96 109 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu2428 1980a86154ba456f8d56a05a594a7182 280 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 19 271 6.8E-84 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Atu2428 1980a86154ba456f8d56a05a594a7182 280 Pfam PF00459 Inositol monophosphatase family 18 256 4.8E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu2428 1980a86154ba456f8d56a05a594a7182 280 SUPERFAMILY SSF56655 18 257 2.88E-66 T 14-10-2018 Atu2428 1980a86154ba456f8d56a05a594a7182 280 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 19 273 36.929 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Atu2428 1980a86154ba456f8d56a05a594a7182 280 Gene3D G3DSA:3.30.540.10 16 167 5.3E-37 T 14-10-2018 Atu2428 1980a86154ba456f8d56a05a594a7182 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 8.9E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu2428 1980a86154ba456f8d56a05a594a7182 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 224 248 8.9E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu2428 1980a86154ba456f8d56a05a594a7182 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 51 71 8.9E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu2428 1980a86154ba456f8d56a05a594a7182 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 154 177 8.9E-16 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu2428 1980a86154ba456f8d56a05a594a7182 280 Gene3D G3DSA:3.40.190.80 168 274 4.4E-30 T 14-10-2018 Atu2428 1980a86154ba456f8d56a05a594a7182 280 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 227 241 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Atu4210 8f4048381b424291c04916d244b6412f 352 Gene3D G3DSA:1.10.3720.10 91 340 1.5E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu4210 8f4048381b424291c04916d244b6412f 352 SUPERFAMILY SSF161098 25 352 6.64E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu4210 8f4048381b424291c04916d244b6412f 352 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 186 342 3.3E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6179 e81fe02e063c55e1825e8170717a5cdb 202 Gene3D G3DSA:3.30.70.1760 82 202 4.0E-58 T 14-10-2018 IPR038473 VirC2, C-terminal domain superfamily Atu6179 e81fe02e063c55e1825e8170717a5cdb 202 ProDom PD022944 PLASMID VIRC2 CROWN TUMOR GALL RIORF165 TIORF153 1 200 2.0E-113 T 14-10-2018 IPR009841 VirC2 Atu6179 e81fe02e063c55e1825e8170717a5cdb 202 Pfam PF07181 VirC2 protein 1 200 5.5E-122 T 14-10-2018 IPR009841 VirC2 Atu6179 e81fe02e063c55e1825e8170717a5cdb 202 PIRSF PIRSF016094 1 202 1.7E-113 T 14-10-2018 IPR009841 VirC2 Atu6179 e81fe02e063c55e1825e8170717a5cdb 202 SUPERFAMILY SSF47598 82 201 1.09E-63 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 SUPERFAMILY SSF51735 112 276 5.73E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 14 277 1.5E-67 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 SUPERFAMILY SSF53223 7 111 5.53E-27 T 14-10-2018 Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 281 32.013 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 99 4.1E-26 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 Gene3D G3DSA:3.40.50.10860 14 268 1.1E-74 T 14-10-2018 Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 129 200 7.6E-10 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Atu0003 c4664ad384f14c4d3d5415a213dbfc36 286 Gene3D G3DSA:3.40.50.720 111 248 1.1E-74 T 14-10-2018 Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 9.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 9.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 9.6E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 SUPERFAMILY SSF51735 6 242 2.74E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 Gene3D G3DSA:3.40.50.720 2 242 1.6E-75 T 14-10-2018 Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 242 1.2E-58 T 14-10-2018 Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 7.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 7.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4466 ba75ecc7bb4958bfcd8fa5c4c9c12534 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 7.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0726 cf257810f466519b71cda910d3bede2d 414 SUPERFAMILY SSF50022 11 153 4.06E-48 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 Gene3D G3DSA:3.90.380.10 14 396 1.2E-162 T 14-10-2018 Atu0726 cf257810f466519b71cda910d3bede2d 414 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 85 108 - T 14-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 6.5E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 6.5E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 6.5E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 6.5E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 6.5E-24 T 14-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 177 399 1.4E-39 T 14-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 Gene3D G3DSA:2.102.10.10 40 158 1.2E-162 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atu0726 cf257810f466519b71cda910d3bede2d 414 SUPERFAMILY SSF55961 155 402 8.97E-53 T 14-10-2018 Atu0726 cf257810f466519b71cda910d3bede2d 414 Pfam PF00355 Rieske [2Fe-2S] domain 43 119 5.8E-18 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Atu5165 43b204e3f69a6233c9c9e7b38beb4fcb 757 Gene3D G3DSA:3.40.50.300 548 723 4.9E-23 T 14-10-2018 Atu5165 43b204e3f69a6233c9c9e7b38beb4fcb 757 Gene3D G3DSA:3.40.50.300 373 454 8.9E-7 T 14-10-2018 Atu5165 43b204e3f69a6233c9c9e7b38beb4fcb 757 SMART SM00382 395 668 0.0021 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5165 43b204e3f69a6233c9c9e7b38beb4fcb 757 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 1 753 4.9E-238 T 14-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 Atu5165 43b204e3f69a6233c9c9e7b38beb4fcb 757 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 142 344 3.3E-49 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 Atu5165 43b204e3f69a6233c9c9e7b38beb4fcb 757 SUPERFAMILY SSF52540 356 683 3.01E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu8119 2f10d8a374bb397f2f15cd8ea86564db 135 SUPERFAMILY SSF50346 5 134 1.37E-30 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Atu8119 2f10d8a374bb397f2f15cd8ea86564db 135 Gene3D G3DSA:2.30.30.240 15 106 1.7E-28 T 14-10-2018 Atu8119 2f10d8a374bb397f2f15cd8ea86564db 135 Pfam PF05239 PRC-barrel domain 28 101 3.1E-15 T 14-10-2018 IPR027275 PRC-barrel domain Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 SUPERFAMILY SSF52172 1 174 3.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 Gene3D G3DSA:3.40.50.2300 1 118 2.2E-34 T 14-10-2018 Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 SMART SM00448 1 112 2.2E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 Gene3D G3DSA:1.10.10.10 119 227 1.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 6.6E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2434 0f7be0f47bd82a7a4562995112663bc0 234 SMART SM00862 145 221 1.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Gene3D G3DSA:3.40.50.2000 417 595 4.3E-124 T 14-10-2018 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Gene3D G3DSA:1.25.40.10 141 196 8.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3976 4b6319aeedbed635404bf66ba657d343 681 SMART SM00028 65 98 0.33 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3976 4b6319aeedbed635404bf66ba657d343 681 SMART SM00028 141 174 0.24 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Gene3D G3DSA:3.40.50.11380 249 600 4.3E-124 T 14-10-2018 Atu3976 4b6319aeedbed635404bf66ba657d343 681 SUPERFAMILY SSF48452 37 177 4.88E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Pfam PF13844 Glycosyl transferase family 41 420 612 7.2E-38 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Pfam PF13844 Glycosyl transferase family 41 260 400 8.0E-31 T 14-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Gene3D G3DSA:1.25.40.10 16 140 2.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Pfam PF13181 Tetratricopeptide repeat 144 173 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3976 4b6319aeedbed635404bf66ba657d343 681 Pfam PF13181 Tetratricopeptide repeat 67 97 0.0018 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3971 dabe3183c915c0012831a4c09d64d8ce 574 Gene3D G3DSA:3.50.30.80 375 529 1.3E-47 T 14-10-2018 Atu3971 dabe3183c915c0012831a4c09d64d8ce 574 SUPERFAMILY SSF52016 376 561 1.41E-58 T 14-10-2018 Atu3971 dabe3183c915c0012831a4c09d64d8ce 574 SUPERFAMILY SSF143975 4 374 4.84E-123 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu3971 dabe3183c915c0012831a4c09d64d8ce 574 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu3971 dabe3183c915c0012831a4c09d64d8ce 574 Pfam PF00920 Dehydratase family 39 555 8.0E-178 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu2072 4693b552cc9c62a1a56d031f942ace26 292 PIRSF PIRSF000401 8 292 4.7E-64 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Atu2072 4693b552cc9c62a1a56d031f942ace26 292 SUPERFAMILY SSF53335 39 291 1.79E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2072 4693b552cc9c62a1a56d031f942ace26 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 27 291 6.3E-65 T 14-10-2018 Atu2072 4693b552cc9c62a1a56d031f942ace26 292 Gene3D G3DSA:3.40.50.150 95 292 5.5E-49 T 14-10-2018 Atu2072 4693b552cc9c62a1a56d031f942ace26 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 29.738 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Atu3974 a3ef2264809c13677a5818c880d2d596 1731 Gene3D G3DSA:3.80.10.10 1015 1286 1.0E-23 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3974 a3ef2264809c13677a5818c880d2d596 1731 Gene3D G3DSA:3.80.10.10 614 1009 5.9E-25 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3974 a3ef2264809c13677a5818c880d2d596 1731 Gene3D G3DSA:3.80.10.10 2 266 3.8E-16 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3974 a3ef2264809c13677a5818c880d2d596 1731 Gene3D G3DSA:3.80.10.10 1287 1729 1.3E-27 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu3974 a3ef2264809c13677a5818c880d2d596 1731 Gene3D G3DSA:3.80.10.10 351 613 2.4E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily Atu4423 edea62086eb8e57c4a2581a9664fe2b4 259 Gene3D G3DSA:1.10.3720.10 1 251 6.2E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu4423 edea62086eb8e57c4a2581a9664fe2b4 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 246 1.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4423 edea62086eb8e57c4a2581a9664fe2b4 259 SUPERFAMILY SSF161098 3 253 1.96E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu0770 1667ffb74f78902e52dc185f81e7d28b 205 PIRSF PIRSF005413 3 200 3.2E-73 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0770 1667ffb74f78902e52dc185f81e7d28b 205 Gene3D G3DSA:2.60.370.10 59 202 1.8E-55 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0770 1667ffb74f78902e52dc185f81e7d28b 205 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 39 183 7.9E-53 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0770 1667ffb74f78902e52dc185f81e7d28b 205 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 190 43.138 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0770 1667ffb74f78902e52dc185f81e7d28b 205 SUPERFAMILY SSF110111 60 187 1.7E-49 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu5260 625c4707fa16197a61ae4a632723b148 373 Pfam PF00144 Beta-lactamase 76 331 2.7E-21 T 14-10-2018 IPR001466 Beta-lactamase-related Atu5260 625c4707fa16197a61ae4a632723b148 373 SUPERFAMILY SSF56601 26 333 4.58E-55 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu5260 625c4707fa16197a61ae4a632723b148 373 Gene3D G3DSA:3.40.710.10 26 342 3.2E-52 T 14-10-2018 Atu6089 6af2a7fd4267d0332f01359360e518ff 395 Pfam PF00581 Rhodanese-like domain 13 107 1.7E-9 T 14-10-2018 IPR001763 Rhodanese-like domain Atu6089 6af2a7fd4267d0332f01359360e518ff 395 Pfam PF00581 Rhodanese-like domain 137 230 1.6E-6 T 14-10-2018 IPR001763 Rhodanese-like domain Atu6089 6af2a7fd4267d0332f01359360e518ff 395 SMART SM00450 136 234 1.4E-4 T 14-10-2018 IPR001763 Rhodanese-like domain Atu6089 6af2a7fd4267d0332f01359360e518ff 395 SMART SM00450 11 110 7.4E-12 T 14-10-2018 IPR001763 Rhodanese-like domain Atu6089 6af2a7fd4267d0332f01359360e518ff 395 Gene3D G3DSA:3.40.250.10 271 325 1.3E-7 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu6089 6af2a7fd4267d0332f01359360e518ff 395 Gene3D G3DSA:3.40.250.10 18 115 3.6E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu6089 6af2a7fd4267d0332f01359360e518ff 395 SUPERFAMILY SSF52821 111 240 6.81E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu6089 6af2a7fd4267d0332f01359360e518ff 395 Gene3D G3DSA:3.40.250.10 134 239 4.9E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu6089 6af2a7fd4267d0332f01359360e518ff 395 SUPERFAMILY SSF52821 259 320 1.03E-9 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu6089 6af2a7fd4267d0332f01359360e518ff 395 SUPERFAMILY SSF52821 17 126 4.85E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 Pfam PF03466 LysR substrate binding domain 98 301 4.2E-41 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 Gene3D G3DSA:3.40.190.10 175 280 1.2E-59 T 14-10-2018 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 SUPERFAMILY SSF53850 99 300 4.75E-36 T 14-10-2018 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 SUPERFAMILY SSF46785 13 97 3.99E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 8.6E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 Gene3D G3DSA:3.40.190.10 102 298 1.2E-59 T 14-10-2018 Atu4021 2f340fea748daa32fd1a86fc5b99d042 303 Gene3D G3DSA:1.10.10.10 12 101 3.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 Pfam PF14821 Threonine synthase N terminus 60 138 8.0E-27 T 14-10-2018 IPR029144 Threonine synthase, N-terminal Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 160 174 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 Gene3D G3DSA:3.40.50.1100 155 487 5.8E-152 T 14-10-2018 Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 157 465 1.3E-15 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 Gene3D G3DSA:3.90.1380.10 56 144 1.2E-29 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 Gene3D G3DSA:3.40.50.1100 166 500 5.8E-152 T 14-10-2018 Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 TIGRFAM TIGR00260 thrC: threonine synthase 128 478 4.0E-85 T 14-10-2018 IPR004450 Threonine synthase-like Atu0787 c104a4f88eb173b9742ab17a7e48946f 523 SUPERFAMILY SSF53686 58 517 1.39E-166 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 SUPERFAMILY SSF116726 136 227 1.19E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Gene3D G3DSA:3.30.70.1450 371 458 1.9E-23 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Gene3D G3DSA:3.40.50.720 234 370 7.9E-32 T 14-10-2018 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 SUPERFAMILY SSF51735 1 152 1.26E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 SUPERFAMILY SSF51735 234 380 2.44E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Pfam PF02254 TrkA-N domain 3 126 9.3E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Pfam PF02254 TrkA-N domain 236 354 6.1E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.8E-19 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 SUPERFAMILY SSF116726 367 451 3.79E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Gene3D G3DSA:3.40.50.720 2 140 6.3E-40 T 14-10-2018 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Gene3D G3DSA:3.30.70.1450 141 233 1.2E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Pfam PF02080 TrkA-C domain 162 227 1.4E-6 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atu1449 2ac61390c8034234976bda6d0c09d1e0 458 Pfam PF02080 TrkA-C domain 385 451 2.2E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atu1997 65af8ac1062972850190c91fecca3f57 454 Pfam PF03413 Peptidase propeptide and YPEB domain 79 128 0.0023 T 14-10-2018 IPR025711 PepSY domain Atu1997 65af8ac1062972850190c91fecca3f57 454 Pfam PF03929 PepSY-associated TM region 26 396 2.3E-70 T 14-10-2018 IPR005625 PepSY-associated TM protein Atu3884 1aa04f2c30633f33837baa806ac0b01e 294 SUPERFAMILY SSF53187 11 282 1.51E-82 T 14-10-2018 Atu3884 1aa04f2c30633f33837baa806ac0b01e 294 Pfam PF05013 N-formylglutamate amidohydrolase 22 252 3.2E-68 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase Atu3884 1aa04f2c30633f33837baa806ac0b01e 294 Gene3D G3DSA:3.40.630.40 4 286 1.1E-92 T 14-10-2018 Atu2307 892d3e62d2e91945ae08fc792704bbee 353 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 1.6E-158 T 14-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative Atu2307 892d3e62d2e91945ae08fc792704bbee 353 Pfam PF00296 Luciferase-like monooxygenase 16 301 1.0E-44 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu2307 892d3e62d2e91945ae08fc792704bbee 353 SUPERFAMILY SSF51679 1 340 9.42E-75 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu2307 892d3e62d2e91945ae08fc792704bbee 353 Gene3D G3DSA:3.20.20.30 1 353 3.6E-96 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4033 d833609b95c9b240006390ec7619c57b 338 SUPERFAMILY SSF53822 29 311 2.55E-45 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4033 d833609b95c9b240006390ec7619c57b 338 Pfam PF13407 Periplasmic binding protein domain 31 291 2.1E-42 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4033 d833609b95c9b240006390ec7619c57b 338 Gene3D G3DSA:3.40.50.2300 23 123 9.3E-18 T 14-10-2018 Atu4033 d833609b95c9b240006390ec7619c57b 338 Gene3D G3DSA:3.40.50.2300 129 318 3.9E-22 T 14-10-2018 Atu0778 f5f68fb1aa3d07fdb9966f8f2b5817e8 846 Pfam PF03797 Autotransporter beta-domain 595 827 3.8E-20 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu0778 f5f68fb1aa3d07fdb9966f8f2b5817e8 846 Gene3D G3DSA:2.40.128.130 580 846 3.3E-23 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu0778 f5f68fb1aa3d07fdb9966f8f2b5817e8 846 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 710 829 1.2E-5 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Atu0778 f5f68fb1aa3d07fdb9966f8f2b5817e8 846 SUPERFAMILY SSF103515 595 846 9.55E-26 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu0778 f5f68fb1aa3d07fdb9966f8f2b5817e8 846 SUPERFAMILY SSF69304 80 280 3.01E-6 T 14-10-2018 Atu0778 f5f68fb1aa3d07fdb9966f8f2b5817e8 846 SMART SM00869 580 837 1.7E-12 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 Pfam PF01565 FAD binding domain 53 189 1.0E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 Gene3D G3DSA:3.30.70.2740 346 427 7.5E-11 T 14-10-2018 Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 SUPERFAMILY SSF56176 18 227 1.64E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 SUPERFAMILY SSF55103 233 467 5.89E-71 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 6.5E-67 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 Gene3D G3DSA:3.30.465.40 21 245 1.8E-71 T 14-10-2018 Atu2053 bf2d6431f3b84dd3c3e80a6db2870f04 470 Gene3D G3DSA:1.10.45.10 428 466 1.2E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 164 2.6E-29 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 Gene3D G3DSA:1.10.10.10 1 73 2.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 PIRSF PIRSF019345 1 196 2.2E-48 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 SUPERFAMILY SSF46785 77 152 2.08E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 Gene3D G3DSA:1.10.10.10 74 169 1.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 Pfam PF04079 Segregation and condensation complex subunit ScpB 7 160 7.5E-47 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Atu1707 a0af8f707b554166b3da9e81c912cbc7 216 SUPERFAMILY SSF46785 3 72 8.97E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0838 a839bbbadbae13d5eae5dc48b1127b97 507 Gene3D G3DSA:1.20.1250.20 264 492 5.2E-15 T 14-10-2018 Atu0838 a839bbbadbae13d5eae5dc48b1127b97 507 Pfam PF07690 Major Facilitator Superfamily 23 415 2.7E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu0838 a839bbbadbae13d5eae5dc48b1127b97 507 SUPERFAMILY SSF103473 13 493 1.7E-66 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0838 a839bbbadbae13d5eae5dc48b1127b97 507 Gene3D G3DSA:1.20.1720.10 19 262 3.9E-53 T 14-10-2018 Atu4847 67877ce811ac5181430297e1299247a1 312 PRINTS PR00990 Ribokinase signature 175 190 6.1E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 PRINTS PR00990 Ribokinase signature 34 53 6.1E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 PRINTS PR00990 Ribokinase signature 106 119 6.1E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 PRINTS PR00990 Ribokinase signature 219 230 6.1E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 PRINTS PR00990 Ribokinase signature 7 28 6.1E-33 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 301 2.7E-102 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 Hamap MF_01987 Ribokinase [rbsK]. 3 303 26.016 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Atu4847 67877ce811ac5181430297e1299247a1 312 Pfam PF00294 pfkB family carbohydrate kinase 3 292 2.1E-65 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu4847 67877ce811ac5181430297e1299247a1 312 SUPERFAMILY SSF53613 3 303 1.17E-79 T 14-10-2018 IPR029056 Ribokinase-like Atu4847 67877ce811ac5181430297e1299247a1 312 Gene3D G3DSA:3.40.1190.20 1 309 5.3E-97 T 14-10-2018 IPR029056 Ribokinase-like Atu0293 deecb2a27dde74222137c3ed3b320d24 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.7E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu0293 deecb2a27dde74222137c3ed3b320d24 230 SUPERFAMILY SSF52833 1 102 8.08E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0293 deecb2a27dde74222137c3ed3b320d24 230 Gene3D G3DSA:3.40.30.10 4 230 4.0E-88 T 14-10-2018 Atu0293 deecb2a27dde74222137c3ed3b320d24 230 Pfam PF14497 Glutathione S-transferase, C-terminal domain 140 215 7.5E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal Atu0293 deecb2a27dde74222137c3ed3b320d24 230 Gene3D G3DSA:1.20.1050.10 83 205 4.0E-88 T 14-10-2018 Atu0293 deecb2a27dde74222137c3ed3b320d24 230 SUPERFAMILY SSF47616 81 227 5.29E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu4682 b886046f8c4faeee6c4f72ff0fd3d27d 413 Pfam PF01266 FAD dependent oxidoreductase 5 395 8.4E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu4682 b886046f8c4faeee6c4f72ff0fd3d27d 413 Gene3D G3DSA:3.30.9.10 136 355 4.5E-39 T 14-10-2018 Atu4682 b886046f8c4faeee6c4f72ff0fd3d27d 413 SUPERFAMILY SSF54373 271 356 1.7E-11 T 14-10-2018 Atu4682 b886046f8c4faeee6c4f72ff0fd3d27d 413 SUPERFAMILY SSF51905 4 413 1.55E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4682 b886046f8c4faeee6c4f72ff0fd3d27d 413 Gene3D G3DSA:3.50.50.60 2 67 1.7E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4682 b886046f8c4faeee6c4f72ff0fd3d27d 413 Gene3D G3DSA:3.50.50.60 117 396 4.5E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6045 07b7781415f77a5b398dfafe53f0dc16 439 Pfam PF11800 Replication protein C C-terminal region 194 398 2.4E-73 T 14-10-2018 IPR021760 Replication protein-C C-terminal Atu6045 07b7781415f77a5b398dfafe53f0dc16 439 SUPERFAMILY SSF46785 90 126 6.97E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6045 07b7781415f77a5b398dfafe53f0dc16 439 Pfam PF03428 Replication protein C N-terminal domain 13 186 2.8E-72 T 14-10-2018 IPR005090 Replication protein C Atu2227 18ac21cd52b0416e230c22c265130f3c 202 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 187 7.6E-28 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain Atu2227 18ac21cd52b0416e230c22c265130f3c 202 Pfam PF01386 Ribosomal L25p family 8 95 2.3E-25 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atu2227 18ac21cd52b0416e230c22c265130f3c 202 Gene3D G3DSA:2.170.120.20 101 188 5.0E-25 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal Atu2227 18ac21cd52b0416e230c22c265130f3c 202 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 185 2.1E-46 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atu2227 18ac21cd52b0416e230c22c265130f3c 202 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 98 9.0E-48 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atu2227 18ac21cd52b0416e230c22c265130f3c 202 Gene3D G3DSA:2.40.240.10 3 98 3.0E-31 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atu2227 18ac21cd52b0416e230c22c265130f3c 202 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 186 29.272 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Atu2227 18ac21cd52b0416e230c22c265130f3c 202 SUPERFAMILY SSF50715 5 194 2.44E-60 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 SUPERFAMILY SSF54593 3 292 4.19E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 37 4.2E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 266 2.1E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 Gene3D G3DSA:3.10.180.10 6 299 9.5E-83 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 SUPERFAMILY SSF53474 315 516 7.4E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 Gene3D G3DSA:3.40.50.1820 308 517 2.2E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1045 44e5af61db98d8b2c8497aef6e06a6aa 519 Gene3D G3DSA:3.10.180.10 66 210 9.5E-83 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3402 8f0b790ce2601021ff44a5f364841c41 347 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 346 1.3E-182 T 14-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 Atu3402 8f0b790ce2601021ff44a5f364841c41 347 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Atu3402 8f0b790ce2601021ff44a5f364841c41 347 SMART SM01329 5 342 2.2E-155 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atu3402 8f0b790ce2601021ff44a5f364841c41 347 SUPERFAMILY SSF53659 2 338 5.95E-107 T 14-10-2018 Atu3402 8f0b790ce2601021ff44a5f364841c41 347 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 327 1.1E-85 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atu3402 8f0b790ce2601021ff44a5f364841c41 347 Gene3D G3DSA:3.40.718.10 1 347 4.2E-125 T 14-10-2018 Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 Pfam PF00677 Lumazine binding domain 104 188 1.3E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 Pfam PF00677 Lumazine binding domain 3 91 1.4E-18 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 Gene3D G3DSA:2.40.30.20 1 93 3.0E-22 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 SUPERFAMILY SSF63380 1 97 3.57E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 3.2E-50 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 SUPERFAMILY SSF63380 97 199 1.45E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 Gene3D G3DSA:2.40.30.20 106 202 1.1E-33 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu1169 0901720b8fe4944ee7635cb2dd0cc1b8 203 PIRSF PIRSF000498 1 203 2.4E-71 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1517 75e9128c05602f20c9bbe04b191bc06f 176 Gene3D G3DSA:2.160.10.10 1 174 4.3E-67 T 14-10-2018 Atu1517 75e9128c05602f20c9bbe04b191bc06f 176 SUPERFAMILY SSF51161 16 169 1.05E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu1517 75e9128c05602f20c9bbe04b191bc06f 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 124 5.5E-10 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1517 75e9128c05602f20c9bbe04b191bc06f 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 20 47 0.0026 T 14-10-2018 IPR001451 Hexapeptide repeat Atu0156 6c143f26464dea769f34a4b5e3641832 236 Pfam PF06912 Protein of unknown function (DUF1275) 22 212 4.0E-28 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 Atu1132 f2138bdcf40cdd69b635a6930f4d5bf6 198 SUPERFAMILY SSF47616 69 186 6.45E-10 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu1132 f2138bdcf40cdd69b635a6930f4d5bf6 198 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 76 9.3E-17 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu1132 f2138bdcf40cdd69b635a6930f4d5bf6 198 SUPERFAMILY SSF52833 1 82 6.35E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1132 f2138bdcf40cdd69b635a6930f4d5bf6 198 Gene3D G3DSA:3.40.30.10 1 80 1.1E-18 T 14-10-2018 Atu1132 f2138bdcf40cdd69b635a6930f4d5bf6 198 Gene3D G3DSA:1.20.1050.10 81 187 5.5E-32 T 14-10-2018 Atu6167 c2041c4657fbcc8699e4de5974f2fd94 245 SUPERFAMILY SSF53955 29 179 9.29E-20 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu6167 c2041c4657fbcc8699e4de5974f2fd94 245 Pfam PF01464 Transglycosylase SLT domain 31 174 3.2E-36 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu6167 c2041c4657fbcc8699e4de5974f2fd94 245 Gene3D G3DSA:1.10.530.10 28 177 1.0E-11 T 14-10-2018 Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 250 4.8E-78 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 251 6.2E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 SMART SM00062 28 253 5.3E-71 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 SMART SM00079 28 252 8.1E-6 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 Gene3D G3DSA:3.40.190.10 31 250 2.3E-76 T 14-10-2018 Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 SUPERFAMILY SSF53850 7 254 4.41E-76 T 14-10-2018 Atu1879 c913581433c33f7d3e9786f6a9cfe855 257 Gene3D G3DSA:3.40.190.10 114 209 2.3E-76 T 14-10-2018 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 SMART SM00411 1 91 5.5E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 Gene3D G3DSA:4.10.520.10 1 93 6.9E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 SUPERFAMILY SSF47729 3 91 3.97E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.1E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.917 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Atu0338 c991ca37fc43cd2625d3ea8830c9ff52 100 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 2 92 9.2E-41 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Atu4551 9fb97007b0325977dd737d07489a1888 313 Gene3D G3DSA:3.40.50.2300 128 306 3.1E-80 T 14-10-2018 Atu4551 9fb97007b0325977dd737d07489a1888 313 Gene3D G3DSA:3.40.50.2300 23 299 3.1E-80 T 14-10-2018 Atu4551 9fb97007b0325977dd737d07489a1888 313 Pfam PF13407 Periplasmic binding protein domain 23 288 8.9E-53 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4551 9fb97007b0325977dd737d07489a1888 313 SUPERFAMILY SSF53822 22 310 5.74E-77 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 Gene3D G3DSA:2.40.50.100 257 336 2.4E-7 T 14-10-2018 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 Gene3D G3DSA:2.40.50.940 223 247 1.4E-10 T 14-10-2018 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 Pfam PF08402 TOBE domain 260 331 4.3E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 SUPERFAMILY SSF50331 237 339 6.52E-15 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 Pfam PF00005 ABC transporter 20 162 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 Gene3D G3DSA:3.40.50.300 3 222 1.2E-67 T 14-10-2018 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 Gene3D G3DSA:2.40.50.140 262 324 2.4E-7 T 14-10-2018 Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 SUPERFAMILY SSF52540 4 243 6.33E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5062 f7a30c90b8bf31836e2592bc8e2f55ce 347 SMART SM00382 29 212 5.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3757 ac0dde4335c1fcb90b50d5c3a7c552b0 206 SMART SM00028 120 153 27.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3757 ac0dde4335c1fcb90b50d5c3a7c552b0 206 SMART SM00028 86 119 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3757 ac0dde4335c1fcb90b50d5c3a7c552b0 206 SMART SM00028 154 187 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3757 ac0dde4335c1fcb90b50d5c3a7c552b0 206 Gene3D G3DSA:1.25.40.10 85 203 2.6E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3757 ac0dde4335c1fcb90b50d5c3a7c552b0 206 SUPERFAMILY SSF48452 85 192 1.25E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 SUPERFAMILY SSF48300 4 61 2.88E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 Gene3D G3DSA:3.30.1390.10 55 125 6.2E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 Gene3D G3DSA:1.20.5.710 3 54 1.5E-19 T 14-10-2018 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 4.5E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 4.7E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 94 7.0E-12 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 2.8E-19 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 24.883 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1957 61b503ba9fdb0ff9636941a60a02ada6 125 SUPERFAMILY SSF54736 54 125 8.2E-25 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 6.3E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 39 58 6.3E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 445 467 6.3E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 285 307 6.3E-13 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Atu1281 d28cf3620340b25451b717e1378699f6 665 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 660 2.2E-273 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1281 d28cf3620340b25451b717e1378699f6 665 Pfam PF00361 Proton-conducting membrane transporter 135 444 6.9E-92 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 335 347 4.4E-56 T 14-10-2018 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 4.4E-56 T 14-10-2018 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 4.4E-56 T 14-10-2018 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 446 465 4.4E-56 T 14-10-2018 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 245 266 4.4E-56 T 14-10-2018 Atu1281 d28cf3620340b25451b717e1378699f6 665 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 267 293 4.4E-56 T 14-10-2018 Atu1281 d28cf3620340b25451b717e1378699f6 665 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 534 655 2.3E-7 T 14-10-2018 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1281 d28cf3620340b25451b717e1378699f6 665 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 123 1.9E-26 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 PIRSF PIRSF000538 2 497 2.0E-164 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 SUPERFAMILY SSF53067 4 253 2.16E-93 T 14-10-2018 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 Gene3D G3DSA:3.30.420.40 252 496 7.6E-83 T 14-10-2018 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 SUPERFAMILY SSF53067 253 495 8.47E-74 T 14-10-2018 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 493 1.6E-202 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.5E-74 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 Hamap MF_00186 Glycerol kinase [glpK]. 2 497 53.13 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 9.0E-52 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atu3890 a2df81130ad6ab49c1538d1ee1372d31 499 Gene3D G3DSA:3.30.420.40 3 251 2.9E-104 T 14-10-2018 Atu1589 3ce48964c16ca7d59ee43e9ea52dbe11 406 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Atu1589 3ce48964c16ca7d59ee43e9ea52dbe11 406 Gene3D G3DSA:3.40.640.10 63 288 2.4E-116 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1589 3ce48964c16ca7d59ee43e9ea52dbe11 406 Pfam PF00155 Aminotransferase class I and II 31 382 3.0E-51 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu1589 3ce48964c16ca7d59ee43e9ea52dbe11 406 SUPERFAMILY SSF53383 4 390 6.61E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1589 3ce48964c16ca7d59ee43e9ea52dbe11 406 Gene3D G3DSA:3.90.1150.10 289 386 2.4E-116 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3390 aea7d9a462345c8ac058dcb7d5c50342 379 Gene3D G3DSA:3.40.50.1980 24 373 2.8E-96 T 14-10-2018 Atu3390 aea7d9a462345c8ac058dcb7d5c50342 379 Pfam PF01497 Periplasmic binding protein 87 316 1.4E-14 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu3390 aea7d9a462345c8ac058dcb7d5c50342 379 SUPERFAMILY SSF53807 27 366 1.06E-45 T 14-10-2018 Atu3563 290828117875ecafb43c431ccdd490f7 160 PIRSF PIRSF006092 6 160 3.4E-20 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Atu3563 290828117875ecafb43c431ccdd490f7 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 159 1.2E-17 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Atu3563 290828117875ecafb43c431ccdd490f7 160 Gene3D G3DSA:3.10.50.30 88 160 1.6E-19 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Atu3563 290828117875ecafb43c431ccdd490f7 160 SUPERFAMILY SSF54534 90 157 2.49E-15 T 14-10-2018 Atu0194 1b652cd072f0a8f4cd2ce0e69148f8a9 442 Gene3D G3DSA:3.50.50.60 46 398 8.5E-70 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0194 1b652cd072f0a8f4cd2ce0e69148f8a9 442 SUPERFAMILY SSF51905 45 425 1.2E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0194 1b652cd072f0a8f4cd2ce0e69148f8a9 442 Pfam PF01266 FAD dependent oxidoreductase 46 395 5.2E-50 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu0194 1b652cd072f0a8f4cd2ce0e69148f8a9 442 Gene3D G3DSA:3.30.9.10 139 359 8.5E-70 T 14-10-2018 Atu4123 a9ebcf64f560d4e7d139642e68b54a83 402 SUPERFAMILY SSF53822 29 400 4.71E-90 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4123 a9ebcf64f560d4e7d139642e68b54a83 402 Pfam PF13458 Periplasmic binding protein 28 365 5.3E-85 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu4123 a9ebcf64f560d4e7d139642e68b54a83 402 Gene3D G3DSA:3.40.50.2300 148 366 8.4E-112 T 14-10-2018 Atu4123 a9ebcf64f560d4e7d139642e68b54a83 402 Gene3D G3DSA:3.40.50.2300 52 358 8.4E-112 T 14-10-2018 Atu0399 1da84b36269caee4a8c4e7912948b733 345 Hamap MF_00219 Dihydroorotase [pyrC]. 2 345 45.679 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu0399 1da84b36269caee4a8c4e7912948b733 345 PIRSF PIRSF001237 1 345 9.6E-137 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu0399 1da84b36269caee4a8c4e7912948b733 345 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 332 4.8E-129 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu0399 1da84b36269caee4a8c4e7912948b733 345 Gene3D G3DSA:3.20.20.140 2 345 1.1E-97 T 14-10-2018 Atu0399 1da84b36269caee4a8c4e7912948b733 345 Pfam PF01979 Amidohydrolase family 11 310 6.3E-21 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu0399 1da84b36269caee4a8c4e7912948b733 345 SUPERFAMILY SSF51556 1 344 6.81E-140 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu0399 1da84b36269caee4a8c4e7912948b733 345 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu0399 1da84b36269caee4a8c4e7912948b733 345 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu4532 24fffa5e32b751d4255fbca5e7e8ce23 289 SUPERFAMILY SSF53223 4 110 1.09E-27 T 14-10-2018 Atu4532 24fffa5e32b751d4255fbca5e7e8ce23 289 Gene3D G3DSA:3.40.50.720 109 249 1.1E-79 T 14-10-2018 Atu4532 24fffa5e32b751d4255fbca5e7e8ce23 289 Gene3D G3DSA:3.40.50.10860 11 271 1.1E-79 T 14-10-2018 Atu4532 24fffa5e32b751d4255fbca5e7e8ce23 289 SUPERFAMILY SSF51735 111 280 5.04E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4532 24fffa5e32b751d4255fbca5e7e8ce23 289 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 98 2.1E-25 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu4532 24fffa5e32b751d4255fbca5e7e8ce23 289 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 281 26.472 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Atu3194 416e8644bafaa411a4970f293915b948 189 SUPERFAMILY SSF55729 21 144 4.01E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3194 416e8644bafaa411a4970f293915b948 189 Pfam PF00583 Acetyltransferase (GNAT) family 54 144 5.1E-10 T 14-10-2018 IPR000182 GNAT domain Atu3194 416e8644bafaa411a4970f293915b948 189 Gene3D G3DSA:3.40.630.30 9 185 2.1E-34 T 14-10-2018 Atu1558 3c373f618102f68452b2db8baf7e3a90 298 SUPERFAMILY SSF103481 35 136 2.35E-13 T 14-10-2018 Atu1558 3c373f618102f68452b2db8baf7e3a90 298 SUPERFAMILY SSF103481 204 287 7.19E-11 T 14-10-2018 Atu1558 3c373f618102f68452b2db8baf7e3a90 298 Pfam PF00892 EamA-like transporter family 24 133 2.6E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1558 3c373f618102f68452b2db8baf7e3a90 298 Pfam PF00892 EamA-like transporter family 144 282 1.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2193 d9fa8298be365bd94cce0fa76499435e 88 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 67 1.1E-8 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 Atu3593 c119f32683b95b38e248129ce2cd3074 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 147 2.0E-73 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Atu3593 c119f32683b95b38e248129ce2cd3074 192 SUPERFAMILY SSF89028 6 187 3.34E-62 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Atu3593 c119f32683b95b38e248129ce2cd3074 192 Pfam PF01923 Cobalamin adenosyltransferase 7 175 1.8E-61 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Atu3593 c119f32683b95b38e248129ce2cd3074 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 186 2.3E-59 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Atu3593 c119f32683b95b38e248129ce2cd3074 192 Gene3D G3DSA:1.20.1200.10 28 192 1.1E-57 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Atu5128 4529c1f70e4363fb92f5025707259a4f 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 281 7.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5128 4529c1f70e4363fb92f5025707259a4f 285 SUPERFAMILY SSF161098 27 283 1.31E-52 T 14-10-2018 IPR035906 MetI-like superfamily Atu5128 4529c1f70e4363fb92f5025707259a4f 285 Gene3D G3DSA:1.10.3720.10 28 285 8.0E-48 T 14-10-2018 IPR035906 MetI-like superfamily Atu1773 6aba15e9d314af82b1982c9110e15562 218 Pfam PF06776 Invasion associated locus B (IalB) protein 49 176 1.2E-35 T 14-10-2018 IPR010642 Invasion protein B Atu1773 6aba15e9d314af82b1982c9110e15562 218 Gene3D G3DSA:2.60.40.1880 48 188 1.4E-20 T 14-10-2018 IPR038696 Invasion protein B superfamily Atu5061 583a189b9911bbb2d1e7a1989d1e8f6f 249 Gene3D G3DSA:3.20.20.190 1 249 1.8E-86 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu5061 583a189b9911bbb2d1e7a1989d1e8f6f 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 234 3.3E-18 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Atu5061 583a189b9911bbb2d1e7a1989d1e8f6f 249 SUPERFAMILY SSF51695 2 243 6.28E-44 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu0450 fa6e64c1c7043b37af1b785295cc6d35 188 SMART SM00738 12 113 7.1E-24 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu0450 fa6e64c1c7043b37af1b785295cc6d35 188 SUPERFAMILY SSF82679 13 115 2.62E-19 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu0450 fa6e64c1c7043b37af1b785295cc6d35 188 Gene3D G3DSA:3.30.70.940 5 111 2.5E-15 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu0450 fa6e64c1c7043b37af1b785295cc6d35 188 Pfam PF02357 Transcription termination factor nusG 14 109 1.1E-16 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu0450 fa6e64c1c7043b37af1b785295cc6d35 188 Gene3D G3DSA:2.30.30.30 125 187 3.0E-7 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atu4452 01f3d074ae86212e07c581cb56be5624 239 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 55 185 1.5E-19 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu4452 01f3d074ae86212e07c581cb56be5624 239 Gene3D G3DSA:1.10.150.240 21 87 6.6E-60 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu4452 01f3d074ae86212e07c581cb56be5624 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 81 181 5.7E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu4452 01f3d074ae86212e07c581cb56be5624 239 SUPERFAMILY SSF56784 8 221 8.56E-54 T 14-10-2018 IPR036412 HAD-like superfamily Atu4452 01f3d074ae86212e07c581cb56be5624 239 Gene3D G3DSA:3.40.50.1000 9 207 6.6E-60 T 14-10-2018 IPR023214 HAD superfamily Atu4452 01f3d074ae86212e07c581cb56be5624 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 5.4E-28 T 14-10-2018 Atu4370 e5255c6a798686d541a783d742a9f7e8 497 SMART SM00382 280 473 0.0054 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4370 e5255c6a798686d541a783d742a9f7e8 497 SMART SM00382 29 221 3.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4370 e5255c6a798686d541a783d742a9f7e8 497 SUPERFAMILY SSF52540 4 228 4.18E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4370 e5255c6a798686d541a783d742a9f7e8 497 Pfam PF00005 ABC transporter 272 424 2.6E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4370 e5255c6a798686d541a783d742a9f7e8 497 SUPERFAMILY SSF52540 271 483 3.1E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4370 e5255c6a798686d541a783d742a9f7e8 497 Pfam PF00005 ABC transporter 24 173 1.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4370 e5255c6a798686d541a783d742a9f7e8 497 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4370 e5255c6a798686d541a783d742a9f7e8 497 Gene3D G3DSA:3.40.50.300 2 241 2.4E-50 T 14-10-2018 Atu4370 e5255c6a798686d541a783d742a9f7e8 497 Gene3D G3DSA:3.40.50.300 250 493 1.4E-38 T 14-10-2018 Atu3199 6e7d0f4daa830b12df289181e2c2425b 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 324 2.0E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 4.2E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 Pfam PF01872 RibD C-terminal domain 151 247 5.5E-20 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 Pfam PF01872 RibD C-terminal domain 329 391 2.6E-11 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 PIRSF PIRSF006769 2 258 2.3E-93 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 PIRSF PIRSF006769 307 408 2.2E-13 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 246 6.3E-79 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 Gene3D G3DSA:3.40.140.10 2 138 1.8E-40 T 14-10-2018 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 SUPERFAMILY SSF53927 7 146 3.76E-42 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Atu8148 4dcf1b3273669a5f73561c49fb71268e 414 SUPERFAMILY SSF53597 150 404 2.55E-28 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 SUPERFAMILY SSF50037 212 255 9.61E-7 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 Pfam PF02237 Biotin protein ligase C terminal domain 210 256 3.0E-13 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 SUPERFAMILY SSF55681 15 205 2.61E-46 T 14-10-2018 Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 20 253 1.8E-44 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 Gene3D G3DSA:2.30.30.100 210 255 1.5E-8 T 14-10-2018 Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 Pfam PF03099 Biotin/lipoate A/B protein ligase family 45 148 2.3E-9 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Atu1284 8e7e2b25cd4e81b609a11b221d4e3001 256 Gene3D G3DSA:3.30.930.10 3 208 2.0E-49 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:3.30.565.10 724 878 8.4E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:3.30.450.20 373 497 1.3E-27 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Pfam PF00512 His Kinase A (phospho-acceptor) domain 655 721 4.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00091 512 585 3.3E-4 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00091 24 96 0.34 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00091 383 452 0.0017 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 508 640 1.5E-13 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 298 378 1.4E-9 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 379 507 5.0E-16 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 141 3.1E-10 T 14-10-2018 IPR000014 PAS domain Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:1.10.287.130 660 722 1.1E-17 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00086 591 633 2.2E-4 T 14-10-2018 IPR001610 PAC motif Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00086 458 500 2.5E-6 T 14-10-2018 IPR001610 PAC motif Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00086 329 371 5.0E-7 T 14-10-2018 IPR001610 PAC motif Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00086 102 144 1.2E-4 T 14-10-2018 IPR001610 PAC motif Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:3.30.450.20 25 140 5.0E-24 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:3.30.450.20 153 221 3.2E-5 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:3.30.450.20 242 367 2.1E-21 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Gene3D G3DSA:3.30.450.20 504 629 3.3E-24 T 14-10-2018 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 768 873 7.2E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SUPERFAMILY SSF55785 298 368 7.68E-18 T 14-10-2018 IPR035965 PAS domain superfamily Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SUPERFAMILY SSF55785 371 497 2.44E-24 T 14-10-2018 IPR035965 PAS domain superfamily Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SUPERFAMILY SSF55874 731 872 7.07E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SUPERFAMILY SSF47384 648 724 2.94E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SUPERFAMILY SSF55785 37 141 2.44E-22 T 14-10-2018 IPR035965 PAS domain superfamily Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00387 767 874 1.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Pfam PF08447 PAS fold 406 493 2.7E-18 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Pfam PF08447 PAS fold 298 365 2.4E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Pfam PF08447 PAS fold 47 138 1.0E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 Pfam PF08447 PAS fold 535 626 2.9E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 807 821 2.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 871 2.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 823 833 2.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 852 2.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SUPERFAMILY SSF55785 497 630 7.89E-22 T 14-10-2018 IPR035965 PAS domain superfamily Atu4305 f7ce0b28367bdf6c5fe12620bbdd960f 880 SMART SM00388 655 725 7.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0822 1e31f4aa92d9e646176c1370547de820 290 Gene3D G3DSA:1.10.3720.10 25 280 3.0E-61 T 14-10-2018 IPR035906 MetI-like superfamily Atu0822 1e31f4aa92d9e646176c1370547de820 290 SUPERFAMILY SSF161098 32 272 1.23E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu0822 1e31f4aa92d9e646176c1370547de820 290 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 24 280 2.2E-123 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 Atu0822 1e31f4aa92d9e646176c1370547de820 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 280 2.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0822 1e31f4aa92d9e646176c1370547de820 290 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 27 280 1.2E-96 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 Gene3D G3DSA:3.20.20.80 8 412 3.5E-126 T 14-10-2018 Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 3 474 6.3E-132 T 14-10-2018 IPR022527 Sucrose phosphorylase GO:0004645|GO:0044262 Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 Gene3D G3DSA:3.90.400.10 88 171 3.5E-126 T 14-10-2018 Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 Pfam PF00128 Alpha amylase, catalytic domain 37 219 2.4E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 SMART SM00642 8 429 4.2E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 PIRSF PIRSF003059 1 482 4.5E-165 T 14-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related Atu6135 43fc91bec04317b422ef2cc7c6078ec0 485 SUPERFAMILY SSF51445 1 432 2.22E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 SUPERFAMILY SSF51905 366 678 7.77E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 Pfam PF13450 NAD(P)-binding Rossmann-like domain 390 425 2.8E-8 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 412 1.4E-6 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 471 485 1.4E-6 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 Gene3D G3DSA:3.40.50.720 387 671 1.1E-61 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 340 8.1E-50 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 Gene3D G3DSA:3.50.50.60 482 608 1.1E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 488 2.8E-7 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 600 616 2.8E-7 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 388 407 2.8E-7 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 637 659 2.8E-7 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 SUPERFAMILY SSF51395 1 371 5.92E-91 T 14-10-2018 Atu2538 8264d7901b2b8853fad0a640adb63c1e 678 Gene3D G3DSA:3.20.20.70 4 377 1.6E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3719 183a19b4bda5ee1a79a8d52af0f75343 175 PRINTS PR00502 NUDIX hydrolase family signature 61 76 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu3719 183a19b4bda5ee1a79a8d52af0f75343 175 PRINTS PR00502 NUDIX hydrolase family signature 47 61 1.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu3719 183a19b4bda5ee1a79a8d52af0f75343 175 Pfam PF00293 NUDIX domain 27 136 4.3E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu3719 183a19b4bda5ee1a79a8d52af0f75343 175 SUPERFAMILY SSF55811 14 136 1.08E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu3719 183a19b4bda5ee1a79a8d52af0f75343 175 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu3719 183a19b4bda5ee1a79a8d52af0f75343 175 Gene3D G3DSA:3.90.79.10 5 169 4.0E-34 T 14-10-2018 Atu0742 2cf703c8cfb0132dbc93e9d19181e627 123 SUPERFAMILY SSF54427 2 120 4.97E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu0742 2cf703c8cfb0132dbc93e9d19181e627 123 Pfam PF12680 SnoaL-like domain 9 108 4.5E-12 T 14-10-2018 IPR037401 SnoaL-like domain Atu0742 2cf703c8cfb0132dbc93e9d19181e627 123 PIRSF PIRSF030561 1 113 3.0E-49 T 14-10-2018 IPR008317 Uncharacterised conserved protein UCP030561 Atu0742 2cf703c8cfb0132dbc93e9d19181e627 123 Gene3D G3DSA:3.10.450.50 1 123 1.0E-46 T 14-10-2018 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 Pfam PF08402 TOBE domain 256 325 3.2E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 SUPERFAMILY SSF52540 4 242 3.78E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 Pfam PF00005 ABC transporter 22 161 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 SMART SM00382 28 211 2.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 Gene3D G3DSA:2.40.50.940 251 326 3.1E-11 T 14-10-2018 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 SUPERFAMILY SSF50331 236 329 1.34E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 Gene3D G3DSA:3.40.50.300 3 221 9.9E-63 T 14-10-2018 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 Gene3D G3DSA:2.40.50.140 262 317 3.1E-11 T 14-10-2018 Atu3170 ca4700dc5ff98c34b630082f9ca59c98 332 Gene3D G3DSA:2.40.50.940 222 250 1.9E-11 T 14-10-2018 Atu0693 71555caeafdd2d2cd9adccb58b6e1f17 448 SUPERFAMILY SSF111283 10 448 1.31E-115 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Atu0693 71555caeafdd2d2cd9adccb58b6e1f17 448 Gene3D G3DSA:3.30.2290.10 3 225 1.5E-66 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Atu0693 71555caeafdd2d2cd9adccb58b6e1f17 448 Pfam PF01523 Putative modulator of DNA gyrase 28 317 1.5E-55 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Atu2153 95bcff3db4d534dbfccd1e04062e0363 258 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 161 217 3.1E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu2153 95bcff3db4d534dbfccd1e04062e0363 258 Gene3D G3DSA:3.40.50.300 25 92 2.8E-5 T 14-10-2018 Atu2153 95bcff3db4d534dbfccd1e04062e0363 258 Pfam PF13476 AAA domain 30 134 7.3E-9 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Atu2153 95bcff3db4d534dbfccd1e04062e0363 258 SMART SM00382 35 237 3.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2153 95bcff3db4d534dbfccd1e04062e0363 258 Gene3D G3DSA:3.40.50.300 93 234 7.0E-9 T 14-10-2018 Atu2153 95bcff3db4d534dbfccd1e04062e0363 258 SUPERFAMILY SSF52540 32 234 9.21E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3043 e81cac519f8a3764b364acc488ff4a16 512 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 172 2.4E-39 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu3043 e81cac519f8a3764b364acc488ff4a16 512 Gene3D G3DSA:3.30.420.40 1 89 3.9E-6 T 14-10-2018 Atu3043 e81cac519f8a3764b364acc488ff4a16 512 Pfam PF01968 Hydantoinase/oxoprolinase 192 362 2.6E-25 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu3043 e81cac519f8a3764b364acc488ff4a16 512 SUPERFAMILY SSF53067 268 442 1.06E-20 T 14-10-2018 Atu3043 e81cac519f8a3764b364acc488ff4a16 512 SUPERFAMILY SSF53067 2 74 4.04E-8 T 14-10-2018 Atu2782 c8e354a241604662235680b3b7ffb918 196 SUPERFAMILY SSF55729 20 169 2.66E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2782 c8e354a241604662235680b3b7ffb918 196 Pfam PF13302 Acetyltransferase (GNAT) domain 28 163 1.7E-27 T 14-10-2018 IPR000182 GNAT domain Atu2782 c8e354a241604662235680b3b7ffb918 196 Gene3D G3DSA:3.40.630.30 5 179 1.3E-35 T 14-10-2018 Atu0020 2b95edca9bfa96494ea1150475214d24 298 SUPERFAMILY SSF52096 26 283 1.13E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu0020 2b95edca9bfa96494ea1150475214d24 298 Gene3D G3DSA:3.90.226.10 26 287 1.1E-74 T 14-10-2018 Atu0020 2b95edca9bfa96494ea1150475214d24 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 1.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu0020 2b95edca9bfa96494ea1150475214d24 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 1.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu0020 2b95edca9bfa96494ea1150475214d24 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 1.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu0020 2b95edca9bfa96494ea1150475214d24 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 1.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu0020 2b95edca9bfa96494ea1150475214d24 298 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 1.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu0020 2b95edca9bfa96494ea1150475214d24 298 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 5 282 35.713 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu0020 2b95edca9bfa96494ea1150475214d24 298 Pfam PF01039 Carboxyl transferase domain 103 243 7.6E-18 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Atu0020 2b95edca9bfa96494ea1150475214d24 298 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 13 284 6.0E-104 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu4867 19fc5f9e8de61a59d3e28b0c45613e04 178 Pfam PF12680 SnoaL-like domain 51 155 4.7E-11 T 14-10-2018 IPR037401 SnoaL-like domain Atu4867 19fc5f9e8de61a59d3e28b0c45613e04 178 Gene3D G3DSA:3.10.450.50 42 168 5.6E-27 T 14-10-2018 Atu4867 19fc5f9e8de61a59d3e28b0c45613e04 178 SUPERFAMILY SSF54427 43 169 1.99E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu1537 bad4ca5c2762b9d24aa8c3e34d7309d9 540 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 263 318 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1537 bad4ca5c2762b9d24aa8c3e34d7309d9 540 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 72 503 6.7E-117 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1537 bad4ca5c2762b9d24aa8c3e34d7309d9 540 SUPERFAMILY SSF81442 71 527 2.88E-122 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1537 bad4ca5c2762b9d24aa8c3e34d7309d9 540 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 68 527 1.2E-241 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Atu1537 bad4ca5c2762b9d24aa8c3e34d7309d9 540 Gene3D G3DSA:1.20.210.10 61 532 5.4E-194 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1752 d312227ac769a80b36d4027f4e700078 144 Gene3D G3DSA:3.10.580.10 1 144 5.5E-58 T 14-10-2018 Atu1752 d312227ac769a80b36d4027f4e700078 144 SMART SM00116 81 128 1.2E-5 T 14-10-2018 IPR000644 CBS domain Atu1752 d312227ac769a80b36d4027f4e700078 144 SMART SM00116 15 63 7.9E-10 T 14-10-2018 IPR000644 CBS domain Atu1752 d312227ac769a80b36d4027f4e700078 144 SUPERFAMILY SSF54631 4 142 1.26E-33 T 14-10-2018 Atu1752 d312227ac769a80b36d4027f4e700078 144 Pfam PF00571 CBS domain 76 127 4.7E-10 T 14-10-2018 IPR000644 CBS domain Atu1752 d312227ac769a80b36d4027f4e700078 144 Pfam PF00571 CBS domain 14 63 2.0E-10 T 14-10-2018 IPR000644 CBS domain Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 91 3.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 SMART SM00895 101 224 1.3E-9 T 14-10-2018 IPR011711 GntR, C-terminal Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 SMART SM00345 33 91 1.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 Gene3D G3DSA:1.20.120.530 94 233 1.4E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 SUPERFAMILY SSF46785 28 95 6.07E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 Pfam PF07729 FCD domain 102 223 4.8E-17 T 14-10-2018 IPR011711 GntR, C-terminal Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 Gene3D G3DSA:1.10.10.10 16 92 7.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5406 4b90ce90a0dca88244d705f5bc3da4a9 249 SUPERFAMILY SSF48008 97 229 1.02E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 PRINTS PR00481 Cytosol aminopeptidase signature 307 327 1.6E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 1.6E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 PRINTS PR00481 Cytosol aminopeptidase signature 335 350 1.6E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 PRINTS PR00481 Cytosol aminopeptidase signature 248 269 1.6E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 PRINTS PR00481 Cytosol aminopeptidase signature 226 243 1.6E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 311 318 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 152 454 2.9E-105 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 SUPERFAMILY SSF52949 34 128 2.59E-5 T 14-10-2018 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 Gene3D G3DSA:3.40.220.10 13 135 4.2E-25 T 14-10-2018 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 SUPERFAMILY SSF53187 147 459 7.22E-105 T 14-10-2018 Atu0214 1d616ae38496baf8174e8f0d4f1a1aec 464 Gene3D G3DSA:3.40.630.10 138 462 1.9E-119 T 14-10-2018 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 SUPERFAMILY SSF56059 83 348 1.56E-71 T 14-10-2018 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Gene3D G3DSA:3.30.700.30 455 587 7.5E-35 T 14-10-2018 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Pfam PF00364 Biotin-requiring enzyme 603 665 2.0E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 SUPERFAMILY SSF52440 1 113 2.52E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 623 640 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Pfam PF02785 Biotin carboxylase C-terminal domain 336 448 4.0E-35 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Gene3D G3DSA:2.40.50.100 592 667 7.2E-19 T 14-10-2018 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Gene3D G3DSA:3.30.470.130 1 453 6.4E-202 T 14-10-2018 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 SMART SM00878 336 448 6.7E-57 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 5.5E-46 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 6.7E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 SUPERFAMILY SSF51230 589 667 4.19E-18 T 14-10-2018 IPR011053 Single hybrid motif Atu3581 318d7859f7eb987d4ab4e4394a6daa53 667 SUPERFAMILY SSF51246 331 451 7.32E-39 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu6103 7b8fa7f5176c6b8c76fb084eb166418e 585 Pfam PF02195 ParB-like nuclease domain 6 96 3.4E-9 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu6103 7b8fa7f5176c6b8c76fb084eb166418e 585 Gene3D G3DSA:3.90.1530.30 19 82 1.0E-8 T 14-10-2018 Atu6103 7b8fa7f5176c6b8c76fb084eb166418e 585 SMART SM00470 4 97 7.6E-20 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu6103 7b8fa7f5176c6b8c76fb084eb166418e 585 Gene3D G3DSA:1.10.10.2830 87 190 1.1E-9 T 14-10-2018 Atu6103 7b8fa7f5176c6b8c76fb084eb166418e 585 SUPERFAMILY SSF110849 4 99 3.66E-13 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu6103 7b8fa7f5176c6b8c76fb084eb166418e 585 SUPERFAMILY SSF109709 92 187 2.22E-13 T 14-10-2018 Atu5097 28e59d213313e26d03259f364b935d61 350 Pfam PF04679 ATP dependent DNA ligase C terminal region 251 339 4.3E-21 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Atu5097 28e59d213313e26d03259f364b935d61 350 Pfam PF01068 ATP dependent DNA ligase domain 55 230 4.2E-30 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Atu5097 28e59d213313e26d03259f364b935d61 350 Gene3D G3DSA:3.30.470.30 67 187 6.1E-48 T 14-10-2018 Atu5097 28e59d213313e26d03259f364b935d61 350 SUPERFAMILY SSF56091 46 230 1.44E-47 T 14-10-2018 Atu5097 28e59d213313e26d03259f364b935d61 350 Gene3D G3DSA:2.40.50.140 233 348 3.0E-27 T 14-10-2018 Atu5097 28e59d213313e26d03259f364b935d61 350 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 44 346 8.6E-97 T 14-10-2018 IPR014146 DNA ligase D, ligase domain Atu5097 28e59d213313e26d03259f364b935d61 350 SUPERFAMILY SSF50249 236 349 2.31E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu5097 28e59d213313e26d03259f364b935d61 350 Gene3D G3DSA:3.30.1490.70 52 228 6.1E-48 T 14-10-2018 Atu1353 ceb797aa9733e79ca2714b5bec4dc638 121 Gene3D G3DSA:3.30.1130.10 3 121 7.6E-35 T 14-10-2018 Atu1353 ceb797aa9733e79ca2714b5bec4dc638 121 SMART SM00905 6 119 5.7E-40 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atu1353 ceb797aa9733e79ca2714b5bec4dc638 121 SUPERFAMILY SSF55620 4 118 3.34E-33 T 14-10-2018 Atu1353 ceb797aa9733e79ca2714b5bec4dc638 121 Pfam PF02152 Dihydroneopterin aldolase 6 117 6.7E-27 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atu1353 ceb797aa9733e79ca2714b5bec4dc638 121 TIGRFAM TIGR00526 folB_dom: FolB domain 5 119 8.0E-23 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atu1353 ceb797aa9733e79ca2714b5bec4dc638 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 5 118 8.5E-36 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 2.8E-36 T 14-10-2018 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 222 243 2.8E-36 T 14-10-2018 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 270 2.8E-36 T 14-10-2018 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.8E-36 T 14-10-2018 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 2.8E-36 T 14-10-2018 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 Pfam PF13244 Domain of unknown function (DUF4040) 614 676 2.9E-16 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 Pfam PF00361 Proton-conducting membrane transporter 132 415 2.1E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0909 83416fd572c560da7a01f1f7f5bec3eb 789 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 68 119 8.8E-14 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 Gene3D G3DSA:3.40.47.10 13 271 6.5E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 SMART SM00825 Beta-ketoacyl synthase 13 426 4.9E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 13 259 2.4E-30 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 SUPERFAMILY SSF53901 13 266 4.37E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 167 183 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 SUPERFAMILY SSF53901 227 424 1.92E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 Gene3D G3DSA:3.40.47.10 272 426 4.8E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1596 8d3395d3bfd5df37b06c5fac46d25010 426 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 268 381 1.2E-30 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atu1947 8300fb20942118dd092157c5fc55cb75 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.1E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1947 8300fb20942118dd092157c5fc55cb75 102 SUPERFAMILY SSF54999 6 102 3.14E-40 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Atu1947 8300fb20942118dd092157c5fc55cb75 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.5E-37 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Atu1947 8300fb20942118dd092157c5fc55cb75 102 SMART SM01403 7 101 7.3E-60 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Atu1947 8300fb20942118dd092157c5fc55cb75 102 Gene3D G3DSA:3.30.70.600 1 102 1.4E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Atu1947 8300fb20942118dd092157c5fc55cb75 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.8E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1947 8300fb20942118dd092157c5fc55cb75 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.8E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1947 8300fb20942118dd092157c5fc55cb75 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.8E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1947 8300fb20942118dd092157c5fc55cb75 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.788 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1947 8300fb20942118dd092157c5fc55cb75 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Pfam PF08448 PAS fold 177 285 2.4E-20 T 14-10-2018 IPR013656 PAS fold-4 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Pfam PF00072 Response regulator receiver domain 874 979 2.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Pfam PF00072 Response regulator receiver domain 721 832 1.8E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Pfam PF08447 PAS fold 322 403 3.2E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 535 5.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SUPERFAMILY SSF52172 871 983 2.28E-24 T 14-10-2018 IPR011006 CheY-like superfamily Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:3.40.50.2300 718 844 5.4E-23 T 14-10-2018 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00091 170 236 0.0022 T 14-10-2018 IPR000014 PAS domain Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00091 295 361 0.0091 T 14-10-2018 IPR000014 PAS domain Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00387 577 700 4.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SUPERFAMILY SSF55874 526 700 1.31E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SUPERFAMILY SSF47384 461 534 1.2E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 698 1.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 293 414 6.6E-14 T 14-10-2018 IPR000014 PAS domain Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 172 290 7.6E-14 T 14-10-2018 IPR000014 PAS domain Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:1.10.287.130 462 535 5.7E-19 T 14-10-2018 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:3.30.450.20 293 407 7.9E-27 T 14-10-2018 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00086 115 158 440.0 T 14-10-2018 IPR001610 PAC motif Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00086 367 409 1.8E-7 T 14-10-2018 IPR001610 PAC motif Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00086 241 283 0.11 T 14-10-2018 IPR001610 PAC motif Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SUPERFAMILY SSF52172 720 843 1.42E-23 T 14-10-2018 IPR011006 CheY-like superfamily Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SUPERFAMILY SSF55785 156 280 9.27E-22 T 14-10-2018 IPR035965 PAS domain superfamily Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 657 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 643 1.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00388 470 536 1.2E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:3.30.450.20 170 292 1.1E-23 T 14-10-2018 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00448 719 832 8.9E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SMART SM00448 872 979 7.8E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:3.40.50.2300 869 990 4.1E-25 T 14-10-2018 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:3.30.450.20 41 169 1.5E-14 T 14-10-2018 Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 SUPERFAMILY SSF55785 280 407 4.19E-25 T 14-10-2018 IPR035965 PAS domain superfamily Atu4047 ffb678c4c593b5ae3057f394c36129b8 991 Gene3D G3DSA:3.30.565.10 538 707 1.3E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu3842 4cb8b743ba9dc593d6c976bb30ff4c63 196 SUPERFAMILY SSF55486 107 178 1.16E-6 T 14-10-2018 Atu2090 42615d2f9e43cbbf83a91ac839ca88ba 434 Gene3D G3DSA:1.20.1250.20 24 433 1.2E-58 T 14-10-2018 Atu2090 42615d2f9e43cbbf83a91ac839ca88ba 434 SUPERFAMILY SSF103473 25 431 9.02E-61 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2090 42615d2f9e43cbbf83a91ac839ca88ba 434 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 324 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu2090 42615d2f9e43cbbf83a91ac839ca88ba 434 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 423 8.2E-135 T 14-10-2018 IPR004736 MFS transporter, metabolite:H symporter GO:0016021|GO:0022857|GO:0055085 Atu2090 42615d2f9e43cbbf83a91ac839ca88ba 434 Pfam PF00083 Sugar (and other) transporter 27 236 3.9E-21 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu4068 3954c1fa4e71951747d5eaeb59e9ce30 104 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 87 2.2E-35 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4068 3954c1fa4e71951747d5eaeb59e9ce30 104 Gene3D G3DSA:3.30.2270.10 1 101 2.7E-33 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4068 3954c1fa4e71951747d5eaeb59e9ce30 104 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 85 2.9E-32 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 Gene3D G3DSA:2.40.50.100 67 213 2.1E-66 T 14-10-2018 Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 276 2.0E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 363 1.9E-69 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 SUPERFAMILY SSF111369 59 277 1.02E-21 T 14-10-2018 Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 Gene3D G3DSA:2.40.420.20 289 361 2.1E-66 T 14-10-2018 Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 Gene3D G3DSA:1.10.287.470 101 173 2.1E-66 T 14-10-2018 Atu5382 0b88f97e868b75d5c667a0ce3350ecc6 384 Gene3D G3DSA:2.40.30.170 59 288 2.1E-66 T 14-10-2018 Atu5159 1b233b89fff0e2f66b0b5861d6c2d077 134 Pfam PF10116 Protein required for attachment to host cells 8 131 2.1E-25 T 14-10-2018 IPR019291 Host attachment protein Atu0856 2a786a2135e4e6d24848940419fb4307 254 Gene3D G3DSA:3.40.190.10 121 223 1.6E-52 T 14-10-2018 Atu0856 2a786a2135e4e6d24848940419fb4307 254 Pfam PF03466 LysR substrate binding domain 45 249 1.3E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0856 2a786a2135e4e6d24848940419fb4307 254 SUPERFAMILY SSF53850 46 249 3.08E-39 T 14-10-2018 Atu0856 2a786a2135e4e6d24848940419fb4307 254 Gene3D G3DSA:3.40.190.10 49 248 1.6E-52 T 14-10-2018 Atu0856 2a786a2135e4e6d24848940419fb4307 254 Gene3D G3DSA:1.10.10.10 1 48 7.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 SUPERFAMILY SSF47413 7 64 1.23E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 5.2E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 Gene3D G3DSA:3.40.50.2300 165 295 1.0E-72 T 14-10-2018 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 Gene3D G3DSA:3.40.50.2300 60 311 1.0E-72 T 14-10-2018 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 1.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 1.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 SMART SM00354 6 76 1.3E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 Pfam PF13377 Periplasmic binding protein-like domain 174 336 4.4E-31 T 14-10-2018 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 Gene3D G3DSA:1.10.260.40 1 59 5.5E-21 T 14-10-2018 Atu3062 d3e6289a2a0bee158c0d837b08d96f00 342 SUPERFAMILY SSF53822 66 339 3.62E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu1939 ba572d0bdd163255330148ae9e33b013 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.3E-55 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1939 ba572d0bdd163255330148ae9e33b013 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1939 ba572d0bdd163255330148ae9e33b013 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1939 ba572d0bdd163255330148ae9e33b013 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1939 ba572d0bdd163255330148ae9e33b013 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-36 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1939 ba572d0bdd163255330148ae9e33b013 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1939 ba572d0bdd163255330148ae9e33b013 137 SUPERFAMILY SSF54686 1 134 9.42E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1939 ba572d0bdd163255330148ae9e33b013 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.981 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1939 ba572d0bdd163255330148ae9e33b013 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.2E-48 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Atu1939 ba572d0bdd163255330148ae9e33b013 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1939 ba572d0bdd163255330148ae9e33b013 137 Gene3D G3DSA:3.90.1170.10 1 137 8.5E-56 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Atu2250 6f376638a9b82a8d5aa49e79542f7693 418 SUPERFAMILY SSF81891 149 418 3.01E-47 T 14-10-2018 Atu2250 6f376638a9b82a8d5aa49e79542f7693 418 Gene3D G3DSA:3.30.460.10 4 147 5.3E-40 T 14-10-2018 Atu2250 6f376638a9b82a8d5aa49e79542f7693 418 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 191 239 1.9E-8 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Atu2250 6f376638a9b82a8d5aa49e79542f7693 418 Gene3D G3DSA:1.10.3090.10 148 405 3.6E-33 T 14-10-2018 Atu2250 6f376638a9b82a8d5aa49e79542f7693 418 Pfam PF01743 Poly A polymerase head domain 30 151 2.5E-25 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Atu2250 6f376638a9b82a8d5aa49e79542f7693 418 SUPERFAMILY SSF81301 8 148 2.94E-37 T 14-10-2018 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 SUPERFAMILY SSF46458 7 161 3.22E-36 T 14-10-2018 IPR009050 Globin-like superfamily Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 452 5.8E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 Pfam PF11563 Protoglobin 9 166 7.3E-41 T 14-10-2018 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 SUPERFAMILY SSF58104 204 487 2.88E-65 T 14-10-2018 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 258 287 3.2E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 335 362 3.2E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 393 3.2E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 3.2E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 Gene3D G3DSA:1.10.490.10 3 161 1.1E-43 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 SMART SM00283 237 484 5.4E-93 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu1027 14aceaf88dbe65c07a051e1ed9d85675 499 Gene3D G3DSA:1.10.287.950 186 486 5.5E-75 T 14-10-2018 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 315 1.9E-61 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 SUPERFAMILY SSF55174 15 66 1.83E-8 T 14-10-2018 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 Gene3D G3DSA:3.30.2350.10 93 318 4.3E-64 T 14-10-2018 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 Gene3D G3DSA:3.10.290.10 5 69 3.5E-13 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 Pfam PF00849 RNA pseudouridylate synthase 103 255 1.1E-34 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu1471 fe35809a9dc911e4e74540f1f5600350 329 SUPERFAMILY SSF55120 93 323 2.08E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 Gene3D G3DSA:2.40.50.940 222 345 3.6E-31 T 14-10-2018 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 Gene3D G3DSA:2.40.50.140 284 336 3.6E-31 T 14-10-2018 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 Pfam PF08402 TOBE domain 278 344 5.8E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 Gene3D G3DSA:3.40.50.300 4 221 1.2E-66 T 14-10-2018 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 Pfam PF00005 ABC transporter 20 161 7.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 SMART SM00382 28 216 5.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 SUPERFAMILY SSF52540 4 242 1.19E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2508 33dd4f792f24ed1baee2ecf12d7e6cd3 352 SUPERFAMILY SSF50331 236 352 3.16E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Gene3D G3DSA:3.30.70.100 11 76 2.2E-18 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 816 2.8E-193 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Gene3D G3DSA:3.30.70.100 77 148 2.0E-22 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 SUPERFAMILY SSF81665 252 785 7.98E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Gene3D G3DSA:2.70.150.20 299 411 1.5E-42 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 SUPERFAMILY SSF81653 310 406 1.83E-31 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 SUPERFAMILY SSF55008 77 143 1.11E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Gene3D G3DSA:3.40.1110.10 519 639 1.2E-91 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 817 3.7E-182 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Pfam PF00403 Heavy-metal-associated domain 81 141 2.1E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Pfam PF00403 Heavy-metal-associated domain 14 72 2.5E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 785 2.1E-93 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Gene3D G3DSA:3.40.50.1000 489 759 1.2E-91 T 14-10-2018 IPR023214 HAD superfamily Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 SUPERFAMILY SSF55008 12 75 1.57E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Pfam PF00702 haloacid dehalogenase-like hydrolase 505 721 9.7E-42 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 Pfam PF00122 E1-E2 ATPase 307 487 7.9E-60 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 707 726 8.9E-29 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 742 8.9E-29 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 8.9E-29 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 8.9E-29 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 643 8.9E-29 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 664 8.9E-29 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 SUPERFAMILY SSF56784 506 814 2.27E-62 T 14-10-2018 IPR036412 HAD-like superfamily Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 45 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00943 Copper-transporting ATPase signature 684 701 8.1E-10 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00943 Copper-transporting ATPase signature 224 243 8.1E-10 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00943 Copper-transporting ATPase signature 429 443 8.1E-10 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00943 Copper-transporting ATPase signature 276 295 8.1E-10 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00943 Copper-transporting ATPase signature 741 755 8.1E-10 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 PRINTS PR00943 Copper-transporting ATPase signature 780 794 8.1E-10 T 14-10-2018 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 ProSitePatterns PS01047 Heavy-metal-associated domain. 83 112 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 79 142 1.4E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atu1195 a4eadd835f619b03b28e1e25e0f32655 836 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 13 75 3.0E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 SUPERFAMILY SSF75217 122 287 5.23E-40 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 SMART SM00967 60 134 7.2E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 61 132 1.2E-10 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 59 286 1.8E-48 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 Gene3D G3DSA:3.30.1330.30 52 129 5.7E-5 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 SUPERFAMILY SSF55315 49 131 2.24E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 Gene3D G3DSA:3.40.1280.10 130 288 2.4E-43 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu1993 45fe15b54d641c1c7f15f6c676668c64 295 Pfam PF00588 SpoU rRNA Methylase family 144 284 4.6E-32 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atu1609 523e011279e20f220f67a7107a58a62d 579 Pfam PF09977 Putative Tad-like Flp pilus-assembly 61 170 4.1E-24 T 14-10-2018 IPR018705 Domain of unknown function DUF2134, membrane Atu3143 0d031c08609846c8095547db2ea889ed 265 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 161 4.4E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu3143 0d031c08609846c8095547db2ea889ed 265 SUPERFAMILY SSF51735 1 233 3.91E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3143 0d031c08609846c8095547db2ea889ed 265 Gene3D G3DSA:3.40.50.720 1 226 5.2E-64 T 14-10-2018 Atu0164 99616bef9ef919edb59d493ef7661322 329 Pfam PF02615 Malate/L-lactate dehydrogenase 4 327 1.7E-99 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 Atu0164 99616bef9ef919edb59d493ef7661322 329 SUPERFAMILY SSF89733 1 328 3.79E-99 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 Atu0164 99616bef9ef919edb59d493ef7661322 329 Gene3D G3DSA:3.30.60.50 177 224 4.0E-99 T 14-10-2018 Atu0164 99616bef9ef919edb59d493ef7661322 329 Gene3D G3DSA:1.10.1530.10 10 325 4.0E-99 T 14-10-2018 Atu0164 99616bef9ef919edb59d493ef7661322 329 Gene3D G3DSA:3.30.1370.60 61 299 4.0E-99 T 14-10-2018 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 SMART SM00421 146 203 1.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 Gene3D G3DSA:3.40.50.2300 6 140 1.8E-45 T 14-10-2018 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 Pfam PF00072 Response regulator receiver domain 13 122 7.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 2.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 SMART SM00448 11 122 1.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 SUPERFAMILY SSF52172 10 157 2.13E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 SUPERFAMILY SSF46894 139 203 1.12E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4300 bb457cea40fd1b2c1de77c66aa5fe4d6 211 Gene3D G3DSA:1.10.10.10 141 203 2.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2594 2c05fe53a7496b2e2b25b2435f940551 401 SUPERFAMILY SSF103473 12 394 4.01E-28 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2594 2c05fe53a7496b2e2b25b2435f940551 401 Pfam PF07690 Major Facilitator Superfamily 19 235 1.0E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2594 2c05fe53a7496b2e2b25b2435f940551 401 Gene3D G3DSA:1.20.1250.20 7 201 2.0E-14 T 14-10-2018 Atu2594 2c05fe53a7496b2e2b25b2435f940551 401 Gene3D G3DSA:1.20.1250.20 212 399 8.6E-11 T 14-10-2018 Atu5395 206c27aa50ed97c19adc48a015628949 461 Gene3D G3DSA:1.20.1250.20 31 460 1.1E-87 T 14-10-2018 Atu5395 206c27aa50ed97c19adc48a015628949 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu5395 206c27aa50ed97c19adc48a015628949 461 Pfam PF00083 Sugar (and other) transporter 69 459 5.6E-49 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu5395 206c27aa50ed97c19adc48a015628949 461 SUPERFAMILY SSF103473 23 458 8.63E-84 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2326 528f0fa611efbc4bb0d52255c880344f 97 SUPERFAMILY SSF81301 2 96 3.27E-19 T 14-10-2018 Atu2326 528f0fa611efbc4bb0d52255c880344f 97 Pfam PF01909 Nucleotidyltransferase domain 21 83 3.9E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Atu2326 528f0fa611efbc4bb0d52255c880344f 97 Gene3D G3DSA:3.30.460.10 3 97 4.7E-20 T 14-10-2018 Atu1047 5da1527ca10ae0bbe2964f850735cc97 251 Gene3D G3DSA:3.40.50.300 1 243 2.2E-58 T 14-10-2018 Atu1047 5da1527ca10ae0bbe2964f850735cc97 251 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1047 5da1527ca10ae0bbe2964f850735cc97 251 SUPERFAMILY SSF52540 5 229 2.66E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1047 5da1527ca10ae0bbe2964f850735cc97 251 SMART SM00382 21 209 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1047 5da1527ca10ae0bbe2964f850735cc97 251 Pfam PF00005 ABC transporter 14 158 2.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0314 8fe2a8454160f8c7fd515b912a591105 156 SUPERFAMILY SSF51283 16 156 7.33E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily Atu0314 8fe2a8454160f8c7fd515b912a591105 156 TIGRFAM TIGR00576 dut: dUTP diphosphatase 20 155 3.3E-54 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Atu0314 8fe2a8454160f8c7fd515b912a591105 156 Pfam PF00692 dUTPase 23 155 2.8E-32 T 14-10-2018 IPR029054 dUTPase-like Atu0314 8fe2a8454160f8c7fd515b912a591105 156 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 9 156 34.82 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Atu0314 8fe2a8454160f8c7fd515b912a591105 156 Gene3D G3DSA:2.70.40.10 9 155 6.0E-57 T 14-10-2018 IPR036157 dUTPase-like superfamily Atu1767 cca2f58162a16e781e18d1124283ef8e 346 SUPERFAMILY SSF52317 10 205 4.93E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1767 cca2f58162a16e781e18d1124283ef8e 346 Pfam PF01965 DJ-1/PfpI family 10 183 7.5E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu1767 cca2f58162a16e781e18d1124283ef8e 346 Gene3D G3DSA:3.40.50.880 5 212 1.3E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1767 cca2f58162a16e781e18d1124283ef8e 346 Pfam PF12833 Helix-turn-helix domain 246 323 2.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1767 cca2f58162a16e781e18d1124283ef8e 346 SMART SM00342 240 323 5.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1767 cca2f58162a16e781e18d1124283ef8e 346 SUPERFAMILY SSF46689 224 274 4.12E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1767 cca2f58162a16e781e18d1124283ef8e 346 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu1767 cca2f58162a16e781e18d1124283ef8e 346 Gene3D G3DSA:1.10.10.60 220 328 1.2E-33 T 14-10-2018 Atu1767 cca2f58162a16e781e18d1124283ef8e 346 SUPERFAMILY SSF46689 276 326 5.82E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu6017 f0c7b7397dcbf969278648bdb8df0c87 360 Gene3D G3DSA:1.10.1040.10 189 339 1.1E-35 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu6017 f0c7b7397dcbf969278648bdb8df0c87 360 SUPERFAMILY SSF48179 181 340 1.97E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu6017 f0c7b7397dcbf969278648bdb8df0c87 360 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 180 322 7.1E-30 T 14-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Atu6017 f0c7b7397dcbf969278648bdb8df0c87 360 Gene3D G3DSA:3.40.50.720 1 188 1.7E-29 T 14-10-2018 Atu6017 f0c7b7397dcbf969278648bdb8df0c87 360 SUPERFAMILY SSF51735 1 112 5.38E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu6017 f0c7b7397dcbf969278648bdb8df0c87 360 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 100 2.7E-8 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Atu0410 104e8f62802a3c52777f83eba874eacb 287 Gene3D G3DSA:1.10.10.60 238 286 5.8E-16 T 14-10-2018 Atu0410 104e8f62802a3c52777f83eba874eacb 287 SUPERFAMILY SSF46689 237 285 1.93E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0410 104e8f62802a3c52777f83eba874eacb 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu0410 104e8f62802a3c52777f83eba874eacb 287 SUPERFAMILY SSF46689 184 234 1.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0410 104e8f62802a3c52777f83eba874eacb 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 2.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu0410 104e8f62802a3c52777f83eba874eacb 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 2.2E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu0410 104e8f62802a3c52777f83eba874eacb 287 Gene3D G3DSA:1.10.10.60 180 237 7.7E-16 T 14-10-2018 Atu0410 104e8f62802a3c52777f83eba874eacb 287 Pfam PF12833 Helix-turn-helix domain 206 284 6.6E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0410 104e8f62802a3c52777f83eba874eacb 287 SMART SM00342 200 283 2.1E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu2565 7bb46a56850e704b6d8e65acd371aae8 334 Pfam PF03576 Peptidase family S58 6 319 3.1E-54 T 14-10-2018 IPR005321 Peptidase S58, DmpA Atu2565 7bb46a56850e704b6d8e65acd371aae8 334 Gene3D G3DSA:3.60.70.12 1 333 4.4E-94 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu2565 7bb46a56850e704b6d8e65acd371aae8 334 SUPERFAMILY SSF56266 3 332 1.12E-68 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu0388 8846a126de3d249cbc933bf22ee0be70 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0388 8846a126de3d249cbc933bf22ee0be70 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0388 8846a126de3d249cbc933bf22ee0be70 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 1.8E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0388 8846a126de3d249cbc933bf22ee0be70 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 478 6.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0388 8846a126de3d249cbc933bf22ee0be70 491 SUPERFAMILY SSF55874 329 478 3.27E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0388 8846a126de3d249cbc933bf22ee0be70 491 Gene3D G3DSA:3.30.565.10 330 483 5.2E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0388 8846a126de3d249cbc933bf22ee0be70 491 SMART SM00304 201 256 0.0092 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0388 8846a126de3d249cbc933bf22ee0be70 491 Gene3D G3DSA:1.10.287.130 199 321 2.1E-8 T 14-10-2018 Atu0388 8846a126de3d249cbc933bf22ee0be70 491 SMART SM00387 369 482 5.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 Gene3D G3DSA:1.10.10.10 10 94 6.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 Pfam PF03466 LysR substrate binding domain 97 294 6.4E-33 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 SUPERFAMILY SSF53850 98 298 4.34E-37 T 14-10-2018 Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 Gene3D G3DSA:3.40.190.10 107 291 2.2E-56 T 14-10-2018 Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 4.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 SUPERFAMILY SSF46785 6 118 1.32E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4419 84e574f72b42699eb4afb9be4e0ba489 306 Gene3D G3DSA:3.40.190.10 167 264 2.2E-56 T 14-10-2018 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Gene3D G3DSA:1.10.10.60 459 503 1.3E-14 T 14-10-2018 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 SMART SM00382 165 309 7.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3764 3dd2015efdbeefec5c463fec222803ca 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 SUPERFAMILY SSF46689 450 504 3.78E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atu3764 3dd2015efdbeefec5c463fec222803ca 513 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 484 504 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 484 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 SUPERFAMILY SSF52172 4 187 1.71E-39 T 14-10-2018 IPR011006 CheY-like superfamily Atu3764 3dd2015efdbeefec5c463fec222803ca 513 SMART SM00448 3 116 4.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Gene3D G3DSA:1.10.8.60 316 395 6.8E-22 T 14-10-2018 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Pfam PF02954 Bacterial regulatory protein, Fis family 461 501 4.0E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Gene3D G3DSA:3.40.50.300 136 315 4.1E-63 T 14-10-2018 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Pfam PF00158 Sigma-54 interaction domain 145 311 2.5E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 SUPERFAMILY SSF52540 144 388 1.21E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Pfam PF00072 Response regulator receiver domain 5 116 3.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3764 3dd2015efdbeefec5c463fec222803ca 513 Gene3D G3DSA:3.40.50.2300 1 135 1.5E-33 T 14-10-2018 Atu0858 a2cbd4169e9eb46f1e313b73b25498f3 177 Gene3D G3DSA:1.20.1290.10 47 170 8.0E-29 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0858 a2cbd4169e9eb46f1e313b73b25498f3 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 79 159 2.0E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu0858 a2cbd4169e9eb46f1e313b73b25498f3 177 SUPERFAMILY SSF69118 44 168 9.55E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu3185 059809b379f372f01953f2740717d19f 439 Gene3D G3DSA:3.40.190.10 35 387 9.9E-126 T 14-10-2018 Atu3185 059809b379f372f01953f2740717d19f 439 Gene3D G3DSA:3.40.190.10 151 428 9.9E-126 T 14-10-2018 Atu3185 059809b379f372f01953f2740717d19f 439 Pfam PF13416 Bacterial extracellular solute-binding protein 50 373 2.2E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3185 059809b379f372f01953f2740717d19f 439 SUPERFAMILY SSF53850 31 429 5.43E-72 T 14-10-2018 Atu2610 564dbe413be08241ee74bb562970b462 423 Gene3D G3DSA:3.50.50.60 271 385 1.4E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2610 564dbe413be08241ee74bb562970b462 423 Pfam PF01494 FAD binding domain 25 367 1.0E-47 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu2610 564dbe413be08241ee74bb562970b462 423 Gene3D G3DSA:3.50.50.60 12 205 1.0E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2610 564dbe413be08241ee74bb562970b462 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 332 5.3E-22 T 14-10-2018 Atu2610 564dbe413be08241ee74bb562970b462 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 5.3E-22 T 14-10-2018 Atu2610 564dbe413be08241ee74bb562970b462 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 316 5.3E-22 T 14-10-2018 Atu2610 564dbe413be08241ee74bb562970b462 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 26 48 5.3E-22 T 14-10-2018 Atu2610 564dbe413be08241ee74bb562970b462 423 SUPERFAMILY SSF51905 27 373 4.63E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4550 0a7beee588b0995d846efcd126a6f96b 342 Pfam PF13407 Periplasmic binding protein domain 67 303 3.0E-25 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4550 0a7beee588b0995d846efcd126a6f96b 342 SMART SM00354 3 75 2.2E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 Gene3D G3DSA:3.40.50.2300 169 300 5.9E-26 T 14-10-2018 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 Gene3D G3DSA:1.10.260.40 1 47 2.4E-17 T 14-10-2018 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 Gene3D G3DSA:3.40.50.2300 119 306 5.9E-26 T 14-10-2018 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 1.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 1.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 SUPERFAMILY SSF47413 1 51 9.57E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 4.0E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4550 0a7beee588b0995d846efcd126a6f96b 342 SUPERFAMILY SSF53822 63 326 6.02E-30 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4550 0a7beee588b0995d846efcd126a6f96b 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 Atu3154 5b82cb11ae70073da92a630eb9a04ea9 398 SUPERFAMILY SSF103473 12 392 6.41E-50 T 14-10-2018 IPR036259 MFS transporter superfamily Atu3154 5b82cb11ae70073da92a630eb9a04ea9 398 Gene3D G3DSA:1.20.1250.20 216 394 2.1E-15 T 14-10-2018 Atu3154 5b82cb11ae70073da92a630eb9a04ea9 398 Gene3D G3DSA:1.20.1250.20 11 203 1.9E-21 T 14-10-2018 Atu3154 5b82cb11ae70073da92a630eb9a04ea9 398 Pfam PF07690 Major Facilitator Superfamily 23 359 1.1E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2707 1865b91130c155544472762689f2d6f9 317 SUPERFAMILY SSF51120 109 296 3.14E-16 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu2707 1865b91130c155544472762689f2d6f9 317 PRINTS PR00313 NodO calcium binding signature 226 234 3.1E-6 T 14-10-2018 Atu2707 1865b91130c155544472762689f2d6f9 317 PRINTS PR00313 NodO calcium binding signature 235 244 3.1E-6 T 14-10-2018 Atu2707 1865b91130c155544472762689f2d6f9 317 PRINTS PR00313 NodO calcium binding signature 205 213 3.1E-6 T 14-10-2018 Atu2707 1865b91130c155544472762689f2d6f9 317 PRINTS PR00313 NodO calcium binding signature 154 165 3.1E-6 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 Gene3D G3DSA:3.40.50.880 529 720 4.3E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 Gene3D G3DSA:3.60.120.10 20 516 7.6E-127 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 Pfam PF00425 chorismate binding enzyme 247 499 5.9E-66 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 531 717 3.1E-39 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 SUPERFAMILY SSF56322 19 507 6.67E-125 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PIRSF PIRSF036934 1 729 0.0 T 14-10-2018 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 Pfam PF04715 Anthranilate synthase component I, N terminal region 48 206 8.9E-9 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 SUPERFAMILY SSF52317 528 717 1.48E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 Pfam PF00117 Glutamine amidotransferase class-I 533 706 3.6E-42 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 13 729 0.0 T 14-10-2018 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00096 Glutamine amidotransferase superfamily signature 602 613 4.1E-10 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00096 Glutamine amidotransferase superfamily signature 575 584 4.1E-10 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00096 Glutamine amidotransferase superfamily signature 693 706 4.1E-10 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00097 Anthranilate synthase component II signature 627 635 1.1E-21 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00097 Anthranilate synthase component II signature 531 545 1.1E-21 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00097 Anthranilate synthase component II signature 602 613 1.1E-21 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00097 Anthranilate synthase component II signature 575 584 1.1E-21 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00097 Anthranilate synthase component II signature 648 660 1.1E-21 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00097 Anthranilate synthase component II signature 693 706 1.1E-21 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 572 586 1.6E-6 T 14-10-2018 Atu2289 ccc2fc71545ec0ac6b475c03a028e899 729 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 602 618 1.6E-6 T 14-10-2018 Atu3119 fe734b2c651a0bace500bcf7356d2732 411 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 130 4.8E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3119 fe734b2c651a0bace500bcf7356d2732 411 SUPERFAMILY SSF55347 136 356 3.43E-29 T 14-10-2018 Atu3119 fe734b2c651a0bace500bcf7356d2732 411 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 218 4.2E-15 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu3119 fe734b2c651a0bace500bcf7356d2732 411 SUPERFAMILY SSF51735 7 162 4.19E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3119 fe734b2c651a0bace500bcf7356d2732 411 Gene3D G3DSA:3.40.50.720 4 141 1.9E-30 T 14-10-2018 Atu0915 e95f43cb154f5c3893505e26e5f7bd75 110 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 15 106 3.5E-28 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Atu0915 e95f43cb154f5c3893505e26e5f7bd75 110 Pfam PF03334 Na+/H+ antiporter subunit 14 92 1.7E-24 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Atu1792 a3fe77515ad7dde675260a118606277d 514 SMART SM00382 28 214 4.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1792 a3fe77515ad7dde675260a118606277d 514 Pfam PF00005 ABC transporter 20 164 9.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1792 a3fe77515ad7dde675260a118606277d 514 SUPERFAMILY SSF52540 2 219 9.78E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1792 a3fe77515ad7dde675260a118606277d 514 SUPERFAMILY SSF52540 252 490 8.04E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1792 a3fe77515ad7dde675260a118606277d 514 Gene3D G3DSA:3.40.50.300 1 231 6.7E-64 T 14-10-2018 Atu1792 a3fe77515ad7dde675260a118606277d 514 Gene3D G3DSA:3.40.50.300 237 496 2.4E-33 T 14-10-2018 Atu1792 a3fe77515ad7dde675260a118606277d 514 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1792 a3fe77515ad7dde675260a118606277d 514 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1792 a3fe77515ad7dde675260a118606277d 514 Pfam PF00005 ABC transporter 269 431 4.6E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2044 13d57ab29a7ad49288f4ed401bdc142d 307 Pfam PF01145 SPFH domain / Band 7 family 25 204 1.1E-23 T 14-10-2018 IPR001107 Band 7 domain Atu2044 13d57ab29a7ad49288f4ed401bdc142d 307 SMART SM00244 21 188 6.5E-16 T 14-10-2018 IPR001107 Band 7 domain Atu2044 13d57ab29a7ad49288f4ed401bdc142d 307 Gene3D G3DSA:3.30.479.30 58 190 6.9E-14 T 14-10-2018 Atu2044 13d57ab29a7ad49288f4ed401bdc142d 307 SUPERFAMILY SSF117892 61 194 3.66E-16 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Atu2044 13d57ab29a7ad49288f4ed401bdc142d 307 PIRSF PIRSF005651 1 295 3.9E-76 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Atu2453 d3a53759b92220e43997e98b5a200dcc 314 Gene3D G3DSA:3.10.180.10 7 305 4.7E-104 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2453 d3a53759b92220e43997e98b5a200dcc 314 SUPERFAMILY SSF54593 4 283 6.32E-43 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2453 d3a53759b92220e43997e98b5a200dcc 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 268 3.1E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu2453 d3a53759b92220e43997e98b5a200dcc 314 Gene3D G3DSA:3.10.180.10 67 212 4.7E-104 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 Gene3D G3DSA:3.40.190.80 143 261 7.3E-33 T 14-10-2018 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 Pfam PF00459 Inositol monophosphatase family 5 257 9.0E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 4.4E-57 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 4.4E-57 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 4.4E-57 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 4.4E-57 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 4.4E-57 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 4.4E-57 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 6.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 200 212 6.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 19 41 6.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 6.6E-24 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 SUPERFAMILY SSF56655 5 259 1.83E-84 T 14-10-2018 Atu3748 2dd422dbbbfe575dc18ab48401cbcaa5 266 Gene3D G3DSA:3.30.540.10 1 142 3.7E-56 T 14-10-2018 Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 Gene3D G3DSA:3.10.580.10 302 379 1.6E-17 T 14-10-2018 Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 Pfam PF04982 HPP family 51 171 3.2E-38 T 14-10-2018 IPR007065 HPP Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 SMART SM00116 245 293 8.1E-8 T 14-10-2018 IPR000644 CBS domain Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 SMART SM00116 328 376 1.5E-9 T 14-10-2018 IPR000644 CBS domain Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 Gene3D G3DSA:3.10.580.10 213 298 4.1E-15 T 14-10-2018 Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 Pfam PF00571 CBS domain 321 375 2.5E-14 T 14-10-2018 IPR000644 CBS domain Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 Pfam PF00571 CBS domain 240 291 6.1E-12 T 14-10-2018 IPR000644 CBS domain Atu1509 782e47fb68a6d27f892d6b3194fc00b4 382 SUPERFAMILY SSF54631 227 372 4.47E-33 T 14-10-2018 Atu0088 a53fecd32abf4e4765ab1a3a747a09e9 233 SUPERFAMILY SSF55315 108 199 7.54E-8 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Atu0088 a53fecd32abf4e4765ab1a3a747a09e9 233 Gene3D G3DSA:3.30.1230.10 20 108 4.9E-16 T 14-10-2018 IPR035931 YlxR-like superfamily Atu0088 a53fecd32abf4e4765ab1a3a747a09e9 233 SUPERFAMILY SSF64376 24 111 1.83E-25 T 14-10-2018 IPR035931 YlxR-like superfamily Atu0088 a53fecd32abf4e4765ab1a3a747a09e9 233 Pfam PF04296 Protein of unknown function (DUF448) 27 96 1.1E-22 T 14-10-2018 IPR007393 Domain of unknown function DUF448 Atu0088 a53fecd32abf4e4765ab1a3a747a09e9 233 Gene3D G3DSA:3.30.1330.30 109 208 1.2E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Atu3299 de61fc21c104a8d0d2d0942530fe26f5 145 SUPERFAMILY SSF103481 50 144 3.66E-20 T 14-10-2018 Atu3299 de61fc21c104a8d0d2d0942530fe26f5 145 Pfam PF00892 EamA-like transporter family 8 142 2.5E-26 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4523 90f2893422abe2877cdbd8fa06e899a1 282 Gene3D G3DSA:1.10.3720.10 68 275 2.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu4523 90f2893422abe2877cdbd8fa06e899a1 282 SUPERFAMILY SSF161098 76 260 1.57E-24 T 14-10-2018 IPR035906 MetI-like superfamily Atu4523 90f2893422abe2877cdbd8fa06e899a1 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 276 4.3E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6119 63c76cb9e623bd7c87da6d17ff6112c1 118 Pfam PF05284 Protein of unknown function (DUF736) 17 114 1.4E-31 T 14-10-2018 IPR007948 Protein of unknown function DUF736 Atu1762 0f53d6a6c7a6bda139c49fd6d468a6ba 254 Pfam PF09992 Phosphodiester glycosidase 83 227 9.8E-19 T 14-10-2018 IPR018711 Phosphodiester glycosidase Atu5378 165be469665f629e4008d11e8346a08c 126 SUPERFAMILY SSF52172 7 125 8.4E-27 T 14-10-2018 IPR011006 CheY-like superfamily Atu5378 165be469665f629e4008d11e8346a08c 126 Pfam PF00072 Response regulator receiver domain 11 121 1.6E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5378 165be469665f629e4008d11e8346a08c 126 Gene3D G3DSA:3.40.50.2300 7 126 1.6E-30 T 14-10-2018 Atu5378 165be469665f629e4008d11e8346a08c 126 SMART SM00448 9 121 4.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4690 6b571cfafd752a5bd8f7ad28f065d450 222 Gene3D G3DSA:3.40.50.300 1 222 3.8E-72 T 14-10-2018 Atu4690 6b571cfafd752a5bd8f7ad28f065d450 222 Pfam PF00005 ABC transporter 1 146 5.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4690 6b571cfafd752a5bd8f7ad28f065d450 222 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4690 6b571cfafd752a5bd8f7ad28f065d450 222 SUPERFAMILY SSF52540 1 216 4.48E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4690 6b571cfafd752a5bd8f7ad28f065d450 222 SMART SM00382 7 194 7.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4690 6b571cfafd752a5bd8f7ad28f065d450 222 PIRSF PIRSF039085 1 222 2.0E-96 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 321 347 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 66 86 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 96 121 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 356 375 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 172 194 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 PRINTS PR00173 Glutamate-aspartate symporter signature 382 402 3.5E-31 T 14-10-2018 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 Pfam PF00375 Sodium:dicarboxylate symporter family 22 427 3.3E-108 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 SUPERFAMILY SSF118215 21 428 1.11E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Atu0804 1ffbe64ada0fbbc778450ab9a6da7abc 454 Gene3D G3DSA:1.10.3860.10 14 445 1.1E-113 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 Gene3D G3DSA:1.10.10.10 16 79 1.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 Gene3D G3DSA:3.30.450.40 93 261 2.7E-28 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 Pfam PF01614 Bacterial transcriptional regulator 143 259 1.2E-7 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 Pfam PF09339 IclR helix-turn-helix domain 19 70 3.7E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 SUPERFAMILY SSF55781 83 263 4.19E-34 T 14-10-2018 Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 SMART SM00346 17 108 6.5E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4824 28a0829848e926de3e9c5ed423aeab2a 288 SUPERFAMILY SSF46785 19 91 7.55E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3207 83e9840eee1ae500a9c94faf559d3373 664 Gene3D G3DSA:3.20.20.450 405 652 5.0E-76 T 14-10-2018 IPR035919 EAL domain superfamily Atu3207 83e9840eee1ae500a9c94faf559d3373 664 Gene3D G3DSA:3.30.70.270 215 397 1.6E-50 T 14-10-2018 Atu3207 83e9840eee1ae500a9c94faf559d3373 664 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 227 394 2.2E-43 T 14-10-2018 IPR000160 GGDEF domain Atu3207 83e9840eee1ae500a9c94faf559d3373 664 SMART SM00052 405 646 3.6E-68 T 14-10-2018 IPR001633 EAL domain Atu3207 83e9840eee1ae500a9c94faf559d3373 664 Pfam PF00563 EAL domain 413 641 2.7E-61 T 14-10-2018 IPR001633 EAL domain Atu3207 83e9840eee1ae500a9c94faf559d3373 664 SUPERFAMILY SSF55073 234 397 3.77E-41 T 14-10-2018 IPR029787 Nucleotide cyclase Atu3207 83e9840eee1ae500a9c94faf559d3373 664 SUPERFAMILY SSF141868 413 650 1.07E-71 T 14-10-2018 IPR035919 EAL domain superfamily Atu3207 83e9840eee1ae500a9c94faf559d3373 664 SMART SM00267 218 395 2.3E-51 T 14-10-2018 IPR000160 GGDEF domain Atu3207 83e9840eee1ae500a9c94faf559d3373 664 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 390 2.2E-44 T 14-10-2018 IPR000160 GGDEF domain Atu0147 f5e900b815f443c9a8b7c9e366f24408 168 Pfam PF07811 TadE-like protein 2 39 3.9E-7 T 14-10-2018 IPR012495 TadE-like Atu2753 9d97c1c810c3798c3491e7d03f7c313a 1032 SUPERFAMILY SSF52540 135 384 3.85E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2753 9d97c1c810c3798c3491e7d03f7c313a 1032 SUPERFAMILY SSF52540 9 117 3.43E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2753 9d97c1c810c3798c3491e7d03f7c313a 1032 Gene3D G3DSA:3.40.50.300 3 144 1.3E-27 T 14-10-2018 Atu2753 9d97c1c810c3798c3491e7d03f7c313a 1032 SMART SM00490 178 267 3.7E-8 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2753 9d97c1c810c3798c3491e7d03f7c313a 1032 Gene3D G3DSA:3.40.50.300 148 291 6.9E-31 T 14-10-2018 Atu2753 9d97c1c810c3798c3491e7d03f7c313a 1032 Pfam PF00271 Helicase conserved C-terminal domain 164 265 5.4E-7 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2373 ca40908a7d3e74ca464e53ebecc3238f 314 Pfam PF00535 Glycosyl transferase family 2 10 176 4.0E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu2373 ca40908a7d3e74ca464e53ebecc3238f 314 Gene3D G3DSA:3.90.550.10 2 226 2.1E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu2373 ca40908a7d3e74ca464e53ebecc3238f 314 SUPERFAMILY SSF53448 10 256 5.72E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3521 6229dd11a68edc39b93230620dd81191 297 SUPERFAMILY SSF103481 188 281 4.71E-13 T 14-10-2018 Atu3521 6229dd11a68edc39b93230620dd81191 297 SUPERFAMILY SSF103481 41 138 1.05E-9 T 14-10-2018 Atu3521 6229dd11a68edc39b93230620dd81191 297 Pfam PF00892 EamA-like transporter family 149 282 4.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu3521 6229dd11a68edc39b93230620dd81191 297 Pfam PF00892 EamA-like transporter family 10 136 1.2E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2240 ee52e36bbcd09ee84f366a3cb589dcf0 310 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 98 283 6.5E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atu2240 ee52e36bbcd09ee84f366a3cb589dcf0 310 Gene3D G3DSA:3.60.10.10 93 309 1.9E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu2240 ee52e36bbcd09ee84f366a3cb589dcf0 310 SUPERFAMILY SSF56219 94 306 1.07E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu3875 8fc1c4a340561343ac9dd84206620acc 280 PIRSF PIRSF038992 1 280 1.8E-68 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu3875 8fc1c4a340561343ac9dd84206620acc 280 SMART SM01133 18 250 2.6E-7 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu3875 8fc1c4a340561343ac9dd84206620acc 280 Gene3D G3DSA:3.20.20.70 1 279 3.8E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3875 8fc1c4a340561343ac9dd84206620acc 280 SUPERFAMILY SSF51569 5 266 2.23E-56 T 14-10-2018 Atu3875 8fc1c4a340561343ac9dd84206620acc 280 Pfam PF01791 DeoC/LacD family aldolase 19 250 5.5E-49 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu1022 5cb8e3d7bb24509cd784751913f21285 682 Pfam PF01464 Transglycosylase SLT domain 525 628 5.4E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu1022 5cb8e3d7bb24509cd784751913f21285 682 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 534 562 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Atu1022 5cb8e3d7bb24509cd784751913f21285 682 SUPERFAMILY SSF48435 55 500 6.28E-74 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Atu1022 5cb8e3d7bb24509cd784751913f21285 682 Gene3D G3DSA:1.25.20.10 60 421 2.1E-6 T 14-10-2018 Atu1022 5cb8e3d7bb24509cd784751913f21285 682 Gene3D G3DSA:1.10.530.10 516 680 7.7E-40 T 14-10-2018 Atu1022 5cb8e3d7bb24509cd784751913f21285 682 SUPERFAMILY SSF53955 521 675 1.39E-39 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 Pfam PF14525 AraC-binding-like domain 30 201 5.6E-19 T 14-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 Gene3D G3DSA:1.10.10.60 211 328 3.7E-24 T 14-10-2018 Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 SMART SM00342 233 317 3.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 SUPERFAMILY SSF46689 267 318 4.89E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 313 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 Pfam PF12833 Helix-turn-helix domain 241 317 3.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 5.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4132 c89312dc6a09a029470ec6c96a7a26ce 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 5.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu0569 e128e4e3957f992005882720727804d7 433 Gene3D G3DSA:3.30.1330.60 276 432 2.5E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu0569 e128e4e3957f992005882720727804d7 433 Pfam PF00691 OmpA family 341 418 3.9E-8 T 14-10-2018 IPR006665 OmpA-like domain Atu0569 e128e4e3957f992005882720727804d7 433 SUPERFAMILY SSF103088 324 428 1.28E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu0569 e128e4e3957f992005882720727804d7 433 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 19 69 2.4E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain Atu4548 8ffe0bbce1165db5cc67d1d2c1e99ed0 231 Gene3D G3DSA:3.40.1080.10 11 223 3.6E-83 T 14-10-2018 Atu4548 8ffe0bbce1165db5cc67d1d2c1e99ed0 231 Pfam PF01144 Coenzyme A transferase 18 209 6.1E-31 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Atu4548 8ffe0bbce1165db5cc67d1d2c1e99ed0 231 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 14 218 4.0E-94 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 Atu4548 8ffe0bbce1165db5cc67d1d2c1e99ed0 231 SUPERFAMILY SSF100950 16 222 1.0E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu4548 8ffe0bbce1165db5cc67d1d2c1e99ed0 231 SMART SM00882 16 212 3.2E-55 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 PIRSF PIRSF036426 4 475 2.3E-177 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Gene3D G3DSA:3.40.50.720 4 117 3.0E-19 T 14-10-2018 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 221 456 4.8E-82 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Gene3D G3DSA:3.30.160.110 119 154 1.4E-13 T 14-10-2018 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 SUPERFAMILY SSF51735 6 119 1.97E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3899 33b93982847199a5b4cf7be8a7160af0 475 SUPERFAMILY SSF75615 121 207 1.15E-20 T 14-10-2018 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 301 334 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 223 434 5.8E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Gene3D G3DSA:3.40.1010.10 220 336 1.6E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Gene3D G3DSA:3.30.950.10 337 472 1.7E-34 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Pfam PF14824 Sirohaem biosynthesis protein central 130 150 5.5E-6 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 226 240 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 213 7.8E-85 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Pfam PF10414 Sirohaem synthase dimerisation region 156 204 4.5E-10 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 Pfam PF13241 Putative NAD(P)-binding 9 121 5.2E-15 T 14-10-2018 Atu3899 33b93982847199a5b4cf7be8a7160af0 475 SUPERFAMILY SSF53790 219 456 4.45E-75 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu3953 fa6a2e5bda830319b95dc63952e2830b 332 SUPERFAMILY SSF54506 2 329 1.88E-106 T 14-10-2018 Atu3953 fa6a2e5bda830319b95dc63952e2830b 332 PIRSF PIRSF029792 1 332 1.1E-124 T 14-10-2018 IPR008794 Proline racemase family Atu3953 fa6a2e5bda830319b95dc63952e2830b 332 Pfam PF05544 Proline racemase 7 330 3.8E-129 T 14-10-2018 IPR008794 Proline racemase family Atu3953 fa6a2e5bda830319b95dc63952e2830b 332 Gene3D G3DSA:3.10.310.10 143 308 1.5E-98 T 14-10-2018 Atu3953 fa6a2e5bda830319b95dc63952e2830b 332 Gene3D G3DSA:3.10.310.10 7 330 1.5E-98 T 14-10-2018 Atu1854 1ff71d366e7b9cb0944a3b043b024bf8 111 PIRSF PIRSF005894 1 108 1.5E-51 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Atu1854 1ff71d366e7b9cb0944a3b043b024bf8 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 2.1E-47 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related Atu1854 1ff71d366e7b9cb0944a3b043b024bf8 111 Pfam PF00462 Glutaredoxin 17 81 8.9E-19 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atu1854 1ff71d366e7b9cb0944a3b043b024bf8 111 Gene3D G3DSA:3.40.30.10 7 102 3.1E-34 T 14-10-2018 Atu1854 1ff71d366e7b9cb0944a3b043b024bf8 111 SUPERFAMILY SSF52833 2 105 3.41E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0130 72a4ace086fbea5d5a3c55a4570ccf16 134 SUPERFAMILY SSF53927 9 130 5.02E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atu0130 72a4ace086fbea5d5a3c55a4570ccf16 134 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 9 131 4.8E-45 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Atu0130 72a4ace086fbea5d5a3c55a4570ccf16 134 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 2.4E-13 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Atu0130 72a4ace086fbea5d5a3c55a4570ccf16 134 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 97 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Atu0130 72a4ace086fbea5d5a3c55a4570ccf16 134 Gene3D G3DSA:3.40.140.10 2 133 8.0E-47 T 14-10-2018 Atu5514 0d41e4761e17b227e9d68f8349ea393d 201 SMART SM00271 142 200 7.1E-8 T 14-10-2018 IPR001623 DnaJ domain Atu5514 0d41e4761e17b227e9d68f8349ea393d 201 PRINTS PR00625 DnaJ domain signature 145 163 7.1E-5 T 14-10-2018 IPR001623 DnaJ domain Atu5514 0d41e4761e17b227e9d68f8349ea393d 201 PRINTS PR00625 DnaJ domain signature 163 178 7.1E-5 T 14-10-2018 IPR001623 DnaJ domain Atu5514 0d41e4761e17b227e9d68f8349ea393d 201 SUPERFAMILY SSF46565 143 196 1.96E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu5514 0d41e4761e17b227e9d68f8349ea393d 201 Gene3D G3DSA:1.10.287.110 116 198 4.1E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu5514 0d41e4761e17b227e9d68f8349ea393d 201 Pfam PF00226 DnaJ domain 144 196 3.7E-10 T 14-10-2018 IPR001623 DnaJ domain Atu4521 882cb268d1148808dba32ad163696d2f 274 Pfam PF12833 Helix-turn-helix domain 25 102 2.5E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4521 882cb268d1148808dba32ad163696d2f 274 SMART SM00871 126 273 2.6E-26 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding Atu4521 882cb268d1148808dba32ad163696d2f 274 Gene3D G3DSA:1.10.10.60 3 54 1.8E-10 T 14-10-2018 Atu4521 882cb268d1148808dba32ad163696d2f 274 SUPERFAMILY SSF46689 54 103 1.03E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4521 882cb268d1148808dba32ad163696d2f 274 SMART SM00342 18 101 2.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4521 882cb268d1148808dba32ad163696d2f 274 Pfam PF06445 GyrI-like small molecule binding domain 127 272 1.1E-29 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain Atu4521 882cb268d1148808dba32ad163696d2f 274 SUPERFAMILY SSF55136 129 272 8.72E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Atu4521 882cb268d1148808dba32ad163696d2f 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 52 97 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4521 882cb268d1148808dba32ad163696d2f 274 Gene3D G3DSA:1.10.10.60 55 118 2.3E-9 T 14-10-2018 Atu4521 882cb268d1148808dba32ad163696d2f 274 SUPERFAMILY SSF46689 3 52 9.86E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4521 882cb268d1148808dba32ad163696d2f 274 Gene3D G3DSA:3.20.80.10 128 273 7.5E-34 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 82 123 3.0E-17 T 14-10-2018 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 PIRSF PIRSF016262 9 230 3.0E-55 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 Hamap MF_00013 Octanoyltransferase [lipB]. 10 225 35.933 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 77 92 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 SUPERFAMILY SSF55681 14 226 2.15E-63 T 14-10-2018 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 41 222 1.1E-46 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 Gene3D G3DSA:3.30.930.10 11 222 1.3E-61 T 14-10-2018 Atu1556 d1f37935c5fc9a303ca8c4210a70aab6 233 Pfam PF03099 Biotin/lipoate A/B protein ligase family 72 178 1.8E-6 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 Gene3D G3DSA:1.10.287.130 226 328 6.9E-27 T 14-10-2018 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 330 1.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 9.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 9.9E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 SUPERFAMILY SSF55874 319 487 1.14E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 SUPERFAMILY SSF47384 250 331 5.69E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 484 1.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 SMART SM00388 261 330 1.5E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 Gene3D G3DSA:3.30.565.10 329 490 2.0E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1888 484276d4d9f5bb9b3b728677e2eb6346 511 SMART SM00387 376 489 4.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1645 25987c1db860cc2eef6b1a6f66c4a1ea 456 Pfam PF02470 MlaD protein 47 115 1.4E-9 T 14-10-2018 IPR003399 Mce/MlaD Atu1645 25987c1db860cc2eef6b1a6f66c4a1ea 456 SUPERFAMILY SSF58100 135 295 1.96E-5 T 14-10-2018 Atu0237 64cbcee72be8b7e533e8f6a5bbad8df1 152 SUPERFAMILY SSF46785 3 134 3.63E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0237 64cbcee72be8b7e533e8f6a5bbad8df1 152 Gene3D G3DSA:1.10.10.10 2 143 1.2E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0237 64cbcee72be8b7e533e8f6a5bbad8df1 152 Pfam PF02082 Transcriptional regulator 1 81 3.7E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 Gene3D G3DSA:1.10.10.10 125 224 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 SMART SM00448 1 112 4.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 Gene3D G3DSA:3.40.50.2300 1 121 3.4E-31 T 14-10-2018 Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 SMART SM00862 145 220 3.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 SUPERFAMILY SSF52172 1 167 1.07E-29 T 14-10-2018 IPR011006 CheY-like superfamily Atu5175 e2e558677b83bff7314c481efe7e5c1d 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.2E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 SUPERFAMILY SSF52540 5 243 1.46E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 Pfam PF00005 ABC transporter 21 162 2.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 Gene3D G3DSA:3.40.50.300 4 222 1.1E-65 T 14-10-2018 Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 SUPERFAMILY SSF50331 237 357 2.43E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 SMART SM00382 29 212 4.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 Pfam PF08402 TOBE domain 281 350 4.3E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 Gene3D G3DSA:2.40.50.940 223 350 6.1E-33 T 14-10-2018 Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3111 615b982cfaefcd59c4966e3210bb51cc 357 Gene3D G3DSA:2.40.50.140 287 342 6.1E-33 T 14-10-2018 Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 SUPERFAMILY SSF51735 6 265 5.0E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 263 1.0E-56 T 14-10-2018 Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 7.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 7.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 7.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 7.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 7.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 7.7E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 Gene3D G3DSA:3.40.50.720 2 267 2.7E-75 T 14-10-2018 Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4825 d3c49986f70366e5879d5dbc19e2b1da 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2013 801fce4a8340a3e82edec1e02008b8b0 564 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 263 1.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2013 801fce4a8340a3e82edec1e02008b8b0 564 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 373 559 1.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2013 801fce4a8340a3e82edec1e02008b8b0 564 Gene3D G3DSA:1.10.3720.10 13 275 7.3E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu2013 801fce4a8340a3e82edec1e02008b8b0 564 SUPERFAMILY SSF161098 293 550 1.03E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu2013 801fce4a8340a3e82edec1e02008b8b0 564 SUPERFAMILY SSF161098 12 275 2.71E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu2013 801fce4a8340a3e82edec1e02008b8b0 564 Gene3D G3DSA:1.10.3720.10 298 554 9.7E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu3986 7bc1babccd6624b23175d6a4cfaa32fb 205 SUPERFAMILY SSF53098 5 191 4.47E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu3986 7bc1babccd6624b23175d6a4cfaa32fb 205 Gene3D G3DSA:3.30.420.10 1 195 1.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu3986 7bc1babccd6624b23175d6a4cfaa32fb 205 Pfam PF00929 Exonuclease 5 182 6.9E-5 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu3986 7bc1babccd6624b23175d6a4cfaa32fb 205 SMART SM00479 3 196 2.0E-4 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 Gene3D G3DSA:3.50.50.60 4 332 1.1E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 451 2.9E-26 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 2.4E-48 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 3.2E-27 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.2E-27 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 3.2E-27 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 3.2E-27 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-27 T 14-10-2018 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 1.4E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 Gene3D G3DSA:3.50.50.60 156 275 1.1E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 PIRSF PIRSF000350 1 461 1.4E-72 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 SUPERFAMILY SSF51905 1 378 3.6E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 Gene3D G3DSA:3.30.390.30 345 461 3.1E-28 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu1661 20bd522d1687bd5853e78ccf62938ee8 467 SUPERFAMILY SSF55424 344 461 2.41E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu0835 9b37751534acf53946a18095ee8acea5 206 Pfam PF14497 Glutathione S-transferase, C-terminal domain 128 202 6.6E-5 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal Atu0835 9b37751534acf53946a18095ee8acea5 206 SUPERFAMILY SSF52833 1 83 1.6E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0835 9b37751534acf53946a18095ee8acea5 206 Gene3D G3DSA:1.20.1050.10 86 194 1.0E-42 T 14-10-2018 Atu0835 9b37751534acf53946a18095ee8acea5 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 1.9E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu0835 9b37751534acf53946a18095ee8acea5 206 Gene3D G3DSA:3.40.30.10 1 85 6.1E-25 T 14-10-2018 Atu0835 9b37751534acf53946a18095ee8acea5 206 SUPERFAMILY SSF47616 81 202 3.06E-19 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu1176 ae472d657532d7373f66035d4e83a1d7 178 Pfam PF03981 Ubiquinol-cytochrome C chaperone 35 172 3.4E-45 T 14-10-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 Atu1176 ae472d657532d7373f66035d4e83a1d7 178 PIRSF PIRSF032079 1 178 3.2E-83 T 14-10-2018 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related Atu3867 1fa8613cf5c3aaa7ce0572f73b689bc7 292 Pfam PF01841 Transglutaminase-like superfamily 133 245 1.9E-16 T 14-10-2018 IPR002931 Transglutaminase-like Atu3867 1fa8613cf5c3aaa7ce0572f73b689bc7 292 SMART SM00460 176 247 2.6E-10 T 14-10-2018 IPR002931 Transglutaminase-like Atu3867 1fa8613cf5c3aaa7ce0572f73b689bc7 292 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 82 1.0E-14 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Atu3867 1fa8613cf5c3aaa7ce0572f73b689bc7 292 SUPERFAMILY SSF54001 100 286 7.99E-43 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu3867 1fa8613cf5c3aaa7ce0572f73b689bc7 292 Gene3D G3DSA:3.10.620.30 98 282 1.3E-42 T 14-10-2018 Atu0744 fe1765f70574384c6ff0d716575ec541 120 Pfam PF12680 SnoaL-like domain 9 108 2.6E-9 T 14-10-2018 IPR037401 SnoaL-like domain Atu0744 fe1765f70574384c6ff0d716575ec541 120 Gene3D G3DSA:3.10.450.50 1 120 1.5E-40 T 14-10-2018 Atu0744 fe1765f70574384c6ff0d716575ec541 120 SUPERFAMILY SSF54427 1 116 8.13E-35 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu2814 520ada0c35ba0e8d529c75193fd3186c 336 Gene3D G3DSA:3.40.50.720 151 285 1.3E-83 T 14-10-2018 Atu2814 520ada0c35ba0e8d529c75193fd3186c 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 129 2.8E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu2814 520ada0c35ba0e8d529c75193fd3186c 336 SUPERFAMILY SSF51735 132 300 1.28E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2814 520ada0c35ba0e8d529c75193fd3186c 336 SUPERFAMILY SSF50129 1 168 9.59E-46 T 14-10-2018 IPR011032 GroES-like superfamily Atu2814 520ada0c35ba0e8d529c75193fd3186c 336 Gene3D G3DSA:3.90.180.10 14 316 1.3E-83 T 14-10-2018 Atu2814 520ada0c35ba0e8d529c75193fd3186c 336 Pfam PF00107 Zinc-binding dehydrogenase 169 295 5.5E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu1058 6df78c64457f452d5aac20cd5fba01bd 107 SUPERFAMILY SSF103481 7 105 9.55E-9 T 14-10-2018 Atu1058 6df78c64457f452d5aac20cd5fba01bd 107 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 2 107 1.7E-30 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 Atu1058 6df78c64457f452d5aac20cd5fba01bd 107 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 24.972 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 Atu2091 68b8d129b76705d6a0cfb0d987f1a851 269 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 106 258 3.3E-34 T 14-10-2018 IPR000160 GGDEF domain Atu2091 68b8d129b76705d6a0cfb0d987f1a851 269 SUPERFAMILY SSF55073 112 258 5.89E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2091 68b8d129b76705d6a0cfb0d987f1a851 269 SMART SM00267 96 259 1.1E-41 T 14-10-2018 IPR000160 GGDEF domain Atu2091 68b8d129b76705d6a0cfb0d987f1a851 269 Pfam PF00990 Diguanylate cyclase, GGDEF domain 107 255 1.9E-30 T 14-10-2018 IPR000160 GGDEF domain Atu2091 68b8d129b76705d6a0cfb0d987f1a851 269 Gene3D G3DSA:3.30.70.270 101 264 7.7E-45 T 14-10-2018 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 545 1.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1115 ed9feabca2bf3869218ec705cf75d148 553 Gene3D G3DSA:1.10.287.130 307 392 2.4E-13 T 14-10-2018 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 545 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 1.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 SMART SM00387 440 548 8.8E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1115 ed9feabca2bf3869218ec705cf75d148 553 Gene3D G3DSA:3.30.565.10 400 552 2.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1115 ed9feabca2bf3869218ec705cf75d148 553 SUPERFAMILY SSF55874 403 545 4.98E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1115 ed9feabca2bf3869218ec705cf75d148 553 Pfam PF00512 His Kinase A (phospho-acceptor) domain 330 386 1.6E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 SUPERFAMILY SSF47384 324 390 5.49E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1115 ed9feabca2bf3869218ec705cf75d148 553 SMART SM00388 330 398 5.7E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 226 242 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 Gene3D G3DSA:3.90.1150.10 14 398 1.3E-185 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 SUPERFAMILY SSF53383 5 428 6.99E-187 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 11 427 53.416 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 Gene3D G3DSA:3.40.640.10 41 292 1.3E-185 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 PIRSF PIRSF000412 3 429 1.0E-173 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu1165 6c2c8ea0a956293eaafe497726635ce9 429 Pfam PF00464 Serine hydroxymethyltransferase 12 389 1.5E-182 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 Gene3D G3DSA:1.10.10.10 7 80 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 2.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 SMART SM00345 21 79 1.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 Pfam PF07729 FCD domain 89 214 7.0E-19 T 14-10-2018 IPR011711 GntR, C-terminal Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 Gene3D G3DSA:1.20.120.530 82 225 3.7E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 SUPERFAMILY SSF48008 84 219 6.8E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 SUPERFAMILY SSF46785 13 83 5.44E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3294 be1eabc3bf3c0c0d2ed7371c23144dbe 236 SMART SM00895 89 215 2.4E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu4142 12ead7573d4608ac9bb4465e50faad66 186 SUPERFAMILY SSF52317 7 175 1.1E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4142 12ead7573d4608ac9bb4465e50faad66 186 Pfam PF01965 DJ-1/PfpI family 8 175 1.5E-51 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu4142 12ead7573d4608ac9bb4465e50faad66 186 Gene3D G3DSA:3.40.50.880 2 185 8.0E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4142 12ead7573d4608ac9bb4465e50faad66 186 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 8 175 8.9E-54 T 14-10-2018 IPR006286 Deglycase PfpI Atu2079 5af20c6a7e7e8d7b18a42ea55b0fa614 303 Pfam PF00892 EamA-like transporter family 6 137 1.6E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2079 5af20c6a7e7e8d7b18a42ea55b0fa614 303 Pfam PF00892 EamA-like transporter family 149 285 3.3E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2079 5af20c6a7e7e8d7b18a42ea55b0fa614 303 SUPERFAMILY SSF103481 192 286 1.18E-11 T 14-10-2018 Atu2079 5af20c6a7e7e8d7b18a42ea55b0fa614 303 SUPERFAMILY SSF103481 38 140 1.57E-12 T 14-10-2018 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 Gene3D G3DSA:3.40.50.2300 169 298 8.8E-72 T 14-10-2018 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 SUPERFAMILY SSF53822 72 337 1.12E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 Pfam PF13377 Periplasmic binding protein-like domain 177 336 4.8E-34 T 14-10-2018 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 SMART SM00354 11 82 1.8E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 Gene3D G3DSA:3.40.50.2300 66 313 8.8E-72 T 14-10-2018 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 Gene3D G3DSA:1.10.260.40 4 65 3.7E-16 T 14-10-2018 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 58 2.7E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5393 c9a9694b12807f3e8db4870a5577b7d5 341 SUPERFAMILY SSF47413 11 70 1.03E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 534 45.048 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Gene3D G3DSA:1.20.1640.10 368 532 7.9E-13 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 547 831 28.275 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 SUPERFAMILY SSF82866 271 529 1.57E-44 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Gene3D G3DSA:1.20.1640.10 665 844 3.7E-13 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 47 520 1.8E-147 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Gene3D G3DSA:3.30.70.3400 161 354 1.4E-65 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Pfam PF02355 Protein export membrane protein 355 519 6.1E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Pfam PF02355 Protein export membrane protein 651 828 3.5E-66 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Gene3D G3DSA:3.30.1360.200 214 352 1.4E-65 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 575 820 9.7E-83 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Pfam PF07549 SecD/SecF GG Motif 44 62 0.0023 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Pfam PF07549 SecD/SecF GG Motif 571 595 2.2E-9 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Gene3D G3DSA:3.30.70.1430 586 608 7.9E-13 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 Gene3D G3DSA:1.20.1640.10 533 585 7.9E-13 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 SUPERFAMILY SSF82866 612 828 3.27E-40 T 14-10-2018 Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 627 817 3.8E-58 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 284 513 2.7E-81 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 PRINTS PR01755 Bacterial translocase SecF protein signature 574 589 3.8E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 PRINTS PR01755 Bacterial translocase SecF protein signature 736 754 3.8E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 PRINTS PR01755 Bacterial translocase SecF protein signature 688 702 3.8E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atu1562 2b1f32c83455f7ecea2425798e3e6da1 857 PRINTS PR01755 Bacterial translocase SecF protein signature 768 783 3.8E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Atu4409 751ae0149dd03f49f7319ea8cb086e90 163 Gene3D G3DSA:1.10.1130.10 70 137 7.7E-28 T 14-10-2018 Atu4409 751ae0149dd03f49f7319ea8cb086e90 163 PIRSF PIRSF006105 10 163 1.2E-50 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Atu4409 751ae0149dd03f49f7319ea8cb086e90 163 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 30 151 3.2E-47 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Atu4409 751ae0149dd03f49f7319ea8cb086e90 163 SUPERFAMILY SSF48695 45 154 8.69E-45 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily Atu1622 d677394a64cef92dace068e21dc7d19b 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 97 242 8.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1622 d677394a64cef92dace068e21dc7d19b 710 SUPERFAMILY SSF55874 72 274 1.57E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1622 d677394a64cef92dace068e21dc7d19b 710 Gene3D G3DSA:3.30.230.10 297 470 1.7E-47 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1622 d677394a64cef92dace068e21dc7d19b 710 SMART SM00433 101 703 1.3E-292 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1622 d677394a64cef92dace068e21dc7d19b 710 ProSitePatterns PS00177 DNA topoisomerase II signature. 496 504 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 345 358 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 640 656 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 101 116 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 136 149 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 180 194 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 578 595 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 598 610 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR00418 DNA topoisomerase II family signature 494 508 5.8E-63 T 14-10-2018 Atu1622 d677394a64cef92dace068e21dc7d19b 710 Gene3D G3DSA:3.40.50.670 473 710 3.8E-89 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1622 d677394a64cef92dace068e21dc7d19b 710 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 69 707 42.454 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 Pfam PF01751 Toprim domain 493 592 1.5E-16 T 14-10-2018 IPR006171 TOPRIM domain Atu1622 d677394a64cef92dace068e21dc7d19b 710 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 71 702 3.5E-224 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 Gene3D G3DSA:3.30.565.10 68 277 2.2E-74 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1622 d677394a64cef92dace068e21dc7d19b 710 SUPERFAMILY SSF54211 297 466 8.35E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu1622 d677394a64cef92dace068e21dc7d19b 710 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 636 699 8.7E-25 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 Pfam PF00204 DNA gyrase B 297 465 2.0E-43 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Atu1622 d677394a64cef92dace068e21dc7d19b 710 SUPERFAMILY SSF56719 468 700 2.54E-76 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR01159 DNA gyrase subunit B signature 296 318 5.6E-16 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR01159 DNA gyrase subunit B signature 661 673 5.6E-16 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR01159 DNA gyrase subunit B signature 544 553 5.6E-16 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR01159 DNA gyrase subunit B signature 72 82 5.6E-16 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR01159 DNA gyrase subunit B signature 435 449 5.6E-16 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 PRINTS PR01159 DNA gyrase subunit B signature 449 469 5.6E-16 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Atu1622 d677394a64cef92dace068e21dc7d19b 710 SMART SM00387 97 243 1.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1379 046dfdaa4728e0eeaa6093298a5c0642 277 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 217 243 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Atu1379 046dfdaa4728e0eeaa6093298a5c0642 277 Pfam PF01148 Cytidylyltransferase family 6 255 1.1E-54 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 118 1.3E-11 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 Pfam PF00361 Proton-conducting membrane transporter 131 409 1.5E-65 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 32 782 7.6E-290 T 14-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 108 128 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 155 176 5.2E-39 T 14-10-2018 Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 824 945 3.9E-32 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Atu8131 c40674e78d18ba2024d0354f4b3dfaab 972 Pfam PF13244 Domain of unknown function (DUF4040) 621 686 6.2E-21 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 SMART SM00490 258 339 1.9E-29 T 14-10-2018 IPR001650 Helicase, C-terminal Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 Gene3D G3DSA:3.40.50.300 1 209 8.1E-67 T 14-10-2018 Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 Pfam PF00271 Helicase conserved C-terminal domain 235 339 5.1E-26 T 14-10-2018 IPR001650 Helicase, C-terminal Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 Pfam PF03880 DbpA RNA binding domain 470 538 1.8E-14 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 Pfam PF00270 DEAD/DEAH box helicase 24 196 1.5E-42 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 SUPERFAMILY SSF52540 75 349 1.16E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 SMART SM00487 19 222 1.8E-50 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu4171 ea3e1f6fd6269be00d588795743c88ae 615 Gene3D G3DSA:3.40.50.300 221 426 7.9E-42 T 14-10-2018 Atu0990 681baf4dc5ee048130bdeaab36feb872 262 Gene3D G3DSA:3.40.50.720 2 261 3.4E-64 T 14-10-2018 Atu0990 681baf4dc5ee048130bdeaab36feb872 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0990 681baf4dc5ee048130bdeaab36feb872 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0990 681baf4dc5ee048130bdeaab36feb872 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0990 681baf4dc5ee048130bdeaab36feb872 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0990 681baf4dc5ee048130bdeaab36feb872 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0990 681baf4dc5ee048130bdeaab36feb872 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0990 681baf4dc5ee048130bdeaab36feb872 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 258 3.5E-43 T 14-10-2018 Atu0990 681baf4dc5ee048130bdeaab36feb872 262 SUPERFAMILY SSF51735 7 258 4.59E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1828 2f5938791bd3212280a401b720557932 417 Pfam PF00579 tRNA synthetases class I (W and Y) 34 328 8.6E-75 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1828 2f5938791bd3212280a401b720557932 417 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 414 1.6E-114 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atu1828 2f5938791bd3212280a401b720557932 417 Gene3D G3DSA:1.10.240.10 229 321 8.2E-30 T 14-10-2018 Atu1828 2f5938791bd3212280a401b720557932 417 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 416 42.817 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Atu1828 2f5938791bd3212280a401b720557932 417 Gene3D G3DSA:3.10.290.10 322 416 4.9E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu1828 2f5938791bd3212280a401b720557932 417 SUPERFAMILY SSF55174 311 414 2.88E-17 T 14-10-2018 Atu1828 2f5938791bd3212280a401b720557932 417 SUPERFAMILY SSF52374 7 327 8.13E-100 T 14-10-2018 Atu1828 2f5938791bd3212280a401b720557932 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 1.9E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atu1828 2f5938791bd3212280a401b720557932 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 1.9E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atu1828 2f5938791bd3212280a401b720557932 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 1.9E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atu1828 2f5938791bd3212280a401b720557932 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 1.9E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Atu1828 2f5938791bd3212280a401b720557932 417 Gene3D G3DSA:3.40.50.620 1 228 2.9E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0572 1e1bdbd91fb43151d16c206f27c19d69 147 Gene3D G3DSA:1.10.530.10 2 142 2.6E-9 T 14-10-2018 Atu0572 1e1bdbd91fb43151d16c206f27c19d69 147 Pfam PF01464 Transglycosylase SLT domain 33 122 2.3E-8 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu0572 1e1bdbd91fb43151d16c206f27c19d69 147 SUPERFAMILY SSF53955 1 130 1.72E-17 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu2107 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF00665 Integrase core domain 346 461 1.2E-18 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu2107 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF13276 HTH-like domain 273 323 1.2E-15 T 14-10-2018 IPR025948 HTH-like domain Atu2107 cc598c219b6083e4bc32f23139aa7169 512 SUPERFAMILY SSF53098 340 503 1.73E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu2107 cc598c219b6083e4bc32f23139aa7169 512 SUPERFAMILY SSF46689 117 212 3.76E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2107 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF01527 Transposase 118 191 2.1E-5 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu4009 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF00665 Integrase core domain 346 461 1.2E-18 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu4009 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF13276 HTH-like domain 273 323 1.2E-15 T 14-10-2018 IPR025948 HTH-like domain Atu4009 cc598c219b6083e4bc32f23139aa7169 512 SUPERFAMILY SSF53098 340 503 1.73E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu4009 cc598c219b6083e4bc32f23139aa7169 512 SUPERFAMILY SSF46689 117 212 3.76E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4009 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF01527 Transposase 118 191 2.1E-5 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu5353 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF00665 Integrase core domain 346 461 1.2E-18 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu5353 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF13276 HTH-like domain 273 323 1.2E-15 T 14-10-2018 IPR025948 HTH-like domain Atu5353 cc598c219b6083e4bc32f23139aa7169 512 SUPERFAMILY SSF53098 340 503 1.73E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu5353 cc598c219b6083e4bc32f23139aa7169 512 SUPERFAMILY SSF46689 117 212 3.76E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5353 cc598c219b6083e4bc32f23139aa7169 512 Pfam PF01527 Transposase 118 191 2.1E-5 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu2113 00b47e48badaedc9b9290df73447e21f 259 Gene3D G3DSA:3.40.80.10 12 169 5.0E-47 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atu2113 00b47e48badaedc9b9290df73447e21f 259 Gene3D G3DSA:1.10.101.10 182 251 4.3E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu2113 00b47e48badaedc9b9290df73447e21f 259 Pfam PF01471 Putative peptidoglycan binding domain 191 246 4.9E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu2113 00b47e48badaedc9b9290df73447e21f 259 SUPERFAMILY SSF55846 18 173 1.7E-50 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atu2113 00b47e48badaedc9b9290df73447e21f 259 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 157 2.2E-29 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atu2113 00b47e48badaedc9b9290df73447e21f 259 SUPERFAMILY SSF47090 186 251 2.35E-16 T 14-10-2018 IPR036365 PGBD-like superfamily Atu2113 00b47e48badaedc9b9290df73447e21f 259 SMART SM00644 22 157 1.4E-33 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Atu2813 f8b43ff44eac972d545832f885f38091 377 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 196 356 9.5E-21 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Atu2813 f8b43ff44eac972d545832f885f38091 377 Gene3D G3DSA:3.40.50.720 2 239 2.2E-24 T 14-10-2018 Atu2813 f8b43ff44eac972d545832f885f38091 377 SUPERFAMILY SSF48179 246 371 9.52E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2813 f8b43ff44eac972d545832f885f38091 377 Gene3D G3DSA:1.10.1040.10 245 376 3.7E-24 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu2813 f8b43ff44eac972d545832f885f38091 377 SUPERFAMILY SSF51735 5 238 2.6E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 422 4.8E-88 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 Gene3D G3DSA:3.10.105.10 256 476 4.6E-124 T 14-10-2018 Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 SUPERFAMILY SSF53850 25 501 9.41E-132 T 14-10-2018 Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 Gene3D G3DSA:3.40.190.10 181 486 4.6E-124 T 14-10-2018 Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 94 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 Gene3D G3DSA:3.90.76.10 33 180 4.6E-124 T 14-10-2018 Atu4719 e8db5d52a636f24dd9c3e45e9a374b8b 502 PIRSF PIRSF002741 17 499 2.0E-106 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3788 c06316169888423de14592d68fe11229 188 Pfam PF02669 K+-transporting ATPase, c chain 6 184 3.1E-74 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atu3788 c06316169888423de14592d68fe11229 188 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 185 1.9E-68 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atu3788 c06316169888423de14592d68fe11229 188 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 186 36.55 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atu3788 c06316169888423de14592d68fe11229 188 PIRSF PIRSF001296 1 188 3.5E-77 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Atu0413 3a13baf218ae2d9645fa6aa40a7cd745 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Atu0413 3a13baf218ae2d9645fa6aa40a7cd745 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 9.1E-23 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Gene3D G3DSA:2.40.160.50 436 774 1.4E-96 T 14-10-2018 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Gene3D G3DSA:3.10.20.310 278 354 1.3E-10 T 14-10-2018 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Pfam PF07244 Surface antigen variable number repeat 187 274 1.1E-16 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Pfam PF07244 Surface antigen variable number repeat 108 183 1.3E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Pfam PF07244 Surface antigen variable number repeat 360 430 8.0E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Pfam PF07244 Surface antigen variable number repeat 39 104 2.0E-6 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Pfam PF07244 Surface antigen variable number repeat 292 356 9.7E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Gene3D G3DSA:3.10.20.310 360 435 1.0E-22 T 14-10-2018 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 39 774 3.1E-233 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 11 774 24.04 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Gene3D G3DSA:3.10.20.310 186 277 5.7E-23 T 14-10-2018 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Gene3D G3DSA:3.10.20.310 32 105 1.5E-18 T 14-10-2018 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Pfam PF01103 Surface antigen 459 774 2.8E-87 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 PIRSF PIRSF006076 2 774 1.7E-241 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Atu1381 0e4dafd7dcf6afdc4ed9e591830c572d 774 Gene3D G3DSA:3.10.20.310 107 183 9.4E-12 T 14-10-2018 Atu4581 e12027c898616e6c197393b8e3ba1ae6 176 SMART SM00903 26 171 4.5E-36 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu4581 e12027c898616e6c197393b8e3ba1ae6 176 SUPERFAMILY SSF50475 21 170 1.72E-37 T 14-10-2018 Atu4581 e12027c898616e6c197393b8e3ba1ae6 176 Pfam PF01613 Flavin reductase like domain 26 172 1.5E-31 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu4581 e12027c898616e6c197393b8e3ba1ae6 176 Gene3D G3DSA:2.30.110.10 5 175 8.0E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 101 174 8.0E-20 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 98 176 1.6E-29 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 Gene3D G3DSA:2.30.330.10 92 179 7.3E-28 T 14-10-2018 IPR036429 SpoA-like superfamily Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 117 2.1E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 PRINTS PR00956 Flagellar motor switch protein FliN signature 147 162 2.1E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 PRINTS PR00956 Flagellar motor switch protein FliN signature 134 147 2.1E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 PRINTS PR00956 Flagellar motor switch protein FliN signature 118 134 2.1E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Atu0562 e6ce9a033871ecd2fabead53b04f0249 179 SUPERFAMILY SSF101801 97 177 3.79E-18 T 14-10-2018 IPR036429 SpoA-like superfamily Atu3303 809fb35ee3bb354db929c0a65153291d 384 SUPERFAMILY SSF55031 182 291 8.37E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3303 809fb35ee3bb354db929c0a65153291d 384 Gene3D G3DSA:3.30.70.360 179 294 1.0E-89 T 14-10-2018 Atu3303 809fb35ee3bb354db929c0a65153291d 384 PIRSF PIRSF005962 2 383 9.6E-89 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3303 809fb35ee3bb354db929c0a65153291d 384 Pfam PF01546 Peptidase family M20/M25/M40 70 379 4.0E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu3303 809fb35ee3bb354db929c0a65153291d 384 Pfam PF07687 Peptidase dimerisation domain 183 281 1.1E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu3303 809fb35ee3bb354db929c0a65153291d 384 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 366 7.7E-61 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3303 809fb35ee3bb354db929c0a65153291d 384 SUPERFAMILY SSF53187 9 380 1.77E-62 T 14-10-2018 Atu3303 809fb35ee3bb354db929c0a65153291d 384 Gene3D G3DSA:3.40.630.10 11 364 1.0E-89 T 14-10-2018 Atu1890 626748ca342b416f0cf41361b977fd61 344 Gene3D G3DSA:1.10.1610.10 20 326 2.1E-103 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Atu1890 626748ca342b416f0cf41361b977fd61 344 Gene3D G3DSA:3.40.50.10210 63 317 2.1E-103 T 14-10-2018 Atu1890 626748ca342b416f0cf41361b977fd61 344 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 20 336 33.922 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Atu1890 626748ca342b416f0cf41361b977fd61 344 Pfam PF02277 Phosphoribosyltransferase 20 334 4.7E-107 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Atu1890 626748ca342b416f0cf41361b977fd61 344 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 22 334 7.0E-111 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Atu1890 626748ca342b416f0cf41361b977fd61 344 SUPERFAMILY SSF52733 13 335 6.67E-107 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Atu5546 5c84a2602e06bcccf743b37688b55b54 317 SUPERFAMILY SSF53850 109 313 7.6E-35 T 14-10-2018 Atu5546 5c84a2602e06bcccf743b37688b55b54 317 Gene3D G3DSA:3.40.190.290 111 309 5.0E-54 T 14-10-2018 Atu5546 5c84a2602e06bcccf743b37688b55b54 317 SUPERFAMILY SSF46785 17 121 2.37E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5546 5c84a2602e06bcccf743b37688b55b54 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 82 1.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5546 5c84a2602e06bcccf743b37688b55b54 317 Gene3D G3DSA:1.10.10.10 22 108 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5546 5c84a2602e06bcccf743b37688b55b54 317 Pfam PF03466 LysR substrate binding domain 107 311 4.8E-35 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0366 067d821e9a035b8c172b51514d8c4570 170 SUPERFAMILY SSF56420 1 164 7.59E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily Atu0366 067d821e9a035b8c172b51514d8c4570 170 Gene3D G3DSA:3.90.45.10 1 170 2.6E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily Atu0366 067d821e9a035b8c172b51514d8c4570 170 PRINTS PR01576 Peptide deformylase signature 104 122 5.2E-37 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 PRINTS PR01576 Peptide deformylase signature 92 103 5.2E-37 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 PRINTS PR01576 Peptide deformylase signature 123 152 5.2E-37 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 PRINTS PR01576 Peptide deformylase signature 33 62 5.2E-37 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 1.7E-54 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 Pfam PF01327 Polypeptide deformylase 4 155 4.5E-53 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 PIRSF PIRSF004749 1 169 4.8E-57 T 14-10-2018 IPR023635 Peptide deformylase Atu0366 067d821e9a035b8c172b51514d8c4570 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 32.418 T 14-10-2018 IPR023635 Peptide deformylase Atu4571 4e4f4a760e8ee00e6fee2324a3ef72e3 287 Gene3D G3DSA:1.10.3720.10 20 273 1.9E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu4571 4e4f4a760e8ee00e6fee2324a3ef72e3 287 SUPERFAMILY SSF161098 27 282 4.11E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu4571 4e4f4a760e8ee00e6fee2324a3ef72e3 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 274 4.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0040 ae7d5e99705111477820638fbec258e2 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 234 1.0E-76 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Atu0040 ae7d5e99705111477820638fbec258e2 247 SUPERFAMILY SSF51366 1 239 3.53E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu0040 ae7d5e99705111477820638fbec258e2 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 34.879 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Atu0040 ae7d5e99705111477820638fbec258e2 247 Gene3D G3DSA:3.20.20.70 2 246 2.6E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0040 ae7d5e99705111477820638fbec258e2 247 Pfam PF00977 Histidine biosynthesis protein 3 230 2.8E-75 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Atu2531 354401f7ecf82375057703d0bb83a2c1 179 Gene3D G3DSA:2.30.110.10 13 177 1.0E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu2531 354401f7ecf82375057703d0bb83a2c1 179 SMART SM00903 24 171 1.7E-47 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu2531 354401f7ecf82375057703d0bb83a2c1 179 SUPERFAMILY SSF50475 19 172 1.13E-42 T 14-10-2018 Atu2531 354401f7ecf82375057703d0bb83a2c1 179 Pfam PF01613 Flavin reductase like domain 24 171 9.9E-32 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu0260 ed1478d5a4db7c51f32bb45fc7b2b0d4 333 Pfam PF00248 Aldo/keto reductase family 15 311 2.3E-77 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu0260 ed1478d5a4db7c51f32bb45fc7b2b0d4 333 Gene3D G3DSA:3.20.20.100 1 333 1.5E-117 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu0260 ed1478d5a4db7c51f32bb45fc7b2b0d4 333 SUPERFAMILY SSF51430 1 314 2.1E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3985 c47b924710fb3a32db65bb8c706e833f 260 SUPERFAMILY SSF51735 6 154 3.06E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3985 c47b924710fb3a32db65bb8c706e833f 260 SUPERFAMILY SSF48179 163 258 4.59E-8 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu3985 c47b924710fb3a32db65bb8c706e833f 260 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 98 2.9E-13 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Atu3985 c47b924710fb3a32db65bb8c706e833f 260 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 258 7.5E-9 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atu3985 c47b924710fb3a32db65bb8c706e833f 260 Gene3D G3DSA:1.10.3730.10 156 260 1.5E-5 T 14-10-2018 Atu3985 c47b924710fb3a32db65bb8c706e833f 260 Gene3D G3DSA:3.40.50.720 6 153 1.3E-23 T 14-10-2018 Atu3985 c47b924710fb3a32db65bb8c706e833f 260 PIRSF PIRSF000193 4 260 2.0E-62 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Atu1389 c877734a8321758a6ca522909380bab0 223 Gene3D G3DSA:1.10.3720.10 3 212 9.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu1389 c877734a8321758a6ca522909380bab0 223 SUPERFAMILY SSF161098 15 202 1.7E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu1389 c877734a8321758a6ca522909380bab0 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 206 5.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1389 c877734a8321758a6ca522909380bab0 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 5.8E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 2.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 2.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 2.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 2.0E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 105 4.2E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 Gene3D G3DSA:3.30.360.10 153 317 3.2E-151 T 14-10-2018 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 SMART SM00846 3 154 3.4E-92 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 SUPERFAMILY SSF55347 154 316 2.71E-73 T 14-10-2018 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 PIRSF PIRSF000149 1 336 2.3E-138 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 Gene3D G3DSA:3.40.50.720 4 327 3.2E-151 T 14-10-2018 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 SUPERFAMILY SSF51735 1 182 5.48E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 5.2E-67 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3737 02e54aafc1e2265a584d1bc5aab5516b 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.2E-129 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu0883 147f6f6b0e66970d628ad7da63ba3155 60 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 11 60 2.6E-21 T 14-10-2018 IPR012667 Cobalt transporter subunit CbtB, putative Atu0883 147f6f6b0e66970d628ad7da63ba3155 60 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 1 60 1.7E-30 T 14-10-2018 IPR012667 Cobalt transporter subunit CbtB, putative Atu3330 d2681cafea00aac69c82fcaf970d3336 605 Gene3D G3DSA:1.10.287.950 297 592 1.4E-72 T 14-10-2018 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 SUPERFAMILY SSF58104 310 594 3.53E-64 T 14-10-2018 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 SMART SM00304 290 342 22.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 SMART SM00304 208 261 0.0013 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 518 547 4.6E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 393 4.6E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 468 4.6E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 4.6E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 404 557 1.6E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 SMART SM00283 343 590 3.4E-89 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 Gene3D G3DSA:1.10.8.500 208 259 6.0E-10 T 14-10-2018 Atu3330 d2681cafea00aac69c82fcaf970d3336 605 SUPERFAMILY SSF158472 209 255 6.28E-7 T 14-10-2018 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 Gene3D G3DSA:3.30.300.20 17 107 2.2E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 Gene3D G3DSA:3.30.1140.32 108 208 4.2E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 SMART SM00322 60 125 2.6E-10 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 Pfam PF07650 KH domain 38 110 1.1E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.8E-97 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 SUPERFAMILY SSF54814 2 106 4.45E-40 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.814 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-39 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1940 93f7dfb7c55f008d953fb06cb6e46879 243 SUPERFAMILY SSF54821 108 206 6.41E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu0117 1ad3874d77649c38398b8da77767dc66 153 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 12 144 4.9E-18 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 Gene3D G3DSA:3.30.1330.30 17 119 1.4E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 Gene3D G3DSA:3.40.1280.10 123 282 3.0E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 SUPERFAMILY SSF55315 18 119 5.89E-23 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 Pfam PF00588 SpoU rRNA Methylase family 133 273 2.0E-36 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 47 118 4.4E-6 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 SUPERFAMILY SSF75217 119 280 3.27E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu0341 9f3e4c670a54ebd9aaf352878096d330 286 SMART SM00967 46 122 2.8E-10 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Atu0393 69950b8258959d93fb15c95b66917785 273 SUPERFAMILY SSF161098 4 273 3.92E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu0393 69950b8258959d93fb15c95b66917785 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 263 1.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0393 69950b8258959d93fb15c95b66917785 273 Gene3D G3DSA:1.10.3720.10 2 265 4.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily Atu4291 43a7af4cd531abbd4abd95e07615a075 302 Pfam PF03466 LysR substrate binding domain 92 297 2.6E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4291 43a7af4cd531abbd4abd95e07615a075 302 Gene3D G3DSA:3.40.190.10 93 295 1.3E-68 T 14-10-2018 Atu4291 43a7af4cd531abbd4abd95e07615a075 302 Gene3D G3DSA:1.10.10.10 2 86 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4291 43a7af4cd531abbd4abd95e07615a075 302 SUPERFAMILY SSF53850 92 299 1.04E-42 T 14-10-2018 Atu4291 43a7af4cd531abbd4abd95e07615a075 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4291 43a7af4cd531abbd4abd95e07615a075 302 SUPERFAMILY SSF46785 6 113 1.91E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4291 43a7af4cd531abbd4abd95e07615a075 302 Gene3D G3DSA:3.40.190.10 165 268 1.3E-68 T 14-10-2018 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 SMART SM00421 149 206 4.6E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 Gene3D G3DSA:1.10.10.10 145 207 7.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 Pfam PF00072 Response regulator receiver domain 16 125 3.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 SMART SM00448 14 125 2.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 SUPERFAMILY SSF52172 16 174 8.97E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 5.6E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 Gene3D G3DSA:3.40.50.2300 10 141 3.9E-44 T 14-10-2018 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.9E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.9E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4774 29f46d0200c07332f3482a9f5474fe9f 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.9E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3437 f68c1517efaba524047564b64d68167f 311 Gene3D G3DSA:3.40.50.300 1 311 1.1E-105 T 14-10-2018 Atu3437 f68c1517efaba524047564b64d68167f 311 SMART SM00382 32 224 3.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3437 f68c1517efaba524047564b64d68167f 311 SUPERFAMILY SSF52540 3 246 1.77E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3437 f68c1517efaba524047564b64d68167f 311 Pfam PF00005 ABC transporter 24 174 2.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3437 f68c1517efaba524047564b64d68167f 311 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3437 f68c1517efaba524047564b64d68167f 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 226 289 7.9E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3437 f68c1517efaba524047564b64d68167f 311 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 224 308 2.4E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu8160 1f1cc2e09ac5cb946ba1d0e1f15208dc 188 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 95 153 1.4E-17 T 14-10-2018 IPR018637 Domain of unknown function DUF2059 Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 SUPERFAMILY SSF53187 21 394 1.46E-84 T 14-10-2018 Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 SUPERFAMILY SSF55031 195 307 9.03E-32 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 Gene3D G3DSA:3.40.630.10 26 378 4.2E-138 T 14-10-2018 Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 26 380 1.1E-105 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 PIRSF PIRSF005962 12 395 8.1E-127 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 Pfam PF07687 Peptidase dimerisation domain 197 292 1.0E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 Gene3D G3DSA:3.30.70.360 192 306 4.2E-138 T 14-10-2018 Atu3419 aed21bbbc07d1ade0f838941be509fe2 395 Pfam PF01546 Peptidase family M20/M25/M40 84 391 8.7E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu3376 784edb6bfe291c05723a8b0e435c640c 282 SUPERFAMILY SSF56601 4 280 3.58E-42 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu3376 784edb6bfe291c05723a8b0e435c640c 282 Pfam PF13354 Beta-lactamase enzyme family 27 242 7.1E-47 T 14-10-2018 Atu3376 784edb6bfe291c05723a8b0e435c640c 282 Gene3D G3DSA:3.40.710.10 2 282 2.2E-47 T 14-10-2018 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 Pfam PF17392 Urocanase C-terminal domain 351 545 1.1E-92 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 Gene3D G3DSA:3.40.1770.10 16 541 2.9E-258 T 14-10-2018 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 PIRSF PIRSF001423 2 556 7.8E-295 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 Pfam PF17391 Urocanase N-terminal domain 11 137 3.1E-61 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 SUPERFAMILY SSF111326 8 553 3.53E-261 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 552 5.7E-294 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 Hamap MF_00577 Urocanate hydratase [hutU]. 2 555 50.468 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 Pfam PF01175 Urocanase Rossmann-like domain 140 348 8.2E-85 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3931 f346f422f9fb8f3940efb5e7d72ac64f 557 Gene3D G3DSA:3.40.50.10730 141 348 2.9E-258 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3621 9170e1746bbc81053fa7295a0238c788 634 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 401 618 8.2E-115 T 14-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Atu3621 9170e1746bbc81053fa7295a0238c788 634 SMART SM00327 412 621 3.6E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A Atu3621 9170e1746bbc81053fa7295a0238c788 634 Pfam PF06213 Cobalamin biosynthesis protein CobT 17 287 3.2E-92 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Atu3621 9170e1746bbc81053fa7295a0238c788 634 SUPERFAMILY SSF53300 415 608 3.97E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atu3621 9170e1746bbc81053fa7295a0238c788 634 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 19 619 0.0 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Atu3621 9170e1746bbc81053fa7295a0238c788 634 Gene3D G3DSA:3.40.50.410 413 624 1.5E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atu3621 9170e1746bbc81053fa7295a0238c788 634 PIRSF PIRSF031715 5 627 2.9E-294 T 14-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 Gene3D G3DSA:3.40.47.10 125 397 5.8E-135 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 Pfam PF02803 Thiolase, C-terminal domain 280 401 3.8E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 Gene3D G3DSA:3.40.47.10 6 299 5.8E-135 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 Pfam PF00108 Thiolase, N-terminal domain 4 229 7.4E-48 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 SUPERFAMILY SSF53901 1 273 1.14E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 400 6.9E-123 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 SUPERFAMILY SSF53901 280 401 8.28E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0502 ee7fb90cc8ea9462d4dd4a33fe839c16 402 PIRSF PIRSF000429 1 402 1.1E-117 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu3949 03950b1efcf356912b9bb65d6e7d0418 314 SUPERFAMILY SSF51735 1 302 1.74E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3949 03950b1efcf356912b9bb65d6e7d0418 314 PIRSF PIRSF001439 1 309 1.9E-79 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Atu3949 03950b1efcf356912b9bb65d6e7d0418 314 Gene3D G3DSA:3.40.50.720 122 287 1.7E-83 T 14-10-2018 Atu3949 03950b1efcf356912b9bb65d6e7d0418 314 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 33 298 1.6E-68 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Atu3949 03950b1efcf356912b9bb65d6e7d0418 314 Gene3D G3DSA:3.30.1780.10 4 302 1.7E-83 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 SMART SM00345 12 70 2.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 SUPERFAMILY SSF46785 6 74 1.17E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 9.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 9.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 Gene3D G3DSA:1.10.10.10 1 71 7.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 Gene3D G3DSA:1.20.120.530 74 212 2.7E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 Pfam PF07729 FCD domain 80 202 1.8E-19 T 14-10-2018 IPR011711 GntR, C-terminal Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 1.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 SUPERFAMILY SSF48008 75 207 2.17E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4702 3134bc0fc63c7057b11d597e4e3f64c2 225 SMART SM00895 80 203 2.8E-15 T 14-10-2018 IPR011711 GntR, C-terminal Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 PIRSF PIRSF000429 27 412 3.3E-110 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 Gene3D G3DSA:3.40.47.10 154 407 2.9E-135 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 SUPERFAMILY SSF53901 291 411 7.2E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 112 130 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 ProSitePatterns PS00099 Thiolases active site. 393 406 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 Pfam PF02803 Thiolase, C-terminal domain 291 410 4.7E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 Gene3D G3DSA:3.40.47.10 34 295 2.9E-135 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 34 409 7.4E-122 T 14-10-2018 IPR002155 Thiolase GO:0016747 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 SUPERFAMILY SSF53901 32 288 1.23E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3475 b083a2c1b03cc0c05b90a1eda046b245 412 Pfam PF00108 Thiolase, N-terminal domain 32 282 2.0E-82 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Atu3963 3dcdc773aa113a2e26f685337d328b68 232 SMART SM00895 90 215 4.5E-10 T 14-10-2018 IPR011711 GntR, C-terminal Atu3963 3dcdc773aa113a2e26f685337d328b68 232 SUPERFAMILY SSF46785 15 84 1.3E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3963 3dcdc773aa113a2e26f685337d328b68 232 Pfam PF07729 FCD domain 94 214 3.5E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu3963 3dcdc773aa113a2e26f685337d328b68 232 SUPERFAMILY SSF48008 88 222 6.28E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3963 3dcdc773aa113a2e26f685337d328b68 232 SMART SM00345 22 80 2.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3963 3dcdc773aa113a2e26f685337d328b68 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 7.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3963 3dcdc773aa113a2e26f685337d328b68 232 Gene3D G3DSA:1.10.10.10 17 82 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3963 3dcdc773aa113a2e26f685337d328b68 232 Gene3D G3DSA:1.20.120.530 83 225 4.9E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3963 3dcdc773aa113a2e26f685337d328b68 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3963 3dcdc773aa113a2e26f685337d328b68 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 SUPERFAMILY SSF56645 36 269 3.53E-60 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 416 435 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Gene3D G3DSA:1.20.140.10 292 458 1.9E-49 T 14-10-2018 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 588 3.8E-14 T 14-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Gene3D G3DSA:2.40.110.10 158 291 4.2E-27 T 14-10-2018 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 37 155 4.5E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Gene3D G3DSA:1.10.540.10 29 156 1.2E-20 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 269 2.2E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 SUPERFAMILY SSF47203 285 459 2.9E-45 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu0732 dcd832499089e77f98d5bf07420d4f7d 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 452 6.5E-24 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu5019 b37fad4fee3a9205e87c392df7d7a0e3 256 SUPERFAMILY SSF51556 1 241 3.92E-49 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu5019 b37fad4fee3a9205e87c392df7d7a0e3 256 Gene3D G3DSA:3.20.20.140 1 251 5.0E-67 T 14-10-2018 Atu5019 b37fad4fee3a9205e87c392df7d7a0e3 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atu5019 b37fad4fee3a9205e87c392df7d7a0e3 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 180 196 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atu5019 b37fad4fee3a9205e87c392df7d7a0e3 256 PIRSF PIRSF005902 1 245 5.8E-44 T 14-10-2018 IPR001130 TatD family GO:0016788 Atu5019 b37fad4fee3a9205e87c392df7d7a0e3 256 Pfam PF01026 TatD related DNase 2 240 1.6E-44 T 14-10-2018 IPR001130 TatD family GO:0016788 Atu3136 2fb2367bb155ff813052ced7f7acd175 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 157 2.8E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu5408 4739f122888bd5163d415cf38abc4edf 284 SUPERFAMILY SSF161098 59 259 1.7E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu5408 4739f122888bd5163d415cf38abc4edf 284 Gene3D G3DSA:1.10.3720.10 47 275 2.0E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu5408 4739f122888bd5163d415cf38abc4edf 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 273 5.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5408 4739f122888bd5163d415cf38abc4edf 284 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 60 168 5.1E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1387 258fb720860571312630047921520b19 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 1.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1387 258fb720860571312630047921520b19 236 Pfam PF07729 FCD domain 83 203 1.1E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu1387 258fb720860571312630047921520b19 236 Gene3D G3DSA:1.20.120.530 75 212 1.4E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1387 258fb720860571312630047921520b19 236 SUPERFAMILY SSF46785 2 91 2.06E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1387 258fb720860571312630047921520b19 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 6.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1387 258fb720860571312630047921520b19 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 6.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1387 258fb720860571312630047921520b19 236 SMART SM00895 82 204 1.7E-10 T 14-10-2018 IPR011711 GntR, C-terminal Atu1387 258fb720860571312630047921520b19 236 SMART SM00345 14 72 1.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1387 258fb720860571312630047921520b19 236 SUPERFAMILY SSF48008 79 207 1.86E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1387 258fb720860571312630047921520b19 236 Gene3D G3DSA:1.10.10.10 1 73 2.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 Pfam PF00005 ABC transporter 20 161 8.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 SMART SM00382 28 219 2.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 Gene3D G3DSA:2.40.50.140 282 342 4.1E-23 T 14-10-2018 Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 Pfam PF03459 TOBE domain 295 348 1.8E-10 T 14-10-2018 IPR005116 Transport-associated OB, type 1 Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 Gene3D G3DSA:3.40.50.300 1 238 2.3E-76 T 14-10-2018 Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 SUPERFAMILY SSF50331 237 357 1.51E-28 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 SUPERFAMILY SSF52540 4 242 1.02E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3281 e9699893153edc4daa3b5ff5dfab698b 358 Gene3D G3DSA:2.40.50.100 239 355 4.1E-23 T 14-10-2018 Atu3338 acc05a47babce2a3cd5caeeebdb4161a 421 Gene3D G3DSA:3.40.190.10 44 368 1.6E-91 T 14-10-2018 Atu3338 acc05a47babce2a3cd5caeeebdb4161a 421 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 10 186 9.2E-4 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Atu3338 acc05a47babce2a3cd5caeeebdb4161a 421 Pfam PF01547 Bacterial extracellular solute-binding protein 35 331 6.2E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3338 acc05a47babce2a3cd5caeeebdb4161a 421 SUPERFAMILY SSF53850 21 416 1.94E-80 T 14-10-2018 Atu3338 acc05a47babce2a3cd5caeeebdb4161a 421 Gene3D G3DSA:3.40.190.10 136 407 1.6E-91 T 14-10-2018 Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 Gene3D G3DSA:2.30.30.30 1 101 4.2E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 SUPERFAMILY SSF50104 3 99 3.14E-31 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 SMART SM00739 3 30 9.2E-6 T 14-10-2018 IPR005824 KOW Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 100 7.3E-25 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 3.9E-35 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 Pfam PF00467 KOW motif 6 36 6.4E-7 T 14-10-2018 IPR005824 KOW Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 20.854 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1935 2358f8f581c28e919020ec59f1b9c0e2 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu2045 ba7e91100060fe11b7c540a0c57bab8f 372 Gene3D G3DSA:3.30.479.30 128 247 9.7E-20 T 14-10-2018 Atu2045 ba7e91100060fe11b7c540a0c57bab8f 372 Pfam PF01145 SPFH domain / Band 7 family 91 269 1.0E-28 T 14-10-2018 IPR001107 Band 7 domain Atu2045 ba7e91100060fe11b7c540a0c57bab8f 372 SMART SM00244 87 256 3.1E-27 T 14-10-2018 IPR001107 Band 7 domain Atu2045 ba7e91100060fe11b7c540a0c57bab8f 372 SUPERFAMILY SSF117892 119 262 8.11E-25 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Atu2045 ba7e91100060fe11b7c540a0c57bab8f 372 Pfam PF12221 Bacterial membrane protein N terminal 20 67 1.4E-10 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal Atu2045 ba7e91100060fe11b7c540a0c57bab8f 372 TIGRFAM TIGR01933 hflK: HflK protein 89 356 1.7E-84 T 14-10-2018 IPR010201 HflK GO:0016021 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 19 28 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 339 2.8E-112 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 SUPERFAMILY SSF51726 5 341 3.27E-99 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 137 153 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 Gene3D G3DSA:3.20.20.210 1 342 8.1E-121 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 6 339 7.5E-124 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atu2835 60d5a507e56b0b40c4e4d3edd3a2eade 344 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 3 341 46.649 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 PRINTS PR00189 Transthyretin signature 3 23 2.5E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 PRINTS PR00189 Transthyretin signature 96 118 2.5E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 Gene3D G3DSA:2.60.40.180 1 118 5.6E-39 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 SUPERFAMILY SSF49472 1 118 6.02E-41 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 Pfam PF00576 HIUase/Transthyretin family 4 117 2.0E-33 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 118 7.1E-38 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 ProSitePatterns PS00769 Transthyretin signature 2. 101 113 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu2323 1e4ae3f9682311c77556adb5abbea5d5 118 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Atu4516 f50e0f4b72ec51951b2e792dc7f96b0c 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 245 7.5E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu4516 f50e0f4b72ec51951b2e792dc7f96b0c 254 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4516 f50e0f4b72ec51951b2e792dc7f96b0c 254 Gene3D G3DSA:3.40.50.300 3 252 7.3E-56 T 14-10-2018 Atu4516 f50e0f4b72ec51951b2e792dc7f96b0c 254 SMART SM00382 29 222 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4516 f50e0f4b72ec51951b2e792dc7f96b0c 254 Pfam PF00005 ABC transporter 21 175 4.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4516 f50e0f4b72ec51951b2e792dc7f96b0c 254 SUPERFAMILY SSF52540 4 246 5.64E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4018 b13f6845d281b74304068c0585467530 445 SMART SM00387 336 444 1.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4018 b13f6845d281b74304068c0585467530 445 SUPERFAMILY SSF47384 210 290 3.14E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4018 b13f6845d281b74304068c0585467530 445 Gene3D G3DSA:1.10.287.130 178 291 8.4E-15 T 14-10-2018 Atu4018 b13f6845d281b74304068c0585467530 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 440 1.9E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4018 b13f6845d281b74304068c0585467530 445 SMART SM00388 227 291 5.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4018 b13f6845d281b74304068c0585467530 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 290 9.9E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4018 b13f6845d281b74304068c0585467530 445 SUPERFAMILY SSF55874 281 442 3.41E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4018 b13f6845d281b74304068c0585467530 445 Gene3D G3DSA:3.30.565.10 292 445 9.8E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 Gene3D G3DSA:3.40.50.300 366 518 2.8E-31 T 14-10-2018 Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 Gene3D G3DSA:3.40.50.300 576 682 6.6E-13 T 14-10-2018 Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 SUPERFAMILY SSF52980 1014 1146 1.55E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 Gene3D G3DSA:3.90.320.10 984 1168 2.7E-10 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 Pfam PF13361 UvrD-like helicase C-terminal domain 590 894 2.7E-19 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1014 1162 3.3E-13 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 24 1169 0.0 T 14-10-2018 IPR014151 DNA helicase, AddA type Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 481 4.6E-51 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atu0023 c63f601545f5ed9e379ef97d2443fe73 1185 SUPERFAMILY SSF52540 21 909 2.57E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6062 cd57f3779df9f02148263a23343eab1e 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 253 6.0E-62 T 14-10-2018 Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.7E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu6062 cd57f3779df9f02148263a23343eab1e 256 Gene3D G3DSA:3.40.50.720 12 255 2.4E-78 T 14-10-2018 Atu6062 cd57f3779df9f02148263a23343eab1e 256 SUPERFAMILY SSF51735 18 255 3.04E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 2.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu6062 cd57f3779df9f02148263a23343eab1e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2455 84aefd763206a3435d0726afc4395840 237 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 10 218 5.9E-82 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2455 84aefd763206a3435d0726afc4395840 237 SMART SM00987 54 214 6.1E-40 T 14-10-2018 Atu2455 84aefd763206a3435d0726afc4395840 237 SUPERFAMILY SSF52141 7 226 1.18E-93 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2455 84aefd763206a3435d0726afc4395840 237 Gene3D G3DSA:3.40.470.10 2 230 2.6E-101 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2455 84aefd763206a3435d0726afc4395840 237 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 62 71 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2455 84aefd763206a3435d0726afc4395840 237 Pfam PF03167 Uracil DNA glycosylase superfamily 59 213 6.7E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2455 84aefd763206a3435d0726afc4395840 237 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 9 225 40.808 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu2455 84aefd763206a3435d0726afc4395840 237 SMART SM00986 54 214 6.1E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.849 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 SUPERFAMILY SSF47336 2 76 3.27E-22 T 14-10-2018 IPR036736 ACP-like superfamily Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 Gene3D G3DSA:1.10.1200.10 1 78 1.2E-28 T 14-10-2018 IPR036736 ACP-like superfamily Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 73 1.0E-12 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 4.1E-32 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0049 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.2E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu1096 718e4eb6d6d125a0858cb9707ae53a5e 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3279 b205c233632e5c3eb940f05cb4a47482 385 Gene3D G3DSA:3.20.20.30 13 365 1.3E-91 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3279 b205c233632e5c3eb940f05cb4a47482 385 Pfam PF00296 Luciferase-like monooxygenase 32 334 2.2E-59 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3279 b205c233632e5c3eb940f05cb4a47482 385 SUPERFAMILY SSF51679 27 360 1.44E-76 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu2710 98e62613d351c1216b95513013c7fd38 508 Gene3D G3DSA:3.30.2010.10 88 171 8.8E-7 T 14-10-2018 Atu2710 98e62613d351c1216b95513013c7fd38 508 Pfam PF01435 Peptidase family M48 91 276 8.7E-31 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Atu0755 4495c252bef262c6c97db3740d65ffa8 100 Pfam PF07076 Protein of unknown function (DUF1344) 38 97 4.8E-31 T 14-10-2018 IPR009780 Protein of unknown function DUF1344 Atu5203 77ff67d5421213945b32454089399dcd 359 SUPERFAMILY SSF56281 32 278 2.17E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5203 77ff67d5421213945b32454089399dcd 359 Pfam PF00753 Metallo-beta-lactamase superfamily 72 209 5.2E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu5203 77ff67d5421213945b32454089399dcd 359 SMART SM00849 69 237 4.3E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu5203 77ff67d5421213945b32454089399dcd 359 Gene3D G3DSA:3.60.15.10 53 264 1.9E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu4249 56b7126a644c4d77a7f445545d4b5288 347 Pfam PF00005 ABC transporter 20 161 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4249 56b7126a644c4d77a7f445545d4b5288 347 SUPERFAMILY SSF50331 236 346 2.67E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4249 56b7126a644c4d77a7f445545d4b5288 347 SUPERFAMILY SSF52540 4 242 1.64E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4249 56b7126a644c4d77a7f445545d4b5288 347 Gene3D G3DSA:3.40.50.300 1 238 4.0E-73 T 14-10-2018 Atu4249 56b7126a644c4d77a7f445545d4b5288 347 SMART SM00382 28 211 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4249 56b7126a644c4d77a7f445545d4b5288 347 Pfam PF08402 TOBE domain 272 338 3.7E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4249 56b7126a644c4d77a7f445545d4b5288 347 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4249 56b7126a644c4d77a7f445545d4b5288 347 Gene3D G3DSA:2.40.50.140 285 329 1.4E-19 T 14-10-2018 Atu4249 56b7126a644c4d77a7f445545d4b5288 347 Gene3D G3DSA:2.40.50.100 239 341 1.4E-19 T 14-10-2018 Atu4762 a0baedded0ab80ee2045925e6e153ca4 492 Gene3D G3DSA:3.40.309.10 268 457 2.1E-173 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu4762 a0baedded0ab80ee2045925e6e153ca4 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu4762 a0baedded0ab80ee2045925e6e153ca4 492 SUPERFAMILY SSF53720 18 489 5.89E-160 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4762 a0baedded0ab80ee2045925e6e153ca4 492 Pfam PF00171 Aldehyde dehydrogenase family 28 485 9.2E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4762 a0baedded0ab80ee2045925e6e153ca4 492 Gene3D G3DSA:3.40.605.10 28 480 2.1E-173 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 Gene3D G3DSA:3.40.190.10 97 261 6.7E-39 T 14-10-2018 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 Gene3D G3DSA:3.40.190.10 163 256 6.7E-39 T 14-10-2018 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 Gene3D G3DSA:1.10.10.10 6 95 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3987 b543611f507706ac8f7b5421cff9c56b 293 SUPERFAMILY SSF53850 91 285 5.25E-21 T 14-10-2018 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 6.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3987 b543611f507706ac8f7b5421cff9c56b 293 SUPERFAMILY SSF46785 8 90 4.09E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3987 b543611f507706ac8f7b5421cff9c56b 293 Pfam PF03466 LysR substrate binding domain 90 283 1.1E-19 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1586 96b58def00ba08f57ad9369fdc158a12 602 Pfam PF01368 DHH family 103 229 6.1E-11 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu1586 96b58def00ba08f57ad9369fdc158a12 602 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 48 597 2.4E-163 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Atu1586 96b58def00ba08f57ad9369fdc158a12 602 Pfam PF02272 DHHA1 domain 345 472 4.3E-21 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Atu1586 96b58def00ba08f57ad9369fdc158a12 602 SUPERFAMILY SSF64182 77 479 1.22E-112 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Atu1586 96b58def00ba08f57ad9369fdc158a12 602 Gene3D G3DSA:3.10.310.30 350 478 5.1E-28 T 14-10-2018 Atu1586 96b58def00ba08f57ad9369fdc158a12 602 Gene3D G3DSA:3.90.1640.30 78 349 3.8E-83 T 14-10-2018 Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 SUPERFAMILY SSF51735 5 240 3.96E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 Gene3D G3DSA:3.40.50.720 1 240 5.3E-72 T 14-10-2018 Atu4325 d2cc616dd5384067a5f90776dc62bc41 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 238 2.3E-57 T 14-10-2018 Atu1423 ac98bee81fbc2d4352b285da73e9d814 292 SUPERFAMILY SSF54593 174 269 1.78E-5 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1423 ac98bee81fbc2d4352b285da73e9d814 292 Pfam PF13468 Glyoxalase-like domain 7 196 1.1E-25 T 14-10-2018 IPR025870 Glyoxalase-like domain Atu1459 c304c41e45023fc95666da140116362d 425 SUPERFAMILY SSF103473 26 418 5.1E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1459 c304c41e45023fc95666da140116362d 425 Gene3D G3DSA:1.20.1250.20 227 418 7.0E-18 T 14-10-2018 Atu1459 c304c41e45023fc95666da140116362d 425 Gene3D G3DSA:1.20.1250.20 24 206 2.2E-7 T 14-10-2018 Atu1459 c304c41e45023fc95666da140116362d 425 Pfam PF12832 MFS_1 like family 32 384 1.7E-12 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 2.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 Gene3D G3DSA:3.40.190.10 166 269 1.9E-44 T 14-10-2018 Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 Pfam PF03466 LysR substrate binding domain 90 296 1.2E-29 T 14-10-2018 IPR005119 LysR, substrate-binding Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 Gene3D G3DSA:3.40.190.10 93 293 1.9E-44 T 14-10-2018 Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 Gene3D G3DSA:1.10.10.10 5 91 4.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 SUPERFAMILY SSF46785 5 114 9.96E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6080 cbc12879a7bdce6f2c504394c6f7f1fa 320 SUPERFAMILY SSF53850 91 298 2.53E-33 T 14-10-2018 Atu2274 35f4608b62847fc1a450017669a04009 300 SUPERFAMILY SSF161111 8 208 1.15E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu2274 35f4608b62847fc1a450017669a04009 300 Gene3D G3DSA:1.20.1510.10 8 206 2.4E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu2274 35f4608b62847fc1a450017669a04009 300 Pfam PF01545 Cation efflux family 19 207 2.8E-39 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atu2274 35f4608b62847fc1a450017669a04009 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 290 4.0E-71 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atu2274 35f4608b62847fc1a450017669a04009 300 SUPERFAMILY SSF160240 210 289 1.23E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Atu2274 35f4608b62847fc1a450017669a04009 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 289 1.6E-26 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Atu2274 35f4608b62847fc1a450017669a04009 300 Gene3D G3DSA:3.30.70.1350 207 295 5.4E-33 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Atu5222 d7bc2225f112fb0859ecbe016db055da 308 Gene3D G3DSA:3.40.50.720 92 274 3.9E-100 T 14-10-2018 Atu5222 d7bc2225f112fb0859ecbe016db055da 308 Gene3D G3DSA:3.40.50.720 15 305 3.9E-100 T 14-10-2018 Atu5222 d7bc2225f112fb0859ecbe016db055da 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 273 8.0E-42 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu5222 d7bc2225f112fb0859ecbe016db055da 308 SUPERFAMILY SSF51735 92 273 2.1E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4351 b53e8f2cf1bece7a0b7fb39aaa952963 224 Pfam PF08887 GAD-like domain 7 110 1.4E-33 T 14-10-2018 IPR014983 GAD-related Atu4351 b53e8f2cf1bece7a0b7fb39aaa952963 224 Pfam PF08906 Domain of unknown function (DUF1851) 141 196 8.9E-8 T 14-10-2018 IPR015002 Domain of unknown function DUF1851 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 SUPERFAMILY SSF54980 398 512 1.73E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Gene3D G3DSA:3.30.70.240 388 481 1.2E-126 T 14-10-2018 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Pfam PF03144 Elongation factor Tu domain 2 217 288 5.1E-14 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Gene3D G3DSA:2.40.50.250 482 598 1.2E-126 T 14-10-2018 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 8.1E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Gene3D G3DSA:3.30.70.870 305 589 1.2E-126 T 14-10-2018 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Gene3D G3DSA:2.40.30.10 198 298 3.6E-28 T 14-10-2018 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu2663 cebc4749a964f7c5044f1df774141c6b 606 SMART SM00838 395 483 7.4E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Atu2663 cebc4749a964f7c5044f1df774141c6b 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 151 2.6E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 SUPERFAMILY SSF52540 3 199 1.44E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2663 cebc4749a964f7c5044f1df774141c6b 606 PRINTS PR00315 GTP-binding elongation factor signature 49 57 9.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 PRINTS PR00315 GTP-binding elongation factor signature 121 130 9.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 PRINTS PR00315 GTP-binding elongation factor signature 85 96 9.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 PRINTS PR00315 GTP-binding elongation factor signature 69 79 9.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 PRINTS PR00315 GTP-binding elongation factor signature 5 18 9.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 598 1.9E-275 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Gene3D G3DSA:3.40.50.300 2 197 8.6E-64 T 14-10-2018 Atu2663 cebc4749a964f7c5044f1df774141c6b 606 SUPERFAMILY SSF54980 301 386 2.34E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu2663 cebc4749a964f7c5044f1df774141c6b 606 Pfam PF00679 Elongation factor G C-terminus 396 480 9.5E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Atu2663 cebc4749a964f7c5044f1df774141c6b 606 SUPERFAMILY SSF50447 149 296 1.85E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu4421 cf38cc12c131a3fcdd421754b78d0b94 340 Pfam PF13416 Bacterial extracellular solute-binding protein 44 304 5.0E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4421 cf38cc12c131a3fcdd421754b78d0b94 340 Gene3D G3DSA:3.40.190.10 130 334 2.3E-77 T 14-10-2018 Atu4421 cf38cc12c131a3fcdd421754b78d0b94 340 SUPERFAMILY SSF53850 27 335 3.0E-58 T 14-10-2018 Atu4421 cf38cc12c131a3fcdd421754b78d0b94 340 Gene3D G3DSA:3.40.190.10 39 305 2.3E-77 T 14-10-2018 Atu3391 8c5fa125b143434ecd95c63b03a332a8 377 Pfam PF01497 Periplasmic binding protein 104 317 7.2E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu3391 8c5fa125b143434ecd95c63b03a332a8 377 Gene3D G3DSA:3.40.50.1980 27 374 4.9E-109 T 14-10-2018 Atu3391 8c5fa125b143434ecd95c63b03a332a8 377 SUPERFAMILY SSF53807 27 344 2.43E-52 T 14-10-2018 Atu2554 4681d8b7e1ee1b8cdc183ed245282b9c 354 Pfam PF00152 tRNA synthetases class II (D, K and N) 19 345 3.6E-31 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2554 4681d8b7e1ee1b8cdc183ed245282b9c 354 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 26 346 1.3E-110 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Atu2554 4681d8b7e1ee1b8cdc183ed245282b9c 354 SUPERFAMILY SSF55681 20 349 3.98E-69 T 14-10-2018 Atu2554 4681d8b7e1ee1b8cdc183ed245282b9c 354 Gene3D G3DSA:3.30.930.10 9 351 4.3E-82 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1026 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:1.20.1640.10 511 1020 0.0 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82693 670 854 1.1E-19 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82714 181 271 4.71E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82866 295 496 2.35E-50 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:3.30.70.1320 132 331 0.0 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82866 834 1024 2.88E-44 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-102 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82693 38 128 2.28E-23 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82693 135 329 1.24E-22 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:3.30.2090.10 178 274 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Pfam PF00873 AcrB/AcrD/AcrF family 1 1024 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82693 563 669 1.28E-30 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 SUPERFAMILY SSF82714 721 804 2.62E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:3.30.70.1440 667 863 0.0 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:3.30.70.1430 38 815 0.0 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:1.20.1640.10 8 510 0.0 T 14-10-2018 Atu2551 f5abd6b320a2ff91b0031656f2486ae0 1029 Gene3D G3DSA:3.30.70.1430 565 666 0.0 T 14-10-2018 Atu4621 7c8797cc1d8e4dce3251b7eaea5cc21d 281 SMART SM00382 35 242 8.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4621 7c8797cc1d8e4dce3251b7eaea5cc21d 281 Gene3D G3DSA:3.40.50.300 7 279 3.4E-69 T 14-10-2018 Atu4621 7c8797cc1d8e4dce3251b7eaea5cc21d 281 SUPERFAMILY SSF52540 8 248 1.55E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4621 7c8797cc1d8e4dce3251b7eaea5cc21d 281 Pfam PF00005 ABC transporter 29 185 2.7E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 473 1.5E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 Gene3D G3DSA:1.20.1440.210 35 158 7.4E-27 T 14-10-2018 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 SMART SM00387 363 475 1.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 Gene3D G3DSA:1.10.287.130 196 315 1.2E-11 T 14-10-2018 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 7.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 417 7.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 7.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 7.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 SUPERFAMILY SSF55874 312 472 3.93E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 Pfam PF05227 CHASE3 domain 28 158 6.7E-30 T 14-10-2018 IPR007891 CHASE3 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 SUPERFAMILY SSF47384 214 319 3.92E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu1986 b492185e1bc4657f5c0531f3e34ec7c6 484 Gene3D G3DSA:3.30.565.10 316 473 1.9E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4208 522c630f6d8b0b99c9bdae89a8efa91e 457 SUPERFAMILY SSF53850 55 423 3.91E-53 T 14-10-2018 Atu4208 522c630f6d8b0b99c9bdae89a8efa91e 457 Gene3D G3DSA:3.40.190.10 24 441 3.1E-50 T 14-10-2018 Atu4208 522c630f6d8b0b99c9bdae89a8efa91e 457 Pfam PF01547 Bacterial extracellular solute-binding protein 49 356 1.4E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 6.0E-45 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 444 2.7E-23 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.3E-25 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-25 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.3E-25 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.3E-25 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.3E-25 T 14-10-2018 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 PIRSF PIRSF000350 1 441 9.2E-94 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 Gene3D G3DSA:3.30.390.30 339 453 1.1E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 Gene3D G3DSA:3.50.50.60 144 261 2.8E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 SUPERFAMILY SSF51905 1 315 1.77E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 307 6.8E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 Gene3D G3DSA:3.50.50.60 4 324 2.8E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 SUPERFAMILY SSF55424 341 447 2.58E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu5537 9c1b3fc8e7d79410c0cc53aef4eb0b87 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atu3990 da6a77dccdf42e8c1b48822f2651a333 158 SUPERFAMILY SSF49503 42 155 3.28E-29 T 14-10-2018 IPR008972 Cupredoxin Atu3990 da6a77dccdf42e8c1b48822f2651a333 158 ProSitePatterns PS00079 Multicopper oxidases signature 1. 133 153 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site Atu3990 da6a77dccdf42e8c1b48822f2651a333 158 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 52 155 8.6E-10 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 Atu3990 da6a77dccdf42e8c1b48822f2651a333 158 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 110 154 5.0E-4 T 14-10-2018 Atu3990 da6a77dccdf42e8c1b48822f2651a333 158 Gene3D G3DSA:2.60.40.420 31 156 1.3E-26 T 14-10-2018 IPR008972 Cupredoxin Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 SUPERFAMILY SSF54752 280 337 1.29E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 ProSitePatterns PS00321 recA signature. 225 233 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 Hamap MF_00268 Protein RecA [recA]. 16 341 51.94 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 335 4.0E-174 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 Pfam PF00154 recA bacterial DNA recombination protein 18 280 1.3E-147 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 SMART SM00382 69 240 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 Gene3D G3DSA:3.30.250.10 281 340 6.9E-26 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 SUPERFAMILY SSF52540 18 279 4.68E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 PRINTS PR00142 RecA protein signature 105 134 3.9E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 PRINTS PR00142 RecA protein signature 177 206 3.9E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 PRINTS PR00142 RecA protein signature 139 168 3.9E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 PRINTS PR00142 RecA protein signature 222 250 3.9E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 PRINTS PR00142 RecA protein signature 255 284 3.9E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 PRINTS PR00142 RecA protein signature 309 326 3.9E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Atu1874 a5a1d6006e00ce2400158a5941b7bdeb 363 Gene3D G3DSA:3.40.50.300 40 280 5.9E-83 T 14-10-2018 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 50 71 1.6E-5 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 142 156 1.6E-5 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 238 257 1.6E-5 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 Gene3D G3DSA:3.40.190.10 127 310 8.0E-80 T 14-10-2018 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 Gene3D G3DSA:3.40.190.10 32 295 8.0E-80 T 14-10-2018 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 Pfam PF13343 Bacterial extracellular solute-binding protein 80 300 5.5E-36 T 14-10-2018 Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 PIRSF PIRSF002825 1 327 3.0E-96 T 14-10-2018 IPR026045 Ferric binding protein Atu4577 0de2c23c5da4fe6578e0acd9e5c0f1dc 330 SUPERFAMILY SSF53850 26 324 2.13E-69 T 14-10-2018 Atu3011 12636e6fdd0643d3992990f2fa64979b 118 Pfam PF12840 Helix-turn-helix domain 16 73 3.6E-14 T 14-10-2018 Atu3011 12636e6fdd0643d3992990f2fa64979b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 5.1E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3011 12636e6fdd0643d3992990f2fa64979b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 5.1E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3011 12636e6fdd0643d3992990f2fa64979b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 5.1E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3011 12636e6fdd0643d3992990f2fa64979b 118 Gene3D G3DSA:1.10.10.10 4 116 4.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3011 12636e6fdd0643d3992990f2fa64979b 118 SUPERFAMILY SSF46785 11 105 6.82E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3011 12636e6fdd0643d3992990f2fa64979b 118 SMART SM00418 15 93 2.2E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2689 49d3327341087195dd5253c0a4af2465 57 Pfam PF04995 Heme exporter protein D (CcmD) 1 43 7.7E-15 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Atu2689 49d3327341087195dd5253c0a4af2465 57 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 1 43 7.2E-16 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 Gene3D G3DSA:1.10.3730.40 183 339 8.8E-74 T 14-10-2018 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 329 44.697 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 3.5E-70 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 1.7E-124 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 Gene3D G3DSA:3.40.50.720 1 182 1.0E-69 T 14-10-2018 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 SUPERFAMILY SSF51735 1 183 5.87E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 SUPERFAMILY SSF48179 184 333 5.95E-71 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 PIRSF PIRSF000116 202 333 3.8E-14 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 PIRSF PIRSF000116 6 206 1.6E-41 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atu2019 80cdc58cb85feb43e313dc55f6ba0be3 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 3.8E-65 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Atu0817 df41e593114942b0dc263d27d9688e42 317 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 272 4.9E-61 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Atu0817 df41e593114942b0dc263d27d9688e42 317 SUPERFAMILY SSF52402 22 225 2.33E-69 T 14-10-2018 Atu0817 df41e593114942b0dc263d27d9688e42 317 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 24 317 5.4E-157 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Atu0817 df41e593114942b0dc263d27d9688e42 317 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 19 317 56.653 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Atu0817 df41e593114942b0dc263d27d9688e42 317 PIRSF PIRSF002936 15 317 8.2E-143 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Atu0817 df41e593114942b0dc263d27d9688e42 317 Gene3D G3DSA:3.40.50.620 22 227 1.6E-61 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1831 3d31158df6c75ab6bca9ef14276c1f9e 274 Pfam PF04305 Protein of unknown function (DUF455) 20 265 5.9E-96 T 14-10-2018 IPR007402 Protein of unknown function DUF455 Atu1831 3d31158df6c75ab6bca9ef14276c1f9e 274 SUPERFAMILY SSF47240 79 238 2.15E-16 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu1831 3d31158df6c75ab6bca9ef14276c1f9e 274 PIRSF PIRSF012318 2 274 4.8E-114 T 14-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 Atu0659 996a0ffc062770862e0b0be5d483c3af 159 Gene3D G3DSA:3.90.79.10 20 157 2.0E-22 T 14-10-2018 Atu0659 996a0ffc062770862e0b0be5d483c3af 159 SUPERFAMILY SSF55811 12 153 5.04E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu3708 87532b46c32ac4ac961534a57322ff1c 281 Pfam PF13505 Outer membrane protein beta-barrel domain 13 235 1.6E-13 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel Atu3708 87532b46c32ac4ac961534a57322ff1c 281 Gene3D G3DSA:2.40.160.20 41 259 3.6E-35 T 14-10-2018 Atu3708 87532b46c32ac4ac961534a57322ff1c 281 SUPERFAMILY SSF56925 42 259 6.02E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu5015 e9b568f138fbb8ec079534ebad938c68 346 SUPERFAMILY SSF47823 12 138 1.57E-5 T 14-10-2018 Atu5015 e9b568f138fbb8ec079534ebad938c68 346 Gene3D G3DSA:1.10.150.130 6 144 7.7E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Atu5015 e9b568f138fbb8ec079534ebad938c68 346 Gene3D G3DSA:1.10.443.10 145 335 4.6E-40 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu5015 e9b568f138fbb8ec079534ebad938c68 346 Pfam PF00589 Phage integrase family 148 335 1.5E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atu5015 e9b568f138fbb8ec079534ebad938c68 346 SUPERFAMILY SSF56349 142 344 3.53E-39 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu1959 f88a9451748e554bcee531c879042bf3 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1959 f88a9451748e554bcee531c879042bf3 231 Gene3D G3DSA:3.40.50.790 68 159 9.2E-82 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Atu1959 f88a9451748e554bcee531c879042bf3 231 Gene3D G3DSA:3.30.190.20 21 224 9.2E-82 T 14-10-2018 Atu1959 f88a9451748e554bcee531c879042bf3 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 7.7E-100 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Atu1959 f88a9451748e554bcee531c879042bf3 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 5.9E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Atu1959 f88a9451748e554bcee531c879042bf3 231 SUPERFAMILY SSF56808 6 225 1.57E-83 T 14-10-2018 IPR023674 Ribosomal protein L1-like Atu1959 f88a9451748e554bcee531c879042bf3 231 PIRSF PIRSF002155 1 227 6.5E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1959 f88a9451748e554bcee531c879042bf3 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.313 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Atu3950 ca932052721f2001aa85b491b0946070 485 Pfam PF00171 Aldehyde dehydrogenase family 23 480 3.2E-155 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu3950 ca932052721f2001aa85b491b0946070 485 SUPERFAMILY SSF53720 8 480 7.33E-154 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu3950 ca932052721f2001aa85b491b0946070 485 Gene3D G3DSA:3.40.605.10 30 478 8.7E-162 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3950 ca932052721f2001aa85b491b0946070 485 Gene3D G3DSA:3.40.309.10 262 453 8.7E-162 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu1103 a8746f77ebbda286bd8a3196b239e462 276 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 275 6.5E-70 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Atu1103 a8746f77ebbda286bd8a3196b239e462 276 SUPERFAMILY SSF53335 16 275 9.82E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1103 a8746f77ebbda286bd8a3196b239e462 276 SMART SM00650 35 212 2.1E-65 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Atu1103 a8746f77ebbda286bd8a3196b239e462 276 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 276 52.583 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Atu1103 a8746f77ebbda286bd8a3196b239e462 276 Gene3D G3DSA:1.10.8.100 216 276 1.1E-23 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Atu1103 a8746f77ebbda286bd8a3196b239e462 276 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 275 2.3E-49 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Atu1103 a8746f77ebbda286bd8a3196b239e462 276 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 79 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Atu1103 a8746f77ebbda286bd8a3196b239e462 276 Gene3D G3DSA:3.40.50.150 1 215 9.5E-69 T 14-10-2018 Atu6132 e575b88c97178445f931acd9904a7096 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 3.8E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu6132 e575b88c97178445f931acd9904a7096 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 3.8E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu6132 e575b88c97178445f931acd9904a7096 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 3.8E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu6132 e575b88c97178445f931acd9904a7096 579 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 318 347 3.8E-41 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu6132 e575b88c97178445f931acd9904a7096 579 Gene3D G3DSA:3.30.450.20 145 244 7.9E-17 T 14-10-2018 Atu6132 e575b88c97178445f931acd9904a7096 579 SUPERFAMILY SSF55785 21 125 1.43E-24 T 14-10-2018 IPR035965 PAS domain superfamily Atu6132 e575b88c97178445f931acd9904a7096 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 510 3.2E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu6132 e575b88c97178445f931acd9904a7096 579 Gene3D G3DSA:1.10.287.950 245 546 4.4E-76 T 14-10-2018 Atu6132 e575b88c97178445f931acd9904a7096 579 SMART SM00283 297 544 1.3E-95 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu6132 e575b88c97178445f931acd9904a7096 579 Gene3D G3DSA:3.30.450.20 12 144 1.3E-22 T 14-10-2018 Atu6132 e575b88c97178445f931acd9904a7096 579 SUPERFAMILY SSF58104 264 545 4.58E-65 T 14-10-2018 Atu6132 e575b88c97178445f931acd9904a7096 579 SMART SM00086 83 124 1.1E-4 T 14-10-2018 IPR001610 PAC motif Atu6132 e575b88c97178445f931acd9904a7096 579 SMART SM00086 204 246 38.0 T 14-10-2018 IPR001610 PAC motif Atu6132 e575b88c97178445f931acd9904a7096 579 Pfam PF08447 PAS fold 33 118 1.5E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu6132 e575b88c97178445f931acd9904a7096 579 Pfam PF08447 PAS fold 154 239 1.1E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu6132 e575b88c97178445f931acd9904a7096 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 125 1.7E-15 T 14-10-2018 IPR000014 PAS domain Atu6132 e575b88c97178445f931acd9904a7096 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 253 2.2E-11 T 14-10-2018 IPR000014 PAS domain Atu6132 e575b88c97178445f931acd9904a7096 579 SUPERFAMILY SSF55785 142 243 1.71E-20 T 14-10-2018 IPR035965 PAS domain superfamily Atu6132 e575b88c97178445f931acd9904a7096 579 SMART SM00091 129 198 74.0 T 14-10-2018 IPR000014 PAS domain Atu6132 e575b88c97178445f931acd9904a7096 579 SMART SM00091 8 78 0.041 T 14-10-2018 IPR000014 PAS domain Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 SUPERFAMILY SSF48498 94 174 8.01E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 1.0E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 SUPERFAMILY SSF46689 10 85 1.38E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 Gene3D G3DSA:1.10.10.60 3 58 8.5E-17 T 14-10-2018 Atu5383 08e09cf0d4856aa54a51ab73c6d74413 199 Gene3D G3DSA:1.10.357.10 59 199 1.3E-11 T 14-10-2018 Atu1305 774208ecf28b5e9a69a1bcf19b9dcd2f 380 Pfam PF02481 DNA recombination-mediator protein A 81 284 4.0E-65 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Atu1305 774208ecf28b5e9a69a1bcf19b9dcd2f 380 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 294 7.4E-62 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Atu1305 774208ecf28b5e9a69a1bcf19b9dcd2f 380 Gene3D G3DSA:3.40.50.450 2 298 4.8E-106 T 14-10-2018 Atu1305 774208ecf28b5e9a69a1bcf19b9dcd2f 380 SUPERFAMILY SSF102405 90 295 1.33E-35 T 14-10-2018 Atu1305 774208ecf28b5e9a69a1bcf19b9dcd2f 380 Gene3D G3DSA:1.10.10.10 305 376 2.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 Gene3D G3DSA:3.50.50.60 3 287 1.7E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 Gene3D G3DSA:3.50.50.60 115 221 1.7E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 SUPERFAMILY SSF51905 1 290 9.48E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 5.5E-12 T 14-10-2018 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 5.5E-12 T 14-10-2018 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.5E-12 T 14-10-2018 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 245 267 5.5E-12 T 14-10-2018 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 4.7E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 4.7E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 4.7E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 255 273 4.7E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 4.7E-12 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu0238 0bf9e3baf96f691cf1314cc3fc4bcd25 297 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 277 3.8E-22 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 SUPERFAMILY SSF52540 149 397 2.37E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 SMART SM00382 190 329 8.1E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 107 599 1.6E-235 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 SUPERFAMILY SSF140990 409 603 1.83E-72 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Gene3D G3DSA:3.40.50.300 146 326 6.5E-71 T 14-10-2018 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 612 37.698 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Pfam PF06480 FtsH Extracellular 10 95 3.7E-14 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Pfam PF01434 Peptidase family M41 387 598 4.2E-78 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Gene3D G3DSA:1.20.58.760 408 608 1.4E-72 T 14-10-2018 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Gene3D G3DSA:1.10.8.60 328 405 5.6E-30 T 14-10-2018 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 8.8E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu3710 c18a5c415f2d7dd07db5ff5dbc1a07ca 648 Gene3D G3DSA:2.40.50.920 29 104 9.5E-12 T 14-10-2018 Atu5103 796f4bddce4c09fd34794d264f264eeb 310 PIRSF PIRSF037112 1 310 3.5E-114 T 14-10-2018 IPR017113 Antirestriction, ArdC Atu5103 796f4bddce4c09fd34794d264f264eeb 310 Pfam PF08401 Domain of unknown function (DUF1738) 11 130 1.4E-38 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 SMART SM00388 243 300 4.5E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 SMART SM00387 344 444 2.0E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 SUPERFAMILY SSF47384 226 298 1.18E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 Gene3D G3DSA:3.30.565.10 297 444 7.5E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 443 1.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 SUPERFAMILY SSF55874 290 444 7.99E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 444 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4639 0b24dc6a6dd716208d471a6e04c61b64 444 Gene3D G3DSA:1.10.287.130 195 296 1.5E-15 T 14-10-2018 Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 Gene3D G3DSA:3.50.50.60 1 73 3.1E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 SUPERFAMILY SSF51905 1 416 5.7E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.704 T 14-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 Gene3D G3DSA:3.50.50.60 97 406 7.6E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.8E-68 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 Gene3D G3DSA:3.30.9.10 134 362 7.6E-54 T 14-10-2018 Atu3293 26c04cc1c9aa6eb7d3adde2e75325c8d 418 SUPERFAMILY SSF54373 270 360 2.35E-14 T 14-10-2018 Atu1624 76e21f9780c4557476e3b26e579732dd 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 7.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1624 76e21f9780c4557476e3b26e579732dd 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 7.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1624 76e21f9780c4557476e3b26e579732dd 219 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 155 207 1.5E-6 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Atu1624 76e21f9780c4557476e3b26e579732dd 219 Gene3D G3DSA:1.10.10.60 2 66 6.0E-17 T 14-10-2018 Atu1624 76e21f9780c4557476e3b26e579732dd 219 Gene3D G3DSA:1.10.357.10 78 215 1.8E-22 T 14-10-2018 Atu1624 76e21f9780c4557476e3b26e579732dd 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 3.0E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1624 76e21f9780c4557476e3b26e579732dd 219 SUPERFAMILY SSF46689 12 80 1.8E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2634 d4bc97b8e730b6c69f566b42412efea4 137 Gene3D G3DSA:1.20.120.550 8 137 7.1E-19 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Atu2634 d4bc97b8e730b6c69f566b42412efea4 137 SUPERFAMILY SSF161084 10 136 6.28E-25 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Atu2634 d4bc97b8e730b6c69f566b42412efea4 137 Pfam PF01124 MAPEG family 17 135 1.3E-18 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Atu4784 673763a707ed8f083ddc89fffbdc7c7f 341 Gene3D G3DSA:3.40.190.10 31 303 8.0E-104 T 14-10-2018 Atu4784 673763a707ed8f083ddc89fffbdc7c7f 341 PIRSF PIRSF002825 2 337 3.2E-64 T 14-10-2018 IPR026045 Ferric binding protein Atu4784 673763a707ed8f083ddc89fffbdc7c7f 341 Pfam PF13343 Bacterial extracellular solute-binding protein 73 316 2.7E-33 T 14-10-2018 Atu4784 673763a707ed8f083ddc89fffbdc7c7f 341 Gene3D G3DSA:3.40.190.10 131 317 8.0E-104 T 14-10-2018 Atu4784 673763a707ed8f083ddc89fffbdc7c7f 341 SUPERFAMILY SSF53850 26 334 1.82E-73 T 14-10-2018 Atu4491 96ad33ec3591930462aa63ad8852db9a 314 SMART SM00450 125 226 1.1E-20 T 14-10-2018 IPR001763 Rhodanese-like domain Atu4491 96ad33ec3591930462aa63ad8852db9a 314 SUPERFAMILY SSF52821 102 237 7.13E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu4491 96ad33ec3591930462aa63ad8852db9a 314 Gene3D G3DSA:3.30.70.100 8 108 7.1E-33 T 14-10-2018 Atu4491 96ad33ec3591930462aa63ad8852db9a 314 Hamap MF_00469 UPF0176 protein YceA [yceA]. 14 266 46.185 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 Atu4491 96ad33ec3591930462aa63ad8852db9a 314 Pfam PF00581 Rhodanese-like domain 131 222 2.7E-8 T 14-10-2018 IPR001763 Rhodanese-like domain Atu4491 96ad33ec3591930462aa63ad8852db9a 314 Gene3D G3DSA:3.40.250.10 109 262 5.6E-50 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu0666 07f77b9da15300e45c714fe84738c880 400 SUPERFAMILY SSF56176 3 180 3.32E-32 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu0666 07f77b9da15300e45c714fe84738c880 400 Pfam PF01565 FAD binding domain 5 142 9.4E-17 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Atu0666 07f77b9da15300e45c714fe84738c880 400 SUPERFAMILY SSF55103 192 397 1.18E-19 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Atu0666 07f77b9da15300e45c714fe84738c880 400 Gene3D G3DSA:3.30.465.10 54 179 1.0E-32 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 SMART SM00346 9 99 7.1E-20 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 Gene3D G3DSA:2.120.10.30 273 559 3.6E-96 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 Gene3D G3DSA:1.10.10.10 9 83 2.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 SUPERFAMILY SSF46785 11 83 9.1E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 Pfam PF01614 Bacterial transcriptional regulator 127 249 1.6E-27 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 284 526 5.0E-85 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 SUPERFAMILY SSF55781 67 252 5.36E-46 T 14-10-2018 Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 SUPERFAMILY SSF63829 261 554 3.49E-68 T 14-10-2018 Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 Gene3D G3DSA:3.30.450.40 84 257 4.1E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 Pfam PF09339 IclR helix-turn-helix domain 11 61 2.4E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 465 482 4.4E-38 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 425 445 4.4E-38 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 285 302 4.4E-38 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 361 382 4.4E-38 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 507 525 4.4E-38 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu5464 fb6caa3b9ab0a935fe3e278588fc0add 560 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 402 424 4.4E-38 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu0010 17c69a7f2be5a36ad13e1ee18e47796f 189 Gene3D G3DSA:3.30.1370.110 57 188 9.3E-35 T 14-10-2018 Atu0010 17c69a7f2be5a36ad13e1ee18e47796f 189 SMART SM00463 96 182 5.1E-8 T 14-10-2018 IPR002625 Smr domain Atu0010 17c69a7f2be5a36ad13e1ee18e47796f 189 SUPERFAMILY SSF160443 97 181 1.07E-16 T 14-10-2018 IPR036063 Smr domain superfamily Atu0010 17c69a7f2be5a36ad13e1ee18e47796f 189 Pfam PF01713 Smr domain 99 181 8.9E-23 T 14-10-2018 IPR002625 Smr domain Atu0657 2d9275c5048a18c3e36217858fa36939 239 SUPERFAMILY SSF88697 1 70 3.98E-14 T 14-10-2018 IPR015947 PUA-like superfamily Atu0657 2d9275c5048a18c3e36217858fa36939 239 PIRSF PIRSF015601 1 238 2.5E-56 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Atu0657 2d9275c5048a18c3e36217858fa36939 239 Pfam PF04452 RNA methyltransferase 18 233 1.5E-62 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Atu0657 2d9275c5048a18c3e36217858fa36939 239 Gene3D G3DSA:2.40.240.20 2 70 2.5E-25 T 14-10-2018 Atu0657 2d9275c5048a18c3e36217858fa36939 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 8 237 5.8E-41 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Atu0657 2d9275c5048a18c3e36217858fa36939 239 Gene3D G3DSA:3.40.1280.10 71 239 3.5E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu0657 2d9275c5048a18c3e36217858fa36939 239 SUPERFAMILY SSF75217 74 239 8.37E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 219 458 2.2E-82 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 Gene3D G3DSA:3.40.50.720 3 284 2.7E-107 T 14-10-2018 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 30 191 1.0E-42 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 SUPERFAMILY SSF51735 5 284 1.02E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 PRINTS PR00084 Mannitol dehydrogenase signature 182 195 3.4E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 PRINTS PR00084 Mannitol dehydrogenase signature 31 41 3.4E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 PRINTS PR00084 Mannitol dehydrogenase signature 221 234 3.4E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 PRINTS PR00084 Mannitol dehydrogenase signature 251 266 3.4E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 221 233 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 SUPERFAMILY SSF48179 286 488 5.78E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu4451 cdc964d2bb6829dccf88a9cc77580051 494 Gene3D G3DSA:1.10.1040.10 285 490 6.7E-57 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:1.10.10.1830 7 59 2.0E-9 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Pfam PF00501 AMP-binding enzyme 538 929 4.5E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 SUPERFAMILY SSF52777 265 506 5.11E-51 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 SUPERFAMILY SSF47336 1034 1106 7.72E-16 T 14-10-2018 IPR036736 ACP-like superfamily Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 ProSitePatterns PS00455 Putative AMP-binding domain signature. 679 690 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:3.30.559.10 80 447 1.5E-129 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 PIRSF PIRSF001617 262 677 5.0E-19 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 PIRSF PIRSF001617 669 1479 1.4E-86 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Pfam PF13193 AMP-binding enzyme C-terminal domain 937 1016 2.0E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 SUPERFAMILY SSF52777 81 253 1.89E-45 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Pfam PF00550 Phosphopantetheine attachment site 1044 1106 1.2E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:3.40.50.12780 529 921 1.1E-121 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 1145 1507 1.7E-121 T 14-10-2018 IPR010080 Thioester reductase-like domain Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 SMART SM00823 Phosphopantetheine attachment site 1041 1110 0.0045 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 563 953 2.6E-121 T 14-10-2018 IPR010071 Amino acid adenylation domain Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:3.30.300.30 922 1027 4.6E-31 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 SUPERFAMILY SSF56801 497 1054 3.14E-145 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 SUPERFAMILY SSF51735 1145 1415 1.7E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:1.10.1200.10 1028 1112 8.9E-22 T 14-10-2018 IPR036736 ACP-like superfamily Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:3.40.50.720 1118 1510 7.6E-99 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Pfam PF07993 Male sterility protein 1148 1384 2.7E-64 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Gene3D G3DSA:3.30.559.30 257 502 1.5E-129 T 14-10-2018 Atu3675 d754628aa9d35f77be9b8c0f1adb52ba 1520 Pfam PF00668 Condensation domain 79 516 1.2E-93 T 14-10-2018 IPR001242 Condensation domain Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 Pfam PF01614 Bacterial transcriptional regulator 141 252 3.1E-16 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 SUPERFAMILY SSF46785 12 81 1.32E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 SMART SM00346 9 99 2.0E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 SUPERFAMILY SSF55781 81 255 2.16E-26 T 14-10-2018 Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 Pfam PF09339 IclR helix-turn-helix domain 12 60 1.4E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 Gene3D G3DSA:3.30.450.40 82 256 5.2E-33 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4599 b89155ad5e6db5cd75111d7a51548f71 256 Gene3D G3DSA:1.10.10.10 10 81 1.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4831 66f0bdb043404d7022fd5b6ee6987c7c 129 Pfam PF09722 Protein of unknown function (DUF2384) 82 128 2.6E-5 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 Atu4831 66f0bdb043404d7022fd5b6ee6987c7c 129 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 18 125 3.0E-57 T 14-10-2018 IPR020358 Uncharacterised protein family Y4oB Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 6 403 7.6E-118 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 SUPERFAMILY SSF55031 209 325 1.57E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 Gene3D G3DSA:3.40.630.10 15 399 1.8E-139 T 14-10-2018 Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 Pfam PF01546 Peptidase family M20/M25/M40 77 402 3.9E-39 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 Pfam PF07687 Peptidase dimerisation domain 208 301 3.9E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 SUPERFAMILY SSF53187 2 405 3.55E-91 T 14-10-2018 Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 PIRSF PIRSF001235 2 408 8.2E-122 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Atu2385 c69ea4bf709344bca6f79653c31e0f50 409 Gene3D G3DSA:3.30.70.360 209 323 1.8E-139 T 14-10-2018 Atu4017 1ae28e018029b4292149aacef870e9bd 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 324 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu4017 1ae28e018029b4292149aacef870e9bd 443 SUPERFAMILY SSF103473 23 435 2.88E-64 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4017 1ae28e018029b4292149aacef870e9bd 443 Pfam PF00083 Sugar (and other) transporter 33 227 1.1E-25 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu4017 1ae28e018029b4292149aacef870e9bd 443 Pfam PF00083 Sugar (and other) transporter 241 438 5.4E-12 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu4017 1ae28e018029b4292149aacef870e9bd 443 Gene3D G3DSA:1.20.1250.20 23 443 6.6E-67 T 14-10-2018 Atu4017 1ae28e018029b4292149aacef870e9bd 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu0785 1e09aa60a1ff77388d6aa9f937f3429b 199 Gene3D G3DSA:3.40.630.30 13 189 6.9E-42 T 14-10-2018 Atu0785 1e09aa60a1ff77388d6aa9f937f3429b 199 Pfam PF13302 Acetyltransferase (GNAT) domain 20 162 1.4E-17 T 14-10-2018 IPR000182 GNAT domain Atu0785 1e09aa60a1ff77388d6aa9f937f3429b 199 SUPERFAMILY SSF55729 13 186 7.22E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0886 c9d96174ef3a0d5748aad493debea524 188 Gene3D G3DSA:3.40.50.880 1 188 3.6E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0886 c9d96174ef3a0d5748aad493debea524 188 Pfam PF01965 DJ-1/PfpI family 3 167 5.2E-29 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu0886 c9d96174ef3a0d5748aad493debea524 188 SUPERFAMILY SSF52317 1 169 1.92E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3063 df46e894c5c61d9cd3a74eebea422c9b 317 SUPERFAMILY SSF53822 32 312 4.86E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3063 df46e894c5c61d9cd3a74eebea422c9b 317 Gene3D G3DSA:3.40.50.2300 52 297 7.4E-84 T 14-10-2018 Atu3063 df46e894c5c61d9cd3a74eebea422c9b 317 Pfam PF13407 Periplasmic binding protein domain 40 291 8.1E-55 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3063 df46e894c5c61d9cd3a74eebea422c9b 317 Gene3D G3DSA:3.40.50.2300 133 308 7.4E-84 T 14-10-2018 Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 Pfam PF12833 Helix-turn-helix domain 175 249 1.5E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 Pfam PF12852 Cupin 56 138 1.9E-10 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 Gene3D G3DSA:1.10.10.60 158 254 2.8E-18 T 14-10-2018 Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 SUPERFAMILY SSF46689 159 202 1.39E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 SMART SM00342 169 251 6.4E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 SUPERFAMILY SSF46689 205 251 6.72E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5141 45bd057e61ff14d32fdbff117d7150b2 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu0090 3d80d2fc9a012f451bbc65093e96ec2d 198 SUPERFAMILY SSF75420 10 95 2.35E-22 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Atu0090 3d80d2fc9a012f451bbc65093e96ec2d 198 Gene3D G3DSA:3.30.300.70 12 92 7.6E-18 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Atu0090 3d80d2fc9a012f451bbc65093e96ec2d 198 Pfam PF02576 RimP N-terminal domain 23 95 2.8E-26 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Atu0090 3d80d2fc9a012f451bbc65093e96ec2d 198 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 18 169 21.821 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Atu0090 3d80d2fc9a012f451bbc65093e96ec2d 198 Pfam PF17384 RimP C-terminal SH3 domain 98 168 6.5E-22 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Atu0090 3d80d2fc9a012f451bbc65093e96ec2d 198 SUPERFAMILY SSF74942 96 170 1.7E-14 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Atu0038 6187549cbafb3b19438b3b554c9b9745 107 Gene3D G3DSA:1.10.287.1080 3 94 2.8E-28 T 14-10-2018 Atu0038 6187549cbafb3b19438b3b554c9b9745 107 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 89 2.5E-29 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Atu0038 6187549cbafb3b19438b3b554c9b9745 107 SUPERFAMILY SSF101386 6 93 4.67E-24 T 14-10-2018 Atu0038 6187549cbafb3b19438b3b554c9b9745 107 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 92 8.7E-17 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Atu0038 6187549cbafb3b19438b3b554c9b9745 107 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 3 89 20.07 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Atu5448 5a846723aee9994506543ea926bc67ce 86 Gene3D G3DSA:2.20.140.10 1 83 3.5E-12 T 14-10-2018 IPR036930 WGR domain superfamily Atu5448 5a846723aee9994506543ea926bc67ce 86 SMART SM00773 6 84 2.6E-28 T 14-10-2018 IPR008893 WGR domain Atu5448 5a846723aee9994506543ea926bc67ce 86 Pfam PF05406 WGR domain 6 80 2.9E-26 T 14-10-2018 IPR008893 WGR domain Atu5448 5a846723aee9994506543ea926bc67ce 86 SUPERFAMILY SSF142921 4 80 1.26E-24 T 14-10-2018 IPR036930 WGR domain superfamily Atu2481 dc73e32c3f13d91431c5e774054f911c 268 Pfam PF07859 alpha/beta hydrolase fold 34 235 1.6E-35 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Atu2481 dc73e32c3f13d91431c5e774054f911c 268 SUPERFAMILY SSF53474 27 240 7.36E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2481 dc73e32c3f13d91431c5e774054f911c 268 Gene3D G3DSA:3.40.50.1820 2 241 4.6E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 4.6E-53 T 14-10-2018 Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 SUPERFAMILY SSF51735 7 255 2.94E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3074 eb37ffb28f0b3a856d0101c3c4744088 257 Gene3D G3DSA:3.40.50.720 2 256 1.6E-74 T 14-10-2018 Atu5014 69c34298e1b1f9724710889b8d00b1b1 137 Gene3D G3DSA:3.40.50.1010 1 137 3.8E-31 T 14-10-2018 Atu5014 69c34298e1b1f9724710889b8d00b1b1 137 SUPERFAMILY SSF88723 2 135 9.25E-24 T 14-10-2018 IPR029060 PIN-like domain superfamily Atu5014 69c34298e1b1f9724710889b8d00b1b1 137 Pfam PF01850 PIN domain 2 120 5.3E-12 T 14-10-2018 IPR002716 PIN domain Atu5014 69c34298e1b1f9724710889b8d00b1b1 137 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 134 9.971 T 14-10-2018 IPR022907 VapC family GO:0004540 Atu5508 8c59f4dafb3f0c5990df8829dd9d03c3 232 SUPERFAMILY SSF47616 84 232 7.48E-74 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu5508 8c59f4dafb3f0c5990df8829dd9d03c3 232 Gene3D G3DSA:1.20.1050.10 88 232 1.6E-60 T 14-10-2018 Atu5508 8c59f4dafb3f0c5990df8829dd9d03c3 232 SUPERFAMILY SSF52833 1 82 4.88E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu5508 8c59f4dafb3f0c5990df8829dd9d03c3 232 Gene3D G3DSA:3.40.30.10 1 87 4.2E-46 T 14-10-2018 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 2.9E-86 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 428 42.248 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 Pfam PF00815 Histidinol dehydrogenase 23 428 1.0E-169 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 2.2E-162 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 Gene3D G3DSA:3.40.50.1980 234 350 3.0E-126 T 14-10-2018 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 Gene3D G3DSA:3.40.50.1980 31 232 3.0E-126 T 14-10-2018 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 PIRSF PIRSF000099 2 430 5.4E-166 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Atu0537 4992790fff9f87dc1a40aecdd3b4c8c4 432 SUPERFAMILY SSF53720 26 429 3.73E-83 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu0041 4299e8e1258fa214bebfb4feb0a5b33d 216 Gene3D G3DSA:3.40.50.880 1 215 1.1E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0041 4299e8e1258fa214bebfb4feb0a5b33d 216 PIRSF PIRSF000495 1 216 5.5E-66 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Atu0041 4299e8e1258fa214bebfb4feb0a5b33d 216 SUPERFAMILY SSF52317 3 205 2.87E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0041 4299e8e1258fa214bebfb4feb0a5b33d 216 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 213 3.5E-59 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Atu0041 4299e8e1258fa214bebfb4feb0a5b33d 216 Pfam PF00117 Glutamine amidotransferase class-I 14 211 7.0E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu0041 4299e8e1258fa214bebfb4feb0a5b33d 216 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 214 33.307 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Atu4045 3c4890bbc236faabb2b4089d1ae0fcac 295 SUPERFAMILY SSF161098 95 279 1.83E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu4045 3c4890bbc236faabb2b4089d1ae0fcac 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 274 4.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4045 3c4890bbc236faabb2b4089d1ae0fcac 295 Gene3D G3DSA:1.10.3720.10 93 282 1.9E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 SUPERFAMILY SSF46689 280 330 8.06E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 Gene3D G3DSA:1.10.10.60 225 331 1.1E-21 T 14-10-2018 Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 Pfam PF12833 Helix-turn-helix domain 250 327 1.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 323 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 Pfam PF01965 DJ-1/PfpI family 96 189 8.6E-13 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 Gene3D G3DSA:3.40.50.880 15 217 1.7E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 SUPERFAMILY SSF52317 18 210 2.08E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5390 b371f4b4b28ead5133a86fa952b9a5c1 337 SMART SM00342 244 327 6.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu2380 2a880b5dc4a39b8f382fe90b4d621192 133 Gene3D G3DSA:1.10.490.10 1 133 3.0E-46 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atu2380 2a880b5dc4a39b8f382fe90b4d621192 133 SUPERFAMILY SSF46458 7 128 3.7E-32 T 14-10-2018 IPR009050 Globin-like superfamily Atu2380 2a880b5dc4a39b8f382fe90b4d621192 133 Pfam PF01152 Bacterial-like globin 7 127 2.0E-47 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Atu0998 c32705f8e6ffd2731785021ec49052cb 278 Pfam PF02673 Bacitracin resistance protein BacA 9 264 1.1E-79 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atu0998 c32705f8e6ffd2731785021ec49052cb 278 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 262 1.8E-77 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atu0998 c32705f8e6ffd2731785021ec49052cb 278 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 3 269 17.039 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atu0359 a02e8e30befc69822dce9a880cdbe126 380 Pfam PF00571 CBS domain 199 245 5.1E-4 T 14-10-2018 IPR000644 CBS domain Atu0359 a02e8e30befc69822dce9a880cdbe126 380 Pfam PF00571 CBS domain 94 151 7.0E-6 T 14-10-2018 IPR000644 CBS domain Atu0359 a02e8e30befc69822dce9a880cdbe126 380 Gene3D G3DSA:3.30.465.10 258 353 2.8E-22 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu0359 a02e8e30befc69822dce9a880cdbe126 380 SMART SM01091 263 346 1.3E-19 T 14-10-2018 IPR005170 Transporter-associated domain Atu0359 a02e8e30befc69822dce9a880cdbe126 380 Gene3D G3DSA:3.10.580.10 74 178 3.7E-23 T 14-10-2018 Atu0359 a02e8e30befc69822dce9a880cdbe126 380 SUPERFAMILY SSF56176 264 352 2.04E-16 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu0359 a02e8e30befc69822dce9a880cdbe126 380 Pfam PF03471 Transporter associated domain 266 344 3.6E-16 T 14-10-2018 IPR005170 Transporter-associated domain Atu0359 a02e8e30befc69822dce9a880cdbe126 380 Gene3D G3DSA:3.90.1280.20 192 257 1.2E-23 T 14-10-2018 Atu0359 a02e8e30befc69822dce9a880cdbe126 380 SUPERFAMILY SSF54631 88 264 5.37E-31 T 14-10-2018 Atu6110 2a063ae429946cdad13ab1f00099ed9c 308 Pfam PF08401 Domain of unknown function (DUF1738) 11 130 4.0E-36 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 Atu6110 2a063ae429946cdad13ab1f00099ed9c 308 PIRSF PIRSF037112 1 308 9.5E-110 T 14-10-2018 IPR017113 Antirestriction, ArdC Atu2488 0dee8d3debda8ae40228ffaa01144131 213 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 89 109 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Atu2488 0dee8d3debda8ae40228ffaa01144131 213 Gene3D G3DSA:3.40.1050.10 1 208 9.2E-67 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Atu2488 0dee8d3debda8ae40228ffaa01144131 213 SMART SM00947 32 202 1.5E-65 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Atu2488 0dee8d3debda8ae40228ffaa01144131 213 SUPERFAMILY SSF53056 4 209 3.14E-62 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Atu2488 0dee8d3debda8ae40228ffaa01144131 213 Pfam PF00484 Carbonic anhydrase 39 198 8.7E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Atu0610 f834e852141c533ada2750434952f395 385 SMART SM00382 48 231 1.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0610 f834e852141c533ada2750434952f395 385 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 54 383 5.2E-124 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Atu0610 f834e852141c533ada2750434952f395 385 Gene3D G3DSA:3.40.50.300 23 241 3.3E-67 T 14-10-2018 Atu0610 f834e852141c533ada2750434952f395 385 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0610 f834e852141c533ada2750434952f395 385 Pfam PF08402 TOBE domain 303 383 1.5E-17 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu0610 f834e852141c533ada2750434952f395 385 SUPERFAMILY SSF52540 23 263 9.05E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0610 f834e852141c533ada2750434952f395 385 Pfam PF00005 ABC transporter 40 181 3.7E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0610 f834e852141c533ada2750434952f395 385 SUPERFAMILY SSF50331 256 382 2.49E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu0610 f834e852141c533ada2750434952f395 385 Gene3D G3DSA:2.40.50.940 242 308 1.7E-10 T 14-10-2018 Atu0610 f834e852141c533ada2750434952f395 385 Gene3D G3DSA:2.40.50.140 309 355 1.7E-10 T 14-10-2018 Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 SUPERFAMILY SSF52540 191 453 6.13E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 SUPERFAMILY SSF52540 452 653 2.37E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 Gene3D G3DSA:3.40.50.300 458 629 2.7E-49 T 14-10-2018 Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 Pfam PF17191 RecG wedge domain 16 180 6.8E-8 T 14-10-2018 IPR033454 RecG, wedge domain Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 SMART SM00490 505 588 9.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 SMART SM00487 270 460 7.9E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 Gene3D G3DSA:3.40.50.300 221 450 1.1E-80 T 14-10-2018 Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 Pfam PF00270 DEAD/DEAH box helicase 275 432 2.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 Pfam PF00271 Helicase conserved C-terminal domain 474 587 3.5E-16 T 14-10-2018 IPR001650 Helicase, C-terminal Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 Gene3D G3DSA:2.40.50.140 55 152 9.0E-14 T 14-10-2018 Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 41 664 1.3E-202 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Atu1780 b70a96eb7af76e626ccc84e0f0b2eea2 701 SUPERFAMILY SSF50249 8 182 2.78E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu4362 a89e14089bb7d26ea55227d79359ed49 300 SUPERFAMILY SSF51658 22 291 5.94E-39 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4362 a89e14089bb7d26ea55227d79359ed49 300 Pfam PF01261 Xylose isomerase-like TIM barrel 27 218 5.5E-30 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4362 a89e14089bb7d26ea55227d79359ed49 300 Gene3D G3DSA:3.20.20.150 15 291 2.8E-43 T 14-10-2018 Atu0421 ad908e95a93b805f8b67596f2d4382d9 494 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 189 489 2.1E-86 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Atu0421 ad908e95a93b805f8b67596f2d4382d9 494 SUPERFAMILY SSF161098 225 481 8.37E-31 T 14-10-2018 IPR035906 MetI-like superfamily Atu0421 ad908e95a93b805f8b67596f2d4382d9 494 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 273 490 2.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0421 ad908e95a93b805f8b67596f2d4382d9 494 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 171 2.8E-49 T 14-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 Atu0421 ad908e95a93b805f8b67596f2d4382d9 494 Gene3D G3DSA:1.10.3720.10 251 492 4.3E-33 T 14-10-2018 IPR035906 MetI-like superfamily Atu1717 d408ed7f60782bac64b7769943f20b80 425 SUPERFAMILY SSF56935 19 413 1.1E-49 T 14-10-2018 Atu1717 d408ed7f60782bac64b7769943f20b80 425 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 123 335 1.5E-16 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Atu1717 d408ed7f60782bac64b7769943f20b80 425 Gene3D G3DSA:2.40.160.60 39 391 4.3E-23 T 14-10-2018 Atu5290 2cf14f831376f31e53f94f299dd5226d 301 SUPERFAMILY SSF51735 13 241 1.86E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.7E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 Gene3D G3DSA:3.40.50.720 1 301 1.4E-75 T 14-10-2018 Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 8.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 8.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 8.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5290 2cf14f831376f31e53f94f299dd5226d 301 Pfam PF00106 short chain dehydrogenase 17 217 6.6E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 SMART SM01329 9 394 1.1E-132 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 PIRSF PIRSF000108 1 404 3.6E-226 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 403 5.1E-215 T 14-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 Gene3D G3DSA:3.40.718.10 1 404 2.1E-218 T 14-10-2018 Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 SUPERFAMILY SSF53659 1 402 1.06E-152 T 14-10-2018 Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 269 288 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Atu1870 7e97a57ce40373d19f92dc6b487baee9 404 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 394 4.6E-77 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Atu0594 34ed99d3f1204beee160098ce52c9801 551 Gene3D G3DSA:2.60.40.1180 480 551 2.4E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu0594 34ed99d3f1204beee160098ce52c9801 551 SUPERFAMILY SSF51445 11 475 2.21E-134 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu0594 34ed99d3f1204beee160098ce52c9801 551 SMART SM00642 23 415 5.7E-127 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu0594 34ed99d3f1204beee160098ce52c9801 551 Pfam PF00128 Alpha amylase, catalytic domain 38 389 6.1E-90 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu0594 34ed99d3f1204beee160098ce52c9801 551 Pfam PF11941 Domain of unknown function (DUF3459) 462 546 3.0E-8 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Atu0594 34ed99d3f1204beee160098ce52c9801 551 Gene3D G3DSA:3.90.400.10 115 185 6.3E-177 T 14-10-2018 Atu0594 34ed99d3f1204beee160098ce52c9801 551 SUPERFAMILY SSF51011 478 549 2.31E-12 T 14-10-2018 Atu0594 34ed99d3f1204beee160098ce52c9801 551 Gene3D G3DSA:3.20.20.80 15 470 6.3E-177 T 14-10-2018 Atu1594 44dc8ad85e2fd9f4c43aa8bc1cd2dbc3 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 306 9.5E-45 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Atu0027 667b58f493809ea91001de3b326f226e 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 764 871 2.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0027 667b58f493809ea91001de3b326f226e 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 870 4.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0027 667b58f493809ea91001de3b326f226e 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 851 4.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0027 667b58f493809ea91001de3b326f226e 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 800 814 4.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0027 667b58f493809ea91001de3b326f226e 881 Gene3D G3DSA:3.30.565.10 722 876 1.4E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0027 667b58f493809ea91001de3b326f226e 881 SUPERFAMILY SSF55785 500 563 1.33E-6 T 14-10-2018 IPR035965 PAS domain superfamily Atu0027 667b58f493809ea91001de3b326f226e 881 SUPERFAMILY SSF47384 634 717 1.04E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0027 667b58f493809ea91001de3b326f226e 881 SUPERFAMILY SSF55874 706 871 1.44E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0027 667b58f493809ea91001de3b326f226e 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 650 717 3.0E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0027 667b58f493809ea91001de3b326f226e 881 SMART SM00387 763 873 8.5E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0027 667b58f493809ea91001de3b326f226e 881 Gene3D G3DSA:3.30.450.20 517 638 2.9E-7 T 14-10-2018 Atu0027 667b58f493809ea91001de3b326f226e 881 Pfam PF12860 PAS fold 521 633 2.1E-6 T 14-10-2018 Atu0027 667b58f493809ea91001de3b326f226e 881 Pfam PF12860 PAS fold 393 505 1.2E-9 T 14-10-2018 Atu0027 667b58f493809ea91001de3b326f226e 881 SUPERFAMILY SSF55785 371 423 4.02E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu0027 667b58f493809ea91001de3b326f226e 881 SMART SM00388 649 717 2.9E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0027 667b58f493809ea91001de3b326f226e 881 Gene3D G3DSA:1.10.287.130 639 719 1.8E-19 T 14-10-2018 Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 Gene3D G3DSA:3.40.1080.20 336 477 4.2E-39 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 494 3.7E-227 T 14-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 10 215 1.2E-30 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 Gene3D G3DSA:3.40.1080.10 8 180 7.3E-15 T 14-10-2018 Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 328 463 1.2E-40 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 SUPERFAMILY SSF100950 225 494 8.38E-84 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 SUPERFAMILY SSF100950 4 222 4.19E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu0396 4775b711c2d6b494aa4901ba3a9a1389 498 Gene3D G3DSA:3.30.750.70 229 322 1.6E-5 T 14-10-2018 Atu2474 07b4332403f344d63ff8a542a79b6098 342 SUPERFAMILY SSF81345 18 337 5.1E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu2474 07b4332403f344d63ff8a542a79b6098 342 Gene3D G3DSA:1.10.3470.10 22 342 5.9E-64 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu2474 07b4332403f344d63ff8a542a79b6098 342 Pfam PF01032 FecCD transport family 34 337 6.4E-64 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu3392 26ff6a54536380d70583f9cc999e9adf 274 Pfam PF08241 Methyltransferase domain 62 157 1.3E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu3392 26ff6a54536380d70583f9cc999e9adf 274 Gene3D G3DSA:3.40.50.150 6 268 1.8E-36 T 14-10-2018 Atu3392 26ff6a54536380d70583f9cc999e9adf 274 SUPERFAMILY SSF53335 12 268 8.74E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu5495 18067ccea6c32687470a065e3319138a 286 SUPERFAMILY SSF53474 3 284 1.93E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00412 Epoxide hydrolase signature 32 50 5.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00412 Epoxide hydrolase signature 100 113 5.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00412 Epoxide hydrolase signature 114 127 5.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00412 Epoxide hydrolase signature 261 283 5.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu5495 18067ccea6c32687470a065e3319138a 286 Pfam PF00561 alpha/beta hydrolase fold 26 143 8.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5495 18067ccea6c32687470a065e3319138a 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.4E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5495 18067ccea6c32687470a065e3319138a 286 Gene3D G3DSA:3.40.50.1820 1 285 8.7E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0045 531f844231fdc72fb2797a717310bfef 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 101 1.3E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu0045 531f844231fdc72fb2797a717310bfef 435 SMART SM01086 327 421 8.0E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu0045 531f844231fdc72fb2797a717310bfef 435 SUPERFAMILY SSF52540 6 433 2.7E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0045 531f844231fdc72fb2797a717310bfef 435 Gene3D G3DSA:1.10.8.60 327 432 3.8E-39 T 14-10-2018 Atu0045 531f844231fdc72fb2797a717310bfef 435 SMART SM00382 49 324 1.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0045 531f844231fdc72fb2797a717310bfef 435 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 435 42.633 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Atu0045 531f844231fdc72fb2797a717310bfef 435 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 327 396 1.7E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu0045 531f844231fdc72fb2797a717310bfef 435 Pfam PF07724 AAA domain (Cdc48 subfamily) 191 321 9.2E-36 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu0045 531f844231fdc72fb2797a717310bfef 435 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 435 3.2E-184 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Atu2451 4365b5972f6e3d0b17e42b62627d3d6a 194 Gene3D G3DSA:1.10.530.10 33 191 8.3E-17 T 14-10-2018 Atu2451 4365b5972f6e3d0b17e42b62627d3d6a 194 Pfam PF01464 Transglycosylase SLT domain 46 158 6.8E-5 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu2451 4365b5972f6e3d0b17e42b62627d3d6a 194 SUPERFAMILY SSF53955 6 165 3.11E-21 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu5270 7b3d11f9ffd82e30afda1710e3b309cc 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 161 1.7E-22 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu3793 5e468a16b56e87476a4142255c5e8a84 481 Pfam PF10415 Fumarase C C-terminus 413 465 3.9E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 Pfam PF00206 Lyase 16 347 6.5E-94 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Atu3793 5e468a16b56e87476a4142255c5e8a84 481 Gene3D G3DSA:1.10.40.30 413 464 3.2E-18 T 14-10-2018 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 Gene3D G3DSA:1.10.275.10 6 144 6.0E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Atu3793 5e468a16b56e87476a4142255c5e8a84 481 Gene3D G3DSA:1.20.200.10 145 412 7.1E-107 T 14-10-2018 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00149 Fumarate lyase superfamily signature 140 158 4.7E-27 T 14-10-2018 IPR000362 Fumarate lyase family Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 4.7E-27 T 14-10-2018 IPR000362 Fumarate lyase family Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 4.7E-27 T 14-10-2018 IPR000362 Fumarate lyase family Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 4.7E-27 T 14-10-2018 IPR000362 Fumarate lyase family Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00145 Argininosuccinate lyase family signature 322 338 6.3E-5 T 14-10-2018 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00145 Argininosuccinate lyase family signature 180 200 6.3E-5 T 14-10-2018 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 PRINTS PR00145 Argininosuccinate lyase family signature 139 161 6.3E-5 T 14-10-2018 Atu3793 5e468a16b56e87476a4142255c5e8a84 481 SUPERFAMILY SSF48557 8 463 4.08E-145 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu4648 8f19e99744aa066dd9ec365e0951151d 503 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 14-10-2018 IPR024607 Sulfatase, conserved site Atu4648 8f19e99744aa066dd9ec365e0951151d 503 Pfam PF00884 Sulfatase 4 345 7.7E-47 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Atu4648 8f19e99744aa066dd9ec365e0951151d 503 SUPERFAMILY SSF53649 3 477 4.07E-108 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atu4648 8f19e99744aa066dd9ec365e0951151d 503 Gene3D G3DSA:3.40.720.10 3 458 4.7E-105 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atu4648 8f19e99744aa066dd9ec365e0951151d 503 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 3 500 5.7E-270 T 14-10-2018 IPR017785 Choline-sulfatase Atu4648 8f19e99744aa066dd9ec365e0951151d 503 Pfam PF12411 Choline sulfatase enzyme C terminal 448 499 4.2E-23 T 14-10-2018 IPR025863 Choline sulfatase enzyme C-terminal domain Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 SUPERFAMILY SSF53850 91 294 5.07E-38 T 14-10-2018 Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 Gene3D G3DSA:3.40.190.10 92 288 2.7E-49 T 14-10-2018 Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 Pfam PF03466 LysR substrate binding domain 89 291 1.6E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 SUPERFAMILY SSF46785 3 87 1.3E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.7E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 Gene3D G3DSA:1.10.10.10 3 89 2.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3978 4957cc5fb0b362e3dad86857facf80b0 299 Gene3D G3DSA:3.40.190.10 164 262 2.7E-49 T 14-10-2018 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 SUPERFAMILY SSF100879 257 356 1.96E-27 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Gene3D G3DSA:3.30.1490.100 259 361 8.7E-28 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Hamap MF_01113 DNA polymerase IV [dinB]. 20 364 34.889 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Pfam PF00817 impB/mucB/samB family 26 172 7.2E-46 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Gene3D G3DSA:3.30.70.270 23 182 2.8E-51 T 14-10-2018 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Gene3D G3DSA:2.30.40.20 40 90 2.8E-51 T 14-10-2018 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Gene3D G3DSA:1.10.150.20 184 254 1.7E-14 T 14-10-2018 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 SUPERFAMILY SSF56672 22 252 9.78E-80 T 14-10-2018 Atu1294 0cd76cf2fe012aea6b6db310659aa10b 405 Pfam PF11799 impB/mucB/samB family C-terminal domain 256 358 4.6E-18 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 12 241 2.9E-61 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 ProSitePatterns PS01218 TatC family signature. 169 188 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Atu1704 22a053260f277e1fc27ed5ff0912533a 267 Pfam PF00902 Sec-independent protein translocase protein (TatC) 14 236 4.1E-66 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 253 16.539 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 11 38 3.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 112 138 3.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 94 112 3.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu1704 22a053260f277e1fc27ed5ff0912533a 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 169 197 3.6E-43 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Atu4742 91f957915a509639502fd30e6b724da1 107 Gene3D G3DSA:1.25.40.10 1 105 7.2E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu4742 91f957915a509639502fd30e6b724da1 107 SUPERFAMILY SSF48452 5 72 1.63E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu4742 91f957915a509639502fd30e6b724da1 107 SMART SM00028 50 83 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4742 91f957915a509639502fd30e6b724da1 107 SMART SM00028 16 49 0.0057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu4742 91f957915a509639502fd30e6b724da1 107 Pfam PF13432 Tetratricopeptide repeat 21 77 1.9E-11 T 14-10-2018 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 319 331 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 SMART SM01086 670 764 6.5E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Gene3D G3DSA:1.10.1780.10 4 144 9.9E-40 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 5 751 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Gene3D G3DSA:1.10.8.60 368 455 5.9E-30 T 14-10-2018 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 508 526 1.1E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 550 568 1.1E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 579 597 1.1E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 626 1.1E-36 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 672 750 2.2E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 535 553 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Gene3D G3DSA:1.10.8.60 670 763 3.1E-29 T 14-10-2018 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 SUPERFAMILY SSF52540 454 745 2.29E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 SUPERFAMILY SSF52540 184 432 9.4E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 SMART SM00382 223 369 2.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 SMART SM00382 504 672 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 SUPERFAMILY SSF81923 4 143 1.2E-55 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Gene3D G3DSA:3.40.50.300 174 367 7.4E-65 T 14-10-2018 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 63 3.0E-12 T 14-10-2018 IPR004176 Clp, N-terminal Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Pfam PF07724 AAA domain (Cdc48 subfamily) 503 664 8.1E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 228 359 6.8E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu1364 f3d17addfba7c4d2baad44fe3eb1e2a2 836 Gene3D G3DSA:3.40.50.300 456 668 6.8E-77 T 14-10-2018 Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 Gene3D G3DSA:3.40.50.150 73 272 4.3E-42 T 14-10-2018 Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 Gene3D G3DSA:3.40.50.720 326 429 6.4E-42 T 14-10-2018 Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 Pfam PF13489 Methyltransferase domain 97 253 1.2E-14 T 14-10-2018 Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 Pfam PF08421 Putative zinc binding domain 20 81 7.0E-24 T 14-10-2018 IPR013630 Methyltransferase putative zinc binding domain Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 Gene3D G3DSA:2.20.25.520 10 71 2.7E-17 T 14-10-2018 IPR038576 Methyltransferase putative zinc binding domain superfamily Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 Pfam PF08484 C-methyltransferase C-terminal domain 260 418 2.6E-65 T 14-10-2018 IPR013691 C-methyltransferase Atu4798 45d35f569ac8e23fdeeaffefb7e13be3 430 SUPERFAMILY SSF53335 74 266 1.55E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 Gene3D G3DSA:3.40.190.10 92 292 2.0E-51 T 14-10-2018 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 SUPERFAMILY SSF46785 4 87 2.04E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 Gene3D G3DSA:3.40.190.10 163 266 2.0E-51 T 14-10-2018 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 SUPERFAMILY SSF53850 88 299 7.96E-40 T 14-10-2018 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 Pfam PF03466 LysR substrate binding domain 88 295 1.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5184 a319a28b31cdf3e0c03bcdb6623b4c53 309 Gene3D G3DSA:1.10.10.10 3 88 6.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3595 6a463a8e4dce553ef41b77caf79ffc3e 248 Pfam PF01012 Electron transfer flavoprotein domain 29 206 1.1E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Atu3595 6a463a8e4dce553ef41b77caf79ffc3e 248 PIRSF PIRSF000090 1 248 2.5E-88 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Atu3595 6a463a8e4dce553ef41b77caf79ffc3e 248 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Atu3595 6a463a8e4dce553ef41b77caf79ffc3e 248 Gene3D G3DSA:3.40.50.620 1 248 4.5E-91 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3595 6a463a8e4dce553ef41b77caf79ffc3e 248 SMART SM00893 23 211 1.5E-71 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Atu3595 6a463a8e4dce553ef41b77caf79ffc3e 248 SUPERFAMILY SSF52402 1 242 5.09E-89 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 Gene3D G3DSA:3.50.30.20 12 163 3.7E-48 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 14 145 3.2E-44 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 208 222 1.4E-36 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 295 1.4E-36 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 296 313 1.4E-36 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 247 261 1.4E-36 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 321 332 1.4E-36 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 SUPERFAMILY SSF52317 190 393 1.51E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 SMART SM01097 12 146 1.1E-74 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 SUPERFAMILY SSF52021 13 159 6.93E-49 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00097 Anthranilate synthase component II signature 279 290 2.7E-6 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00097 Anthranilate synthase component II signature 250 259 2.7E-6 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00097 Anthranilate synthase component II signature 364 377 2.7E-6 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 Pfam PF00117 Glutamine amidotransferase class-I 210 387 7.9E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 12 393 45.158 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 259 8.0E-12 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 279 290 8.0E-12 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 PRINTS PR00096 Glutamine amidotransferase superfamily signature 364 377 8.0E-12 T 14-10-2018 Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 Gene3D G3DSA:3.40.50.880 167 393 3.9E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2170 95bf910fceb230c025e53f579c8ce2a3 401 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 14 390 3.3E-125 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 Gene3D G3DSA:2.40.500.20 91 199 1.3E-35 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 Gene3D G3DSA:1.10.287.990 21 90 9.8E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.0E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.0E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.0E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 1.0E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 1.0E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 100 198 3.5E-32 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 PIRSF PIRSF000349 1 199 2.2E-74 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 SUPERFAMILY SSF46609 1 91 1.83E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 SUPERFAMILY SSF54719 93 199 4.58E-36 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4583 f971eca02b8ee8dfa43a940092ba817c 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 4.0E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu2431 272b20802cdfea37ec11a4dc95ff1213 93 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 3.4E-23 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase Atu2431 272b20802cdfea37ec11a4dc95ff1213 93 SUPERFAMILY SSF55729 3 91 8.11E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2431 272b20802cdfea37ec11a4dc95ff1213 93 Gene3D G3DSA:3.40.630.30 7 92 9.3E-22 T 14-10-2018 Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 Gene3D G3DSA:1.10.10.10 3 88 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 Pfam PF03466 LysR substrate binding domain 89 293 6.8E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 Gene3D G3DSA:3.40.190.10 91 291 8.1E-59 T 14-10-2018 Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 Gene3D G3DSA:3.40.190.10 163 266 8.1E-59 T 14-10-2018 Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 SUPERFAMILY SSF46785 6 85 1.21E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5215 b82c67158a02b9ac550c1ad3af52f228 313 SUPERFAMILY SSF53850 90 297 1.81E-39 T 14-10-2018 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 1.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 1.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 Gene3D G3DSA:3.40.50.1820 2 256 1.1E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 Pfam PF00561 alpha/beta hydrolase fold 14 119 8.0E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 255 4.3E-127 T 14-10-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.664 T 14-10-2018 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 Atu2497 742ed21aeb0c351a7b4b820f2b0a7130 261 SUPERFAMILY SSF53474 1 255 7.65E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 SUPERFAMILY SSF51338 16 417 3.88E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 TIGRFAM TIGR01224 hutI: imidazolonepropionase 38 415 2.7E-139 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 Pfam PF01979 Amidohydrolase family 76 394 2.3E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 Gene3D G3DSA:2.30.40.10 21 414 3.1E-173 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 Gene3D G3DSA:3.20.20.140 79 377 3.1E-173 T 14-10-2018 Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 SUPERFAMILY SSF51556 78 378 3.28E-87 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3934 bb3c934af9b7eb25757f836c24b3faae 419 Hamap MF_00372 Imidazolonepropionase [hutI]. 16 417 42.763 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu2177 02401189061106d572c42ce3b1122c52 211 SMART SM00850 109 205 1.8E-16 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Atu2177 02401189061106d572c42ce3b1122c52 211 PIRSF PIRSF031737 1 211 6.9E-100 T 14-10-2018 IPR012362 LytTR transmembrane transcriptional regulator, putative Atu2177 02401189061106d572c42ce3b1122c52 211 Pfam PF04397 LytTr DNA-binding domain 119 203 4.3E-12 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Atu2066 de1d0f0a79a963a4cf7a9b6b94604cbe 208 SUPERFAMILY SSF52499 2 207 2.09E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu2066 de1d0f0a79a963a4cf7a9b6b94604cbe 208 Gene3D G3DSA:3.40.50.850 1 208 8.9E-68 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu2066 de1d0f0a79a963a4cf7a9b6b94604cbe 208 Pfam PF00857 Isochorismatase family 3 203 2.3E-27 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu2258 78c61346b36ac64f02d07fe1dd810d26 137 Gene3D G3DSA:3.40.630.30 33 137 5.5E-26 T 14-10-2018 Atu2258 78c61346b36ac64f02d07fe1dd810d26 137 SUPERFAMILY SSF55729 12 133 2.53E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2258 78c61346b36ac64f02d07fe1dd810d26 137 Pfam PF13673 Acetyltransferase (GNAT) domain 44 120 6.5E-10 T 14-10-2018 IPR000182 GNAT domain Atu2258 78c61346b36ac64f02d07fe1dd810d26 137 Gene3D G3DSA:1.20.5.540 2 32 4.9E-24 T 14-10-2018 Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 SUPERFAMILY SSF53187 3 372 8.91E-81 T 14-10-2018 Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 3 359 5.8E-109 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 PIRSF PIRSF005962 1 374 2.1E-119 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 Pfam PF07687 Peptidase dimerisation domain 174 269 9.4E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 Gene3D G3DSA:3.30.70.360 170 284 2.9E-132 T 14-10-2018 Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 SUPERFAMILY SSF55031 173 285 5.63E-33 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 Gene3D G3DSA:3.40.630.10 3 357 2.9E-132 T 14-10-2018 Atu4444 9b131dfdc0f1465cd5148abd2087af30 374 Pfam PF01546 Peptidase family M20/M25/M40 62 369 2.4E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu1819 e9f4f02bcb34cdf6220f41df260bb29a 129 SUPERFAMILY SSF89360 5 100 7.85E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atu1819 e9f4f02bcb34cdf6220f41df260bb29a 129 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 4 111 1.0E-47 T 14-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 Atu1819 e9f4f02bcb34cdf6220f41df260bb29a 129 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 107 1.5E-17 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Atu1819 e9f4f02bcb34cdf6220f41df260bb29a 129 Gene3D G3DSA:2.60.300.12 5 111 1.4E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atu1819 e9f4f02bcb34cdf6220f41df260bb29a 129 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 109 2.2E-31 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 SUPERFAMILY SSF51735 5 161 8.2E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 120 6.6E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 Gene3D G3DSA:3.30.360.10 148 345 5.9E-42 T 14-10-2018 Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 Gene3D G3DSA:3.40.50.720 2 147 6.4E-37 T 14-10-2018 Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 Gene3D G3DSA:3.20.20.100 376 667 6.3E-61 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 SUPERFAMILY SSF51430 379 667 1.7E-57 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 Pfam PF00248 Aldo/keto reductase family 389 665 6.0E-46 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu3147 f70c33965dd715fb55c1175b64fc0faf 667 SUPERFAMILY SSF55347 130 307 3.11E-35 T 14-10-2018 Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 Pfam PF00411 Ribosomal protein S11 19 128 9.9E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 SUPERFAMILY SSF53137 14 129 2.16E-49 T 14-10-2018 Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 33.466 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 PIRSF PIRSF002131 1 129 8.6E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.2E-57 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1924 0929c5957c3af89ba1573b23ccbadd52 129 Gene3D G3DSA:3.30.420.80 1 129 4.4E-55 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Atu4257 92c313b2925f671dc51bdf917757520d 338 SUPERFAMILY SSF161098 135 319 6.0E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu4257 92c313b2925f671dc51bdf917757520d 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 336 2.4E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4257 92c313b2925f671dc51bdf917757520d 338 Gene3D G3DSA:1.10.3720.10 133 334 3.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu1277 6b3366c54dac5f2bbdc4f17ca43014ac 348 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 344 24.064 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1277 6b3366c54dac5f2bbdc4f17ca43014ac 348 Pfam PF00146 NADH dehydrogenase 20 337 6.1E-119 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1277 6b3366c54dac5f2bbdc4f17ca43014ac 348 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 225 238 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 Pfam PF00795 Carbon-nitrogen hydrolase 12 250 1.1E-24 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 Gene3D G3DSA:3.40.50.620 274 559 1.1E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1657 18d7f5a947a557fc12aa4290523d121e 559 TIGRFAM TIGR00552 nadE: NAD+ synthetase 284 538 1.8E-61 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 SUPERFAMILY SSF52402 270 542 5.59E-75 T 14-10-2018 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 PIRSF PIRSF006630 8 267 5.8E-68 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 PIRSF PIRSF006630 262 559 7.1E-111 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 11 558 28.142 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Atu1657 18d7f5a947a557fc12aa4290523d121e 559 Gene3D G3DSA:3.60.110.10 7 270 3.4E-77 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu1657 18d7f5a947a557fc12aa4290523d121e 559 SUPERFAMILY SSF56317 9 250 1.02E-57 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu1657 18d7f5a947a557fc12aa4290523d121e 559 Pfam PF02540 NAD synthase 280 532 3.0E-72 T 14-10-2018 IPR022310 NAD/GMP synthase Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 Gene3D G3DSA:1.10.10.10 163 226 8.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 166 220 3.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 SUPERFAMILY SSF46894 157 226 2.01E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 SMART SM00421 163 220 2.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 2.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 2.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0524 fc4cd6980f7e5df24e91ee11d0b7bc35 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 2.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu1984 b233af4630de7528673d1494dd093195 346 SUPERFAMILY SSF55874 248 343 1.31E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1984 b233af4630de7528673d1494dd093195 346 Pfam PF13581 Histidine kinase-like ATPase domain 238 305 1.1E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1984 b233af4630de7528673d1494dd093195 346 Pfam PF07568 Histidine kinase 151 225 9.5E-20 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Atu1984 b233af4630de7528673d1494dd093195 346 Gene3D G3DSA:3.30.565.10 207 346 1.7E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu1984 b233af4630de7528673d1494dd093195 346 SMART SM00448 4 118 8.2E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1984 b233af4630de7528673d1494dd093195 346 SMART SM00387 246 346 3.6E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1984 b233af4630de7528673d1494dd093195 346 Pfam PF00072 Response regulator receiver domain 6 108 1.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1984 b233af4630de7528673d1494dd093195 346 Gene3D G3DSA:3.40.50.2300 3 158 4.8E-28 T 14-10-2018 Atu1984 b233af4630de7528673d1494dd093195 346 SUPERFAMILY SSF52172 4 142 2.7E-27 T 14-10-2018 IPR011006 CheY-like superfamily Atu3979 4a7b9957e1955220820f4b25a320a105 310 SUPERFAMILY SSF54593 4 283 2.79E-44 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3979 4a7b9957e1955220820f4b25a320a105 310 Gene3D G3DSA:3.10.180.10 6 305 6.8E-104 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3979 4a7b9957e1955220820f4b25a320a105 310 Gene3D G3DSA:3.10.180.10 67 212 6.8E-104 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3979 4a7b9957e1955220820f4b25a320a105 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 268 2.5E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu5223 c6b29448e6fcb324b2977b51187492b7 202 Pfam PF06684 Amino acid synthesis 9 183 4.7E-65 T 14-10-2018 IPR009569 Amino acid synthesis, putative Atu5223 c6b29448e6fcb324b2977b51187492b7 202 SUPERFAMILY SSF160519 7 196 3.01E-68 T 14-10-2018 IPR035936 BB2672 superfamily Atu5223 c6b29448e6fcb324b2977b51187492b7 202 Gene3D G3DSA:3.30.1330.110 3 197 3.0E-64 T 14-10-2018 IPR035936 BB2672 superfamily Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 463 474 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Gene3D G3DSA:3.50.30.10 398 522 7.2E-74 T 14-10-2018 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 SUPERFAMILY SSF51621 524 883 3.18E-129 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 PIRSF PIRSF000853 1 892 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 774 792 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Gene3D G3DSA:3.30.1490.20 15 246 1.7E-94 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 311 371 9.9E-11 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 298 2.7E-44 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Gene3D G3DSA:3.20.20.60 545 887 2.1E-146 T 14-10-2018 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Pfam PF00391 PEP-utilising enzyme, mobile domain 436 516 1.9E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Gene3D G3DSA:1.10.189.10 360 542 7.2E-74 T 14-10-2018 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 530 882 4.0E-88 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Gene3D G3DSA:1.20.80.30 114 201 1.7E-94 T 14-10-2018 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 Gene3D G3DSA:3.30.470.20 247 356 1.5E-39 T 14-10-2018 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 884 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 SUPERFAMILY SSF56059 1 393 2.35E-139 T 14-10-2018 Atu0803 e3ab20d616320a34416cb4a14b4e2e02 908 SUPERFAMILY SSF52009 403 525 1.44E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Atu1921 50b0346552857034ad964c3b8e797927 290 Pfam PF05675 Protein of unknown function (DUF817) 37 273 2.1E-100 T 14-10-2018 IPR008535 Protein of unknown function DUF817 Atu1921 50b0346552857034ad964c3b8e797927 290 PIRSF PIRSF009141 26 290 3.4E-130 T 14-10-2018 IPR008535 Protein of unknown function DUF817 Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 Gene3D G3DSA:3.40.50.720 156 290 6.4E-105 T 14-10-2018 Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 SMART SM00829 7 341 7.9E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 Gene3D G3DSA:3.90.180.10 9 329 6.4E-105 T 14-10-2018 Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 SUPERFAMILY SSF50129 1 177 7.76E-50 T 14-10-2018 IPR011032 GroES-like superfamily Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 Pfam PF00107 Zinc-binding dehydrogenase 179 301 1.2E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 SUPERFAMILY SSF51735 142 309 7.34E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 138 4.7E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1408 23a1ff340cbc889abd863a4bbdfbd37c 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 SUPERFAMILY SSF102645 186 399 1.07E-73 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 Gene3D G3DSA:3.40.50.1950 1 184 8.2E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 Pfam PF02441 Flavoprotein 6 180 5.3E-44 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 SUPERFAMILY SSF52507 3 181 8.5E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 Gene3D G3DSA:3.40.50.10300 185 401 6.8E-74 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 5.9E-122 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Atu0316 c6c253aaa3c0ec51a50a20de3e4b9153 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 372 6.8E-70 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Atu0973 abcb23b12a5adcac43e92d1a4eae37ea 390 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 119 1.2E-36 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI Atu0973 abcb23b12a5adcac43e92d1a4eae37ea 390 Gene3D G3DSA:1.25.40.10 139 259 8.7E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0973 abcb23b12a5adcac43e92d1a4eae37ea 390 SUPERFAMILY SSF48452 143 249 4.24E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0672 ae895a9f096b613ee2985bc2155e5d29 305 Pfam PF03466 LysR substrate binding domain 88 293 1.3E-40 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0672 ae895a9f096b613ee2985bc2155e5d29 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0672 ae895a9f096b613ee2985bc2155e5d29 305 Gene3D G3DSA:1.10.10.10 1 89 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0672 ae895a9f096b613ee2985bc2155e5d29 305 Gene3D G3DSA:3.40.190.290 90 297 1.0E-39 T 14-10-2018 Atu0672 ae895a9f096b613ee2985bc2155e5d29 305 SUPERFAMILY SSF46785 1 110 3.82E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0672 ae895a9f096b613ee2985bc2155e5d29 305 SUPERFAMILY SSF53850 90 295 6.61E-37 T 14-10-2018 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 SUPERFAMILY SSF81296 26 122 1.18E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 134 217 1.1E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 639 733 2.7E-20 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 PIRSF PIRSF000463 17 735 2.1E-274 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Pfam PF00128 Alpha amylase, catalytic domain 286 358 6.7E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 118 731 1.2E-267 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Gene3D G3DSA:3.20.20.80 245 623 3.2E-160 T 14-10-2018 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 110 734 43.456 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 SUPERFAMILY SSF51445 182 627 2.97E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 SUPERFAMILY SSF51011 634 734 3.39E-29 T 14-10-2018 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 SMART SM00642 261 630 5.9E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 SUPERFAMILY SSF81296 127 230 1.75E-31 T 14-10-2018 IPR014756 Immunoglobulin E-set Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Gene3D G3DSA:2.60.40.10 14 231 1.7E-64 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu4077 517f318b98da9d3f6bb5abb73a29efdd 735 Gene3D G3DSA:2.60.40.1180 634 734 3.6E-30 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu1472 7ee83d520cc77cff388141819955032b 222 Gene3D G3DSA:3.40.50.1000 4 206 1.6E-50 T 14-10-2018 IPR023214 HAD superfamily Atu1472 7ee83d520cc77cff388141819955032b 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 187 4.1E-28 T 14-10-2018 Atu1472 7ee83d520cc77cff388141819955032b 222 Gene3D G3DSA:1.10.150.240 16 84 1.6E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu1472 7ee83d520cc77cff388141819955032b 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 181 1.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu1472 7ee83d520cc77cff388141819955032b 222 SUPERFAMILY SSF56784 1 216 1.52E-56 T 14-10-2018 IPR036412 HAD-like superfamily Atu1028 ce3a7cd39cbb3e869e18c02dadb52bb3 189 Gene3D G3DSA:3.40.50.1010 1 167 1.0E-52 T 14-10-2018 Atu1028 ce3a7cd39cbb3e869e18c02dadb52bb3 189 Pfam PF01936 NYN domain 7 164 1.0E-39 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type Atu0710 6d25156e092b039f4014159e9c0dec52 342 SUPERFAMILY SSF143865 15 280 4.58E-36 T 14-10-2018 Atu0710 6d25156e092b039f4014159e9c0dec52 342 SUPERFAMILY SSF144083 277 340 1.03E-19 T 14-10-2018 Atu0710 6d25156e092b039f4014159e9c0dec52 342 Pfam PF01544 CorA-like Mg2+ transporter protein 43 337 1.3E-53 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atu0710 6d25156e092b039f4014159e9c0dec52 342 Gene3D G3DSA:1.20.58.340 266 342 1.6E-25 T 14-10-2018 Atu1411 5615b7a17b6a892295fe3e198ab7554f 590 Pfam PF00005 ABC transporter 359 516 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1411 5615b7a17b6a892295fe3e198ab7554f 590 Gene3D G3DSA:3.40.50.300 338 588 4.0E-63 T 14-10-2018 Atu1411 5615b7a17b6a892295fe3e198ab7554f 590 SUPERFAMILY SSF52540 341 586 2.03E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1411 5615b7a17b6a892295fe3e198ab7554f 590 SMART SM00382 367 565 7.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1411 5615b7a17b6a892295fe3e198ab7554f 590 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 566 587 4.8E-10 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu1411 5615b7a17b6a892295fe3e198ab7554f 590 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 300 8.3E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5255 eb72a2d523e703c92c41fc9beba86d62 295 Gene3D G3DSA:1.10.3720.10 79 290 2.7E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu5255 eb72a2d523e703c92c41fc9beba86d62 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 12 54 4.3E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu5255 eb72a2d523e703c92c41fc9beba86d62 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 292 1.3E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5255 eb72a2d523e703c92c41fc9beba86d62 295 SUPERFAMILY SSF161098 86 278 3.79E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu4836 294f7858002f9a57902de2177f4fb3e6 225 Gene3D G3DSA:3.30.420.40 1 98 3.1E-30 T 14-10-2018 Atu4836 294f7858002f9a57902de2177f4fb3e6 225 SUPERFAMILY SSF53067 7 198 3.72E-19 T 14-10-2018 Atu4836 294f7858002f9a57902de2177f4fb3e6 225 Gene3D G3DSA:3.30.420.40 99 225 5.2E-43 T 14-10-2018 Atu4836 294f7858002f9a57902de2177f4fb3e6 225 Pfam PF00480 ROK family 8 130 3.2E-6 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 SUPERFAMILY SSF47090 1189 1243 1.05E-11 T 14-10-2018 IPR036365 PGBD-like superfamily Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Pfam PF01471 Putative peptidoglycan binding domain 1190 1243 6.6E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Pfam PF08238 Sel1 repeat 1058 1090 24.0 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Pfam PF08238 Sel1 repeat 986 1018 2.1E-4 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Pfam PF08238 Sel1 repeat 1093 1127 1.1E-5 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Pfam PF08238 Sel1 repeat 1020 1055 1.1E-6 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 SMART SM00671 1020 1055 2.4E-9 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 SMART SM00671 984 1019 9.4E-6 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 SMART SM00671 1056 1091 2.6 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 SMART SM00671 1092 1127 8.7E-8 T 14-10-2018 IPR006597 Sel1-like repeat Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Gene3D G3DSA:1.10.101.10 1183 1248 1.1E-9 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 SUPERFAMILY SSF81901 977 1131 3.84E-33 T 14-10-2018 Atu0499 b3a2078c4359c41827d2a517d98a2c03 1248 Gene3D G3DSA:1.25.40.10 969 1167 1.3E-49 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0474 44c5280138c5be0045fa58021ccd70f1 181 Pfam PF04542 Sigma-70 region 2 27 94 5.3E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu0474 44c5280138c5be0045fa58021ccd70f1 181 Pfam PF08281 Sigma-70, region 4 125 176 9.3E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu0474 44c5280138c5be0045fa58021ccd70f1 181 Gene3D G3DSA:1.10.1740.10 7 87 3.8E-24 T 14-10-2018 Atu0474 44c5280138c5be0045fa58021ccd70f1 181 SUPERFAMILY SSF88946 5 108 3.37E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu0474 44c5280138c5be0045fa58021ccd70f1 181 SUPERFAMILY SSF88659 121 180 1.22E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu0474 44c5280138c5be0045fa58021ccd70f1 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 180 6.8E-23 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu0474 44c5280138c5be0045fa58021ccd70f1 181 Gene3D G3DSA:1.10.10.10 88 181 9.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 SUPERFAMILY SSF54292 194 309 4.19E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 234 302 6.0E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 Gene3D G3DSA:3.40.50.80 70 211 5.7E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00410 Phenol hydroxylase reductase family signature 63 72 4.7E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00410 Phenol hydroxylase reductase family signature 79 98 4.7E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00410 Phenol hydroxylase reductase family signature 19 26 4.7E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00410 Phenol hydroxylase reductase family signature 172 180 4.7E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 Pfam PF00175 Oxidoreductase NAD-binding domain 80 186 5.5E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 79 98 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 127 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 19 26 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 172 180 1.1E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 SUPERFAMILY SSF52343 59 202 6.94E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 260 268 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 Gene3D G3DSA:3.10.20.30 213 310 1.2E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 Gene3D G3DSA:2.40.30.10 1 69 9.0E-14 T 14-10-2018 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 Pfam PF00970 Oxidoreductase FAD-binding domain 2 70 6.2E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Atu0727 402659aa0b6c8dda7e57b2289ff332b3 310 SUPERFAMILY SSF63380 2 68 5.96E-16 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu0375 7608455027bddef3a44b123e4efba51c 141 SUPERFAMILY SSF49764 46 137 3.84E-17 T 14-10-2018 IPR008978 HSP20-like chaperone Atu0375 7608455027bddef3a44b123e4efba51c 141 Gene3D G3DSA:2.60.40.790 33 138 2.8E-17 T 14-10-2018 IPR008978 HSP20-like chaperone Atu0375 7608455027bddef3a44b123e4efba51c 141 Pfam PF00011 Hsp20/alpha crystallin family 47 137 2.7E-16 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Atu4608 f8ff7450be36b03e0ef999903c9b0933 617 Gene3D G3DSA:3.40.50.150 39 230 6.6E-23 T 14-10-2018 Atu4608 f8ff7450be36b03e0ef999903c9b0933 617 Pfam PF13489 Methyltransferase domain 37 196 2.5E-10 T 14-10-2018 Atu4608 f8ff7450be36b03e0ef999903c9b0933 617 Gene3D G3DSA:3.90.550.10 255 495 2.2E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4608 f8ff7450be36b03e0ef999903c9b0933 617 SUPERFAMILY SSF53335 40 202 8.08E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4608 f8ff7450be36b03e0ef999903c9b0933 617 SUPERFAMILY SSF53448 263 511 4.03E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4608 f8ff7450be36b03e0ef999903c9b0933 617 Pfam PF00535 Glycosyl transferase family 2 282 383 3.6E-5 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4494 35112aa1b8a6560557af73c7d7923da3 212 SUPERFAMILY SSF51569 6 209 1.14E-65 T 14-10-2018 Atu4494 35112aa1b8a6560557af73c7d7923da3 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Atu4494 35112aa1b8a6560557af73c7d7923da3 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 209 2.1E-71 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Atu4494 35112aa1b8a6560557af73c7d7923da3 212 Gene3D G3DSA:3.20.20.70 1 211 5.6E-71 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4494 35112aa1b8a6560557af73c7d7923da3 212 Pfam PF01081 KDPG and KHG aldolase 10 203 3.0E-67 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 Pfam PF12840 Helix-turn-helix domain 9 69 3.5E-13 T 14-10-2018 Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 SMART SM00418 8 88 4.1E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 4.2E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 4.2E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 4.2E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 SUPERFAMILY SSF46785 4 93 6.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1492 2ad3e09db9f36865368cb16d32e844e1 117 Gene3D G3DSA:1.10.10.10 6 96 2.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5283 30eee6771a1b8e7f126976471c23d8ea 120 SUPERFAMILY SSF88946 1 39 4.32E-6 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu5283 30eee6771a1b8e7f126976471c23d8ea 120 Gene3D G3DSA:1.10.1740.10 1 40 1.2E-7 T 14-10-2018 Atu5283 30eee6771a1b8e7f126976471c23d8ea 120 SUPERFAMILY SSF88659 59 119 1.75E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu5283 30eee6771a1b8e7f126976471c23d8ea 120 Pfam PF08281 Sigma-70, region 4 64 115 2.4E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu5283 30eee6771a1b8e7f126976471c23d8ea 120 Gene3D G3DSA:1.10.10.10 61 120 2.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5283 30eee6771a1b8e7f126976471c23d8ea 120 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 119 7.2E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu1247 01470b2470ed6b0454906360c12a9be6 154 SUPERFAMILY SSF52161 4 144 3.92E-57 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1247 01470b2470ed6b0454906360c12a9be6 154 Pfam PF00572 Ribosomal protein L13 14 138 5.2E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Atu1247 01470b2470ed6b0454906360c12a9be6 154 Gene3D G3DSA:3.90.1180.10 1 143 2.5E-59 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1247 01470b2470ed6b0454906360c12a9be6 154 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 28.213 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Atu1247 01470b2470ed6b0454906360c12a9be6 154 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 2.8E-60 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1247 01470b2470ed6b0454906360c12a9be6 154 PIRSF PIRSF002181 1 154 4.7E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Atu2145 d45f838137e287b6bd5f1622431ae6a3 292 Gene3D G3DSA:3.40.50.10490 100 284 1.4E-27 T 14-10-2018 Atu2145 d45f838137e287b6bd5f1622431ae6a3 292 SUPERFAMILY SSF53697 101 284 5.93E-19 T 14-10-2018 Atu2145 d45f838137e287b6bd5f1622431ae6a3 292 SUPERFAMILY SSF46689 8 80 5.2E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2145 d45f838137e287b6bd5f1622431ae6a3 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 80 2.8E-16 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Atu2145 d45f838137e287b6bd5f1622431ae6a3 292 Pfam PF01380 SIS domain 133 259 5.1E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu2145 d45f838137e287b6bd5f1622431ae6a3 292 Gene3D G3DSA:1.10.10.10 4 82 4.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4225 be0fb2e62c999826592ce45d48c096fb 324 Pfam PF12833 Helix-turn-helix domain 241 320 7.1E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 Gene3D G3DSA:1.10.10.60 215 321 6.4E-28 T 14-10-2018 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 318 1.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 302 1.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 SUPERFAMILY SSF46689 271 321 2.64E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 Gene3D G3DSA:3.40.50.880 8 203 4.4E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4225 be0fb2e62c999826592ce45d48c096fb 324 Pfam PF01965 DJ-1/PfpI family 13 179 5.8E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 SUPERFAMILY SSF52317 11 196 3.44E-37 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4225 be0fb2e62c999826592ce45d48c096fb 324 SMART SM00342 235 318 3.6E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4225 be0fb2e62c999826592ce45d48c096fb 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4732 ec0315df81bcd7b529c29e3e2cc18c10 238 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 143 7.7E-23 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 Atu4732 ec0315df81bcd7b529c29e3e2cc18c10 238 Gene3D G3DSA:2.60.40.10 33 144 1.7E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu4732 ec0315df81bcd7b529c29e3e2cc18c10 238 SUPERFAMILY SSF49354 18 143 1.39E-24 T 14-10-2018 IPR008962 PapD-like superfamily Atu2034 2f9ecf546c35b2859a212afccf2fc15d 122 Gene3D G3DSA:1.10.10.10 3 112 3.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2034 2f9ecf546c35b2859a212afccf2fc15d 122 SUPERFAMILY SSF46785 8 109 5.25E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2034 2f9ecf546c35b2859a212afccf2fc15d 122 SMART SM00418 11 89 6.8E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2034 2f9ecf546c35b2859a212afccf2fc15d 122 Pfam PF12840 Helix-turn-helix domain 10 69 2.7E-15 T 14-10-2018 Atu0855 6283bd8abb65e148e9c67b9c7ad089a3 259 Gene3D G3DSA:3.10.180.10 138 259 2.3E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0855 6283bd8abb65e148e9c67b9c7ad089a3 259 Gene3D G3DSA:3.10.180.10 3 128 1.8E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0855 6283bd8abb65e148e9c67b9c7ad089a3 259 SUPERFAMILY SSF54593 8 179 1.48E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0855 6283bd8abb65e148e9c67b9c7ad089a3 259 SUPERFAMILY SSF54593 142 258 3.76E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0855 6283bd8abb65e148e9c67b9c7ad089a3 259 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 144 252 4.6E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0855 6283bd8abb65e148e9c67b9c7ad089a3 259 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 119 2.9E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 31.869 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 Gene3D G3DSA:3.90.230.10 1 250 1.6E-72 T 14-10-2018 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 Pfam PF00557 Metallopeptidase family M24 11 240 2.8E-41 T 14-10-2018 IPR000994 Peptidase M24 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.6E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 SUPERFAMILY SSF55920 2 249 7.07E-65 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu2306 2b6ceec29a371d1241be27aac2cf62c7 250 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 248 1.0E-71 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1688 4b6b24f1231f975f0626bcfb43f47dc1 271 Gene3D G3DSA:3.20.20.70 1 266 1.1E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1688 4b6b24f1231f975f0626bcfb43f47dc1 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Atu1688 4b6b24f1231f975f0626bcfb43f47dc1 271 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.188 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Atu1688 4b6b24f1231f975f0626bcfb43f47dc1 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 6.3E-96 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Atu1688 4b6b24f1231f975f0626bcfb43f47dc1 271 SUPERFAMILY SSF51366 12 262 2.47E-89 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu6008 2a6a193179386147c78a85db12230114 418 Gene3D G3DSA:3.20.20.190 42 246 9.8E-10 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu6008 2a6a193179386147c78a85db12230114 418 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 48 156 9.7E-8 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Atu6008 2a6a193179386147c78a85db12230114 418 SUPERFAMILY SSF51695 44 200 3.66E-14 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu5199 13b6367c02ab9e1bbda15fcc6da08d8a 366 SUPERFAMILY SSF51735 2 175 5.74E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5199 13b6367c02ab9e1bbda15fcc6da08d8a 366 SUPERFAMILY SSF55347 131 275 2.49E-18 T 14-10-2018 Atu5199 13b6367c02ab9e1bbda15fcc6da08d8a 366 Gene3D G3DSA:3.30.360.10 138 353 2.7E-79 T 14-10-2018 Atu5199 13b6367c02ab9e1bbda15fcc6da08d8a 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 122 1.8E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu5199 13b6367c02ab9e1bbda15fcc6da08d8a 366 Gene3D G3DSA:3.40.50.720 7 346 2.7E-79 T 14-10-2018 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 SMART SM00862 163 239 2.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 SMART SM00448 14 125 3.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 SUPERFAMILY SSF46894 141 242 1.19E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 Pfam PF00072 Response regulator receiver domain 16 125 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 239 4.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 Gene3D G3DSA:3.40.50.2300 5 131 6.7E-26 T 14-10-2018 Atu6178 903494e0a351dea0f83d71748d8b4b14 253 Gene3D G3DSA:1.10.10.10 132 244 6.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6178 903494e0a351dea0f83d71748d8b4b14 253 SUPERFAMILY SSF52172 14 137 4.13E-28 T 14-10-2018 IPR011006 CheY-like superfamily Atu3456 fabeec2440c0902a1ad3e6266d7ebe4d 252 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3456 fabeec2440c0902a1ad3e6266d7ebe4d 252 Gene3D G3DSA:3.40.50.300 3 252 3.3E-76 T 14-10-2018 Atu3456 fabeec2440c0902a1ad3e6266d7ebe4d 252 SMART SM00382 33 226 1.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3456 fabeec2440c0902a1ad3e6266d7ebe4d 252 Pfam PF00005 ABC transporter 26 170 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3456 fabeec2440c0902a1ad3e6266d7ebe4d 252 SUPERFAMILY SSF52540 5 234 8.81E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4283 6b472d5106496becf439166979165e19 254 SUPERFAMILY SSF52540 13 248 7.31E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4283 6b472d5106496becf439166979165e19 254 Gene3D G3DSA:3.40.50.300 8 253 8.7E-81 T 14-10-2018 Atu4283 6b472d5106496becf439166979165e19 254 PIRSF PIRSF039085 9 254 2.0E-108 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu4283 6b472d5106496becf439166979165e19 254 Pfam PF00005 ABC transporter 28 178 7.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4283 6b472d5106496becf439166979165e19 254 SMART SM00382 37 226 1.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4283 6b472d5106496becf439166979165e19 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1119 d2738b6c78421a8524727a8991487b4b 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 143 297 5.9E-36 T 14-10-2018 IPR000160 GGDEF domain Atu1119 d2738b6c78421a8524727a8991487b4b 320 SUPERFAMILY SSF55073 147 303 4.87E-36 T 14-10-2018 IPR029787 Nucleotide cyclase Atu1119 d2738b6c78421a8524727a8991487b4b 320 SMART SM00267 131 302 2.9E-45 T 14-10-2018 IPR000160 GGDEF domain Atu1119 d2738b6c78421a8524727a8991487b4b 320 Gene3D G3DSA:3.30.70.270 128 302 3.9E-44 T 14-10-2018 Atu1119 d2738b6c78421a8524727a8991487b4b 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 299 7.2E-35 T 14-10-2018 IPR000160 GGDEF domain Atu3389 4dc4d7918db5f0178f04c1b503c49362 355 Pfam PF01032 FecCD transport family 35 347 8.6E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu3389 4dc4d7918db5f0178f04c1b503c49362 355 SUPERFAMILY SSF81345 17 347 4.97E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu3389 4dc4d7918db5f0178f04c1b503c49362 355 Gene3D G3DSA:1.10.3470.10 22 354 5.6E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 Gene3D G3DSA:2.40.50.100 241 359 7.2E-28 T 14-10-2018 Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 SUPERFAMILY SSF50331 237 359 2.16E-29 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 Gene3D G3DSA:2.40.50.140 288 345 7.2E-28 T 14-10-2018 Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 SMART SM00382 28 212 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 Pfam PF08402 TOBE domain 282 353 2.0E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 SUPERFAMILY SSF52540 4 242 5.32E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 Gene3D G3DSA:3.40.50.300 1 239 8.4E-76 T 14-10-2018 Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 Pfam PF00005 ABC transporter 19 161 1.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0595 22a2a6d26c6903a174eb614c7435c7f3 362 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu8191 c98bcf3297a03b2a9e75d187819fde47 125 Pfam PF05164 Cell division protein ZapA 4 115 3.2E-20 T 14-10-2018 IPR007838 Cell division protein ZapA-like Atu8191 c98bcf3297a03b2a9e75d187819fde47 125 SUPERFAMILY SSF102829 3 89 2.48E-22 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily Atu3796 ccea97761552586cb6c489051cffbf9a 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 355 6.9E-67 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu3796 ccea97761552586cb6c489051cffbf9a 361 Gene3D G3DSA:2.40.50.100 57 203 3.9E-60 T 14-10-2018 Atu3796 ccea97761552586cb6c489051cffbf9a 361 Gene3D G3DSA:2.40.30.170 45 279 3.9E-60 T 14-10-2018 Atu3796 ccea97761552586cb6c489051cffbf9a 361 Gene3D G3DSA:1.10.287.470 91 164 3.9E-60 T 14-10-2018 Atu3796 ccea97761552586cb6c489051cffbf9a 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 269 7.4E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu3796 ccea97761552586cb6c489051cffbf9a 361 SUPERFAMILY SSF111369 48 272 9.55E-19 T 14-10-2018 Atu3796 ccea97761552586cb6c489051cffbf9a 361 Gene3D G3DSA:2.40.420.20 280 353 3.9E-60 T 14-10-2018 Atu1731 a1b3da111527bc265f42d78c5815d7c2 165 Pfam PF00156 Phosphoribosyl transferase domain 12 153 1.6E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu1731 a1b3da111527bc265f42d78c5815d7c2 165 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 4 163 40.56 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 Atu1731 a1b3da111527bc265f42d78c5815d7c2 165 Gene3D G3DSA:3.40.50.2020 6 162 2.8E-38 T 14-10-2018 Atu1731 a1b3da111527bc265f42d78c5815d7c2 165 SUPERFAMILY SSF53271 7 152 8.0E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu2660 3319bcbe7457de48f0d9d0f49373deaa 183 SMART SM01152 88 169 4.2E-35 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Atu2660 3319bcbe7457de48f0d9d0f49373deaa 183 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 92 167 3.9E-24 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Atu2660 3319bcbe7457de48f0d9d0f49373deaa 183 Hamap MF_00634 UPF0235 protein YggU [yggU]. 88 180 18.99 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Atu2660 3319bcbe7457de48f0d9d0f49373deaa 183 Gene3D G3DSA:3.30.1200.10 81 182 8.9E-26 T 14-10-2018 IPR036591 YggU-like superfamily Atu2660 3319bcbe7457de48f0d9d0f49373deaa 183 SUPERFAMILY SSF69786 84 181 2.09E-23 T 14-10-2018 IPR036591 YggU-like superfamily Atu4072 c3edd2bb33ca27a6a2c2cf2bb394f609 162 Pfam PF01575 MaoC like domain 13 119 3.8E-21 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Atu4072 c3edd2bb33ca27a6a2c2cf2bb394f609 162 SUPERFAMILY SSF54637 9 149 2.31E-32 T 14-10-2018 IPR029069 HotDog domain superfamily Atu4072 c3edd2bb33ca27a6a2c2cf2bb394f609 162 Gene3D G3DSA:3.10.129.10 5 151 7.8E-41 T 14-10-2018 Atu5407 0d4e59d19e2654dcfe0cf05bcd358ef0 376 Gene3D G3DSA:3.20.20.150 1 282 3.5E-35 T 14-10-2018 Atu5407 0d4e59d19e2654dcfe0cf05bcd358ef0 376 Pfam PF01261 Xylose isomerase-like TIM barrel 22 239 1.5E-23 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu5407 0d4e59d19e2654dcfe0cf05bcd358ef0 376 SUPERFAMILY SSF51658 17 269 1.17E-28 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 Gene3D G3DSA:3.30.70.360 194 308 7.0E-131 T 14-10-2018 Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 PIRSF PIRSF005962 14 399 1.2E-117 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 Pfam PF01546 Peptidase family M20/M25/M40 86 393 1.8E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 26 384 1.1E-126 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 Gene3D G3DSA:3.40.630.10 26 381 7.0E-131 T 14-10-2018 Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 SUPERFAMILY SSF55031 195 304 4.06E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 SUPERFAMILY SSF53187 14 396 1.82E-86 T 14-10-2018 Atu3445 6f73e94b52ac1ebbea2ece8dde06efba 399 Pfam PF07687 Peptidase dimerisation domain 195 295 4.1E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu4282 f01cf173787bf7dd172347d01c1f3ef9 252 SUPERFAMILY SSF161098 25 212 2.22E-35 T 14-10-2018 IPR035906 MetI-like superfamily Atu4282 f01cf173787bf7dd172347d01c1f3ef9 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 227 5.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4282 f01cf173787bf7dd172347d01c1f3ef9 252 Gene3D G3DSA:1.10.3720.10 20 230 2.0E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu4282 f01cf173787bf7dd172347d01c1f3ef9 252 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 28 120 2.2E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 Pfam PF01960 ArgJ family 24 413 1.0E-137 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 SUPERFAMILY SSF56266 20 410 5.23E-133 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 26 411 0.0 T 14-10-2018 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 Gene3D G3DSA:3.10.20.340 285 413 2.7E-45 T 14-10-2018 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 18 413 3.9E-112 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 Gene3D G3DSA:3.60.70.12 14 284 7.0E-86 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu3518 b5f0c1e3d30c4abb3c5b8ebb169bb903 413 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 413 152.447 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu0400 772705a813571662282fe45a1ec25b19 232 SUPERFAMILY SSF53271 18 224 1.13E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu0400 772705a813571662282fe45a1ec25b19 232 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 232 30.152 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu0400 772705a813571662282fe45a1ec25b19 232 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 19 190 9.7E-35 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu0400 772705a813571662282fe45a1ec25b19 232 Gene3D G3DSA:3.40.50.2020 1 230 5.5E-68 T 14-10-2018 Atu0400 772705a813571662282fe45a1ec25b19 232 Pfam PF00156 Phosphoribosyl transferase domain 60 154 1.3E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu3745 c415a8b0f370ff7352017d33512339ca 547 SUPERFAMILY SSF51905 2 547 3.74E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3745 c415a8b0f370ff7352017d33512339ca 547 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 540 547 1.6E-6 T 14-10-2018 Atu3745 c415a8b0f370ff7352017d33512339ca 547 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-6 T 14-10-2018 Atu3745 c415a8b0f370ff7352017d33512339ca 547 Pfam PF00890 FAD binding domain 5 531 6.2E-123 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu3745 c415a8b0f370ff7352017d33512339ca 547 PIRSF PIRSF036654 1 547 0.0 T 14-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 SUPERFAMILY SSF50331 190 307 2.11E-25 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 ProSitePatterns PS00211 ABC transporters family signature. 87 101 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 Gene3D G3DSA:3.40.50.300 1 174 4.9E-50 T 14-10-2018 Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 SUPERFAMILY SSF52540 1 196 5.45E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 Pfam PF08402 TOBE domain 227 301 5.7E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 Gene3D G3DSA:2.40.50.940 175 302 5.3E-29 T 14-10-2018 Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 Gene3D G3DSA:2.40.50.140 234 293 5.3E-29 T 14-10-2018 Atu5400 f351f80bea96ebc51c9736709d5de0b7 308 Pfam PF00005 ABC transporter 1 114 1.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1450 cbf7785c95b6bf7e60bf22c9803e3828 80 Pfam PF17209 Hfq protein 8 70 6.1E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Atu1450 cbf7785c95b6bf7e60bf22c9803e3828 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 66 3.0E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Atu1450 cbf7785c95b6bf7e60bf22c9803e3828 80 Gene3D G3DSA:2.30.30.100 1 78 2.0E-32 T 14-10-2018 Atu1450 cbf7785c95b6bf7e60bf22c9803e3828 80 SUPERFAMILY SSF50182 7 66 8.5E-24 T 14-10-2018 IPR010920 LSM domain superfamily Atu1450 cbf7785c95b6bf7e60bf22c9803e3828 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 29.112 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Atu2408 7507928bf8f0871c7fa2d4fe38b7d496 243 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 232 22.321 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Atu2408 7507928bf8f0871c7fa2d4fe38b7d496 243 Pfam PF01774 UreD urease accessory protein 25 221 8.6E-45 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Atu1620 f2eb7fb868076202fac70ac7822df514 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu1620 f2eb7fb868076202fac70ac7822df514 256 SUPERFAMILY SSF51351 5 250 9.82E-84 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu1620 f2eb7fb868076202fac70ac7822df514 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 250 56.229 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu1620 f2eb7fb868076202fac70ac7822df514 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 241 1.2E-51 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu1620 f2eb7fb868076202fac70ac7822df514 256 Gene3D G3DSA:3.20.20.70 1 254 1.2E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1620 f2eb7fb868076202fac70ac7822df514 256 Pfam PF00121 Triosephosphate isomerase 8 247 8.2E-79 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu5325 366f0108bfe61021a72469bb776ca30a 300 Gene3D G3DSA:3.40.190.10 98 297 6.5E-59 T 14-10-2018 Atu5325 366f0108bfe61021a72469bb776ca30a 300 Gene3D G3DSA:3.40.190.10 169 271 6.5E-59 T 14-10-2018 Atu5325 366f0108bfe61021a72469bb776ca30a 300 Gene3D G3DSA:1.10.10.10 8 92 2.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5325 366f0108bfe61021a72469bb776ca30a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 69 5.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5325 366f0108bfe61021a72469bb776ca30a 300 SUPERFAMILY SSF53850 95 300 1.3E-46 T 14-10-2018 Atu5325 366f0108bfe61021a72469bb776ca30a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5325 366f0108bfe61021a72469bb776ca30a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5325 366f0108bfe61021a72469bb776ca30a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5325 366f0108bfe61021a72469bb776ca30a 300 SUPERFAMILY SSF46785 12 118 5.1E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5325 366f0108bfe61021a72469bb776ca30a 300 Pfam PF03466 LysR substrate binding domain 94 298 2.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4509 cf2281b24f927e6a8616a05105dabca8 270 SUPERFAMILY SSF51182 6 253 1.16E-72 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4509 cf2281b24f927e6a8616a05105dabca8 270 PIRSF PIRSF036628 1 270 2.4E-111 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Atu4509 cf2281b24f927e6a8616a05105dabca8 270 Gene3D G3DSA:2.60.120.10 122 270 6.9E-56 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4509 cf2281b24f927e6a8616a05105dabca8 270 Pfam PF04962 KduI/IolB family 7 264 9.1E-109 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Atu4509 cf2281b24f927e6a8616a05105dabca8 270 Gene3D G3DSA:2.60.120.10 13 121 5.8E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4509 cf2281b24f927e6a8616a05105dabca8 270 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 16 264 5.9E-101 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Atu3189 2ad29487cddd5113402962e28fdd7749 247 Pfam PF13489 Methyltransferase domain 60 182 6.8E-10 T 14-10-2018 Atu3189 2ad29487cddd5113402962e28fdd7749 247 Gene3D G3DSA:3.40.50.150 41 245 7.8E-21 T 14-10-2018 Atu3189 2ad29487cddd5113402962e28fdd7749 247 SUPERFAMILY SSF53335 39 211 4.99E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4610 6fbe3703cf2a43c222f45d1ca0ed9c62 358 Gene3D G3DSA:3.90.25.10 216 351 1.2E-38 T 14-10-2018 Atu4610 6fbe3703cf2a43c222f45d1ca0ed9c62 358 Gene3D G3DSA:3.40.50.720 4 156 7.6E-26 T 14-10-2018 Atu4610 6fbe3703cf2a43c222f45d1ca0ed9c62 358 Gene3D G3DSA:3.40.50.720 181 339 1.2E-38 T 14-10-2018 Atu4610 6fbe3703cf2a43c222f45d1ca0ed9c62 358 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 284 2.9E-39 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu4610 6fbe3703cf2a43c222f45d1ca0ed9c62 358 SUPERFAMILY SSF51735 1 356 9.77E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 Gene3D G3DSA:2.40.30.60 1 82 3.1E-21 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 1 161 21.408 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 Pfam PF05239 PRC-barrel domain 88 159 6.2E-12 T 14-10-2018 IPR027275 PRC-barrel domain Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 Gene3D G3DSA:2.30.30.240 85 164 4.3E-14 T 14-10-2018 Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 Pfam PF01782 RimM N-terminal domain 1 78 3.4E-22 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 SUPERFAMILY SSF50346 90 157 3.4E-16 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 SUPERFAMILY SSF50447 2 82 4.59E-19 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu2700 d7fe2f6c2e78a590a1f9500c1cabdaac 179 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 1 158 6.5E-48 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 SUPERFAMILY SSF56796 13 371 3.01E-108 T 14-10-2018 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 Gene3D G3DSA:1.20.1090.10 183 376 4.4E-57 T 14-10-2018 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 PIRSF PIRSF001455 30 375 4.7E-102 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 Gene3D G3DSA:3.40.50.1970 3 182 6.9E-62 T 14-10-2018 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 Pfam PF01761 3-dehydroquinate synthase 77 340 1.3E-101 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 10 371 68.407 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atu3625 0561c1c59f3b5eca2a3b2527aec6ae99 377 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 22 369 1.2E-108 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Atu6065 b9421ac7b8851e4fa5215fee47e5186a 207 Gene3D G3DSA:1.20.1290.10 84 207 2.9E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu6065 b9421ac7b8851e4fa5215fee47e5186a 207 SUPERFAMILY SSF69118 23 204 1.01E-45 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu6065 b9421ac7b8851e4fa5215fee47e5186a 207 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 25 202 1.0E-71 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related Atu6065 b9421ac7b8851e4fa5215fee47e5186a 207 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 84 128 2.2E-9 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu6065 b9421ac7b8851e4fa5215fee47e5186a 207 Gene3D G3DSA:1.20.5.810 33 81 1.6E-7 T 14-10-2018 Atu6065 b9421ac7b8851e4fa5215fee47e5186a 207 Pfam PF02627 Carboxymuconolactone decarboxylase family 67 148 4.0E-12 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu0371 abba08140959215d501cfee748b2a2a9 284 Gene3D G3DSA:2.160.10.10 94 269 3.1E-55 T 14-10-2018 Atu0371 abba08140959215d501cfee748b2a2a9 284 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 141 169 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu0371 abba08140959215d501cfee748b2a2a9 284 SUPERFAMILY SSF51161 8 268 1.66E-68 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu0371 abba08140959215d501cfee748b2a2a9 284 Gene3D G3DSA:1.10.166.10 6 75 8.9E-30 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Atu0371 abba08140959215d501cfee748b2a2a9 284 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 9 283 1.1E-132 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Atu0371 abba08140959215d501cfee748b2a2a9 284 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 173 0.0012 T 14-10-2018 IPR001451 Hexapeptide repeat Atu0371 abba08140959215d501cfee748b2a2a9 284 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 6 284 57.391 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Atu0371 abba08140959215d501cfee748b2a2a9 284 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 182 217 4.7E-11 T 14-10-2018 IPR001451 Hexapeptide repeat Atu0371 abba08140959215d501cfee748b2a2a9 284 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 8 74 3.5E-24 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 286 314 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 241 276 3.1E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 277 310 1.1E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 180 2.8E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Gene3D G3DSA:3.40.1390.10 5 110 1.1E-14 T 14-10-2018 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 34 100 7.7E-12 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 SUPERFAMILY SSF51161 44 334 8.85E-76 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 18 344 34.043 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 Gene3D G3DSA:2.160.10.10 120 328 1.9E-63 T 14-10-2018 Atu1382 e38aab2cc3a14c8f263abce16f2fbd38 355 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 17 347 4.4E-130 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 Pfam PF08402 TOBE domain 281 359 1.5E-15 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 Gene3D G3DSA:2.40.50.140 301 350 7.6E-6 T 14-10-2018 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 Gene3D G3DSA:2.40.50.100 256 359 7.6E-6 T 14-10-2018 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 Gene3D G3DSA:3.40.50.300 2 240 5.4E-75 T 14-10-2018 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 SUPERFAMILY SSF50331 242 358 3.02E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4246 191db9c2b892d82042820f5c0fca0b94 360 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 SUPERFAMILY SSF52540 5 244 6.96E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4246 191db9c2b892d82042820f5c0fca0b94 360 Pfam PF00005 ABC transporter 22 163 4.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4246 191db9c2b892d82042820f5c0fca0b94 360 SMART SM00382 30 213 8.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 Pfam PF00106 short chain dehydrogenase 2 188 6.2E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 SUPERFAMILY SSF51735 2 200 1.06E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4865 87cf3a626abac29e7f2f53cf7f68c1a4 293 Gene3D G3DSA:3.40.50.720 1 293 2.1E-55 T 14-10-2018 Atu1779 15818abfdc1458dc6f4a0c2014280b21 103 SUPERFAMILY SSF109910 9 88 1.83E-23 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Atu1779 15818abfdc1458dc6f4a0c2014280b21 103 Pfam PF03937 Flavinator of succinate dehydrogenase 15 86 2.0E-25 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase Atu1779 15818abfdc1458dc6f4a0c2014280b21 103 Gene3D G3DSA:1.10.150.250 10 94 5.1E-23 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Atu0847 0952de191bec954d2281016e27f09d80 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 139 1.9E-55 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 Atu0847 0952de191bec954d2281016e27f09d80 140 Gene3D G3DSA:2.20.25.10 2 44 9.1E-20 T 14-10-2018 Atu0847 0952de191bec954d2281016e27f09d80 140 SUPERFAMILY SSF82784 1 138 3.66E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Atu0847 0952de191bec954d2281016e27f09d80 140 Pfam PF02566 OsmC-like protein 41 135 1.3E-19 T 14-10-2018 IPR003718 OsmC/Ohr family Atu0847 0952de191bec954d2281016e27f09d80 140 Gene3D G3DSA:3.30.300.20 45 140 2.2E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu2148 97acf33a83634f61605e45e01d502795 294 SUPERFAMILY SSF161098 18 289 1.68E-33 T 14-10-2018 IPR035906 MetI-like superfamily Atu2148 97acf33a83634f61605e45e01d502795 294 Gene3D G3DSA:1.10.3720.10 13 285 1.3E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu2148 97acf33a83634f61605e45e01d502795 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 291 2.4E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 336 547 9.1E-41 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 SUPERFAMILY SSF55681 245 545 4.27E-88 T 14-10-2018 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Gene3D G3DSA:3.40.50.800 551 664 1.2E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Gene3D G3DSA:3.30.980.10 71 224 8.7E-65 T 14-10-2018 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Pfam PF02824 TGS domain 8 62 4.1E-6 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Pfam PF03129 Anticodon binding domain 560 647 3.5E-18 T 14-10-2018 IPR004154 Anticodon-binding Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 SUPERFAMILY SSF55186 66 243 3.01E-65 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 7.4E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 SUPERFAMILY SSF81271 5 63 3.92E-12 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 SUPERFAMILY SSF52954 546 650 1.09E-27 T 14-10-2018 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Gene3D G3DSA:3.10.20.30 2 64 1.8E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 PRINTS PR01047 Threonyl-tRNA synthetase signature 483 511 1.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 PRINTS PR01047 Threonyl-tRNA synthetase signature 342 370 1.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 PRINTS PR01047 Threonyl-tRNA synthetase signature 526 539 1.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 PRINTS PR01047 Threonyl-tRNA synthetase signature 375 398 1.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 PRINTS PR01047 Threonyl-tRNA synthetase signature 553 565 1.7E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Gene3D G3DSA:3.30.54.20 132 188 8.7E-65 T 14-10-2018 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 649 3.0E-204 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Gene3D G3DSA:3.30.930.10 225 550 1.1E-117 T 14-10-2018 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 653 32.334 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Atu1746 d60ab68f0efcc56e8acc4289aa2d2a25 667 SMART SM00863 171 221 3.1E-23 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Atu3357 f56cc4f6158421a034e23f5d5020fd1a 279 Gene3D G3DSA:3.40.190.10 129 222 1.3E-43 T 14-10-2018 Atu3357 f56cc4f6158421a034e23f5d5020fd1a 279 SMART SM00062 40 257 1.8E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3357 f56cc4f6158421a034e23f5d5020fd1a 279 Gene3D G3DSA:3.40.190.10 32 253 1.3E-43 T 14-10-2018 Atu3357 f56cc4f6158421a034e23f5d5020fd1a 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 256 6.3E-36 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3357 f56cc4f6158421a034e23f5d5020fd1a 279 SUPERFAMILY SSF53850 31 258 1.11E-44 T 14-10-2018 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 TIGRFAM TIGR00510 lipA: lipoyl synthase 20 310 6.7E-111 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 14 66 6.8E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 PIRSF PIRSF005963 2 322 5.4E-132 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 Pfam PF04055 Radical SAM superfamily 83 243 3.8E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 150.949 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 Gene3D G3DSA:3.20.20.70 77 294 5.0E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 SMART SM00729 77 284 7.2E-8 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu1436 ccb622ecbd039a71e2b580bbe2b6b824 323 SUPERFAMILY SSF102114 42 304 1.06E-61 T 14-10-2018 Atu4844 0892eb2807216bbb802b9ce563e70807 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 312 3.0E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0684 2a9273b8572006e94758702d51669916 282 Gene3D G3DSA:3.40.50.1000 16 250 2.1E-51 T 14-10-2018 IPR023214 HAD superfamily Atu0684 2a9273b8572006e94758702d51669916 282 Pfam PF13344 Haloacid dehalogenase-like hydrolase 18 114 1.1E-16 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Atu0684 2a9273b8572006e94758702d51669916 282 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 18 246 4.4E-44 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Atu0684 2a9273b8572006e94758702d51669916 282 Gene3D G3DSA:3.40.50.1000 83 192 2.1E-51 T 14-10-2018 IPR023214 HAD superfamily Atu0684 2a9273b8572006e94758702d51669916 282 SUPERFAMILY SSF56784 15 256 1.37E-44 T 14-10-2018 IPR036412 HAD-like superfamily Atu0684 2a9273b8572006e94758702d51669916 282 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 9 243 2.1E-43 T 14-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 Atu0684 2a9273b8572006e94758702d51669916 282 Pfam PF13242 HAD-hyrolase-like 192 252 6.7E-8 T 14-10-2018 Atu3352 27f73704f0469b8123767077cd27cb86 410 Pfam PF01547 Bacterial extracellular solute-binding protein 38 313 2.1E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3352 27f73704f0469b8123767077cd27cb86 410 Gene3D G3DSA:3.40.190.10 26 368 4.6E-119 T 14-10-2018 Atu3352 27f73704f0469b8123767077cd27cb86 410 SUPERFAMILY SSF53850 25 404 1.28E-43 T 14-10-2018 Atu3352 27f73704f0469b8123767077cd27cb86 410 Gene3D G3DSA:3.40.190.10 142 390 4.6E-119 T 14-10-2018 Atu2416 f9c645a8cff16f7af022657052bfd450 344 Gene3D G3DSA:3.10.20.70 1 90 4.1E-30 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2416 f9c645a8cff16f7af022657052bfd450 344 SUPERFAMILY SSF54368 31 86 2.62E-9 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2416 f9c645a8cff16f7af022657052bfd450 344 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 217 234 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu2416 f9c645a8cff16f7af022657052bfd450 344 ProSitePatterns PS00180 Glutamine synthetase signature 1. 43 60 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu2416 f9c645a8cff16f7af022657052bfd450 344 Pfam PF00120 Glutamine synthetase, catalytic domain 104 331 2.5E-17 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2416 f9c645a8cff16f7af022657052bfd450 344 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 5 84 1.4E-15 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu2416 f9c645a8cff16f7af022657052bfd450 344 SUPERFAMILY SSF55931 100 333 6.77E-59 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu2416 f9c645a8cff16f7af022657052bfd450 344 Gene3D G3DSA:3.30.590.40 91 340 5.8E-92 T 14-10-2018 Atu2416 f9c645a8cff16f7af022657052bfd450 344 SMART SM01230 89 333 1.5E-49 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2136 f3f2b43a589436ff506e567e84eccf46 238 SUPERFAMILY SSF52540 1 220 2.76E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2136 f3f2b43a589436ff506e567e84eccf46 238 PIRSF PIRSF009320 1 225 7.1E-36 T 14-10-2018 Atu2136 f3f2b43a589436ff506e567e84eccf46 238 Pfam PF07015 VirC1 protein 1 198 9.0E-15 T 14-10-2018 IPR009744 VirC1 Atu2136 f3f2b43a589436ff506e567e84eccf46 238 Gene3D G3DSA:3.40.50.300 1 218 4.5E-40 T 14-10-2018 Atu3574 7ba4f6fe8c809cfae34f2dad0020e8b7 260 SUPERFAMILY SSF52540 7 236 1.33E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3574 7ba4f6fe8c809cfae34f2dad0020e8b7 260 SMART SM00382 33 223 4.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3574 7ba4f6fe8c809cfae34f2dad0020e8b7 260 Pfam PF00005 ABC transporter 25 175 5.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3574 7ba4f6fe8c809cfae34f2dad0020e8b7 260 Gene3D G3DSA:3.40.50.300 3 243 3.1E-59 T 14-10-2018 Atu5527 c1bda3b0857e281d1351be08297afdfb 200 Gene3D G3DSA:3.40.50.360 2 179 2.1E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu5527 c1bda3b0857e281d1351be08297afdfb 200 Pfam PF03358 NADPH-dependent FMN reductase 5 150 5.0E-30 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Atu5527 c1bda3b0857e281d1351be08297afdfb 200 SUPERFAMILY SSF52218 5 172 1.84E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu5527 c1bda3b0857e281d1351be08297afdfb 200 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 178 2.7E-72 T 14-10-2018 IPR019912 FMN reductase, MsuE-like Atu5329 b135b02d21953dbb520dfddb05b26e63 194 Pfam PF03737 Aldolase/RraA 9 142 2.3E-41 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Atu5329 b135b02d21953dbb520dfddb05b26e63 194 SUPERFAMILY SSF89562 3 153 4.32E-44 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Atu5329 b135b02d21953dbb520dfddb05b26e63 194 Gene3D G3DSA:3.50.30.100 2 164 4.3E-50 T 14-10-2018 Atu1311 5a8f428fb58755a67af2d57e7ad7753c 203 SUPERFAMILY SSF55729 1 191 4.49E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1311 5a8f428fb58755a67af2d57e7ad7753c 203 Gene3D G3DSA:3.40.630.30 1 202 6.2E-57 T 14-10-2018 Atu1311 5a8f428fb58755a67af2d57e7ad7753c 203 Pfam PF00583 Acetyltransferase (GNAT) family 48 184 4.5E-7 T 14-10-2018 IPR000182 GNAT domain Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 SUPERFAMILY SSF52418 76 336 6.54E-92 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 332 8.8E-116 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 SUPERFAMILY SSF47648 5 70 3.79E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 333 37.459 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 65 2.3E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 Gene3D G3DSA:1.20.970.10 7 70 7.8E-25 T 14-10-2018 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 Pfam PF00591 Glycosyl transferase family, a/b domain 75 323 1.8E-92 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu1687 c58369840da09bd6c2d9c95a36525ab8 342 Gene3D G3DSA:3.40.1030.10 72 340 4.2E-100 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu1654 6660b1f6cc57247e36c2fa5460bacc7a 228 Gene3D G3DSA:3.40.109.10 5 202 2.3E-58 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu1654 6660b1f6cc57247e36c2fa5460bacc7a 228 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 16 220 7.1E-94 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 Atu1654 6660b1f6cc57247e36c2fa5460bacc7a 228 Pfam PF00881 Nitroreductase family 28 194 4.1E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu1654 6660b1f6cc57247e36c2fa5460bacc7a 228 SUPERFAMILY SSF55469 19 227 1.23E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu1042 eb9ca8ad8c5e23b1f052ef8f978c9196 280 SUPERFAMILY SSF50800 3 268 3.24E-15 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Atu1042 eb9ca8ad8c5e23b1f052ef8f978c9196 280 SUPERFAMILY SSF141673 3 126 2.35E-22 T 14-10-2018 Atu1042 eb9ca8ad8c5e23b1f052ef8f978c9196 280 Pfam PF03476 MOSC N-terminal beta barrel domain 3 112 2.3E-15 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 Atu1042 eb9ca8ad8c5e23b1f052ef8f978c9196 280 Pfam PF03473 MOSC domain 136 264 1.3E-27 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Atu2244 f1ada3cf460715e1fba486799c98c13f 161 SUPERFAMILY SSF75217 5 158 1.18E-38 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu2244 f1ada3cf460715e1fba486799c98c13f 161 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 12 161 28.81 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Atu2244 f1ada3cf460715e1fba486799c98c13f 161 PIRSF PIRSF029256 11 161 1.9E-56 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Atu2244 f1ada3cf460715e1fba486799c98c13f 161 Gene3D G3DSA:3.40.1280.10 11 161 5.0E-50 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu2244 f1ada3cf460715e1fba486799c98c13f 161 Pfam PF00588 SpoU rRNA Methylase family 12 150 1.6E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 Gene3D G3DSA:1.10.220.30 12 94 1.1E-14 T 14-10-2018 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 Gene3D G3DSA:1.10.220.30 108 204 8.9E-19 T 14-10-2018 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 Pfam PF14842 FliG N-terminal domain 16 107 1.5E-15 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Atu0563 fc52f5c9abfb405504933e8537211cd7 347 Pfam PF01706 FliG C-terminal domain 228 335 5.1E-23 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Atu0563 fc52f5c9abfb405504933e8537211cd7 347 SUPERFAMILY SSF48029 127 335 1.44E-46 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Atu0563 fc52f5c9abfb405504933e8537211cd7 347 Gene3D G3DSA:1.10.220.30 205 343 3.9E-26 T 14-10-2018 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 236 256 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 282 308 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 126 149 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 258 278 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 16 32 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 45 71 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 3.3E-51 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Atu0563 fc52f5c9abfb405504933e8537211cd7 347 SUPERFAMILY SSF48029 19 107 2.22E-12 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Atu0563 fc52f5c9abfb405504933e8537211cd7 347 Pfam PF14841 FliG middle domain 127 200 8.1E-20 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 Pfam PF00571 CBS domain 287 335 7.5E-4 T 14-10-2018 IPR000644 CBS domain Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 Gene3D G3DSA:3.20.20.450 9 258 4.6E-59 T 14-10-2018 IPR035919 EAL domain superfamily Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 SMART SM00267 406 597 2.0E-4 T 14-10-2018 IPR000160 GGDEF domain Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 SUPERFAMILY SSF55073 423 561 1.57E-16 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 SUPERFAMILY SSF141868 28 252 6.41E-57 T 14-10-2018 IPR035919 EAL domain superfamily Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 Gene3D G3DSA:3.30.70.270 413 596 1.2E-18 T 14-10-2018 Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 SMART SM00052 2 254 1.6E-31 T 14-10-2018 IPR001633 EAL domain Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 SUPERFAMILY SSF54631 278 414 5.9E-9 T 14-10-2018 Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 Gene3D G3DSA:3.10.580.10 275 412 2.2E-8 T 14-10-2018 Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 Pfam PF00563 EAL domain 27 249 2.6E-50 T 14-10-2018 IPR001633 EAL domain Atu0826 443ff0165b01c934d1ecc9d3fff905ca 603 Pfam PF00990 Diguanylate cyclase, GGDEF domain 422 525 3.7E-10 T 14-10-2018 IPR000160 GGDEF domain Atu0534 0ad3012cdacdaa010cc01cb75d2c9b0d 99 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 30 97 5.9E-32 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Atu0534 0ad3012cdacdaa010cc01cb75d2c9b0d 99 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 28 99 26.032 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Atu0534 0ad3012cdacdaa010cc01cb75d2c9b0d 99 SUPERFAMILY SSF50249 28 98 3.21E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0534 0ad3012cdacdaa010cc01cb75d2c9b0d 99 Gene3D G3DSA:2.40.50.140 27 99 7.7E-34 T 14-10-2018 Atu0534 0ad3012cdacdaa010cc01cb75d2c9b0d 99 Pfam PF01176 Translation initiation factor 1A / IF-1 35 97 6.6E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Atu0964 a9d716bdc12039ba7b7b73d55ad1aecb 212 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 3 211 5.6E-103 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 Atu0964 a9d716bdc12039ba7b7b73d55ad1aecb 212 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 5 210 1.8E-76 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 SUPERFAMILY SSF88946 13 121 3.4E-38 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 Gene3D G3DSA:1.20.120.1810 13 120 6.1E-30 T 14-10-2018 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 Pfam PF04545 Sigma-70, region 4 231 281 1.1E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 Pfam PF00140 Sigma-70 factor, region 1.2 18 44 5.0E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 SUPERFAMILY SSF88659 192 288 5.42E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 PIRSF PIRSF000770 10 295 1.1E-35 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 286 52.778 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 Gene3D G3DSA:1.20.140.160 145 287 1.0E-14 T 14-10-2018 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 254 280 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 283 2.0E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 Pfam PF04542 Sigma-70 region 2 53 121 1.7E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 285 3.3E-112 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 PRINTS PR00046 Major sigma-70 factor signature 235 247 7.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 PRINTS PR00046 Major sigma-70 factor signature 77 90 7.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 PRINTS PR00046 Major sigma-70 factor signature 254 269 7.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 PRINTS PR00046 Major sigma-70 factor signature 269 280 7.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu2445 fd7527ce22528ee8ebf1568f292a059e 300 PRINTS PR00046 Major sigma-70 factor signature 101 109 7.9E-21 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 SUPERFAMILY SSF54631 274 342 1.7E-7 T 14-10-2018 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 335 2.4E-102 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 Gene3D G3DSA:3.10.580.10 265 365 4.6E-5 T 14-10-2018 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 Pfam PF00005 ABC transporter 44 192 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 SMART SM00382 53 241 3.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 Gene3D G3DSA:3.40.50.300 3 264 3.3E-63 T 14-10-2018 Atu0893 0b7d5de937c44200ae0cf34a396f52c2 365 SUPERFAMILY SSF52540 40 270 4.82E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2470 38b683cf04aa891e898906fb1352efa0 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 22 155 1.2E-20 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Atu1442 b51b351f5d46bd1d55c4a248f678acb4 169 Gene3D G3DSA:3.90.950.20 1 169 7.3E-65 T 14-10-2018 IPR036653 CinA-like, C-terminal Atu1442 b51b351f5d46bd1d55c4a248f678acb4 169 Pfam PF02464 Competence-damaged protein 9 161 8.4E-52 T 14-10-2018 IPR008136 CinA, C-terminal Atu1442 b51b351f5d46bd1d55c4a248f678acb4 169 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 21 160 1.7E-44 T 14-10-2018 IPR008136 CinA, C-terminal Atu1442 b51b351f5d46bd1d55c4a248f678acb4 169 SUPERFAMILY SSF142433 4 163 4.97E-53 T 14-10-2018 IPR036653 CinA-like, C-terminal Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 631 671 2.2E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 172 7.2E-25 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 432 587 6.8E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 876 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 SUPERFAMILY SSF52374 5 681 5.42E-149 T 14-10-2018 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Gene3D G3DSA:3.90.740.10 228 428 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 SUPERFAMILY SSF50677 245 418 1.15E-44 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 SUPERFAMILY SSF47323 675 876 7.48E-31 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Gene3D G3DSA:3.10.330.110 582 641 0.0 T 14-10-2018 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Pfam PF08264 Anticodon-binding domain of tRNA 716 840 3.2E-18 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 572 582 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 501 519 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 539 561 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 8.0E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 876 22.636 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Gene3D G3DSA:3.10.20.590 816 876 5.2E-19 T 14-10-2018 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 412 1.1E-66 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Gene3D G3DSA:1.10.730.10 10 807 0.0 T 14-10-2018 Atu2748 4be51abb0e9f24035cd5121e556b8948 876 Gene3D G3DSA:3.40.50.620 34 581 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu2748 4be51abb0e9f24035cd5121e556b8948 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Atu2387 13292c33c58d4a701073bdf3a1509725 145 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu2387 13292c33c58d4a701073bdf3a1509725 145 Gene3D G3DSA:3.90.79.10 2 141 6.9E-24 T 14-10-2018 Atu2387 13292c33c58d4a701073bdf3a1509725 145 Pfam PF00293 NUDIX domain 12 116 6.8E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu2387 13292c33c58d4a701073bdf3a1509725 145 PRINTS PR00502 NUDIX hydrolase family signature 34 48 6.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu2387 13292c33c58d4a701073bdf3a1509725 145 PRINTS PR00502 NUDIX hydrolase family signature 48 63 6.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu2387 13292c33c58d4a701073bdf3a1509725 145 SUPERFAMILY SSF55811 8 120 5.69E-25 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu0472 6cce50b244f765dbb3aa699f4586052e 185 SUPERFAMILY SSF82153 38 183 1.57E-37 T 14-10-2018 IPR036378 FAS1 domain superfamily Atu0472 6cce50b244f765dbb3aa699f4586052e 185 Pfam PF02469 Fasciclin domain 49 183 1.2E-32 T 14-10-2018 IPR000782 FAS1 domain Atu0472 6cce50b244f765dbb3aa699f4586052e 185 SMART SM00554 73 184 6.4E-17 T 14-10-2018 IPR000782 FAS1 domain Atu0472 6cce50b244f765dbb3aa699f4586052e 185 Gene3D G3DSA:2.30.180.10 12 184 7.2E-43 T 14-10-2018 IPR036378 FAS1 domain superfamily Atu0081 12a1ac57016239651c535a4c726dfdda 338 SUPERFAMILY SSF53335 165 316 5.77E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0081 12a1ac57016239651c535a4c726dfdda 338 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu0081 12a1ac57016239651c535a4c726dfdda 338 Gene3D G3DSA:3.40.50.150 147 338 2.7E-40 T 14-10-2018 Atu0081 12a1ac57016239651c535a4c726dfdda 338 Pfam PF05175 Methyltransferase small domain 164 334 8.9E-54 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Atu3347 11b14dee98236f2645bdfb49d75a4d75 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 118 3.1E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3347 11b14dee98236f2645bdfb49d75a4d75 377 SUPERFAMILY SSF55347 129 289 3.11E-31 T 14-10-2018 Atu3347 11b14dee98236f2645bdfb49d75a4d75 377 Gene3D G3DSA:3.40.50.720 1 126 9.3E-31 T 14-10-2018 Atu3347 11b14dee98236f2645bdfb49d75a4d75 377 SUPERFAMILY SSF51735 5 172 5.3E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3347 11b14dee98236f2645bdfb49d75a4d75 377 Gene3D G3DSA:3.30.360.10 129 357 5.7E-35 T 14-10-2018 Atu2785 f25fbe08299a0f2da3d26fe220b364e0 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.7E-39 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2785 f25fbe08299a0f2da3d26fe220b364e0 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 25.879 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2785 f25fbe08299a0f2da3d26fe220b364e0 104 SUPERFAMILY SSF141091 1 102 2.88E-36 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2785 f25fbe08299a0f2da3d26fe220b364e0 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 2.6E-34 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1851 a2e5aabf7fae8b41edb73cb5cadcf529 77 PIRSF PIRSF003113 1 77 1.5E-19 T 14-10-2018 IPR002634 BolA protein Atu1851 a2e5aabf7fae8b41edb73cb5cadcf529 77 Pfam PF01722 BolA-like protein 27 77 1.0E-15 T 14-10-2018 IPR002634 BolA protein Atu1851 a2e5aabf7fae8b41edb73cb5cadcf529 77 SUPERFAMILY SSF82657 1 77 2.49E-23 T 14-10-2018 IPR036065 BolA-like superfamily Atu1851 a2e5aabf7fae8b41edb73cb5cadcf529 77 Gene3D G3DSA:3.30.300.90 3 76 8.0E-29 T 14-10-2018 Atu4443 c4c2a2a7d4746003f41190ac25bd5969 116 Gene3D G3DSA:1.10.3990.20 8 116 6.2E-40 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily Atu4443 c4c2a2a7d4746003f41190ac25bd5969 116 Pfam PF13467 Ribbon-helix-helix domain 16 83 3.3E-23 T 14-10-2018 IPR027373 Ribbon-helix-helix domain Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 Gene3D G3DSA:3.40.50.720 1 248 3.4E-78 T 14-10-2018 Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 1.7E-60 T 14-10-2018 Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 5.6E-5 T 14-10-2018 Atu5391 4b0a2c52562b7bde886f27678c858bb5 249 SUPERFAMILY SSF51735 5 246 1.77E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3806 ac2943d4fe1e318b95134538f3e56b1e 427 Gene3D G3DSA:3.90.1150.10 291 427 6.1E-43 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3806 ac2943d4fe1e318b95134538f3e56b1e 427 PIRSF PIRSF001434 5 427 1.3E-118 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu3806 ac2943d4fe1e318b95134538f3e56b1e 427 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 233 247 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu3806 ac2943d4fe1e318b95134538f3e56b1e 427 Gene3D G3DSA:3.40.640.10 15 289 4.0E-70 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3806 ac2943d4fe1e318b95134538f3e56b1e 427 SUPERFAMILY SSF53383 65 425 7.17E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3806 ac2943d4fe1e318b95134538f3e56b1e 427 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 424 3.1E-102 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 6.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 6.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 6.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 253 7.3E-66 T 14-10-2018 Atu5185 554900c60307d30eb84c8229edaed858 254 Gene3D G3DSA:3.40.50.720 5 253 9.3E-85 T 14-10-2018 Atu5185 554900c60307d30eb84c8229edaed858 254 SUPERFAMILY SSF51735 13 253 3.36E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5185 554900c60307d30eb84c8229edaed858 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 198 4.8E-4 T 14-10-2018 Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5185 554900c60307d30eb84c8229edaed858 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 Gene3D G3DSA:3.50.50.60 166 288 1.1E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-39 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 190 208 2.8E-39 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 294 2.8E-39 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.8E-39 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 306 328 2.8E-39 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 341 1.9E-69 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 379 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 438 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 445 465 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 215 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 321 328 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 293 9.3E-65 T 14-10-2018 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 SUPERFAMILY SSF51905 1 389 4.21E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 Gene3D G3DSA:3.50.50.60 5 346 1.1E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 362 470 4.0E-39 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 Gene3D G3DSA:3.30.390.30 361 480 6.6E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 SUPERFAMILY SSF55424 359 479 8.25E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 PIRSF PIRSF000350 1 477 2.9E-77 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atu1434 ec63026eb722ec5b12bae6f3c7632a22 481 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 479 1.5E-172 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Atu1728 ff8fc2ed6d0d04f4e23f04778a996f6b 199 Pfam PF03358 NADPH-dependent FMN reductase 3 141 1.7E-8 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Atu1728 ff8fc2ed6d0d04f4e23f04778a996f6b 199 SUPERFAMILY SSF52218 1 197 1.11E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu1728 ff8fc2ed6d0d04f4e23f04778a996f6b 199 Gene3D G3DSA:3.40.50.360 1 199 2.0E-74 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu1728 ff8fc2ed6d0d04f4e23f04778a996f6b 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 48.279 T 14-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Atu1728 ff8fc2ed6d0d04f4e23f04778a996f6b 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 2.7E-109 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Atu6190 2e53f756007821bc757455ead2caf7a1 556 Pfam PF07229 VirE2 1 556 0.0 T 14-10-2018 IPR009868 VirE2 GO:0003677 Atu2641 46af03a7aeb15f0f22809a2a09710370 180 SUPERFAMILY SSF50882 89 180 6.8E-14 T 14-10-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 Atu2641 46af03a7aeb15f0f22809a2a09710370 180 Pfam PF02974 Protease inhibitor Inh 90 180 6.4E-22 T 14-10-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 Atu2641 46af03a7aeb15f0f22809a2a09710370 180 PIRSF PIRSF034005 3 180 1.1E-81 T 14-10-2018 IPR010571 Outer membrane lipoprotein, Omp19, bacterial GO:0019867 Atu2550 d729596652980e0e5ea839940a1271ab 400 Pfam PF13533 Biotin-lipoyl like 68 114 6.6E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atu2550 d729596652980e0e5ea839940a1271ab 400 Gene3D G3DSA:1.10.287.470 101 173 4.2E-93 T 14-10-2018 Atu2550 d729596652980e0e5ea839940a1271ab 400 Gene3D G3DSA:2.40.50.100 66 209 4.2E-93 T 14-10-2018 Atu2550 d729596652980e0e5ea839940a1271ab 400 Gene3D G3DSA:2.40.420.20 304 373 4.2E-93 T 14-10-2018 Atu2550 d729596652980e0e5ea839940a1271ab 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 375 4.4E-70 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu2550 d729596652980e0e5ea839940a1271ab 400 Gene3D G3DSA:2.40.30.170 53 303 4.2E-93 T 14-10-2018 Atu2550 d729596652980e0e5ea839940a1271ab 400 SUPERFAMILY SSF111369 55 301 4.32E-71 T 14-10-2018 Atu1037 94774d15444e3a716ffc845ae02ccc10 250 SMART SM00419 181 229 0.007 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu1037 94774d15444e3a716ffc845ae02ccc10 250 Gene3D G3DSA:2.60.120.10 41 158 2.6E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1037 94774d15444e3a716ffc845ae02ccc10 250 Pfam PF13545 Crp-like helix-turn-helix domain 167 234 2.3E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu1037 94774d15444e3a716ffc845ae02ccc10 250 SUPERFAMILY SSF51206 17 157 1.07E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu1037 94774d15444e3a716ffc845ae02ccc10 250 SUPERFAMILY SSF46785 161 238 2.48E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1037 94774d15444e3a716ffc845ae02ccc10 250 Pfam PF00027 Cyclic nucleotide-binding domain 45 129 1.1E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu1037 94774d15444e3a716ffc845ae02ccc10 250 Gene3D G3DSA:1.10.10.10 159 247 2.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2743 29f5efe120d1631052a81412ea182d40 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 419 4.6E-136 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu2743 29f5efe120d1631052a81412ea182d40 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 1.0E-116 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu2743 29f5efe120d1631052a81412ea182d40 425 PIRSF PIRSF006066 1 425 1.6E-138 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu1194 0afc4845ce87a1c1184bd60cc3305e34 388 SUPERFAMILY SSF56349 85 334 4.41E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu1194 0afc4845ce87a1c1184bd60cc3305e34 388 Gene3D G3DSA:1.10.150.130 62 163 3.1E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Atu1194 0afc4845ce87a1c1184bd60cc3305e34 388 Gene3D G3DSA:1.10.443.10 164 342 3.7E-35 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu1194 0afc4845ce87a1c1184bd60cc3305e34 388 Pfam PF00589 Phage integrase family 165 328 5.5E-25 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atu6067 88cd208f81d2b78cd7a86e976e5f4f9e 189 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 14 186 7.4E-44 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related Atu6067 88cd208f81d2b78cd7a86e976e5f4f9e 189 Gene3D G3DSA:1.20.1290.10 68 189 9.0E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu6067 88cd208f81d2b78cd7a86e976e5f4f9e 189 SUPERFAMILY SSF69118 12 187 6.6E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu6067 88cd208f81d2b78cd7a86e976e5f4f9e 189 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 70 96 1.1E-7 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu6067 88cd208f81d2b78cd7a86e976e5f4f9e 189 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 97 1.9E-11 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu2568 37d9a347d955cda1484b90e95e9ec1e9 324 SUPERFAMILY SSF51971 1 318 2.12E-30 T 14-10-2018 Atu2568 37d9a347d955cda1484b90e95e9ec1e9 324 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 3 310 6.6E-80 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 Atu2568 37d9a347d955cda1484b90e95e9ec1e9 324 Gene3D G3DSA:3.30.9.10 81 276 6.8E-47 T 14-10-2018 Atu2568 37d9a347d955cda1484b90e95e9ec1e9 324 Pfam PF01266 FAD dependent oxidoreductase 3 311 3.7E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu2568 37d9a347d955cda1484b90e95e9ec1e9 324 SUPERFAMILY SSF54373 186 275 1.96E-18 T 14-10-2018 Atu2568 37d9a347d955cda1484b90e95e9ec1e9 324 Gene3D G3DSA:3.50.50.60 3 311 6.8E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 SUPERFAMILY SSF56519 81 205 1.11E-32 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 Gene3D G3DSA:3.40.710.10 298 480 5.8E-80 T 14-10-2018 Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 Gene3D G3DSA:3.90.1310.30 78 209 1.5E-27 T 14-10-2018 Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 256 561 4.6E-55 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 SUPERFAMILY SSF56601 228 570 4.05E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 Gene3D G3DSA:3.30.450.330 229 564 5.8E-80 T 14-10-2018 Atu1067 b67df4d21e7319fcda561c665e6c87a3 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 81 194 1.4E-10 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atu0873 1e6dff6482885dcf812bde3757290e72 295 Gene3D G3DSA:1.10.10.10 4 91 2.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0873 1e6dff6482885dcf812bde3757290e72 295 Pfam PF03466 LysR substrate binding domain 90 289 2.0E-45 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0873 1e6dff6482885dcf812bde3757290e72 295 SUPERFAMILY SSF53850 91 292 4.07E-40 T 14-10-2018 Atu0873 1e6dff6482885dcf812bde3757290e72 295 SUPERFAMILY SSF46785 4 114 2.72E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0873 1e6dff6482885dcf812bde3757290e72 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.1E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0873 1e6dff6482885dcf812bde3757290e72 295 Gene3D G3DSA:3.40.190.10 94 279 2.0E-40 T 14-10-2018 Atu0873 1e6dff6482885dcf812bde3757290e72 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0873 1e6dff6482885dcf812bde3757290e72 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0873 1e6dff6482885dcf812bde3757290e72 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0873 1e6dff6482885dcf812bde3757290e72 295 Gene3D G3DSA:3.40.190.10 167 267 2.0E-40 T 14-10-2018 Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 SUPERFAMILY SSF158837 571 778 2.09E-54 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 SUPERFAMILY SSF158837 456 546 7.59E-21 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 SUPERFAMILY SSF158837 1 126 9.02E-45 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 SUPERFAMILY SSF158837 345 451 2.88E-24 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Pfam PF06748 Protein of unknown function (DUF1217) 61 157 2.7E-19 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Pfam PF06748 Protein of unknown function (DUF1217) 492 614 1.3E-13 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Pfam PF06748 Protein of unknown function (DUF1217) 613 765 3.2E-44 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Pfam PF06748 Protein of unknown function (DUF1217) 375 499 1.8E-11 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Gene3D G3DSA:1.10.3700.10 131 262 9.3E-19 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Gene3D G3DSA:1.10.3700.10 1 130 3.5E-44 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Gene3D G3DSA:1.10.3700.10 336 461 1.0E-27 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 Gene3D G3DSA:1.10.3700.10 551 781 4.1E-69 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0653 8f300e07d0b913b9b1b2366dda30e364 812 SUPERFAMILY SSF158837 135 234 1.83E-14 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu2728 90e9ebcc1955112ea3f381323799eab4 588 SUPERFAMILY SSF52540 325 568 9.26E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2728 90e9ebcc1955112ea3f381323799eab4 588 Gene3D G3DSA:1.20.1560.10 3 322 7.1E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2728 90e9ebcc1955112ea3f381323799eab4 588 Pfam PF00005 ABC transporter 352 500 4.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2728 90e9ebcc1955112ea3f381323799eab4 588 SMART SM00382 360 552 8.0E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2728 90e9ebcc1955112ea3f381323799eab4 588 SUPERFAMILY SSF90123 10 299 1.7E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2728 90e9ebcc1955112ea3f381323799eab4 588 Gene3D G3DSA:3.40.50.300 326 581 7.0E-87 T 14-10-2018 Atu2728 90e9ebcc1955112ea3f381323799eab4 588 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2728 90e9ebcc1955112ea3f381323799eab4 588 TIGRFAM TIGR01192 chvA: glucan exporter ATP-binding protein 1 585 0.0 T 14-10-2018 IPR005896 Glucan exporter ATP-binding protein, NdvA GO:0005886|GO:0015441|GO:0015775 Atu2728 90e9ebcc1955112ea3f381323799eab4 588 Pfam PF00664 ABC transporter transmembrane region 23 288 1.4E-36 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 PIRSF PIRSF000094 2 260 3.8E-112 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 Gene3D G3DSA:1.10.8.400 205 258 8.2E-17 T 14-10-2018 Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 Gene3D G3DSA:3.40.50.720 9 201 5.0E-38 T 14-10-2018 Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 6.0E-85 T 14-10-2018 Atu0149 19f905fc6ac6567cf26ce4abb44cd364 268 SUPERFAMILY SSF51735 6 253 1.18E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4826 0dfa62a89448b6637a2610b12e63883f 336 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 285 1.2E-68 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu4826 0dfa62a89448b6637a2610b12e63883f 336 Gene3D G3DSA:3.40.190.170 27 334 6.9E-114 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu4826 0dfa62a89448b6637a2610b12e63883f 336 PIRSF PIRSF006470 1 332 2.1E-70 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu4826 0dfa62a89448b6637a2610b12e63883f 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 308 1.2E-74 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu5278 a29cd15a961daa1d437bca172e914a71 166 Pfam PF05974 Domain of unknown function (DUF892) 5 159 1.6E-59 T 14-10-2018 IPR010287 Domain of unknown function DUF892 Atu5278 a29cd15a961daa1d437bca172e914a71 166 Gene3D G3DSA:1.20.1260.10 1 166 2.5E-62 T 14-10-2018 IPR012347 Ferritin-like Atu5278 a29cd15a961daa1d437bca172e914a71 166 SUPERFAMILY SSF47240 1 153 1.03E-53 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PIRSF PIRSF000126 23 289 3.5E-67 T 14-10-2018 Atu4220 47574f5236f0728e849ff8f7ac362f13 291 Gene3D G3DSA:3.40.50.720 10 290 4.5E-53 T 14-10-2018 Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 205 1.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 176 1.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 124 1.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 224 1.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 38 55 1.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 174 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 205 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 Pfam PF00106 short chain dehydrogenase 39 227 1.4E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4220 47574f5236f0728e849ff8f7ac362f13 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 173 201 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4220 47574f5236f0728e849ff8f7ac362f13 291 SUPERFAMILY SSF51735 35 288 1.18E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3444 934cda42fdf826f25ee330603162e840 543 Gene3D G3DSA:3.90.76.10 59 208 4.1E-117 T 14-10-2018 Atu3444 934cda42fdf826f25ee330603162e840 543 Gene3D G3DSA:3.40.190.10 209 523 4.1E-117 T 14-10-2018 Atu3444 934cda42fdf826f25ee330603162e840 543 PIRSF PIRSF002741 14 543 3.0E-129 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3444 934cda42fdf826f25ee330603162e840 543 Gene3D G3DSA:3.10.105.10 284 515 4.1E-117 T 14-10-2018 Atu3444 934cda42fdf826f25ee330603162e840 543 SUPERFAMILY SSF53850 46 541 7.78E-126 T 14-10-2018 Atu3444 934cda42fdf826f25ee330603162e840 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 454 3.3E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu1681 2e66d84e2584e8003aeea6670010da35 164 Pfam PF01467 Cytidylyltransferase-like 5 138 3.6E-12 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atu1681 2e66d84e2584e8003aeea6670010da35 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 56 1.5E-11 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atu1681 2e66d84e2584e8003aeea6670010da35 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 161 1.2E-53 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atu1681 2e66d84e2584e8003aeea6670010da35 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 163 32.576 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atu1681 2e66d84e2584e8003aeea6670010da35 164 Gene3D G3DSA:3.40.50.620 1 164 1.1E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1681 2e66d84e2584e8003aeea6670010da35 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 2.8E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atu1681 2e66d84e2584e8003aeea6670010da35 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 2.8E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atu1681 2e66d84e2584e8003aeea6670010da35 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.8E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atu1681 2e66d84e2584e8003aeea6670010da35 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.8E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Atu1681 2e66d84e2584e8003aeea6670010da35 164 SUPERFAMILY SSF52374 1 160 1.94E-36 T 14-10-2018 Atu0160 d035d31fa3c540c1f461e9e134083076 245 Gene3D G3DSA:3.40.1410.10 96 230 2.9E-24 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu0160 d035d31fa3c540c1f461e9e134083076 245 SUPERFAMILY SSF64288 64 240 1.88E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu0160 d035d31fa3c540c1f461e9e134083076 245 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 12 241 1.2E-99 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 Atu0160 d035d31fa3c540c1f461e9e134083076 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.5E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0160 d035d31fa3c540c1f461e9e134083076 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 2.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0160 d035d31fa3c540c1f461e9e134083076 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 2.0E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0160 d035d31fa3c540c1f461e9e134083076 245 Gene3D G3DSA:1.10.10.10 12 80 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0160 d035d31fa3c540c1f461e9e134083076 245 SMART SM00345 17 76 1.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0160 d035d31fa3c540c1f461e9e134083076 245 SMART SM00866 97 234 1.0E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu0160 d035d31fa3c540c1f461e9e134083076 245 SUPERFAMILY SSF46785 10 80 2.08E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0160 d035d31fa3c540c1f461e9e134083076 245 Pfam PF07702 UTRA domain 99 233 3.0E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 SMART SM00388 357 422 9.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 SUPERFAMILY SSF47384 340 421 4.9E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Gene3D G3DSA:1.20.1480.50 264 359 2.2E-9 T 14-10-2018 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 SUPERFAMILY SSF55874 412 590 1.57E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Gene3D G3DSA:3.30.565.10 427 596 9.5E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Gene3D G3DSA:1.10.287.130 360 422 2.5E-14 T 14-10-2018 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 SMART SM00304 301 356 2.0E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Pfam PF13755 Sensor N-terminal transmembrane domain 33 97 1.6E-28 T 14-10-2018 IPR025908 Sensor N-terminal transmembrane domain Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Pfam PF13756 Stimulus-sensing domain 132 241 2.8E-36 T 14-10-2018 IPR025919 Stimulus-sensing domain Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 1.9E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Pfam PF00672 HAMP domain 302 352 2.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 590 2.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 Pfam PF00512 His Kinase A (phospho-acceptor) domain 360 421 9.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0033 458fefe6dd4074bd357ebb63bcd5acd0 596 SMART SM00387 474 592 5.8E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4256 af025d50c4e8829f44546fb6fb186d65 511 Pfam PF00005 ABC transporter 279 430 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 SUPERFAMILY SSF52540 269 501 1.1E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4256 af025d50c4e8829f44546fb6fb186d65 511 SUPERFAMILY SSF52540 2 232 1.55E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4256 af025d50c4e8829f44546fb6fb186d65 511 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 481 507 0.0037 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 213 242 5.8E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 Pfam PF00005 ABC transporter 5 161 4.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 Gene3D G3DSA:3.40.50.300 250 510 1.3E-83 T 14-10-2018 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 Gene3D G3DSA:3.40.50.300 1 249 1.2E-80 T 14-10-2018 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4256 af025d50c4e8829f44546fb6fb186d65 511 SMART SM00382 13 211 4.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4256 af025d50c4e8829f44546fb6fb186d65 511 SMART SM00382 287 479 1.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0221 01023b99c050207aa05fde07e87da268 527 Pfam PF04972 BON domain 137 196 1.1E-8 T 14-10-2018 IPR007055 BON domain Atu0221 01023b99c050207aa05fde07e87da268 527 PRINTS PR00811 Bacterial general secretion pathway protein D signature 293 317 1.6E-8 T 14-10-2018 IPR001775 GspD/PilQ family Atu0221 01023b99c050207aa05fde07e87da268 527 PRINTS PR00811 Bacterial general secretion pathway protein D signature 462 476 1.6E-8 T 14-10-2018 IPR001775 GspD/PilQ family Atu0221 01023b99c050207aa05fde07e87da268 527 PRINTS PR00811 Bacterial general secretion pathway protein D signature 439 457 1.6E-8 T 14-10-2018 IPR001775 GspD/PilQ family Atu0221 01023b99c050207aa05fde07e87da268 527 PRINTS PR00811 Bacterial general secretion pathway protein D signature 228 238 1.6E-8 T 14-10-2018 IPR001775 GspD/PilQ family Atu0221 01023b99c050207aa05fde07e87da268 527 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 420 453 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Atu0221 01023b99c050207aa05fde07e87da268 527 Pfam PF13629 Pilus formation protein N terminal region 65 132 6.8E-19 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal Atu0221 01023b99c050207aa05fde07e87da268 527 Pfam PF00263 Bacterial type II and III secretion system protein 297 475 6.5E-38 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 Atu4053 0f75a2f9596596192ed8ddb280af66ba 332 SUPERFAMILY SSF53448 11 255 2.53E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4053 0f75a2f9596596192ed8ddb280af66ba 332 Pfam PF00535 Glycosyl transferase family 2 13 180 8.1E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4053 0f75a2f9596596192ed8ddb280af66ba 332 Gene3D G3DSA:3.90.550.10 10 222 1.3E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3618 32d6fb78f1a0af65955804411bcb95ce 212 Pfam PF02592 Putative vitamin uptake transporter 43 195 4.0E-25 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Atu3618 32d6fb78f1a0af65955804411bcb95ce 212 Hamap MF_02088 Probable queuosine precursor transporter. 6 210 14.894 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Atu3618 32d6fb78f1a0af65955804411bcb95ce 212 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 87 195 3.3E-15 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Atu4310 b637702b370cb9d8f9d17b15f2fe32ec 417 Pfam PF01266 FAD dependent oxidoreductase 34 380 1.5E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu4310 b637702b370cb9d8f9d17b15f2fe32ec 417 Gene3D G3DSA:3.30.9.10 115 347 7.7E-107 T 14-10-2018 Atu4310 b637702b370cb9d8f9d17b15f2fe32ec 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 409 7.1E-212 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4310 b637702b370cb9d8f9d17b15f2fe32ec 417 SUPERFAMILY SSF51905 32 405 3.33E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4310 b637702b370cb9d8f9d17b15f2fe32ec 417 Gene3D G3DSA:3.50.50.60 34 391 7.7E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0135 2a579d5b130197f1aac16dfb5f59a3b0 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 44.72 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Atu0135 2a579d5b130197f1aac16dfb5f59a3b0 209 Gene3D G3DSA:3.40.50.2020 3 209 2.0E-76 T 14-10-2018 Atu0135 2a579d5b130197f1aac16dfb5f59a3b0 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.8E-70 T 14-10-2018 Atu0135 2a579d5b130197f1aac16dfb5f59a3b0 209 SUPERFAMILY SSF53271 4 207 2.23E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu0135 2a579d5b130197f1aac16dfb5f59a3b0 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 2.1E-83 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 TIGRFAM TIGR00109 hemH: ferrochelatase 18 340 9.1E-88 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 Gene3D G3DSA:3.40.50.1400 182 321 4.6E-93 T 14-10-2018 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 Hamap MF_00323 Ferrochelatase [hemH]. 18 340 36.975 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 SUPERFAMILY SSF53800 18 344 1.6E-102 T 14-10-2018 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 ProSitePatterns PS00534 Ferrochelatase signature. 209 228 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 Pfam PF00762 Ferrochelatase 19 339 4.5E-106 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Atu3771 c64a2054c3ee8706a5d1531d781164f0 344 Gene3D G3DSA:3.40.50.1400 19 341 4.6E-93 T 14-10-2018 Atu4156 f9c396eb50c43bba16c5db6faa3371a0 276 Pfam PF00005 ABC transporter 54 186 9.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4156 f9c396eb50c43bba16c5db6faa3371a0 276 Gene3D G3DSA:3.40.50.300 21 244 5.4E-64 T 14-10-2018 Atu4156 f9c396eb50c43bba16c5db6faa3371a0 276 SMART SM00382 63 236 5.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4156 f9c396eb50c43bba16c5db6faa3371a0 276 SUPERFAMILY SSF52540 40 240 1.38E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4156 f9c396eb50c43bba16c5db6faa3371a0 276 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Pfam PF00873 AcrB/AcrD/AcrF family 3 1008 2.4E-292 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:3.30.70.1320 134 325 1.7E-287 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82714 182 264 1.12E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82693 654 838 2.2E-7 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82693 553 648 4.19E-11 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:3.30.70.1430 39 798 1.7E-287 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82866 818 1009 1.09E-40 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82714 705 787 2.09E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:3.30.2090.10 701 790 1.7E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82866 289 487 1.44E-45 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:3.30.2090.10 178 268 1.7E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82693 135 323 1.8E-22 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:1.20.1640.10 9 500 1.7E-287 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:1.20.1640.10 501 1006 1.7E-287 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 SUPERFAMILY SSF82693 39 129 5.49E-20 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:3.30.70.1430 555 648 1.7E-287 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 Gene3D G3DSA:3.30.70.1440 649 848 1.7E-287 T 14-10-2018 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 606 620 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu3274 1f48de331e84dd298da9cec9c9a5d16f 1046 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.9E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 Gene3D G3DSA:3.30.565.10 311 466 9.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 Gene3D G3DSA:1.10.287.130 213 304 5.6E-25 T 14-10-2018 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 SUPERFAMILY SSF55785 107 217 8.67E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 306 3.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 SUPERFAMILY SSF55874 295 462 5.24E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 Gene3D G3DSA:3.30.450.20 100 212 4.1E-5 T 14-10-2018 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 SMART SM00388 237 306 2.1E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 SUPERFAMILY SSF47384 221 307 7.06E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 462 9.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0921 1a99fe00f309743a7f8eaa7b0d724696 510 SMART SM00387 352 464 1.9E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 6.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 Gene3D G3DSA:1.10.10.10 11 96 4.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 Gene3D G3DSA:3.40.190.10 107 291 1.6E-55 T 14-10-2018 Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 Pfam PF03466 LysR substrate binding domain 95 292 8.5E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 Gene3D G3DSA:3.40.190.10 167 264 1.6E-55 T 14-10-2018 Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 SUPERFAMILY SSF46785 7 118 1.47E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2559 282fed532045d0d0981d4ae3f5e72d8c 308 SUPERFAMILY SSF53850 97 295 4.34E-38 T 14-10-2018 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Gene3D G3DSA:1.10.260.30 310 446 4.1E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 456 32.1 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 SMART SM00963 1 86 1.5E-34 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Gene3D G3DSA:1.20.120.140 4 306 8.8E-117 T 14-10-2018 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Pfam PF02978 Signal peptide binding domain 327 427 8.7E-29 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 SMART SM00962 100 296 1.0E-107 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.3E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 SUPERFAMILY SSF47446 327 431 2.94E-33 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Gene3D G3DSA:3.40.50.300 90 285 8.8E-117 T 14-10-2018 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 5.0E-68 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 4.2E-181 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 SMART SM00382 99 301 3.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 SUPERFAMILY SSF52540 42 354 5.31E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2697 661e7fa97973c17ec0d05a78064dfb0b 523 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Atu0165 289b02cc00ec375d477319fbfbd5cf86 81 SMART SM00421 14 71 0.0044 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0165 289b02cc00ec375d477319fbfbd5cf86 81 SUPERFAMILY SSF46894 8 78 4.42E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0165 289b02cc00ec375d477319fbfbd5cf86 81 Gene3D G3DSA:1.10.10.10 13 77 1.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0165 289b02cc00ec375d477319fbfbd5cf86 81 Pfam PF00196 Bacterial regulatory proteins, luxR family 16 71 1.1E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 Gene3D G3DSA:1.10.8.450 245 277 3.2E-69 T 14-10-2018 Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 SMART SM00062 28 251 0.0043 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 SUPERFAMILY SSF53850 27 255 1.78E-43 T 14-10-2018 Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 Gene3D G3DSA:3.40.190.10 42 309 3.2E-69 T 14-10-2018 Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 Gene3D G3DSA:3.40.190.10 114 213 3.2E-69 T 14-10-2018 Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 318 1.2E-59 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 Atu6059 2c77f2dd543898d0a1b781d0c8e55127 320 Pfam PF09084 NMT1/THI5 like 41 252 2.8E-22 T 14-10-2018 IPR015168 SsuA/THI5-like Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 4.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 5.4E-60 T 14-10-2018 Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 Gene3D G3DSA:3.40.50.720 2 250 2.0E-78 T 14-10-2018 Atu4086 82df228c8e02dc1895d14d8188f92c8e 251 SUPERFAMILY SSF51735 6 249 3.25E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0174 c403f1fcfc81c285619e13588b3fc482 286 SMART SM00382 27 245 8.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0174 c403f1fcfc81c285619e13588b3fc482 286 SUPERFAMILY SSF52540 4 235 4.28E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0174 c403f1fcfc81c285619e13588b3fc482 286 Pfam PF00005 ABC transporter 19 174 1.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0174 c403f1fcfc81c285619e13588b3fc482 286 Gene3D G3DSA:3.40.50.300 3 276 6.8E-68 T 14-10-2018 Atu0174 c403f1fcfc81c285619e13588b3fc482 286 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0174 c403f1fcfc81c285619e13588b3fc482 286 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 243 6.7E-96 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Atu3952 bc9c3da55fe4bd8f9193539071cb0e85 442 Gene3D G3DSA:3.50.50.60 376 418 2.2E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3952 bc9c3da55fe4bd8f9193539071cb0e85 442 Gene3D G3DSA:3.30.9.10 334 375 2.2E-19 T 14-10-2018 Atu3952 bc9c3da55fe4bd8f9193539071cb0e85 442 SUPERFAMILY SSF51905 18 431 4.27E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3952 bc9c3da55fe4bd8f9193539071cb0e85 442 Gene3D G3DSA:3.30.9.10 98 269 5.9E-64 T 14-10-2018 Atu3952 bc9c3da55fe4bd8f9193539071cb0e85 442 Gene3D G3DSA:3.50.50.60 19 233 5.9E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3952 bc9c3da55fe4bd8f9193539071cb0e85 442 Pfam PF01266 FAD dependent oxidoreductase 19 412 2.6E-67 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3316 6ecd44fbb76c5fa4fdcd0c2e5f63fd61 340 SUPERFAMILY SSF51735 20 328 1.1E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3316 6ecd44fbb76c5fa4fdcd0c2e5f63fd61 340 Gene3D G3DSA:3.90.25.10 204 327 2.7E-99 T 14-10-2018 Atu3316 6ecd44fbb76c5fa4fdcd0c2e5f63fd61 340 Gene3D G3DSA:3.40.50.720 24 314 2.7E-99 T 14-10-2018 Atu3316 6ecd44fbb76c5fa4fdcd0c2e5f63fd61 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 25 258 4.0E-48 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 SMART SM00320 199 237 64.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 SMART SM00320 155 191 48.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 SMART SM00320 113 151 95.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 SMART SM00320 288 327 8.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 Gene3D G3DSA:2.130.10.10 250 330 2.4E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 Pfam PF12894 Anaphase-promoting complex subunit 4 WD40 domain 264 328 1.9E-4 T 14-10-2018 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 Gene3D G3DSA:2.130.10.10 10 245 8.3E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atu4501 26aa3dfc0b60d4d5676fec4c43b92f43 330 SUPERFAMILY SSF50998 10 328 1.1E-23 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atu4647 abd8123854df85813a212211114d8904 317 Gene3D G3DSA:3.40.190.100 117 226 3.7E-85 T 14-10-2018 Atu4647 abd8123854df85813a212211114d8904 317 Gene3D G3DSA:3.40.190.10 36 296 3.7E-85 T 14-10-2018 Atu4647 abd8123854df85813a212211114d8904 317 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 287 9.5E-56 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu4647 abd8123854df85813a212211114d8904 317 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 27 314 4.5E-134 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 Atu4647 abd8123854df85813a212211114d8904 317 SUPERFAMILY SSF53850 29 303 1.03E-80 T 14-10-2018 Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 Gene3D G3DSA:1.10.10.60 5 51 1.2E-21 T 14-10-2018 Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 SUPERFAMILY SSF46689 2 67 1.74E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 SUPERFAMILY SSF48498 71 177 8.4E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu5443 102aaad3069531a2c3fde56b5e5d6ec0 182 Gene3D G3DSA:1.10.357.10 52 177 4.8E-31 T 14-10-2018 Atu0206 27e3c4f3604a5c52ae02d790e7ee1e10 105 Gene3D G3DSA:3.30.70.100 1 105 4.9E-29 T 14-10-2018 Atu0206 27e3c4f3604a5c52ae02d790e7ee1e10 105 SUPERFAMILY SSF54909 7 95 1.15E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0206 27e3c4f3604a5c52ae02d790e7ee1e10 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 82 1.6E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu4687 af75a2fbfd029c1c05c81794cfcb8125 267 Gene3D G3DSA:3.40.190.10 38 256 8.2E-53 T 14-10-2018 Atu4687 af75a2fbfd029c1c05c81794cfcb8125 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 258 8.9E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4687 af75a2fbfd029c1c05c81794cfcb8125 267 SUPERFAMILY SSF53850 31 261 4.63E-55 T 14-10-2018 Atu4687 af75a2fbfd029c1c05c81794cfcb8125 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Atu4687 af75a2fbfd029c1c05c81794cfcb8125 267 Gene3D G3DSA:3.40.190.10 124 222 8.2E-53 T 14-10-2018 Atu4687 af75a2fbfd029c1c05c81794cfcb8125 267 SMART SM00062 40 260 7.1E-48 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu2761 d95a360a534676b61e92a42585680398 267 Gene3D G3DSA:3.60.10.10 4 266 2.6E-56 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu2761 d95a360a534676b61e92a42585680398 267 SUPERFAMILY SSF56219 3 266 3.01E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu2761 d95a360a534676b61e92a42585680398 267 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 236 4.2E-17 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atu2761 d95a360a534676b61e92a42585680398 267 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 5 265 1.9E-52 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Atu2761 d95a360a534676b61e92a42585680398 267 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Atu0930 a5e1b92a2b790007da3537c01383e8b7 481 Pfam PF13372 Alginate export 300 463 1.4E-10 T 14-10-2018 IPR025388 Alginate export domain Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 222 1.7E-12 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 Gene3D G3DSA:1.20.140.10 242 390 2.9E-23 T 14-10-2018 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 PIRSF PIRSF016578 4 392 2.1E-26 T 14-10-2018 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 100 1.6E-4 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 Gene3D G3DSA:1.10.540.10 6 116 1.1E-19 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 Gene3D G3DSA:2.40.110.10 144 236 5.3E-20 T 14-10-2018 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 SUPERFAMILY SSF47203 251 386 4.03E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 253 372 4.4E-11 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Atu3431 564b59e93edfe24ec9548b560d7d9d60 392 SUPERFAMILY SSF56645 14 231 3.8E-38 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu2369 dd1569baf3649837651a628c9c81eaf4 382 SUPERFAMILY SSF55729 25 111 2.34E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2369 dd1569baf3649837651a628c9c81eaf4 382 Pfam PF13527 Acetyltransferase (GNAT) domain 25 111 1.9E-6 T 14-10-2018 Atu5113 ecc1cb2b6d9e6dad242353ce4d855086 92 Gene3D G3DSA:1.10.260.40 27 86 4.1E-12 T 14-10-2018 Atu5113 ecc1cb2b6d9e6dad242353ce4d855086 92 Pfam PF01381 Helix-turn-helix 36 85 5.9E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu5113 ecc1cb2b6d9e6dad242353ce4d855086 92 SUPERFAMILY SSF47413 30 88 5.36E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu5113 ecc1cb2b6d9e6dad242353ce4d855086 92 SMART SM00530 33 88 1.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00412 Epoxide hydrolase signature 94 107 1.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00412 Epoxide hydrolase signature 28 46 1.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00412 Epoxide hydrolase signature 297 319 1.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00412 Epoxide hydrolase signature 48 63 1.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00412 Epoxide hydrolase signature 108 121 1.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00412 Epoxide hydrolase signature 259 275 1.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 Pfam PF00561 alpha/beta hydrolase fold 22 308 6.8E-32 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 8.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 8.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 8.4E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 Gene3D G3DSA:3.40.50.1820 1 323 2.8E-94 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3664 5f952609b320bfec55393aac9d1ba0eb 323 SUPERFAMILY SSF53474 6 322 4.4E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu6058 f47973a38410b4321a405f3ad3405873 267 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6058 f47973a38410b4321a405f3ad3405873 267 SMART SM00382 51 230 9.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6058 f47973a38410b4321a405f3ad3405873 267 SUPERFAMILY SSF52540 22 253 6.96E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6058 f47973a38410b4321a405f3ad3405873 267 Gene3D G3DSA:3.40.50.300 20 254 1.7E-61 T 14-10-2018 Atu6058 f47973a38410b4321a405f3ad3405873 267 Pfam PF00005 ABC transporter 42 179 5.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3052 12bca02c18899e8863ff5eb96fad0f24 161 Pfam PF01047 MarR family 56 106 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3052 12bca02c18899e8863ff5eb96fad0f24 161 SMART SM00347 41 143 8.7E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3052 12bca02c18899e8863ff5eb96fad0f24 161 Gene3D G3DSA:1.10.10.10 11 157 8.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3052 12bca02c18899e8863ff5eb96fad0f24 161 SUPERFAMILY SSF46785 11 156 2.73E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2439 b2711203067196c05132e56b1f614f5e 196 PIRSF PIRSF033924 1 196 1.1E-101 T 14-10-2018 IPR008325 Uncharacterised conserved protein UCP033924 Atu2439 b2711203067196c05132e56b1f614f5e 196 Pfam PF06577 Protein of unknown function (DUF1134) 37 196 6.9E-74 T 14-10-2018 IPR008325 Uncharacterised conserved protein UCP033924 Atu0677 ca21616a13afdcfe2cd5bcb3f3cd93fd 122 Gene3D G3DSA:3.10.180.10 7 119 1.4E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0677 ca21616a13afdcfe2cd5bcb3f3cd93fd 122 SUPERFAMILY SSF54593 3 121 4.43E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0677 ca21616a13afdcfe2cd5bcb3f3cd93fd 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 116 1.7E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0330 e953d298c009ef2a6ce48806b0298a2f 153 SUPERFAMILY SSF55804 1 147 4.06E-44 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Atu0330 e953d298c009ef2a6ce48806b0298a2f 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 2.3E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain Atu0330 e953d298c009ef2a6ce48806b0298a2f 153 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 146 3.7E-51 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 Atu0330 e953d298c009ef2a6ce48806b0298a2f 153 Gene3D G3DSA:3.40.930.10 1 152 8.8E-51 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Atu0330 e953d298c009ef2a6ce48806b0298a2f 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain Atu3255 9aeb596880110d53c944994ac1a6ab82 447 PIRSF PIRSF006066 1 213 4.9E-60 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3255 9aeb596880110d53c944994ac1a6ab82 447 PIRSF PIRSF006066 217 446 2.2E-65 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3255 9aeb596880110d53c944994ac1a6ab82 447 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 1 435 6.3E-134 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu0072 2d7ef829c84684ef0dac110899146488 411 PIRSF PIRSF033909 35 395 4.2E-125 T 14-10-2018 IPR014586 Uncharacterised conserved protein UCP033909 Atu0072 2d7ef829c84684ef0dac110899146488 411 Gene3D G3DSA:3.40.50.1820 163 345 1.0E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0072 2d7ef829c84684ef0dac110899146488 411 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 158 369 2.4E-76 T 14-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like Atu0072 2d7ef829c84684ef0dac110899146488 411 SUPERFAMILY SSF53474 158 277 3.52E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 Pfam PF00875 DNA photolyase 8 164 3.0E-48 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 Pfam PF03441 FAD binding domain of DNA photolyase 274 473 2.6E-88 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 Gene3D G3DSA:1.10.579.10 292 479 1.5E-87 T 14-10-2018 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 SUPERFAMILY SSF52425 7 208 8.9E-56 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 Gene3D G3DSA:3.40.50.620 9 206 1.0E-114 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 PRINTS PR00147 DNA photolyase signature 323 339 1.1E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 PRINTS PR00147 DNA photolyase signature 343 361 1.1E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 PRINTS PR00147 DNA photolyase signature 382 396 1.1E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 PRINTS PR00147 DNA photolyase signature 141 157 1.1E-24 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 SUPERFAMILY SSF48173 193 477 7.98E-115 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 Gene3D G3DSA:1.25.40.80 130 288 1.0E-114 T 14-10-2018 Atu1218 0feb2d5dbf49cf14e0964a0357823c9f 479 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Atu5218 cba2f7216f75fd03e332753b53c159b5 363 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5218 cba2f7216f75fd03e332753b53c159b5 363 SUPERFAMILY SSF54631 269 348 2.36E-10 T 14-10-2018 Atu5218 cba2f7216f75fd03e332753b53c159b5 363 SMART SM00382 15 204 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5218 cba2f7216f75fd03e332753b53c159b5 363 SUPERFAMILY SSF52540 3 226 4.84E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5218 cba2f7216f75fd03e332753b53c159b5 363 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 4 349 4.8E-110 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Atu5218 cba2f7216f75fd03e332753b53c159b5 363 Pfam PF00005 ABC transporter 6 154 6.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5218 cba2f7216f75fd03e332753b53c159b5 363 Gene3D G3DSA:3.10.580.10 265 350 3.4E-7 T 14-10-2018 Atu5218 cba2f7216f75fd03e332753b53c159b5 363 Gene3D G3DSA:3.40.50.300 2 264 2.8E-77 T 14-10-2018 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Gene3D G3DSA:3.90.1310.20 54 297 7.4E-85 T 14-10-2018 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 SUPERFAMILY SSF53955 43 257 7.31E-70 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Gene3D G3DSA:3.40.710.10 298 314 7.4E-85 T 14-10-2018 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Pfam PF17092 Penicillin-binding protein OB-like domain 322 437 2.7E-19 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 734 2.0E-185 T 14-10-2018 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Gene3D G3DSA:2.40.50.140 332 428 4.0E-8 T 14-10-2018 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Pfam PF00905 Penicillin binding protein transpeptidase domain 439 728 5.4E-38 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Gene3D G3DSA:1.10.3810.10 66 261 7.4E-85 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 SUPERFAMILY SSF56601 215 787 4.48E-133 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Pfam PF00912 Transglycosylase 56 233 1.4E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu1341 b418cc4f8843924cd5ca4c079ac35ceb 815 Gene3D G3DSA:3.40.710.10 429 775 2.6E-105 T 14-10-2018 Atu3667 392b75073742390272f15d73db7c0bc7 155 SUPERFAMILY SSF50692 2 119 5.59E-41 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu3667 392b75073742390272f15d73db7c0bc7 155 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 49.381 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atu3667 392b75073742390272f15d73db7c0bc7 155 Pfam PF02261 Aspartate decarboxylase 2 113 1.2E-37 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atu3667 392b75073742390272f15d73db7c0bc7 155 Gene3D G3DSA:2.40.40.20 1 124 4.3E-37 T 14-10-2018 Atu3667 392b75073742390272f15d73db7c0bc7 155 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 4 98 3.0E-51 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Atu1834 a6dd472cc905a685c400d16a1729f76b 147 Gene3D G3DSA:3.90.79.10 14 143 1.2E-36 T 14-10-2018 Atu1834 a6dd472cc905a685c400d16a1729f76b 147 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu1834 a6dd472cc905a685c400d16a1729f76b 147 Pfam PF00293 NUDIX domain 17 138 1.1E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu1834 a6dd472cc905a685c400d16a1729f76b 147 SUPERFAMILY SSF55811 14 142 1.9E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu0180 1c2fcb45af0238b4a9f7a07513ae27c7 203 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 12 198 3.5E-62 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Atu0180 1c2fcb45af0238b4a9f7a07513ae27c7 203 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 12 197 8.3E-62 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Atu0180 1c2fcb45af0238b4a9f7a07513ae27c7 203 PIRSF PIRSF020680 4 203 3.8E-62 T 14-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Atu0180 1c2fcb45af0238b4a9f7a07513ae27c7 203 SUPERFAMILY SSF159709 18 199 1.44E-60 T 14-10-2018 IPR038058 PhnH-like superfamily Atu0180 1c2fcb45af0238b4a9f7a07513ae27c7 203 Gene3D G3DSA:3.40.50.11310 8 200 7.0E-60 T 14-10-2018 IPR038058 PhnH-like superfamily Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 Gene3D G3DSA:3.20.20.70 1 302 1.1E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 Pfam PF00701 Dihydrodipicolinate synthetase family 5 294 8.3E-45 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 SUPERFAMILY SSF51569 2 296 6.7E-73 T 14-10-2018 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 3.4E-8 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 3.4E-8 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 3.4E-8 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 3.4E-8 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 PIRSF PIRSF001365 1 301 2.1E-64 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu0899 98c080b24cd71822c20a0d4e8225fe5f 302 SMART SM01130 4 296 1.9E-69 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4066 25d7dfd2c2da54dc8e95d8b57f46ecb0 417 SUPERFAMILY SSF54373 263 341 6.28E-6 T 14-10-2018 Atu4066 25d7dfd2c2da54dc8e95d8b57f46ecb0 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 409 3.6E-215 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4066 25d7dfd2c2da54dc8e95d8b57f46ecb0 417 SUPERFAMILY SSF51905 32 406 1.3E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4066 25d7dfd2c2da54dc8e95d8b57f46ecb0 417 Pfam PF01266 FAD dependent oxidoreductase 34 383 6.8E-58 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu4066 25d7dfd2c2da54dc8e95d8b57f46ecb0 417 Gene3D G3DSA:3.30.9.10 115 347 2.5E-102 T 14-10-2018 Atu4066 25d7dfd2c2da54dc8e95d8b57f46ecb0 417 Gene3D G3DSA:3.50.50.60 34 391 2.5E-102 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu8175 29c2b08606591ccda21066cf392d3568 936 SUPERFAMILY SSF52317 314 522 7.78E-8 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu8175 29c2b08606591ccda21066cf392d3568 936 Pfam PF13709 Domain of unknown function (DUF4159) 700 916 7.1E-60 T 14-10-2018 IPR025297 Domain of unknown function DUF4159 Atu8175 29c2b08606591ccda21066cf392d3568 936 Gene3D G3DSA:3.40.50.12140 695 918 4.3E-72 T 14-10-2018 Atu8175 29c2b08606591ccda21066cf392d3568 936 Pfam PF07584 Aerotolerance regulator N-terminal 6 80 2.7E-17 T 14-10-2018 IPR024163 Aerotolerance regulator, N-terminal Atu8175 29c2b08606591ccda21066cf392d3568 936 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 7 85 1.2E-26 T 14-10-2018 IPR011933 Double transmembrane domain Atu4481 43466a918de88d94cc6cd4efff18a12a 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 Gene3D G3DSA:3.40.50.2300 167 313 3.6E-22 T 14-10-2018 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 Pfam PF13407 Periplasmic binding protein domain 65 319 3.1E-37 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4481 43466a918de88d94cc6cd4efff18a12a 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.3E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 6.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 6.4E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 Gene3D G3DSA:3.40.50.2300 58 154 8.0E-6 T 14-10-2018 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 SMART SM00354 2 72 1.3E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 SUPERFAMILY SSF53822 64 324 1.51E-35 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4481 43466a918de88d94cc6cd4efff18a12a 340 Gene3D G3DSA:1.10.260.40 1 57 3.8E-20 T 14-10-2018 Atu4481 43466a918de88d94cc6cd4efff18a12a 340 SUPERFAMILY SSF47413 2 59 4.5E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3548 92679864785243909665fa91538cb9ce 408 Gene3D G3DSA:3.40.50.2000 238 388 4.5E-13 T 14-10-2018 Atu3548 92679864785243909665fa91538cb9ce 408 Pfam PF13692 Glycosyl transferases group 1 239 370 1.7E-17 T 14-10-2018 Atu3548 92679864785243909665fa91538cb9ce 408 SUPERFAMILY SSF53756 2 396 3.27E-27 T 14-10-2018 Atu3548 92679864785243909665fa91538cb9ce 408 Pfam PF13439 Glycosyltransferase Family 4 21 228 1.1E-6 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 Gene3D G3DSA:3.30.540.10 5 152 3.9E-36 T 14-10-2018 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 Pfam PF00459 Inositol monophosphatase family 10 259 3.7E-43 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 SUPERFAMILY SSF56655 12 272 6.54E-62 T 14-10-2018 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 141 164 1.1E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 220 244 1.1E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 1.1E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 1.1E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 1.1E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 Gene3D G3DSA:3.40.190.80 162 275 2.1E-12 T 14-10-2018 Atu1857 befb0585048d1ca103f4ef58c9d28088 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu1564 8be5fea5af13991f24d730e1775423b5 290 Gene3D G3DSA:3.40.50.300 57 198 7.1E-8 T 14-10-2018 Atu1564 8be5fea5af13991f24d730e1775423b5 290 SUPERFAMILY SSF52540 44 197 2.56E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1564 8be5fea5af13991f24d730e1775423b5 290 Pfam PF05673 Protein of unknown function (DUF815) 36 283 2.5E-103 T 14-10-2018 IPR008533 Domain of unknown function DUF815 Atu0698 980b3f917d5873bf156332bebaf9da89 77 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 23 63 1.3E-23 T 14-10-2018 IPR018661 Protein of unknown function DUF2093 Atu3278 bc49f7cc1099f2c934ee2bf411ff7730 297 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 144 161 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Atu3278 bc49f7cc1099f2c934ee2bf411ff7730 297 SUPERFAMILY SSF51430 3 291 3.54E-74 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3278 bc49f7cc1099f2c934ee2bf411ff7730 297 PRINTS PR00069 Aldo-keto reductase signature 113 131 8.4E-9 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3278 bc49f7cc1099f2c934ee2bf411ff7730 297 PRINTS PR00069 Aldo-keto reductase signature 144 161 8.4E-9 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3278 bc49f7cc1099f2c934ee2bf411ff7730 297 Gene3D G3DSA:3.20.20.100 2 297 1.1E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3278 bc49f7cc1099f2c934ee2bf411ff7730 297 Pfam PF00248 Aldo/keto reductase family 14 287 2.1E-57 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu0906 343f0c3e4a75bc133de2e63e29392eff 222 Pfam PF03006 Haemolysin-III related 20 208 3.1E-26 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Atu0800 ab072d70419d849bd0d3dfb5490e5ae5 226 Gene3D G3DSA:3.40.30.10 49 226 1.1E-48 T 14-10-2018 Atu0800 ab072d70419d849bd0d3dfb5490e5ae5 226 SUPERFAMILY SSF52833 56 223 2.56E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0800 ab072d70419d849bd0d3dfb5490e5ae5 226 Pfam PF13462 Thioredoxin 61 224 7.0E-48 T 14-10-2018 IPR012336 Thioredoxin-like fold Atu2260 9f36d25f5898fe76e752ea4187d7110b 189 SUPERFAMILY SSF55729 13 132 1.92E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2260 9f36d25f5898fe76e752ea4187d7110b 189 Gene3D G3DSA:3.40.630.30 9 170 2.4E-28 T 14-10-2018 Atu2260 9f36d25f5898fe76e752ea4187d7110b 189 Pfam PF00583 Acetyltransferase (GNAT) family 19 114 7.1E-9 T 14-10-2018 IPR000182 GNAT domain Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 PRINTS PR00062 Ribosomal protein L20 signature 12 41 8.3E-32 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 PRINTS PR00062 Ribosomal protein L20 signature 75 101 8.3E-32 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 PRINTS PR00062 Ribosomal protein L20 signature 42 71 8.3E-32 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 Gene3D G3DSA:1.10.1900.20 56 119 1.1E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 Pfam PF00453 Ribosomal protein L20 3 109 7.9E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 3.0E-22 T 14-10-2018 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 SUPERFAMILY SSF74731 3 117 2.09E-46 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.3E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 Gene3D G3DSA:1.10.720.90 2 55 6.3E-19 T 14-10-2018 Atu0256 656bfe04552ff8eb89b4e7e02a255531 134 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.851 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1546 ff1a0b20332bcb48053399549964d126 128 SMART SM00422 5 72 2.1E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1546 ff1a0b20332bcb48053399549964d126 128 Gene3D G3DSA:1.10.1660.10 4 124 2.2E-25 T 14-10-2018 Atu1546 ff1a0b20332bcb48053399549964d126 128 SUPERFAMILY SSF46955 3 117 4.76E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu1546 ff1a0b20332bcb48053399549964d126 128 Pfam PF13411 MerR HTH family regulatory protein 5 69 1.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 Pfam PF13377 Periplasmic binding protein-like domain 172 334 1.4E-27 T 14-10-2018 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 SUPERFAMILY SSF47413 2 57 2.6E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 SMART SM00354 1 70 7.0E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 47 6.4E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 Gene3D G3DSA:3.40.50.2300 73 316 1.0E-62 T 14-10-2018 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 Gene3D G3DSA:1.10.260.40 1 57 1.1E-16 T 14-10-2018 Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 SUPERFAMILY SSF53822 61 335 3.0E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3337 092f2aef36366c7ec4bc972e1a851f81 337 Gene3D G3DSA:3.40.50.2300 162 294 1.0E-62 T 14-10-2018 Atu4515 a98a0a7ade7437899b035c33db06f8b7 238 SMART SM00382 30 211 6.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4515 a98a0a7ade7437899b035c33db06f8b7 238 Pfam PF00005 ABC transporter 22 161 4.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4515 a98a0a7ade7437899b035c33db06f8b7 238 Gene3D G3DSA:3.40.50.300 4 235 6.9E-58 T 14-10-2018 Atu4515 a98a0a7ade7437899b035c33db06f8b7 238 SUPERFAMILY SSF52540 6 231 2.41E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2741 d3bb4c05a44f563f0ca8e7e23aef47f1 386 Gene3D G3DSA:3.90.850.10 143 366 5.6E-39 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu2741 d3bb4c05a44f563f0ca8e7e23aef47f1 386 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 218 360 2.2E-5 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Atu2741 d3bb4c05a44f563f0ca8e7e23aef47f1 386 SUPERFAMILY SSF56529 157 366 9.81E-26 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu3490 02b2f9831dca5462e6b99e87cf3d4be1 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 321 3.0E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu3925 f05193be134174a8027b6b9630fb5a6a 462 Pfam PF13454 FAD-NAD(P)-binding 6 153 4.8E-34 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Atu3925 f05193be134174a8027b6b9630fb5a6a 462 Pfam PF00890 FAD binding domain 396 427 1.9E-4 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu3925 f05193be134174a8027b6b9630fb5a6a 462 SUPERFAMILY SSF51905 1 446 6.48E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 SUPERFAMILY SSF53850 44 529 5.07E-100 T 14-10-2018 Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 Gene3D G3DSA:3.40.190.10 205 515 2.2E-97 T 14-10-2018 Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 Gene3D G3DSA:3.90.76.10 51 204 2.2E-97 T 14-10-2018 Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 110 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 449 6.4E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 Gene3D G3DSA:3.10.105.10 283 505 2.2E-97 T 14-10-2018 Atu3041 a9fe7e8474b633eaa5aa875c27fd0e5d 537 PIRSF PIRSF002741 2 525 4.0E-73 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 Pfam PF04679 ATP dependent DNA ligase C terminal region 424 521 4.6E-11 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 Pfam PF04675 DNA ligase N terminus 3 160 2.4E-7 T 14-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 Gene3D G3DSA:3.30.470.30 204 403 3.5E-39 T 14-10-2018 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 536 2.0E-243 T 14-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 Pfam PF01068 ATP dependent DNA ligase domain 207 403 9.6E-26 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 Gene3D G3DSA:2.40.50.140 407 539 6.7E-29 T 14-10-2018 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 SUPERFAMILY SSF50249 408 537 6.34E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 228 236 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Atu0840 2df1228680f7e5b78513c36ecc4675c7 541 SUPERFAMILY SSF56091 203 403 1.7E-45 T 14-10-2018 Atu3168 d08ad4254cecd827908f5cc244ba99f5 290 SUPERFAMILY SSF161098 55 278 7.33E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu3168 d08ad4254cecd827908f5cc244ba99f5 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 288 2.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3168 d08ad4254cecd827908f5cc244ba99f5 290 Gene3D G3DSA:1.10.3720.10 49 287 1.4E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu5051 9d5ff487d810364962b10f781f81aba3 345 SUPERFAMILY SSF50249 233 332 6.85E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu5051 9d5ff487d810364962b10f781f81aba3 345 Gene3D G3DSA:3.30.1490.70 53 224 3.8E-50 T 14-10-2018 Atu5051 9d5ff487d810364962b10f781f81aba3 345 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 42 339 4.4E-103 T 14-10-2018 IPR014146 DNA ligase D, ligase domain Atu5051 9d5ff487d810364962b10f781f81aba3 345 Pfam PF04679 ATP dependent DNA ligase C terminal region 245 332 9.8E-19 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Atu5051 9d5ff487d810364962b10f781f81aba3 345 Gene3D G3DSA:3.30.470.30 65 183 3.8E-50 T 14-10-2018 Atu5051 9d5ff487d810364962b10f781f81aba3 345 Gene3D G3DSA:2.40.50.140 229 341 2.3E-24 T 14-10-2018 Atu5051 9d5ff487d810364962b10f781f81aba3 345 SUPERFAMILY SSF56091 21 227 4.73E-49 T 14-10-2018 Atu5051 9d5ff487d810364962b10f781f81aba3 345 Pfam PF01068 ATP dependent DNA ligase domain 54 226 7.0E-32 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Atu4730 7cf07a8a4576b373d379ce85320bb7fb 316 Pfam PF05229 Spore Coat Protein U domain 185 313 1.1E-35 T 14-10-2018 IPR007893 Spore coat protein U Atu4730 7cf07a8a4576b373d379ce85320bb7fb 316 Pfam PF05229 Spore Coat Protein U domain 13 153 3.7E-25 T 14-10-2018 IPR007893 Spore coat protein U Atu4730 7cf07a8a4576b373d379ce85320bb7fb 316 SMART SM00972 92 158 1.4E-4 T 14-10-2018 IPR007893 Spore coat protein U Atu4730 7cf07a8a4576b373d379ce85320bb7fb 316 SMART SM00972 256 313 3.6E-20 T 14-10-2018 IPR007893 Spore coat protein U Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 79 2.7E-21 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 Gene3D G3DSA:3.30.300.30 518 651 2.4E-26 T 14-10-2018 Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 Gene3D G3DSA:3.40.50.12780 52 515 7.0E-102 T 14-10-2018 Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 643 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 645 52.563 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 SUPERFAMILY SSF56801 13 644 3.92E-175 T 14-10-2018 Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 9.9E-26 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu2745 24b3210c1494865c7bf26dc266ffdf1e 651 Pfam PF00501 AMP-binding enzyme 81 522 5.4E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 14-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 Gene3D G3DSA:2.30.40.10 5 481 8.1E-293 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 7.7E-57 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 SUPERFAMILY SSF51338 4 175 2.55E-62 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 Gene3D G3DSA:3.20.20.140 131 569 8.1E-293 T 14-10-2018 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 2.8E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 2.8E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 428 441 2.8E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 402 417 2.8E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 ProSitePatterns PS00145 Urease active site. 318 334 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 2.5E-296 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 SUPERFAMILY SSF51556 132 569 2.45E-193 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 Pfam PF01979 Amidohydrolase family 127 450 1.2E-74 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 SUPERFAMILY SSF51338 416 478 5.94E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2401 ac004dd4cb6b05ad819f80dda8f44632 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 55.699 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2633 ccafa0ac4c57cb67c94e93ce828452ba 204 Pfam PF01810 LysE type translocator 6 201 1.1E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu2633 ccafa0ac4c57cb67c94e93ce828452ba 204 PIRSF PIRSF006324 1 203 3.4E-47 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu4759 c656382e8b75c758655ac19b2ce62223 331 Gene3D G3DSA:3.40.50.1100 17 318 4.1E-106 T 14-10-2018 Atu4759 c656382e8b75c758655ac19b2ce62223 331 SUPERFAMILY SSF53686 14 325 8.51E-86 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu4759 c656382e8b75c758655ac19b2ce62223 331 Gene3D G3DSA:3.40.50.1100 60 156 4.1E-106 T 14-10-2018 Atu4759 c656382e8b75c758655ac19b2ce62223 331 TIGRFAM TIGR02991 ectoine_eutB: ectoine utilization protein EutB 12 328 1.2E-175 T 14-10-2018 IPR014333 Ectoine utilization protein EutB KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atu4759 c656382e8b75c758655ac19b2ce62223 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 314 1.9E-77 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu5437 7b06f718cdd07bb3e18da64d974dc1b3 130 SUPERFAMILY SSF46785 19 124 7.74E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5437 7b06f718cdd07bb3e18da64d974dc1b3 130 Gene3D G3DSA:1.10.10.10 5 127 8.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5437 7b06f718cdd07bb3e18da64d974dc1b3 130 Pfam PF01638 HxlR-like helix-turn-helix 28 114 6.1E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 Hamap MF_01987 Ribokinase [rbsK]. 1 298 22.603 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 Gene3D G3DSA:3.40.1190.20 1 299 2.4E-85 T 14-10-2018 IPR029056 Ribokinase-like Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 PRINTS PR00990 Ribokinase signature 4 25 7.3E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 PRINTS PR00990 Ribokinase signature 102 115 7.3E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 PRINTS PR00990 Ribokinase signature 214 225 7.3E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 PRINTS PR00990 Ribokinase signature 170 185 7.3E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 PRINTS PR00990 Ribokinase signature 31 50 7.3E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 Pfam PF00294 pfkB family carbohydrate kinase 2 291 9.9E-56 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu0364 454dd502e5b2ba3246f0f9f9b25ec413 299 SUPERFAMILY SSF53613 2 298 1.42E-70 T 14-10-2018 IPR029056 Ribokinase-like Atu0772 740a797d0561a54f45451ec776eeb68f 128 Pfam PF06170 Protein of unknown function (DUF983) 32 116 5.1E-35 T 14-10-2018 IPR009325 Protein of unknown function DUF983 Atu1601 da470d3dcb230880747e3008e73c8b91 449 SMART SM00729 46 264 1.9E-53 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu1601 da470d3dcb230880747e3008e73c8b91 449 PIRSF PIRSF000167 1 449 1.7E-181 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Atu1601 da470d3dcb230880747e3008e73c8b91 449 Gene3D G3DSA:3.80.30.20 1 358 1.4E-105 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atu1601 da470d3dcb230880747e3008e73c8b91 449 Gene3D G3DSA:1.10.10.920 359 448 2.2E-18 T 14-10-2018 Atu1601 da470d3dcb230880747e3008e73c8b91 449 Pfam PF04055 Radical SAM superfamily 52 221 3.3E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu1601 da470d3dcb230880747e3008e73c8b91 449 SUPERFAMILY SSF102114 3 438 1.31E-120 T 14-10-2018 Atu1601 da470d3dcb230880747e3008e73c8b91 449 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 444 4.7E-133 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Atu8066 ac97d14e0481cd8326287d6edca0cf73 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.667 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8066 ac97d14e0481cd8326287d6edca0cf73 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 4.1E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8066 ac97d14e0481cd8326287d6edca0cf73 45 Pfam PF00468 Ribosomal protein L34 3 45 1.4E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8066 ac97d14e0481cd8326287d6edca0cf73 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 25 7.0E-6 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8066 ac97d14e0481cd8326287d6edca0cf73 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu4758 1dbade2f23c87849612761a2d0be9560 337 PIRSF PIRSF001439 4 329 7.1E-74 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Atu4758 1dbade2f23c87849612761a2d0be9560 337 Gene3D G3DSA:3.30.1780.10 7 324 2.4E-93 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Atu4758 1dbade2f23c87849612761a2d0be9560 337 SUPERFAMILY SSF51735 5 328 6.71E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4758 1dbade2f23c87849612761a2d0be9560 337 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 5 320 3.9E-104 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Atu4758 1dbade2f23c87849612761a2d0be9560 337 Gene3D G3DSA:3.40.50.720 129 302 2.4E-93 T 14-10-2018 Atu4758 1dbade2f23c87849612761a2d0be9560 337 TIGRFAM TIGR02992 ectoine_eutC: ectoine utilization protein EutC 4 328 5.4E-187 T 14-10-2018 IPR014334 Ectoine utilization protein EutC Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 SUPERFAMILY SSF52156 695 820 2.22E-36 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 SUPERFAMILY SSF52540 401 583 4.25E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 7 911 17.012 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 SUPERFAMILY SSF50447 815 911 1.77E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Gene3D G3DSA:2.40.30.10 815 912 6.6E-33 T 14-10-2018 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Gene3D G3DSA:2.40.30.10 583 702 3.5E-42 T 14-10-2018 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 413 568 8.5E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 335 385 1.7E-9 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Pfam PF11987 Translation-initiation factor 2 698 803 4.6E-39 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Pfam PF00009 Elongation factor Tu GTP binding domain 416 572 4.0E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 15 52 3.6E-7 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 SUPERFAMILY SSF50447 584 667 7.66E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Pfam PF03144 Elongation factor Tu domain 2 834 901 3.9E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 ProSitePatterns PS01176 Initiation factor 2 signature. 864 886 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Gene3D G3DSA:3.40.50.10050 707 814 7.9E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 Gene3D G3DSA:3.40.50.300 408 582 1.2E-71 T 14-10-2018 Atu0087 fd10abd4798bd4839a7c6e5c93bb3cef 913 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 330 913 5.5E-240 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 51 293 1.4E-106 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 Pfam PF00571 CBS domain 308 351 3.9E-5 T 14-10-2018 IPR000644 CBS domain Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 SUPERFAMILY SSF54631 310 354 8.78E-6 T 14-10-2018 Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 Gene3D G3DSA:3.40.50.300 38 277 3.8E-69 T 14-10-2018 Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 SMART SM00382 62 251 4.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 SUPERFAMILY SSF52540 53 280 2.31E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 Pfam PF00005 ABC transporter 55 201 5.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3956 d0eff1bc4c9185dfdadddc86a202de0f 363 Gene3D G3DSA:3.10.580.10 302 363 5.5E-5 T 14-10-2018 Atu2715 812d29e67edfb28dcdf8f4991e0d1fde 130 Gene3D G3DSA:3.10.180.10 1 130 2.6E-55 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2715 812d29e67edfb28dcdf8f4991e0d1fde 130 SUPERFAMILY SSF54593 1 128 1.34E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4052 43c44a4f4aaa6eba9acf0c4281677bcd 314 Pfam PF00535 Glycosyl transferase family 2 17 174 1.0E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4052 43c44a4f4aaa6eba9acf0c4281677bcd 314 Gene3D G3DSA:3.90.550.10 4 226 6.9E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4052 43c44a4f4aaa6eba9acf0c4281677bcd 314 SUPERFAMILY SSF53448 9 251 8.72E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4816 b1c432badc94c7eb9468335b9c64e0a5 427 Pfam PF13692 Glycosyl transferases group 1 241 369 1.1E-18 T 14-10-2018 Atu4816 b1c432badc94c7eb9468335b9c64e0a5 427 SUPERFAMILY SSF53756 177 402 3.14E-46 T 14-10-2018 Atu4816 b1c432badc94c7eb9468335b9c64e0a5 427 Gene3D G3DSA:3.40.50.2000 224 386 4.2E-36 T 14-10-2018 Atu4816 b1c432badc94c7eb9468335b9c64e0a5 427 Gene3D G3DSA:3.40.50.2000 177 401 4.2E-36 T 14-10-2018 Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 2.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 SUPERFAMILY SSF51735 3 241 3.0E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 Gene3D G3DSA:3.40.50.720 2 249 1.2E-60 T 14-10-2018 Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 4.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 4.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 4.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 4.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4574 93d7edc54a4704b7b6f2f1b95e898029 249 Pfam PF00106 short chain dehydrogenase 3 178 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0086 5c624b0ce143274100a401a3d29db291 138 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 102 6.0E-46 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atu0086 5c624b0ce143274100a401a3d29db291 138 Pfam PF02033 Ribosome-binding factor A 12 118 3.2E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atu0086 5c624b0ce143274100a401a3d29db291 138 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 120 1.1E-14 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atu0086 5c624b0ce143274100a401a3d29db291 138 ProSitePatterns PS01319 Ribosome-binding factor A signature. 83 105 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Atu0086 5c624b0ce143274100a401a3d29db291 138 Gene3D G3DSA:3.30.300.20 7 113 3.7E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu0086 5c624b0ce143274100a401a3d29db291 138 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 11 118 25.334 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Atu0086 5c624b0ce143274100a401a3d29db291 138 SUPERFAMILY SSF89919 8 120 1.16E-28 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 Gene3D G3DSA:3.40.190.10 103 285 5.6E-64 T 14-10-2018 Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.7E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 Pfam PF03466 LysR substrate binding domain 90 288 1.4E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 Gene3D G3DSA:3.40.190.10 163 259 5.6E-64 T 14-10-2018 Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 SUPERFAMILY SSF46785 3 87 1.95E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 Gene3D G3DSA:1.10.10.10 6 95 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3078 8e0e902f03d4cb1318f673fd2c4932bf 292 SUPERFAMILY SSF53850 83 289 2.02E-37 T 14-10-2018 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 Gene3D G3DSA:3.40.50.2000 3 470 5.2E-169 T 14-10-2018 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 Pfam PF08323 Starch synthase catalytic domain 2 232 5.6E-70 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 Hamap MF_00484 Glycogen synthase [glgA]. 1 472 43.639 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 SUPERFAMILY SSF53756 1 473 2.23E-117 T 14-10-2018 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 472 4.0E-175 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 Gene3D G3DSA:3.40.50.2000 246 456 5.2E-169 T 14-10-2018 Atu5285 2510d1ffb8db2f16c361d32ab1037365 509 Pfam PF00534 Glycosyl transferases group 1 285 444 3.2E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu4723 249a3292836a95d415d9757eea0b1a24 603 SMART SM00382 338 530 8.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4723 249a3292836a95d415d9757eea0b1a24 603 SMART SM00382 35 234 5.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4723 249a3292836a95d415d9757eea0b1a24 603 Pfam PF00005 ABC transporter 330 479 6.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4723 249a3292836a95d415d9757eea0b1a24 603 Pfam PF00005 ABC transporter 27 184 9.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4723 249a3292836a95d415d9757eea0b1a24 603 SUPERFAMILY SSF52540 303 552 9.58E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4723 249a3292836a95d415d9757eea0b1a24 603 SUPERFAMILY SSF52540 6 256 6.71E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4723 249a3292836a95d415d9757eea0b1a24 603 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4723 249a3292836a95d415d9757eea0b1a24 603 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 268 3.2E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4723 249a3292836a95d415d9757eea0b1a24 603 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 532 564 6.4E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4723 249a3292836a95d415d9757eea0b1a24 603 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4723 249a3292836a95d415d9757eea0b1a24 603 Gene3D G3DSA:3.40.50.300 4 294 6.3E-85 T 14-10-2018 Atu4723 249a3292836a95d415d9757eea0b1a24 603 Gene3D G3DSA:3.40.50.300 300 596 1.7E-84 T 14-10-2018 Atu4302 0d67775aa07022160094e57ab01031f3 137 SUPERFAMILY SSF51182 41 135 3.89E-17 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4302 0d67775aa07022160094e57ab01031f3 137 Gene3D G3DSA:2.60.120.10 15 136 2.2E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4302 0d67775aa07022160094e57ab01031f3 137 Pfam PF07883 Cupin domain 50 123 4.4E-13 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu2662 8cf48ff3c2fd0747afb3012f23403d9c 168 SUPERFAMILY SSF55729 6 163 3.71E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2662 8cf48ff3c2fd0747afb3012f23403d9c 168 Pfam PF00583 Acetyltransferase (GNAT) family 49 144 7.9E-12 T 14-10-2018 IPR000182 GNAT domain Atu2662 8cf48ff3c2fd0747afb3012f23403d9c 168 Gene3D G3DSA:3.40.630.30 7 168 5.6E-33 T 14-10-2018 Atu3364 81967579f3bfb386d9e3256285bf9999 417 Pfam PF01266 FAD dependent oxidoreductase 8 398 3.3E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3364 81967579f3bfb386d9e3256285bf9999 417 Gene3D G3DSA:3.50.50.60 125 398 3.6E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3364 81967579f3bfb386d9e3256285bf9999 417 Gene3D G3DSA:3.30.9.10 139 358 3.6E-43 T 14-10-2018 Atu3364 81967579f3bfb386d9e3256285bf9999 417 SUPERFAMILY SSF54373 274 359 4.45E-12 T 14-10-2018 Atu3364 81967579f3bfb386d9e3256285bf9999 417 SUPERFAMILY SSF51905 6 416 2.91E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3364 81967579f3bfb386d9e3256285bf9999 417 Gene3D G3DSA:3.50.50.60 3 70 1.2E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1561 64f787be2c3501e21f5c9dc010700b8d 130 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 19 126 1.1E-30 T 14-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein Atu1561 64f787be2c3501e21f5c9dc010700b8d 130 SUPERFAMILY SSF64076 5 128 7.98E-42 T 14-10-2018 IPR036748 MTH938-like superfamily Atu1561 64f787be2c3501e21f5c9dc010700b8d 130 Gene3D G3DSA:3.40.1230.10 12 129 8.0E-39 T 14-10-2018 IPR036748 MTH938-like superfamily Atu2615 2c30d256545eef1b1daddde18a855d75 641 Pfam PF01103 Surface antigen 341 641 3.5E-60 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Atu2615 2c30d256545eef1b1daddde18a855d75 641 Gene3D G3DSA:3.10.20.310 225 317 3.5E-12 T 14-10-2018 Atu2615 2c30d256545eef1b1daddde18a855d75 641 Pfam PF07244 Surface antigen variable number repeat 243 314 1.0E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Atu2615 2c30d256545eef1b1daddde18a855d75 641 Gene3D G3DSA:2.40.160.50 318 641 4.5E-70 T 14-10-2018 Atu4528 c5ac2fec384fd5a44f6084711a3655b9 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 22 85 2.6E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu4528 c5ac2fec384fd5a44f6084711a3655b9 100 SUPERFAMILY SSF54909 16 89 1.77E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4528 c5ac2fec384fd5a44f6084711a3655b9 100 Gene3D G3DSA:3.30.70.100 11 99 7.1E-12 T 14-10-2018 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 Gene3D G3DSA:3.50.50.60 3 337 2.7E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 Gene3D G3DSA:3.30.9.50 75 268 2.7E-93 T 14-10-2018 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 Pfam PF01494 FAD binding domain 2 313 2.2E-27 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 SUPERFAMILY SSF51905 2 383 6.95E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 389 3.2E-119 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 5.5E-17 T 14-10-2018 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 5.5E-17 T 14-10-2018 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 5.5E-17 T 14-10-2018 Atu2755 19511d264b928c8e5c3d3116d2c4556f 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 5.5E-17 T 14-10-2018 Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 Gene3D G3DSA:3.40.640.10 83 437 2.3E-53 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 SMART SM00345 22 81 2.9E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 4.3E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 SUPERFAMILY SSF46785 18 85 1.5E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 Pfam PF00155 Aminotransferase class I and II 91 425 5.2E-18 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 SUPERFAMILY SSF53383 75 446 1.99E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4266 5b3375538891cc9a1f67e28d796fa5b0 448 Gene3D G3DSA:1.10.10.10 13 82 2.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 28 305 1.4E-56 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 SMART SM00062 27 236 2.5E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 Pfam PF13379 NMT1-like family 41 248 9.0E-17 T 14-10-2018 Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 Gene3D G3DSA:3.40.190.10 28 295 3.8E-75 T 14-10-2018 Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 Gene3D G3DSA:3.40.190.10 102 200 3.8E-75 T 14-10-2018 Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 SUPERFAMILY SSF53850 41 241 8.35E-42 T 14-10-2018 Atu6085 7df2375acca7b05fcdb606b0c08e2ccc 310 Gene3D G3DSA:1.10.8.450 231 263 3.8E-75 T 14-10-2018 Atu1367 6d99209c118b13536eab589341cd4440 288 SUPERFAMILY SSF53850 93 284 6.83E-25 T 14-10-2018 Atu1367 6d99209c118b13536eab589341cd4440 288 Pfam PF03466 LysR substrate binding domain 88 282 4.4E-21 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1367 6d99209c118b13536eab589341cd4440 288 Gene3D G3DSA:3.40.190.10 101 278 1.1E-34 T 14-10-2018 Atu1367 6d99209c118b13536eab589341cd4440 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1367 6d99209c118b13536eab589341cd4440 288 SUPERFAMILY SSF46785 3 83 3.72E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1367 6d99209c118b13536eab589341cd4440 288 Gene3D G3DSA:1.10.10.10 5 93 2.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1367 6d99209c118b13536eab589341cd4440 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1367 6d99209c118b13536eab589341cd4440 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1367 6d99209c118b13536eab589341cd4440 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1367 6d99209c118b13536eab589341cd4440 288 Gene3D G3DSA:3.40.190.10 156 253 1.1E-34 T 14-10-2018 Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 SUPERFAMILY SSF48498 87 192 4.84E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 SUPERFAMILY SSF46689 14 70 8.98E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 6.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 6.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 Gene3D G3DSA:1.10.357.10 65 217 3.6E-49 T 14-10-2018 Atu2020 839afd2ad456af57b38b0edb9cfa07b5 217 Gene3D G3DSA:1.10.10.60 1 63 3.2E-31 T 14-10-2018 Atu1902 42254e84b2c73889731eb05976d30bce 309 Gene3D G3DSA:3.40.50.970 2 177 5.5E-53 T 14-10-2018 Atu1902 42254e84b2c73889731eb05976d30bce 309 Pfam PF02779 Transketolase, pyrimidine binding domain 3 162 2.6E-30 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu1902 42254e84b2c73889731eb05976d30bce 309 SUPERFAMILY SSF52518 3 167 7.85E-50 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu1902 42254e84b2c73889731eb05976d30bce 309 SMART SM00861 2 167 1.1E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu1902 42254e84b2c73889731eb05976d30bce 309 SUPERFAMILY SSF52922 174 306 9.68E-34 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu1902 42254e84b2c73889731eb05976d30bce 309 Pfam PF02780 Transketolase, C-terminal domain 178 298 8.2E-29 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Atu1902 42254e84b2c73889731eb05976d30bce 309 Gene3D G3DSA:3.40.50.920 178 309 5.8E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu1274 2872510b1ece965e5d9d5a89f86d3dd1 369 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 172 1.0E-52 T 14-10-2018 Atu1274 2872510b1ece965e5d9d5a89f86d3dd1 369 SUPERFAMILY SSF52833 18 176 1.68E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1274 2872510b1ece965e5d9d5a89f86d3dd1 369 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 173 2.0E-57 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1274 2872510b1ece965e5d9d5a89f86d3dd1 369 Gene3D G3DSA:1.10.10.1590 16 89 9.6E-29 T 14-10-2018 Atu1274 2872510b1ece965e5d9d5a89f86d3dd1 369 Gene3D G3DSA:3.40.30.10 93 191 7.2E-24 T 14-10-2018 Atu0593 5534536d05c700922a528435eeae4662 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 188 378 9.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0593 5534536d05c700922a528435eeae4662 386 Gene3D G3DSA:1.10.3720.10 133 372 5.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu0593 5534536d05c700922a528435eeae4662 386 SUPERFAMILY SSF161098 12 385 2.21E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu1196 1322e27721d7ac7419dbecdf3c281344 335 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 82 2.2E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 SUPERFAMILY SSF54292 5 90 8.78E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 Pfam PF00175 Oxidoreductase NAD-binding domain 211 311 2.8E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 Gene3D G3DSA:2.40.30.10 98 198 1.5E-21 T 14-10-2018 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 144 3.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 228 3.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 3.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 150 157 3.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 Pfam PF00970 Oxidoreductase FAD-binding domain 108 197 6.1E-11 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 SUPERFAMILY SSF52343 202 331 2.36E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu1196 1322e27721d7ac7419dbecdf3c281344 335 Gene3D G3DSA:3.40.50.80 202 331 4.2E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu1196 1322e27721d7ac7419dbecdf3c281344 335 Gene3D G3DSA:3.10.20.30 5 91 8.7E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu1196 1322e27721d7ac7419dbecdf3c281344 335 SUPERFAMILY SSF63380 105 199 7.58E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00410 Phenol hydroxylase reductase family signature 150 157 6.3E-22 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 6.3E-22 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 6.3E-22 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 146 6.3E-22 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 6.3E-22 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu1196 1322e27721d7ac7419dbecdf3c281344 335 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 6.3E-22 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Atu6061 5ed63d1b8c5092cda791593eab61483c 415 Pfam PF00296 Luciferase-like monooxygenase 22 351 2.9E-44 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu6061 5ed63d1b8c5092cda791593eab61483c 415 PIRSF PIRSF000337 169 414 7.5E-79 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu6061 5ed63d1b8c5092cda791593eab61483c 415 PIRSF PIRSF000337 3 172 2.6E-57 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu6061 5ed63d1b8c5092cda791593eab61483c 415 Gene3D G3DSA:3.20.20.30 1 412 1.5E-105 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu6061 5ed63d1b8c5092cda791593eab61483c 415 SUPERFAMILY SSF51679 4 404 1.83E-95 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Gene3D G3DSA:2.40.50.100 213 247 1.5E-15 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Pfam PF13437 HlyD family secretion protein 212 318 6.1E-14 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 SUPERFAMILY SSF111369 185 291 1.2E-7 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Gene3D G3DSA:2.40.50.100 46 79 3.2E-12 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Gene3D G3DSA:1.10.287.470 182 212 1.5E-15 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Gene3D G3DSA:1.10.287.470 113 176 4.6E-8 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Gene3D G3DSA:1.10.287.470 80 109 3.2E-12 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Pfam PF13533 Biotin-lipoyl like 47 93 3.9E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 Gene3D G3DSA:2.40.30.170 248 316 1.5E-15 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 326 341 3.6E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 57 77 3.6E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 SUPERFAMILY SSF111369 39 111 2.35E-10 T 14-10-2018 Atu4666 25ea67a91d8cb01ea8ab76f5dc3b028d 354 SUPERFAMILY SSF111369 118 174 1.83E-6 T 14-10-2018 Atu0031 9ce55c30ae903b352a4c9c1d932b1a63 133 Gene3D G3DSA:3.40.50.510 1 131 2.9E-40 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Atu0031 9ce55c30ae903b352a4c9c1d932b1a63 133 Pfam PF03610 PTS system fructose IIA component 3 113 5.7E-30 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Atu0031 9ce55c30ae903b352a4c9c1d932b1a63 133 SUPERFAMILY SSF53062 1 129 5.23E-38 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Atu2640 575efda30104426dbc6f54732363472d 387 Gene3D G3DSA:3.40.50.300 38 230 2.2E-18 T 14-10-2018 Atu2640 575efda30104426dbc6f54732363472d 387 SUPERFAMILY SSF52540 69 216 5.42E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2640 575efda30104426dbc6f54732363472d 387 Pfam PF03969 AFG1-like ATPase 11 378 1.7E-129 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 69 127 3.8E-5 T 14-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 Pfam PF00361 Proton-conducting membrane transporter 134 420 1.4E-89 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 6.7E-50 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 6.7E-50 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 6.7E-50 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 6.7E-50 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 6.7E-50 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1282 8053d18f499daca2a0b82f1691693fc6 503 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 486 1.5E-185 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 Pfam PF03466 LysR substrate binding domain 90 290 3.2E-40 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 SUPERFAMILY SSF46785 4 85 1.36E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 Gene3D G3DSA:3.40.190.10 91 289 6.3E-57 T 14-10-2018 Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 Gene3D G3DSA:1.10.10.10 3 89 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 Gene3D G3DSA:3.40.190.10 161 263 6.3E-57 T 14-10-2018 Atu4271 af03642679aac796d05bf92cb6e0d7ed 295 SUPERFAMILY SSF53850 90 291 3.08E-43 T 14-10-2018 Atu1448 c7c72cad28c97507dd712e8687119030 454 SUPERFAMILY SSF46689 352 454 6.27E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1448 c7c72cad28c97507dd712e8687119030 454 SMART SM00448 3 116 2.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1448 c7c72cad28c97507dd712e8687119030 454 Gene3D G3DSA:1.10.10.60 401 454 1.4E-13 T 14-10-2018 Atu1448 c7c72cad28c97507dd712e8687119030 454 SUPERFAMILY SSF52540 142 371 1.32E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1448 c7c72cad28c97507dd712e8687119030 454 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 2.4E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1448 c7c72cad28c97507dd712e8687119030 454 Gene3D G3DSA:3.40.50.300 140 310 2.5E-48 T 14-10-2018 Atu1448 c7c72cad28c97507dd712e8687119030 454 Gene3D G3DSA:3.40.50.2300 2 139 1.1E-35 T 14-10-2018 Atu1448 c7c72cad28c97507dd712e8687119030 454 SUPERFAMILY SSF52172 4 186 3.98E-40 T 14-10-2018 IPR011006 CheY-like superfamily Atu1448 c7c72cad28c97507dd712e8687119030 454 Gene3D G3DSA:1.10.8.60 311 387 1.9E-20 T 14-10-2018 Atu1448 c7c72cad28c97507dd712e8687119030 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 435 2.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1448 c7c72cad28c97507dd712e8687119030 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 454 2.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu1448 c7c72cad28c97507dd712e8687119030 454 Pfam PF00158 Sigma-54 interaction domain 142 305 3.5E-48 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atu1448 c7c72cad28c97507dd712e8687119030 454 Pfam PF00072 Response regulator receiver domain 5 114 3.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1448 c7c72cad28c97507dd712e8687119030 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atu1448 c7c72cad28c97507dd712e8687119030 454 SMART SM00382 162 302 4.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 Pfam PF02817 e3 binding domain 118 149 1.9E-7 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 181 407 1.4E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 SUPERFAMILY SSF51230 1 96 5.37E-28 T 14-10-2018 IPR011053 Single hybrid motif Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 409 6.8E-171 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 Gene3D G3DSA:2.40.50.100 1 101 4.8E-25 T 14-10-2018 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 Gene3D G3DSA:4.10.320.10 117 155 1.0E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 Pfam PF00364 Biotin-requiring enzyme 4 76 1.3E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 Gene3D G3DSA:3.30.559.10 179 410 2.1E-93 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 SUPERFAMILY SSF52777 180 409 7.56E-89 T 14-10-2018 Atu2635 f24bf146a15a162a16f7c6ab0607ce60 410 SUPERFAMILY SSF47005 108 154 1.96E-8 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atu3701 ddfa706c7d2cec0f994e890f31cca89f 230 Gene3D G3DSA:3.40.30.10 16 101 7.7E-36 T 14-10-2018 Atu3701 ddfa706c7d2cec0f994e890f31cca89f 230 Pfam PF13410 Glutathione S-transferase, C-terminal domain 143 206 3.2E-6 T 14-10-2018 Atu3701 ddfa706c7d2cec0f994e890f31cca89f 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 30 95 8.2E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu3701 ddfa706c7d2cec0f994e890f31cca89f 230 SUPERFAMILY SSF47616 97 219 3.9E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu3701 ddfa706c7d2cec0f994e890f31cca89f 230 SUPERFAMILY SSF52833 36 96 1.78E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3701 ddfa706c7d2cec0f994e890f31cca89f 230 Gene3D G3DSA:1.20.1050.10 102 218 7.1E-47 T 14-10-2018 Atu6087 eaafa54a6e4d8671100ae835f4c3b1d9 259 SMART SM00382 41 215 8.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6087 eaafa54a6e4d8671100ae835f4c3b1d9 259 Gene3D G3DSA:3.40.50.300 10 237 3.2E-66 T 14-10-2018 Atu6087 eaafa54a6e4d8671100ae835f4c3b1d9 259 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6087 eaafa54a6e4d8671100ae835f4c3b1d9 259 Pfam PF00005 ABC transporter 32 165 3.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6087 eaafa54a6e4d8671100ae835f4c3b1d9 259 SUPERFAMILY SSF52540 18 219 8.74E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4875 0f64a2f2d2ebdfc4ee0b3256f515d3da 133 SUPERFAMILY SSF54427 1 128 8.07E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu4875 0f64a2f2d2ebdfc4ee0b3256f515d3da 133 Pfam PF12680 SnoaL-like domain 11 114 1.0E-11 T 14-10-2018 IPR037401 SnoaL-like domain Atu4875 0f64a2f2d2ebdfc4ee0b3256f515d3da 133 Gene3D G3DSA:3.10.450.50 1 122 3.9E-26 T 14-10-2018 Atu0619 012093948ef27dd1348499f79cee4054 566 SUPERFAMILY SSF53067 226 348 2.12E-35 T 14-10-2018 Atu0619 012093948ef27dd1348499f79cee4054 566 Pfam PF02541 Ppx/GppA phosphatase family 247 541 9.6E-45 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Atu0619 012093948ef27dd1348499f79cee4054 566 Gene3D G3DSA:3.30.420.40 210 348 6.6E-43 T 14-10-2018 Atu0619 012093948ef27dd1348499f79cee4054 566 SUPERFAMILY SSF53067 353 542 1.89E-38 T 14-10-2018 Atu0619 012093948ef27dd1348499f79cee4054 566 Gene3D G3DSA:3.30.420.150 350 543 2.3E-52 T 14-10-2018 Atu6025 836672e7622fa7f28ccc4f9fbc1daeb8 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 215 5.3E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6025 836672e7622fa7f28ccc4f9fbc1daeb8 241 Gene3D G3DSA:1.10.3720.10 1 223 9.6E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu6025 836672e7622fa7f28ccc4f9fbc1daeb8 241 SUPERFAMILY SSF161098 12 208 2.62E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu6025 836672e7622fa7f28ccc4f9fbc1daeb8 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 117 7.3E-23 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 Gene3D G3DSA:3.20.20.70 1 321 2.1E-136 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 PIRSF PIRSF001365 1 313 1.3E-66 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 Pfam PF00701 Dihydrodipicolinate synthetase family 6 242 4.0E-31 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 SUPERFAMILY SSF51569 2 273 9.73E-52 T 14-10-2018 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.3E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 1.3E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.3E-7 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4675 4b7eda64cc50b6062fa8df747cffa2bb 321 SMART SM01130 5 302 1.2E-47 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu2656 81f467440707ef46d508b316f2adfde9 538 Gene3D G3DSA:1.25.40.10 71 399 3.9E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2656 81f467440707ef46d508b316f2adfde9 538 Pfam PF07219 HemY protein N-terminus 26 131 3.6E-25 T 14-10-2018 IPR010817 HemY, N-terminal Atu2656 81f467440707ef46d508b316f2adfde9 538 PIRSF PIRSF031802 1 538 3.9E-199 T 14-10-2018 IPR016982 Uncharacterised conserved protein UCP031802 Atu2656 81f467440707ef46d508b316f2adfde9 538 SUPERFAMILY SSF48452 246 361 1.02E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 SUPERFAMILY SSF46785 7 64 1.01E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 Pfam PF00455 DeoR C terminal sensor domain 78 237 1.3E-48 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 SUPERFAMILY SSF100950 77 239 4.47E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 Gene3D G3DSA:1.10.10.10 6 89 5.7E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 3.3E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 3.3E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 SMART SM01134 76 238 6.4E-56 T 14-10-2018 Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 Pfam PF08220 DeoR-like helix-turn-helix domain 9 64 5.2E-21 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu6138 dd809365ae3e6a8c2265c9c704d4b972 258 SMART SM00420 9 61 3.3E-23 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu5006 e81f057524d4ac93f98208266938dc53 277 SMART SM00079 46 266 0.0047 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Atu5006 e81f057524d4ac93f98208266938dc53 277 Gene3D G3DSA:3.40.190.10 135 225 4.3E-84 T 14-10-2018 Atu5006 e81f057524d4ac93f98208266938dc53 277 SMART SM00062 46 266 2.7E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu5006 e81f057524d4ac93f98208266938dc53 277 Gene3D G3DSA:3.40.190.10 47 264 4.3E-84 T 14-10-2018 Atu5006 e81f057524d4ac93f98208266938dc53 277 SUPERFAMILY SSF53850 19 266 1.14E-55 T 14-10-2018 Atu5006 e81f057524d4ac93f98208266938dc53 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 265 1.5E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4019 4f1a551d14594c0035e6033fcff17152 217 SMART SM00862 145 216 9.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4019 4f1a551d14594c0035e6033fcff17152 217 Gene3D G3DSA:1.10.10.10 123 217 4.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4019 4f1a551d14594c0035e6033fcff17152 217 SUPERFAMILY SSF52172 1 169 4.84E-34 T 14-10-2018 IPR011006 CheY-like superfamily Atu4019 4f1a551d14594c0035e6033fcff17152 217 Pfam PF00072 Response regulator receiver domain 3 111 6.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4019 4f1a551d14594c0035e6033fcff17152 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 2.0E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4019 4f1a551d14594c0035e6033fcff17152 217 SMART SM00448 1 112 6.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4019 4f1a551d14594c0035e6033fcff17152 217 Gene3D G3DSA:3.40.50.2300 1 121 4.1E-35 T 14-10-2018 Atu5193 c3aaf903a72eb1dc11328acf56ee83b9 633 SUPERFAMILY SSF82171 21 349 2.2E-14 T 14-10-2018 Atu5193 c3aaf903a72eb1dc11328acf56ee83b9 633 Pfam PF00326 Prolyl oligopeptidase family 420 631 1.3E-41 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Atu5193 c3aaf903a72eb1dc11328acf56ee83b9 633 Gene3D G3DSA:3.40.50.1820 340 633 1.7E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5193 c3aaf903a72eb1dc11328acf56ee83b9 633 Gene3D G3DSA:2.120.10.30 9 268 2.1E-14 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu5193 c3aaf903a72eb1dc11328acf56ee83b9 633 SUPERFAMILY SSF53474 368 631 5.96E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3765 63093d5665d4098d732bb32118ca66a7 616 Pfam PF01432 Peptidase family M3 218 598 1.5E-39 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Atu3765 63093d5665d4098d732bb32118ca66a7 616 Gene3D G3DSA:1.20.140.70 40 195 1.0E-15 T 14-10-2018 Atu3765 63093d5665d4098d732bb32118ca66a7 616 Gene3D G3DSA:1.10.1370.20 244 615 3.7E-119 T 14-10-2018 Atu3765 63093d5665d4098d732bb32118ca66a7 616 SUPERFAMILY SSF55486 25 595 2.81E-114 T 14-10-2018 Atu3765 63093d5665d4098d732bb32118ca66a7 616 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 28 611 2.4E-223 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 Atu3765 63093d5665d4098d732bb32118ca66a7 616 Pfam PF08439 Oligopeptidase F 134 203 6.0E-18 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 246 259 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 Gene3D G3DSA:3.40.50.261 130 298 1.4E-67 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 SMART SM00881 4 106 6.1E-32 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 187 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 SUPERFAMILY SSF51735 1 128 1.62E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 Pfam PF00549 CoA-ligase 157 280 1.4E-17 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 PIRSF PIRSF001553 1 300 2.3E-120 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 SUPERFAMILY SSF52210 129 298 9.29E-50 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 PRINTS PR01798 Succinyl-CoA synthase signature 214 227 2.7E-37 T 14-10-2018 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 PRINTS PR01798 Succinyl-CoA synthase signature 183 201 2.7E-37 T 14-10-2018 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 PRINTS PR01798 Succinyl-CoA synthase signature 88 105 2.7E-37 T 14-10-2018 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 PRINTS PR01798 Succinyl-CoA synthase signature 250 267 2.7E-37 T 14-10-2018 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 298 4.3E-127 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 298 41.426 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 Gene3D G3DSA:3.40.50.720 2 129 1.9E-47 T 14-10-2018 Atu2637 1b774ec9878e7abefcf87f254e2df9e2 300 Pfam PF02629 CoA binding domain 6 105 1.3E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Atu1043 1b41b5569e635a2f31c11e1615686857 214 SMART SM00471 26 143 4.0E-4 T 14-10-2018 IPR003607 HD/PDEase domain Atu1043 1b41b5569e635a2f31c11e1615686857 214 Gene3D G3DSA:1.10.3210.50 10 214 2.1E-65 T 14-10-2018 Atu1043 1b41b5569e635a2f31c11e1615686857 214 Pfam PF01966 HD domain 32 133 2.1E-9 T 14-10-2018 IPR006674 HD domain Atu1043 1b41b5569e635a2f31c11e1615686857 214 SUPERFAMILY SSF109604 15 214 1.41E-56 T 14-10-2018 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 Pfam PF00072 Response regulator receiver domain 8 119 1.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 SUPERFAMILY SSF46894 138 240 2.83E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 Gene3D G3DSA:3.40.50.2300 2 133 3.6E-29 T 14-10-2018 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 167 239 3.5E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 SUPERFAMILY SSF52172 5 133 1.57E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 SMART SM00448 6 118 1.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 SMART SM00862 163 239 4.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu4782 c8a910c4b469ce2ffe843f67fde1f6cb 248 Gene3D G3DSA:1.10.10.10 134 245 6.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0908 42336a7a0f3704f14a8d47508985a135 135 Pfam PF01641 SelR domain 15 134 7.0E-55 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Atu0908 42336a7a0f3704f14a8d47508985a135 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 12 135 39.408 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Atu0908 42336a7a0f3704f14a8d47508985a135 135 Gene3D G3DSA:2.170.150.20 2 135 3.9E-62 T 14-10-2018 Atu0908 42336a7a0f3704f14a8d47508985a135 135 SUPERFAMILY SSF51316 10 134 3.77E-61 T 14-10-2018 IPR011057 Mss4-like superfamily Atu0908 42336a7a0f3704f14a8d47508985a135 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 11 134 2.1E-54 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Atu1932 66af87851f784c5ac2d3b2fa4c8e6dfb 132 Pfam PF00410 Ribosomal protein S8 5 132 6.9E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1932 66af87851f784c5ac2d3b2fa4c8e6dfb 132 SUPERFAMILY SSF56047 3 132 3.27E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1932 66af87851f784c5ac2d3b2fa4c8e6dfb 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1932 66af87851f784c5ac2d3b2fa4c8e6dfb 132 Gene3D G3DSA:3.30.1490.10 75 131 9.4E-27 T 14-10-2018 Atu1932 66af87851f784c5ac2d3b2fa4c8e6dfb 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.714 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1932 66af87851f784c5ac2d3b2fa4c8e6dfb 132 Gene3D G3DSA:3.30.1370.30 2 74 1.6E-22 T 14-10-2018 Atu2537 bffed6e6ec3efc5adcfe3803177c51d4 206 Gene3D G3DSA:1.10.357.10 8 182 3.4E-12 T 14-10-2018 Atu2537 bffed6e6ec3efc5adcfe3803177c51d4 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 8.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2537 bffed6e6ec3efc5adcfe3803177c51d4 206 SUPERFAMILY SSF46689 11 69 1.59E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 SUPERFAMILY SSF141868 529 764 1.7E-86 T 14-10-2018 IPR035919 EAL domain superfamily Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 SMART SM00052 524 766 1.0E-106 T 14-10-2018 IPR001633 EAL domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Gene3D G3DSA:3.20.20.450 528 778 8.9E-94 T 14-10-2018 IPR035919 EAL domain superfamily Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Gene3D G3DSA:3.30.70.270 349 527 7.8E-54 T 14-10-2018 Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 510 2.3E-42 T 14-10-2018 IPR000160 GGDEF domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 508 1.4E-45 T 14-10-2018 IPR000160 GGDEF domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 SUPERFAMILY SSF55785 258 351 1.39E-7 T 14-10-2018 IPR035965 PAS domain superfamily Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Gene3D G3DSA:3.30.450.20 240 348 1.5E-7 T 14-10-2018 Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Pfam PF00563 EAL domain 531 761 2.1E-71 T 14-10-2018 IPR001633 EAL domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 SMART SM00267 343 514 1.5E-56 T 14-10-2018 IPR000160 GGDEF domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 SUPERFAMILY SSF55073 359 516 3.06E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 255 349 1.3E-6 T 14-10-2018 IPR000014 PAS domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 103 1.0E-9 T 14-10-2018 IPR005330 MHYT domain Atu4628 c8193ff814fe0f71c414a2d8a25d990e 779 Pfam PF03707 Bacterial signalling protein N terminal repeat 119 173 6.9E-7 T 14-10-2018 IPR005330 MHYT domain Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 SMART SM01012 133 188 2.4E-25 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 Gene3D G3DSA:1.10.10.10 135 193 2.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 SUPERFAMILY SSF52172 3 188 6.55E-51 T 14-10-2018 IPR011006 CheY-like superfamily Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 Pfam PF00072 Response regulator receiver domain 8 111 9.6E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 Gene3D G3DSA:3.40.50.2300 3 129 8.0E-14 T 14-10-2018 Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 Pfam PF03861 ANTAR domain 136 188 5.7E-21 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 PIRSF PIRSF036382 1 195 1.2E-71 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Atu3907 4a8c7b27c2e4c2fc986c08eb2bd16f29 195 SMART SM00448 6 117 0.0033 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu6144 cf91c3ccceff4a82602f81ecf2a01a97 266 Gene3D G3DSA:3.20.20.190 11 254 3.2E-54 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu6144 cf91c3ccceff4a82602f81ecf2a01a97 266 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 16 223 3.3E-30 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Atu6144 cf91c3ccceff4a82602f81ecf2a01a97 266 SUPERFAMILY SSF51695 13 260 2.49E-53 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu2360 f9040a1a794fd9b721773f01b107015d 649 Pfam PF00672 HAMP domain 214 260 1.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2360 f9040a1a794fd9b721773f01b107015d 649 Gene3D G3DSA:1.10.287.950 293 595 3.0E-75 T 14-10-2018 Atu2360 f9040a1a794fd9b721773f01b107015d 649 SUPERFAMILY SSF58104 313 594 2.35E-66 T 14-10-2018 Atu2360 f9040a1a794fd9b721773f01b107015d 649 SUPERFAMILY SSF158472 214 262 1.02E-7 T 14-10-2018 Atu2360 f9040a1a794fd9b721773f01b107015d 649 SMART SM00283 346 593 3.7E-98 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2360 f9040a1a794fd9b721773f01b107015d 649 SMART SM00304 293 345 68.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2360 f9040a1a794fd9b721773f01b107015d 649 SMART SM00304 212 265 4.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2360 f9040a1a794fd9b721773f01b107015d 649 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 560 5.5E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2360 f9040a1a794fd9b721773f01b107015d 649 Gene3D G3DSA:1.20.1480.50 172 271 4.5E-14 T 14-10-2018 Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 9.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 SUPERFAMILY SSF46894 126 220 4.82E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 SMART SM00862 145 220 2.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 SUPERFAMILY SSF52172 1 118 8.11E-33 T 14-10-2018 IPR011006 CheY-like superfamily Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 Gene3D G3DSA:1.10.10.10 122 224 5.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 Gene3D G3DSA:3.40.50.2300 1 121 7.0E-32 T 14-10-2018 Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 Pfam PF00072 Response regulator receiver domain 4 113 3.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3781 fac6d9fb8d09846cfc4e6af8ceab7e2e 224 SMART SM00448 1 112 1.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2058 4c3489894bb8dd69f217629fc49b2e7b 206 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 68 1.8E-12 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 259 8.6E-58 T 14-10-2018 Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 Gene3D G3DSA:3.40.50.720 3 261 1.5E-79 T 14-10-2018 Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 261 2.4E-118 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 SUPERFAMILY SSF51735 5 260 1.0E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4131 3fcded9669c50c56b0bc6e35ff6640f2 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5182 97605602b2314f9dd3e653ff053a99b3 311 Pfam PF00107 Zinc-binding dehydrogenase 145 238 4.6E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu5182 97605602b2314f9dd3e653ff053a99b3 311 Gene3D G3DSA:3.90.180.10 6 305 2.8E-73 T 14-10-2018 Atu5182 97605602b2314f9dd3e653ff053a99b3 311 SUPERFAMILY SSF50129 4 132 1.98E-30 T 14-10-2018 IPR011032 GroES-like superfamily Atu5182 97605602b2314f9dd3e653ff053a99b3 311 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 23 81 8.8E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu5182 97605602b2314f9dd3e653ff053a99b3 311 SUPERFAMILY SSF51735 105 276 4.52E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5182 97605602b2314f9dd3e653ff053a99b3 311 Gene3D G3DSA:3.40.50.720 116 256 2.8E-73 T 14-10-2018 Atu5182 97605602b2314f9dd3e653ff053a99b3 311 SMART SM00829 5 309 6.8E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu1692 58a39a0936d2d5b2b85f12997bea68bb 202 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 202 1.1E-80 T 14-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent Atu1692 58a39a0936d2d5b2b85f12997bea68bb 202 Gene3D G3DSA:2.30.110.10 20 147 6.2E-25 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu1692 58a39a0936d2d5b2b85f12997bea68bb 202 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 29 121 5.1E-16 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu1692 58a39a0936d2d5b2b85f12997bea68bb 202 SUPERFAMILY SSF50475 22 191 6.0E-27 T 14-10-2018 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Gene3D G3DSA:2.60.40.1840 451 554 1.3E-26 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Gene3D G3DSA:1.10.1740.60 202 286 4.6E-41 T 14-10-2018 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 558 881 1.7E-98 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Pfam PF01433 Peptidase family M1 domain 215 443 8.8E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Gene3D G3DSA:2.60.40.1730 16 201 1.4E-66 T 14-10-2018 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 SUPERFAMILY SSF55486 210 457 5.13E-74 T 14-10-2018 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Gene3D G3DSA:1.25.50.10 556 881 7.4E-95 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 SUPERFAMILY SSF63737 6 200 4.32E-43 T 14-10-2018 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 451 553 8.8E-26 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 8.1E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 8.1E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 8.1E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 8.1E-8 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 Gene3D G3DSA:1.10.390.10 287 450 8.5E-62 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Atu0984 f9939de2f08b23d5195f308b4f8d403c 882 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 879 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Gene3D G3DSA:3.30.460.10 193 326 6.1E-41 T 14-10-2018 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Gene3D G3DSA:3.30.70.260 664 743 4.4E-10 T 14-10-2018 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Gene3D G3DSA:3.10.20.30 385 455 6.4E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Pfam PF13291 ACT domain 664 741 2.4E-15 T 14-10-2018 IPR002912 ACT domain Atu1030 94c69bd78788b45e089ce0e1591ad592 744 SMART SM00954 236 346 1.3E-57 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 738 3.8E-194 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Gene3D G3DSA:1.10.3210.10 1 191 5.2E-77 T 14-10-2018 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 SMART SM00471 41 153 5.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain Atu1030 94c69bd78788b45e089ce0e1591ad592 744 SUPERFAMILY SSF109604 5 191 1.1E-69 T 14-10-2018 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Pfam PF13328 HD domain 26 175 1.2E-48 T 14-10-2018 IPR003607 HD/PDEase domain Atu1030 94c69bd78788b45e089ce0e1591ad592 744 SUPERFAMILY SSF81301 181 396 6.7E-58 T 14-10-2018 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Pfam PF04607 Region found in RelA / SpoT proteins 236 346 8.4E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 Pfam PF02824 TGS domain 393 450 5.4E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 SUPERFAMILY SSF55021 671 740 1.91E-8 T 14-10-2018 Atu1030 94c69bd78788b45e089ce0e1591ad592 744 SUPERFAMILY SSF81271 379 451 5.23E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 5 238 1.0E-56 T 14-10-2018 Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 Gene3D G3DSA:3.40.50.720 1 239 7.8E-75 T 14-10-2018 Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.7E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.7E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.7E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 6.7E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 6.7E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 1.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.0E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3301 bb8728ffd43e54034a1d237fe7af8497 239 SUPERFAMILY SSF51735 2 239 3.72E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2135 03ae3f3113ac105181cbe915d0c29870 233 SUPERFAMILY SSF48498 119 231 4.45E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu2135 03ae3f3113ac105181cbe915d0c29870 233 SUPERFAMILY SSF46689 39 124 4.0E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2135 03ae3f3113ac105181cbe915d0c29870 233 Gene3D G3DSA:1.10.10.60 38 104 2.5E-23 T 14-10-2018 Atu2135 03ae3f3113ac105181cbe915d0c29870 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 97 4.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2135 03ae3f3113ac105181cbe915d0c29870 233 Gene3D G3DSA:1.10.357.10 105 233 1.2E-23 T 14-10-2018 Atu2135 03ae3f3113ac105181cbe915d0c29870 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 64 94 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 Gene3D G3DSA:3.40.640.10 6 257 2.7E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 389 7.1E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 9 390 52.921 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 8 389 3.3E-166 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 Gene3D G3DSA:3.90.1150.10 258 394 2.7E-45 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 SUPERFAMILY SSF53383 22 391 2.86E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu0432 185c2b08c1fd0e88252e31261bc8d1d9 394 PIRSF PIRSF001434 1 393 3.7E-125 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu6139 5d3139d593ba28fe279d20c09985f01a 521 SUPERFAMILY SSF53850 30 507 8.14E-101 T 14-10-2018 Atu6139 5d3139d593ba28fe279d20c09985f01a 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 426 2.1E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu6139 5d3139d593ba28fe279d20c09985f01a 521 Gene3D G3DSA:3.90.76.10 66 191 2.1E-187 T 14-10-2018 Atu6139 5d3139d593ba28fe279d20c09985f01a 521 Gene3D G3DSA:3.10.105.10 291 500 2.1E-187 T 14-10-2018 Atu6139 5d3139d593ba28fe279d20c09985f01a 521 Gene3D G3DSA:3.40.190.10 39 290 2.1E-187 T 14-10-2018 Atu6139 5d3139d593ba28fe279d20c09985f01a 521 PIRSF PIRSF002741 3 519 4.6E-77 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4492 fc2d761f73b8144fd3b2232dd4a92d2c 302 SMART SM00880 15 278 4.4E-23 T 14-10-2018 IPR007899 CHAD domain Atu4492 fc2d761f73b8144fd3b2232dd4a92d2c 302 Gene3D G3DSA:1.40.20.10 4 294 7.4E-14 T 14-10-2018 IPR038186 CHAD domain superfamily Atu4492 fc2d761f73b8144fd3b2232dd4a92d2c 302 Pfam PF05235 CHAD domain 36 242 7.7E-25 T 14-10-2018 IPR007899 CHAD domain Atu2790 483690f90c56cf45fbdbc3b8c0e9d3ab 201 SUPERFAMILY SSF52016 1 192 1.37E-60 T 14-10-2018 Atu2790 483690f90c56cf45fbdbc3b8c0e9d3ab 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 43.448 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Atu2790 483690f90c56cf45fbdbc3b8c0e9d3ab 201 Pfam PF00694 Aconitase C-terminal domain 1 122 4.8E-37 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Atu2790 483690f90c56cf45fbdbc3b8c0e9d3ab 201 Gene3D G3DSA:3.20.19.10 1 175 1.2E-74 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Atu2790 483690f90c56cf45fbdbc3b8c0e9d3ab 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 2.4E-76 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 PIRSF PIRSF037116 1 258 1.4E-149 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 Gene3D G3DSA:3.40.50.300 4 258 1.1E-67 T 14-10-2018 Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 5 256 1.3E-122 T 14-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 Pfam PF00005 ABC transporter 23 179 3.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 SUPERFAMILY SSF52540 5 254 1.57E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0177 3061f7ee7f2cc761c24779b537cc1b8a 258 SMART SM00382 31 229 3.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3657 758f1ff1d7862d7f4c5fc5e2b2cdd3b8 82 Pfam PF07883 Cupin domain 8 70 1.9E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu3657 758f1ff1d7862d7f4c5fc5e2b2cdd3b8 82 SUPERFAMILY SSF51182 10 76 2.35E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3657 758f1ff1d7862d7f4c5fc5e2b2cdd3b8 82 Gene3D G3DSA:2.60.120.10 1 81 3.0E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu0796 8f9f0518734098d81a7b65b1e317efb9 251 SUPERFAMILY SSF53474 6 244 3.44E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0796 8f9f0518734098d81a7b65b1e317efb9 251 Pfam PF00326 Prolyl oligopeptidase family 91 227 2.7E-18 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Atu0796 8f9f0518734098d81a7b65b1e317efb9 251 Gene3D G3DSA:3.40.50.1820 15 245 2.5E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3553 748481c96a1e8debfe8c4758b9e1505c 442 SUPERFAMILY SSF51445 52 331 4.33E-20 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu3553 748481c96a1e8debfe8c4758b9e1505c 442 Gene3D G3DSA:3.20.20.80 51 333 4.7E-14 T 14-10-2018 Atu3803 29b5df33f55ddd1d8a0a5ff9ec425cdd 500 Gene3D G3DSA:1.20.200.10 194 499 4.8E-87 T 14-10-2018 Atu3803 29b5df33f55ddd1d8a0a5ff9ec425cdd 500 Gene3D G3DSA:1.10.275.10 1 193 1.9E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Atu3803 29b5df33f55ddd1d8a0a5ff9ec425cdd 500 SUPERFAMILY SSF48557 8 494 3.3E-151 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu3803 29b5df33f55ddd1d8a0a5ff9ec425cdd 500 Pfam PF00221 Aromatic amino acid lyase 11 467 3.4E-148 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Atu5258 412cb49b23abda7337ae7f6d692eae14 359 SUPERFAMILY SSF56601 20 315 2.58E-49 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu5258 412cb49b23abda7337ae7f6d692eae14 359 Gene3D G3DSA:3.40.710.10 5 322 9.9E-46 T 14-10-2018 Atu5258 412cb49b23abda7337ae7f6d692eae14 359 Pfam PF00144 Beta-lactamase 70 314 3.7E-16 T 14-10-2018 IPR001466 Beta-lactamase-related Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 SMART SM00052 474 715 3.4E-94 T 14-10-2018 IPR001633 EAL domain Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 302 462 1.8E-33 T 14-10-2018 IPR000160 GGDEF domain Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 Pfam PF05228 CHASE4 domain 65 224 5.9E-21 T 14-10-2018 IPR007892 CHASE4 Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 Pfam PF00563 EAL domain 480 710 5.0E-70 T 14-10-2018 IPR001633 EAL domain Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 Gene3D G3DSA:3.20.20.450 477 727 4.3E-88 T 14-10-2018 IPR035919 EAL domain superfamily Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 SUPERFAMILY SSF141868 480 721 2.48E-80 T 14-10-2018 IPR035919 EAL domain superfamily Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 SUPERFAMILY SSF55073 308 464 2.43E-40 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 SMART SM00267 292 464 3.4E-46 T 14-10-2018 IPR000160 GGDEF domain Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 459 3.3E-38 T 14-10-2018 IPR000160 GGDEF domain Atu4490 9ebc1d3ff1b15486697a304cb2b963fc 734 Gene3D G3DSA:3.30.70.270 299 476 2.3E-46 T 14-10-2018 Atu2262 71d9f0a00d5b8cf00e4557faf9118203 163 Gene3D G3DSA:3.90.79.10 22 160 6.9E-22 T 14-10-2018 Atu2262 71d9f0a00d5b8cf00e4557faf9118203 163 SUPERFAMILY SSF55811 33 161 8.39E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu2262 71d9f0a00d5b8cf00e4557faf9118203 163 Pfam PF00293 NUDIX domain 34 147 3.7E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu4754 470380e846ec4deac9b3cdd38810295b 221 TIGRFAM TIGR03004 ectoine_ehuC: ectoine/hydroxyectoine ABC transporter, permease protein EhuC 4 217 1.6E-110 T 14-10-2018 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC Atu4754 470380e846ec4deac9b3cdd38810295b 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 210 1.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4754 470380e846ec4deac9b3cdd38810295b 221 Gene3D G3DSA:1.10.3720.10 1 215 3.8E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu4754 470380e846ec4deac9b3cdd38810295b 221 SUPERFAMILY SSF161098 8 195 6.41E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu4754 470380e846ec4deac9b3cdd38810295b 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 104 2.4E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu0767 303941124e582054183a4669db2bea39 287 SUPERFAMILY SSF81464 6 103 1.31E-27 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0767 303941124e582054183a4669db2bea39 287 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 114 245 2.7E-43 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0767 303941124e582054183a4669db2bea39 287 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 190 238 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0767 303941124e582054183a4669db2bea39 287 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 26 254 4.7E-55 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0767 303941124e582054183a4669db2bea39 287 Gene3D G3DSA:2.60.40.420 111 258 8.9E-52 T 14-10-2018 IPR008972 Cupredoxin Atu0767 303941124e582054183a4669db2bea39 287 SUPERFAMILY SSF49503 111 257 2.64E-48 T 14-10-2018 IPR008972 Cupredoxin Atu0767 303941124e582054183a4669db2bea39 287 PRINTS PR01166 Cytochrome c oxidase subunit II signature 189 209 1.9E-37 T 14-10-2018 Atu0767 303941124e582054183a4669db2bea39 287 PRINTS PR01166 Cytochrome c oxidase subunit II signature 87 107 1.9E-37 T 14-10-2018 Atu0767 303941124e582054183a4669db2bea39 287 PRINTS PR01166 Cytochrome c oxidase subunit II signature 209 226 1.9E-37 T 14-10-2018 Atu0767 303941124e582054183a4669db2bea39 287 PRINTS PR01166 Cytochrome c oxidase subunit II signature 110 129 1.9E-37 T 14-10-2018 Atu0767 303941124e582054183a4669db2bea39 287 PRINTS PR01166 Cytochrome c oxidase subunit II signature 227 244 1.9E-37 T 14-10-2018 Atu0767 303941124e582054183a4669db2bea39 287 PRINTS PR01166 Cytochrome c oxidase subunit II signature 75 87 1.9E-37 T 14-10-2018 Atu0767 303941124e582054183a4669db2bea39 287 Gene3D G3DSA:1.10.287.90 14 109 4.8E-31 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0767 303941124e582054183a4669db2bea39 287 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 15 101 3.5E-25 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 SUPERFAMILY SSF52172 2 184 2.7E-37 T 14-10-2018 IPR011006 CheY-like superfamily Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 Gene3D G3DSA:1.10.10.10 128 227 2.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 3.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 Pfam PF00072 Response regulator receiver domain 6 117 7.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 SMART SM00862 150 225 1.7E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 SMART SM00448 4 116 7.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2763 1caf3af7399bae23a30cf760d6d7b627 227 Gene3D G3DSA:3.40.50.2300 1 127 7.0E-34 T 14-10-2018 Atu5418 34d55ea9aa278613ae2da3bc38be6675 360 Gene3D G3DSA:1.10.1040.10 191 342 1.8E-32 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu5418 34d55ea9aa278613ae2da3bc38be6675 360 SUPERFAMILY SSF51735 1 123 9.88E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5418 34d55ea9aa278613ae2da3bc38be6675 360 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 182 322 6.8E-32 T 14-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Atu5418 34d55ea9aa278613ae2da3bc38be6675 360 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 7.5E-7 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Atu5418 34d55ea9aa278613ae2da3bc38be6675 360 Gene3D G3DSA:3.40.50.720 1 189 1.1E-33 T 14-10-2018 Atu5418 34d55ea9aa278613ae2da3bc38be6675 360 SUPERFAMILY SSF48179 184 353 1.73E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2366 69583e67e1f159fb925af00d78373d60 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2366 69583e67e1f159fb925af00d78373d60 258 PIRSF PIRSF039085 6 258 7.9E-116 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu2366 69583e67e1f159fb925af00d78373d60 258 SUPERFAMILY SSF52540 9 253 2.54E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2366 69583e67e1f159fb925af00d78373d60 258 SMART SM00382 33 231 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2366 69583e67e1f159fb925af00d78373d60 258 Pfam PF00005 ABC transporter 24 183 8.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2366 69583e67e1f159fb925af00d78373d60 258 Gene3D G3DSA:3.40.50.300 6 256 2.4E-73 T 14-10-2018 Atu1174 38f02b75c11020207e69603a4072dcb7 712 PIRSF PIRSF001265 1 712 7.9E-236 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu1174 38f02b75c11020207e69603a4072dcb7 712 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 6 712 7.1E-262 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu1174 38f02b75c11020207e69603a4072dcb7 712 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 711 24.918 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu1174 38f02b75c11020207e69603a4072dcb7 712 Pfam PF03030 Inorganic H+ pyrophosphatase 12 705 2.9E-249 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu3243 1ba090c789131344bf7871e44e8b9fd3 453 Pfam PF01425 Amidase 27 440 2.6E-84 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu3243 1ba090c789131344bf7871e44e8b9fd3 453 ProSitePatterns PS00571 Amidases signature. 154 185 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Atu3243 1ba090c789131344bf7871e44e8b9fd3 453 SUPERFAMILY SSF75304 6 451 3.27E-114 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu3243 1ba090c789131344bf7871e44e8b9fd3 453 Gene3D G3DSA:3.90.1300.10 6 450 1.9E-122 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu1946 8eade37335c0fdc5c016054f30597296 213 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site Atu1946 8eade37335c0fdc5c016054f30597296 213 Gene3D G3DSA:2.40.50.620 32 97 3.2E-27 T 14-10-2018 Atu1946 8eade37335c0fdc5c016054f30597296 213 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.251 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1946 8eade37335c0fdc5c016054f30597296 213 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.6E-85 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1946 8eade37335c0fdc5c016054f30597296 213 Pfam PF00297 Ribosomal protein L3 87 181 4.6E-14 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1946 8eade37335c0fdc5c016054f30597296 213 Gene3D G3DSA:2.40.30.10 130 211 2.1E-17 T 14-10-2018 Atu1946 8eade37335c0fdc5c016054f30597296 213 SUPERFAMILY SSF50447 1 211 1.24E-79 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu2448 5082f0c6e616d6276efabbf127732f63 302 SUPERFAMILY SSF103481 49 148 1.7E-11 T 14-10-2018 Atu2448 5082f0c6e616d6276efabbf127732f63 302 Pfam PF00892 EamA-like transporter family 161 293 2.7E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2448 5082f0c6e616d6276efabbf127732f63 302 Pfam PF00892 EamA-like transporter family 11 144 4.7E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2448 5082f0c6e616d6276efabbf127732f63 302 SUPERFAMILY SSF103481 197 297 1.96E-13 T 14-10-2018 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 5.5E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 5.5E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 5.5E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 101 5.5E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3930 e9053864da74b92e6f697415ee9f5887 336 Pfam PF00561 alpha/beta hydrolase fold 60 295 8.8E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00412 Epoxide hydrolase signature 145 158 5.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00412 Epoxide hydrolase signature 86 101 5.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00412 Epoxide hydrolase signature 131 144 5.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3930 e9053864da74b92e6f697415ee9f5887 336 PRINTS PR00412 Epoxide hydrolase signature 256 272 5.8E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3930 e9053864da74b92e6f697415ee9f5887 336 Gene3D G3DSA:3.40.50.1820 28 314 4.6E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3930 e9053864da74b92e6f697415ee9f5887 336 SUPERFAMILY SSF53474 39 310 4.29E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu8178 29c1744e7be993cb7fcb666069a66be3 345 Pfam PF10983 Protein of unknown function (DUF2793) 23 108 7.5E-29 T 14-10-2018 IPR021251 Protein of unknown function DUF2793 Atu2647 2f73ac492301067851dc76cbfe7c74fb 214 SUPERFAMILY SSF53335 33 182 9.34E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2647 2f73ac492301067851dc76cbfe7c74fb 214 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 76 128 1.4E-10 T 14-10-2018 Atu2647 2f73ac492301067851dc76cbfe7c74fb 214 Gene3D G3DSA:3.40.50.150 31 212 3.9E-21 T 14-10-2018 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 Pfam PF02073 Thermophilic metalloprotease (M29) 10 411 1.4E-164 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 159 181 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 392 411 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 83 102 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 248 267 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 327 348 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 304 324 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 366 388 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 18 35 2.2E-73 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 SUPERFAMILY SSF144052 9 412 9.81E-141 T 14-10-2018 Atu0274 801f72e4e94a3f7797c5b94d1cf570cc 412 Gene3D G3DSA:3.40.1830.10 8 180 3.9E-56 T 14-10-2018 IPR035097 Peptidase M29, N-terminal Atu4710 d5bd456f08b6d2575efd4f3f94099ee3 550 Pfam PF07690 Major Facilitator Superfamily 42 437 3.7E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu4710 d5bd456f08b6d2575efd4f3f94099ee3 550 Gene3D G3DSA:1.20.1250.20 25 484 7.0E-34 T 14-10-2018 Atu4710 d5bd456f08b6d2575efd4f3f94099ee3 550 SUPERFAMILY SSF103473 24 484 3.14E-42 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0482 6605751706daa7d6e743f8bcd4bd6ece 250 Pfam PF01522 Polysaccharide deacetylase 28 150 4.0E-19 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atu0482 6605751706daa7d6e743f8bcd4bd6ece 250 SUPERFAMILY SSF88713 20 245 1.11E-28 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu0482 6605751706daa7d6e743f8bcd4bd6ece 250 Gene3D G3DSA:3.20.20.370 23 247 1.5E-24 T 14-10-2018 Atu3109 1ba66fbfa28632c62aad3f6eab591dac 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 123 298 1.4E-47 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu3109 1ba66fbfa28632c62aad3f6eab591dac 338 SUPERFAMILY SSF51735 114 299 3.72E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3109 1ba66fbfa28632c62aad3f6eab591dac 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 329 7.0E-8 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu3109 1ba66fbfa28632c62aad3f6eab591dac 338 Gene3D G3DSA:3.40.50.720 110 297 4.9E-99 T 14-10-2018 Atu3109 1ba66fbfa28632c62aad3f6eab591dac 338 SUPERFAMILY SSF52283 23 122 2.49E-11 T 14-10-2018 Atu3109 1ba66fbfa28632c62aad3f6eab591dac 338 Gene3D G3DSA:3.40.50.720 11 319 4.9E-99 T 14-10-2018 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 Gene3D G3DSA:3.40.50.720 1 145 2.6E-55 T 14-10-2018 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 8.3E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 8.3E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 8.3E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 8.3E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 8.3E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 46.018 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 303 1.3E-29 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 SUPERFAMILY SSF56327 144 311 5.19E-56 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 309 8.3E-128 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 SUPERFAMILY SSF51735 5 144 3.44E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 PIRSF PIRSF000102 1 314 1.9E-100 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 4.1E-37 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu2639 27586c0d3093d9719f59646e5a4f77c8 320 Gene3D G3DSA:3.90.110.10 147 319 3.7E-66 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Atu2792 7946d4e4a511257c88accb10cfb3dfc2 377 Pfam PF00034 Cytochrome c 193 345 3.6E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu2792 7946d4e4a511257c88accb10cfb3dfc2 377 Gene3D G3DSA:1.10.760.10 1 162 2.7E-57 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu2792 7946d4e4a511257c88accb10cfb3dfc2 377 Pfam PF03150 Di-haem cytochrome c peroxidase 2 175 9.1E-42 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Atu2792 7946d4e4a511257c88accb10cfb3dfc2 377 SUPERFAMILY SSF46626 3 157 1.3E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu2792 7946d4e4a511257c88accb10cfb3dfc2 377 Gene3D G3DSA:1.10.760.10 163 366 2.7E-66 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu2792 7946d4e4a511257c88accb10cfb3dfc2 377 SUPERFAMILY SSF46626 151 346 3.51E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu3266 3528e3bbb4cf19586649e17ae77949ae 407 SUPERFAMILY SSF51556 70 334 1.53E-59 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3266 3528e3bbb4cf19586649e17ae77949ae 407 Pfam PF01979 Amidohydrolase family 66 367 4.8E-10 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu3266 3528e3bbb4cf19586649e17ae77949ae 407 Gene3D G3DSA:2.30.40.10 56 391 8.1E-219 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3266 3528e3bbb4cf19586649e17ae77949ae 407 PIRSF PIRSF039004 8 401 2.3E-137 T 14-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 Atu3266 3528e3bbb4cf19586649e17ae77949ae 407 SUPERFAMILY SSF51338 17 381 2.36E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3266 3528e3bbb4cf19586649e17ae77949ae 407 Gene3D G3DSA:3.20.20.140 71 313 8.1E-219 T 14-10-2018 Atu1424 3c5d03bc2b482b07fc8fa8e9754a0196 281 SUPERFAMILY SSF51569 17 280 1.01E-102 T 14-10-2018 Atu1424 3c5d03bc2b482b07fc8fa8e9754a0196 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 20 281 52.243 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atu1424 3c5d03bc2b482b07fc8fa8e9754a0196 281 Pfam PF00793 DAHP synthetase I family 16 270 3.9E-67 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atu1424 3c5d03bc2b482b07fc8fa8e9754a0196 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 25 280 2.5E-122 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Atu1424 3c5d03bc2b482b07fc8fa8e9754a0196 281 Gene3D G3DSA:3.20.20.70 12 281 5.5E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0802 72eaa6ad159ca60926ad830fd62f53d1 323 SUPERFAMILY SSF54593 40 190 5.07E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0802 72eaa6ad159ca60926ad830fd62f53d1 323 SUPERFAMILY SSF54593 203 321 5.5E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0802 72eaa6ad159ca60926ad830fd62f53d1 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 207 299 2.8E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0802 72eaa6ad159ca60926ad830fd62f53d1 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 49 160 5.7E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0802 72eaa6ad159ca60926ad830fd62f53d1 323 Gene3D G3DSA:3.10.180.10 206 323 7.5E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0802 72eaa6ad159ca60926ad830fd62f53d1 323 Gene3D G3DSA:3.10.180.10 47 170 6.0E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu5346 d8bad4710d6d270145846ef64947a7b0 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 267 1.4E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5346 d8bad4710d6d270145846ef64947a7b0 275 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 42 3.2E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu5346 d8bad4710d6d270145846ef64947a7b0 275 Gene3D G3DSA:1.10.3720.10 64 270 6.7E-16 T 14-10-2018 IPR035906 MetI-like superfamily Atu5346 d8bad4710d6d270145846ef64947a7b0 275 SUPERFAMILY SSF161098 69 256 3.01E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 355 363 2.1E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 386 2.1E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 413 2.1E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 420 432 2.1E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 2.1E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 15 29 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 SUPERFAMILY SSF51445 7 446 2.51E-157 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 TIGRFAM TIGR03356 BGL: beta-galactosidase 11 442 3.1E-187 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 Pfam PF00232 Glycosyl hydrolase family 1 9 447 7.0E-183 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 Gene3D G3DSA:3.20.20.80 3 449 8.1E-166 T 14-10-2018 Atu4485 101b68b2221620605ac4a3a4e0ec7f80 459 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 355 363 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Pfam PF02491 SHS2 domain inserted in FTSA 115 187 5.5E-20 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Gene3D G3DSA:3.30.420.40 222 380 1.4E-96 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 SUPERFAMILY SSF53067 224 406 1.69E-40 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Hamap MF_02033 Cell division protein FtsA [ftsA]. 21 443 26.21 T 14-10-2018 IPR020823 Cell division protein FtsA Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 SMART SM00842 25 221 5.4E-80 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Pfam PF14450 Cell division protein FtsA 27 220 2.8E-9 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Gene3D G3DSA:3.30.420.40 28 400 1.4E-96 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Gene3D G3DSA:3.30.1490.110 110 194 1.4E-96 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 25 405 1.2E-104 T 14-10-2018 IPR020823 Cell division protein FtsA Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Gene3D G3DSA:3.90.640.10 260 328 1.4E-96 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 Pfam PF14450 Cell division protein FtsA 232 402 6.1E-23 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 PIRSF PIRSF003101 17 443 1.0E-124 T 14-10-2018 IPR020823 Cell division protein FtsA Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 SUPERFAMILY SSF53067 27 222 1.3E-46 T 14-10-2018 Atu2087 dee0d48ef06b95028bd09c7b0c76c6a7 443 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 132 269 0.005 T 14-10-2018 Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 PIRSF PIRSF002741 84 222 1.0E-16 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 PIRSF PIRSF002741 261 515 1.3E-18 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 PIRSF PIRSF002741 552 619 57.0 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 Gene3D G3DSA:3.10.105.10 341 592 6.8E-34 T 14-10-2018 Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 SUPERFAMILY SSF53850 85 613 9.95E-74 T 14-10-2018 Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 514 8.5E-66 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu2587 6c3590bd40a46c1ec66f3ea92584941f 633 Gene3D G3DSA:3.40.190.10 57 329 1.2E-30 T 14-10-2018 Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 134 3.4E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 SUPERFAMILY SSF50129 1 184 1.52E-52 T 14-10-2018 IPR011032 GroES-like superfamily Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 SUPERFAMILY SSF51735 142 308 2.52E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 SMART SM00829 14 338 7.2E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 Gene3D G3DSA:3.90.180.10 9 331 3.2E-128 T 14-10-2018 Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 Pfam PF00107 Zinc-binding dehydrogenase 179 302 1.3E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu0626 59e9035c514c1e51d67ce10eeeb4f3b2 342 Gene3D G3DSA:3.40.50.720 152 289 3.2E-128 T 14-10-2018 Atu4280 99facf35fe81f4163ca674e952a6fa38 259 Gene3D G3DSA:3.40.50.720 4 246 1.2E-55 T 14-10-2018 Atu4280 99facf35fe81f4163ca674e952a6fa38 259 Pfam PF00106 short chain dehydrogenase 7 185 1.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 6.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 6.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4280 99facf35fe81f4163ca674e952a6fa38 259 SUPERFAMILY SSF51735 6 227 1.33E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 SUPERFAMILY SSF56235 2 233 7.38E-73 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 SUPERFAMILY SSF53697 244 608 1.34E-103 T 14-10-2018 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 38.713 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Gene3D G3DSA:3.60.20.10 2 240 3.4E-73 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Gene3D G3DSA:3.40.50.10490 444 593 7.6E-137 T 14-10-2018 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Pfam PF13522 Glutamine amidotransferase domain 61 189 1.3E-19 T 14-10-2018 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Pfam PF01380 SIS domain 295 414 4.9E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Pfam PF01380 SIS domain 461 590 5.3E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 1.8E-233 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Atu1786 9d42c7563d8871d6b58737ccd11d0d31 608 Gene3D G3DSA:3.40.50.10490 246 607 7.6E-137 T 14-10-2018 Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 4 169 33.798 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 Gene3D G3DSA:3.90.79.10 2 167 1.6E-40 T 14-10-2018 Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 SUPERFAMILY SSF55811 6 165 1.19E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 PRINTS PR00502 NUDIX hydrolase family signature 59 74 9.7E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 PRINTS PR00502 NUDIX hydrolase family signature 45 59 9.7E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu2772 6245b21d9ca925d36a5d36d6d90b1e97 170 Pfam PF00293 NUDIX domain 10 159 6.9E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 Gene3D G3DSA:1.10.8.410 269 320 2.7E-5 T 14-10-2018 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 SUPERFAMILY SSF64518 1 320 2.75E-60 T 14-10-2018 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 138 9.4E-28 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 Gene3D G3DSA:1.20.1330.10 44 139 3.7E-16 T 14-10-2018 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 Gene3D G3DSA:1.20.58.1830 4 32 3.7E-16 T 14-10-2018 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 PRINTS PR00207 Flagellin signature 107 130 2.0E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 PRINTS PR00207 Flagellin signature 75 94 2.0E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 PRINTS PR00207 Flagellin signature 36 53 2.0E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0543 efe6801a9d3aab51268e5e3d00be50c0 320 Pfam PF00700 Bacterial flagellin C-terminal helical region 235 319 1.6E-15 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu4809 ce1dc39d95f16c0679085d82cbd68285 399 Pfam PF13692 Glycosyl transferases group 1 182 319 2.5E-25 T 14-10-2018 Atu4809 ce1dc39d95f16c0679085d82cbd68285 399 Gene3D G3DSA:3.40.50.2000 163 338 3.9E-47 T 14-10-2018 Atu4809 ce1dc39d95f16c0679085d82cbd68285 399 Gene3D G3DSA:3.40.50.2000 9 350 3.9E-47 T 14-10-2018 Atu4809 ce1dc39d95f16c0679085d82cbd68285 399 Pfam PF13439 Glycosyltransferase Family 4 11 165 1.8E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu4809 ce1dc39d95f16c0679085d82cbd68285 399 SUPERFAMILY SSF53756 6 352 2.16E-63 T 14-10-2018 Atu3458 b160eea5815cf70af80833bd1b3074b2 295 Gene3D G3DSA:1.10.3720.10 81 288 5.8E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu3458 b160eea5815cf70af80833bd1b3074b2 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 68 5.7E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu3458 b160eea5815cf70af80833bd1b3074b2 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 290 4.5E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3458 b160eea5815cf70af80833bd1b3074b2 295 SUPERFAMILY SSF161098 85 273 1.31E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu0483 b6755b56769424c5631d7a910cd6ea0c 216 SUPERFAMILY SSF51306 90 213 2.75E-24 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atu0483 b6755b56769424c5631d7a910cd6ea0c 216 Gene3D G3DSA:2.10.109.10 86 216 8.7E-17 T 14-10-2018 Atu0483 b6755b56769424c5631d7a910cd6ea0c 216 Pfam PF00717 Peptidase S24-like 134 199 1.2E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.2E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 190 3.3E-75 T 14-10-2018 IPR017757 Transcriptional repressor BetI Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 SUPERFAMILY SSF48498 81 194 6.45E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 Gene3D G3DSA:1.10.357.10 6 194 1.7E-39 T 14-10-2018 Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 SUPERFAMILY SSF46689 6 86 1.13E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 94.055 T 14-10-2018 IPR017757 Transcriptional repressor BetI Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 190 1.1E-28 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0828 cc782bd575db27414cbaa09b4bee5e73 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.7E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2123 0e8d35ded7d6416b6435b6e3c30936c2 296 SUPERFAMILY SSF51730 7 288 1.71E-89 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Atu2123 0e8d35ded7d6416b6435b6e3c30936c2 296 Pfam PF02219 Methylenetetrahydrofolate reductase 7 287 2.2E-84 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Atu2123 0e8d35ded7d6416b6435b6e3c30936c2 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 14 286 2.9E-102 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Atu2123 0e8d35ded7d6416b6435b6e3c30936c2 296 Gene3D G3DSA:3.20.20.220 1 295 6.7E-95 T 14-10-2018 Atu2334 dafcfd65478dd564edb28da34d9951dc 302 SUPERFAMILY SSF103481 191 296 8.76E-14 T 14-10-2018 Atu2334 dafcfd65478dd564edb28da34d9951dc 302 SUPERFAMILY SSF103481 44 143 4.97E-13 T 14-10-2018 Atu2334 dafcfd65478dd564edb28da34d9951dc 302 Pfam PF00892 EamA-like transporter family 12 143 6.6E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2334 dafcfd65478dd564edb28da34d9951dc 302 Pfam PF00892 EamA-like transporter family 156 289 4.7E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4022 2f02937500d549d56ef08ecbbe858233 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 76 708 4.1E-128 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Atu4022 2f02937500d549d56ef08ecbbe858233 710 Gene3D G3DSA:2.40.170.20 184 710 2.1E-137 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Atu4022 2f02937500d549d56ef08ecbbe858233 710 SUPERFAMILY SSF56935 28 710 5.7E-152 T 14-10-2018 Atu4022 2f02937500d549d56ef08ecbbe858233 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 174 4.6E-22 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu4022 2f02937500d549d56ef08ecbbe858233 710 Gene3D G3DSA:2.170.130.10 50 183 2.5E-41 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu4022 2f02937500d549d56ef08ecbbe858233 710 Pfam PF00593 TonB dependent receptor 248 709 2.1E-62 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu1032 f6f7bfcd427968438a434d3200f91446 192 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 27 173 1.0E-38 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 Atu3697 b6ea88b6a27159abe456cd78ce4aecf7 215 SUPERFAMILY SSF88697 9 198 2.46E-45 T 14-10-2018 IPR015947 PUA-like superfamily Atu3697 b6ea88b6a27159abe456cd78ce4aecf7 215 SMART SM00464 9 201 2.6E-9 T 14-10-2018 IPR003111 Lon, substrate-binding domain Atu3697 b6ea88b6a27159abe456cd78ce4aecf7 215 Gene3D G3DSA:2.30.130.40 2 116 1.3E-26 T 14-10-2018 Atu3697 b6ea88b6a27159abe456cd78ce4aecf7 215 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 198 2.3E-22 T 14-10-2018 IPR003111 Lon, substrate-binding domain Atu6074 a1f94c21676889ae32942a3238c67d8e 555 SMART SM00382 336 528 2.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6074 a1f94c21676889ae32942a3238c67d8e 555 SMART SM00382 34 232 3.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6074 a1f94c21676889ae32942a3238c67d8e 555 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 Gene3D G3DSA:3.40.50.300 305 555 7.2E-86 T 14-10-2018 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 Gene3D G3DSA:3.40.50.300 3 304 3.3E-82 T 14-10-2018 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 Pfam PF00005 ABC transporter 26 182 8.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 SUPERFAMILY SSF52540 307 550 6.23E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6074 a1f94c21676889ae32942a3238c67d8e 555 SUPERFAMILY SSF52540 5 253 3.06E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6074 a1f94c21676889ae32942a3238c67d8e 555 Pfam PF00005 ABC transporter 328 478 8.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 530 554 0.031 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu6074 a1f94c21676889ae32942a3238c67d8e 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 279 1.0E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 Gene3D G3DSA:3.30.450.20 66 175 4.0E-68 T 14-10-2018 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 Pfam PF02743 Cache domain 39 260 1.4E-31 T 14-10-2018 IPR033479 Double Cache domain 1 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 Gene3D G3DSA:1.10.287.950 380 683 4.0E-77 T 14-10-2018 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 SMART SM00283 434 681 2.7E-101 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 SUPERFAMILY SSF58104 401 684 4.45E-67 T 14-10-2018 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 SUPERFAMILY SSF158472 300 349 5.49E-9 T 14-10-2018 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 495 647 1.1E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 SMART SM00304 381 433 23.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 SMART SM00304 300 353 1.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 Gene3D G3DSA:3.30.450.20 53 272 4.0E-68 T 14-10-2018 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 Gene3D G3DSA:1.10.8.500 301 351 2.9E-14 T 14-10-2018 Atu2173 56f0c6f8e1f370e4a0b28b9994fe6b3c 696 SUPERFAMILY SSF103190 101 185 7.32E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 SUPERFAMILY SSF51735 11 253 1.97E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 Gene3D G3DSA:3.40.50.720 4 256 2.2E-80 T 14-10-2018 Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 2.2E-59 T 14-10-2018 Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 7.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 7.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 7.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1407 7b93d68153ae94f9963bb8d05fbf9703 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 7.2E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3249 a698b24487559892aeb7a0e2055a5c22 239 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 7 239 26.991 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Atu3249 a698b24487559892aeb7a0e2055a5c22 239 Gene3D G3DSA:2.160.20.70 130 239 3.6E-31 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Atu3249 a698b24487559892aeb7a0e2055a5c22 239 Gene3D G3DSA:3.30.750.120 2 111 4.5E-8 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Atu3249 a698b24487559892aeb7a0e2055a5c22 239 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 236 5.2E-47 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Atu3249 a698b24487559892aeb7a0e2055a5c22 239 SUPERFAMILY SSF63848 134 236 1.29E-29 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Atu3249 a698b24487559892aeb7a0e2055a5c22 239 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 135 234 7.5E-30 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Atu3249 a698b24487559892aeb7a0e2055a5c22 239 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 5 84 1.6E-6 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Atu0327 736f3ed3311e8abac841c5b603cf797e 238 SUPERFAMILY SSF55666 156 237 2.36E-22 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0327 736f3ed3311e8abac841c5b603cf797e 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 43.214 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Atu0327 736f3ed3311e8abac841c5b603cf797e 238 SUPERFAMILY SSF54211 1 182 3.24E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0327 736f3ed3311e8abac841c5b603cf797e 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site Atu0327 736f3ed3311e8abac841c5b603cf797e 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 7.6E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0327 736f3ed3311e8abac841c5b603cf797e 238 Gene3D G3DSA:3.30.230.70 10 238 5.6E-59 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu0327 736f3ed3311e8abac841c5b603cf797e 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 3.0E-117 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Atu0327 736f3ed3311e8abac841c5b603cf797e 238 Pfam PF03725 3' exoribonuclease family, domain 2 160 224 3.2E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Atu2224 e6a15a825c414a0682c0d9ecf5d724f7 505 SUPERFAMILY SSF53720 14 498 3.8E-164 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu2224 e6a15a825c414a0682c0d9ecf5d724f7 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu2224 e6a15a825c414a0682c0d9ecf5d724f7 505 Gene3D G3DSA:3.40.605.10 22 491 3.1E-165 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu2224 e6a15a825c414a0682c0d9ecf5d724f7 505 Gene3D G3DSA:3.40.309.10 265 463 3.1E-165 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu2224 e6a15a825c414a0682c0d9ecf5d724f7 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu2224 e6a15a825c414a0682c0d9ecf5d724f7 505 Pfam PF00171 Aldehyde dehydrogenase family 26 492 7.5E-168 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 Gene3D G3DSA:3.30.590.10 106 457 1.8E-142 T 14-10-2018 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 SUPERFAMILY SSF54368 3 101 1.05E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 4.9E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 Gene3D G3DSA:3.10.20.70 3 105 2.2E-39 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 Pfam PF00120 Glutamine synthetase, catalytic domain 104 466 5.8E-140 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 SUPERFAMILY SSF55931 104 468 2.65E-136 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 SMART SM01230 103 379 9.3E-146 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu1770 5a8ca7cd80f2a129aa4f951a49d4ce97 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 3.2E-203 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu3929 7ee0ffc3c437b1d18700a259ee9dcd18 190 Gene3D G3DSA:2.60.120.10 7 177 8.3E-53 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3929 7ee0ffc3c437b1d18700a259ee9dcd18 190 Pfam PF05962 HutD 7 174 8.7E-55 T 14-10-2018 IPR010282 Uncharacterised protein family HutD/Ves Atu3929 7ee0ffc3c437b1d18700a259ee9dcd18 190 Gene3D G3DSA:2.60.120.10 10 114 8.3E-53 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3929 7ee0ffc3c437b1d18700a259ee9dcd18 190 SUPERFAMILY SSF51182 1 183 3.02E-53 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu5534 713d38207ba776e2e86331aa7c4aa9ac 249 SUPERFAMILY SSF52540 5 244 3.44E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5534 713d38207ba776e2e86331aa7c4aa9ac 249 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 5 244 6.8E-105 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD Atu5534 713d38207ba776e2e86331aa7c4aa9ac 249 Gene3D G3DSA:3.40.50.300 2 246 1.6E-54 T 14-10-2018 Atu5534 713d38207ba776e2e86331aa7c4aa9ac 249 Pfam PF00005 ABC transporter 22 175 8.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5534 713d38207ba776e2e86331aa7c4aa9ac 249 SMART SM00382 30 222 1.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5534 713d38207ba776e2e86331aa7c4aa9ac 249 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 222 244 5.7E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu5010 2ababbd3f53093984d356ff52ae019d2 66 SUPERFAMILY SSF52218 7 63 3.39E-8 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu5010 2ababbd3f53093984d356ff52ae019d2 66 Gene3D G3DSA:3.40.50.360 2 64 8.6E-9 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu5010 2ababbd3f53093984d356ff52ae019d2 66 Pfam PF02525 Flavodoxin-like fold 6 60 1.9E-7 T 14-10-2018 IPR003680 Flavodoxin-like fold Atu0226 f66753233629f0b87af7b5d0ce541ac4 127 Pfam PF13629 Pilus formation protein N terminal region 20 88 3.1E-21 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal Atu0002 0a900e3b39c45eadb9abee88001eb151 199 Hamap MF_00528 Septum formation protein Maf [maf]. 4 198 25.106 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu0002 0a900e3b39c45eadb9abee88001eb151 199 PIRSF PIRSF006305 1 197 7.8E-40 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu0002 0a900e3b39c45eadb9abee88001eb151 199 SUPERFAMILY SSF52972 2 193 4.97E-45 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atu0002 0a900e3b39c45eadb9abee88001eb151 199 Pfam PF02545 Maf-like protein 5 193 1.1E-36 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu0002 0a900e3b39c45eadb9abee88001eb151 199 Gene3D G3DSA:3.90.950.10 1 197 6.3E-48 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atu5169 538114648b2bfa1aad9ce04e151df178 223 Gene3D G3DSA:3.10.450.230 83 223 1.4E-48 T 14-10-2018 Atu5169 538114648b2bfa1aad9ce04e151df178 223 SUPERFAMILY SSF54427 85 221 7.45E-42 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu5169 538114648b2bfa1aad9ce04e151df178 223 PIRSF PIRSF003299 1 223 8.0E-100 T 14-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 Atu5169 538114648b2bfa1aad9ce04e151df178 223 Pfam PF04335 VirB8 protein 13 220 7.5E-63 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 Gene3D G3DSA:3.40.190.10 179 277 2.4E-56 T 14-10-2018 Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 Gene3D G3DSA:3.40.190.10 99 300 2.4E-56 T 14-10-2018 Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 Pfam PF03466 LysR substrate binding domain 106 305 4.8E-28 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 SUPERFAMILY SSF53850 97 303 1.43E-43 T 14-10-2018 Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 Gene3D G3DSA:1.10.10.10 5 95 1.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 SUPERFAMILY SSF46785 9 93 5.17E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5197 18481ca393fe50e40dbfcf91ffbc88d0 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 7.4E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2653 af6a627664b3fe65caafffcfb83b472b 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 1.5E-27 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2653 af6a627664b3fe65caafffcfb83b472b 246 Gene3D G3DSA:3.40.50.10090 1 116 1.8E-18 T 14-10-2018 Atu2653 af6a627664b3fe65caafffcfb83b472b 246 SUPERFAMILY SSF69618 2 240 2.09E-40 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Atu2653 af6a627664b3fe65caafffcfb83b472b 246 Gene3D G3DSA:3.40.50.10090 120 242 1.1E-7 T 14-10-2018 Atu5272 8bf20c6ae57d33485a6c157f4970d7da 203 Gene3D G3DSA:3.40.30.10 4 190 1.9E-36 T 14-10-2018 Atu5272 8bf20c6ae57d33485a6c157f4970d7da 203 Gene3D G3DSA:1.20.1050.10 84 186 1.9E-36 T 14-10-2018 Atu5272 8bf20c6ae57d33485a6c157f4970d7da 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 123 187 1.4E-5 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal Atu5272 8bf20c6ae57d33485a6c157f4970d7da 203 SUPERFAMILY SSF52833 1 86 1.21E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu5272 8bf20c6ae57d33485a6c157f4970d7da 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 82 3.3E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu5272 8bf20c6ae57d33485a6c157f4970d7da 203 SUPERFAMILY SSF47616 86 192 1.95E-15 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu6014 b884b2c48c83cef3fe09aa163419c404 207 Pfam PF02027 RolB/RolC glucosidase family 1 203 1.1E-49 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu1826 ae2e7976f16bb1e379b054b2a47adfe0 225 SUPERFAMILY SSF53474 4 213 3.05E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1826 ae2e7976f16bb1e379b054b2a47adfe0 225 Gene3D G3DSA:3.40.50.1820 2 225 8.0E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1826 ae2e7976f16bb1e379b054b2a47adfe0 225 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 138 2.4E-7 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Atu3096 b605646f0df5c0af10242f7fb212ff1d 447 Gene3D G3DSA:3.40.190.10 33 388 1.8E-102 T 14-10-2018 Atu3096 b605646f0df5c0af10242f7fb212ff1d 447 Pfam PF13416 Bacterial extracellular solute-binding protein 48 355 1.3E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3096 b605646f0df5c0af10242f7fb212ff1d 447 SUPERFAMILY SSF53850 26 431 2.05E-59 T 14-10-2018 Atu3096 b605646f0df5c0af10242f7fb212ff1d 447 Gene3D G3DSA:3.40.190.10 148 429 1.8E-102 T 14-10-2018 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 SUPERFAMILY SSF51735 4 178 9.1E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 SMART SM01350 180 470 8.0E-185 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 SUPERFAMILY SSF48179 178 470 3.57E-115 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 255 267 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 469 6.8E-116 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 Gene3D G3DSA:1.20.5.320 440 470 4.8E-12 T 14-10-2018 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 Gene3D G3DSA:1.10.1040.10 182 437 1.7E-97 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 Gene3D G3DSA:3.40.50.720 1 181 7.7E-51 T 14-10-2018 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PIRSF PIRSF000109 1 475 1.5E-190 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 461 5.2E-190 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 251 278 3.3E-76 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 359 381 3.3E-76 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 3.3E-76 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 3.3E-76 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 121 146 3.3E-76 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 3.3E-76 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu1526 190feff724a76a6b3cec5fecfbc05cac 476 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 170 4.5E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 3.8E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 SUPERFAMILY SSF51230 501 574 1.44E-16 T 14-10-2018 IPR011053 Single hybrid motif Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 SMART SM00878 334 443 3.8E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 6.3E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 SUPERFAMILY SSF56059 114 323 4.77E-59 T 14-10-2018 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 Gene3D G3DSA:2.40.50.100 507 575 3.7E-18 T 14-10-2018 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 532 549 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 Pfam PF00364 Biotin-requiring enzyme 509 574 3.8E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 SUPERFAMILY SSF51246 328 445 2.72E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 1.1E-76 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 SUPERFAMILY SSF52440 1 112 1.15E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu3913 2ab54dcaa84d401ce9ba87b755834b1b 576 Gene3D G3DSA:3.30.470.130 1 449 1.7E-174 T 14-10-2018 Atu5212 9880b1a3ea2ad2a640505c670bc6ddfe 229 SUPERFAMILY SSF53474 4 219 2.92E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5212 9880b1a3ea2ad2a640505c670bc6ddfe 229 Gene3D G3DSA:3.40.50.1820 2 224 8.3E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5212 9880b1a3ea2ad2a640505c670bc6ddfe 229 Pfam PF12697 Alpha/beta hydrolase family 4 215 2.2E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1106 e6f46b6bb16864904743c0fb79920f0e 793 Pfam PF04453 Organic solvent tolerance protein 306 707 3.0E-84 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Atu1106 e6f46b6bb16864904743c0fb79920f0e 793 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 771 16.623 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Atu2435 2e1128f5c1c39068e5fe2c62b610d2f3 171 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 2.2E-22 T 14-10-2018 IPR000182 GNAT domain Atu2435 2e1128f5c1c39068e5fe2c62b610d2f3 171 SUPERFAMILY SSF55729 5 151 1.22E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2435 2e1128f5c1c39068e5fe2c62b610d2f3 171 Gene3D G3DSA:3.40.630.30 1 171 5.3E-52 T 14-10-2018 Atu4244 fbf6f266971cbb86c0b9e8a80abcc086 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 275 3.2E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4244 fbf6f266971cbb86c0b9e8a80abcc086 291 Gene3D G3DSA:1.10.3720.10 23 287 3.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu4244 fbf6f266971cbb86c0b9e8a80abcc086 291 SUPERFAMILY SSF161098 25 284 6.07E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 SUPERFAMILY SSF52540 37 302 9.07E-117 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 Pfam PF00117 Glutamine amidotransferase class-I 337 570 5.0E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 TIGRFAM TIGR00337 PyrG: CTP synthase 37 570 1.2E-227 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 SUPERFAMILY SSF52317 325 574 2.72E-79 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 Gene3D G3DSA:3.40.50.880 321 577 4.0E-98 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 Pfam PF06418 CTP synthase N-terminus 39 299 3.7E-118 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 Gene3D G3DSA:3.40.50.300 37 320 8.1E-121 T 14-10-2018 Atu1618 642f9b8f49077e7079c4e8e0f668dad6 578 Hamap MF_01227 CTP synthase [pyrG]. 38 575 49.666 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 80 103 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Pfam PF00732 GMC oxidoreductase 4 292 4.5E-100 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Gene3D G3DSA:3.30.410.40 149 466 2.2E-176 T 14-10-2018 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Gene3D G3DSA:4.10.450.10 36 194 2.2E-176 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Gene3D G3DSA:3.50.50.60 3 525 2.2E-176 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Gene3D G3DSA:1.10.1220.110 95 148 2.2E-176 T 14-10-2018 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 SUPERFAMILY SSF54373 287 469 1.18E-59 T 14-10-2018 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Pfam PF05199 GMC oxidoreductase 384 521 1.2E-41 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 SUPERFAMILY SSF51905 1 529 7.05E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 531 1.7E-287 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 PIRSF PIRSF000137 2 533 1.8E-138 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu0830 d5b490bbd66434df677f98275f9e8aaa 549 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 548 64.184 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Atu0213 191fd9a6018f13827f741249a6a8df88 434 SUPERFAMILY SSF51690 139 423 7.85E-88 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Atu0213 191fd9a6018f13827f741249a6a8df88 434 Gene3D G3DSA:3.20.140.10 1 409 5.7E-171 T 14-10-2018 Atu0213 191fd9a6018f13827f741249a6a8df88 434 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 190 424 2.6E-72 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Atu0213 191fd9a6018f13827f741249a6a8df88 434 SUPERFAMILY SSF54675 2 156 1.21E-44 T 14-10-2018 Atu0213 191fd9a6018f13827f741249a6a8df88 434 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 20 422 1.7E-91 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Atu0213 191fd9a6018f13827f741249a6a8df88 434 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 17 427 42.688 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Atu0213 191fd9a6018f13827f741249a6a8df88 434 PIRSF PIRSF000484 10 419 4.5E-65 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 SUPERFAMILY SSF53790 36 255 2.62E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 Gene3D G3DSA:3.40.1010.10 27 144 1.6E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 PIRSF PIRSF005917 28 310 7.8E-95 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 115 126 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 37 257 36.481 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 Gene3D G3DSA:3.30.950.10 145 260 7.9E-36 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 38 305 4.5E-73 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Atu0302 ced2b251e180760ce2222e2d0d63f0e9 313 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 38 238 2.3E-30 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu2099 46bef77d7261381d8618fb73a4750645 489 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 12 481 31.193 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Atu2099 46bef77d7261381d8618fb73a4750645 489 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 415 4.5E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Atu2099 46bef77d7261381d8618fb73a4750645 489 Gene3D G3DSA:3.40.1190.10 101 329 3.0E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2099 46bef77d7261381d8618fb73a4750645 489 SUPERFAMILY SSF53244 333 484 2.88E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2099 46bef77d7261381d8618fb73a4750645 489 SUPERFAMILY SSF63418 23 100 1.83E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Atu2099 46bef77d7261381d8618fb73a4750645 489 Gene3D G3DSA:3.90.190.20 337 488 7.3E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Atu2099 46bef77d7261381d8618fb73a4750645 489 SUPERFAMILY SSF53623 101 329 2.88E-69 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Atu2099 46bef77d7261381d8618fb73a4750645 489 Pfam PF08245 Mur ligase middle domain 108 310 1.1E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Atu2099 46bef77d7261381d8618fb73a4750645 489 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 481 8.8E-137 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Atu2099 46bef77d7261381d8618fb73a4750645 489 Pfam PF01225 Mur ligase family, catalytic domain 27 98 1.8E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Atu2099 46bef77d7261381d8618fb73a4750645 489 Gene3D G3DSA:3.40.1390.10 10 100 2.5E-22 T 14-10-2018 Atu3583 f34c6b043b7e6d92e4767353202f3392 186 Gene3D G3DSA:3.20.170.30 94 184 3.4E-30 T 14-10-2018 Atu3583 f34c6b043b7e6d92e4767353202f3392 186 SUPERFAMILY SSF56399 5 176 1.01E-58 T 14-10-2018 Atu3583 f34c6b043b7e6d92e4767353202f3392 186 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 4 167 9.3E-42 T 14-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 Atu3583 f34c6b043b7e6d92e4767353202f3392 186 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 1 174 34.845 T 14-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 Atu3583 f34c6b043b7e6d92e4767353202f3392 186 Gene3D G3DSA:1.10.10.970 2 74 5.0E-17 T 14-10-2018 Atu5076 8c11e6c126eeeaee0c5ccd7d8130cdbb 342 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 200 330 4.0E-13 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Atu5076 8c11e6c126eeeaee0c5ccd7d8130cdbb 342 Gene3D G3DSA:3.40.980.20 186 337 8.4E-13 T 14-10-2018 Atu5076 8c11e6c126eeeaee0c5ccd7d8130cdbb 342 Pfam PF07005 Putative sugar-binding N-terminal domain 2 121 1.8E-19 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Atu5076 8c11e6c126eeeaee0c5ccd7d8130cdbb 342 SUPERFAMILY SSF142764 2 336 1.09E-55 T 14-10-2018 Atu5076 8c11e6c126eeeaee0c5ccd7d8130cdbb 342 Gene3D G3DSA:3.40.50.10840 1 139 6.4E-23 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Atu3361 1461b4013bb439c621db09a462110127 448 Pfam PF03972 MmgE/PrpD family 18 403 1.9E-89 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 Atu3361 1461b4013bb439c621db09a462110127 448 Gene3D G3DSA:3.30.1330.120 270 403 2.7E-108 T 14-10-2018 Atu3361 1461b4013bb439c621db09a462110127 448 Gene3D G3DSA:1.10.4100.10 27 407 2.7E-108 T 14-10-2018 Atu3361 1461b4013bb439c621db09a462110127 448 SUPERFAMILY SSF103378 6 438 1.28E-101 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 Atu6091 7e24e1aae2c57f37d22e4ed5b9aa0ace 250 PIRSF PIRSF034285 1 250 1.1E-91 T 14-10-2018 IPR017026 Inducible mutagenesis protein A Atu6091 7e24e1aae2c57f37d22e4ed5b9aa0ace 250 Gene3D G3DSA:3.40.50.300 50 164 1.8E-16 T 14-10-2018 Atu6091 7e24e1aae2c57f37d22e4ed5b9aa0ace 250 SUPERFAMILY SSF52540 49 165 4.43E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1729 1c0d976836773c41df8a7ad3f166a0d1 263 SMART SM00852 14 176 1.1E-31 T 14-10-2018 IPR001453 MoaB/Mog domain Atu1729 1c0d976836773c41df8a7ad3f166a0d1 263 Gene3D G3DSA:3.40.980.10 10 176 2.7E-53 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atu1729 1c0d976836773c41df8a7ad3f166a0d1 263 Pfam PF00994 Probable molybdopterin binding domain 14 174 2.6E-33 T 14-10-2018 IPR001453 MoaB/Mog domain Atu1729 1c0d976836773c41df8a7ad3f166a0d1 263 SUPERFAMILY SSF53218 11 205 1.11E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Atu3428 8f181ee9ab0d3ad1e45662639b91234a 205 Pfam PF06821 Serine hydrolase 4 173 1.2E-63 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 Atu3428 8f181ee9ab0d3ad1e45662639b91234a 205 SUPERFAMILY SSF53474 3 172 9.81E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3428 8f181ee9ab0d3ad1e45662639b91234a 205 Gene3D G3DSA:3.40.50.1820 2 181 4.5E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu6194 82d797683f92147981a177eb67339cfd 175 Pfam PF00293 NUDIX domain 31 156 3.7E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu6194 82d797683f92147981a177eb67339cfd 175 SUPERFAMILY SSF55811 27 160 2.8E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu6194 82d797683f92147981a177eb67339cfd 175 Gene3D G3DSA:3.90.79.10 26 165 2.7E-20 T 14-10-2018 Atu0303 66d4dd73af79525951ab7b505498ab20 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 12 111 1.6E-20 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Atu0303 66d4dd73af79525951ab7b505498ab20 122 SUPERFAMILY SSF52980 19 117 1.31E-23 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Atu0303 66d4dd73af79525951ab7b505498ab20 122 Pfam PF02021 Uncharacterised protein family UPF0102 20 109 4.9E-21 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Atu0303 66d4dd73af79525951ab7b505498ab20 122 Gene3D G3DSA:3.40.1350.10 9 122 8.7E-29 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Atu0303 66d4dd73af79525951ab7b505498ab20 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 13 122 21.663 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1147 20.498 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 Gene3D G3DSA:3.40.50.300 1 253 2.2E-44 T 14-10-2018 Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 Gene3D G3DSA:3.40.50.300 916 1155 1.0E-46 T 14-10-2018 Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 SUPERFAMILY SSF75553 481 647 5.36E-10 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 PIRSF PIRSF005719 1 544 1.5E-101 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 PIRSF PIRSF005719 552 1154 2.1E-108 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 SUPERFAMILY SSF52540 1 1140 8.39E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 1138 6.0E-59 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Atu0801 eed3601c62f91b22d3cce3b15eca671c 1155 SMART SM00968 509 598 8.5E-6 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Atu4301 1185e1af30571f6fb9258e804f09d63a 252 SUPERFAMILY SSF51735 1 215 7.53E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4301 1185e1af30571f6fb9258e804f09d63a 252 Gene3D G3DSA:3.40.50.720 2 248 2.2E-35 T 14-10-2018 Atu4301 1185e1af30571f6fb9258e804f09d63a 252 Pfam PF13460 NAD(P)H-binding 7 173 2.7E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu5401 97191560aba91ea03deb6f694d507e34 277 SUPERFAMILY SSF161098 18 277 2.49E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu5401 97191560aba91ea03deb6f694d507e34 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 268 1.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5401 97191560aba91ea03deb6f694d507e34 277 Gene3D G3DSA:1.10.3720.10 15 264 6.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu2509 41c9a0596e095b372f1fc5e91713a6c7 319 Gene3D G3DSA:3.40.1190.20 6 319 3.7E-120 T 14-10-2018 IPR029056 Ribokinase-like Atu2509 41c9a0596e095b372f1fc5e91713a6c7 319 SUPERFAMILY SSF53613 9 304 2.49E-56 T 14-10-2018 IPR029056 Ribokinase-like Atu2509 41c9a0596e095b372f1fc5e91713a6c7 319 Pfam PF00294 pfkB family carbohydrate kinase 9 296 4.3E-39 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.8E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.8E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 SUPERFAMILY SSF46785 9 82 2.63E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 SMART SM00895 106 228 8.6E-17 T 14-10-2018 IPR011711 GntR, C-terminal Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 SMART SM00345 21 80 1.4E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 Gene3D G3DSA:1.20.120.530 104 238 3.2E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 Gene3D G3DSA:1.10.10.10 17 83 5.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 SUPERFAMILY SSF48008 107 235 2.88E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3176 6fb68d7a29a3cfaf4fa85b64a47eb385 238 Pfam PF07729 FCD domain 108 221 1.8E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu2321 17f0dc52f606a21169198f3bebca413a 431 Pfam PF05036 Sporulation related domain 350 427 5.9E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 Atu2321 17f0dc52f606a21169198f3bebca413a 431 Gene3D G3DSA:3.40.710.10 18 297 2.2E-77 T 14-10-2018 Atu2321 17f0dc52f606a21169198f3bebca413a 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 3.1E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu2321 17f0dc52f606a21169198f3bebca413a 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 3.1E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu2321 17f0dc52f606a21169198f3bebca413a 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 3.1E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu2321 17f0dc52f606a21169198f3bebca413a 431 SUPERFAMILY SSF110997 349 427 1.96E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atu2321 17f0dc52f606a21169198f3bebca413a 431 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 253 7.3E-59 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atu2321 17f0dc52f606a21169198f3bebca413a 431 SUPERFAMILY SSF56601 13 269 3.62E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 44 325 8.7E-20 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 Gene3D G3DSA:3.50.50.60 44 330 1.8E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 SUPERFAMILY SSF51905 43 331 6.28E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 45 64 5.7E-10 T 14-10-2018 Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 5.7E-10 T 14-10-2018 Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 Gene3D G3DSA:3.50.50.60 155 265 1.8E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 44 66 7.2E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 150 7.2E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 164 176 7.2E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu1623 6e8bc1d1b19a09ff7d9b0c7da2e64c1c 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 299 317 7.2E-13 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Atu0084 3ced53c824f393dff7eb540f368076a1 89 Pfam PF00312 Ribosomal protein S15 8 88 1.2E-35 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0084 3ced53c824f393dff7eb540f368076a1 89 Gene3D G3DSA:1.10.287.10 1 89 8.3E-34 T 14-10-2018 Atu0084 3ced53c824f393dff7eb540f368076a1 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.725 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0084 3ced53c824f393dff7eb540f368076a1 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0084 3ced53c824f393dff7eb540f368076a1 89 SMART SM01387 8 88 6.7E-51 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0084 3ced53c824f393dff7eb540f368076a1 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 3.0E-28 T 14-10-2018 Atu0084 3ced53c824f393dff7eb540f368076a1 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.4E-37 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0084 3ced53c824f393dff7eb540f368076a1 89 SUPERFAMILY SSF47060 3 89 2.94E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding Atu1329 c76e995c8463847f201adfe8e8b19180 204 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 14 198 2.3E-59 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Atu1329 c76e995c8463847f201adfe8e8b19180 204 Gene3D G3DSA:3.40.630.70 42 203 3.0E-61 T 14-10-2018 Atu1329 c76e995c8463847f201adfe8e8b19180 204 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 204 82.783 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Atu1329 c76e995c8463847f201adfe8e8b19180 204 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 14 184 6.6E-69 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Atu1329 c76e995c8463847f201adfe8e8b19180 204 SUPERFAMILY SSF55729 5 200 9.53E-76 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu5268 aa558f1f3c3f9cf2eacf81958133c5e4 370 Gene3D G3DSA:3.40.190.170 39 343 7.1E-121 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu5268 aa558f1f3c3f9cf2eacf81958133c5e4 370 Gene3D G3DSA:3.40.190.10 159 329 7.1E-121 T 14-10-2018 Atu5268 aa558f1f3c3f9cf2eacf81958133c5e4 370 PIRSF PIRSF039026 5 364 2.7E-118 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Atu5268 aa558f1f3c3f9cf2eacf81958133c5e4 370 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 327 1.1E-61 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu5268 aa558f1f3c3f9cf2eacf81958133c5e4 370 SUPERFAMILY SSF53850 145 271 9.51E-5 T 14-10-2018 Atu2567 4d45cc14e916c8b17d5743f828f1491e 65 Pfam PF02597 ThiS family 11 65 1.8E-11 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Atu2567 4d45cc14e916c8b17d5743f828f1491e 65 Gene3D G3DSA:3.10.20.30 1 65 2.3E-15 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu2567 4d45cc14e916c8b17d5743f828f1491e 65 SUPERFAMILY SSF54285 2 64 5.23E-14 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Atu2567 4d45cc14e916c8b17d5743f828f1491e 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 65 8.7E-18 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis Atu2717 da8d9680800101df65a6d2939942cd4c 217 Gene3D G3DSA:3.40.50.10240 6 213 2.4E-41 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Atu2717 da8d9680800101df65a6d2939942cd4c 217 SMART SM00983 142 206 5.8E-13 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Atu2717 da8d9680800101df65a6d2939942cd4c 217 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 7 207 1.7E-50 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Atu2717 da8d9680800101df65a6d2939942cd4c 217 SUPERFAMILY SSF63999 5 129 1.7E-20 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Atu2717 da8d9680800101df65a6d2939942cd4c 217 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 28 128 2.8E-11 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 152 3.7E-44 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 160 31.499 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 SUPERFAMILY SSF143243 7 185 9.94E-60 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 113 134 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 84 139 4.0E-27 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 Gene3D G3DSA:3.30.460.80 1 132 4.4E-40 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1270 24f0b3fb16c600a701d3b68ae0983034 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 152 7.5E-45 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 Gene3D G3DSA:3.40.50.300 5 231 2.8E-59 T 14-10-2018 Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 SMART SM00833 254 345 1.3E-9 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 SUPERFAMILY SSF90002 254 344 1.05E-19 T 14-10-2018 Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 SUPERFAMILY SSF52540 7 210 9.36E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 6 342 2.4E-167 T 14-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 254 344 3.0E-19 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 Gene3D G3DSA:3.30.1220.10 232 345 5.7E-17 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Atu2805 c51494e4bccf1c8ad5791088e66868cc 345 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 213 4.4E-56 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 22 482 46.209 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 PRINTS PR00315 GTP-binding elongation factor signature 165 174 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 PRINTS PR00315 GTP-binding elongation factor signature 92 100 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 PRINTS PR00315 GTP-binding elongation factor signature 32 45 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 PRINTS PR00315 GTP-binding elongation factor signature 112 122 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 PRINTS PR00315 GTP-binding elongation factor signature 128 139 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 SUPERFAMILY SSF50465 338 435 1.49E-21 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 Pfam PF00009 Elongation factor Tu GTP binding domain 32 229 2.3E-41 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 Gene3D G3DSA:2.40.30.10 244 329 1.4E-22 T 14-10-2018 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 Gene3D G3DSA:2.40.30.10 332 436 1.6E-23 T 14-10-2018 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 31 435 2.7E-182 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 SUPERFAMILY SSF52540 28 254 6.04E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 85 100 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 SUPERFAMILY SSF50447 244 329 3.53E-20 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Atu0816 c1cb808ac720baa416ba6e0f894dc287 494 Gene3D G3DSA:3.40.50.300 13 241 2.8E-64 T 14-10-2018 Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 SUPERFAMILY SSF52540 4 248 3.59E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 Pfam PF00005 ABC transporter 21 177 2.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 SMART SM00382 29 227 2.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 314 5.7E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 Gene3D G3DSA:3.40.50.300 1 328 3.0E-92 T 14-10-2018 Atu3436 ff043ea71eb61fb972e6e24a19bbd5fd 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 296 8.5E-13 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 Gene3D G3DSA:1.10.286.10 13 70 8.6E-20 T 14-10-2018 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 Pfam PF01227 GTP cyclohydrolase I 28 205 8.9E-76 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 85 101 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 28 206 1.2E-66 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 Gene3D G3DSA:3.30.1130.10 75 208 6.0E-56 T 14-10-2018 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 SUPERFAMILY SSF55620 20 206 1.78E-77 T 14-10-2018 Atu1749 a0f893621fe5cbc92ea4af2466479524 208 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 23 206 40.374 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 Gene3D G3DSA:1.10.10.10 1 85 2.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 Gene3D G3DSA:3.40.190.10 100 285 4.4E-47 T 14-10-2018 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 SUPERFAMILY SSF46785 4 111 3.14E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 Pfam PF03466 LysR substrate binding domain 92 288 5.9E-31 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.4E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 Gene3D G3DSA:3.40.190.10 160 259 4.4E-47 T 14-10-2018 Atu3155 aa11c122bdc22a2e4e833bc4fe787f7e 298 SUPERFAMILY SSF53850 92 293 9.77E-31 T 14-10-2018 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 949 25.641 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 Gene3D G3DSA:3.90.1150.10 759 896 9.7E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 SUPERFAMILY SSF53383 474 945 8.34E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 Gene3D G3DSA:3.40.640.10 100 358 6.3E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 Gene3D G3DSA:3.40.640.10 521 746 1.9E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 SUPERFAMILY SSF53383 21 399 3.82E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 Pfam PF02347 Glycine cleavage system P-protein 460 732 3.0E-8 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 Pfam PF02347 Glycine cleavage system P-protein 20 444 2.5E-180 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Atu1462 d9ae410f3ddf0614c0ce8b7ea3262ba4 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 943 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00155 Amicyanin family signature 61 76 3.0E-22 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00155 Amicyanin family signature 98 113 3.0E-22 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00155 Amicyanin family signature 82 97 3.0E-22 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00155 Amicyanin family signature 41 60 3.0E-22 T 14-10-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 SUPERFAMILY SSF49503 32 140 9.87E-27 T 14-10-2018 IPR008972 Cupredoxin Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00156 Type I copper blue protein family signature 61 76 1.2E-12 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00156 Type I copper blue protein family signature 47 60 1.2E-12 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 PRINTS PR00156 Type I copper blue protein family signature 93 107 1.2E-12 T 14-10-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 Atu3393 90a0edf834d81756204e4e4198316fda 146 Gene3D G3DSA:2.60.40.420 31 145 9.8E-30 T 14-10-2018 IPR008972 Cupredoxin Atu3393 90a0edf834d81756204e4e4198316fda 146 TIGRFAM TIGR02375 pseudoazurin: pseudoazurin 34 143 2.3E-37 T 14-10-2018 IPR012745 Pseudoazurin GO:0005507 Atu3393 90a0edf834d81756204e4e4198316fda 146 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 34 115 4.1E-13 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 16 479 2.0E-252 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 Gene3D G3DSA:3.40.50.300 88 363 2.8E-117 T 14-10-2018 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 SUPERFAMILY SSF52540 89 367 5.48E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2622 f9afaebc91a952979ac674ff4408c79f 484 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 361 4.0E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 PIRSF PIRSF039072 1 484 3.8E-285 T 14-10-2018 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 19 85 5.3E-22 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 SMART SM00382 154 338 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2622 f9afaebc91a952979ac674ff4408c79f 484 SUPERFAMILY SSF50615 14 87 6.02E-27 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 SUPERFAMILY SSF47917 364 479 1.46E-54 T 14-10-2018 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 Gene3D G3DSA:1.10.1140.10 364 484 8.3E-60 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 352 361 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 Hamap MF_01347 ATP synthase subunit beta [atpB]. 14 479 57.204 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Atu2622 f9afaebc91a952979ac674ff4408c79f 484 Gene3D G3DSA:2.40.10.170 3 87 1.8E-35 T 14-10-2018 Atu0150 7c723b600eb609523f39dc1104b5162f 407 SMART SM00825 Beta-ketoacyl synthase 4 407 6.3E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atu0150 7c723b600eb609523f39dc1104b5162f 407 Gene3D G3DSA:3.40.47.10 260 405 1.0E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0150 7c723b600eb609523f39dc1104b5162f 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 2.6E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atu0150 7c723b600eb609523f39dc1104b5162f 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 9.9E-39 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu0150 7c723b600eb609523f39dc1104b5162f 407 SUPERFAMILY SSF53901 215 404 3.34E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0150 7c723b600eb609523f39dc1104b5162f 407 Gene3D G3DSA:3.40.47.10 1 254 6.1E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0150 7c723b600eb609523f39dc1104b5162f 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Atu0150 7c723b600eb609523f39dc1104b5162f 407 SUPERFAMILY SSF53901 1 253 1.09E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 373 2.7E-107 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 SUPERFAMILY SSF53187 2 386 6.0E-88 T 14-10-2018 Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 Pfam PF07687 Peptidase dimerisation domain 188 281 8.1E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 Gene3D G3DSA:3.40.630.10 16 370 6.1E-134 T 14-10-2018 Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 Gene3D G3DSA:3.30.70.360 183 297 6.1E-134 T 14-10-2018 Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 SUPERFAMILY SSF55031 187 291 2.88E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 PIRSF PIRSF005962 2 387 2.0E-123 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu3635 e0ed52ad6e585fa33da254ed71b65ebc 387 Pfam PF01546 Peptidase family M20/M25/M40 75 382 3.5E-39 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu5082 6aad7a1b5fcd7f84bb3c119e3655d399 587 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 24 545 1.1E-163 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Atu5082 6aad7a1b5fcd7f84bb3c119e3655d399 587 SUPERFAMILY SSF48208 85 426 5.44E-37 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu0555 17b86cc4f19ce6544ee12d007dc9b0c6 130 PIRSF PIRSF002889 2 130 1.4E-16 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Atu0555 17b86cc4f19ce6544ee12d007dc9b0c6 130 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atu0555 17b86cc4f19ce6544ee12d007dc9b0c6 130 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 124 4.2E-17 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Atu0555 17b86cc4f19ce6544ee12d007dc9b0c6 130 Pfam PF00460 Flagella basal body rod protein 18 34 8.7E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atu8188 8a1e7b0770786902261a66e83bd76d3a 423 Pfam PF13480 Acetyltransferase (GNAT) domain 221 345 2.8E-21 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Atu8188 8a1e7b0770786902261a66e83bd76d3a 423 SUPERFAMILY SSF55729 226 346 5.3E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 Pfam PF01568 Molydopterin dinucleotide binding domain 647 756 3.3E-13 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 SUPERFAMILY SSF53706 50 632 3.14E-146 T 14-10-2018 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 SUPERFAMILY SSF50692 643 763 2.71E-17 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 Gene3D G3DSA:3.40.50.740 124 576 1.4E-71 T 14-10-2018 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 PIRSF PIRSF000144 1 764 0.0 T 14-10-2018 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 Gene3D G3DSA:2.40.40.20 647 761 1.2E-5 T 14-10-2018 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 16 761 5.9E-290 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 Pfam PF00384 Molybdopterin oxidoreductase 112 497 1.9E-26 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4776 02e1eed4f3bfba709521d2b3ead99e2c 764 Gene3D G3DSA:3.40.228.10 188 415 1.4E-71 T 14-10-2018 Atu1342 8e543c63df4830f050bcd642d7c87638 342 Pfam PF03462 PCRF domain 1 184 1.1E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atu1342 8e543c63df4830f050bcd642d7c87638 342 Pfam PF00472 RF-1 domain 193 302 2.7E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atu1342 8e543c63df4830f050bcd642d7c87638 342 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 209 225 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atu1342 8e543c63df4830f050bcd642d7c87638 342 Gene3D G3DSA:3.30.70.1660 94 323 1.2E-96 T 14-10-2018 Atu1342 8e543c63df4830f050bcd642d7c87638 342 Gene3D G3DSA:3.30.160.20 190 285 1.2E-96 T 14-10-2018 Atu1342 8e543c63df4830f050bcd642d7c87638 342 SMART SM00937 49 159 1.1E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Atu1342 8e543c63df4830f050bcd642d7c87638 342 Gene3D G3DSA:1.20.58.410 1 80 6.5E-18 T 14-10-2018 Atu1342 8e543c63df4830f050bcd642d7c87638 342 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 328 3.3E-147 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Atu1342 8e543c63df4830f050bcd642d7c87638 342 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 330 36.168 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Atu1342 8e543c63df4830f050bcd642d7c87638 342 SUPERFAMILY SSF75620 2 329 1.23E-128 T 14-10-2018 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 SUPERFAMILY SSF51395 403 1274 1.75E-156 T 14-10-2018 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Gene3D G3DSA:3.60.20.10 1 385 2.7E-94 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Pfam PF00310 Glutamine amidotransferases class-II 5 373 2.7E-72 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Pfam PF01493 GXGXG motif 1370 1537 9.8E-51 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Gene3D G3DSA:2.160.20.60 1314 1599 5.7E-78 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 SUPERFAMILY SSF56235 5 376 4.82E-86 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Gene3D G3DSA:3.20.20.70 387 736 6.9E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Pfam PF04898 Glutamate synthase central domain 408 681 4.3E-71 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Pfam PF01645 Conserved region in glutamate synthase 941 1252 1.3E-98 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 Gene3D G3DSA:3.20.20.70 923 1300 1.7E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0145 921b05e5c46324aba64bcd93aee21aaf 1782 SUPERFAMILY SSF69336 1370 1585 3.53E-64 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 Pfam PF04773 FecR protein 109 200 4.7E-17 T 14-10-2018 IPR006860 FecR protein Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 72 93 2.9E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 PIRSF PIRSF018266 2 311 9.9E-82 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 Gene3D G3DSA:2.60.120.1440 100 234 5.9E-21 T 14-10-2018 Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 Gene3D G3DSA:3.55.50.30 237 304 2.2E-6 T 14-10-2018 Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 Pfam PF16220 Domain of unknown function (DUF4880) 11 53 1.9E-10 T 14-10-2018 IPR032623 FecR, N-terminal Atu5310 5d11511b44d8c2d372c0a1913b8d3c49 311 Pfam PF16344 Domain of unknown function (DUF4974) 213 297 9.3E-9 T 14-10-2018 IPR032508 Protein FecR, C-terminal Atu0870 663efa4ee798d8e8ec7f9dbafa953c71 256 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 1 256 47.327 T 14-10-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 Atu0870 663efa4ee798d8e8ec7f9dbafa953c71 256 Pfam PF13489 Methyltransferase domain 14 134 1.1E-13 T 14-10-2018 Atu0870 663efa4ee798d8e8ec7f9dbafa953c71 256 Gene3D G3DSA:1.10.150.290 131 236 2.5E-92 T 14-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 Atu0870 663efa4ee798d8e8ec7f9dbafa953c71 256 Gene3D G3DSA:3.40.50.150 8 253 2.5E-92 T 14-10-2018 Atu0870 663efa4ee798d8e8ec7f9dbafa953c71 256 SUPERFAMILY SSF53335 4 255 8.21E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu6120 f397656b330116e74e884a5e01d613fb 92 SMART SM00411 2 91 7.2E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu6120 f397656b330116e74e884a5e01d613fb 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.4E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu6120 f397656b330116e74e884a5e01d613fb 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.4E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu6120 f397656b330116e74e884a5e01d613fb 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.4E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu6120 f397656b330116e74e884a5e01d613fb 92 Gene3D G3DSA:4.10.520.10 1 92 1.3E-27 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu6120 f397656b330116e74e884a5e01d613fb 92 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.3E-26 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu6120 f397656b330116e74e884a5e01d613fb 92 SUPERFAMILY SSF47729 3 91 4.71E-25 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu2725 86f422632458e68a4f098cd3385b4546 266 Gene3D G3DSA:1.10.10.10 2 57 4.7E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2725 86f422632458e68a4f098cd3385b4546 266 SUPERFAMILY SSF100950 78 224 4.19E-20 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu2725 86f422632458e68a4f098cd3385b4546 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Atu2725 86f422632458e68a4f098cd3385b4546 266 Pfam PF08220 DeoR-like helix-turn-helix domain 9 65 8.2E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu2725 86f422632458e68a4f098cd3385b4546 266 Pfam PF00455 DeoR C terminal sensor domain 77 231 4.3E-38 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Atu2725 86f422632458e68a4f098cd3385b4546 266 SMART SM01134 74 235 9.9E-48 T 14-10-2018 Atu2725 86f422632458e68a4f098cd3385b4546 266 SUPERFAMILY SSF46785 7 61 2.31E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2725 86f422632458e68a4f098cd3385b4546 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.4E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu2725 86f422632458e68a4f098cd3385b4546 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.4E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu2725 86f422632458e68a4f098cd3385b4546 266 SMART SM00420 9 61 1.6E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 Gene3D G3DSA:1.10.287.110 1 86 2.9E-22 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 Pfam PF01556 DnaJ C terminal domain 213 349 1.5E-19 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 Gene3D G3DSA:2.60.260.20 204 270 5.1E-6 T 14-10-2018 Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 Pfam PF00226 DnaJ domain 3 65 1.0E-20 T 14-10-2018 IPR001623 DnaJ domain Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 SUPERFAMILY SSF49493 278 356 5.36E-13 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 PRINTS PR00625 DnaJ domain signature 5 23 4.4E-16 T 14-10-2018 IPR001623 DnaJ domain Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 PRINTS PR00625 DnaJ domain signature 23 38 4.4E-16 T 14-10-2018 IPR001623 DnaJ domain Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 PRINTS PR00625 DnaJ domain signature 40 60 4.4E-16 T 14-10-2018 IPR001623 DnaJ domain Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 PRINTS PR00625 DnaJ domain signature 60 79 4.4E-16 T 14-10-2018 IPR001623 DnaJ domain Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 Gene3D G3DSA:2.60.260.20 273 350 8.9E-18 T 14-10-2018 Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 SUPERFAMILY SSF49493 206 270 1.7E-8 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 SMART SM00271 2 60 8.6E-20 T 14-10-2018 IPR001623 DnaJ domain Atu0758 6973e13637ab390cd59b0c0b1f5aff57 371 SUPERFAMILY SSF46565 1 71 3.93E-21 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu3076 89dc8ffce6a629cb3b51dccce21a9769 440 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 354 374 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Atu3076 89dc8ffce6a629cb3b51dccce21a9769 440 Pfam PF00860 Permease family 28 407 3.2E-89 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Atu3076 89dc8ffce6a629cb3b51dccce21a9769 440 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 426 4.7E-102 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 Gene3D G3DSA:3.40.50.300 3 222 8.7E-65 T 14-10-2018 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 Gene3D G3DSA:2.40.50.940 223 250 2.1E-12 T 14-10-2018 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 Pfam PF00005 ABC transporter 20 161 4.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 SUPERFAMILY SSF50331 237 334 1.19E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 Gene3D G3DSA:2.40.50.140 263 318 1.7E-12 T 14-10-2018 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 Pfam PF08402 TOBE domain 256 326 2.4E-13 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 SUPERFAMILY SSF52540 4 242 1.18E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 Gene3D G3DSA:2.40.50.940 251 327 1.7E-12 T 14-10-2018 Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 SMART SM00382 28 212 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3341 c98d30e4633e783c840356c9f3cb6d8e 342 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5237 fec89a123b5db3e1012649df223dbd99 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 251 2.1E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu5237 fec89a123b5db3e1012649df223dbd99 259 SUPERFAMILY SSF53850 5 252 4.18E-52 T 14-10-2018 Atu5237 fec89a123b5db3e1012649df223dbd99 259 Gene3D G3DSA:3.40.190.10 31 245 2.2E-54 T 14-10-2018 Atu5237 fec89a123b5db3e1012649df223dbd99 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Atu5237 fec89a123b5db3e1012649df223dbd99 259 SMART SM00062 34 253 9.1E-46 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu5237 fec89a123b5db3e1012649df223dbd99 259 Gene3D G3DSA:3.40.190.10 121 211 2.2E-54 T 14-10-2018 Atu5173 fd52158d6179785f082a2870169252dd 129 SUPERFAMILY SSF48179 72 120 8.73E-5 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu5173 fd52158d6179785f082a2870169252dd 129 Gene3D G3DSA:1.10.1040.10 70 126 7.1E-5 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu5173 fd52158d6179785f082a2870169252dd 129 Gene3D G3DSA:3.40.50.12340 1 69 3.5E-21 T 14-10-2018 Atu5173 fd52158d6179785f082a2870169252dd 129 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 69 9.7E-19 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu5173 fd52158d6179785f082a2870169252dd 129 SUPERFAMILY SSF51735 1 70 4.24E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4817 77b109ec59de7d90d61503afaec7b154 417 Gene3D G3DSA:3.40.50.2000 206 385 8.5E-22 T 14-10-2018 Atu4817 77b109ec59de7d90d61503afaec7b154 417 Pfam PF13579 Glycosyl transferase 4-like domain 17 195 1.1E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu4817 77b109ec59de7d90d61503afaec7b154 417 SUPERFAMILY SSF53756 6 398 1.77E-39 T 14-10-2018 Atu4817 77b109ec59de7d90d61503afaec7b154 417 Pfam PF13692 Glycosyl transferases group 1 222 366 1.2E-7 T 14-10-2018 Atu4817 77b109ec59de7d90d61503afaec7b154 417 Gene3D G3DSA:3.40.50.2000 4 204 4.0E-9 T 14-10-2018 Atu1708 99e3e4a6fa630e58057b1336af4f1d2b 281 Pfam PF02616 Segregation and condensation protein ScpA 48 263 3.1E-13 T 14-10-2018 IPR003768 Segregation and condensation protein A Atu3308 6123a69323c00f7cdbd96950ebd4c437 827 Pfam PF03170 Bacterial cellulose synthase subunit 116 709 7.3E-106 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Atu3308 6123a69323c00f7cdbd96950ebd4c437 827 Gene3D G3DSA:2.60.120.260 111 242 1.6E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Atu3308 6123a69323c00f7cdbd96950ebd4c437 827 Gene3D G3DSA:2.60.120.260 398 542 1.6E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Atu3651 f0b7d06588510f3a498518c68c40582a 288 SUPERFAMILY SSF53474 25 286 3.71E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3651 f0b7d06588510f3a498518c68c40582a 288 Pfam PF01738 Dienelactone hydrolase family 63 285 3.3E-23 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Atu3651 f0b7d06588510f3a498518c68c40582a 288 Gene3D G3DSA:3.40.50.1820 43 286 6.8E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0985 005b627ee648d6ad548ba1952319d364 311 SUPERFAMILY SSF103481 194 293 4.45E-13 T 14-10-2018 Atu0985 005b627ee648d6ad548ba1952319d364 311 SUPERFAMILY SSF103481 46 145 1.16E-10 T 14-10-2018 Atu0985 005b627ee648d6ad548ba1952319d364 311 Pfam PF00892 EamA-like transporter family 160 290 2.0E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0985 005b627ee648d6ad548ba1952319d364 311 Pfam PF00892 EamA-like transporter family 11 142 2.4E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2691 ee467a223de0f009327770e4f0263365 381 Gene3D G3DSA:3.30.70.270 202 365 1.5E-46 T 14-10-2018 Atu2691 ee467a223de0f009327770e4f0263365 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 363 1.5E-36 T 14-10-2018 IPR000160 GGDEF domain Atu2691 ee467a223de0f009327770e4f0263365 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 360 1.7E-35 T 14-10-2018 IPR000160 GGDEF domain Atu2691 ee467a223de0f009327770e4f0263365 381 SUPERFAMILY SSF55073 212 363 2.67E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2691 ee467a223de0f009327770e4f0263365 381 SMART SM00267 197 364 6.3E-46 T 14-10-2018 IPR000160 GGDEF domain Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 SMART SM00245 172 365 6.9E-83 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 Gene3D G3DSA:3.30.750.44 37 340 2.5E-99 T 14-10-2018 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 SMART SM00228 99 170 7.4E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 SUPERFAMILY SSF50156 89 182 3.1E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 Pfam PF13180 PDZ domain 99 178 1.3E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 Pfam PF03572 Peptidase family S41 197 364 1.4E-57 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 52 370 1.0E-102 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 SUPERFAMILY SSF52096 35 372 5.8E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 Gene3D G3DSA:2.30.42.10 99 186 2.5E-99 T 14-10-2018 Atu2774 7c1780b13b32a9fc32460e4a4f20916b 442 Gene3D G3DSA:3.90.226.10 187 362 2.5E-99 T 14-10-2018 Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 Hamap MF_02040 Iron-sulfur cluster carrier protein. 123 371 37.447 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 ProSitePatterns PS01215 Mrp family signature. 234 250 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 Pfam PF01883 Iron-sulfur cluster assembly protein 6 72 8.3E-15 T 14-10-2018 IPR002744 MIP18 family-like Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 SUPERFAMILY SSF52540 131 375 8.79E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 Gene3D G3DSA:3.30.300.130 1 94 1.0E-8 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 Gene3D G3DSA:3.40.50.300 120 369 1.2E-81 T 14-10-2018 Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 128 370 4.6E-102 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Atu0709 7edf5f12014fa1edd8db947dbbbcb924 388 SUPERFAMILY SSF117916 2 89 1.14E-17 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atu5271 538d8727d651f62bf973ca530c26664d 239 Gene3D G3DSA:1.10.10.10 1 63 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5271 538d8727d651f62bf973ca530c26664d 239 Pfam PF13280 WYL domain 138 215 7.0E-17 T 14-10-2018 IPR026881 WYL domain Atu5271 538d8727d651f62bf973ca530c26664d 239 Pfam PF08279 HTH domain 6 60 9.2E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Atu5271 538d8727d651f62bf973ca530c26664d 239 SUPERFAMILY SSF46785 1 63 9.7E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5116 1c2bf9d4b50bbefa73b410c516f801cb 103 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 10 94 3.4E-7 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 Atu1568 d5661edbbdb24055865075acf63766c7 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 1.6E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1568 d5661edbbdb24055865075acf63766c7 220 Gene3D G3DSA:1.10.357.10 11 220 2.4E-54 T 14-10-2018 Atu1568 d5661edbbdb24055865075acf63766c7 220 SUPERFAMILY SSF46689 8 83 6.62E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu1568 d5661edbbdb24055865075acf63766c7 220 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 62 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu1568 d5661edbbdb24055865075acf63766c7 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1568 d5661edbbdb24055865075acf63766c7 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu1568 d5661edbbdb24055865075acf63766c7 220 Pfam PF13972 Bacterial transcriptional repressor 84 211 2.8E-29 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 Gene3D G3DSA:2.40.37.10 21 371 5.8E-113 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 SUPERFAMILY SSF51419 20 246 9.16E-57 T 14-10-2018 IPR029066 PLP-binding barrel Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 300 317 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 38 54 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 136 148 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 262 277 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 354 367 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 279 294 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 208 235 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 74 92 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 PRINTS PR00992 Alanine racemase signature 170 181 4.9E-44 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 TIGRFAM TIGR00492 alr: alanine racemase 18 372 2.5E-74 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 SUPERFAMILY SSF50621 240 373 9.07E-43 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 43 53 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 Pfam PF00842 Alanine racemase, C-terminal domain 246 371 8.2E-36 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 SMART SM01005 246 372 8.3E-55 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 Pfam PF01168 Alanine racemase, N-terminal domain 20 235 1.9E-55 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 Gene3D G3DSA:3.20.20.10 22 233 5.8E-113 T 14-10-2018 IPR029066 PLP-binding barrel Atu3292 0bb44d4fa014f68ad0562b4f2c585aab 388 Hamap MF_01201 Alanine racemase. 13 372 30.365 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3891 cce3692048ce4027f555b1ea096bd24d 573 PIRSF PIRSF035859 1 573 2.5E-302 T 14-10-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 Atu3891 cce3692048ce4027f555b1ea096bd24d 573 SUPERFAMILY SSF53850 61 511 4.86E-51 T 14-10-2018 Atu3891 cce3692048ce4027f555b1ea096bd24d 573 Gene3D G3DSA:3.40.190.10 184 502 3.0E-42 T 14-10-2018 Atu3891 cce3692048ce4027f555b1ea096bd24d 573 Gene3D G3DSA:3.40.190.10 81 459 3.0E-42 T 14-10-2018 Atu3891 cce3692048ce4027f555b1ea096bd24d 573 Pfam PF13416 Bacterial extracellular solute-binding protein 83 420 4.9E-7 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3753 488c36ca8a2045cb628f3423e47c9744 67 Pfam PF04325 Protein of unknown function (DUF465) 13 58 2.7E-12 T 14-10-2018 IPR007420 Protein of unknown function DUF465 Atu3753 488c36ca8a2045cb628f3423e47c9744 67 Gene3D G3DSA:1.20.58.660 11 62 2.6E-6 T 14-10-2018 Atu0394 b6963993f4c5fdca579606683f38778b 430 SUPERFAMILY SSF53850 32 425 4.73E-65 T 14-10-2018 Atu0394 b6963993f4c5fdca579606683f38778b 430 Pfam PF13416 Bacterial extracellular solute-binding protein 48 373 2.5E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu0394 b6963993f4c5fdca579606683f38778b 430 Gene3D G3DSA:3.40.190.10 43 386 2.2E-80 T 14-10-2018 Atu0394 b6963993f4c5fdca579606683f38778b 430 Gene3D G3DSA:3.40.190.10 153 424 2.2E-80 T 14-10-2018 Atu0720 8d53ec04201afd335b184ffc06201f5d 217 SUPERFAMILY SSF53098 25 216 3.49E-64 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu0720 8d53ec04201afd335b184ffc06201f5d 217 Gene3D G3DSA:3.30.420.10 20 217 1.1E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu0720 8d53ec04201afd335b184ffc06201f5d 217 Pfam PF01351 Ribonuclease HII 37 212 9.0E-37 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain Atu0720 8d53ec04201afd335b184ffc06201f5d 217 Hamap MF_00052_B Ribonuclease HII [rnhB]. 35 214 35.367 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 SUPERFAMILY SSF49899 22 246 1.15E-51 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 PRINTS PR00737 Glycosyl hydrolase family 16 signature 168 185 2.5E-23 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 PRINTS PR00737 Glycosyl hydrolase family 16 signature 94 112 2.5E-23 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 PRINTS PR00737 Glycosyl hydrolase family 16 signature 113 129 2.5E-23 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 PRINTS PR00737 Glycosyl hydrolase family 16 signature 134 149 2.5E-23 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 PRINTS PR00737 Glycosyl hydrolase family 16 signature 150 163 2.5E-23 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 PRINTS PR00737 Glycosyl hydrolase family 16 signature 210 232 2.5E-23 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 Gene3D G3DSA:2.60.120.200 35 247 3.2E-52 T 14-10-2018 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 Pfam PF00722 Glycosyl hydrolases family 16 59 228 1.2E-42 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Atu4055 c10fc19252f62e2fbcbf5abdcb44a4b3 263 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 137 147 - T 14-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 Pfam PF13377 Periplasmic binding protein-like domain 177 323 2.5E-15 T 14-10-2018 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 SMART SM00354 8 78 1.2E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 SUPERFAMILY SSF53822 64 320 1.05E-32 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 SUPERFAMILY SSF47413 8 67 5.81E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 Gene3D G3DSA:3.40.50.2300 169 298 9.0E-83 T 14-10-2018 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 55 1.4E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 Gene3D G3DSA:3.40.50.2300 83 319 9.0E-83 T 14-10-2018 Atu1522 ff68ce13bc090bedfa3db7666454be1a 339 Gene3D G3DSA:1.10.260.40 3 65 2.7E-15 T 14-10-2018 Atu5137 95db3d8138701d7cdcd548f886438acd 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu5137 95db3d8138701d7cdcd548f886438acd 484 Gene3D G3DSA:3.40.309.10 262 451 1.1E-188 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu5137 95db3d8138701d7cdcd548f886438acd 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu5137 95db3d8138701d7cdcd548f886438acd 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 1.7E-222 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 Atu5137 95db3d8138701d7cdcd548f886438acd 484 SUPERFAMILY SSF53720 9 480 5.89E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu5137 95db3d8138701d7cdcd548f886438acd 484 Pfam PF00171 Aldehyde dehydrogenase family 20 478 7.0E-173 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu5137 95db3d8138701d7cdcd548f886438acd 484 Gene3D G3DSA:3.40.605.10 21 474 1.1E-188 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3413 3414a28c3cde33cc612d6df8b844a243 158 Gene3D G3DSA:1.10.10.10 1 54 5.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3413 3414a28c3cde33cc612d6df8b844a243 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.3E-20 T 14-10-2018 Atu3413 3414a28c3cde33cc612d6df8b844a243 158 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.6E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu3413 3414a28c3cde33cc612d6df8b844a243 158 Gene3D G3DSA:3.30.70.920 55 145 1.4E-19 T 14-10-2018 Atu3413 3414a28c3cde33cc612d6df8b844a243 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu3413 3414a28c3cde33cc612d6df8b844a243 158 SUPERFAMILY SSF46785 2 62 9.79E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3413 3414a28c3cde33cc612d6df8b844a243 158 SMART SM00344 3 112 1.6E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu3413 3414a28c3cde33cc612d6df8b844a243 158 SUPERFAMILY SSF54909 65 144 5.36E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3413 3414a28c3cde33cc612d6df8b844a243 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3413 3414a28c3cde33cc612d6df8b844a243 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3413 3414a28c3cde33cc612d6df8b844a243 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.4E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 Pfam PF00171 Aldehyde dehydrogenase family 8 277 2.7E-14 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 Gene3D G3DSA:3.40.605.10 13 407 6.5E-154 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 SUPERFAMILY SSF53720 4 412 9.56E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 319 341 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 PIRSF PIRSF000151 1 413 1.3E-166 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 412 39.321 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 Gene3D G3DSA:3.40.309.10 222 370 6.5E-154 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu2779 5e63ec7b4c02bbf90f12d95fe1d5b8b0 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 8 402 2.7E-133 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atu0287 3f2479b6fa2fb73264e282c270a09cd6 513 PIRSF PIRSF028099 15 513 1.6E-177 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Atu0287 3f2479b6fa2fb73264e282c270a09cd6 513 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 66 513 9.6E-136 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Atu0287 3f2479b6fa2fb73264e282c270a09cd6 513 Gene3D G3DSA:1.10.760.10 364 513 3.4E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu0287 3f2479b6fa2fb73264e282c270a09cd6 513 SUPERFAMILY SSF46626 373 513 4.01E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu5463 988bf5684852a5b639a84d70ef3c2bb8 327 Gene3D G3DSA:3.90.25.60 164 313 5.4E-133 T 14-10-2018 Atu5463 988bf5684852a5b639a84d70ef3c2bb8 327 Gene3D G3DSA:3.40.50.720 2 304 5.4E-133 T 14-10-2018 Atu5463 988bf5684852a5b639a84d70ef3c2bb8 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 253 3.0E-32 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu5463 988bf5684852a5b639a84d70ef3c2bb8 327 SUPERFAMILY SSF51735 2 320 1.22E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 Pfam PF01050 Mannose-6-phosphate isomerase 320 471 2.8E-60 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 Gene3D G3DSA:3.90.550.10 6 354 7.8E-106 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 Gene3D G3DSA:2.60.120.10 356 468 1.4E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 Pfam PF00483 Nucleotidyl transferase 10 290 7.9E-54 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 8 475 8.6E-210 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 SUPERFAMILY SSF51182 194 475 1.69E-71 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3353 56a0d151d4ceafedb1c0af327c30905a 476 SUPERFAMILY SSF53448 7 285 2.21E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 Gene3D G3DSA:1.10.1040.10 180 333 2.2E-59 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 334 1.7E-117 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 Gene3D G3DSA:3.40.50.720 1 179 4.7E-47 T 14-10-2018 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 58 87 1.4E-15 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 170 198 1.4E-15 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 1.4E-15 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 SUPERFAMILY SSF51735 1 154 4.71E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 SMART SM01350 181 333 8.4E-6 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 SUPERFAMILY SSF48179 179 329 4.15E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 152 1.3E-39 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 277 312 2.1E-4 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu4834 e24418e279d0c3ac56207c9aa2d80801 334 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 181 210 2.6E-9 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Atu0380 5c0df923f4594d67732d74091e870363 294 PIRSF PIRSF000728 7 294 5.1E-108 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu0380 5c0df923f4594d67732d74091e870363 294 SUPERFAMILY SSF53633 10 294 1.05E-91 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu0380 5c0df923f4594d67732d74091e870363 294 Hamap MF_00082 Acetylglutamate kinase [argB]. 25 288 49.161 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu0380 5c0df923f4594d67732d74091e870363 294 Gene3D G3DSA:3.40.1160.10 2 294 1.1E-95 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu0380 5c0df923f4594d67732d74091e870363 294 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 270 7.6E-78 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu0380 5c0df923f4594d67732d74091e870363 294 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 9.3E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu0380 5c0df923f4594d67732d74091e870363 294 PRINTS PR00474 Glutamate 5-kinase family signature 195 222 9.3E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu0380 5c0df923f4594d67732d74091e870363 294 PRINTS PR00474 Glutamate 5-kinase family signature 245 265 9.3E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu0380 5c0df923f4594d67732d74091e870363 294 Pfam PF00696 Amino acid kinase family 26 272 4.2E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atu4379 674258b81e477420344d51184b5aa812 131 Pfam PF00034 Cytochrome c 25 125 3.8E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 PRINTS PR00604 Class IA and IB cytochrome C signature 63 73 3.7E-19 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 PRINTS PR00604 Class IA and IB cytochrome C signature 99 109 3.7E-19 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 PRINTS PR00604 Class IA and IB cytochrome C signature 116 124 3.7E-19 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 PRINTS PR00604 Class IA and IB cytochrome C signature 47 62 3.7E-19 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 PRINTS PR00604 Class IA and IB cytochrome C signature 34 41 3.7E-19 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 PRINTS PR00604 Class IA and IB cytochrome C signature 80 96 3.7E-19 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 Gene3D G3DSA:1.10.760.10 5 124 2.7E-39 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu4379 674258b81e477420344d51184b5aa812 131 SUPERFAMILY SSF46626 22 125 1.62E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu3105 ea8dfcc29abd78c9f1355bf4c83328b9 309 Pfam PF12840 Helix-turn-helix domain 15 71 3.6E-10 T 14-10-2018 Atu3105 ea8dfcc29abd78c9f1355bf4c83328b9 309 Gene3D G3DSA:1.10.10.10 8 93 7.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3105 ea8dfcc29abd78c9f1355bf4c83328b9 309 PIRSF PIRSF030050 2 309 2.2E-145 T 14-10-2018 IPR016943 Uncharacterised conserved protein UCP030050, HTH transcriptional regulator, BH1869 Atu3105 ea8dfcc29abd78c9f1355bf4c83328b9 309 SMART SM00418 15 95 2.1E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3105 ea8dfcc29abd78c9f1355bf4c83328b9 309 SUPERFAMILY SSF46785 15 217 1.29E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1592 662ce9d861f35981155f975846f4ac81 231 Gene3D G3DSA:3.30.450.20 115 230 9.1E-7 T 14-10-2018 Atu3038 df11113720f21beef32bfefc7a504b67 548 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3038 df11113720f21beef32bfefc7a504b67 548 SUPERFAMILY SSF52540 283 516 1.95E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3038 df11113720f21beef32bfefc7a504b67 548 Pfam PF00005 ABC transporter 25 187 3.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3038 df11113720f21beef32bfefc7a504b67 548 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3038 df11113720f21beef32bfefc7a504b67 548 SMART SM00382 311 494 1.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3038 df11113720f21beef32bfefc7a504b67 548 SMART SM00382 34 238 9.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3038 df11113720f21beef32bfefc7a504b67 548 Gene3D G3DSA:3.40.50.300 282 546 1.8E-78 T 14-10-2018 Atu3038 df11113720f21beef32bfefc7a504b67 548 Gene3D G3DSA:3.40.50.300 3 281 1.1E-77 T 14-10-2018 Atu3038 df11113720f21beef32bfefc7a504b67 548 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 496 538 6.7E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3038 df11113720f21beef32bfefc7a504b67 548 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 268 0.0065 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3038 df11113720f21beef32bfefc7a504b67 548 Pfam PF00005 ABC transporter 303 445 6.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3038 df11113720f21beef32bfefc7a504b67 548 SUPERFAMILY SSF52540 3 268 1.11E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2703 bf96a78286bad4346b022a66e05b8efc 179 Pfam PF01245 Ribosomal protein L19 3 117 7.0E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 118 5.1E-47 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 119 30.757 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 PRINTS PR00061 Ribosomal protein L19 signature 39 68 4.6E-36 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 PRINTS PR00061 Ribosomal protein L19 signature 93 118 4.6E-36 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 PRINTS PR00061 Ribosomal protein L19 signature 9 38 4.6E-36 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 ProSitePatterns PS01015 Ribosomal protein L19 signature. 91 106 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 Gene3D G3DSA:2.30.30.790 2 122 1.2E-16 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2703 bf96a78286bad4346b022a66e05b8efc 179 SUPERFAMILY SSF50104 2 130 5.52E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 Pfam PF00289 Biotin carboxylase, N-terminal domain 16 123 1.3E-38 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 335 2.0E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 Gene3D G3DSA:3.30.470.20 101 445 1.9E-147 T 14-10-2018 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 SUPERFAMILY SSF56059 97 360 5.3E-64 T 14-10-2018 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 SUPERFAMILY SSF51246 345 458 2.2E-40 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 16 459 2.9E-189 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 Pfam PF02785 Biotin carboxylase C-terminal domain 350 455 4.2E-39 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 300 307 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 Gene3D G3DSA:3.40.50.20 15 99 5.1E-29 T 14-10-2018 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 168 182 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 Gene3D G3DSA:3.30.1490.20 145 217 1.9E-147 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 SMART SM00878 350 455 2.7E-57 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu4273 6b50a42ccdc40b41e6e72e19181f7f70 464 SUPERFAMILY SSF52440 8 127 2.45E-42 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu3157 3e26a1f6cecc7004b40bc75e199902f0 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 154 5.0E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu3128 f71a98cb04c835a645f436531e001a2c 365 Gene3D G3DSA:1.50.10.10 3 360 7.5E-108 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu3128 f71a98cb04c835a645f436531e001a2c 365 Pfam PF07470 Glycosyl Hydrolase Family 88 18 361 4.6E-72 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 Atu3128 f71a98cb04c835a645f436531e001a2c 365 SUPERFAMILY SSF48208 5 359 4.14E-61 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu2797 f56b7875eaa3d06ff3526b3bf22e6a6d 145 Gene3D G3DSA:3.30.420.180 1 130 7.1E-43 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Atu2797 f56b7875eaa3d06ff3526b3bf22e6a6d 145 Pfam PF01890 Cobalamin synthesis G C-terminus 10 126 9.8E-23 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Atu2797 f56b7875eaa3d06ff3526b3bf22e6a6d 145 SUPERFAMILY SSF159664 9 127 3.92E-30 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Atu5011 fa9738b37a1e8b2dc35ac23f5ba9ff04 213 Pfam PF01323 DSBA-like thioredoxin domain 3 203 4.0E-25 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Atu5011 fa9738b37a1e8b2dc35ac23f5ba9ff04 213 Gene3D G3DSA:3.40.30.10 1 207 1.2E-45 T 14-10-2018 Atu5011 fa9738b37a1e8b2dc35ac23f5ba9ff04 213 SUPERFAMILY SSF52833 2 207 1.68E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3810 6faad82123240ad39be5e21193c32880 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3810 6faad82123240ad39be5e21193c32880 297 Pfam PF03466 LysR substrate binding domain 86 286 2.2E-41 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3810 6faad82123240ad39be5e21193c32880 297 Gene3D G3DSA:1.10.10.10 1 86 3.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3810 6faad82123240ad39be5e21193c32880 297 SUPERFAMILY SSF46785 1 110 3.86E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3810 6faad82123240ad39be5e21193c32880 297 SUPERFAMILY SSF53850 87 289 4.34E-45 T 14-10-2018 Atu3810 6faad82123240ad39be5e21193c32880 297 Gene3D G3DSA:3.40.190.290 89 287 1.9E-60 T 14-10-2018 Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 Gene3D G3DSA:3.40.50.720 3 249 3.8E-50 T 14-10-2018 Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.8E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 181 8.1E-4 T 14-10-2018 Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 SUPERFAMILY SSF51735 1 217 1.92E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu0864 1b56685ecbd7dad7ac41245c49a7505c 252 Pfam PF00106 short chain dehydrogenase 6 192 1.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 Gene3D G3DSA:3.30.310.50 5 98 1.5E-6 T 14-10-2018 Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 Gene3D G3DSA:3.40.50.80 229 358 2.1E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 SUPERFAMILY SSF63380 109 227 7.88E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 11 95 8.6E-15 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 Pfam PF08021 Siderophore-interacting FAD-binding domain 112 228 2.5E-29 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 Gene3D G3DSA:2.40.30.10 99 228 6.3E-25 T 14-10-2018 Atu2454 26318fa1d62ba0bd791e39c8e63d91f9 358 Pfam PF04954 Siderophore-interacting protein 232 353 3.9E-27 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Atu1127 9e816da59e481707ee19971977ab9561 84 Gene3D G3DSA:3.10.20.30 1 84 1.4E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu1127 9e816da59e481707ee19971977ab9561 84 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 84 3.7E-28 T 14-10-2018 Atu1127 9e816da59e481707ee19971977ab9561 84 Pfam PF02597 ThiS family 4 84 4.5E-17 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Atu1127 9e816da59e481707ee19971977ab9561 84 SUPERFAMILY SSF54285 1 84 1.31E-18 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Atu0679 89a9f591c3663b14c53f4514c18a4048 230 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 164 185 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Atu0679 89a9f591c3663b14c53f4514c18a4048 230 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 206 8.6E-52 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Atu0679 89a9f591c3663b14c53f4514c18a4048 230 SUPERFAMILY SSF53850 1 223 1.35E-50 T 14-10-2018 Atu0679 89a9f591c3663b14c53f4514c18a4048 230 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 228 46.066 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Atu0679 89a9f591c3663b14c53f4514c18a4048 230 Gene3D G3DSA:3.40.190.10 3 229 4.7E-56 T 14-10-2018 Atu0679 89a9f591c3663b14c53f4514c18a4048 230 Pfam PF01634 ATP phosphoribosyltransferase 53 227 1.8E-40 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Atu0679 89a9f591c3663b14c53f4514c18a4048 230 Gene3D G3DSA:3.40.190.10 96 202 4.7E-56 T 14-10-2018 Atu1377 cbe6d2c27f66aa0386aef067524c4ef5 185 Gene3D G3DSA:1.10.132.20 12 182 2.3E-65 T 14-10-2018 Atu1377 cbe6d2c27f66aa0386aef067524c4ef5 185 SUPERFAMILY SSF55194 3 185 3.14E-69 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Atu1377 cbe6d2c27f66aa0386aef067524c4ef5 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.6E-63 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Atu1377 cbe6d2c27f66aa0386aef067524c4ef5 185 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-65 T 14-10-2018 Atu1377 cbe6d2c27f66aa0386aef067524c4ef5 185 Pfam PF01765 Ribosome recycling factor 20 183 8.6E-60 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Atu1377 cbe6d2c27f66aa0386aef067524c4ef5 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.853 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Atu3578 24a5dec18486186c74c6252a35262af5 515 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 389 501 1.6E-11 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 Gene3D G3DSA:3.50.50.60 9 374 6.4E-134 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3578 24a5dec18486186c74c6252a35262af5 515 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 360 370 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 SUPERFAMILY SSF51905 7 382 2.96E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3578 24a5dec18486186c74c6252a35262af5 515 Gene3D G3DSA:1.10.8.870 402 469 4.1E-22 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 Pfam PF01266 FAD dependent oxidoreductase 9 337 7.7E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3578 24a5dec18486186c74c6252a35262af5 515 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 13 30 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 SUPERFAMILY SSF54373 234 327 4.32E-6 T 14-10-2018 Atu3578 24a5dec18486186c74c6252a35262af5 515 Gene3D G3DSA:3.30.9.10 86 328 6.4E-134 T 14-10-2018 Atu3578 24a5dec18486186c74c6252a35262af5 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 37 49 8.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 8.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 8 20 8.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 355 367 8.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 21 31 8.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3578 24a5dec18486186c74c6252a35262af5 515 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 8.8E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu0739 f5e81a1fb469ea7089bf0f9008ad4171 320 Pfam PF07670 Nucleoside recognition 180 274 3.9E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 Gene3D G3DSA:2.40.50.100 74 219 7.3E-98 T 14-10-2018 Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 SUPERFAMILY SSF111369 64 309 2.88E-64 T 14-10-2018 Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 Gene3D G3DSA:1.10.287.470 109 182 7.3E-98 T 14-10-2018 Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 Gene3D G3DSA:2.40.30.170 63 315 7.3E-98 T 14-10-2018 Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 386 1.7E-88 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 Pfam PF13533 Biotin-lipoyl like 76 123 2.0E-13 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Atu2482 4e9ac1a7b544371db0e58635a9ec1b7d 396 Gene3D G3DSA:2.40.420.20 316 383 7.3E-98 T 14-10-2018 Atu3430 58ecc61c7bf63c4a3540edae62b9631b 356 Gene3D G3DSA:3.20.20.30 4 356 2.8E-91 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3430 58ecc61c7bf63c4a3540edae62b9631b 356 Pfam PF00296 Luciferase-like monooxygenase 7 331 2.7E-69 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3430 58ecc61c7bf63c4a3540edae62b9631b 356 SUPERFAMILY SSF51679 6 355 2.62E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3730 6f7cf0cefdf1ff0f81662eaba289ace1 274 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 261 5.9E-79 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Atu3730 6f7cf0cefdf1ff0f81662eaba289ace1 274 Pfam PF13277 YmdB-like protein 4 258 1.4E-100 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Atu3730 6f7cf0cefdf1ff0f81662eaba289ace1 274 SUPERFAMILY SSF56300 1 261 7.59E-82 T 14-10-2018 Atu3730 6f7cf0cefdf1ff0f81662eaba289ace1 274 PIRSF PIRSF004789 1 266 1.6E-86 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Atu3730 6f7cf0cefdf1ff0f81662eaba289ace1 274 Gene3D G3DSA:3.60.21.10 1 268 2.2E-101 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu0521 06987dddee615189cdbe90a5b9653f8d 181 Pfam PF03975 CheD chemotactic sensory transduction 53 148 1.6E-26 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Atu0521 06987dddee615189cdbe90a5b9653f8d 181 Gene3D G3DSA:3.30.1330.200 6 162 5.3E-49 T 14-10-2018 IPR038592 CheD-like superfamily Atu0521 06987dddee615189cdbe90a5b9653f8d 181 SUPERFAMILY SSF64438 8 153 1.37E-48 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Atu0521 06987dddee615189cdbe90a5b9653f8d 181 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 155 27.983 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 SMART SM00481 7 74 7.4E-12 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 Pfam PF02811 PHP domain 8 124 1.1E-13 T 14-10-2018 IPR004013 PHP domain GO:0003824 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 Pfam PF14579 Helix-hairpin-helix motif 771 868 3.9E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 991 8.8E-165 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 SUPERFAMILY SSF89550 13 246 8.63E-10 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 Gene3D G3DSA:3.20.20.140 1 252 8.8E-65 T 14-10-2018 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 Pfam PF01336 OB-fold nucleic acid binding domain 963 1031 1.4E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 6 1091 13.444 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu3228 496f41f2c456eb2e8f1e9e6f9b7e559a 1091 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 275 698 7.6E-145 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu2582 7febe8554354672e9d058beef7ddd76b 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 195 285 1.1E-29 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu2582 7febe8554354672e9d058beef7ddd76b 424 SMART SM00984 313 413 6.1E-30 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu2582 7febe8554354672e9d058beef7ddd76b 424 PIRSF PIRSF500136 1 424 3.8E-143 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Atu2582 7febe8554354672e9d058beef7ddd76b 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 412 4.5E-19 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu2582 7febe8554354672e9d058beef7ddd76b 424 SUPERFAMILY SSF52413 302 416 2.22E-25 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Atu2582 7febe8554354672e9d058beef7ddd76b 424 SUPERFAMILY SSF48179 195 286 9.35E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2582 7febe8554354672e9d058beef7ddd76b 424 Gene3D G3DSA:3.40.50.720 193 423 4.8E-62 T 14-10-2018 Atu2582 7febe8554354672e9d058beef7ddd76b 424 Gene3D G3DSA:3.40.50.720 1 191 2.8E-62 T 14-10-2018 Atu2582 7febe8554354672e9d058beef7ddd76b 424 PIRSF PIRSF000124 1 423 3.8E-62 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Atu2582 7febe8554354672e9d058beef7ddd76b 424 SUPERFAMILY SSF51735 1 188 3.58E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2582 7febe8554354672e9d058beef7ddd76b 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 172 8.9E-44 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu2582 7febe8554354672e9d058beef7ddd76b 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 409 2.5E-126 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Atu3699 ee8045d9f19bf5706059cf762183e442 169 SUPERFAMILY SSF55826 7 168 4.06E-47 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atu3699 ee8045d9f19bf5706059cf762183e442 169 Pfam PF04073 Aminoacyl-tRNA editing domain 28 154 2.2E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Atu3699 ee8045d9f19bf5706059cf762183e442 169 Gene3D G3DSA:3.90.960.10 5 169 4.1E-51 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atu2467 00585a451aa7b7c7900d831a76cabb63 359 Gene3D G3DSA:3.40.190.10 39 340 2.8E-133 T 14-10-2018 Atu2467 00585a451aa7b7c7900d831a76cabb63 359 SUPERFAMILY SSF53850 39 355 2.66E-44 T 14-10-2018 Atu2467 00585a451aa7b7c7900d831a76cabb63 359 Gene3D G3DSA:3.40.190.10 138 353 2.8E-133 T 14-10-2018 Atu2467 00585a451aa7b7c7900d831a76cabb63 359 Pfam PF13416 Bacterial extracellular solute-binding protein 54 313 3.2E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4755 1a15909c334d15ea90b7f9edea6c2886 283 SUPERFAMILY SSF53850 30 263 1.47E-40 T 14-10-2018 Atu4755 1a15909c334d15ea90b7f9edea6c2886 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 262 5.8E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4755 1a15909c334d15ea90b7f9edea6c2886 283 SMART SM00062 34 265 5.7E-39 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4755 1a15909c334d15ea90b7f9edea6c2886 283 Gene3D G3DSA:3.40.190.10 41 259 6.8E-61 T 14-10-2018 Atu4755 1a15909c334d15ea90b7f9edea6c2886 283 TIGRFAM TIGR02995 ectoine_ehuB: ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB 3 280 1.4E-138 T 14-10-2018 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB GO:0033294|GO:0051470 Atu4755 1a15909c334d15ea90b7f9edea6c2886 283 Gene3D G3DSA:3.40.190.10 120 224 6.8E-61 T 14-10-2018 Atu1082 6b1de2f5b400fe53ff4d72ce8d0b1ccc 234 Pfam PF03591 AzlC protein 19 158 2.6E-38 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease Atu1215 9cf054e994957f0a51614f75bae009fc 473 Pfam PF00581 Rhodanese-like domain 167 271 2.0E-8 T 14-10-2018 IPR001763 Rhodanese-like domain Atu1215 9cf054e994957f0a51614f75bae009fc 473 Pfam PF00581 Rhodanese-like domain 11 130 3.6E-15 T 14-10-2018 IPR001763 Rhodanese-like domain Atu1215 9cf054e994957f0a51614f75bae009fc 473 Gene3D G3DSA:3.40.630.30 331 467 3.4E-14 T 14-10-2018 Atu1215 9cf054e994957f0a51614f75bae009fc 473 Gene3D G3DSA:3.40.250.10 166 284 6.7E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu1215 9cf054e994957f0a51614f75bae009fc 473 Gene3D G3DSA:3.40.250.10 2 152 1.4E-49 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu1215 9cf054e994957f0a51614f75bae009fc 473 SUPERFAMILY SSF55729 334 458 8.95E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1215 9cf054e994957f0a51614f75bae009fc 473 SMART SM00450 10 134 5.1E-22 T 14-10-2018 IPR001763 Rhodanese-like domain Atu1215 9cf054e994957f0a51614f75bae009fc 473 SMART SM00450 157 277 1.9E-13 T 14-10-2018 IPR001763 Rhodanese-like domain Atu1215 9cf054e994957f0a51614f75bae009fc 473 SUPERFAMILY SSF52821 8 154 6.81E-46 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu1215 9cf054e994957f0a51614f75bae009fc 473 SUPERFAMILY SSF52821 162 286 1.7E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Atu1215 9cf054e994957f0a51614f75bae009fc 473 ProSitePatterns PS00380 Rhodanese signature 1. 44 55 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Atu1895 74c0339953923266e223757066967d0b 213 SUPERFAMILY SSF55821 2 199 5.95E-83 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atu1895 74c0339953923266e223757066967d0b 213 Gene3D G3DSA:3.90.870.10 1 204 3.6E-90 T 14-10-2018 Atu1895 74c0339953923266e223757066967d0b 213 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 1.3E-74 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1895 74c0339953923266e223757066967d0b 213 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.6E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1895 74c0339953923266e223757066967d0b 213 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 41.471 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu5303 c7f059435426a8ad4ca471a45b683184 281 SUPERFAMILY SSF46785 2 111 3.04E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5303 c7f059435426a8ad4ca471a45b683184 281 Pfam PF03466 LysR substrate binding domain 88 239 3.2E-22 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5303 c7f059435426a8ad4ca471a45b683184 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5303 c7f059435426a8ad4ca471a45b683184 281 Gene3D G3DSA:1.10.10.10 2 90 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5303 c7f059435426a8ad4ca471a45b683184 281 Gene3D G3DSA:3.40.190.10 160 252 1.3E-36 T 14-10-2018 Atu5303 c7f059435426a8ad4ca471a45b683184 281 Gene3D G3DSA:3.40.190.10 95 255 1.3E-36 T 14-10-2018 Atu5303 c7f059435426a8ad4ca471a45b683184 281 SUPERFAMILY SSF53850 83 278 1.24E-23 T 14-10-2018 Atu4533 a11db638a1d6b8005c8362f9d4f3b104 253 PIRSF PIRSF039085 8 251 3.2E-108 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu4533 a11db638a1d6b8005c8362f9d4f3b104 253 SUPERFAMILY SSF52540 11 245 6.08E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4533 a11db638a1d6b8005c8362f9d4f3b104 253 Gene3D G3DSA:3.40.50.300 9 251 2.8E-78 T 14-10-2018 Atu4533 a11db638a1d6b8005c8362f9d4f3b104 253 SMART SM00382 36 223 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4533 a11db638a1d6b8005c8362f9d4f3b104 253 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4533 a11db638a1d6b8005c8362f9d4f3b104 253 Pfam PF00005 ABC transporter 27 175 1.6E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2604 40cb21570957ad3cb9f0506174595b98 393 SUPERFAMILY SSF51735 2 151 2.99E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2604 40cb21570957ad3cb9f0506174595b98 393 Gene3D G3DSA:3.40.50.720 1 122 4.8E-19 T 14-10-2018 Atu2604 40cb21570957ad3cb9f0506174595b98 393 SUPERFAMILY SSF55347 128 302 5.45E-25 T 14-10-2018 Atu2604 40cb21570957ad3cb9f0506174595b98 393 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 117 1.1E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu2604 40cb21570957ad3cb9f0506174595b98 393 Gene3D G3DSA:3.30.360.10 123 370 1.8E-31 T 14-10-2018 Atu2604 40cb21570957ad3cb9f0506174595b98 393 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 140 204 2.8E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu5253 ac5062ac31d9d8317b807bd5b191d779 519 PIRSF PIRSF002741 17 510 3.9E-86 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu5253 ac5062ac31d9d8317b807bd5b191d779 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 432 4.8E-80 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu5253 ac5062ac31d9d8317b807bd5b191d779 519 Gene3D G3DSA:3.40.190.10 30 268 1.0E-117 T 14-10-2018 Atu5253 ac5062ac31d9d8317b807bd5b191d779 519 Gene3D G3DSA:3.10.105.10 269 500 1.0E-117 T 14-10-2018 Atu5253 ac5062ac31d9d8317b807bd5b191d779 519 Gene3D G3DSA:3.90.76.10 56 167 1.0E-117 T 14-10-2018 Atu5253 ac5062ac31d9d8317b807bd5b191d779 519 SUPERFAMILY SSF53850 24 502 9.95E-116 T 14-10-2018 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 558 709 5.2E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 SMART SM00304 360 413 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 SMART SM00304 441 493 1.4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 SUPERFAMILY SSF58104 392 742 8.24E-63 T 14-10-2018 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 Gene3D G3DSA:1.10.287.950 440 743 1.8E-72 T 14-10-2018 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 Gene3D G3DSA:1.20.1480.50 322 419 4.6E-14 T 14-10-2018 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 669 698 1.4E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 592 619 1.4E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 515 544 1.4E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 621 650 1.4E-39 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu2223 4cf7e7d5d939dcb90f98011a983655e1 754 SMART SM00283 494 741 7.1E-83 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0823 c01bfdb101481588193373474b63572c 346 Pfam PF12857 TOBE-like domain 282 338 2.9E-7 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 Atu0823 c01bfdb101481588193373474b63572c 346 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0823 c01bfdb101481588193373474b63572c 346 Pfam PF00005 ABC transporter 18 164 3.1E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0823 c01bfdb101481588193373474b63572c 346 SUPERFAMILY SSF52540 3 245 1.94E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0823 c01bfdb101481588193373474b63572c 346 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 4 242 4.4E-116 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 Atu0823 c01bfdb101481588193373474b63572c 346 SMART SM00382 27 214 6.8E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0823 c01bfdb101481588193373474b63572c 346 Gene3D G3DSA:3.40.50.300 3 253 3.7E-80 T 14-10-2018 Atu4787 f4241224aa5dc784967af950512f92fd 269 Gene3D G3DSA:3.30.540.10 2 147 1.9E-44 T 14-10-2018 Atu4787 f4241224aa5dc784967af950512f92fd 269 Pfam PF00459 Inositol monophosphatase family 11 252 4.2E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4787 f4241224aa5dc784967af950512f92fd 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu4787 f4241224aa5dc784967af950512f92fd 269 SUPERFAMILY SSF56655 8 267 4.06E-69 T 14-10-2018 Atu4787 f4241224aa5dc784967af950512f92fd 269 Gene3D G3DSA:3.40.190.80 151 268 5.5E-21 T 14-10-2018 Atu4787 f4241224aa5dc784967af950512f92fd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 46 66 3.4E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4787 f4241224aa5dc784967af950512f92fd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 3.4E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4787 f4241224aa5dc784967af950512f92fd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 3.4E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4787 f4241224aa5dc784967af950512f92fd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 3.4E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4787 f4241224aa5dc784967af950512f92fd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 68 84 3.4E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4787 f4241224aa5dc784967af950512f92fd 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 3.4E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu2006 3693e70dcc0fe217001225afd6b15f58 200 Pfam PF00226 DnaJ domain 3 61 5.1E-16 T 14-10-2018 IPR001623 DnaJ domain Atu2006 3693e70dcc0fe217001225afd6b15f58 200 SMART SM00271 2 56 2.5E-16 T 14-10-2018 IPR001623 DnaJ domain Atu2006 3693e70dcc0fe217001225afd6b15f58 200 PRINTS PR00625 DnaJ domain signature 23 38 2.6E-6 T 14-10-2018 IPR001623 DnaJ domain Atu2006 3693e70dcc0fe217001225afd6b15f58 200 PRINTS PR00625 DnaJ domain signature 5 23 2.6E-6 T 14-10-2018 IPR001623 DnaJ domain Atu2006 3693e70dcc0fe217001225afd6b15f58 200 ProSitePatterns PS00636 Nt-dnaJ domain signature. 41 60 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Atu2006 3693e70dcc0fe217001225afd6b15f58 200 Gene3D G3DSA:1.10.287.110 2 83 1.2E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu2006 3693e70dcc0fe217001225afd6b15f58 200 SUPERFAMILY SSF46565 2 67 3.66E-22 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu3016 f6fd5845fd145bd449f53b4f49d86e34 99 SUPERFAMILY SSF53254 4 75 4.32E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu3016 f6fd5845fd145bd449f53b4f49d86e34 99 Gene3D G3DSA:3.40.50.1240 3 93 4.2E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu3016 f6fd5845fd145bd449f53b4f49d86e34 99 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Atu3016 f6fd5845fd145bd449f53b4f49d86e34 99 PIRSF PIRSF000709 2 90 8.6E-9 T 14-10-2018 Atu3016 f6fd5845fd145bd449f53b4f49d86e34 99 SMART SM00855 5 87 5.3E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu3016 f6fd5845fd145bd449f53b4f49d86e34 99 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 78 9.7E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu4337 b01dda0a91ff288c20c5f63dac58af88 593 Pfam PF05947 Type VI secretion system, TssF 7 592 4.2E-191 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like Atu4337 b01dda0a91ff288c20c5f63dac58af88 593 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 593 4.1E-198 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like Atu4337 b01dda0a91ff288c20c5f63dac58af88 593 PIRSF PIRSF028304 1 592 3.7E-193 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 Pfam PF01979 Amidohydrolase family 47 358 2.6E-9 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 SUPERFAMILY SSF51556 50 343 2.27E-17 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 Gene3D G3DSA:2.30.40.10 313 378 6.9E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 Gene3D G3DSA:3.20.20.140 51 168 4.1E-11 T 14-10-2018 Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 PIRSF PIRSF038971 2 378 1.4E-142 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 Gene3D G3DSA:2.30.40.10 7 50 4.1E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 377 1.9E-165 T 14-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0169 c74c8fc7c9cede8af4dfb3beae9e6e10 378 SUPERFAMILY SSF51338 3 377 3.38E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2776 b250c032dd61a7ead48ca5c408499217 160 PIRSF PIRSF004505 1 159 3.3E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Atu2776 b250c032dd61a7ead48ca5c408499217 160 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 27.66 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Atu2776 b250c032dd61a7ead48ca5c408499217 160 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 1.1E-44 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Atu2776 b250c032dd61a7ead48ca5c408499217 160 SUPERFAMILY SSF75217 1 157 1.83E-46 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu2776 b250c032dd61a7ead48ca5c408499217 160 Gene3D G3DSA:3.40.1280.10 1 159 1.9E-47 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 Gene3D G3DSA:3.40.190.10 91 290 5.4E-65 T 14-10-2018 Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 SUPERFAMILY SSF46785 1 109 1.1E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 Gene3D G3DSA:3.40.190.10 163 268 5.4E-65 T 14-10-2018 Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 Gene3D G3DSA:1.10.10.10 1 90 1.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 Pfam PF03466 LysR substrate binding domain 88 291 7.4E-33 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3827 0d8d4090e1ccd1a714dfbe7ea12a32c4 295 SUPERFAMILY SSF53850 89 292 3.08E-33 T 14-10-2018 Atu3387 0cd663713b0af2988417d3da67eb7708 166 SUPERFAMILY SSF88946 13 88 1.8E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Atu3387 0cd663713b0af2988417d3da67eb7708 166 Pfam PF08281 Sigma-70, region 4 110 152 5.6E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Atu3387 0cd663713b0af2988417d3da67eb7708 166 Gene3D G3DSA:1.10.1740.10 4 78 5.7E-13 T 14-10-2018 Atu3387 0cd663713b0af2988417d3da67eb7708 166 Gene3D G3DSA:1.10.10.10 92 166 9.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3387 0cd663713b0af2988417d3da67eb7708 166 Pfam PF04542 Sigma-70 region 2 13 76 1.8E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Atu3387 0cd663713b0af2988417d3da67eb7708 166 SUPERFAMILY SSF88659 97 162 2.43E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu3387 0cd663713b0af2988417d3da67eb7708 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 159 2.0E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Atu0317 8d9d1dbc58ee0fdc0c970b70b79c291f 124 Pfam PF04237 YjbR 16 101 4.4E-16 T 14-10-2018 IPR007351 Uncharacterised protein YjbR Atu0317 8d9d1dbc58ee0fdc0c970b70b79c291f 124 Gene3D G3DSA:3.90.1150.30 5 121 4.5E-18 T 14-10-2018 IPR038056 YjbR-like superfamily Atu0317 8d9d1dbc58ee0fdc0c970b70b79c291f 124 SUPERFAMILY SSF142906 4 117 5.36E-28 T 14-10-2018 IPR038056 YjbR-like superfamily Atu3731 f715bf142ac5644fcf49044f8a13a914 195 SUPERFAMILY SSF100950 7 192 4.33E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu3731 f715bf142ac5644fcf49044f8a13a914 195 Gene3D G3DSA:3.40.50.10420 6 195 1.7E-43 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Atu3731 f715bf142ac5644fcf49044f8a13a914 195 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 185 8.8E-47 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Atu3731 f715bf142ac5644fcf49044f8a13a914 195 PIRSF PIRSF006806 5 187 1.2E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Atu3731 f715bf142ac5644fcf49044f8a13a914 195 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 185 1.8E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Atu4800 1659823b281f019dc10727ab86bb7167 447 Gene3D G3DSA:3.40.630.10 28 348 2.7E-125 T 14-10-2018 Atu4800 1659823b281f019dc10727ab86bb7167 447 Gene3D G3DSA:3.50.30.90 73 169 2.7E-125 T 14-10-2018 Atu4800 1659823b281f019dc10727ab86bb7167 447 Pfam PF09940 Domain of unknown function (DUF2172) 75 166 2.5E-36 T 14-10-2018 IPR032610 Domain of unknown function DUF2172 Atu4800 1659823b281f019dc10727ab86bb7167 447 Pfam PF16221 winged helix-turn-helix 365 440 4.8E-29 T 14-10-2018 IPR032622 UCP01524, winged helix-turn-helix domain Atu4800 1659823b281f019dc10727ab86bb7167 447 Gene3D G3DSA:1.10.10.10 364 441 1.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4800 1659823b281f019dc10727ab86bb7167 447 Pfam PF16254 Domain of unknown function (DUF4910) 25 363 6.2E-109 T 14-10-2018 IPR032589 Domain of unknown function DUF4910 Atu4800 1659823b281f019dc10727ab86bb7167 447 SUPERFAMILY SSF53187 99 367 8.97E-36 T 14-10-2018 Atu4800 1659823b281f019dc10727ab86bb7167 447 PIRSF PIRSF015244 1 442 6.1E-232 T 14-10-2018 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like Atu5473 7f2d648835728cbb85444591752e5c73 290 SUPERFAMILY SSF56752 9 283 3.14E-74 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Atu5473 7f2d648835728cbb85444591752e5c73 290 Pfam PF01063 Amino-transferase class IV 37 260 2.2E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Atu5473 7f2d648835728cbb85444591752e5c73 290 ProSitePatterns PS00770 Aminotransferases class-IV signature. 185 215 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Atu5473 7f2d648835728cbb85444591752e5c73 290 Gene3D G3DSA:3.30.470.10 1 124 1.2E-30 T 14-10-2018 Atu5473 7f2d648835728cbb85444591752e5c73 290 Gene3D G3DSA:3.20.10.10 129 287 1.6E-48 T 14-10-2018 Atu1397 9519dc8376787b119da4416adbb7cca1 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 209 8.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1397 9519dc8376787b119da4416adbb7cca1 217 Gene3D G3DSA:1.10.3720.10 8 213 1.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu1397 9519dc8376787b119da4416adbb7cca1 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 9.3E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1397 9519dc8376787b119da4416adbb7cca1 217 SUPERFAMILY SSF161098 12 205 1.83E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu3206 3486554c736fd89188d336df89c6cf60 347 Gene3D G3DSA:3.40.50.150 142 311 5.9E-12 T 14-10-2018 Atu3206 3486554c736fd89188d336df89c6cf60 347 SUPERFAMILY SSF53335 178 304 9.09E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3312 0661a7ff167f73397740b5d45f622999 320 Pfam PF02156 Glycosyl hydrolase family 26 125 230 7.6E-5 T 14-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 Atu3312 0661a7ff167f73397740b5d45f622999 320 SUPERFAMILY SSF51445 56 317 1.62E-51 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu3312 0661a7ff167f73397740b5d45f622999 320 Gene3D G3DSA:3.20.20.80 53 320 2.5E-37 T 14-10-2018 Atu2732 84e62c4ef6eac971811947dfbcb26571 379 Gene3D G3DSA:3.40.630.10 5 361 8.3E-144 T 14-10-2018 Atu2732 84e62c4ef6eac971811947dfbcb26571 379 Pfam PF07687 Peptidase dimerisation domain 175 273 6.4E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu2732 84e62c4ef6eac971811947dfbcb26571 379 Gene3D G3DSA:3.30.70.360 171 285 8.3E-144 T 14-10-2018 Atu2732 84e62c4ef6eac971811947dfbcb26571 379 Pfam PF01546 Peptidase family M20/M25/M40 63 373 4.9E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu2732 84e62c4ef6eac971811947dfbcb26571 379 SUPERFAMILY SSF53187 2 377 2.75E-90 T 14-10-2018 Atu2732 84e62c4ef6eac971811947dfbcb26571 379 SUPERFAMILY SSF55031 174 281 1.06E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu2732 84e62c4ef6eac971811947dfbcb26571 379 PIRSF PIRSF005962 1 379 3.1E-133 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu2732 84e62c4ef6eac971811947dfbcb26571 379 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 5 364 1.7E-116 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu2169 969848872de4f4817f1706571bedddf7 150 Gene3D G3DSA:1.10.10.410 94 149 3.5E-11 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Atu2169 969848872de4f4817f1706571bedddf7 150 Gene3D G3DSA:1.10.1510.10 1 93 5.1E-24 T 14-10-2018 Atu2169 969848872de4f4817f1706571bedddf7 150 SUPERFAMILY SSF89095 2 149 3.35E-37 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Atu2169 969848872de4f4817f1706571bedddf7 150 Pfam PF09424 Yqey-like protein 4 149 4.6E-50 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Atu4827 28f73d754162c1532c3ac07df94d69f4 625 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 214 619 1.8E-101 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu4827 28f73d754162c1532c3ac07df94d69f4 625 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 44 171 6.4E-25 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu4827 28f73d754162c1532c3ac07df94d69f4 625 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 221 624 1.1E-81 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu4749 17bc19a1f90436eb6ff3fa680a2a92bd 220 SUPERFAMILY SSF52540 21 212 1.53E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4749 17bc19a1f90436eb6ff3fa680a2a92bd 220 Gene3D G3DSA:3.40.50.300 11 213 2.6E-55 T 14-10-2018 Atu4749 17bc19a1f90436eb6ff3fa680a2a92bd 220 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 28 165 1.7E-8 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Atu1383 44f776881baf89d144bb083290934f4c 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 12 151 33.533 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu1383 44f776881baf89d144bb083290934f4c 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 13 148 2.9E-58 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu1383 44f776881baf89d144bb083290934f4c 154 Gene3D G3DSA:3.10.129.10 4 154 2.3E-64 T 14-10-2018 Atu1383 44f776881baf89d144bb083290934f4c 154 SUPERFAMILY SSF54637 16 153 3.44E-48 T 14-10-2018 IPR029069 HotDog domain superfamily Atu1383 44f776881baf89d144bb083290934f4c 154 Pfam PF07977 FabA-like domain 21 143 1.2E-36 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu3598 db8d88c38e261f0acd609df9b0c317a2 222 Pfam PF08534 Redoxin 91 214 1.9E-15 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atu3598 db8d88c38e261f0acd609df9b0c317a2 222 Gene3D G3DSA:3.40.30.10 49 222 1.5E-38 T 14-10-2018 Atu3598 db8d88c38e261f0acd609df9b0c317a2 222 SUPERFAMILY SSF52833 80 216 5.8E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu3598 db8d88c38e261f0acd609df9b0c317a2 222 ProSitePatterns PS00194 Thioredoxin family active site. 105 123 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Atu0005 cd2ce327c6b0151ba84e763ad7fcb46e 232 Gene3D G3DSA:3.30.420.10 2 173 4.2E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu0005 cd2ce327c6b0151ba84e763ad7fcb46e 232 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 173 3.8E-52 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0005 cd2ce327c6b0151ba84e763ad7fcb46e 232 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 228 3.7E-70 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu0005 cd2ce327c6b0151ba84e763ad7fcb46e 232 Pfam PF00929 Exonuclease 4 163 6.3E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu0005 cd2ce327c6b0151ba84e763ad7fcb46e 232 SUPERFAMILY SSF53098 1 169 6.15E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu0005 cd2ce327c6b0151ba84e763ad7fcb46e 232 SMART SM00479 2 172 5.2E-46 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu1999 313e2602ccd8214e9742146aaa55e0ef 203 Gene3D G3DSA:3.40.50.720 3 202 1.6E-51 T 14-10-2018 Atu1999 313e2602ccd8214e9742146aaa55e0ef 203 Pfam PF13460 NAD(P)H-binding 8 187 4.0E-33 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu1999 313e2602ccd8214e9742146aaa55e0ef 203 SUPERFAMILY SSF51735 1 202 5.47E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1318 bdd3474064781037c7498d126a15f5c4 95 Gene3D G3DSA:1.10.20.60 1 93 1.5E-26 T 14-10-2018 Atu1318 bdd3474064781037c7498d126a15f5c4 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 3.6E-31 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Atu1318 bdd3474064781037c7498d126a15f5c4 95 SUPERFAMILY SSF141000 3 93 1.19E-29 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Atu1318 bdd3474064781037c7498d126a15f5c4 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 1.1E-20 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Atu1318 bdd3474064781037c7498d126a15f5c4 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.898 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 Gene3D G3DSA:3.10.180.10 172 286 3.4E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 Gene3D G3DSA:3.10.180.10 14 140 3.2E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 17 127 1.6E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 174 225 1.0E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 ProSitePatterns PS00934 Glyoxalase I signature 1. 176 197 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 SUPERFAMILY SSF54593 172 285 1.06E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0903 0c8f49472c1da99b7966ffb6ae990afb 286 SUPERFAMILY SSF54593 10 168 3.76E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0050 e18ad953efbf77f5d180b6fff7d6d8cc 195 Pfam PF02954 Bacterial regulatory protein, Fis family 159 187 1.7E-4 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu0050 e18ad953efbf77f5d180b6fff7d6d8cc 195 Pfam PF00072 Response regulator receiver domain 27 135 3.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0050 e18ad953efbf77f5d180b6fff7d6d8cc 195 Gene3D G3DSA:1.10.10.60 140 195 3.3E-23 T 14-10-2018 Atu0050 e18ad953efbf77f5d180b6fff7d6d8cc 195 Gene3D G3DSA:3.40.50.2300 24 139 2.1E-29 T 14-10-2018 Atu0050 e18ad953efbf77f5d180b6fff7d6d8cc 195 SUPERFAMILY SSF52172 23 181 5.12E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu0050 e18ad953efbf77f5d180b6fff7d6d8cc 195 SMART SM00448 24 135 7.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu6088 7849e464772764878188362f0352280b 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6088 7849e464772764878188362f0352280b 315 Pfam PF03466 LysR substrate binding domain 89 274 1.5E-23 T 14-10-2018 IPR005119 LysR, substrate-binding Atu6088 7849e464772764878188362f0352280b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6088 7849e464772764878188362f0352280b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6088 7849e464772764878188362f0352280b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6088 7849e464772764878188362f0352280b 315 SUPERFAMILY SSF46785 1 84 1.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6088 7849e464772764878188362f0352280b 315 Gene3D G3DSA:3.40.190.10 182 262 1.3E-6 T 14-10-2018 Atu6088 7849e464772764878188362f0352280b 315 Gene3D G3DSA:3.40.190.10 84 181 1.2E-9 T 14-10-2018 Atu6088 7849e464772764878188362f0352280b 315 SUPERFAMILY SSF53850 93 275 5.43E-21 T 14-10-2018 Atu6088 7849e464772764878188362f0352280b 315 Gene3D G3DSA:1.10.10.10 1 83 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1751 9daa607947332f3c7c3b0bfdd58f924a 312 Pfam PF01734 Patatin-like phospholipase 36 193 2.0E-25 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Atu1751 9daa607947332f3c7c3b0bfdd58f924a 312 Gene3D G3DSA:3.40.1090.10 24 128 8.4E-22 T 14-10-2018 Atu1751 9daa607947332f3c7c3b0bfdd58f924a 312 SUPERFAMILY SSF52151 30 305 7.06E-56 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Atu0390 ae0d01f0c6b2d1c9d5a2bb65d48372ab 270 SUPERFAMILY SSF53335 12 205 3.91E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0390 ae0d01f0c6b2d1c9d5a2bb65d48372ab 270 Pfam PF08241 Methyltransferase domain 45 142 7.6E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu0390 ae0d01f0c6b2d1c9d5a2bb65d48372ab 270 Gene3D G3DSA:3.40.50.150 13 249 6.2E-35 T 14-10-2018 Atu3439 dc85017c368c6d839c802e40c2765c02 412 SUPERFAMILY SSF47203 242 399 1.77E-14 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu3439 dc85017c368c6d839c802e40c2765c02 412 Gene3D G3DSA:1.10.540.10 20 128 3.6E-14 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu3439 dc85017c368c6d839c802e40c2765c02 412 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 384 1.3E-13 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Atu3439 dc85017c368c6d839c802e40c2765c02 412 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 219 1.6E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu3439 dc85017c368c6d839c802e40c2765c02 412 Gene3D G3DSA:2.40.110.10 129 229 5.2E-24 T 14-10-2018 Atu3439 dc85017c368c6d839c802e40c2765c02 412 Gene3D G3DSA:1.20.140.10 231 406 9.1E-46 T 14-10-2018 Atu3439 dc85017c368c6d839c802e40c2765c02 412 SUPERFAMILY SSF56645 34 221 1.57E-37 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu3439 dc85017c368c6d839c802e40c2765c02 412 PIRSF PIRSF016578 5 401 2.1E-27 T 14-10-2018 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 SUPERFAMILY SSF56091 43 233 1.71E-46 T 14-10-2018 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 Pfam PF04679 ATP dependent DNA ligase C terminal region 254 342 1.9E-21 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 Pfam PF01068 ATP dependent DNA ligase domain 56 233 3.1E-30 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 Gene3D G3DSA:3.30.1490.70 52 231 9.0E-48 T 14-10-2018 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 Gene3D G3DSA:3.30.470.30 67 190 9.0E-48 T 14-10-2018 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 SUPERFAMILY SSF50249 240 352 2.87E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 Gene3D G3DSA:2.40.50.140 236 351 2.0E-26 T 14-10-2018 Atu6090 1b232fd0a4d6341fe6c3153198210dcf 353 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 44 349 1.5E-99 T 14-10-2018 IPR014146 DNA ligase D, ligase domain Atu4470 7443199c0e7a30858766395b50008e81 300 Pfam PF00005 ABC transporter 26 173 1.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4470 7443199c0e7a30858766395b50008e81 300 Gene3D G3DSA:3.40.50.300 9 247 7.2E-60 T 14-10-2018 Atu4470 7443199c0e7a30858766395b50008e81 300 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4470 7443199c0e7a30858766395b50008e81 300 SUPERFAMILY SSF52540 8 236 1.15E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4470 7443199c0e7a30858766395b50008e81 300 SMART SM00382 35 221 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3816 e951e205bfaa369f2b1c404fed923045 348 SUPERFAMILY SSF51430 6 338 5.11E-57 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3816 e951e205bfaa369f2b1c404fed923045 348 Pfam PF00248 Aldo/keto reductase family 19 335 3.0E-37 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu3816 e951e205bfaa369f2b1c404fed923045 348 Gene3D G3DSA:3.20.20.100 5 336 1.5E-55 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.5 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 SMART SM00562 3 140 1.8E-78 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 Gene3D G3DSA:3.30.70.141 1 140 2.6E-53 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.9E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 SUPERFAMILY SSF54919 1 139 1.7E-54 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu1122 4407d7ccf017b6fd89c7a0ffaee5dca6 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 6.9E-53 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Atu0248 2a12327d01abb18821009b2f392f6890 365 SUPERFAMILY SSF46689 291 343 8.06E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0248 2a12327d01abb18821009b2f392f6890 365 SMART SM00342 255 338 4.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0248 2a12327d01abb18821009b2f392f6890 365 Gene3D G3DSA:1.10.10.60 232 349 8.9E-27 T 14-10-2018 Atu0248 2a12327d01abb18821009b2f392f6890 365 Pfam PF12833 Helix-turn-helix domain 261 340 1.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1709 de07e4e8c5a2d92b830215b9ec4726c0 338 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 31 297 1.1E-48 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Atu1709 de07e4e8c5a2d92b830215b9ec4726c0 338 Gene3D G3DSA:3.20.20.300 1 330 8.0E-87 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Atu1709 de07e4e8c5a2d92b830215b9ec4726c0 338 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 241 258 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Atu1709 de07e4e8c5a2d92b830215b9ec4726c0 338 SUPERFAMILY SSF51445 6 289 2.63E-66 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu4353 34c72a1a10f651e798def81b9c1003ac 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 343 3.1E-35 T 14-10-2018 IPR000160 GGDEF domain Atu4353 34c72a1a10f651e798def81b9c1003ac 612 SUPERFAMILY SSF55073 190 346 1.49E-42 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4353 34c72a1a10f651e798def81b9c1003ac 612 SMART SM00052 351 597 4.3E-74 T 14-10-2018 IPR001633 EAL domain Atu4353 34c72a1a10f651e798def81b9c1003ac 612 Pfam PF00563 EAL domain 369 592 1.3E-63 T 14-10-2018 IPR001633 EAL domain Atu4353 34c72a1a10f651e798def81b9c1003ac 612 SUPERFAMILY SSF141868 362 604 3.27E-72 T 14-10-2018 IPR035919 EAL domain superfamily Atu4353 34c72a1a10f651e798def81b9c1003ac 612 Gene3D G3DSA:3.20.20.450 358 607 6.8E-76 T 14-10-2018 IPR035919 EAL domain superfamily Atu4353 34c72a1a10f651e798def81b9c1003ac 612 Gene3D G3DSA:3.30.70.270 182 357 1.7E-48 T 14-10-2018 Atu4353 34c72a1a10f651e798def81b9c1003ac 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 185 339 4.8E-41 T 14-10-2018 IPR000160 GGDEF domain Atu4353 34c72a1a10f651e798def81b9c1003ac 612 SMART SM00267 170 345 4.5E-49 T 14-10-2018 IPR000160 GGDEF domain Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 SUPERFAMILY SSF53955 22 334 6.37E-90 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 Gene3D G3DSA:1.10.530.10 77 327 2.0E-76 T 14-10-2018 Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 Gene3D G3DSA:1.10.101.10 351 406 7.1E-10 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 34 332 1.1E-103 T 14-10-2018 IPR011970 Lytic murein transglycosylase Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 Gene3D G3DSA:1.10.8.350 45 215 2.0E-76 T 14-10-2018 Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 Pfam PF01471 Putative peptidoglycan binding domain 354 404 2.0E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 SUPERFAMILY SSF47090 351 405 5.76E-12 T 14-10-2018 IPR036365 PGBD-like superfamily Atu3779 ed7724ade0304e1ca0d4ea467e0be1ed 406 Pfam PF13406 Transglycosylase SLT domain 34 328 1.3E-96 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 Atu8162 f3c56c233f3608c8f85082d3260837f8 87 Gene3D G3DSA:1.10.1200.10 6 87 4.0E-16 T 14-10-2018 IPR036736 ACP-like superfamily Atu8162 f3c56c233f3608c8f85082d3260837f8 87 SUPERFAMILY SSF47336 12 83 8.2E-11 T 14-10-2018 IPR036736 ACP-like superfamily Atu0201 7bc7b043bc9cb2696fbdae9a83764af3 156 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Atu0201 7bc7b043bc9cb2696fbdae9a83764af3 156 SUPERFAMILY SSF46785 2 133 2.27E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0201 7bc7b043bc9cb2696fbdae9a83764af3 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 9.7E-35 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu0201 7bc7b043bc9cb2696fbdae9a83764af3 156 Pfam PF02082 Transcriptional regulator 1 81 7.7E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu0201 7bc7b043bc9cb2696fbdae9a83764af3 156 Gene3D G3DSA:1.10.10.10 1 140 5.3E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2420 58664bef48784c7f23eb6190304e2687 174 Gene3D G3DSA:3.40.50.300 5 169 9.0E-7 T 14-10-2018 Atu2420 58664bef48784c7f23eb6190304e2687 174 Pfam PF13521 AAA domain 5 165 7.6E-38 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain Atu2420 58664bef48784c7f23eb6190304e2687 174 SUPERFAMILY SSF52540 3 168 8.06E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 541 550 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 SUPERFAMILY SSF46689 589 623 3.72E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Pfam PF01590 GAF domain 66 193 2.6E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Gene3D G3DSA:3.30.450.40 14 203 2.3E-45 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Pfam PF00158 Sigma-54 interaction domain 334 496 1.3E-59 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Gene3D G3DSA:1.10.10.60 589 622 2.8E-11 T 14-10-2018 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 SMART SM00382 351 494 4.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Gene3D G3DSA:1.10.8.60 503 575 5.3E-14 T 14-10-2018 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 604 624 3.7E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 587 604 3.7E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 SUPERFAMILY SSF55781 61 202 1.45E-7 T 14-10-2018 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 SUPERFAMILY SSF52540 331 571 3.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 417 432 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 355 368 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Gene3D G3DSA:3.40.50.300 321 502 3.5E-57 T 14-10-2018 Atu4741 17d063b45332ba3a83aaf7b60dd9b885 627 Pfam PF02954 Bacterial regulatory protein, Fis family 590 621 8.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 Gene3D G3DSA:3.40.50.1980 207 335 2.0E-47 T 14-10-2018 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 Gene3D G3DSA:3.40.50.1980 29 206 4.8E-51 T 14-10-2018 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 332 2.2E-82 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 PRINTS PR00691 Adhesin B signature 53 71 3.2E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 PRINTS PR00691 Adhesin B signature 72 91 3.2E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 PRINTS PR00691 Adhesin B signature 28 49 3.2E-11 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 PRINTS PR00690 Adhesin family signature 28 46 6.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 PRINTS PR00690 Adhesin family signature 59 72 6.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 PRINTS PR00690 Adhesin family signature 72 89 6.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Atu3178 02ec4f68a284e5a4a0b33b10f7a06b11 337 SUPERFAMILY SSF53807 21 333 3.09E-89 T 14-10-2018 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 Pfam PF12833 Helix-turn-helix domain 204 281 4.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 SMART SM00342 198 281 3.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 SUPERFAMILY SSF51215 35 166 9.81E-11 T 14-10-2018 IPR037923 Transcription regulator HTH-like Atu4545 e858d74125dc7a488d81179ee6f73b84 307 Gene3D G3DSA:2.60.120.10 13 100 3.5E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4545 e858d74125dc7a488d81179ee6f73b84 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 7.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 7.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 Gene3D G3DSA:1.10.10.60 177 293 6.2E-23 T 14-10-2018 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 SUPERFAMILY SSF46689 236 281 9.41E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4545 e858d74125dc7a488d81179ee6f73b84 307 Pfam PF02311 AraC-like ligand binding domain 32 125 2.0E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 3.3E-33 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 270 31.714 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 PIRSF PIRSF000161 4 273 6.0E-76 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 SUPERFAMILY SSF55347 131 241 3.71E-33 T 14-10-2018 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 Gene3D G3DSA:3.30.360.10 131 239 4.6E-92 T 14-10-2018 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 SUPERFAMILY SSF51735 6 272 1.76E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0183 54bb29b786d9265eb86911c1ddf68794 275 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 155 172 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 269 2.5E-40 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 270 3.3E-78 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Atu0183 54bb29b786d9265eb86911c1ddf68794 275 Gene3D G3DSA:3.40.50.720 9 269 4.6E-92 T 14-10-2018 Atu5085 4772a7293d0319067c0008860ba4548b 319 SUPERFAMILY SSF56281 30 316 9.27E-48 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5085 4772a7293d0319067c0008860ba4548b 319 Pfam PF00753 Metallo-beta-lactamase superfamily 88 272 4.0E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu5085 4772a7293d0319067c0008860ba4548b 319 SMART SM00849 90 295 7.3E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu5085 4772a7293d0319067c0008860ba4548b 319 Gene3D G3DSA:3.60.15.10 29 319 4.3E-96 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5124 bd03255d2eb7314261e92b4662f50948 444 Pfam PF00202 Aminotransferase class-III 42 354 3.1E-51 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5124 bd03255d2eb7314261e92b4662f50948 444 Gene3D G3DSA:3.40.640.10 79 331 7.7E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu5124 bd03255d2eb7314261e92b4662f50948 444 Gene3D G3DSA:3.90.1150.10 21 426 7.7E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu5124 bd03255d2eb7314261e92b4662f50948 444 SUPERFAMILY SSF53383 32 433 3.17E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1987 7698115c920575839fbd4c66407a00b4 124 Gene3D G3DSA:3.40.50.2300 6 122 5.2E-31 T 14-10-2018 Atu1987 7698115c920575839fbd4c66407a00b4 124 SUPERFAMILY SSF52172 6 120 3.7E-16 T 14-10-2018 IPR011006 CheY-like superfamily Atu1987 7698115c920575839fbd4c66407a00b4 124 Pfam PF00072 Response regulator receiver domain 10 114 5.2E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1987 7698115c920575839fbd4c66407a00b4 124 SMART SM00448 8 116 2.6E-6 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3579 9997049f52c850f92eeb0894dd1211f5 138 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 132 2.4E-53 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Atu3579 9997049f52c850f92eeb0894dd1211f5 138 Gene3D G3DSA:3.10.180.10 1 133 8.1E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3579 9997049f52c850f92eeb0894dd1211f5 138 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 117 1.3E-19 T 14-10-2018 Atu3579 9997049f52c850f92eeb0894dd1211f5 138 SUPERFAMILY SSF54593 1 133 2.34E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu5041 15735bb906f1a1f66291d36c8e50e070 295 SUPERFAMILY SSF109709 89 199 5.1E-18 T 14-10-2018 Atu5041 15735bb906f1a1f66291d36c8e50e070 295 Gene3D G3DSA:3.90.1530.30 21 82 1.1E-7 T 14-10-2018 Atu5041 15735bb906f1a1f66291d36c8e50e070 295 SUPERFAMILY SSF110849 3 100 4.19E-20 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu5041 15735bb906f1a1f66291d36c8e50e070 295 Pfam PF07506 RepB plasmid partitioning protein 98 269 7.4E-41 T 14-10-2018 IPR011111 RepB plasmid partition Atu5041 15735bb906f1a1f66291d36c8e50e070 295 SMART SM00470 9 97 4.1E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu5041 15735bb906f1a1f66291d36c8e50e070 295 Gene3D G3DSA:1.10.10.2830 86 197 1.9E-11 T 14-10-2018 Atu5041 15735bb906f1a1f66291d36c8e50e070 295 Pfam PF02195 ParB-like nuclease domain 11 96 1.4E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu4781 f39a5bd8714114347928208d4d9e8467 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4781 f39a5bd8714114347928208d4d9e8467 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 657 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4781 f39a5bd8714114347928208d4d9e8467 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4781 f39a5bd8714114347928208d4d9e8467 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 643 1.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4781 f39a5bd8714114347928208d4d9e8467 710 Gene3D G3DSA:1.10.287.130 474 548 6.6E-8 T 14-10-2018 Atu4781 f39a5bd8714114347928208d4d9e8467 710 SUPERFAMILY SSF55874 548 698 1.96E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4781 f39a5bd8714114347928208d4d9e8467 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 597 697 5.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4781 f39a5bd8714114347928208d4d9e8467 710 SUPERFAMILY SSF47384 480 545 2.35E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4781 f39a5bd8714114347928208d4d9e8467 710 SMART SM00387 592 700 9.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4781 f39a5bd8714114347928208d4d9e8467 710 Gene3D G3DSA:3.30.565.10 554 705 3.0E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4781 f39a5bd8714114347928208d4d9e8467 710 Gene3D G3DSA:3.30.450.20 351 473 2.5E-5 T 14-10-2018 Atu3996 39cae27c659f2a5044c60e5e99903cf4 148 SUPERFAMILY SSF55729 1 142 1.59E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3996 39cae27c659f2a5044c60e5e99903cf4 148 Gene3D G3DSA:3.40.630.30 1 146 8.4E-37 T 14-10-2018 Atu3996 39cae27c659f2a5044c60e5e99903cf4 148 Pfam PF13673 Acetyltransferase (GNAT) domain 51 127 3.0E-14 T 14-10-2018 IPR000182 GNAT domain Atu5060 db51e59d23c7efc6c4a7e87c45779cb3 269 SUPERFAMILY SSF161098 6 269 1.09E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu5060 db51e59d23c7efc6c4a7e87c45779cb3 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 263 5.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5060 db51e59d23c7efc6c4a7e87c45779cb3 269 Gene3D G3DSA:1.10.3720.10 5 261 2.2E-63 T 14-10-2018 IPR035906 MetI-like superfamily Atu1928 e8e1483c263642cebc58cb93c0e1a8bb 159 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 2.3E-34 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P Atu1928 e8e1483c263642cebc58cb93c0e1a8bb 159 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1928 e8e1483c263642cebc58cb93c0e1a8bb 159 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 19.621 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Atu1928 e8e1483c263642cebc58cb93c0e1a8bb 159 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 148 9.3E-46 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1928 e8e1483c263642cebc58cb93c0e1a8bb 159 Gene3D G3DSA:3.100.10.10 65 153 2.1E-17 T 14-10-2018 Atu1928 e8e1483c263642cebc58cb93c0e1a8bb 159 SUPERFAMILY SSF52080 4 148 2.49E-42 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Atu5371 f2be8ca22daa88cafb1e9de39ab2843a 96 Pfam PF01527 Transposase 2 74 5.7E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu5371 f2be8ca22daa88cafb1e9de39ab2843a 96 Gene3D G3DSA:1.10.10.60 7 89 2.0E-13 T 14-10-2018 Atu5371 f2be8ca22daa88cafb1e9de39ab2843a 96 SUPERFAMILY SSF46689 1 94 5.02E-23 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu6140 e50b5c6c93ca3cfcade240d5fdcfcf16 299 SMART SM00382 18 215 4.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6140 e50b5c6c93ca3cfcade240d5fdcfcf16 299 Pfam PF00005 ABC transporter 10 158 2.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6140 e50b5c6c93ca3cfcade240d5fdcfcf16 299 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 210 275 1.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu6140 e50b5c6c93ca3cfcade240d5fdcfcf16 299 Gene3D G3DSA:3.40.50.300 1 298 3.6E-76 T 14-10-2018 Atu6140 e50b5c6c93ca3cfcade240d5fdcfcf16 299 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 208 294 1.3E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu6140 e50b5c6c93ca3cfcade240d5fdcfcf16 299 SUPERFAMILY SSF52540 19 284 1.51E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5232 1b7fe53c7a0d3eb63675ae8503257701 130 Pfam PF01042 Endoribonuclease L-PSP 21 127 6.2E-27 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Atu5232 1b7fe53c7a0d3eb63675ae8503257701 130 SUPERFAMILY SSF55298 7 129 4.4E-33 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu5232 1b7fe53c7a0d3eb63675ae8503257701 130 Gene3D G3DSA:3.30.1330.40 12 130 1.6E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu3158 8075c6f6a7848e84b1214e5c35da43d0 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 286 3.2E-73 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3158 8075c6f6a7848e84b1214e5c35da43d0 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 304 2.8E-78 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu3158 8075c6f6a7848e84b1214e5c35da43d0 331 PIRSF PIRSF006470 1 327 2.3E-85 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3158 8075c6f6a7848e84b1214e5c35da43d0 331 Gene3D G3DSA:3.40.190.170 24 326 4.7E-88 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 298 1.9E-55 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 SUPERFAMILY SSF51735 108 299 9.56E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 Gene3D G3DSA:3.40.50.720 9 325 5.2E-105 T 14-10-2018 Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 Gene3D G3DSA:3.40.50.720 103 298 5.2E-105 T 14-10-2018 Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 235 251 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 SUPERFAMILY SSF52283 6 136 5.48E-34 T 14-10-2018 Atu0077 0ce44e13e4a4d9a0ae5c16bfbad996ac 334 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 329 3.1E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu4137 a0862ba34aaa4464d42c0329d0de7f18 161 PRINTS PR01837 MgtC/SapB protein signature 46 64 1.4E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu4137 a0862ba34aaa4464d42c0329d0de7f18 161 PRINTS PR01837 MgtC/SapB protein signature 27 46 1.4E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu4137 a0862ba34aaa4464d42c0329d0de7f18 161 PRINTS PR01837 MgtC/SapB protein signature 81 103 1.4E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu4137 a0862ba34aaa4464d42c0329d0de7f18 161 PRINTS PR01837 MgtC/SapB protein signature 108 132 1.4E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu4137 a0862ba34aaa4464d42c0329d0de7f18 161 Pfam PF02308 MgtC family 27 153 6.5E-29 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu5001 f919958b1b62ba4db933f2e057e12091 343 SMART SM00470 76 168 3.2E-21 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu5001 f919958b1b62ba4db933f2e057e12091 343 Pfam PF07506 RepB plasmid partitioning protein 170 334 2.1E-15 T 14-10-2018 IPR011111 RepB plasmid partition Atu5001 f919958b1b62ba4db933f2e057e12091 343 SUPERFAMILY SSF109709 162 238 3.92E-5 T 14-10-2018 Atu5001 f919958b1b62ba4db933f2e057e12091 343 TIGRFAM TIGR03454 partition_RepB: plasmid partitioning protein RepB 6 337 8.3E-105 T 14-10-2018 IPR017819 Plasmid partitioning protein, RepB Atu5001 f919958b1b62ba4db933f2e057e12091 343 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 75 254 5.2E-33 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atu5001 f919958b1b62ba4db933f2e057e12091 343 Gene3D G3DSA:3.90.1530.30 94 157 2.3E-9 T 14-10-2018 Atu5001 f919958b1b62ba4db933f2e057e12091 343 Pfam PF02195 ParB-like nuclease domain 77 167 3.4E-16 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu5001 f919958b1b62ba4db933f2e057e12091 343 SUPERFAMILY SSF110849 75 170 1.08E-17 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu0750 e9864922e7bc79eb2f7ba3a6fe5e284b 210 Pfam PF02361 Cobalt transport protein 11 199 2.5E-10 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Atu4296 9e861af7fe0318af682ace589206f5b6 527 Pfam PF05199 GMC oxidoreductase 445 500 1.9E-16 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Atu4296 9e861af7fe0318af682ace589206f5b6 527 Gene3D G3DSA:3.50.50.60 421 513 3.3E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4296 9e861af7fe0318af682ace589206f5b6 527 SUPERFAMILY SSF51905 12 508 1.66E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4296 9e861af7fe0318af682ace589206f5b6 527 ProSitePatterns PS00221 MIP family signature. 487 495 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Atu4296 9e861af7fe0318af682ace589206f5b6 527 Gene3D G3DSA:3.50.50.60 10 163 5.0E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4296 9e861af7fe0318af682ace589206f5b6 527 Pfam PF00732 GMC oxidoreductase 14 306 3.1E-20 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu4296 9e861af7fe0318af682ace589206f5b6 527 Gene3D G3DSA:3.50.50.60 206 299 5.4E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 333 342 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 Pfam PF00067 Cytochrome P450 265 362 3.3E-14 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 Gene3D G3DSA:1.10.630.10 7 391 5.3E-83 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 SUPERFAMILY SSF48264 14 390 4.98E-69 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 80 91 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 340 351 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 144 159 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 265 276 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 331 340 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 188 210 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 310 325 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 127 143 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6151 bc1f13cf3402e8973dfb3040e0daf1da 391 PRINTS PR00359 B-class P450 signature 282 309 1.7E-28 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 450 4.5E-220 T 14-10-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 321 7.1E-62 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 Gene3D G3DSA:3.30.390.30 340 462 3.8E-46 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 449 4.8E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PIRSF PIRSF000350 1 451 1.3E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 Gene3D G3DSA:3.50.50.60 6 318 1.9E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 Gene3D G3DSA:3.50.50.60 146 264 1.9E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 SUPERFAMILY SSF55424 337 455 2.92E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 272 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 1.3E-61 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 SUPERFAMILY SSF51905 3 367 9.36E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.7E-29 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 6.7E-29 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 6.7E-29 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 6.7E-29 T 14-10-2018 Atu1611 41c3e8fe9cba5ed2fa0ed7ac7e27fd8e 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 6.7E-29 T 14-10-2018 Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 SUPERFAMILY SSF56281 9 424 1.41E-79 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 365 411 2.0E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 Pfam PF12706 Beta-lactamase superfamily domain 35 169 9.0E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 SMART SM00849 19 218 1.7E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 Gene3D G3DSA:3.40.50.10710 210 359 2.2E-153 T 14-10-2018 Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 Gene3D G3DSA:3.10.20.580 449 555 4.5E-6 T 14-10-2018 Atu1285 bb2b29dfe0b46712654ddd00e5e9a76d 555 Gene3D G3DSA:3.60.15.10 9 438 2.2E-153 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu0133 755cfe888ad7767e1597bf217de01b79 438 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 6 420 9.0E-161 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 SMART SM00941 349 423 4.6E-27 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 349 422 1.4E-21 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 PIRSF PIRSF000478 3 438 2.9E-152 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 4.5E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Gene3D G3DSA:1.20.970.10 5 69 1.0E-21 T 14-10-2018 Atu0133 755cfe888ad7767e1597bf217de01b79 438 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 437 1.1E-228 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Pfam PF00591 Glycosyl transferase family, a/b domain 79 308 2.6E-44 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Gene3D G3DSA:3.40.1030.10 71 337 1.4E-106 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 SUPERFAMILY SSF47648 6 71 4.71E-19 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Gene3D G3DSA:3.90.1170.30 338 431 1.6E-25 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 SUPERFAMILY SSF54680 336 437 1.7E-27 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 Hamap MF_01628 Thymidine phosphorylase [deoA]. 3 437 45.454 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 Atu0133 755cfe888ad7767e1597bf217de01b79 438 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 112 127 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0133 755cfe888ad7767e1597bf217de01b79 438 SUPERFAMILY SSF52418 72 332 2.62E-91 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Atu0692 d46ab2eee2c4e7740557fe72b55f9bbb 610 Gene3D G3DSA:1.20.1530.20 7 387 3.7E-78 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu0692 d46ab2eee2c4e7740557fe72b55f9bbb 610 Gene3D G3DSA:3.40.50.720 401 561 6.6E-33 T 14-10-2018 Atu0692 d46ab2eee2c4e7740557fe72b55f9bbb 610 SUPERFAMILY SSF51735 403 532 7.41E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0692 d46ab2eee2c4e7740557fe72b55f9bbb 610 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 285 4.9E-76 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Atu0692 d46ab2eee2c4e7740557fe72b55f9bbb 610 Pfam PF00999 Sodium/hydrogen exchanger family 13 375 7.1E-64 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Atu0692 d46ab2eee2c4e7740557fe72b55f9bbb 610 Pfam PF02254 TrkA-N domain 404 514 9.1E-20 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atu3887 3ccfad1131324da7b295d59e360279db 160 SUPERFAMILY SSF49764 5 140 1.26E-22 T 14-10-2018 IPR008978 HSP20-like chaperone Atu3887 3ccfad1131324da7b295d59e360279db 160 Pfam PF00011 Hsp20/alpha crystallin family 44 140 5.4E-18 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Atu3887 3ccfad1131324da7b295d59e360279db 160 Gene3D G3DSA:2.60.40.790 34 141 1.9E-23 T 14-10-2018 IPR008978 HSP20-like chaperone Atu0153 72267b27860c2c43b1a9c55e91f910d6 139 Gene3D G3DSA:1.10.10.10 7 89 7.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0153 72267b27860c2c43b1a9c55e91f910d6 139 Pfam PF01475 Ferric uptake regulator family 16 129 6.3E-20 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Atu0153 72267b27860c2c43b1a9c55e91f910d6 139 SUPERFAMILY SSF46785 11 133 1.07E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5484 8b435a6b257d7a06a2fbe0d508d31123 248 SUPERFAMILY SSF51206 12 128 1.31E-8 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu5484 8b435a6b257d7a06a2fbe0d508d31123 248 Gene3D G3DSA:2.60.120.10 10 136 9.3E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu5484 8b435a6b257d7a06a2fbe0d508d31123 248 Pfam PF13545 Crp-like helix-turn-helix domain 150 216 9.5E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu5484 8b435a6b257d7a06a2fbe0d508d31123 248 SUPERFAMILY SSF46785 148 218 3.18E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5484 8b435a6b257d7a06a2fbe0d508d31123 248 Gene3D G3DSA:1.10.10.10 146 218 6.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0988 954622a6c09c472bc98171e558276af9 432 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 380 394 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Atu0988 954622a6c09c472bc98171e558276af9 432 SUPERFAMILY SSF53067 185 422 3.42E-31 T 14-10-2018 Atu0988 954622a6c09c472bc98171e558276af9 432 Pfam PF00012 Hsp70 protein 311 420 4.4E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0988 954622a6c09c472bc98171e558276af9 432 Pfam PF00012 Hsp70 protein 108 239 1.7E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Atu0988 954622a6c09c472bc98171e558276af9 432 SUPERFAMILY SSF53067 6 182 2.59E-18 T 14-10-2018 Atu0988 954622a6c09c472bc98171e558276af9 432 Gene3D G3DSA:3.30.420.40 331 407 5.0E-7 T 14-10-2018 Atu0988 954622a6c09c472bc98171e558276af9 432 Gene3D G3DSA:3.30.420.40 5 209 2.4E-19 T 14-10-2018 Atu4586 551b882f07e9d65521b4078d493d324a 355 Gene3D G3DSA:3.60.60.10 30 355 1.2E-132 T 14-10-2018 Atu4586 551b882f07e9d65521b4078d493d324a 355 SUPERFAMILY SSF56235 30 327 6.71E-104 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu4586 551b882f07e9d65521b4078d493d324a 355 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 30 317 3.6E-49 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal Atu4272 252d111bfc955ac030630d5d2c7667b9 147 SUPERFAMILY SSF51230 71 146 5.5E-19 T 14-10-2018 IPR011053 Single hybrid motif Atu4272 252d111bfc955ac030630d5d2c7667b9 147 Pfam PF00364 Biotin-requiring enzyme 73 146 3.4E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu4272 252d111bfc955ac030630d5d2c7667b9 147 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 103 120 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu4272 252d111bfc955ac030630d5d2c7667b9 147 Gene3D G3DSA:2.40.50.100 70 146 7.5E-24 T 14-10-2018 Atu4272 252d111bfc955ac030630d5d2c7667b9 147 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 121 1.2E-10 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu4272 252d111bfc955ac030630d5d2c7667b9 147 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 76 89 1.2E-10 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu4272 252d111bfc955ac030630d5d2c7667b9 147 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 93 107 1.2E-10 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu0120 2a876b18e2aed29ab5ca7c02af4f7d4c 183 Pfam PF06041 Bacterial protein of unknown function (DUF924) 12 180 3.3E-54 T 14-10-2018 IPR010323 Protein of unknown function DUF924 Atu0120 2a876b18e2aed29ab5ca7c02af4f7d4c 183 SUPERFAMILY SSF48452 6 179 1.02E-60 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0120 2a876b18e2aed29ab5ca7c02af4f7d4c 183 Gene3D G3DSA:1.20.58.320 2 83 9.4E-31 T 14-10-2018 Atu0120 2a876b18e2aed29ab5ca7c02af4f7d4c 183 Gene3D G3DSA:1.25.40.10 84 183 4.7E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 Gene3D G3DSA:1.20.1260.10 8 169 2.2E-66 T 14-10-2018 IPR012347 Ferritin-like Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 SUPERFAMILY SSF47240 10 163 8.9E-51 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 Pfam PF00210 Ferritin-like domain 16 151 1.0E-34 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PIRSF PIRSF002560 9 165 1.5E-63 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 73 93 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 136 157 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 94 114 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 52 72 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 11 30 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 31 51 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 PRINTS PR00601 Bacterioferritin signature 115 135 1.5E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2771 5c8323a46390ad8071a26c2332c50b2d 169 TIGRFAM TIGR00754 bfr: bacterioferritin 9 159 8.5E-57 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Atu2299 f615da958d077449a8e923d4aa4fdce4 202 SUPERFAMILY SSF54001 1 202 7.52E-90 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu2299 f615da958d077449a8e923d4aa4fdce4 202 Gene3D G3DSA:3.10.550.10 1 202 6.1E-79 T 14-10-2018 IPR023107 Atu2299-like domain superfamily Atu2299 f615da958d077449a8e923d4aa4fdce4 202 Pfam PF09641 Protein of unknown function (DUF2026) 4 202 4.8E-93 T 14-10-2018 IPR018599 Protein of unknown function DUF2026 Atu3354 90424c725544969a83fc29fef61a73d4 802 Gene3D G3DSA:2.140.10.10 572 802 5.3E-40 T 14-10-2018 Atu3354 90424c725544969a83fc29fef61a73d4 802 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 412 433 - T 14-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 Atu3354 90424c725544969a83fc29fef61a73d4 802 SMART SM00564 656 695 49.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 SMART SM00564 347 388 20.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 SMART SM00564 723 756 8.4E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 SMART SM00564 427 466 140.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 SMART SM00564 218 249 0.0013 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 SMART SM00564 491 521 92.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 11 801 0.0 T 14-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 Atu3354 90424c725544969a83fc29fef61a73d4 802 Pfam PF01011 PQQ enzyme repeat 450 476 4.9E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 Pfam PF01011 PQQ enzyme repeat 729 766 8.9E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 Pfam PF01011 PQQ enzyme repeat 223 254 7.6E-8 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Atu3354 90424c725544969a83fc29fef61a73d4 802 Gene3D G3DSA:2.140.10.10 157 566 3.4E-106 T 14-10-2018 Atu3354 90424c725544969a83fc29fef61a73d4 802 SUPERFAMILY SSF50998 162 788 6.8E-141 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Atu4822 8fdd3d665849d7b1d8f83dc1f1e16c05 546 SUPERFAMILY SSF56801 21 532 3.79E-136 T 14-10-2018 Atu4822 8fdd3d665849d7b1d8f83dc1f1e16c05 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 521 4.6E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu4822 8fdd3d665849d7b1d8f83dc1f1e16c05 546 Gene3D G3DSA:3.40.50.12780 12 434 4.0E-101 T 14-10-2018 Atu4822 8fdd3d665849d7b1d8f83dc1f1e16c05 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu4822 8fdd3d665849d7b1d8f83dc1f1e16c05 546 Gene3D G3DSA:3.30.300.310 435 536 3.2E-29 T 14-10-2018 Atu4822 8fdd3d665849d7b1d8f83dc1f1e16c05 546 Pfam PF00501 AMP-binding enzyme 29 435 3.5E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3416 eb8ec5a5197007ed67844fa41fb0c787 312 Gene3D G3DSA:3.40.190.10 78 292 1.1E-40 T 14-10-2018 Atu3416 eb8ec5a5197007ed67844fa41fb0c787 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 77 292 3.8E-37 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3416 eb8ec5a5197007ed67844fa41fb0c787 312 Gene3D G3DSA:3.40.190.10 149 254 1.1E-40 T 14-10-2018 Atu3416 eb8ec5a5197007ed67844fa41fb0c787 312 SMART SM00062 64 297 3.3E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3416 eb8ec5a5197007ed67844fa41fb0c787 312 SUPERFAMILY SSF53850 15 293 3.63E-40 T 14-10-2018 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 Gene3D G3DSA:3.40.50.2300 143 271 7.1E-117 T 14-10-2018 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 Pfam PF13458 Periplasmic binding protein 24 363 9.9E-64 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 Gene3D G3DSA:3.40.50.2300 27 340 7.1E-117 T 14-10-2018 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 253 271 9.9E-21 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 47 63 9.9E-21 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 25 41 9.9E-21 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 84 9.9E-21 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 276 289 9.9E-21 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 87 97 9.9E-21 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu2276 dcf0f935bfc1b742732fd854fdd6e705 368 SUPERFAMILY SSF53822 24 365 6.6E-91 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 Gene3D G3DSA:3.40.50.2000 249 459 4.8E-190 T 14-10-2018 Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 Pfam PF00534 Glycosyl transferases group 1 288 437 3.2E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 Gene3D G3DSA:3.40.50.2000 3 473 4.8E-190 T 14-10-2018 Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 SUPERFAMILY SSF53756 1 476 2.97E-122 T 14-10-2018 Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 Pfam PF08323 Starch synthase catalytic domain 2 234 7.7E-70 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 45.851 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atu4075 166a99e85779d5ffa1ba0b1ca1f88591 480 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.9E-173 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Atu5477 97b13ab27927b44af72d76ee5680ea36 389 SUPERFAMILY SSF55920 157 388 1.57E-54 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu5477 97b13ab27927b44af72d76ee5680ea36 389 Pfam PF01321 Creatinase/Prolidase N-terminal domain 24 157 1.5E-20 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Atu5477 97b13ab27927b44af72d76ee5680ea36 389 SUPERFAMILY SSF53092 13 155 1.48E-29 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu5477 97b13ab27927b44af72d76ee5680ea36 389 Gene3D G3DSA:3.90.230.10 156 387 3.2E-45 T 14-10-2018 Atu5477 97b13ab27927b44af72d76ee5680ea36 389 Gene3D G3DSA:3.40.350.10 6 155 1.4E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu5477 97b13ab27927b44af72d76ee5680ea36 389 Pfam PF00557 Metallopeptidase family M24 164 373 3.3E-32 T 14-10-2018 IPR000994 Peptidase M24 Atu4430 fdee1ffce09a38297defffe2c8b090d4 351 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 345 4.2E-101 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Atu4430 fdee1ffce09a38297defffe2c8b090d4 351 Gene3D G3DSA:3.20.20.140 1 351 1.4E-113 T 14-10-2018 Atu4430 fdee1ffce09a38297defffe2c8b090d4 351 SUPERFAMILY SSF51556 3 348 6.89E-91 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu4656 a5c6362a49a81352488960145dcdfa4b 800 Pfam PF02585 GlcNAc-PI de-N-acetylase 37 173 2.9E-15 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Atu4656 a5c6362a49a81352488960145dcdfa4b 800 Gene3D G3DSA:3.40.50.10320 21 240 1.3E-35 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Atu4656 a5c6362a49a81352488960145dcdfa4b 800 SUPERFAMILY SSF102588 31 256 2.09E-37 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Atu4656 a5c6362a49a81352488960145dcdfa4b 800 SUPERFAMILY SSF52317 597 797 2.98E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3151 127de112a16f355da152dfdb84f0f26e 423 Gene3D G3DSA:3.40.190.10 42 345 6.6E-70 T 14-10-2018 Atu3151 127de112a16f355da152dfdb84f0f26e 423 Pfam PF01547 Bacterial extracellular solute-binding protein 36 322 1.9E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3151 127de112a16f355da152dfdb84f0f26e 423 SUPERFAMILY SSF53850 22 415 5.18E-67 T 14-10-2018 Atu3151 127de112a16f355da152dfdb84f0f26e 423 Gene3D G3DSA:3.40.190.10 139 373 6.6E-70 T 14-10-2018 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 Gene3D G3DSA:1.10.10.60 2 69 9.7E-23 T 14-10-2018 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 Gene3D G3DSA:1.10.357.10 70 211 5.8E-51 T 14-10-2018 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 SUPERFAMILY SSF46689 10 89 3.95E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 8.0E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 Pfam PF08362 YcdC-like protein, C-terminal region 71 210 1.3E-59 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 Atu2384 c628cb82b7e25344cdf31a55f377b8d8 213 SUPERFAMILY SSF48498 87 210 2.67E-44 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu5543 72c637a23901e89551c6eed132fbe865 215 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 179 194 6.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu5543 72c637a23901e89551c6eed132fbe865 215 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 194 210 6.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu5543 72c637a23901e89551c6eed132fbe865 215 Pfam PF12833 Helix-turn-helix domain 134 211 8.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5543 72c637a23901e89551c6eed132fbe865 215 SUPERFAMILY SSF51182 3 137 1.6E-7 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu5543 72c637a23901e89551c6eed132fbe865 215 SMART SM00342 128 210 4.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5543 72c637a23901e89551c6eed132fbe865 215 SUPERFAMILY SSF46689 167 213 1.0E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5543 72c637a23901e89551c6eed132fbe865 215 Gene3D G3DSA:1.10.10.60 111 215 1.6E-18 T 14-10-2018 Atu2295 a389db70e2947c78955f21ea20de18e4 554 SUPERFAMILY SSF51011 479 550 4.22E-9 T 14-10-2018 Atu2295 a389db70e2947c78955f21ea20de18e4 554 SMART SM00642 25 416 6.4E-122 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu2295 a389db70e2947c78955f21ea20de18e4 554 Gene3D G3DSA:3.90.400.10 117 187 4.0E-176 T 14-10-2018 Atu2295 a389db70e2947c78955f21ea20de18e4 554 SUPERFAMILY SSF51445 16 476 5.89E-130 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu2295 a389db70e2947c78955f21ea20de18e4 554 Gene3D G3DSA:2.60.40.1180 480 550 2.2E-5 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu2295 a389db70e2947c78955f21ea20de18e4 554 Pfam PF00128 Alpha amylase, catalytic domain 40 391 6.2E-90 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Atu2295 a389db70e2947c78955f21ea20de18e4 554 Pfam PF16657 Maltogenic Amylase, C-terminal domain 479 535 1.5E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal Atu2295 a389db70e2947c78955f21ea20de18e4 554 Gene3D G3DSA:3.20.20.80 17 471 4.0E-176 T 14-10-2018 Atu4802 cd68e9bf2f2016176add00d8890101e0 467 Pfam PF00202 Aminotransferase class-III 42 343 2.1E-38 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu4802 cd68e9bf2f2016176add00d8890101e0 467 Gene3D G3DSA:3.40.640.10 77 319 1.2E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu4802 cd68e9bf2f2016176add00d8890101e0 467 SUPERFAMILY SSF53383 39 413 2.91E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu4802 cd68e9bf2f2016176add00d8890101e0 467 Gene3D G3DSA:3.90.1150.10 16 408 1.2E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 Gene3D G3DSA:3.40.50.2300 1 158 4.0E-59 T 14-10-2018 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 150 1.8E-44 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00720 Mammalian LMW phosphotyrosine protein phosphatase signature 131 152 6.1E-6 T 14-10-2018 IPR002115 Protein-tyrosine phosphatase, low molecular weight, mammalian GO:0003993|GO:0004726|GO:0005737|GO:0006470 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00720 Mammalian LMW phosphotyrosine protein phosphatase signature 86 106 6.1E-6 T 14-10-2018 IPR002115 Protein-tyrosine phosphatase, low molecular weight, mammalian GO:0003993|GO:0004726|GO:0005737|GO:0006470 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00720 Mammalian LMW phosphotyrosine protein phosphatase signature 69 84 6.1E-6 T 14-10-2018 IPR002115 Protein-tyrosine phosphatase, low molecular weight, mammalian GO:0003993|GO:0004726|GO:0005737|GO:0006470 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 SMART SM00226 4 152 1.3E-58 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 SUPERFAMILY SSF52788 2 153 2.22E-55 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 106 119 3.7E-28 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 3.7E-28 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 3.7E-28 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 3.7E-28 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Atu2677 3be80013381a6e0b2e9bbb6174e1df21 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 3.7E-28 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Atu2026 88c24fdf01a58938e423b4b7e14f30de 375 SUPERFAMILY SSF52540 3 158 6.07E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2026 88c24fdf01a58938e423b4b7e14f30de 375 Pfam PF13538 UvrD-like helicase C-terminal domain 326 374 1.8E-19 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain Atu2026 88c24fdf01a58938e423b4b7e14f30de 375 Pfam PF13604 AAA domain 14 191 4.2E-26 T 14-10-2018 Atu2026 88c24fdf01a58938e423b4b7e14f30de 375 Gene3D G3DSA:3.40.50.300 293 375 1.1E-16 T 14-10-2018 Atu2026 88c24fdf01a58938e423b4b7e14f30de 375 SUPERFAMILY SSF52540 134 374 2.94E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2026 88c24fdf01a58938e423b4b7e14f30de 375 Gene3D G3DSA:3.40.50.300 2 190 2.2E-32 T 14-10-2018 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu3885 bce22870e3966a34a9f9ea631949a5be 258 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 6 255 2.4E-94 T 14-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 Gene3D G3DSA:3.40.190.80 143 256 1.6E-32 T 14-10-2018 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 Gene3D G3DSA:3.30.540.10 4 135 3.8E-34 T 14-10-2018 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 Pfam PF00459 Inositol monophosphatase family 8 255 4.2E-47 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 SUPERFAMILY SSF56655 3 257 2.36E-69 T 14-10-2018 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 8.2E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 8.2E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 8.2E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3885 bce22870e3966a34a9f9ea631949a5be 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 8.2E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 SMART SM00922 150 253 5.3E-19 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 SUPERFAMILY SSF54826 1 127 1.31E-28 T 14-10-2018 Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 Pfam PF13378 Enolase C-terminal domain-like 153 372 6.2E-53 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 125 3.3E-10 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 Gene3D G3DSA:3.30.390.10 1 117 2.9E-30 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 SUPERFAMILY SSF51604 113 380 3.28E-65 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu3453 a0eb5cf4578d7a82f161371d55d61c44 382 Gene3D G3DSA:3.20.20.120 118 382 1.1E-104 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4205 6880752a35614c364e12913bb9456780 215 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 67 208 3.2E-43 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Atu4205 6880752a35614c364e12913bb9456780 215 SUPERFAMILY SSF46689 4 60 6.16E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4205 6880752a35614c364e12913bb9456780 215 Gene3D G3DSA:1.10.357.10 66 212 6.4E-29 T 14-10-2018 Atu4205 6880752a35614c364e12913bb9456780 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 8.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4205 6880752a35614c364e12913bb9456780 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 8.8E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4205 6880752a35614c364e12913bb9456780 215 PRINTS PR00400 Tetracycline repressor protein signature 20 43 1.5E-25 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Atu4205 6880752a35614c364e12913bb9456780 215 PRINTS PR00400 Tetracycline repressor protein signature 74 93 1.5E-25 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Atu4205 6880752a35614c364e12913bb9456780 215 PRINTS PR00400 Tetracycline repressor protein signature 94 117 1.5E-25 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Atu4205 6880752a35614c364e12913bb9456780 215 PRINTS PR00400 Tetracycline repressor protein signature 129 148 1.5E-25 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Atu4205 6880752a35614c364e12913bb9456780 215 SUPERFAMILY SSF48498 67 212 3.0E-27 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu4205 6880752a35614c364e12913bb9456780 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 2.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4205 6880752a35614c364e12913bb9456780 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu4205 6880752a35614c364e12913bb9456780 215 Gene3D G3DSA:1.10.10.60 2 65 1.6E-26 T 14-10-2018 Atu1572 0720d0c6f0bcb8cc38f42767d673b36d 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1572 0720d0c6f0bcb8cc38f42767d673b36d 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1572 0720d0c6f0bcb8cc38f42767d673b36d 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1572 0720d0c6f0bcb8cc38f42767d673b36d 258 SUPERFAMILY SSF53474 10 242 4.52E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1572 0720d0c6f0bcb8cc38f42767d673b36d 258 Gene3D G3DSA:3.40.50.1820 11 256 5.4E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1572 0720d0c6f0bcb8cc38f42767d673b36d 258 Pfam PF00561 alpha/beta hydrolase fold 30 131 8.0E-25 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu0069 a20695bc0e11ea1da1313e86d2f7642f 132 PIRSF PIRSF005087 1 132 4.9E-50 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI Atu0069 a20695bc0e11ea1da1313e86d2f7642f 132 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 32.001 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial Atu0069 a20695bc0e11ea1da1313e86d2f7642f 132 Gene3D G3DSA:3.40.50.360 3 132 1.9E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu0069 a20695bc0e11ea1da1313e86d2f7642f 132 SUPERFAMILY SSF52218 2 131 3.09E-23 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu0069 a20695bc0e11ea1da1313e86d2f7642f 132 Pfam PF07972 NrdI Flavodoxin like 5 123 4.1E-45 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI Atu0069 a20695bc0e11ea1da1313e86d2f7642f 132 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 8.5E-48 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 SMART SM00354 8 81 7.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 Gene3D G3DSA:1.10.260.40 10 69 1.8E-14 T 14-10-2018 Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 SUPERFAMILY SSF53822 69 333 1.5E-26 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 Pfam PF13407 Periplasmic binding protein domain 72 273 1.2E-8 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 58 2.4E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 SUPERFAMILY SSF47413 10 66 1.13E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 Gene3D G3DSA:3.40.50.2300 70 157 1.2E-12 T 14-10-2018 Atu4743 c6038e48b2e8f847fb5214d0e110b468 359 Gene3D G3DSA:3.40.50.2300 161 338 6.2E-19 T 14-10-2018 Atu0016 8b5459e34e44e9d973211c37664a8d9d 255 Pfam PF01863 Protein of unknown function DUF45 43 245 5.4E-58 T 14-10-2018 IPR002725 Protein of unknown function DUF45 Atu0016 8b5459e34e44e9d973211c37664a8d9d 255 Gene3D G3DSA:3.30.2010.10 159 248 2.3E-13 T 14-10-2018 Atu3570 f5e2b555a2d2dae4f87009bb08dea769 398 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 56 374 4.1E-49 T 14-10-2018 IPR003776 YcaO-like domain Atu3570 f5e2b555a2d2dae4f87009bb08dea769 398 Gene3D G3DSA:1.10.490.140 145 254 2.8E-11 T 14-10-2018 Atu3570 f5e2b555a2d2dae4f87009bb08dea769 398 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 20 301 1.1E-38 T 14-10-2018 IPR003776 YcaO-like domain Atu4595 991ce18374c24d7f049e173380d1463b 249 SUPERFAMILY SSF51735 5 246 3.39E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4595 991ce18374c24d7f049e173380d1463b 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 1.3E-50 T 14-10-2018 Atu4595 991ce18374c24d7f049e173380d1463b 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4595 991ce18374c24d7f049e173380d1463b 249 Gene3D G3DSA:3.40.50.720 2 248 2.5E-69 T 14-10-2018 Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.3E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4595 991ce18374c24d7f049e173380d1463b 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4126 7d42b753eb65bfcc0170b7499af42a90 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 2.3E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5548 e9fd911fda87f9483fc79a59e6d24f0e 189 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 46 136 3.3E-11 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu5548 e9fd911fda87f9483fc79a59e6d24f0e 189 Gene3D G3DSA:2.30.110.10 34 166 2.7E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu5548 e9fd911fda87f9483fc79a59e6d24f0e 189 SUPERFAMILY SSF50475 46 163 3.05E-12 T 14-10-2018 Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 SUPERFAMILY SSF52540 338 544 8.12E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 Pfam PF00005 ABC transporter 360 494 1.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 Gene3D G3DSA:3.40.50.300 334 553 3.8E-57 T 14-10-2018 Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 Gene3D G3DSA:1.20.1560.10 12 326 7.8E-13 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 SMART SM00382 369 541 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4090 aebb78a6675ad9e0a4d3a79313968fa8 563 SUPERFAMILY SSF90123 17 322 1.03E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu1358 716d44c7dc300f3d9d6e2da5ad4d07bc 169 Gene3D G3DSA:3.40.50.1240 1 169 4.1E-49 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu1358 716d44c7dc300f3d9d6e2da5ad4d07bc 169 SUPERFAMILY SSF53254 6 152 4.12E-24 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu1358 716d44c7dc300f3d9d6e2da5ad4d07bc 169 SMART SM00855 8 120 6.9E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu1358 716d44c7dc300f3d9d6e2da5ad4d07bc 169 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 76 1.3E-8 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu3669 ef46c4ff8e7022125f3c59a1e8a735f8 453 Pfam PF01554 MatE 251 411 9.4E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu3669 ef46c4ff8e7022125f3c59a1e8a735f8 453 Pfam PF01554 MatE 27 173 2.6E-14 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu3669 ef46c4ff8e7022125f3c59a1e8a735f8 453 PIRSF PIRSF006603 9 452 7.6E-58 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu3097 d0b66251d988a482b49561c976ced69d 296 Gene3D G3DSA:1.10.3720.10 51 294 2.5E-52 T 14-10-2018 IPR035906 MetI-like superfamily Atu3097 d0b66251d988a482b49561c976ced69d 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 291 5.0E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3097 d0b66251d988a482b49561c976ced69d 296 SUPERFAMILY SSF161098 55 284 1.26E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 SUPERFAMILY SSF100950 77 233 1.61E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 Gene3D G3DSA:3.30.750.70 70 127 3.9E-5 T 14-10-2018 Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 SMART SM01134 72 233 2.2E-69 T 14-10-2018 Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.3E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 SMART SM00420 6 58 1.6E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 SUPERFAMILY SSF46785 3 69 2.87E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3898 f1aa98a4eefef7a3edfc968e39b6aaae 257 Pfam PF00455 DeoR C terminal sensor domain 76 232 1.6E-52 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Atu2593 839a0d38ec79da5def800a6114927a86 246 Pfam PF03932 CutC family 1 199 2.8E-68 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 Atu2593 839a0d38ec79da5def800a6114927a86 246 SUPERFAMILY SSF110395 1 239 4.71E-62 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Atu2593 839a0d38ec79da5def800a6114927a86 246 Gene3D G3DSA:3.20.20.380 1 240 8.7E-77 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Atu2593 839a0d38ec79da5def800a6114927a86 246 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 202 30.52 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 Atu3150 8a7ba958392a10426057be12a837c6fa 286 Gene3D G3DSA:1.10.3720.10 45 285 8.0E-65 T 14-10-2018 IPR035906 MetI-like superfamily Atu3150 8a7ba958392a10426057be12a837c6fa 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 279 8.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3150 8a7ba958392a10426057be12a837c6fa 286 SUPERFAMILY SSF161098 50 277 2.35E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu4035 a009cb2576ebdb8bde260fd768416c43 240 SUPERFAMILY SSF52172 1 123 3.13E-19 T 14-10-2018 IPR011006 CheY-like superfamily Atu4035 a009cb2576ebdb8bde260fd768416c43 240 Gene3D G3DSA:1.10.10.10 146 221 1.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4035 a009cb2576ebdb8bde260fd768416c43 240 SMART SM00421 145 211 3.7E-4 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4035 a009cb2576ebdb8bde260fd768416c43 240 SUPERFAMILY SSF46894 144 193 2.01E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4035 a009cb2576ebdb8bde260fd768416c43 240 Pfam PF00072 Response regulator receiver domain 3 119 3.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4035 a009cb2576ebdb8bde260fd768416c43 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 194 5.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4035 a009cb2576ebdb8bde260fd768416c43 240 SMART SM00448 1 119 3.0E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4035 a009cb2576ebdb8bde260fd768416c43 240 Gene3D G3DSA:3.40.50.2300 1 130 3.2E-21 T 14-10-2018 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 SUPERFAMILY SSF51569 6 286 1.47E-55 T 14-10-2018 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 SMART SM01130 3 289 1.1E-52 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 Gene3D G3DSA:3.20.20.70 1 294 3.1E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 Pfam PF00701 Dihydrodipicolinate synthetase family 6 282 9.1E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 9.7E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 9.7E-6 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu2503 4114a6b9022c9dc3c50e667573c20d61 294 PIRSF PIRSF001365 1 294 1.2E-62 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 Gene3D G3DSA:3.30.1490.20 149 213 6.0E-87 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 SUPERFAMILY SSF52440 1 130 1.35E-17 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 Gene3D G3DSA:3.30.470.20 126 310 6.0E-87 T 14-10-2018 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 SUPERFAMILY SSF56059 135 328 3.35E-44 T 14-10-2018 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 135 314 5.8E-60 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 Gene3D G3DSA:3.40.50.20 19 125 6.0E-87 T 14-10-2018 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 Hamap MF_00162 Glutathione synthetase [gshB]. 1 333 90.662 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu4147 9c8a2b1a953a65a7ac7d06b62227ea84 348 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 130 1.1E-15 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 Pfam PF01909 Nucleotidyltransferase domain 39 86 8.2E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 SUPERFAMILY SSF81301 13 129 3.04E-15 T 14-10-2018 Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 Gene3D G3DSA:1.20.120.330 153 303 2.2E-49 T 14-10-2018 Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 Pfam PF05168 HEPN domain 170 285 9.8E-6 T 14-10-2018 IPR007842 HEPN domain Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 SUPERFAMILY SSF81593 172 270 1.49E-6 T 14-10-2018 Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 SMART SM00748 170 290 2.8E-36 T 14-10-2018 IPR007842 HEPN domain Atu4860 a3af05d6dc3b849ee9f7bb112689eb69 311 Gene3D G3DSA:3.30.460.10 11 140 4.9E-14 T 14-10-2018 Atu0929 9d0fbeba2433ded0ed005a3ae3f3141b 435 Gene3D G3DSA:3.40.710.10 114 406 2.7E-108 T 14-10-2018 Atu0929 9d0fbeba2433ded0ed005a3ae3f3141b 435 Pfam PF00144 Beta-lactamase 122 407 2.6E-30 T 14-10-2018 IPR001466 Beta-lactamase-related Atu0929 9d0fbeba2433ded0ed005a3ae3f3141b 435 SUPERFAMILY SSF56601 54 428 5.33E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu0929 9d0fbeba2433ded0ed005a3ae3f3141b 435 Gene3D G3DSA:1.20.58.710 167 273 2.7E-108 T 14-10-2018 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 SUPERFAMILY SSF51735 1 133 1.35E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 SUPERFAMILY SSF55347 117 291 1.23E-31 T 14-10-2018 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 43 102 2.4E-8 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 310 53.37 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 112 128 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 Gene3D G3DSA:3.40.50.720 19 120 2.0E-18 T 14-10-2018 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 308 4.0E-128 T 14-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 SMART SM00859 4 106 5.2E-12 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atu1244 2e6fca88cbf7a5938eda8a21e36e941c 310 Gene3D G3DSA:3.30.360.10 121 295 3.2E-31 T 14-10-2018 Atu2221 400cb3762856c2e24e4e9cd6488fb228 95 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 12 87 5.0E-37 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atu2221 400cb3762856c2e24e4e9cd6488fb228 95 PIRSF PIRSF028440 1 95 5.3E-50 T 14-10-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis Atu2221 400cb3762856c2e24e4e9cd6488fb228 95 SMART SM01259 15 86 8.0E-43 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atu2221 400cb3762856c2e24e4e9cd6488fb228 95 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 16 85 2.7E-31 T 14-10-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atu5384 b78d6732e2a0055c86f3758ddad4d954 787 SUPERFAMILY SSF56349 566 772 1.93E-5 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu5384 b78d6732e2a0055c86f3758ddad4d954 787 Gene3D G3DSA:1.10.443.10 539 781 4.6E-8 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu4503 7befb3fc894dd82966bd288624de7876 266 Pfam PF02633 Creatinine amidohydrolase 21 250 8.8E-52 T 14-10-2018 IPR003785 Creatininase/formamide hydrolase KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 Atu4503 7befb3fc894dd82966bd288624de7876 266 SUPERFAMILY SSF102215 17 256 1.83E-67 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 Atu4503 7befb3fc894dd82966bd288624de7876 266 Gene3D G3DSA:3.40.50.10310 18 256 1.0E-54 T 14-10-2018 IPR024087 Creatininase-like superfamily KEGG: 00740+3.5.1.102|MetaCyc: PWY-6167 Atu0842 cd76fee4363c96d69d530eadf3f65230 262 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 109 159 5.8E-9 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif Atu0842 cd76fee4363c96d69d530eadf3f65230 262 SUPERFAMILY SSF53448 52 223 4.87E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0842 cd76fee4363c96d69d530eadf3f65230 262 Gene3D G3DSA:3.90.550.20 89 250 2.7E-10 T 14-10-2018 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 Pfam PF00549 CoA-ligase 272 391 4.9E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 Gene3D G3DSA:3.30.470.20 1 244 4.9E-82 T 14-10-2018 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 PIRSF PIRSF001554 1 397 1.8E-139 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 Gene3D G3DSA:3.30.1490.20 21 114 4.9E-82 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 SUPERFAMILY SSF52210 251 395 1.83E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 5.8E-146 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 SUPERFAMILY SSF56059 1 248 7.29E-70 T 14-10-2018 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 Gene3D G3DSA:3.40.50.261 250 397 2.4E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 40.682 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu2638 f70012ffcb94e82af9dc306c10e9140d 397 Pfam PF08442 ATP-grasp domain 2 212 6.6E-65 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Atu0552 47bdcc29c545c770f821b126a0a18b16 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 255 2.8E-25 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atu0552 47bdcc29c545c770f821b126a0a18b16 262 Pfam PF00460 Flagella basal body rod protein 5 34 8.1E-13 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atu0552 47bdcc29c545c770f821b126a0a18b16 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 1.4E-109 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Atu0552 47bdcc29c545c770f821b126a0a18b16 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atu0552 47bdcc29c545c770f821b126a0a18b16 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 7.0E-31 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atu0552 47bdcc29c545c770f821b126a0a18b16 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 7.3E-48 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atu0552 47bdcc29c545c770f821b126a0a18b16 262 SUPERFAMILY SSF117143 93 222 4.32E-35 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Atu1388 baa36fe2274c6cf8bc18ff398ee63902 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Atu1388 baa36fe2274c6cf8bc18ff398ee63902 261 Gene3D G3DSA:3.40.190.10 31 248 1.2E-55 T 14-10-2018 Atu1388 baa36fe2274c6cf8bc18ff398ee63902 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 4.2E-51 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1388 baa36fe2274c6cf8bc18ff398ee63902 261 SMART SM00062 36 256 1.8E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1388 baa36fe2274c6cf8bc18ff398ee63902 261 Gene3D G3DSA:3.40.190.10 123 214 1.2E-55 T 14-10-2018 Atu1388 baa36fe2274c6cf8bc18ff398ee63902 261 SUPERFAMILY SSF53850 8 256 4.76E-55 T 14-10-2018 Atu3527 85b24a21ed75a92ed97703ccf0c88be8 280 Pfam PF04909 Amidohydrolase 53 277 1.8E-40 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu3527 85b24a21ed75a92ed97703ccf0c88be8 280 SUPERFAMILY SSF51556 2 277 9.9E-63 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3527 85b24a21ed75a92ed97703ccf0c88be8 280 Gene3D G3DSA:3.20.20.140 2 279 3.3E-67 T 14-10-2018 Atu4429 7a0d4ceb0143a5ac18dfe57d391e8670 235 Pfam PF00156 Phosphoribosyl transferase domain 68 205 6.4E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu4429 7a0d4ceb0143a5ac18dfe57d391e8670 235 SUPERFAMILY SSF53271 70 229 7.21E-22 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu4429 7a0d4ceb0143a5ac18dfe57d391e8670 235 Gene3D G3DSA:3.40.50.2020 40 211 9.9E-30 T 14-10-2018 Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 203 6.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 203 218 6.5E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 Gene3D G3DSA:2.60.120.10 41 158 2.2E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 ProSitePatterns PS00042 Crp-type HTH domain signature. 189 212 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 SMART SM00100 27 145 3.1E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 SUPERFAMILY SSF46785 159 238 9.52E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 SUPERFAMILY SSF51206 22 157 3.54E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 Pfam PF13545 Crp-like helix-turn-helix domain 162 236 3.6E-19 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 Gene3D G3DSA:1.10.10.10 159 241 1.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 SMART SM00419 181 230 4.8E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu1602 5e1313e76fddf7f0ecee5e763f0c2057 241 Pfam PF00027 Cyclic nucleotide-binding domain 46 127 4.4E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu0419 4011be10664b50211f975319186b1ac6 433 Gene3D G3DSA:3.30.565.10 283 433 3.0E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0419 4011be10664b50211f975319186b1ac6 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 432 2.6E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0419 4011be10664b50211f975319186b1ac6 433 SMART SM00387 324 433 7.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0419 4011be10664b50211f975319186b1ac6 433 SUPERFAMILY SSF47384 198 276 5.3E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0419 4011be10664b50211f975319186b1ac6 433 SUPERFAMILY SSF55874 267 433 3.54E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0419 4011be10664b50211f975319186b1ac6 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 433 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0419 4011be10664b50211f975319186b1ac6 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0419 4011be10664b50211f975319186b1ac6 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0419 4011be10664b50211f975319186b1ac6 433 Gene3D G3DSA:1.10.287.130 204 277 5.4E-25 T 14-10-2018 Atu0419 4011be10664b50211f975319186b1ac6 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 276 7.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0419 4011be10664b50211f975319186b1ac6 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 433 4.6E-113 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Atu0419 4011be10664b50211f975319186b1ac6 433 SMART SM00388 211 278 1.3E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0419 4011be10664b50211f975319186b1ac6 433 SUPERFAMILY SSF55785 111 209 1.24E-5 T 14-10-2018 IPR035965 PAS domain superfamily Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 Pfam PF13426 PAS domain 148 246 2.4E-10 T 14-10-2018 IPR000014 PAS domain Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SUPERFAMILY SSF55785 21 122 6.46E-25 T 14-10-2018 IPR035965 PAS domain superfamily Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SMART SM00091 132 200 0.14 T 14-10-2018 IPR000014 PAS domain Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SMART SM00091 9 79 0.023 T 14-10-2018 IPR000014 PAS domain Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 254 3.7E-10 T 14-10-2018 IPR000014 PAS domain Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 128 1.1E-17 T 14-10-2018 IPR000014 PAS domain Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SUPERFAMILY SSF58104 267 546 1.05E-64 T 14-10-2018 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 5.9E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 5.9E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 423 5.9E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 502 5.9E-42 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SUPERFAMILY SSF55785 143 248 6.7E-21 T 14-10-2018 IPR035965 PAS domain superfamily Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SMART SM00283 298 545 6.2E-88 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 Gene3D G3DSA:1.10.287.950 247 547 1.8E-72 T 14-10-2018 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 512 1.9E-47 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 Gene3D G3DSA:3.30.450.20 145 245 1.5E-19 T 14-10-2018 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 Gene3D G3DSA:3.30.450.20 8 144 6.1E-24 T 14-10-2018 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 Pfam PF08447 PAS fold 34 119 1.7E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SMART SM00086 205 247 9.8 T 14-10-2018 IPR001610 PAC motif Atu3363 6d04a10cd997cea6a0ff96efbe82931d 578 SMART SM00086 84 125 3.8E-5 T 14-10-2018 IPR001610 PAC motif Atu4401 a4bbc7e152aa31258acf894098c64cbe 327 PIRSF PIRSF027386 3 327 2.0E-79 T 14-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type Atu4401 a4bbc7e152aa31258acf894098c64cbe 327 Pfam PF13379 NMT1-like family 76 268 4.0E-9 T 14-10-2018 Atu4401 a4bbc7e152aa31258acf894098c64cbe 327 SUPERFAMILY SSF53850 44 314 5.05E-26 T 14-10-2018 Atu4401 a4bbc7e152aa31258acf894098c64cbe 327 Gene3D G3DSA:3.40.190.10 60 324 2.7E-50 T 14-10-2018 Atu4401 a4bbc7e152aa31258acf894098c64cbe 327 Gene3D G3DSA:3.40.190.10 111 223 2.7E-50 T 14-10-2018 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 PRINTS PR00340 P-II protein signature 2 17 6.4E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 PRINTS PR00340 P-II protein signature 83 103 6.4E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 PRINTS PR00340 P-II protein signature 23 41 6.4E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 PRINTS PR00340 P-II protein signature 52 75 6.4E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.7E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 SMART SM00938 4 105 5.8E-67 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 PIRSF PIRSF039144 1 112 7.4E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 SUPERFAMILY SSF54913 1 112 5.56E-46 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atu1769 a72e3a5e5a1c72cf04f5a9b49a8c7b1c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Atu4514 e59b93a6d55f004ac0b1a966ea481687 271 Pfam PF01380 SIS domain 140 263 1.4E-19 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu4514 e59b93a6d55f004ac0b1a966ea481687 271 Gene3D G3DSA:3.40.50.10490 107 271 7.7E-30 T 14-10-2018 Atu4514 e59b93a6d55f004ac0b1a966ea481687 271 SUPERFAMILY SSF53697 119 264 8.09E-24 T 14-10-2018 Atu4514 e59b93a6d55f004ac0b1a966ea481687 271 SUPERFAMILY SSF46689 13 88 2.69E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4514 e59b93a6d55f004ac0b1a966ea481687 271 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 77 5.0E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Atu4514 e59b93a6d55f004ac0b1a966ea481687 271 Gene3D G3DSA:1.10.10.10 9 84 7.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 Gene3D G3DSA:3.40.1160.10 2 273 1.1E-80 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 Pfam PF00696 Amino acid kinase family 13 241 2.8E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 Gene3D G3DSA:2.30.130.10 274 373 4.4E-31 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 Pfam PF01472 PUA domain 283 356 1.1E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 SUPERFAMILY SSF53633 13 256 1.7E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 SUPERFAMILY SSF88697 283 372 2.32E-24 T 14-10-2018 IPR015947 PUA-like superfamily Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 265 35.225 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 PIRSF PIRSF000729 8 374 6.5E-122 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 TIGRFAM TIGR01027 proB: glutamate 5-kinase 13 371 8.8E-121 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 SMART SM00359 283 365 7.1E-15 T 14-10-2018 IPR002478 PUA domain GO:0003723 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 2.7E-46 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 2.7E-46 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 2.7E-46 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 2.7E-46 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu2780 665bd252459dd9c8c9cfb76ff9173188 389 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 2.7E-46 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Atu1597 6fce14d55e19579d4187d4c88a08eb65 398 SUPERFAMILY SSF53901 233 370 1.07E-11 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1597 6fce14d55e19579d4187d4c88a08eb65 398 SUPERFAMILY SSF53901 5 261 5.21E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1597 6fce14d55e19579d4187d4c88a08eb65 398 Gene3D G3DSA:3.40.47.10 7 268 1.1E-36 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1597 6fce14d55e19579d4187d4c88a08eb65 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 253 7.9E-19 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu5474 7b5fd86999bc70331e7df13c034d7e5d 311 SUPERFAMILY SSF51735 98 276 1.47E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5474 7b5fd86999bc70331e7df13c034d7e5d 311 Gene3D G3DSA:3.40.50.720 16 311 2.9E-114 T 14-10-2018 Atu5474 7b5fd86999bc70331e7df13c034d7e5d 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 276 7.4E-45 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu5474 7b5fd86999bc70331e7df13c034d7e5d 311 SUPERFAMILY SSF52283 30 122 1.62E-7 T 14-10-2018 Atu5474 7b5fd86999bc70331e7df13c034d7e5d 311 Gene3D G3DSA:3.40.50.720 95 277 2.9E-114 T 14-10-2018 Atu3372 3d230d04d6e6e33e81df19e92bdaf9ee 309 SUPERFAMILY SSF53822 22 306 1.94E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3372 3d230d04d6e6e33e81df19e92bdaf9ee 309 Pfam PF13407 Periplasmic binding protein domain 23 285 6.7E-57 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3372 3d230d04d6e6e33e81df19e92bdaf9ee 309 Gene3D G3DSA:3.40.50.2300 23 295 1.2E-86 T 14-10-2018 Atu3372 3d230d04d6e6e33e81df19e92bdaf9ee 309 Gene3D G3DSA:3.40.50.2300 128 302 1.2E-86 T 14-10-2018 Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 Gene3D G3DSA:3.30.70.360 177 299 1.9E-87 T 14-10-2018 Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 SUPERFAMILY SSF53187 8 382 6.0E-59 T 14-10-2018 Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 SUPERFAMILY SSF55031 177 289 9.12E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 14 370 6.4E-67 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 Pfam PF01546 Peptidase family M20/M25/M40 72 379 2.2E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 Gene3D G3DSA:3.40.630.10 15 370 1.9E-87 T 14-10-2018 Atu5479 44b235ca26d8f4c138c7845db4ee6728 387 Pfam PF07687 Peptidase dimerisation domain 174 281 4.3E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 PIRSF PIRSF000505 1 417 7.8E-130 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 Gene3D G3DSA:3.65.10.10 15 403 2.2E-110 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 413 26.827 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 3.9E-89 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 411 1.8E-100 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 SUPERFAMILY SSF55205 4 413 4.25E-99 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Atu0642 7101e5afd43222e5d6f6f0c98b096c94 425 Gene3D G3DSA:3.65.10.10 23 242 2.2E-110 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 1.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 SMART SM00345 19 77 4.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 6.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 6.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 SUPERFAMILY SSF46785 14 81 9.91E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 SMART SM00895 87 213 8.2E-9 T 14-10-2018 IPR011711 GntR, C-terminal Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 Gene3D G3DSA:1.20.120.530 84 220 6.2E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 Pfam PF07729 FCD domain 92 212 9.3E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 Gene3D G3DSA:1.10.10.10 2 78 2.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4674 c4a345f2cf7b55e9b7dc29f34db4df64 232 SUPERFAMILY SSF48008 98 220 1.18E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu8093 66845f10fbf187e5c333e25151c62bd6 389 SUPERFAMILY SSF52266 7 226 7.0E-21 T 14-10-2018 Atu8093 66845f10fbf187e5c333e25151c62bd6 389 Gene3D G3DSA:3.40.50.1110 5 234 2.2E-22 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Atu8093 66845f10fbf187e5c333e25151c62bd6 389 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 79 214 6.7E-13 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Atu6051 bc969222db992f874f66b649035f46c7 194 Pfam PF08808 RES domain 34 173 3.8E-20 T 14-10-2018 IPR014914 RES domain Atu6051 bc969222db992f874f66b649035f46c7 194 SMART SM00953 31 168 5.3E-10 T 14-10-2018 IPR014914 RES domain Atu2388 a93f7abdacd94d33f2cf10ef2abf71d0 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2388 a93f7abdacd94d33f2cf10ef2abf71d0 264 Gene3D G3DSA:3.40.50.300 7 253 1.1E-59 T 14-10-2018 Atu2388 a93f7abdacd94d33f2cf10ef2abf71d0 264 SUPERFAMILY SSF52540 13 239 7.15E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2388 a93f7abdacd94d33f2cf10ef2abf71d0 264 SMART SM00382 38 221 9.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2388 a93f7abdacd94d33f2cf10ef2abf71d0 264 Pfam PF00005 ABC transporter 29 170 2.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 5 436 2.5E-207 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 Hamap MF_00455 Xylose isomerase [xylA]. 12 436 53.539 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 Gene3D G3DSA:3.20.20.150 4 436 3.6E-175 T 14-10-2018 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 132 152 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 179 200 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 155 174 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 270 297 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 228 252 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 91 113 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 332 343 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 299 310 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 PRINTS PR00688 Xylose isomerase signature 206 225 5.6E-79 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Atu4483 ce5f80dc67eb53ed61c9cd0c3bb266af 436 SUPERFAMILY SSF51658 5 436 8.86E-169 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu5339 d9048820ca777dd7bd8735661afa6898 303 SUPERFAMILY SSF103481 39 141 1.14E-12 T 14-10-2018 Atu5339 d9048820ca777dd7bd8735661afa6898 303 SUPERFAMILY SSF103481 191 290 2.48E-13 T 14-10-2018 Atu5339 d9048820ca777dd7bd8735661afa6898 303 Pfam PF00892 EamA-like transporter family 5 138 2.1E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu5339 d9048820ca777dd7bd8735661afa6898 303 Pfam PF00892 EamA-like transporter family 153 284 1.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4435 89c30dd1282e359d0e2edece6871c791 249 Pfam PF00005 ABC transporter 20 167 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4435 89c30dd1282e359d0e2edece6871c791 249 Gene3D G3DSA:3.40.50.300 1 248 6.4E-72 T 14-10-2018 Atu4435 89c30dd1282e359d0e2edece6871c791 249 SMART SM00382 29 216 1.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4435 89c30dd1282e359d0e2edece6871c791 249 SUPERFAMILY SSF52540 5 224 3.66E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4435 89c30dd1282e359d0e2edece6871c791 249 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1571 3b38247ae8f84052546279a2247228ad 274 Pfam PF06426 Serine acetyltransferase, N-terminal 19 123 2.1E-35 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Atu1571 3b38247ae8f84052546279a2247228ad 274 SUPERFAMILY SSF51161 19 269 3.19E-65 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu1571 3b38247ae8f84052546279a2247228ad 274 Gene3D G3DSA:1.10.3130.10 1 152 1.2E-49 T 14-10-2018 Atu1571 3b38247ae8f84052546279a2247228ad 274 SMART SM00971 19 123 1.9E-58 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Atu1571 3b38247ae8f84052546279a2247228ad 274 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 92 252 9.9E-69 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Atu1571 3b38247ae8f84052546279a2247228ad 274 PIRSF PIRSF000441 86 270 4.5E-61 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Atu1571 3b38247ae8f84052546279a2247228ad 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 203 237 1.6E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1571 3b38247ae8f84052546279a2247228ad 274 Gene3D G3DSA:2.160.10.10 153 270 5.1E-37 T 14-10-2018 Atu1571 3b38247ae8f84052546279a2247228ad 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 212 240 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu0011 57bb6d451ca1911258c713c3f8ec2e4b 121 SMART SM00530 7 63 1.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0011 57bb6d451ca1911258c713c3f8ec2e4b 121 Gene3D G3DSA:1.10.260.40 2 67 1.1E-16 T 14-10-2018 Atu0011 57bb6d451ca1911258c713c3f8ec2e4b 121 SUPERFAMILY SSF47413 3 67 9.01E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu0011 57bb6d451ca1911258c713c3f8ec2e4b 121 Pfam PF01381 Helix-turn-helix 8 58 1.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu5482 bc201c1491a085dde13c67d6678ce08a 269 Gene3D G3DSA:3.40.190.10 31 253 3.4E-54 T 14-10-2018 Atu5482 bc201c1491a085dde13c67d6678ce08a 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 259 1.7E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu5482 bc201c1491a085dde13c67d6678ce08a 269 SUPERFAMILY SSF53850 1 259 3.18E-50 T 14-10-2018 Atu5482 bc201c1491a085dde13c67d6678ce08a 269 Gene3D G3DSA:3.40.190.10 119 221 3.4E-54 T 14-10-2018 Atu5482 bc201c1491a085dde13c67d6678ce08a 269 SMART SM00062 34 263 1.9E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu2216 09bfb9db1d72c1da8632495e3ebc6107 383 SUPERFAMILY SSF55920 151 380 3.53E-50 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu2216 09bfb9db1d72c1da8632495e3ebc6107 383 Gene3D G3DSA:3.90.230.10 151 380 5.6E-35 T 14-10-2018 Atu2216 09bfb9db1d72c1da8632495e3ebc6107 383 Pfam PF00557 Metallopeptidase family M24 161 366 1.9E-26 T 14-10-2018 IPR000994 Peptidase M24 Atu2216 09bfb9db1d72c1da8632495e3ebc6107 383 Gene3D G3DSA:3.40.350.10 1 150 2.6E-26 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2216 09bfb9db1d72c1da8632495e3ebc6107 383 SUPERFAMILY SSF53092 2 151 1.83E-30 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu2216 09bfb9db1d72c1da8632495e3ebc6107 383 Pfam PF01321 Creatinase/Prolidase N-terminal domain 13 152 6.7E-22 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Atu2560 286d5dd816b984db132bea9dd5cefecf 427 Gene3D G3DSA:3.30.9.10 124 345 2.2E-66 T 14-10-2018 Atu2560 286d5dd816b984db132bea9dd5cefecf 427 Gene3D G3DSA:3.50.50.60 31 384 2.2E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2560 286d5dd816b984db132bea9dd5cefecf 427 Pfam PF01266 FAD dependent oxidoreductase 31 382 1.3E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu2560 286d5dd816b984db132bea9dd5cefecf 427 SUPERFAMILY SSF51905 31 399 1.29E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0438 9c4af4694a7416228717dce81e582192 342 SUPERFAMILY SSF56349 58 312 7.06E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu0438 9c4af4694a7416228717dce81e582192 342 Gene3D G3DSA:1.10.443.10 165 328 6.2E-25 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu0438 9c4af4694a7416228717dce81e582192 342 Pfam PF00589 Phage integrase family 180 309 1.9E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atu0151 9ffbb4f5a336c4afe4ad158e17cd6d75 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 169 2.2E-91 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu0151 9ffbb4f5a336c4afe4ad158e17cd6d75 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 171 47.594 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu0151 9ffbb4f5a336c4afe4ad158e17cd6d75 171 Gene3D G3DSA:3.10.129.10 2 171 1.3E-59 T 14-10-2018 Atu0151 9ffbb4f5a336c4afe4ad158e17cd6d75 171 Pfam PF07977 FabA-like domain 29 158 3.8E-49 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu0151 9ffbb4f5a336c4afe4ad158e17cd6d75 171 SUPERFAMILY SSF54637 3 168 8.82E-55 T 14-10-2018 IPR029069 HotDog domain superfamily Atu4103 2992ef0f79751edbf4de7e3197e4143a 210 Pfam PF02224 Cytidylate kinase 5 196 8.5E-53 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Atu4103 2992ef0f79751edbf4de7e3197e4143a 210 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 197 6.9E-52 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Atu4103 2992ef0f79751edbf4de7e3197e4143a 210 SUPERFAMILY SSF52540 2 207 4.62E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4103 2992ef0f79751edbf4de7e3197e4143a 210 Hamap MF_00238 Cytidylate kinase [cmk]. 3 208 29.12 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Atu4103 2992ef0f79751edbf4de7e3197e4143a 210 Gene3D G3DSA:3.40.50.300 1 209 2.0E-60 T 14-10-2018 Atu3099 283ada4b0d29de798fea5228444debf4 373 Gene3D G3DSA:3.40.50.300 3 221 2.0E-65 T 14-10-2018 Atu3099 283ada4b0d29de798fea5228444debf4 373 Gene3D G3DSA:2.40.50.940 222 347 1.9E-27 T 14-10-2018 Atu3099 283ada4b0d29de798fea5228444debf4 373 Gene3D G3DSA:2.40.50.140 284 338 1.9E-27 T 14-10-2018 Atu3099 283ada4b0d29de798fea5228444debf4 373 SUPERFAMILY SSF50331 236 354 7.05E-24 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3099 283ada4b0d29de798fea5228444debf4 373 SMART SM00382 28 211 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3099 283ada4b0d29de798fea5228444debf4 373 Pfam PF00005 ABC transporter 19 161 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3099 283ada4b0d29de798fea5228444debf4 373 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3099 283ada4b0d29de798fea5228444debf4 373 SUPERFAMILY SSF52540 4 243 2.01E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3099 283ada4b0d29de798fea5228444debf4 373 Pfam PF08402 TOBE domain 277 346 8.6E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu3329 95a0076a3f326be09a441f1c5580f510 444 SUPERFAMILY SSF53383 12 441 1.55E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3329 95a0076a3f326be09a441f1c5580f510 444 Gene3D G3DSA:3.40.640.10 64 346 4.8E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3329 95a0076a3f326be09a441f1c5580f510 444 PIRSF PIRSF000521 19 150 0.019 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3329 95a0076a3f326be09a441f1c5580f510 444 PIRSF PIRSF000521 171 443 2.1E-17 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3329 95a0076a3f326be09a441f1c5580f510 444 Gene3D G3DSA:3.90.1150.10 27 435 4.8E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3329 95a0076a3f326be09a441f1c5580f510 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3329 95a0076a3f326be09a441f1c5580f510 444 Pfam PF00202 Aminotransferase class-III 29 440 2.4E-88 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3071 a856a622921f69b6ffbff6351dbd030e 161 Pfam PF12852 Cupin 39 118 1.1E-5 T 14-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Atu3071 a856a622921f69b6ffbff6351dbd030e 161 PIRSF PIRSF019307 1 161 8.5E-69 T 14-10-2018 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type Atu3071 a856a622921f69b6ffbff6351dbd030e 161 SUPERFAMILY SSF51182 21 126 3.27E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3071 a856a622921f69b6ffbff6351dbd030e 161 Gene3D G3DSA:2.60.120.10 24 131 1.8E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1542 3207b8b2e1aaa0d0a4b19fda67cbb92d 173 Gene3D G3DSA:3.40.50.300 7 172 2.5E-59 T 14-10-2018 Atu1542 3207b8b2e1aaa0d0a4b19fda67cbb92d 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 8 171 2.1E-62 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Atu1542 3207b8b2e1aaa0d0a4b19fda67cbb92d 173 PIRSF PIRSF006135 6 173 1.0E-58 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Atu1542 3207b8b2e1aaa0d0a4b19fda67cbb92d 173 SUPERFAMILY SSF52540 8 172 5.68E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3533 89c996b05db9e733e3355d7e429f9d54 346 Gene3D G3DSA:3.40.50.2300 43 312 3.8E-51 T 14-10-2018 Atu3533 89c996b05db9e733e3355d7e429f9d54 346 SUPERFAMILY SSF53822 38 323 5.98E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3533 89c996b05db9e733e3355d7e429f9d54 346 Gene3D G3DSA:3.40.50.2300 137 321 3.8E-51 T 14-10-2018 Atu3533 89c996b05db9e733e3355d7e429f9d54 346 Pfam PF13407 Periplasmic binding protein domain 38 286 2.0E-34 T 14-10-2018 IPR025997 Periplasmic binding protein Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 4 256 32.054 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 Pfam PF02735 Ku70/Ku80 beta-barrel domain 15 177 6.5E-33 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 Gene3D G3DSA:2.40.290.10 5 182 3.0E-14 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 TIGRFAM TIGR02772 Ku_bact: Ku protein 5 255 1.4E-83 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 PIRSF PIRSF006493 2 297 9.3E-120 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 SMART SM00559 56 185 5.8E-18 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Atu5049 4b25485d2d3e1daae0d5c4d0769bc14a 298 SUPERFAMILY SSF100939 4 258 2.35E-48 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Atu5450 a4bc78ea382a236b4abb47f856672ce4 99 Pfam PF06169 Protein of unknown function (DUF982) 8 78 1.0E-17 T 14-10-2018 IPR010385 Protein of unknown function DUF982 Atu1433 ee491a793d96b13cd618ce29e77a543a 214 SUPERFAMILY SSF52266 4 209 1.83E-28 T 14-10-2018 Atu1433 ee491a793d96b13cd618ce29e77a543a 214 Gene3D G3DSA:3.40.50.1110 1 214 1.9E-78 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Atu1433 ee491a793d96b13cd618ce29e77a543a 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 192 2.8E-20 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 SUPERFAMILY SSF51735 115 273 3.68E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 Pfam PF00107 Zinc-binding dehydrogenase 149 267 2.1E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 Gene3D G3DSA:3.90.180.10 10 310 3.4E-85 T 14-10-2018 Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 SUPERFAMILY SSF50129 1 142 1.19E-30 T 14-10-2018 IPR011032 GroES-like superfamily Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 Gene3D G3DSA:3.40.50.720 121 263 3.4E-85 T 14-10-2018 Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 SMART SM00829 10 317 1.4E-27 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu4870 0e8d8d7a0df7e0f0580ad09649f1dcdc 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 85 3.4E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 Gene3D G3DSA:3.40.710.10 316 658 1.2E-114 T 14-10-2018 Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 Gene3D G3DSA:1.10.3810.10 116 313 1.8E-74 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 SUPERFAMILY SSF56601 278 654 1.63E-120 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 SUPERFAMILY SSF53955 112 318 1.15E-73 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 135 651 1.9E-187 T 14-10-2018 Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 Pfam PF00905 Penicillin binding protein transpeptidase domain 389 614 1.0E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu0103 3fbfa1e9af0577279bc8ea7376d2e3ce 764 Pfam PF00912 Transglycosylase 130 296 4.5E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 SUPERFAMILY SSF52317 10 196 2.72E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 SUPERFAMILY SSF46689 268 319 1.84E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 Pfam PF01965 DJ-1/PfpI family 70 176 1.1E-9 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 SUPERFAMILY SSF46689 215 266 3.32E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 Pfam PF12833 Helix-turn-helix domain 238 317 7.8E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 SMART SM00342 232 315 2.4E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 Gene3D G3DSA:1.10.10.60 216 323 2.8E-27 T 14-10-2018 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 299 3.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 315 3.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3462 8e31edcad0f4f7d26b858d50e5727ebb 327 Gene3D G3DSA:3.40.50.880 6 204 8.8E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 SUPERFAMILY SSF48008 91 232 3.4E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 82 1.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 Gene3D G3DSA:1.10.10.10 14 84 5.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 SUPERFAMILY SSF46785 17 87 2.73E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 Gene3D G3DSA:1.20.120.530 89 235 4.4E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 SMART SM00895 93 227 3.9E-15 T 14-10-2018 IPR011711 GntR, C-terminal Atu5404 b547a09e06aa0b89b6a81fc5934d2df7 235 Pfam PF07729 FCD domain 93 226 1.6E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu0602 6c900948c38ed9128e691990de6b9d55 479 Gene3D G3DSA:3.30.590.10 145 477 6.1E-101 T 14-10-2018 Atu0602 6c900948c38ed9128e691990de6b9d55 479 SMART SM01230 142 398 1.0E-108 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0602 6c900948c38ed9128e691990de6b9d55 479 SUPERFAMILY SSF54368 34 140 2.62E-18 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0602 6c900948c38ed9128e691990de6b9d55 479 Gene3D G3DSA:3.10.20.70 33 143 7.0E-8 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0602 6c900948c38ed9128e691990de6b9d55 479 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 278 293 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu0602 6c900948c38ed9128e691990de6b9d55 479 SUPERFAMILY SSF55931 143 476 1.37E-106 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu0602 6c900948c38ed9128e691990de6b9d55 479 Pfam PF00120 Glutamine synthetase, catalytic domain 144 473 4.6E-102 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0479 b112704bd9b56007337d2be40e85eb44 253 SMART SM00062 21 251 2.2E-36 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu0479 b112704bd9b56007337d2be40e85eb44 253 SUPERFAMILY SSF53850 21 251 5.59E-47 T 14-10-2018 Atu0479 b112704bd9b56007337d2be40e85eb44 253 Gene3D G3DSA:3.40.190.10 26 247 1.0E-45 T 14-10-2018 Atu0479 b112704bd9b56007337d2be40e85eb44 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 249 1.5E-42 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu0479 b112704bd9b56007337d2be40e85eb44 253 Gene3D G3DSA:3.40.190.10 110 208 1.0E-45 T 14-10-2018 Atu0255 6638fd0e80fb4094974d24f8358366db 67 Pfam PF01632 Ribosomal protein L35 2 60 5.0E-19 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0255 6638fd0e80fb4094974d24f8358366db 67 Gene3D G3DSA:2.40.50.530 2 67 1.0E-21 T 14-10-2018 Atu0255 6638fd0e80fb4094974d24f8358366db 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu0255 6638fd0e80fb4094974d24f8358366db 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.317 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atu0255 6638fd0e80fb4094974d24f8358366db 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.4E-10 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atu0255 6638fd0e80fb4094974d24f8358366db 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.4E-10 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atu0255 6638fd0e80fb4094974d24f8358366db 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.4E-10 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atu0255 6638fd0e80fb4094974d24f8358366db 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.4E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Atu0255 6638fd0e80fb4094974d24f8358366db 67 SUPERFAMILY SSF143034 2 60 2.75E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu6180 658142b53f63c9f940db6c8a7dac70d5 231 PIRSF PIRSF009320 1 200 1.8E-29 T 14-10-2018 Atu6180 658142b53f63c9f940db6c8a7dac70d5 231 Gene3D G3DSA:3.40.50.300 1 218 2.4E-28 T 14-10-2018 Atu6180 658142b53f63c9f940db6c8a7dac70d5 231 SUPERFAMILY SSF52540 1 194 5.76E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6180 658142b53f63c9f940db6c8a7dac70d5 231 Pfam PF07015 VirC1 protein 1 230 7.9E-126 T 14-10-2018 IPR009744 VirC1 Atu6180 658142b53f63c9f940db6c8a7dac70d5 231 ProDom PD023318 PLASMID VIRC1 CROWN TUMOR GALL TIORF154 RIORF166 47 230 1.0E-89 T 14-10-2018 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 Pfam PF00672 HAMP domain 207 251 5.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 Gene3D G3DSA:1.10.8.500 208 258 1.5E-15 T 14-10-2018 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 SUPERFAMILY SSF58104 336 620 1.44E-69 T 14-10-2018 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 SUPERFAMILY SSF158472 207 255 4.32E-10 T 14-10-2018 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 584 5.0E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 Gene3D G3DSA:1.10.287.950 317 618 1.3E-77 T 14-10-2018 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 SMART SM00304 207 260 3.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 SMART SM00304 316 368 2.2 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0387 09a48fee8560ec0cd2489654aeca272d 682 SMART SM00283 369 616 6.2E-100 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu5065 f6e0d83cb07d618c7af5f75743df3d34 273 Pfam PF00561 alpha/beta hydrolase fold 22 255 2.2E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5065 f6e0d83cb07d618c7af5f75743df3d34 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.2E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5065 f6e0d83cb07d618c7af5f75743df3d34 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.2E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5065 f6e0d83cb07d618c7af5f75743df3d34 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 1.2E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5065 f6e0d83cb07d618c7af5f75743df3d34 273 Gene3D G3DSA:3.40.50.1820 2 273 3.9E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5065 f6e0d83cb07d618c7af5f75743df3d34 273 SUPERFAMILY SSF53474 2 271 5.59E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2110 2d0c7c3ca1a8a922165bc44a16dbc1b3 396 Pfam PF01266 FAD dependent oxidoreductase 7 374 1.3E-29 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu2110 2d0c7c3ca1a8a922165bc44a16dbc1b3 396 Gene3D G3DSA:3.50.50.60 7 381 8.0E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2110 2d0c7c3ca1a8a922165bc44a16dbc1b3 396 SUPERFAMILY SSF51905 5 384 2.59E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2110 2d0c7c3ca1a8a922165bc44a16dbc1b3 396 Gene3D G3DSA:3.30.9.10 66 338 8.0E-66 T 14-10-2018 Atu2110 2d0c7c3ca1a8a922165bc44a16dbc1b3 396 SUPERFAMILY SSF54373 226 337 1.73E-13 T 14-10-2018 Atu2142 4b510de6b814200c7f10e28b1f7ddb6b 454 SUPERFAMILY SSF54368 7 114 1.7E-18 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2142 4b510de6b814200c7f10e28b1f7ddb6b 454 Gene3D G3DSA:3.10.20.70 3 114 1.9E-6 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2142 4b510de6b814200c7f10e28b1f7ddb6b 454 SUPERFAMILY SSF55931 116 452 9.42E-110 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu2142 4b510de6b814200c7f10e28b1f7ddb6b 454 Gene3D G3DSA:3.30.590.10 119 453 1.1E-104 T 14-10-2018 Atu2142 4b510de6b814200c7f10e28b1f7ddb6b 454 Pfam PF00120 Glutamine synthetase, catalytic domain 117 448 4.2E-108 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu2142 4b510de6b814200c7f10e28b1f7ddb6b 454 SMART SM01230 116 371 2.3E-105 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SUPERFAMILY SSF48452 40 420 3.79E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 430 463 1.6E-6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 51 84 62.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 323 356 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 499 532 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 464 498 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 391 424 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SMART SM00028 357 390 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 Pfam PF13181 Tetratricopeptide repeat 392 419 0.15 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 Pfam PF14559 Tetratricopeptide repeat 65 107 2.2E-6 T 14-10-2018 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 SUPERFAMILY SSF81901 323 566 8.89E-31 T 14-10-2018 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 Pfam PF13432 Tetratricopeptide repeat 505 561 8.4E-6 T 14-10-2018 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 Gene3D G3DSA:1.25.40.10 263 578 8.0E-50 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 Gene3D G3DSA:1.25.40.10 38 262 1.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0633 56789e11f9348c2867759f4cbe4ccaea 614 Pfam PF00515 Tetratricopeptide repeat 432 462 1.0E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 Pfam PF12840 Helix-turn-helix domain 17 75 2.3E-12 T 14-10-2018 Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 SUPERFAMILY SSF46785 2 95 3.15E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 SMART SM00418 16 96 6.8E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 Gene3D G3DSA:1.10.10.10 9 94 2.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 1.0E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.0E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1254 7ba1fcacad35aedcf3708c3fde67fb42 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 1.0E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1944 b5650fc26ae9f6c4d533da84961aea21 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 96 21.312 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Atu1944 b5650fc26ae9f6c4d533da84961aea21 97 Pfam PF00276 Ribosomal protein L23 8 93 2.0E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Atu1944 b5650fc26ae9f6c4d533da84961aea21 97 Gene3D G3DSA:3.30.70.330 5 96 7.2E-33 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Atu1944 b5650fc26ae9f6c4d533da84961aea21 97 SUPERFAMILY SSF54189 6 94 3.56E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu4457 ec7c51947b6640392020666bcb366c25 260 PIRSF PIRSF001435 29 241 6.6E-52 T 14-10-2018 Atu4457 ec7c51947b6640392020666bcb366c25 260 SMART SM00478 68 215 5.8E-59 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atu4457 ec7c51947b6640392020666bcb366c25 260 SUPERFAMILY SSF48150 34 236 8.17E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atu4457 ec7c51947b6640392020666bcb366c25 260 Hamap MF_00942 Endonuclease III [nth]. 19 239 37.907 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Atu4457 ec7c51947b6640392020666bcb366c25 260 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 64 197 2.8E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Atu4457 ec7c51947b6640392020666bcb366c25 260 TIGRFAM TIGR01083 nth: endonuclease III 35 224 1.7E-81 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Atu4457 ec7c51947b6640392020666bcb366c25 260 Pfam PF00633 Helix-hairpin-helix motif 130 157 5.8E-10 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Atu4457 ec7c51947b6640392020666bcb366c25 260 ProSitePatterns PS01155 Endonuclease III family signature. 132 161 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Atu4457 ec7c51947b6640392020666bcb366c25 260 Gene3D G3DSA:1.10.1670.10 43 233 6.8E-75 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Atu4457 ec7c51947b6640392020666bcb366c25 260 Gene3D G3DSA:1.10.340.30 51 162 6.8E-75 T 14-10-2018 Atu4457 ec7c51947b6640392020666bcb366c25 260 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 217 233 1.0E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Atu0334 86657992c3b41b7c27cbe036ed417372 187 Pfam PF03968 OstA-like protein 52 164 5.3E-23 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Atu0334 86657992c3b41b7c27cbe036ed417372 187 Gene3D G3DSA:2.60.450.10 45 179 1.2E-21 T 14-10-2018 Atu3399 56e9e30e9c8e13f7e2765d5e75756a64 307 SUPERFAMILY SSF51735 94 273 3.03E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3399 56e9e30e9c8e13f7e2765d5e75756a64 307 Gene3D G3DSA:3.40.50.720 91 273 4.7E-105 T 14-10-2018 Atu3399 56e9e30e9c8e13f7e2765d5e75756a64 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 272 9.2E-46 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu3399 56e9e30e9c8e13f7e2765d5e75756a64 307 Gene3D G3DSA:3.40.50.720 16 307 4.7E-105 T 14-10-2018 Atu1280 a262c5038232f3bb584a2558c58f004c 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 20.281 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Atu1280 a262c5038232f3bb584a2558c58f004c 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 3.5E-25 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Atu2636 20db424eeb63f328e38275b37edfe3f1 998 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 93 996 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Pfam PF00676 Dehydrogenase E1 component 250 574 6.3E-58 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Gene3D G3DSA:3.40.50.11610 780 994 1.9E-174 T 14-10-2018 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 SMART SM00861 644 837 7.6E-61 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu2636 20db424eeb63f328e38275b37edfe3f1 998 SUPERFAMILY SSF52518 627 843 2.45E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 841 996 4.5E-54 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 13 52 7.5E-19 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 SUPERFAMILY SSF52518 159 587 1.3E-93 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Gene3D G3DSA:3.40.50.12470 603 860 1.9E-174 T 14-10-2018 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 PIRSF PIRSF000157 1 998 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Pfam PF02779 Transketolase, pyrimidine binding domain 643 838 1.1E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Gene3D G3DSA:1.10.287.1150 119 201 1.5E-22 T 14-10-2018 Atu2636 20db424eeb63f328e38275b37edfe3f1 998 Gene3D G3DSA:3.40.50.970 202 578 1.8E-151 T 14-10-2018 Atu5291 8d55561f8f14a0aca072f5700006c657 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 4.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5291 8d55561f8f14a0aca072f5700006c657 210 SUPERFAMILY SSF48498 78 192 3.08E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu5291 8d55561f8f14a0aca072f5700006c657 210 SUPERFAMILY SSF46689 5 61 3.9E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5291 8d55561f8f14a0aca072f5700006c657 210 Gene3D G3DSA:1.10.357.10 48 193 4.0E-26 T 14-10-2018 Atu5291 8d55561f8f14a0aca072f5700006c657 210 Gene3D G3DSA:1.10.10.60 2 46 3.3E-12 T 14-10-2018 Atu0001 b3f5aa39e696878fbe20fa7e49e9a6af 273 Pfam PF03618 Kinase/pyrophosphorylase 10 266 6.1E-89 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Atu0001 b3f5aa39e696878fbe20fa7e49e9a6af 273 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 8 271 53.286 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 Pfam PF02780 Transketolase, C-terminal domain 545 651 7.9E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 SUPERFAMILY SSF52922 533 659 4.97E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 Gene3D G3DSA:3.40.50.970 3 324 3.6E-116 T 14-10-2018 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 657 4.6E-254 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 SUPERFAMILY SSF52518 343 522 4.72E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 Gene3D G3DSA:3.40.50.920 537 660 1.5E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 331 2.6E-139 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 SUPERFAMILY SSF52518 4 317 1.49E-115 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 ProSitePatterns PS00802 Transketolase signature 2. 465 481 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 Gene3D G3DSA:3.40.50.970 325 532 1.7E-78 T 14-10-2018 Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 Pfam PF02779 Transketolase, pyrimidine binding domain 352 522 1.1E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu3736 6fb5c2077099360dcab78315fb7cc32a 660 SMART SM00861 352 524 1.9E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu4367 2d7ad77cd44f4b0231f817fdf67940a7 299 Gene3D G3DSA:3.40.190.290 91 293 5.6E-66 T 14-10-2018 Atu4367 2d7ad77cd44f4b0231f817fdf67940a7 299 SUPERFAMILY SSF53850 89 297 1.54E-45 T 14-10-2018 Atu4367 2d7ad77cd44f4b0231f817fdf67940a7 299 SUPERFAMILY SSF46785 4 85 3.71E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4367 2d7ad77cd44f4b0231f817fdf67940a7 299 Pfam PF03466 LysR substrate binding domain 88 293 1.1E-42 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4367 2d7ad77cd44f4b0231f817fdf67940a7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4367 2d7ad77cd44f4b0231f817fdf67940a7 299 Gene3D G3DSA:1.10.10.10 3 89 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1236 18637fc895f86c4cb0ffb2f0d7b6a796 517 Pfam PF13727 CoA-binding domain 108 287 7.3E-47 T 14-10-2018 Atu1236 18637fc895f86c4cb0ffb2f0d7b6a796 517 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 65 517 2.0E-136 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Atu1236 18637fc895f86c4cb0ffb2f0d7b6a796 517 SUPERFAMILY SSF51735 189 276 7.87E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1236 18637fc895f86c4cb0ffb2f0d7b6a796 517 Gene3D G3DSA:3.40.50.720 187 312 9.5E-17 T 14-10-2018 Atu1236 18637fc895f86c4cb0ffb2f0d7b6a796 517 Pfam PF02397 Bacterial sugar transferase 323 511 4.8E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase Atu1236 18637fc895f86c4cb0ffb2f0d7b6a796 517 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 71 517 5.3E-138 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 Atu0462 f22bb48f83096775f0875ad09e2440b4 213 SUPERFAMILY SSF55166 2 127 1.57E-27 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu0462 f22bb48f83096775f0875ad09e2440b4 213 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 55 126 8.7E-17 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 Atu0462 f22bb48f83096775f0875ad09e2440b4 213 Gene3D G3DSA:3.30.1380.10 5 126 2.9E-20 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu1540 1ca1202b184b5769ba9150d57e647cff 205 Gene3D G3DSA:3.90.1530.10 1 134 6.9E-49 T 14-10-2018 Atu1540 1ca1202b184b5769ba9150d57e647cff 205 PIRSF PIRSF029669 1 205 4.7E-90 T 14-10-2018 IPR016932 Uncharacterised conserved protein UCP029669 Atu1540 1ca1202b184b5769ba9150d57e647cff 205 Gene3D G3DSA:1.10.8.10 135 195 5.1E-26 T 14-10-2018 Atu1540 1ca1202b184b5769ba9150d57e647cff 205 SUPERFAMILY SSF110849 5 202 2.25E-70 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu1540 1ca1202b184b5769ba9150d57e647cff 205 Pfam PF08857 Putative ParB-like nuclease 12 167 5.8E-53 T 14-10-2018 IPR014956 Putative ParB-like nuclease Atu3637 c61b237f6fdbee30070a084721b1a3d3 76 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 11.354 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3637 c61b237f6fdbee30070a084721b1a3d3 76 Pfam PF01165 Ribosomal protein S21 2 55 1.7E-18 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3637 c61b237f6fdbee30070a084721b1a3d3 76 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 56 2.0E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3637 c61b237f6fdbee30070a084721b1a3d3 76 Gene3D G3DSA:1.20.5.1150 14 51 9.8E-9 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3637 c61b237f6fdbee30070a084721b1a3d3 76 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 2.2E-18 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu4024 35024a789df3be1567913782ccb7e9b8 654 SUPERFAMILY SSF81345 345 653 4.18E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4024 35024a789df3be1567913782ccb7e9b8 654 Pfam PF01032 FecCD transport family 15 322 3.2E-65 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu4024 35024a789df3be1567913782ccb7e9b8 654 Pfam PF01032 FecCD transport family 355 651 1.4E-71 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu4024 35024a789df3be1567913782ccb7e9b8 654 Gene3D G3DSA:1.10.3470.10 341 654 1.9E-69 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4024 35024a789df3be1567913782ccb7e9b8 654 Gene3D G3DSA:1.10.3470.10 3 326 1.0E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4024 35024a789df3be1567913782ccb7e9b8 654 SUPERFAMILY SSF81345 7 324 3.79E-57 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu0696 08159d68e7cda487f43f345a108b83c3 245 Gene3D G3DSA:3.40.50.1000 16 225 1.0E-28 T 14-10-2018 IPR023214 HAD superfamily Atu0696 08159d68e7cda487f43f345a108b83c3 245 Gene3D G3DSA:1.10.150.240 28 108 1.0E-28 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu0696 08159d68e7cda487f43f345a108b83c3 245 Pfam PF13419 Haloacid dehalogenase-like hydrolase 96 206 1.3E-18 T 14-10-2018 Atu0696 08159d68e7cda487f43f345a108b83c3 245 SUPERFAMILY SSF56784 11 241 5.29E-39 T 14-10-2018 IPR036412 HAD-like superfamily Atu0696 08159d68e7cda487f43f345a108b83c3 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 205 1.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 SUPERFAMILY SSF47240 14 167 4.57E-45 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 3.1E-8 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 74 90 3.1E-8 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 146 164 3.1E-8 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 Gene3D G3DSA:1.20.1260.10 4 168 9.8E-43 T 14-10-2018 IPR012347 Ferritin-like Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 Pfam PF00210 Ferritin-like domain 30 164 2.2E-26 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Atu4777 42ae164268dbb1fffd3cb149b4fa03d5 172 PIRSF PIRSF005900 7 172 2.3E-55 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 Gene3D G3DSA:3.40.50.300 312 611 1.1E-86 T 14-10-2018 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 Gene3D G3DSA:3.40.50.300 16 296 2.9E-85 T 14-10-2018 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 SUPERFAMILY SSF52540 316 564 2.06E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 544 579 1.9E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 279 2.6E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 SMART SM00382 350 542 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 SMART SM00382 47 246 8.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 Pfam PF00005 ABC transporter 342 492 2.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 Pfam PF00005 ABC transporter 39 196 2.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4445 454eaab28170ae5fe8d86dd435d8a970 616 SUPERFAMILY SSF52540 18 268 3.32E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 166 4.0E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 Gene3D G3DSA:3.30.1330.10 8 173 3.4E-68 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 9 350 45.397 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 340 2.7E-137 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 Gene3D G3DSA:3.90.650.10 175 354 1.8E-70 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 Pfam PF02769 AIR synthase related protein, C-terminal domain 180 345 9.8E-38 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 SUPERFAMILY SSF56042 176 346 5.53E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Atu1141 e88fb5022c20dc0c090e66a47b4dea7b 357 SUPERFAMILY SSF55326 9 172 7.33E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Atu1693 00a606538a763bac694c470dcdc51924 602 Gene3D G3DSA:3.40.50.720 404 564 9.2E-36 T 14-10-2018 Atu1693 00a606538a763bac694c470dcdc51924 602 Pfam PF02254 TrkA-N domain 406 519 2.2E-22 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Atu1693 00a606538a763bac694c470dcdc51924 602 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 17 289 9.7E-81 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Atu1693 00a606538a763bac694c470dcdc51924 602 SUPERFAMILY SSF51735 405 534 3.55E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1693 00a606538a763bac694c470dcdc51924 602 Pfam PF00999 Sodium/hydrogen exchanger family 14 378 2.2E-72 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Atu1693 00a606538a763bac694c470dcdc51924 602 Gene3D G3DSA:1.20.1530.20 6 384 2.3E-86 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 231 4.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 Pfam PF00005 ABC transporter 281 427 5.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 Gene3D G3DSA:1.10.3720.10 11 234 1.3E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 122 1.2E-18 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 SMART SM00382 290 475 5.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 SUPERFAMILY SSF161098 25 217 4.58E-37 T 14-10-2018 IPR035906 MetI-like superfamily Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 Gene3D G3DSA:3.40.50.300 265 502 3.2E-78 T 14-10-2018 Atu5005 3f7a4ed7b08739e218eb44ddb5a7ce4f 502 SUPERFAMILY SSF52540 266 497 1.39E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3015 f9ed4a0f47ef2bd48b1bca8450745ab7 183 Pfam PF13238 AAA domain 13 127 2.4E-8 T 14-10-2018 Atu3015 f9ed4a0f47ef2bd48b1bca8450745ab7 183 Gene3D G3DSA:3.40.50.300 1 183 3.6E-59 T 14-10-2018 Atu3015 f9ed4a0f47ef2bd48b1bca8450745ab7 183 SUPERFAMILY SSF52540 6 176 1.21E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2215 1496ba32e9631b0e1f4835490e878223 264 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 39 247 3.9E-49 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Atu2215 1496ba32e9631b0e1f4835490e878223 264 Gene3D G3DSA:3.60.140.10 9 263 6.1E-86 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Atu2215 1496ba32e9631b0e1f4835490e878223 264 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 28 259 3.8E-70 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Atu2215 1496ba32e9631b0e1f4835490e878223 264 SUPERFAMILY SSF64438 20 260 1.17E-84 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Atu0203 f0ff4a64c4606cb3574253359a531463 305 Pfam PF01435 Peptidase family M48 115 291 4.7E-21 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Atu5081 d1d3581549c009cb88d97d0071bf51e2 292 Gene3D G3DSA:1.10.3720.10 15 280 2.1E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu5081 d1d3581549c009cb88d97d0071bf51e2 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 284 1.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5081 d1d3581549c009cb88d97d0071bf51e2 292 SUPERFAMILY SSF161098 23 292 1.12E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu4609 c70e0f10795e22183765381a5a3e53d8 306 Pfam PF13641 Glycosyltransferase like family 2 35 217 6.9E-8 T 14-10-2018 Atu4609 c70e0f10795e22183765381a5a3e53d8 306 SUPERFAMILY SSF53448 26 252 2.77E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4609 c70e0f10795e22183765381a5a3e53d8 306 Gene3D G3DSA:3.90.550.10 18 227 1.1E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 PIRSF PIRSF006493 1 270 1.9E-100 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 Pfam PF02735 Ku70/Ku80 beta-barrel domain 14 177 1.6E-34 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 263 29.489 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 Gene3D G3DSA:2.40.290.10 5 180 2.9E-19 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 SMART SM00559 55 188 4.2E-18 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 265 2.2E-96 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Atu5050 e2301c47cd9f1102c88cde555ef249d1 270 SUPERFAMILY SSF100939 4 267 1.69E-47 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 Gene3D G3DSA:1.10.1040.10 162 292 8.9E-46 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 289 1.8E-40 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 SUPERFAMILY SSF48179 162 290 2.15E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 Gene3D G3DSA:3.40.50.720 1 160 1.5E-51 T 14-10-2018 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 SUPERFAMILY SSF51735 3 160 1.04E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 PIRSF PIRSF000103 1 294 1.0E-82 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 159 1.7E-48 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu4129 af448c14b39a77f6bd63f8a36f2b808b 294 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 290 3.2E-123 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00385 P450 superfamily signature 366 377 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00385 P450 superfamily signature 357 366 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00385 P450 superfamily signature 255 272 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00385 P450 superfamily signature 290 301 5.9E-6 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 SUPERFAMILY SSF48264 34 414 9.56E-73 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 335 350 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 290 301 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 366 377 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 166 181 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 307 334 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 149 165 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 357 366 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 PRINTS PR00359 B-class P450 signature 209 231 1.2E-30 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 Gene3D G3DSA:1.10.630.10 4 418 2.0E-84 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 Pfam PF00067 Cytochrome P450 207 386 2.3E-21 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu6150 786cc7384510a502e6530ceda8cc848c 419 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 359 368 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 362 35.204 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 329 345 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 Pfam PF01264 Chorismate synthase 10 355 2.6E-128 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 Gene3D G3DSA:3.60.150.10 1 365 1.9E-138 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 360 8.8E-124 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 PIRSF PIRSF001456 3 365 8.2E-128 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 SUPERFAMILY SSF103263 3 360 1.57E-136 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu0754 edeb70a32360cb3acd1696d3be5d0982 365 ProSitePatterns PS00788 Chorismate synthase signature 2. 130 146 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Atu3689 091f6eb2427b922d757539fdfbec45a9 349 Gene3D G3DSA:1.10.3470.10 20 346 9.2E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu3689 091f6eb2427b922d757539fdfbec45a9 349 Pfam PF01032 FecCD transport family 34 341 1.9E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu3689 091f6eb2427b922d757539fdfbec45a9 349 PRINTS PR00173 Glutamate-aspartate symporter signature 266 285 2.9E-5 T 14-10-2018 Atu3689 091f6eb2427b922d757539fdfbec45a9 349 PRINTS PR00173 Glutamate-aspartate symporter signature 24 44 2.9E-5 T 14-10-2018 Atu3689 091f6eb2427b922d757539fdfbec45a9 349 PRINTS PR00173 Glutamate-aspartate symporter signature 69 89 2.9E-5 T 14-10-2018 Atu3689 091f6eb2427b922d757539fdfbec45a9 349 SUPERFAMILY SSF81345 21 341 3.53E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 Gene3D G3DSA:3.30.1300.10 178 278 8.0E-33 T 14-10-2018 Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 67 5.4E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.7E-98 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 SUPERFAMILY SSF52374 1 280 3.06E-103 T 14-10-2018 Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 Gene3D G3DSA:3.40.50.620 2 177 9.4E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.843 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Atu3482 ed28929b3e712f4c0b7522a0792b6b2c 292 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.7E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Atu1629 6548593d7e2385e64c10628bad4f83b9 104 Pfam PF12840 Helix-turn-helix domain 5 63 7.6E-17 T 14-10-2018 Atu1629 6548593d7e2385e64c10628bad4f83b9 104 SMART SM00418 5 86 1.5E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1629 6548593d7e2385e64c10628bad4f83b9 104 SUPERFAMILY SSF46785 5 96 1.64E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1629 6548593d7e2385e64c10628bad4f83b9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 3.5E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1629 6548593d7e2385e64c10628bad4f83b9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.5E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1629 6548593d7e2385e64c10628bad4f83b9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 3.5E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1629 6548593d7e2385e64c10628bad4f83b9 104 Gene3D G3DSA:1.10.10.10 2 104 1.6E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4440 61ad8cbf4f072f444f3188ea998960e9 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 269 9.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4440 61ad8cbf4f072f444f3188ea998960e9 272 Gene3D G3DSA:1.10.3720.10 59 266 3.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu4440 61ad8cbf4f072f444f3188ea998960e9 272 SUPERFAMILY SSF161098 65 252 2.22E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu5359 277fa905888853c434ef3a33dfc860ba 67 Gene3D G3DSA:3.30.160.160 6 53 2.7E-25 T 14-10-2018 Atu5359 277fa905888853c434ef3a33dfc860ba 67 SUPERFAMILY SSF160113 6 65 2.09E-19 T 14-10-2018 IPR036913 YegP-like superfamily Atu5359 277fa905888853c434ef3a33dfc860ba 67 Pfam PF07411 Domain of unknown function (DUF1508) 14 61 2.1E-22 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 1.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 PRINTS PR01703 Manganese superoxide dismutase signature 122 130 1.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.2E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 194 6.6E-33 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 Gene3D G3DSA:2.40.500.20 89 200 1.0E-38 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 Gene3D G3DSA:1.10.287.990 20 84 4.2E-20 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 SUPERFAMILY SSF54719 88 199 3.93E-40 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 SUPERFAMILY SSF46609 1 85 2.23E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.8E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu0876 ef3e78ce1f625847be28c2440b7bf149 200 PIRSF PIRSF000349 1 200 8.0E-75 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu2768 bd480de8e898f25c5bc8faced9192a1c 191 Pfam PF05233 PHB accumulation regulatory domain 74 113 3.2E-17 T 14-10-2018 IPR007897 PHB accumulation regulatory Atu2768 bd480de8e898f25c5bc8faced9192a1c 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 9 68 7.1E-30 T 14-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal Atu2768 bd480de8e898f25c5bc8faced9192a1c 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 9 114 4.5E-43 T 14-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 Atu0756 0b9afd201ada76054c87fbfe3d45264a 196 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Atu0756 0b9afd201ada76054c87fbfe3d45264a 196 SUPERFAMILY SSF53254 3 191 2.75E-47 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu0756 0b9afd201ada76054c87fbfe3d45264a 196 Gene3D G3DSA:3.40.50.1240 2 195 3.5E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu0756 0b9afd201ada76054c87fbfe3d45264a 196 SMART SM00855 2 161 5.6E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu0756 0b9afd201ada76054c87fbfe3d45264a 196 PIRSF PIRSF000709 2 196 9.8E-13 T 14-10-2018 Atu0756 0b9afd201ada76054c87fbfe3d45264a 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 193 2.0E-40 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu5250 72333e7af56ebd12262b798db5371355 257 SUPERFAMILY SSF51735 6 245 9.38E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 1.1E-59 T 14-10-2018 Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5250 72333e7af56ebd12262b798db5371355 257 Gene3D G3DSA:3.40.50.720 2 255 5.8E-82 T 14-10-2018 Atu2010 1f588cad75630f2f38d35e968001daad 579 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 409 569 3.5E-46 T 14-10-2018 IPR000160 GGDEF domain Atu2010 1f588cad75630f2f38d35e968001daad 579 SUPERFAMILY SSF55073 416 569 2.35E-42 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2010 1f588cad75630f2f38d35e968001daad 579 Gene3D G3DSA:3.30.70.270 400 571 4.5E-51 T 14-10-2018 Atu2010 1f588cad75630f2f38d35e968001daad 579 Gene3D G3DSA:1.20.1480.50 302 399 5.6E-5 T 14-10-2018 Atu2010 1f588cad75630f2f38d35e968001daad 579 SMART SM00267 400 571 2.6E-55 T 14-10-2018 IPR000160 GGDEF domain Atu2010 1f588cad75630f2f38d35e968001daad 579 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 567 7.1E-43 T 14-10-2018 IPR000160 GGDEF domain Atu1468 3a63a812968db67bfcbaf75b62e133d0 324 SUPERFAMILY SSF110087 192 310 6.15E-45 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily Atu1468 3a63a812968db67bfcbaf75b62e133d0 324 PIRSF PIRSF037139 1 324 1.0E-182 T 14-10-2018 IPR021174 Uncharacterised conserved protein UCP037139 Atu1468 3a63a812968db67bfcbaf75b62e133d0 324 Gene3D G3DSA:2.60.40.2230 22 184 5.0E-28 T 14-10-2018 IPR038507 YcnI-like superfamily Atu1468 3a63a812968db67bfcbaf75b62e133d0 324 Gene3D G3DSA:2.60.40.1890 202 316 3.1E-38 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily Atu1468 3a63a812968db67bfcbaf75b62e133d0 324 Pfam PF04314 Copper chaperone PCu(A)C 199 308 1.0E-40 T 14-10-2018 IPR007410 Copper chaperone PCuAC Atu1468 3a63a812968db67bfcbaf75b62e133d0 324 Pfam PF07987 Domain of unkown function (DUF1775) 24 171 1.2E-41 T 14-10-2018 IPR012533 YcnI-like Atu2138 60cf162b5e0a050ff98bb3b6ba80a9d3 381 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 179 207 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atu2138 60cf162b5e0a050ff98bb3b6ba80a9d3 381 Gene3D G3DSA:3.40.50.1970 4 190 2.9E-53 T 14-10-2018 Atu2138 60cf162b5e0a050ff98bb3b6ba80a9d3 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 371 8.1E-115 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Atu2138 60cf162b5e0a050ff98bb3b6ba80a9d3 381 Gene3D G3DSA:1.20.1090.10 192 381 1.8E-59 T 14-10-2018 Atu2138 60cf162b5e0a050ff98bb3b6ba80a9d3 381 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 265 285 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atu2138 60cf162b5e0a050ff98bb3b6ba80a9d3 381 SUPERFAMILY SSF56796 6 380 8.9E-126 T 14-10-2018 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 239 258 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 50 69 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 70 89 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 219 238 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 207 218 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 258 273 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 148 172 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 PRINTS PR00603 Cytochrome C1 signature 115 135 2.5E-56 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 SUPERFAMILY SSF46626 42 257 1.87E-66 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 Gene3D G3DSA:1.20.5.100 259 294 2.4E-6 T 14-10-2018 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 Gene3D G3DSA:1.10.760.10 44 258 1.2E-82 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu2237 18a7e1d0a99f076004110a78fb45b8e5 294 Pfam PF02167 Cytochrome C1 family 52 291 5.0E-97 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Atu3265 2610ac9484b5d5d68a8633baa880129b 160 Gene3D G3DSA:3.30.1330.40 7 157 4.2E-61 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu3265 2610ac9484b5d5d68a8633baa880129b 160 SUPERFAMILY SSF55298 9 157 5.97E-54 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu3265 2610ac9484b5d5d68a8633baa880129b 160 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 13 150 9.3E-30 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Atu4508 49c770f2cd747fcabc5c93087e65be87 375 SUPERFAMILY SSF55347 135 319 2.94E-29 T 14-10-2018 Atu4508 49c770f2cd747fcabc5c93087e65be87 375 Gene3D G3DSA:3.30.360.10 129 369 1.5E-63 T 14-10-2018 Atu4508 49c770f2cd747fcabc5c93087e65be87 375 SUPERFAMILY SSF51735 4 160 4.13E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4508 49c770f2cd747fcabc5c93087e65be87 375 Gene3D G3DSA:3.40.50.720 3 127 7.0E-38 T 14-10-2018 Atu4508 49c770f2cd747fcabc5c93087e65be87 375 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 130 6.1E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu0965 de23485f495044ecbfda954ec806fd7e 294 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 163 2.3E-58 T 14-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal Atu0965 de23485f495044ecbfda954ec806fd7e 294 Pfam PF09356 Phage conserved hypothetical protein BR0599 193 275 9.4E-25 T 14-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal Atu0965 de23485f495044ecbfda954ec806fd7e 294 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 23 292 1.2E-115 T 14-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 Atu1238 d1683e635a2d8bf81b9b49ea26f5d3ef 190 Gene3D G3DSA:3.10.560.10 27 164 4.6E-24 T 14-10-2018 Atu1238 d1683e635a2d8bf81b9b49ea26f5d3ef 190 Pfam PF10531 SLBB domain 117 164 3.4E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1238 d1683e635a2d8bf81b9b49ea26f5d3ef 190 Gene3D G3DSA:3.30.1950.10 44 115 4.6E-24 T 14-10-2018 Atu1238 d1683e635a2d8bf81b9b49ea26f5d3ef 190 Pfam PF02563 Polysaccharide biosynthesis/export protein 37 111 9.5E-21 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Atu1875 7f907b076769ba51f7a5c02851b25422 297 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 231 244 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atu1875 7f907b076769ba51f7a5c02851b25422 297 Pfam PF00294 pfkB family carbohydrate kinase 8 275 5.0E-42 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu1875 7f907b076769ba51f7a5c02851b25422 297 SUPERFAMILY SSF53613 11 286 4.83E-48 T 14-10-2018 IPR029056 Ribokinase-like Atu1875 7f907b076769ba51f7a5c02851b25422 297 Gene3D G3DSA:3.40.1190.20 1 297 9.9E-117 T 14-10-2018 IPR029056 Ribokinase-like Atu8129 dabeb715d88d3c7213d95afe496bc7f2 165 Pfam PF00188 Cysteine-rich secretory protein family 49 162 4.3E-11 T 14-10-2018 IPR014044 CAP domain Atu8129 dabeb715d88d3c7213d95afe496bc7f2 165 Gene3D G3DSA:3.40.33.10 26 162 9.0E-22 T 14-10-2018 IPR035940 CAP superfamily Atu8129 dabeb715d88d3c7213d95afe496bc7f2 165 SUPERFAMILY SSF55797 41 160 4.71E-11 T 14-10-2018 IPR035940 CAP superfamily Atu2530 52c5b3f33355de90684de2139839a160 409 Gene3D G3DSA:1.10.540.10 8 121 2.4E-25 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu2530 52c5b3f33355de90684de2139839a160 409 PIRSF PIRSF016578 2 409 1.5E-137 T 14-10-2018 Atu2530 52c5b3f33355de90684de2139839a160 409 SUPERFAMILY SSF47203 240 382 6.77E-14 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu2530 52c5b3f33355de90684de2139839a160 409 Gene3D G3DSA:2.40.110.10 123 216 6.8E-31 T 14-10-2018 Atu2530 52c5b3f33355de90684de2139839a160 409 SUPERFAMILY SSF56645 18 216 2.09E-35 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu2530 52c5b3f33355de90684de2139839a160 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 112 5.0E-5 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu2530 52c5b3f33355de90684de2139839a160 409 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 249 389 3.5E-39 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Atu2530 52c5b3f33355de90684de2139839a160 409 Gene3D G3DSA:1.20.140.10 222 407 1.5E-35 T 14-10-2018 Atu6028 05a7589f8aa5d457fee237c6d8e98343 257 SUPERFAMILY SSF52540 9 252 1.62E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6028 05a7589f8aa5d457fee237c6d8e98343 257 SMART SM00382 32 230 6.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6028 05a7589f8aa5d457fee237c6d8e98343 257 Pfam PF00005 ABC transporter 23 182 4.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6028 05a7589f8aa5d457fee237c6d8e98343 257 Gene3D G3DSA:3.40.50.300 4 256 6.3E-74 T 14-10-2018 Atu6028 05a7589f8aa5d457fee237c6d8e98343 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu6028 05a7589f8aa5d457fee237c6d8e98343 257 PIRSF PIRSF039085 4 257 1.9E-122 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu1048 ad40c2bbb7484a6d19613f9291025ab6 272 SUPERFAMILY SSF161098 67 254 2.49E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu1048 ad40c2bbb7484a6d19613f9291025ab6 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 262 3.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1048 ad40c2bbb7484a6d19613f9291025ab6 272 Gene3D G3DSA:1.10.3720.10 63 262 1.3E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu2798 77e27cd99e9242195f672e783cf535be 419 SUPERFAMILY SSF53790 20 221 1.57E-40 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu2798 77e27cd99e9242195f672e783cf535be 419 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 21 201 1.0E-17 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu2798 77e27cd99e9242195f672e783cf535be 419 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 248 369 9.1E-35 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Atu2798 77e27cd99e9242195f672e783cf535be 419 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 23 217 1.3E-44 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Atu2798 77e27cd99e9242195f672e783cf535be 419 PIRSF PIRSF036428 16 418 1.1E-137 T 14-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 Atu2798 77e27cd99e9242195f672e783cf535be 419 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 249 366 9.8E-6 T 14-10-2018 Atu2798 77e27cd99e9242195f672e783cf535be 419 Gene3D G3DSA:3.40.50.150 243 418 2.2E-68 T 14-10-2018 Atu2798 77e27cd99e9242195f672e783cf535be 419 SUPERFAMILY SSF53335 223 413 1.95E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2798 77e27cd99e9242195f672e783cf535be 419 Gene3D G3DSA:3.40.1010.10 20 121 1.1E-15 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 SUPERFAMILY SSF51395 500 1272 1.63E-268 T 14-10-2018 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Gene3D G3DSA:3.20.20.70 487 840 5.0E-142 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Pfam PF01645 Conserved region in glutamate synthase 856 1228 1.0E-154 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Gene3D G3DSA:3.20.20.70 841 1280 4.9E-199 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Pfam PF00310 Glutamine amidotransferases class-II 53 478 3.1E-184 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Gene3D G3DSA:2.160.20.60 1281 1581 1.0E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Gene3D G3DSA:3.60.20.10 53 486 8.7E-181 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 SUPERFAMILY SSF69336 1277 1571 9.42E-94 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Pfam PF01493 GXGXG motif 1308 1494 5.3E-83 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 SUPERFAMILY SSF56235 53 481 5.17E-155 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu3784 1358170270dd1f53f506eeeda6dee01d 1581 Pfam PF04898 Glutamate synthase central domain 506 793 2.7E-118 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Atu5251 ef8500457f12995d85b89e0e43169ef1 445 PIRSF PIRSF000521 22 180 2.2E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5251 ef8500457f12995d85b89e0e43169ef1 445 PIRSF PIRSF000521 154 442 2.1E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5251 ef8500457f12995d85b89e0e43169ef1 445 SUPERFAMILY SSF53383 44 437 4.23E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu5251 ef8500457f12995d85b89e0e43169ef1 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 291 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5251 ef8500457f12995d85b89e0e43169ef1 445 Gene3D G3DSA:3.90.1150.10 48 434 5.2E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu5251 ef8500457f12995d85b89e0e43169ef1 445 Gene3D G3DSA:3.40.640.10 81 338 5.2E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu5251 ef8500457f12995d85b89e0e43169ef1 445 Pfam PF00202 Aminotransferase class-III 49 436 1.5E-78 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 SMART SM00422 38 105 8.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 SMART SM00421 166 223 0.0011 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 SUPERFAMILY SSF46894 158 229 6.8E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 Gene3D G3DSA:1.10.10.10 162 230 1.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 Pfam PF13411 MerR HTH family regulatory protein 40 104 4.5E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 Gene3D G3DSA:1.10.1660.10 34 156 1.3E-19 T 14-10-2018 Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 SUPERFAMILY SSF46955 40 148 1.03E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu2025 ee7fb1561f2a478e024937c78a332ebd 231 Pfam PF00196 Bacterial regulatory proteins, luxR family 169 222 2.9E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 567 2.6E-50 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 SMART SM00304 299 351 14.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 SMART SM00304 218 271 1.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 SUPERFAMILY SSF58104 319 600 3.14E-68 T 14-10-2018 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 Gene3D G3DSA:1.20.1480.50 185 275 1.1E-12 T 14-10-2018 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 SUPERFAMILY SSF103190 90 185 1.41E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 Pfam PF00672 HAMP domain 219 266 3.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 Pfam PF17201 Cache 3/Cache 2 fusion domain 78 197 2.7E-31 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 SUPERFAMILY SSF158472 220 267 5.49E-7 T 14-10-2018 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 Gene3D G3DSA:1.10.287.950 298 601 1.4E-75 T 14-10-2018 Atu0526 27e4140a905f632c0ae1a5e9eb4e5c48 615 SMART SM00283 352 599 1.3E-94 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu1171 4428e7ae40d9bb984b81eb779989fc7b 148 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 146 24.369 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1171 4428e7ae40d9bb984b81eb779989fc7b 148 SUPERFAMILY SSF52121 2 146 9.68E-49 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1171 4428e7ae40d9bb984b81eb779989fc7b 148 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 8 141 5.2E-31 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1171 4428e7ae40d9bb984b81eb779989fc7b 148 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 5 143 2.6E-44 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu1171 4428e7ae40d9bb984b81eb779989fc7b 148 Gene3D G3DSA:3.40.50.960 1 148 1.5E-50 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Atu0094 10e379f88b2d82fdb8c818f6f9bdbab1 204 Pfam PF03473 MOSC domain 47 157 7.5E-18 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Atu0094 10e379f88b2d82fdb8c818f6f9bdbab1 204 SUPERFAMILY SSF50800 1 202 1.62E-55 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Atu0094 10e379f88b2d82fdb8c818f6f9bdbab1 204 Gene3D G3DSA:2.40.33.20 1 204 1.4E-54 T 14-10-2018 Atu4757 5b8e858734e4339688e5356dc4c996b4 392 TIGRFAM TIGR02993 ectoine_eutD: ectoine utilization protein EutD 3 392 2.1E-255 T 14-10-2018 IPR014335 Ectoine utilization protein EutD KEGG: 00260+3.5.4.44|MetaCyc: PWY-7855 Atu4757 5b8e858734e4339688e5356dc4c996b4 392 Pfam PF00557 Metallopeptidase family M24 167 375 1.6E-31 T 14-10-2018 IPR000994 Peptidase M24 Atu4757 5b8e858734e4339688e5356dc4c996b4 392 SUPERFAMILY SSF55920 159 390 3.4E-59 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu4757 5b8e858734e4339688e5356dc4c996b4 392 Gene3D G3DSA:3.90.230.10 158 390 5.6E-43 T 14-10-2018 Atu4757 5b8e858734e4339688e5356dc4c996b4 392 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 159 4.0E-23 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Atu4757 5b8e858734e4339688e5356dc4c996b4 392 SUPERFAMILY SSF53092 4 157 1.45E-43 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu4757 5b8e858734e4339688e5356dc4c996b4 392 Gene3D G3DSA:3.40.350.10 1 157 9.7E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu1735 cd9b6da4e441f0d65e811f45e3729c64 95 SUPERFAMILY SSF47413 31 76 4.79E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu1735 cd9b6da4e441f0d65e811f45e3729c64 95 SMART SM00530 32 86 5.8E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu1735 cd9b6da4e441f0d65e811f45e3729c64 95 Pfam PF01381 Helix-turn-helix 33 70 3.7E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu1735 cd9b6da4e441f0d65e811f45e3729c64 95 Gene3D G3DSA:1.10.260.40 31 95 2.3E-24 T 14-10-2018 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 ProSitePatterns PS00786 5'-nucleotidase signature 2. 117 128 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 SUPERFAMILY SSF54106 587 634 2.62E-5 T 14-10-2018 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 Gene3D G3DSA:3.90.780.10 341 537 2.7E-69 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 SMART SM00257 587 634 1.2E-8 T 14-10-2018 IPR018392 LysM domain Atu3770 53ce489a3acb92f68376c3762804cdc8 636 SUPERFAMILY SSF56300 26 332 5.51E-87 T 14-10-2018 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 Gene3D G3DSA:3.10.350.10 586 632 9.9E-12 T 14-10-2018 IPR036779 LysM domain superfamily Atu3770 53ce489a3acb92f68376c3762804cdc8 636 Pfam PF01476 LysM domain 588 634 8.9E-10 T 14-10-2018 IPR018392 LysM domain Atu3770 53ce489a3acb92f68376c3762804cdc8 636 Pfam PF02872 5'-nucleotidase, C-terminal domain 338 498 8.1E-46 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 PRINTS PR01607 Apyrase family signature 26 44 1.6E-40 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 PRINTS PR01607 Apyrase family signature 472 491 1.6E-40 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 PRINTS PR01607 Apyrase family signature 233 256 1.6E-40 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 PRINTS PR01607 Apyrase family signature 275 295 1.6E-40 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 PRINTS PR01607 Apyrase family signature 395 418 1.6E-40 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 PRINTS PR01607 Apyrase family signature 214 231 1.6E-40 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 Gene3D G3DSA:3.60.21.10 19 340 9.9E-103 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu3770 53ce489a3acb92f68376c3762804cdc8 636 ProSitePatterns PS00785 5'-nucleotidase signature 1. 28 40 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 SUPERFAMILY SSF55816 336 534 2.75E-63 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3770 53ce489a3acb92f68376c3762804cdc8 636 Pfam PF00149 Calcineurin-like phosphoesterase 28 250 1.8E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 1.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.5E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 SUPERFAMILY SSF53474 5 264 2.57E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 Gene3D G3DSA:3.40.50.1820 4 269 1.9E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5226 7a6966a044b9ed7c941b18ec25ea80d1 270 Pfam PF00561 alpha/beta hydrolase fold 25 249 7.7E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 SMART SM00533 286 602 4.9E-77 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 SUPERFAMILY SSF53150 113 283 3.66E-34 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Pfam PF01624 MutS domain I 1 115 1.8E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Gene3D G3DSA:3.30.420.110 123 259 1.2E-21 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Pfam PF00488 MutS domain V 630 817 2.0E-86 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 878 1.3E-254 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 SUPERFAMILY SSF55271 1 111 8.11E-38 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 PIRSF PIRSF037677 1 861 1.6E-154 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Pfam PF05192 MutS domain III 272 570 1.2E-35 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Gene3D G3DSA:3.40.50.300 580 882 7.0E-98 T 14-10-2018 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 SMART SM00534 627 814 1.4E-116 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Pfam PF05188 MutS domain II 124 251 6.8E-26 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 SUPERFAMILY SSF52540 578 818 6.56E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Gene3D G3DSA:1.10.1420.10 269 570 5.4E-83 T 14-10-2018 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Gene3D G3DSA:3.40.1170.10 1 117 1.1E-45 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 708 724 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Gene3D G3DSA:1.10.1420.10 392 514 5.4E-83 T 14-10-2018 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 SUPERFAMILY SSF48334 270 575 2.75E-76 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 872 23.47 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Atu0345 b4aa9e11e374288eadd3546c094ccf7a 883 Pfam PF05190 MutS family domain IV 433 529 1.6E-21 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Atu4624 8517930437e8c3db9be8892891be2c88 237 SUPERFAMILY SSF46785 8 79 1.02E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4624 8517930437e8c3db9be8892891be2c88 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 7.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4624 8517930437e8c3db9be8892891be2c88 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 7.6E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4624 8517930437e8c3db9be8892891be2c88 237 SUPERFAMILY SSF48008 96 230 1.1E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4624 8517930437e8c3db9be8892891be2c88 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 3.8E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4624 8517930437e8c3db9be8892891be2c88 237 SMART SM00895 99 225 5.1E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu4624 8517930437e8c3db9be8892891be2c88 237 SMART SM00345 16 75 3.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4624 8517930437e8c3db9be8892891be2c88 237 Pfam PF07729 FCD domain 99 224 6.4E-23 T 14-10-2018 IPR011711 GntR, C-terminal Atu4624 8517930437e8c3db9be8892891be2c88 237 Gene3D G3DSA:1.10.10.10 6 80 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4624 8517930437e8c3db9be8892891be2c88 237 Gene3D G3DSA:1.20.120.530 93 233 6.4E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2602 9286fba32e9a8ea975d0efc5de50ba5e 285 Gene3D G3DSA:1.10.3720.10 9 276 1.0E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu2602 9286fba32e9a8ea975d0efc5de50ba5e 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 276 2.4E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2602 9286fba32e9a8ea975d0efc5de50ba5e 285 SUPERFAMILY SSF161098 13 285 3.83E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu3095 90e3637124081511685b2f0ba9a5f291 157 PIRSF PIRSF021700 1 157 3.0E-65 T 14-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase Atu3095 90e3637124081511685b2f0ba9a5f291 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 118 1.0E-48 T 14-10-2018 IPR028973 PhnB-like Atu3095 90e3637124081511685b2f0ba9a5f291 157 Gene3D G3DSA:3.10.180.70 1 157 9.5E-62 T 14-10-2018 Atu3095 90e3637124081511685b2f0ba9a5f291 157 SUPERFAMILY SSF54593 3 155 5.63E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1172 349613d0a72ccd4a1cf69513ddc62e95 165 SUPERFAMILY SSF48013 20 162 6.02E-36 T 14-10-2018 IPR035926 NusB-like superfamily Atu1172 349613d0a72ccd4a1cf69513ddc62e95 165 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 158 3.4E-40 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Atu1172 349613d0a72ccd4a1cf69513ddc62e95 165 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 19 160 22.148 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Atu1172 349613d0a72ccd4a1cf69513ddc62e95 165 Gene3D G3DSA:1.10.940.10 18 164 3.2E-38 T 14-10-2018 IPR035926 NusB-like superfamily Atu1172 349613d0a72ccd4a1cf69513ddc62e95 165 Pfam PF01029 NusB family 24 157 2.3E-31 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 292 2.0E-153 T 14-10-2018 Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 PIRSF PIRSF000450 1 308 8.2E-150 T 14-10-2018 IPR033752 MetA family Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 299 3.1E-117 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 298 41.152 T 14-10-2018 IPR033752 MetA family Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 SUPERFAMILY SSF52317 18 296 9.16E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 Gene3D G3DSA:3.40.50.880 1 300 5.3E-120 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2718 5c3e7fe4e94e0c812c684500aa3e3c9a 308 Pfam PF04204 Homoserine O-succinyltransferase 2 298 2.5E-129 T 14-10-2018 IPR033752 MetA family Atu3910 7a8618c83c65a6ffb18a0f1c7a20f768 255 Pfam PF03746 LamB/YcsF family 4 241 8.8E-102 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Atu3910 7a8618c83c65a6ffb18a0f1c7a20f768 255 SUPERFAMILY SSF88713 3 251 6.74E-99 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu3910 7a8618c83c65a6ffb18a0f1c7a20f768 255 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.877 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Atu3910 7a8618c83c65a6ffb18a0f1c7a20f768 255 Gene3D G3DSA:3.20.20.370 2 253 3.4E-103 T 14-10-2018 Atu1634 323d56a3cbe893f7f51c500a9002caf1 84 Pfam PF04226 Transglycosylase associated protein 36 83 2.4E-11 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 SUPERFAMILY SSF56601 288 677 1.11E-106 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 Pfam PF00912 Transglycosylase 143 306 3.6E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 145 668 6.4E-173 T 14-10-2018 Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 Pfam PF00905 Penicillin binding protein transpeptidase domain 396 638 1.0E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 Gene3D G3DSA:3.40.710.10 327 701 5.6E-96 T 14-10-2018 Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 Gene3D G3DSA:1.10.3810.10 125 321 1.6E-68 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu0931 5f839d4cadf191e7331ab0d36d9bc0bc 757 SUPERFAMILY SSF53955 122 327 8.15E-70 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu4438 d037ccd88a904ec3849230d2fc68948f 511 SUPERFAMILY SSF53850 37 508 3.12E-118 T 14-10-2018 Atu4438 d037ccd88a904ec3849230d2fc68948f 511 Gene3D G3DSA:3.40.190.10 42 281 4.2E-67 T 14-10-2018 Atu4438 d037ccd88a904ec3849230d2fc68948f 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 417 9.8E-80 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4438 d037ccd88a904ec3849230d2fc68948f 511 Gene3D G3DSA:3.10.105.10 282 481 5.0E-46 T 14-10-2018 Atu4438 d037ccd88a904ec3849230d2fc68948f 511 PIRSF PIRSF002741 11 511 8.2E-96 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3972 58d135630bf06db4e08ee98a4918d973 265 Gene3D G3DSA:3.40.50.720 2 227 4.5E-51 T 14-10-2018 Atu3972 58d135630bf06db4e08ee98a4918d973 265 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 162 5.5E-17 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu3972 58d135630bf06db4e08ee98a4918d973 265 SUPERFAMILY SSF51735 2 205 4.8E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2095 7bbb8d515bbf48d2dba002a47ab05b3d 384 Pfam PF01098 Cell cycle protein 22 364 2.8E-80 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2095 7bbb8d515bbf48d2dba002a47ab05b3d 384 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 18 363 1.5E-106 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu1747 74e64986c871cd056e72dad14eb9f93a 119 SMART SM01234 31 98 9.0E-32 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atu1747 74e64986c871cd056e72dad14eb9f93a 119 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 46 98 8.0E-25 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atu1747 74e64986c871cd056e72dad14eb9f93a 119 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 38 104 2.4E-21 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atu1747 74e64986c871cd056e72dad14eb9f93a 119 Pfam PF01809 Haemolytic domain 36 98 7.9E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atu1747 74e64986c871cd056e72dad14eb9f93a 119 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 31 99 20.286 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Atu1300 0f8276a981df95eac61c8b9dfd0ca1ef 391 Gene3D G3DSA:1.20.1250.20 203 390 2.8E-17 T 14-10-2018 Atu1300 0f8276a981df95eac61c8b9dfd0ca1ef 391 Gene3D G3DSA:1.20.1250.20 4 197 7.5E-20 T 14-10-2018 Atu1300 0f8276a981df95eac61c8b9dfd0ca1ef 391 Pfam PF07690 Major Facilitator Superfamily 28 240 1.6E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1300 0f8276a981df95eac61c8b9dfd0ca1ef 391 SUPERFAMILY SSF103473 13 385 2.62E-46 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0891 a78ac77ec17a18363857c757bdcef1c2 335 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 333 7.4E-68 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atu0891 a78ac77ec17a18363857c757bdcef1c2 335 SUPERFAMILY SSF161111 22 260 7.45E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu0891 a78ac77ec17a18363857c757bdcef1c2 335 Gene3D G3DSA:1.20.1510.10 25 174 1.4E-19 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu0891 a78ac77ec17a18363857c757bdcef1c2 335 Gene3D G3DSA:1.20.1510.10 184 259 9.4E-11 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu0891 a78ac77ec17a18363857c757bdcef1c2 335 Pfam PF01545 Cation efflux family 30 258 5.4E-35 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 Pfam PF13545 Crp-like helix-turn-helix domain 160 229 4.8E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 Pfam PF00027 Cyclic nucleotide-binding domain 43 127 6.8E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 SMART SM00419 175 222 1.4E-4 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 SUPERFAMILY SSF51206 17 150 8.64E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 Gene3D G3DSA:2.60.120.10 6 151 2.6E-27 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 SUPERFAMILY SSF46785 157 228 2.81E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 Gene3D G3DSA:1.10.10.10 152 229 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2394 e4d2364d2491ad01dc887717ea43d59f 229 SMART SM00100 22 140 7.7E-6 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Atu5320 172ff6b20e8e3e2360fc9a8c4f060b2e 179 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 80 8.4E-6 T 14-10-2018 Atu5320 172ff6b20e8e3e2360fc9a8c4f060b2e 179 Gene3D G3DSA:3.40.50.1000 3 107 4.6E-23 T 14-10-2018 IPR023214 HAD superfamily Atu5320 172ff6b20e8e3e2360fc9a8c4f060b2e 179 SUPERFAMILY SSF56784 4 110 2.08E-17 T 14-10-2018 IPR036412 HAD-like superfamily Atu3351 3a65cf6aca6f7983e0a89ef7b8925266 300 SUPERFAMILY SSF161098 60 286 9.81E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu3351 3a65cf6aca6f7983e0a89ef7b8925266 300 Gene3D G3DSA:1.10.3720.10 56 293 3.0E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu3351 3a65cf6aca6f7983e0a89ef7b8925266 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 286 1.2E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1290 357efab3cf4f879b977a30881c9c5119 202 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1290 357efab3cf4f879b977a30881c9c5119 202 Gene3D G3DSA:3.40.50.300 1 202 4.4E-56 T 14-10-2018 Atu1290 357efab3cf4f879b977a30881c9c5119 202 SUPERFAMILY SSF52540 2 201 2.53E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1290 357efab3cf4f879b977a30881c9c5119 202 SMART SM00382 10 198 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1290 357efab3cf4f879b977a30881c9c5119 202 Pfam PF00005 ABC transporter 2 149 3.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0976 9e664a7abcef69690656151b75e46857 198 Pfam PF03918 Cytochrome C biogenesis protein 56 195 1.8E-52 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Atu0976 9e664a7abcef69690656151b75e46857 198 Gene3D G3DSA:1.10.8.640 66 147 5.4E-30 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Atu3235 ecd727789b92d13dfc8abb3d06f3b747 350 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 1.2E-20 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Atu3235 ecd727789b92d13dfc8abb3d06f3b747 350 SUPERFAMILY SSF51658 8 323 3.73E-64 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3235 ecd727789b92d13dfc8abb3d06f3b747 350 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 2.3E-38 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu3235 ecd727789b92d13dfc8abb3d06f3b747 350 Gene3D G3DSA:3.20.20.150 18 325 5.3E-71 T 14-10-2018 Atu0403 c56af0ed8e0130bbfbdf8f2485b64fe2 242 SUPERFAMILY SSF53474 4 238 1.31E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0403 c56af0ed8e0130bbfbdf8f2485b64fe2 242 Pfam PF00756 Putative esterase 75 236 1.4E-6 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Atu0403 c56af0ed8e0130bbfbdf8f2485b64fe2 242 Gene3D G3DSA:3.40.50.1820 19 242 7.5E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0503 da76640081b0bf2be047cfc44a6a8751 738 Gene3D G3DSA:1.10.1040.50 511 720 1.7E-56 T 14-10-2018 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 215 4.0E-29 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 329 508 1.6E-58 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 SUPERFAMILY SSF48179 637 725 1.79E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 SUPERFAMILY SSF51735 326 508 1.51E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0503 da76640081b0bf2be047cfc44a6a8751 738 SUPERFAMILY SSF52096 1 319 5.28E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu0503 da76640081b0bf2be047cfc44a6a8751 738 Gene3D G3DSA:3.40.50.720 327 510 2.3E-61 T 14-10-2018 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 Gene3D G3DSA:3.90.226.10 1 326 6.6E-94 T 14-10-2018 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 510 607 6.2E-22 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu0503 da76640081b0bf2be047cfc44a6a8751 738 SUPERFAMILY SSF48179 509 623 1.62E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 Pfam PF00580 UvrD/REP helicase N-terminal domain 56 325 6.9E-72 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 Gene3D G3DSA:1.10.486.10 437 592 5.6E-109 T 14-10-2018 Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 Gene3D G3DSA:3.40.50.300 333 680 5.6E-109 T 14-10-2018 Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 SUPERFAMILY SSF52540 48 689 2.28E-174 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 Pfam PF13361 UvrD-like helicase C-terminal domain 330 657 2.3E-62 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 Gene3D G3DSA:1.10.10.160 158 238 1.2E-94 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Atu2057 20fb4f22a85e57fa90c85f5ea346f61a 824 Gene3D G3DSA:3.40.50.300 56 325 1.2E-94 T 14-10-2018 Atu2432 6f4e6efbe9326ac1d98dbb141551c0e5 89 Pfam PF06348 Protein of unknown function (DUF1059) 37 79 1.2E-9 T 14-10-2018 IPR009409 Protein of unknown function DUF1059 Atu3066 bebe714fc62e4447d8fbc3d6ba531ec4 355 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 28 36 - T 14-10-2018 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 Atu3066 bebe714fc62e4447d8fbc3d6ba531ec4 355 Gene3D G3DSA:3.20.20.140 2 354 2.9E-133 T 14-10-2018 Atu3066 bebe714fc62e4447d8fbc3d6ba531ec4 355 SUPERFAMILY SSF51556 14 352 1.99E-92 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3066 bebe714fc62e4447d8fbc3d6ba531ec4 355 Pfam PF02126 Phosphotriesterase family 22 352 1.4E-71 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 Atu3066 bebe714fc62e4447d8fbc3d6ba531ec4 355 PIRSF PIRSF016839 13 57 0.53 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 Atu3066 bebe714fc62e4447d8fbc3d6ba531ec4 355 PIRSF PIRSF016839 65 355 3.6E-54 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 196 68.374 T 14-10-2018 IPR017757 Transcriptional repressor BetI Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 Gene3D G3DSA:1.10.357.10 4 192 3.3E-46 T 14-10-2018 Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 9.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 4 189 1.2E-71 T 14-10-2018 IPR017757 Transcriptional repressor BetI Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 188 3.4E-28 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 SUPERFAMILY SSF46689 3 86 1.69E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2059 167924fa2e9d28a80a029c1fe2f3defb 197 SUPERFAMILY SSF48498 81 186 2.07E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 Gene3D G3DSA:3.40.190.290 76 278 3.3E-28 T 14-10-2018 Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 44 2.5E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 SUPERFAMILY SSF46785 2 61 2.18E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 1 12 5.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 12 22 5.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 Gene3D G3DSA:1.10.10.10 1 75 2.8E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 SUPERFAMILY SSF53850 74 279 2.99E-35 T 14-10-2018 Atu6029 b1896f30d42778e6d730e03fd4e17f16 282 Pfam PF03466 LysR substrate binding domain 72 274 5.2E-36 T 14-10-2018 IPR005119 LysR, substrate-binding Atu8091 4a53cecbd2027c07228494736a9bf74d 174 Pfam PF08002 Protein of unknown function (DUF1697) 1 134 3.7E-30 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 Atu8091 4a53cecbd2027c07228494736a9bf74d 174 PIRSF PIRSF008502 1 174 1.5E-55 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 Atu8091 4a53cecbd2027c07228494736a9bf74d 174 SUPERFAMILY SSF160379 1 173 3.14E-39 T 14-10-2018 Atu8091 4a53cecbd2027c07228494736a9bf74d 174 Gene3D G3DSA:3.30.70.1280 1 88 2.8E-14 T 14-10-2018 Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 SUPERFAMILY SSF46785 6 88 2.17E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 Gene3D G3DSA:1.10.10.10 5 72 3.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 Pfam PF07729 FCD domain 81 207 7.1E-17 T 14-10-2018 IPR011711 GntR, C-terminal Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 SUPERFAMILY SSF48008 76 214 5.23E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 Gene3D G3DSA:1.20.120.530 75 221 8.7E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 SMART SM00345 13 71 6.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 SMART SM00895 81 207 8.7E-9 T 14-10-2018 IPR011711 GntR, C-terminal Atu4118 ffe670a64d7a7df13c9210f13c72b077 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 1.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3028 9fa4fbfc6a6311b3fe7ff464244a47eb 265 Gene3D G3DSA:3.20.20.150 5 251 1.0E-30 T 14-10-2018 Atu3028 9fa4fbfc6a6311b3fe7ff464244a47eb 265 Pfam PF01261 Xylose isomerase-like TIM barrel 48 215 1.6E-15 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu3028 9fa4fbfc6a6311b3fe7ff464244a47eb 265 SUPERFAMILY SSF51658 8 259 1.76E-28 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu2817 7322edb307cd63e3e107058e6220eea2 313 Gene3D G3DSA:3.40.50.2300 132 303 8.3E-96 T 14-10-2018 Atu2817 7322edb307cd63e3e107058e6220eea2 313 Gene3D G3DSA:3.40.50.2300 31 294 8.3E-96 T 14-10-2018 Atu2817 7322edb307cd63e3e107058e6220eea2 313 SUPERFAMILY SSF53822 26 308 2.54E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu2817 7322edb307cd63e3e107058e6220eea2 313 Pfam PF13407 Periplasmic binding protein domain 26 286 8.2E-57 T 14-10-2018 IPR025997 Periplasmic binding protein Atu1105 7df2f0fc1ee2494239efc9d820a749f5 315 SUPERFAMILY SSF109998 37 202 3.92E-29 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atu1105 7df2f0fc1ee2494239efc9d820a749f5 315 Gene3D G3DSA:1.10.4030.30 41 275 5.7E-24 T 14-10-2018 Atu1105 7df2f0fc1ee2494239efc9d820a749f5 315 Pfam PF13624 SurA N-terminal domain 1 142 9.0E-9 T 14-10-2018 Atu1105 7df2f0fc1ee2494239efc9d820a749f5 315 Gene3D G3DSA:3.10.50.40 173 271 5.7E-24 T 14-10-2018 Atu4044 2d223ed372950aeed139778ebdb4fe66 353 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4044 2d223ed372950aeed139778ebdb4fe66 353 SUPERFAMILY SSF54631 293 339 3.54E-6 T 14-10-2018 Atu4044 2d223ed372950aeed139778ebdb4fe66 353 SUPERFAMILY SSF52540 37 271 5.97E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4044 2d223ed372950aeed139778ebdb4fe66 353 Pfam PF00005 ABC transporter 45 193 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4044 2d223ed372950aeed139778ebdb4fe66 353 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 40 337 4.2E-104 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Atu4044 2d223ed372950aeed139778ebdb4fe66 353 SMART SM00382 54 243 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4044 2d223ed372950aeed139778ebdb4fe66 353 Gene3D G3DSA:3.40.50.300 31 317 8.0E-71 T 14-10-2018 Atu1579 eeebe64cc421eb20270d6c1731eb1827 385 Gene3D G3DSA:1.10.3720.10 164 383 7.6E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu1579 eeebe64cc421eb20270d6c1731eb1827 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 191 369 1.9E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1579 eeebe64cc421eb20270d6c1731eb1827 385 SUPERFAMILY SSF161098 171 360 2.75E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu1579 eeebe64cc421eb20270d6c1731eb1827 385 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 171 269 1.0E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu3246 18225a0b0cc5cffb02d619d825e4ef83 300 SMART SM00062 38 271 1.5E-40 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3246 18225a0b0cc5cffb02d619d825e4ef83 300 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 269 2.2E-46 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3246 18225a0b0cc5cffb02d619d825e4ef83 300 SUPERFAMILY SSF53850 1 271 5.09E-54 T 14-10-2018 Atu3246 18225a0b0cc5cffb02d619d825e4ef83 300 Gene3D G3DSA:3.40.190.10 29 274 2.0E-83 T 14-10-2018 Atu3246 18225a0b0cc5cffb02d619d825e4ef83 300 Gene3D G3DSA:3.40.190.10 132 227 2.0E-83 T 14-10-2018 Atu1066 c135521fc5fcf8cbaf47eb1831485cda 211 SUPERFAMILY SSF102405 12 192 6.26E-61 T 14-10-2018 Atu1066 c135521fc5fcf8cbaf47eb1831485cda 211 Pfam PF03641 Possible lysine decarboxylase 58 189 3.4E-41 T 14-10-2018 IPR031100 LOG family Atu1066 c135521fc5fcf8cbaf47eb1831485cda 211 Gene3D G3DSA:3.40.50.450 4 193 1.6E-72 T 14-10-2018 Atu1066 c135521fc5fcf8cbaf47eb1831485cda 211 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 15 191 1.8E-56 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 Gene3D G3DSA:2.170.8.10 43 333 1.0E-218 T 14-10-2018 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 Gene3D G3DSA:3.90.228.20 217 516 1.0E-218 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 Pfam PF01293 Phosphoenolpyruvate carboxykinase 23 482 1.4E-215 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 PIRSF PIRSF006294 6 531 5.5E-230 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 17 531 55.614 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 17 529 5.2E-205 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 Gene3D G3DSA:3.40.449.10 33 216 1.0E-218 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 253 268 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 SUPERFAMILY SSF53795 216 529 2.52E-134 T 14-10-2018 Atu0035 d0ca37a6b1795ed1828b6e0f74b1d464 536 SUPERFAMILY SSF68923 11 215 5.23E-79 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Atu0126 ff8539b897e54defc537629a0dd2aceb 330 Gene3D G3DSA:3.40.50.2300 125 317 1.2E-93 T 14-10-2018 Atu0126 ff8539b897e54defc537629a0dd2aceb 330 Gene3D G3DSA:3.40.50.2300 26 281 1.2E-93 T 14-10-2018 Atu0126 ff8539b897e54defc537629a0dd2aceb 330 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 35 309 4.1E-57 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Atu0126 ff8539b897e54defc537629a0dd2aceb 330 SUPERFAMILY SSF53822 35 272 5.3E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5139 d0a25a707a235b2151233b458ecdafd9 256 SMART SM00849 27 240 1.2E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu5139 d0a25a707a235b2151233b458ecdafd9 256 Gene3D G3DSA:3.60.15.10 1 256 2.9E-70 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5139 d0a25a707a235b2151233b458ecdafd9 256 SUPERFAMILY SSF56281 30 247 1.9E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5139 d0a25a707a235b2151233b458ecdafd9 256 Pfam PF00753 Metallo-beta-lactamase superfamily 27 240 2.2E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu1331 0e8fe902d98970247950766ec5df7c5c 162 Pfam PF00364 Biotin-requiring enzyme 88 161 8.6E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Atu1331 0e8fe902d98970247950766ec5df7c5c 162 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Atu1331 0e8fe902d98970247950766ec5df7c5c 162 SUPERFAMILY SSF51230 87 162 4.71E-23 T 14-10-2018 IPR011053 Single hybrid motif Atu1331 0e8fe902d98970247950766ec5df7c5c 162 Gene3D G3DSA:2.40.50.100 85 162 5.4E-28 T 14-10-2018 Atu1331 0e8fe902d98970247950766ec5df7c5c 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 1.7E-13 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu1331 0e8fe902d98970247950766ec5df7c5c 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 1.7E-13 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu1331 0e8fe902d98970247950766ec5df7c5c 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 1.7E-13 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu1331 0e8fe902d98970247950766ec5df7c5c 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 12 162 4.9E-46 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Atu0837 d13a4bb913d2c57f0a2c6e560aee66f6 171 SUPERFAMILY SSF46785 30 155 6.61E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0837 d13a4bb913d2c57f0a2c6e560aee66f6 171 Pfam PF12802 MarR family 45 104 1.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0837 d13a4bb913d2c57f0a2c6e560aee66f6 171 Gene3D G3DSA:1.10.10.10 5 156 2.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0837 d13a4bb913d2c57f0a2c6e560aee66f6 171 SMART SM00347 39 140 6.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 Gene3D G3DSA:1.20.1560.10 6 329 4.3E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 SUPERFAMILY SSF52540 335 582 2.55E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 Pfam PF00005 ABC transporter 362 511 3.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 Pfam PF00664 ABC transporter transmembrane region 32 293 4.0E-36 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 SUPERFAMILY SSF90123 16 335 9.81E-62 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 SMART SM00382 371 557 8.1E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4600 ea632b9a6b8ebccd357788a3d446e8ca 587 Gene3D G3DSA:3.40.50.300 338 585 1.2E-92 T 14-10-2018 Atu1209 45cd79f836b654d63566b4048e726d10 322 SUPERFAMILY SSF53850 92 299 1.55E-27 T 14-10-2018 Atu1209 45cd79f836b654d63566b4048e726d10 322 SUPERFAMILY SSF46785 6 92 1.2E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1209 45cd79f836b654d63566b4048e726d10 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1209 45cd79f836b654d63566b4048e726d10 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1209 45cd79f836b654d63566b4048e726d10 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1209 45cd79f836b654d63566b4048e726d10 322 Pfam PF03466 LysR substrate binding domain 92 296 4.9E-28 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1209 45cd79f836b654d63566b4048e726d10 322 Gene3D G3DSA:3.40.190.290 97 275 3.3E-25 T 14-10-2018 Atu1209 45cd79f836b654d63566b4048e726d10 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 67 1.7E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1209 45cd79f836b654d63566b4048e726d10 322 Gene3D G3DSA:1.10.10.10 4 89 3.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 SUPERFAMILY SSF90002 243 337 1.2E-18 T 14-10-2018 Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 Gene3D G3DSA:3.30.1220.10 224 339 1.8E-13 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 Gene3D G3DSA:3.40.50.300 1 209 2.2E-50 T 14-10-2018 Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 2 186 2.7E-39 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 SMART SM00833 243 338 9.9E-26 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 244 336 7.7E-15 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu3184 7d69917b812f7a2f72751e8c61a0de00 347 SUPERFAMILY SSF52540 2 198 1.17E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1920 764d5fbcaa7b947299c4cb5c878c011d 215 Pfam PF01794 Ferric reductase like transmembrane component 54 166 4.4E-14 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Atu1920 764d5fbcaa7b947299c4cb5c878c011d 215 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 14 206 20.606 T 14-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 Atu1790 80fef1771cc9ebeab3dc7fee85a7982a 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 280 5.9E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu3854 8f26fe70c13661d36e80c61369e3253c 699 Gene3D G3DSA:3.40.50.300 368 589 3.8E-36 T 14-10-2018 Atu3854 8f26fe70c13661d36e80c61369e3253c 699 SUPERFAMILY SSF52540 374 556 1.05E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3854 8f26fe70c13661d36e80c61369e3253c 699 Pfam PF13481 AAA domain 357 534 3.9E-45 T 14-10-2018 Atu3854 8f26fe70c13661d36e80c61369e3253c 699 SMART SM00382 381 558 1.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2340 56bd41fe3e9fdd2720001056ccaaa89b 273 Pfam PF01841 Transglutaminase-like superfamily 121 219 9.8E-26 T 14-10-2018 IPR002931 Transglutaminase-like Atu2340 56bd41fe3e9fdd2720001056ccaaa89b 273 SMART SM00460 157 221 6.4E-17 T 14-10-2018 IPR002931 Transglutaminase-like Atu2340 56bd41fe3e9fdd2720001056ccaaa89b 273 SUPERFAMILY SSF54001 7 248 1.22E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu2340 56bd41fe3e9fdd2720001056ccaaa89b 273 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 80 1.5E-20 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Atu2340 56bd41fe3e9fdd2720001056ccaaa89b 273 Gene3D G3DSA:3.10.620.30 91 252 7.1E-43 T 14-10-2018 Atu4049 534a562208f7ac8197fd7717362266cf 797 Pfam PF13807 G-rich domain on putative tyrosine kinase 426 490 4.4E-9 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain Atu4049 534a562208f7ac8197fd7717362266cf 797 Gene3D G3DSA:3.40.50.300 490 786 1.1E-55 T 14-10-2018 Atu4049 534a562208f7ac8197fd7717362266cf 797 SUPERFAMILY SSF52540 587 769 4.32E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4049 534a562208f7ac8197fd7717362266cf 797 Pfam PF02706 Chain length determinant protein 38 127 1.6E-12 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Atu4049 534a562208f7ac8197fd7717362266cf 797 TIGRFAM TIGR01005 eps_transp_fam: exopolysaccharide transport protein family 35 796 1.2E-210 T 14-10-2018 IPR005700 Exopolysaccharide biosynthesis protein ExoP-like GO:0045226 Atu4049 534a562208f7ac8197fd7717362266cf 797 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 577 765 1.7E-32 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Atu4049 534a562208f7ac8197fd7717362266cf 797 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 589 761 6.3E-8 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 Pfam PF00486 Transcriptional regulatory protein, C terminal 135 208 2.1E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 SMART SM00448 1 101 3.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 SUPERFAMILY SSF52172 2 163 1.22E-26 T 14-10-2018 IPR011006 CheY-like superfamily Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 Pfam PF00072 Response regulator receiver domain 5 101 2.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 Gene3D G3DSA:3.40.50.2300 1 110 1.8E-28 T 14-10-2018 Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 SMART SM00862 134 209 1.4E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2536 916776b61d17f3bd17b6d39cd5888d7a 213 Gene3D G3DSA:1.10.10.10 112 213 1.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6168 4b9530fdad8c54d40d39341c7ec661fe 121 Pfam PF04956 TrbC/VIRB2 family 31 117 2.6E-18 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Atu1458 10ae95933e0bd325853e664de6ed20d9 270 Gene3D G3DSA:3.40.50.80 114 267 3.8E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu1458 10ae95933e0bd325853e664de6ed20d9 270 SUPERFAMILY SSF63380 18 113 1.54E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu1458 10ae95933e0bd325853e664de6ed20d9 270 SUPERFAMILY SSF52343 117 267 1.31E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu1458 10ae95933e0bd325853e664de6ed20d9 270 Gene3D G3DSA:2.40.30.10 5 110 1.2E-27 T 14-10-2018 Atu1458 10ae95933e0bd325853e664de6ed20d9 270 Pfam PF00970 Oxidoreductase FAD-binding domain 32 112 8.2E-6 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 6 279 5.0E-57 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 Pfam PF01678 Diaminopimelate epimerase 7 123 2.1E-15 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 Pfam PF01678 Diaminopimelate epimerase 159 276 2.8E-18 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 Gene3D G3DSA:3.10.310.10 116 273 2.6E-68 T 14-10-2018 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 SUPERFAMILY SSF54506 5 131 1.15E-31 T 14-10-2018 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 5 284 32.133 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 SUPERFAMILY SSF54506 144 282 6.12E-40 T 14-10-2018 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Atu2695 6af5e58a2333039e41fa2d57e854044a 299 Gene3D G3DSA:3.10.310.10 7 275 2.6E-68 T 14-10-2018 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 SUPERFAMILY SSF47917 380 508 6.02E-48 T 14-10-2018 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Gene3D G3DSA:2.40.30.20 1 93 3.6E-41 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 SUPERFAMILY SSF50615 10 94 7.32E-31 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Gene3D G3DSA:3.40.50.300 94 379 1.6E-129 T 14-10-2018 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 PIRSF PIRSF039088 1 509 4.4E-282 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 1.4E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Gene3D G3DSA:1.20.150.20 380 509 4.7E-55 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 8.7E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 2.2E-49 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 SUPERFAMILY SSF52540 96 378 3.06E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2624 805687f4164de1a25b1d5cd54be3300d 509 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 508 9.1E-250 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 51.858 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2624 805687f4164de1a25b1d5cd54be3300d 509 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Atu5189 a4607546b5ef9915d09645435e19c2fd 110 Gene3D G3DSA:3.30.70.100 1 94 5.5E-26 T 14-10-2018 Atu5189 a4607546b5ef9915d09645435e19c2fd 110 SUPERFAMILY SSF54909 1 93 9.66E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu5189 a4607546b5ef9915d09645435e19c2fd 110 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 8.8E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu2516 b7e30fb09582e58dba933148fe2e04e4 300 SUPERFAMILY SSF161098 94 281 5.23E-26 T 14-10-2018 IPR035906 MetI-like superfamily Atu2516 b7e30fb09582e58dba933148fe2e04e4 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 70 1.3E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu2516 b7e30fb09582e58dba933148fe2e04e4 300 Gene3D G3DSA:1.10.3720.10 88 296 6.3E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu2516 b7e30fb09582e58dba933148fe2e04e4 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 298 1.1E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3783 dc780bbca0aec320008dfadafe694e97 484 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 483 3.8E-180 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 Atu3783 dc780bbca0aec320008dfadafe694e97 484 SUPERFAMILY SSF46548 2 155 7.85E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atu3783 dc780bbca0aec320008dfadafe694e97 484 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 9.7E-23 T 14-10-2018 Atu3783 dc780bbca0aec320008dfadafe694e97 484 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 9.7E-23 T 14-10-2018 Atu3783 dc780bbca0aec320008dfadafe694e97 484 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 9.7E-23 T 14-10-2018 Atu3783 dc780bbca0aec320008dfadafe694e97 484 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 9.7E-23 T 14-10-2018 Atu3783 dc780bbca0aec320008dfadafe694e97 484 Gene3D G3DSA:1.10.1060.10 9 143 2.6E-25 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atu3783 dc780bbca0aec320008dfadafe694e97 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 465 8.2E-19 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu3783 dc780bbca0aec320008dfadafe694e97 484 Gene3D G3DSA:3.50.50.60 254 402 7.0E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3783 dc780bbca0aec320008dfadafe694e97 484 SUPERFAMILY SSF51971 373 482 8.24E-9 T 14-10-2018 Atu3783 dc780bbca0aec320008dfadafe694e97 484 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 4.6E-26 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Atu3783 dc780bbca0aec320008dfadafe694e97 484 Gene3D G3DSA:3.50.50.60 144 253 1.2E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3783 dc780bbca0aec320008dfadafe694e97 484 SUPERFAMILY SSF51971 144 403 7.06E-64 T 14-10-2018 Atu5466 b59953a163249ea286a92835d810f9ff 637 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 637 32.074 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup Atu5466 b59953a163249ea286a92835d810f9ff 637 Pfam PF02705 K+ potassium transporter 23 559 6.4E-193 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 Atu1135 317d6bd618239c8b17a954f72266b3af 287 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 278 1.5E-85 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Atu1135 317d6bd618239c8b17a954f72266b3af 287 SUPERFAMILY SSF53335 8 279 4.17E-92 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1135 317d6bd618239c8b17a954f72266b3af 287 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 267 40.387 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Atu1135 317d6bd618239c8b17a954f72266b3af 287 Gene3D G3DSA:3.40.50.150 1 287 6.8E-105 T 14-10-2018 Atu1135 317d6bd618239c8b17a954f72266b3af 287 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 242 248 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu1198 3d0a4b75dddbf514a8b7c10b6d8e31ed 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 309 1.1E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1198 3d0a4b75dddbf514a8b7c10b6d8e31ed 314 SUPERFAMILY SSF161098 95 294 7.63E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu1198 3d0a4b75dddbf514a8b7c10b6d8e31ed 314 Gene3D G3DSA:1.10.3720.10 90 301 1.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu8169 5e86fd72e3f2599fc4a551ea7a4411a7 160 Gene3D G3DSA:3.30.530.20 2 160 1.2E-35 T 14-10-2018 IPR023393 START-like domain superfamily Atu8169 5e86fd72e3f2599fc4a551ea7a4411a7 160 SUPERFAMILY SSF55961 6 157 8.76E-36 T 14-10-2018 Atu8169 5e86fd72e3f2599fc4a551ea7a4411a7 160 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 155 6.6E-26 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Atu0792 943ab6b21b5ae4288adf080bc93d3eb5 154 Pfam PF06935 Protein of unknown function (DUF1284) 8 113 4.2E-16 T 14-10-2018 IPR009702 Protein of unknown function DUF1284 Atu5064 7d6987e000741be860d66530ea8d2bc5 150 SUPERFAMILY SSF46785 10 148 2.84E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5064 7d6987e000741be860d66530ea8d2bc5 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 3.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5064 7d6987e000741be860d66530ea8d2bc5 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 3.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5064 7d6987e000741be860d66530ea8d2bc5 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 3.0E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5064 7d6987e000741be860d66530ea8d2bc5 150 SMART SM00347 36 134 4.7E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5064 7d6987e000741be860d66530ea8d2bc5 150 Pfam PF01047 MarR family 43 101 8.5E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5064 7d6987e000741be860d66530ea8d2bc5 150 Gene3D G3DSA:1.10.10.10 8 149 2.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1646 52725a0025dd40520d29a44c7cbbcbd7 278 Gene3D G3DSA:3.40.50.300 19 268 7.9E-65 T 14-10-2018 Atu1646 52725a0025dd40520d29a44c7cbbcbd7 278 SMART SM00382 46 235 2.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1646 52725a0025dd40520d29a44c7cbbcbd7 278 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1646 52725a0025dd40520d29a44c7cbbcbd7 278 SUPERFAMILY SSF52540 20 248 6.56E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1646 52725a0025dd40520d29a44c7cbbcbd7 278 Pfam PF00005 ABC transporter 37 187 2.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1212 e3ea20afef33b91b002592eadb0cdf70 155 PIRSF PIRSF034110 1 155 1.0E-64 T 14-10-2018 IPR009593 Protein of unknown function DUF1203 Atu1212 e3ea20afef33b91b002592eadb0cdf70 155 Pfam PF06718 Protein of unknown function (DUF1203) 37 153 3.5E-36 T 14-10-2018 IPR009593 Protein of unknown function DUF1203 Atu3676 a368accd10caf4ca09b623d3abfb99c4 298 Pfam PF13649 Methyltransferase domain 49 140 1.0E-20 T 14-10-2018 Atu3676 a368accd10caf4ca09b623d3abfb99c4 298 Gene3D G3DSA:3.40.50.150 3 171 1.9E-41 T 14-10-2018 Atu3676 a368accd10caf4ca09b623d3abfb99c4 298 SUPERFAMILY SSF53335 12 267 1.61E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 360 369 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 358 367 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 105 116 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 151 167 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 211 233 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 292 303 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 168 183 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 337 352 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 309 336 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 PRINTS PR00359 B-class P450 signature 367 378 1.9E-43 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 Gene3D G3DSA:1.10.630.10 4 415 2.9E-109 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 Pfam PF00067 Cytochrome P450 96 264 1.8E-7 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 Pfam PF00067 Cytochrome P450 290 387 2.1E-19 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu1256 c6a076f1ac082b547321a99ebb1bccf5 415 SUPERFAMILY SSF48264 23 408 5.63E-80 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Atu3798 0294e03591fbcaae08078201e1d07aa6 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 5.9E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3798 0294e03591fbcaae08078201e1d07aa6 204 SUPERFAMILY SSF46689 7 89 1.7E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3798 0294e03591fbcaae08078201e1d07aa6 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 5.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3798 0294e03591fbcaae08078201e1d07aa6 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 5.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3798 0294e03591fbcaae08078201e1d07aa6 204 Gene3D G3DSA:1.10.357.10 62 204 2.6E-19 T 14-10-2018 Atu3798 0294e03591fbcaae08078201e1d07aa6 204 SUPERFAMILY SSF48498 86 203 1.72E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu3798 0294e03591fbcaae08078201e1d07aa6 204 Gene3D G3DSA:1.10.10.60 1 61 1.2E-20 T 14-10-2018 Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 Gene3D G3DSA:3.30.63.10 46 105 3.4E-65 T 14-10-2018 Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 ProSitePatterns PS00856 Guanylate kinase-like signature. 49 66 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 Hamap MF_00328 Guanylate kinase [gmk]. 13 197 36.386 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 Gene3D G3DSA:3.40.50.300 19 193 3.4E-65 T 14-10-2018 Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 16 194 8.2E-72 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 SUPERFAMILY SSF52540 13 199 5.77E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 SMART SM00072 14 197 2.6E-57 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Atu1101 21bd7d8772289476d19d48e8590f2c7f 220 Pfam PF00625 Guanylate kinase 17 195 6.8E-48 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Atu1941 acfe25d172171ebe2d76c706299db2d2 129 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 26.001 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1941 acfe25d172171ebe2d76c706299db2d2 129 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 2.1E-34 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1941 acfe25d172171ebe2d76c706299db2d2 129 Gene3D G3DSA:3.90.470.10 1 129 1.4E-43 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1941 acfe25d172171ebe2d76c706299db2d2 129 SUPERFAMILY SSF54843 5 124 1.57E-41 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Atu1941 acfe25d172171ebe2d76c706299db2d2 129 Pfam PF00237 Ribosomal protein L22p/L17e 17 119 1.8E-33 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Atu1941 acfe25d172171ebe2d76c706299db2d2 129 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu2263 c3b7a00a579279ccbbe113b38ab0c24e 316 Gene3D G3DSA:3.60.21.10 2 255 2.0E-27 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu2263 c3b7a00a579279ccbbe113b38ab0c24e 316 Pfam PF00149 Calcineurin-like phosphoesterase 2 230 2.4E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu2263 c3b7a00a579279ccbbe113b38ab0c24e 316 SUPERFAMILY SSF56300 2 275 6.03E-38 T 14-10-2018 Atu1480 86c3e1928367a2ae8527b386c3407289 218 Pfam PF00578 AhpC/TSA family 5 143 1.2E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atu1480 86c3e1928367a2ae8527b386c3407289 218 Gene3D G3DSA:3.30.1020.10 155 217 2.2E-22 T 14-10-2018 Atu1480 86c3e1928367a2ae8527b386c3407289 218 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 165 202 1.1E-13 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atu1480 86c3e1928367a2ae8527b386c3407289 218 PIRSF PIRSF000239 1 216 1.7E-73 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Atu1480 86c3e1928367a2ae8527b386c3407289 218 Gene3D G3DSA:3.40.30.10 1 154 1.6E-50 T 14-10-2018 Atu1480 86c3e1928367a2ae8527b386c3407289 218 SUPERFAMILY SSF52833 3 215 1.8E-68 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 Pfam PF13481 AAA domain 84 221 1.7E-18 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 Gene3D G3DSA:3.30.230.10 300 464 2.7E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 SUPERFAMILY SSF52540 64 289 3.66E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 SUPERFAMILY SSF54211 254 451 3.79E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 Gene3D G3DSA:3.40.50.300 64 287 1.9E-46 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 Hamap MF_01498 DNA repair protein RadA [radA]. 21 454 43.846 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 173 197 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 80 108 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 247 273 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 321 344 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 10 34 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 212 240 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 PRINTS PR01874 DNA repair protein radA signature 122 139 3.0E-88 T 14-10-2018 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 431 5.9E-164 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 SMART SM00382 88 243 3.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1077 3f3d6f9c6c2786e6f38a0fbfb953d242 468 Pfam PF13541 Subunit ChlI of Mg-chelatase 341 427 6.7E-8 T 14-10-2018 Atu3802 0b39c356aeb6325d2c64ccddec53147f 277 Pfam PF00005 ABC transporter 43 191 4.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3802 0b39c356aeb6325d2c64ccddec53147f 277 SUPERFAMILY SSF52540 42 266 6.61E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3802 0b39c356aeb6325d2c64ccddec53147f 277 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3802 0b39c356aeb6325d2c64ccddec53147f 277 Gene3D G3DSA:3.40.50.300 35 276 1.0E-71 T 14-10-2018 Atu3802 0b39c356aeb6325d2c64ccddec53147f 277 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 266 1.2E-104 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Atu3802 0b39c356aeb6325d2c64ccddec53147f 277 SMART SM00382 52 240 6.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4534 e9a4b81bd3f8b7a9e88b93b332239638 278 SMART SM00062 43 262 2.6E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4534 e9a4b81bd3f8b7a9e88b93b332239638 278 Gene3D G3DSA:3.40.190.10 33 264 4.4E-50 T 14-10-2018 Atu4534 e9a4b81bd3f8b7a9e88b93b332239638 278 Gene3D G3DSA:3.40.190.10 130 220 4.4E-50 T 14-10-2018 Atu4534 e9a4b81bd3f8b7a9e88b93b332239638 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 260 7.0E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4534 e9a4b81bd3f8b7a9e88b93b332239638 278 SUPERFAMILY SSF53850 39 264 8.34E-52 T 14-10-2018 Atu4564 f50debee88150566710263de1a1400a8 426 SUPERFAMILY SSF53850 25 416 2.01E-44 T 14-10-2018 Atu4564 f50debee88150566710263de1a1400a8 426 Pfam PF13416 Bacterial extracellular solute-binding protein 47 343 1.7E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4564 f50debee88150566710263de1a1400a8 426 Gene3D G3DSA:3.40.190.10 23 423 1.5E-48 T 14-10-2018 Atu1140 f755ecfefa321ec6b356003c7a27dad2 201 SUPERFAMILY SSF53328 2 190 1.31E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu1140 f755ecfefa321ec6b356003c7a27dad2 201 Pfam PF00551 Formyl transferase 4 167 4.7E-53 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu1140 f755ecfefa321ec6b356003c7a27dad2 201 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 178 8.4E-62 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Atu1140 f755ecfefa321ec6b356003c7a27dad2 201 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 120 143 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu1140 f755ecfefa321ec6b356003c7a27dad2 201 Gene3D G3DSA:3.40.50.170 1 186 1.7E-72 T 14-10-2018 Atu1140 f755ecfefa321ec6b356003c7a27dad2 201 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 1 174 26.901 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Atu5177 7968c7b84950155a112c3a3b040f07a2 397 Gene3D G3DSA:2.40.50.100 60 222 7.8E-85 T 14-10-2018 Atu5177 7968c7b84950155a112c3a3b040f07a2 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 264 2.0E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu5177 7968c7b84950155a112c3a3b040f07a2 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 378 6.2E-46 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu5177 7968c7b84950155a112c3a3b040f07a2 397 SUPERFAMILY SSF111369 52 263 6.41E-23 T 14-10-2018 Atu5177 7968c7b84950155a112c3a3b040f07a2 397 Gene3D G3DSA:2.40.420.20 44 377 7.8E-85 T 14-10-2018 Atu5177 7968c7b84950155a112c3a3b040f07a2 397 Gene3D G3DSA:2.40.30.170 49 315 7.8E-85 T 14-10-2018 Atu5177 7968c7b84950155a112c3a3b040f07a2 397 Gene3D G3DSA:1.10.287.470 94 185 7.8E-85 T 14-10-2018 Atu3602 7c335ffe5faf7d8706ab0ce8b0027431 902 Pfam PF13779 Domain of unknown function (DUF4175) 42 900 2.1E-292 T 14-10-2018 IPR012683 Conserved hypothetical protein CHP02302, transmembrane Atu3602 7c335ffe5faf7d8706ab0ce8b0027431 902 TIGRFAM TIGR02302 aProt_lowcomp: TIGR02302 family protein 31 901 0.0 T 14-10-2018 IPR012683 Conserved hypothetical protein CHP02302, transmembrane Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 SUPERFAMILY SSF74982 11 138 8.37E-51 T 14-10-2018 IPR023620 Small protein B Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 2.0E-45 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 Gene3D G3DSA:2.40.280.10 7 135 2.4E-49 T 14-10-2018 IPR023620 Small protein B Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 74.642 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 2.3E-58 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site Atu1025 05a8273abac5fea438c604d0bfb84aa9 160 Pfam PF01668 SmpB protein 14 156 1.1E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Atu2121 eac9c3e701156c664a21031c12133257 283 SUPERFAMILY SSF51445 76 280 1.58E-68 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu2121 eac9c3e701156c664a21031c12133257 283 SMART SM00641 78 182 3.7E-23 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Atu2121 eac9c3e701156c664a21031c12133257 283 Pfam PF01183 Glycosyl hydrolases family 25 81 259 1.9E-60 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Atu2121 eac9c3e701156c664a21031c12133257 283 Gene3D G3DSA:3.20.20.80 69 281 1.2E-68 T 14-10-2018 Atu4820 e691b249af2515f5521c8798d9a9b76b 297 SUPERFAMILY SSF117856 179 291 8.37E-14 T 14-10-2018 Atu4820 e691b249af2515f5521c8798d9a9b76b 297 SUPERFAMILY SSF117856 31 170 2.07E-18 T 14-10-2018 Atu4820 e691b249af2515f5521c8798d9a9b76b 297 Pfam PF03479 Domain of unknown function (DUF296) 187 291 9.5E-6 T 14-10-2018 IPR005175 PPC domain Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 SUPERFAMILY SSF52540 5 255 3.62E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 ProSitePatterns PS00211 ABC transporters family signature. 416 430 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 Pfam PF00005 ABC transporter 291 443 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 SMART SM00382 34 233 2.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 SMART SM00382 300 493 4.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 Pfam PF00005 ABC transporter 26 183 2.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 SUPERFAMILY SSF52540 275 515 4.39E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 Gene3D G3DSA:3.40.50.300 274 537 9.1E-92 T 14-10-2018 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 Gene3D G3DSA:3.40.50.300 3 273 2.9E-85 T 14-10-2018 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 495 527 1.1E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 262 1.1E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5068 7dfb9d8801d90881ddbf25752e2943ea 539 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5496 9d3ab5f4db6b25d080fba0b64e2320ca 180 Gene3D G3DSA:1.10.357.10 1 180 2.8E-55 T 14-10-2018 Atu5496 9d3ab5f4db6b25d080fba0b64e2320ca 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5496 9d3ab5f4db6b25d080fba0b64e2320ca 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5496 9d3ab5f4db6b25d080fba0b64e2320ca 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5496 9d3ab5f4db6b25d080fba0b64e2320ca 180 SUPERFAMILY SSF46689 3 79 6.48E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5496 9d3ab5f4db6b25d080fba0b64e2320ca 180 SUPERFAMILY SSF48498 77 179 7.78E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu0790 a8f973ac2ab7b0ede5bf5c26fbbf67e6 229 SUPERFAMILY SSF56784 4 219 1.13E-52 T 14-10-2018 IPR036412 HAD-like superfamily Atu0790 a8f973ac2ab7b0ede5bf5c26fbbf67e6 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 1.3E-23 T 14-10-2018 Atu0790 a8f973ac2ab7b0ede5bf5c26fbbf67e6 229 Gene3D G3DSA:1.10.150.240 19 85 1.4E-73 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu0790 a8f973ac2ab7b0ede5bf5c26fbbf67e6 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 185 1.5E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu0790 a8f973ac2ab7b0ede5bf5c26fbbf67e6 229 Gene3D G3DSA:3.40.50.1000 7 206 1.4E-73 T 14-10-2018 IPR023214 HAD superfamily Atu1333 552bf2bb7b33eafe7fa9d285043f6f83 255 Pfam PF01323 DSBA-like thioredoxin domain 98 243 6.9E-22 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Atu1333 552bf2bb7b33eafe7fa9d285043f6f83 255 SUPERFAMILY SSF52833 76 243 1.18E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1333 552bf2bb7b33eafe7fa9d285043f6f83 255 Gene3D G3DSA:3.40.30.10 75 248 3.7E-38 T 14-10-2018 Atu3018 ab64ffb2f72d624dbdf7d23bbaa940f2 127 SUPERFAMILY SSF54427 3 127 2.84E-25 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu3018 ab64ffb2f72d624dbdf7d23bbaa940f2 127 Gene3D G3DSA:3.10.450.50 1 127 1.3E-34 T 14-10-2018 Atu3018 ab64ffb2f72d624dbdf7d23bbaa940f2 127 Pfam PF07366 SnoaL-like polyketide cyclase 6 126 1.3E-33 T 14-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 8.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 8.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 8.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 8.6E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 240 1.9E-110 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 7.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 7.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 7.1E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 SUPERFAMILY SSF51735 3 239 3.81E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 6.0E-64 T 14-10-2018 Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 Gene3D G3DSA:3.40.50.720 1 239 6.2E-81 T 14-10-2018 Atu2770 7844f88acf5c8db211e1cf9c6cb28679 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 178 5.1E-5 T 14-10-2018 Atu0251 84cb4d539706b151b3b1c3ed91839b7b 327 Pfam PF02915 Rubrerythrin 20 156 8.6E-38 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Atu0251 84cb4d539706b151b3b1c3ed91839b7b 327 SUPERFAMILY SSF47240 10 161 3.54E-34 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu0251 84cb4d539706b151b3b1c3ed91839b7b 327 PIRSF PIRSF035918 4 327 4.5E-188 T 14-10-2018 IPR017040 Uncharacterised conserved protein UCP035918 , rubrerythrin/DUF125-related Atu0251 84cb4d539706b151b3b1c3ed91839b7b 327 Gene3D G3DSA:1.20.1260.10 12 160 5.1E-21 T 14-10-2018 IPR012347 Ferritin-like Atu0774 9bc185483d7188625c1bcfb4ed1ad38e 348 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 10 297 35.884 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Atu0774 9bc185483d7188625c1bcfb4ed1ad38e 348 Gene3D G3DSA:3.40.50.11270 21 108 1.7E-100 T 14-10-2018 Atu0774 9bc185483d7188625c1bcfb4ed1ad38e 348 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 11 295 1.5E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Atu0774 9bc185483d7188625c1bcfb4ed1ad38e 348 Pfam PF02401 LytB protein 13 293 2.7E-83 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Atu0774 9bc185483d7188625c1bcfb4ed1ad38e 348 Gene3D G3DSA:3.40.1010.20 17 291 1.7E-100 T 14-10-2018 Atu0774 9bc185483d7188625c1bcfb4ed1ad38e 348 Gene3D G3DSA:3.40.1010.20 109 206 1.7E-100 T 14-10-2018 Atu3668 b1cc8196510efae2377b76695111add6 173 SUPERFAMILY SSF46785 3 131 9.1E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3668 b1cc8196510efae2377b76695111add6 173 Pfam PF02082 Transcriptional regulator 1 82 3.2E-19 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu3668 b1cc8196510efae2377b76695111add6 173 Gene3D G3DSA:1.10.10.10 1 138 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0982 17545008785a1f821f6720a5912cc366 778 Gene3D G3DSA:1.10.287.130 509 612 1.9E-30 T 14-10-2018 Atu0982 17545008785a1f821f6720a5912cc366 778 SUPERFAMILY SSF55785 369 488 5.14E-9 T 14-10-2018 IPR035965 PAS domain superfamily Atu0982 17545008785a1f821f6720a5912cc366 778 SMART SM00388 545 614 6.6E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0982 17545008785a1f821f6720a5912cc366 778 SMART SM00387 659 771 5.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0982 17545008785a1f821f6720a5912cc366 778 Gene3D G3DSA:3.30.450.20 253 368 2.1E-16 T 14-10-2018 Atu0982 17545008785a1f821f6720a5912cc366 778 Gene3D G3DSA:3.30.565.10 613 771 1.3E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0982 17545008785a1f821f6720a5912cc366 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 659 769 5.7E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0982 17545008785a1f821f6720a5912cc366 778 SUPERFAMILY SSF47384 535 615 1.16E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0982 17545008785a1f821f6720a5912cc366 778 SMART SM00086 332 372 2.1E-6 T 14-10-2018 IPR001610 PAC motif Atu0982 17545008785a1f821f6720a5912cc366 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 545 614 6.5E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0982 17545008785a1f821f6720a5912cc366 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 755 768 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0982 17545008785a1f821f6720a5912cc366 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 710 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0982 17545008785a1f821f6720a5912cc366 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 731 749 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0982 17545008785a1f821f6720a5912cc366 778 SUPERFAMILY SSF55785 270 374 1.74E-11 T 14-10-2018 IPR035965 PAS domain superfamily Atu0982 17545008785a1f821f6720a5912cc366 778 Gene3D G3DSA:3.30.450.20 375 496 7.9E-8 T 14-10-2018 Atu0982 17545008785a1f821f6720a5912cc366 778 Pfam PF12860 PAS fold 390 494 6.2E-11 T 14-10-2018 Atu0982 17545008785a1f821f6720a5912cc366 778 SUPERFAMILY SSF55874 603 769 1.83E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0982 17545008785a1f821f6720a5912cc366 778 Pfam PF08447 PAS fold 281 364 1.6E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 Gene3D G3DSA:3.40.50.12780 79 521 9.9E-54 T 14-10-2018 Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 541 613 5.8E-8 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 8 651 1.2E-240 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 SUPERFAMILY SSF56801 29 643 3.01E-110 T 14-10-2018 Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 Pfam PF00501 AMP-binding enzyme 106 525 2.4E-39 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu4130 7315c32fec0ea0aae6ee37c75de6fd44 651 Gene3D G3DSA:3.30.300.30 525 646 2.6E-16 T 14-10-2018 Atu2196 66708972e3b8119b73442902608925d1 400 Gene3D G3DSA:3.90.1150.10 26 392 4.4E-137 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu2196 66708972e3b8119b73442902608925d1 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Atu2196 66708972e3b8119b73442902608925d1 400 Gene3D G3DSA:3.40.640.10 63 286 4.4E-137 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu2196 66708972e3b8119b73442902608925d1 400 Pfam PF00155 Aminotransferase class I and II 32 392 5.6E-83 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu2196 66708972e3b8119b73442902608925d1 400 SUPERFAMILY SSF53383 1 398 7.34E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3484 43a18bc0ef54b0515e0537f1ff7fff40 430 Gene3D G3DSA:3.20.20.150 1 421 1.6E-149 T 14-10-2018 Atu3484 43a18bc0ef54b0515e0537f1ff7fff40 430 SUPERFAMILY SSF51658 52 407 3.18E-82 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3484 43a18bc0ef54b0515e0537f1ff7fff40 430 TIGRFAM TIGR02629 L_rham_iso_rhiz: L-rhamnose catabolism isomerase 10 421 2.9E-260 T 14-10-2018 IPR013451 L-rhamnose catabolism isomerase Atu1864 4d9074c66773406eeddd207b3845a44d 212 PIRSF PIRSF006324 1 207 2.1E-62 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu1864 4d9074c66773406eeddd207b3845a44d 212 Pfam PF01810 LysE type translocator 15 201 5.7E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 SUPERFAMILY SSF46689 241 292 2.37E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 Gene3D G3DSA:1.10.10.60 239 294 6.5E-16 T 14-10-2018 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 SMART SM00342 205 288 9.8E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 3.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 3.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 SUPERFAMILY SSF46689 191 238 1.03E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 Pfam PF07883 Cupin domain 39 87 2.4E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 SUPERFAMILY SSF51182 25 91 6.43E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 Pfam PF12833 Helix-turn-helix domain 211 289 8.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 Gene3D G3DSA:1.10.10.60 191 238 8.3E-9 T 14-10-2018 Atu3152 cf3f5c5d9e561e013cad25bc6c420619 296 Gene3D G3DSA:2.60.120.10 6 94 1.7E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1133 42a7ee7f8183e3dc2d4c9e7d662ba033 252 SUPERFAMILY SSF55895 64 245 1.44E-43 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atu1133 42a7ee7f8183e3dc2d4c9e7d662ba033 252 Pfam PF00445 Ribonuclease T2 family 68 233 1.8E-18 T 14-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atu1133 42a7ee7f8183e3dc2d4c9e7d662ba033 252 Gene3D G3DSA:3.90.730.10 56 247 1.4E-37 T 14-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atu1133 42a7ee7f8183e3dc2d4c9e7d662ba033 252 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 100 107 - T 14-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 Gene3D G3DSA:1.20.200.10 200 511 1.8E-113 T 14-10-2018 Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 Pfam PF00221 Aromatic amino acid lyase 14 472 5.0E-180 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 5 506 46.11 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 SUPERFAMILY SSF48557 4 503 5.26E-187 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 508 5.1E-220 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 Gene3D G3DSA:1.10.275.10 4 199 3.1E-63 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Atu3933 3aa75a380cd926421fb4cfbb59dd52ce 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 141 157 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Atu4744 19b438c81c3cee007db86a832018c4ad 284 Gene3D G3DSA:3.40.50.2300 85 222 3.4E-83 T 14-10-2018 Atu4744 19b438c81c3cee007db86a832018c4ad 284 SUPERFAMILY SSF53822 1 278 4.48E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4744 19b438c81c3cee007db86a832018c4ad 284 Pfam PF13407 Periplasmic binding protein domain 1 242 1.2E-52 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4744 19b438c81c3cee007db86a832018c4ad 284 Gene3D G3DSA:3.40.50.2300 1 256 3.4E-83 T 14-10-2018 Atu4498 de2bdef12f10cfcba204a8637d1c0edc 349 Pfam PF03824 High-affinity nickel-transport protein 77 347 3.2E-93 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 Pfam PF03466 LysR substrate binding domain 97 251 1.3E-21 T 14-10-2018 IPR005119 LysR, substrate-binding Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 SUPERFAMILY SSF46785 10 114 1.2E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 SUPERFAMILY SSF53850 97 279 1.03E-22 T 14-10-2018 Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 73 1.9E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 Gene3D G3DSA:1.10.10.10 9 93 1.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 Gene3D G3DSA:3.40.190.10 104 271 8.4E-46 T 14-10-2018 Atu1765 3b951ce7bf8fc00a202d6122b831c04b 298 Gene3D G3DSA:3.40.190.10 173 266 8.4E-46 T 14-10-2018 Atu4110 2b7589891055985353d8537062c40611 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 179 0.0095 T 14-10-2018 Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 9.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 9.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 9.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 9.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 SUPERFAMILY SSF51735 3 229 9.31E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4110 2b7589891055985353d8537062c40611 249 Pfam PF00106 short chain dehydrogenase 4 186 1.7E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 Gene3D G3DSA:3.40.50.720 2 241 1.2E-62 T 14-10-2018 Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.6E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4110 2b7589891055985353d8537062c40611 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1494 dca20c32954e8dbd0efe7b5b13ed1a33 274 Gene3D G3DSA:3.60.15.10 5 271 2.2E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu1494 dca20c32954e8dbd0efe7b5b13ed1a33 274 SUPERFAMILY SSF56281 7 269 2.57E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu1494 dca20c32954e8dbd0efe7b5b13ed1a33 274 SMART SM00849 39 218 5.8E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu1494 dca20c32954e8dbd0efe7b5b13ed1a33 274 Pfam PF12706 Beta-lactamase superfamily domain 55 241 3.1E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 SUPERFAMILY SSF46689 19 96 7.18E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 80 1.5E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 SUPERFAMILY SSF48498 101 215 5.85E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 Gene3D G3DSA:1.10.357.10 76 216 5.1E-9 T 14-10-2018 Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 2.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 2.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu2549 9ab8d2c24f912baa6e98e85eada3eda0 219 Gene3D G3DSA:1.10.10.60 6 75 2.9E-16 T 14-10-2018 Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 Gene3D G3DSA:3.20.20.120 149 368 1.3E-178 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 SMART SM00922 165 261 1.7E-10 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 SUPERFAMILY SSF51604 135 382 7.36E-50 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 SUPERFAMILY SSF54826 44 148 1.93E-24 T 14-10-2018 Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 122 147 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 Pfam PF13378 Enolase C-terminal domain-like 171 380 5.1E-41 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 Gene3D G3DSA:3.30.390.10 8 379 1.3E-178 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu5458 5c31721cbc7f48dab0e5b55e655abc3c 388 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 51 147 6.4E-13 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 ProSitePatterns PS00012 Phosphopantetheine attachment site. 659 674 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 Gene3D G3DSA:1.10.1200.10 618 707 5.9E-18 T 14-10-2018 IPR036736 ACP-like superfamily Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 SUPERFAMILY SSF56801 16 595 4.97E-111 T 14-10-2018 Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 Gene3D G3DSA:3.30.300.30 477 604 1.3E-40 T 14-10-2018 Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 Pfam PF00550 Phosphopantetheine attachment site 634 700 5.1E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 SMART SM00823 Phosphopantetheine attachment site 632 704 2.2E-14 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 Gene3D G3DSA:3.40.50.12780 12 476 1.1E-137 T 14-10-2018 Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 Pfam PF00501 AMP-binding enzyme 26 483 7.3E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu3673 4f940272a86b0967cb11d72670a2e9e6 750 SUPERFAMILY SSF47336 631 718 2.62E-13 T 14-10-2018 IPR036736 ACP-like superfamily Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 SUPERFAMILY SSF51338 1 66 8.13E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 5 453 2.5E-181 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 Pfam PF01979 Amidohydrolase family 48 432 6.4E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 Gene3D G3DSA:3.20.20.140 52 422 3.3E-194 T 14-10-2018 Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 SUPERFAMILY SSF51338 348 457 2.27E-36 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 SUPERFAMILY SSF51556 52 381 3.4E-113 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2386 43bd87da1984ec2f23c9c38cbb874acf 485 Gene3D G3DSA:2.30.40.10 5 455 3.3E-194 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu1497 c89b239bbabec29a17b6f71a98aba00e 341 SUPERFAMILY SSF52540 20 235 2.19E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1497 c89b239bbabec29a17b6f71a98aba00e 341 Pfam PF13177 DNA polymerase III, delta subunit 23 195 9.6E-39 T 14-10-2018 Atu1497 c89b239bbabec29a17b6f71a98aba00e 341 Gene3D G3DSA:3.40.50.300 3 192 7.3E-43 T 14-10-2018 Atu2024 b30c0538a0054cde2193f0c96896178f 251 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 245 1.6E-78 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atu2024 b30c0538a0054cde2193f0c96896178f 251 Gene3D G3DSA:3.20.20.70 1 250 4.7E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2024 b30c0538a0054cde2193f0c96896178f 251 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 251 84.914 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atu2024 b30c0538a0054cde2193f0c96896178f 251 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 4 244 2.4E-58 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atu2024 b30c0538a0054cde2193f0c96896178f 251 SUPERFAMILY SSF63892 3 248 8.63E-77 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Atu0872 288c46eadd7af545412136d6dfdfb137 785 SUPERFAMILY SSF58104 450 730 9.42E-64 T 14-10-2018 Atu0872 288c46eadd7af545412136d6dfdfb137 785 SMART SM00283 482 729 4.8E-98 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0872 288c46eadd7af545412136d6dfdfb137 785 Gene3D G3DSA:1.10.287.950 429 731 4.7E-75 T 14-10-2018 Atu0872 288c46eadd7af545412136d6dfdfb137 785 SMART SM00304 347 400 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0872 288c46eadd7af545412136d6dfdfb137 785 SMART SM00304 429 481 53.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0872 288c46eadd7af545412136d6dfdfb137 785 Gene3D G3DSA:1.10.8.500 348 397 7.5E-16 T 14-10-2018 Atu0872 288c46eadd7af545412136d6dfdfb137 785 Pfam PF00672 HAMP domain 348 395 1.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Atu0872 288c46eadd7af545412136d6dfdfb137 785 SUPERFAMILY SSF158472 348 394 2.48E-9 T 14-10-2018 Atu0872 288c46eadd7af545412136d6dfdfb137 785 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 541 696 2.0E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Atu0872 288c46eadd7af545412136d6dfdfb137 785 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 638 3.9E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0872 288c46eadd7af545412136d6dfdfb137 785 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 3.9E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0872 288c46eadd7af545412136d6dfdfb137 785 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 580 607 3.9E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0872 288c46eadd7af545412136d6dfdfb137 785 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 657 686 3.9E-45 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Atu0408 3dcda6ae955f7ba6525560ddc364395c 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 280 1.5E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0408 3dcda6ae955f7ba6525560ddc364395c 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 360 553 4.3E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0408 3dcda6ae955f7ba6525560ddc364395c 558 SUPERFAMILY SSF161098 300 553 4.97E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu0408 3dcda6ae955f7ba6525560ddc364395c 558 Gene3D G3DSA:1.10.3720.10 302 558 4.8E-32 T 14-10-2018 IPR035906 MetI-like superfamily Atu0408 3dcda6ae955f7ba6525560ddc364395c 558 Gene3D G3DSA:1.10.3720.10 19 282 2.9E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu0408 3dcda6ae955f7ba6525560ddc364395c 558 SUPERFAMILY SSF161098 20 276 7.06E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu4493 891a28079eac6bed6fd30139a6e0132c 162 Pfam PF01928 CYTH domain 3 136 6.3E-15 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Atu4493 891a28079eac6bed6fd30139a6e0132c 162 Gene3D G3DSA:2.40.320.10 1 153 1.4E-46 T 14-10-2018 Atu4493 891a28079eac6bed6fd30139a6e0132c 162 SMART SM01118 2 149 7.1E-20 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Atu4493 891a28079eac6bed6fd30139a6e0132c 162 PIRSF PIRSF016487 1 159 1.5E-65 T 14-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like Atu4493 891a28079eac6bed6fd30139a6e0132c 162 SUPERFAMILY SSF55154 1 149 1.49E-39 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Atu2514 729fb5540987ae767c3ebfc4b1aff0b3 246 Gene3D G3DSA:3.40.50.300 1 245 1.3E-70 T 14-10-2018 Atu2514 729fb5540987ae767c3ebfc4b1aff0b3 246 SUPERFAMILY SSF52540 2 224 3.07E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2514 729fb5540987ae767c3ebfc4b1aff0b3 246 SMART SM00382 26 212 6.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2514 729fb5540987ae767c3ebfc4b1aff0b3 246 Pfam PF00005 ABC transporter 18 163 9.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2514 729fb5540987ae767c3ebfc4b1aff0b3 246 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 Pfam PF07729 FCD domain 94 220 1.2E-25 T 14-10-2018 IPR011711 GntR, C-terminal Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 2.9E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 SUPERFAMILY SSF46785 6 77 1.2E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 SUPERFAMILY SSF48008 92 227 8.89E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 SMART SM00345 14 73 1.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 Gene3D G3DSA:1.20.120.530 93 234 3.3E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 Gene3D G3DSA:1.10.10.10 7 75 3.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3252 f4627510b00a8efe9c46be203aa9b25e 238 SMART SM00895 94 221 4.0E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu3440 a79308f8aed6d71e142bceb44d77b681 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 27 84 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3440 a79308f8aed6d71e142bceb44d77b681 323 SUPERFAMILY SSF46785 22 97 2.13E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3440 a79308f8aed6d71e142bceb44d77b681 323 Pfam PF03466 LysR substrate binding domain 109 315 2.2E-25 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3440 a79308f8aed6d71e142bceb44d77b681 323 Gene3D G3DSA:3.40.190.10 182 285 2.6E-35 T 14-10-2018 Atu3440 a79308f8aed6d71e142bceb44d77b681 323 Gene3D G3DSA:1.10.10.10 25 115 7.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3440 a79308f8aed6d71e142bceb44d77b681 323 Gene3D G3DSA:3.40.190.10 122 309 2.6E-35 T 14-10-2018 Atu3440 a79308f8aed6d71e142bceb44d77b681 323 SUPERFAMILY SSF53850 109 319 2.17E-27 T 14-10-2018 Atu3440 a79308f8aed6d71e142bceb44d77b681 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3440 a79308f8aed6d71e142bceb44d77b681 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3440 a79308f8aed6d71e142bceb44d77b681 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu1500 a69109b8587e55a7deccb4e1a6414522 347 SUPERFAMILY SSF50685 77 167 1.15E-7 T 14-10-2018 IPR036908 RlpA-like domain superfamily Atu1500 a69109b8587e55a7deccb4e1a6414522 347 Gene3D G3DSA:2.40.40.10 81 174 7.4E-33 T 14-10-2018 IPR036908 RlpA-like domain superfamily Atu1500 a69109b8587e55a7deccb4e1a6414522 347 Pfam PF03330 Lytic transglycolase 83 171 5.3E-20 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Atu1500 a69109b8587e55a7deccb4e1a6414522 347 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 84 172 1.6E-36 T 14-10-2018 IPR012997 Rare lipoprotein A Atu1500 a69109b8587e55a7deccb4e1a6414522 347 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 174 23.3 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Atu0395 71bdd9755fd6dee7bf75536645dd7083 266 SUPERFAMILY SSF56300 1 241 4.34E-43 T 14-10-2018 Atu0395 71bdd9755fd6dee7bf75536645dd7083 266 Gene3D G3DSA:3.60.21.10 1 243 7.5E-60 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu0395 71bdd9755fd6dee7bf75536645dd7083 266 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 1.2E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu5201 3245513c71f9fdb884c56c85457e4b4e 284 Pfam PF02678 Pirin 47 115 1.4E-15 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Atu5201 3245513c71f9fdb884c56c85457e4b4e 284 Pfam PF05726 Pirin C-terminal cupin domain 169 275 5.5E-23 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Atu5201 3245513c71f9fdb884c56c85457e4b4e 284 SUPERFAMILY SSF51182 12 277 4.89E-53 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu5201 3245513c71f9fdb884c56c85457e4b4e 284 Gene3D G3DSA:2.60.120.10 34 271 1.8E-54 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu5201 3245513c71f9fdb884c56c85457e4b4e 284 Gene3D G3DSA:2.60.120.10 137 245 1.8E-54 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu5201 3245513c71f9fdb884c56c85457e4b4e 284 PIRSF PIRSF006232 3 283 7.1E-60 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 Gene3D G3DSA:3.40.50.1000 10 214 2.5E-58 T 14-10-2018 IPR023214 HAD superfamily Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 SUPERFAMILY SSF56784 9 221 1.24E-59 T 14-10-2018 IPR036412 HAD-like superfamily Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 193 2.0E-37 T 14-10-2018 Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 186 1.9E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 222 38.071 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 193 7.9E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 Gene3D G3DSA:1.10.150.240 22 92 2.5E-58 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu1614 7c0da28ffbd6d1e2ac65dbb868d82c77 233 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 221 2.5E-53 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 326 1.4E-126 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 5 328 47.369 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 PIRSF PIRSF006621 1 331 6.4E-71 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 Gene3D G3DSA:3.20.20.70 9 251 2.8E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 Pfam PF01207 Dihydrouridine synthase (Dus) 15 314 3.5E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 SUPERFAMILY SSF51395 13 324 7.85E-75 T 14-10-2018 Atu1515 da7b86f51dad327b547000a68c9cc9fb 336 Gene3D G3DSA:1.20.120.1460 261 327 1.4E-14 T 14-10-2018 Atu0269 4f62e5a1f8522f4cf7405606ef4aa8c4 532 Pfam PF13742 OB-fold nucleic acid binding domain 16 109 6.2E-28 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Atu0269 4f62e5a1f8522f4cf7405606ef4aa8c4 532 Pfam PF02601 Exonuclease VII, large subunit 133 497 3.1E-92 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Atu0269 4f62e5a1f8522f4cf7405606ef4aa8c4 532 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 500 27.214 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Atu0269 4f62e5a1f8522f4cf7405606ef4aa8c4 532 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 358 2.8E-118 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Atu2147 94b098b60f4ae0dd4691263f3a60ae92 368 Pfam PF13343 Bacterial extracellular solute-binding protein 96 313 8.4E-36 T 14-10-2018 Atu2147 94b098b60f4ae0dd4691263f3a60ae92 368 Gene3D G3DSA:3.40.190.10 147 269 1.6E-39 T 14-10-2018 Atu2147 94b098b60f4ae0dd4691263f3a60ae92 368 Gene3D G3DSA:3.40.190.10 55 319 1.6E-39 T 14-10-2018 Atu2147 94b098b60f4ae0dd4691263f3a60ae92 368 SUPERFAMILY SSF53850 43 361 5.93E-52 T 14-10-2018 Atu3448 fc3b7fd83de01ff97ec9c02e4928e8a0 350 Gene3D G3DSA:3.40.190.10 14 340 2.7E-114 T 14-10-2018 Atu3448 fc3b7fd83de01ff97ec9c02e4928e8a0 350 Pfam PF09084 NMT1/THI5 like 80 151 1.0E-4 T 14-10-2018 IPR015168 SsuA/THI5-like Atu3448 fc3b7fd83de01ff97ec9c02e4928e8a0 350 SUPERFAMILY SSF53850 15 336 1.99E-20 T 14-10-2018 Atu3448 fc3b7fd83de01ff97ec9c02e4928e8a0 350 Gene3D G3DSA:3.40.190.270 97 243 2.7E-114 T 14-10-2018 Atu5299 a4fcb850a83a1151a82ff278dc61bab5 364 PIRSF PIRSF031854 1 348 1.8E-174 T 14-10-2018 IPR022550 Nucleotidyltransferase 8 Atu5299 a4fcb850a83a1151a82ff278dc61bab5 364 Pfam PF12281 Nucleotidyltransferase 105 319 7.7E-79 T 14-10-2018 IPR022550 Nucleotidyltransferase 8 Atu0728 8c9b653a7bbabb9dd9d29f2c728e38f4 153 Pfam PF07886 BA14K-like protein 119 147 4.2E-15 T 14-10-2018 IPR012413 BA14k family GO:0009405 Atu4573 d2874abac543923adee933d14c94f46a 261 Gene3D G3DSA:3.40.190.80 147 259 8.3E-9 T 14-10-2018 Atu4573 d2874abac543923adee933d14c94f46a 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 78 91 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Atu4573 d2874abac543923adee933d14c94f46a 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 164 185 1.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4573 d2874abac543923adee933d14c94f46a 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4573 d2874abac543923adee933d14c94f46a 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 202 226 1.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4573 d2874abac543923adee933d14c94f46a 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 1.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4573 d2874abac543923adee933d14c94f46a 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.1E-19 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4573 d2874abac543923adee933d14c94f46a 261 Pfam PF00459 Inositol monophosphatase family 3 219 5.3E-41 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu4573 d2874abac543923adee933d14c94f46a 261 SUPERFAMILY SSF56655 1 222 8.77E-52 T 14-10-2018 Atu4573 d2874abac543923adee933d14c94f46a 261 Gene3D G3DSA:3.30.540.10 1 136 1.9E-37 T 14-10-2018 Atu4235 0cc6d40665272e92185887f536f1b698 243 SUPERFAMILY SSF52540 1 236 9.89E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4235 0cc6d40665272e92185887f536f1b698 243 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4235 0cc6d40665272e92185887f536f1b698 243 PIRSF PIRSF039085 1 242 1.9E-103 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu4235 0cc6d40665272e92185887f536f1b698 243 SMART SM00382 27 214 3.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4235 0cc6d40665272e92185887f536f1b698 243 Pfam PF00005 ABC transporter 18 166 6.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4235 0cc6d40665272e92185887f536f1b698 243 Gene3D G3DSA:3.40.50.300 1 242 1.0E-75 T 14-10-2018 Atu1759 4c34379c965ae222d0e5a9135c65c0b1 467 SUPERFAMILY SSF143548 17 163 5.75E-42 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Atu1759 4c34379c965ae222d0e5a9135c65c0b1 467 Pfam PF03313 Serine dehydratase alpha chain 197 461 5.0E-101 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Atu1759 4c34379c965ae222d0e5a9135c65c0b1 467 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 464 1.6E-186 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Atu1759 4c34379c965ae222d0e5a9135c65c0b1 467 Gene3D G3DSA:3.30.1330.90 11 165 2.2E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Atu1759 4c34379c965ae222d0e5a9135c65c0b1 467 Pfam PF03315 Serine dehydratase beta chain 4 161 3.4E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Atu6092 be07a28089eedb39e0d42a8775270295 472 Gene3D G3DSA:1.10.150.20 144 193 1.4E-11 T 14-10-2018 Atu6092 be07a28089eedb39e0d42a8775270295 472 Gene3D G3DSA:2.30.40.20 8 43 1.4E-11 T 14-10-2018 Atu6092 be07a28089eedb39e0d42a8775270295 472 Gene3D G3DSA:3.30.70.270 44 143 1.4E-11 T 14-10-2018 Atu6092 be07a28089eedb39e0d42a8775270295 472 SUPERFAMILY SSF56672 4 203 8.45E-37 T 14-10-2018 Atu6092 be07a28089eedb39e0d42a8775270295 472 Pfam PF00817 impB/mucB/samB family 7 117 5.3E-6 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 SUPERFAMILY SSF50891 7 164 3.65E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 Gene3D G3DSA:2.40.100.10 1 167 9.0E-47 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 PIRSF PIRSF001467 5 168 1.2E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 130 145 1.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 62 1.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 129 1.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 1.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 163 2.7E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1679 7996b2b8e400d37e7c9c7d004446a9a9 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 45 62 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Atu5131 ce69499c2cd1b62a007554b8ec391eca 264 Gene3D G3DSA:3.40.50.300 45 264 2.4E-59 T 14-10-2018 Atu5131 ce69499c2cd1b62a007554b8ec391eca 264 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5131 ce69499c2cd1b62a007554b8ec391eca 264 Pfam PF00005 ABC transporter 67 212 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5131 ce69499c2cd1b62a007554b8ec391eca 264 SMART SM00382 76 261 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5131 ce69499c2cd1b62a007554b8ec391eca 264 SUPERFAMILY SSF52540 47 262 1.64E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 9.6E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 9.6E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 9.6E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 9.6E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 9.6E-51 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 Gene3D G3DSA:3.30.572.10 1 264 1.4E-133 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.5E-96 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.8E-42 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.257 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 SUPERFAMILY SSF55831 1 264 2.36E-131 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu2047 9b005237da5fd740ffd09f85b2f960a5 264 Pfam PF00303 Thymidylate synthase 2 264 8.7E-126 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Atu1712 3a5634294df000479eee28dc4f5d69d3 405 SUPERFAMILY SSF109604 26 401 1.38E-87 T 14-10-2018 Atu1712 3a5634294df000479eee28dc4f5d69d3 405 Pfam PF13286 Phosphohydrolase-associated domain 306 396 1.9E-24 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain Atu1712 3a5634294df000479eee28dc4f5d69d3 405 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 37 398 7.1E-98 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Atu1712 3a5634294df000479eee28dc4f5d69d3 405 SMART SM00471 71 228 1.8E-10 T 14-10-2018 IPR003607 HD/PDEase domain Atu1712 3a5634294df000479eee28dc4f5d69d3 405 Gene3D G3DSA:1.10.3210.10 10 399 2.8E-124 T 14-10-2018 Atu1712 3a5634294df000479eee28dc4f5d69d3 405 Pfam PF01966 HD domain 75 218 7.0E-15 T 14-10-2018 IPR006674 HD domain Atu1712 3a5634294df000479eee28dc4f5d69d3 405 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 15 398 39.387 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Atu3079 bad8bddc9a556bea1d5dfb056fdaa4c3 405 PIRSF PIRSF004810 2 405 2.6E-128 T 14-10-2018 IPR014047 Chromate transporter, long chain Atu3079 bad8bddc9a556bea1d5dfb056fdaa4c3 405 Pfam PF02417 Chromate transporter 18 182 7.7E-32 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Atu3079 bad8bddc9a556bea1d5dfb056fdaa4c3 405 Pfam PF02417 Chromate transporter 233 399 2.9E-37 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Atu3079 bad8bddc9a556bea1d5dfb056fdaa4c3 405 TIGRFAM TIGR00937 2A51: chromate efflux transporter 23 399 1.1E-101 T 14-10-2018 IPR014047 Chromate transporter, long chain Atu0576 315b2aac5e0633849fc7a7020d91b4f7 367 Pfam PF00700 Bacterial flagellin C-terminal helical region 285 367 1.8E-25 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0576 315b2aac5e0633849fc7a7020d91b4f7 367 SUPERFAMILY SSF64518 5 367 2.09E-24 T 14-10-2018 Atu0576 315b2aac5e0633849fc7a7020d91b4f7 367 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 2.0E-34 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0576 315b2aac5e0633849fc7a7020d91b4f7 367 Gene3D G3DSA:1.20.1330.10 47 189 2.2E-11 T 14-10-2018 Atu4029 95ceec21623fb3c919666bc5da9d92cf 306 SUPERFAMILY SSF63829 9 304 4.14E-66 T 14-10-2018 Atu4029 95ceec21623fb3c919666bc5da9d92cf 306 Gene3D G3DSA:2.120.10.30 2 299 5.6E-113 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu4029 95ceec21623fb3c919666bc5da9d92cf 306 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 35 290 4.3E-60 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Atu4029 95ceec21623fb3c919666bc5da9d92cf 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 36 53 2.2E-7 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4029 95ceec21623fb3c919666bc5da9d92cf 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 166 188 2.2E-7 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4029 95ceec21623fb3c919666bc5da9d92cf 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 233 250 2.2E-7 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 Pfam PF00005 ABC transporter 28 194 1.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 SMART SM00382 347 543 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 SMART SM00382 36 244 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 278 4.0E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 545 579 4.6E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 SUPERFAMILY SSF52540 7 265 1.43E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 SUPERFAMILY SSF52540 309 565 7.93E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 Pfam PF00005 ABC transporter 339 493 7.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 Gene3D G3DSA:3.40.50.300 307 606 1.1E-80 T 14-10-2018 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 Gene3D G3DSA:3.40.50.300 5 305 9.8E-78 T 14-10-2018 Atu2586 bf034b4e9a752fc42dc042e78aa6d838 630 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2236 430e9a5b46c8365ab04b3bba31193efc 180 SUPERFAMILY SSF53271 7 177 7.6E-56 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu2236 430e9a5b46c8365ab04b3bba31193efc 180 Gene3D G3DSA:3.40.50.2020 3 180 3.4E-68 T 14-10-2018 Atu2236 430e9a5b46c8365ab04b3bba31193efc 180 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 38.247 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Atu2236 430e9a5b46c8365ab04b3bba31193efc 180 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 8 176 2.7E-68 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Atu2236 430e9a5b46c8365ab04b3bba31193efc 180 Pfam PF00156 Phosphoribosyl transferase domain 35 166 7.6E-17 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu2077 618bb1f65ab59d0a8726fe6e0beac807 202 Gene3D G3DSA:3.30.420.10 2 163 2.7E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu2077 618bb1f65ab59d0a8726fe6e0beac807 202 SUPERFAMILY SSF53098 3 159 3.94E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu2077 618bb1f65ab59d0a8726fe6e0beac807 202 Pfam PF00929 Exonuclease 4 155 2.7E-16 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu2077 618bb1f65ab59d0a8726fe6e0beac807 202 SMART SM00479 2 166 4.5E-18 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 Gene3D G3DSA:3.30.413.10 320 443 1.4E-14 T 14-10-2018 Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 23 86 2.5E-8 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 SUPERFAMILY SSF56014 100 178 1.23E-6 T 14-10-2018 Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 SUPERFAMILY SSF55124 236 316 3.93E-5 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 SUPERFAMILY SSF55124 13 90 1.23E-13 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 Gene3D G3DSA:3.30.413.10 96 204 2.0E-5 T 14-10-2018 Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 13 387 6.2E-86 T 14-10-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like Atu2803 b0c7dc3be59452d1fc1323aa64541bdf 451 SUPERFAMILY SSF56014 319 441 1.44E-14 T 14-10-2018 Atu0922 39129834efff8c243f06cf461cbdbe2d 118 Pfam PF07372 Protein of unknown function (DUF1491) 3 110 2.5E-29 T 14-10-2018 IPR009964 Protein of unknown function DUF1491 Atu0922 39129834efff8c243f06cf461cbdbe2d 118 Gene3D G3DSA:3.40.1530.20 1 118 3.5E-51 T 14-10-2018 Atu0361 4896ab91104fdc8b99a593b51a97a30a 139 Pfam PF01381 Helix-turn-helix 19 72 4.0E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0361 4896ab91104fdc8b99a593b51a97a30a 139 SMART SM00530 18 73 1.0E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0361 4896ab91104fdc8b99a593b51a97a30a 139 Gene3D G3DSA:1.10.260.40 1 78 6.5E-16 T 14-10-2018 Atu0361 4896ab91104fdc8b99a593b51a97a30a 139 SUPERFAMILY SSF47413 5 84 2.18E-29 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3716 e08f3144051aef64b54610fd5a9bce45 152 Gene3D G3DSA:3.30.420.270 75 144 1.6E-18 T 14-10-2018 Atu3716 e08f3144051aef64b54610fd5a9bce45 152 TIGRFAM TIGR02801 tolR: protein TolR 27 147 1.8E-39 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Atu3716 e08f3144051aef64b54610fd5a9bce45 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 27 148 4.2E-30 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atu4721 b99de6c9d78c097a3fce5db21f49cee1 268 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 28 1.3E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu4721 b99de6c9d78c097a3fce5db21f49cee1 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 266 6.3E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4721 b99de6c9d78c097a3fce5db21f49cee1 268 SUPERFAMILY SSF161098 62 249 1.96E-31 T 14-10-2018 IPR035906 MetI-like superfamily Atu4721 b99de6c9d78c097a3fce5db21f49cee1 268 Gene3D G3DSA:1.10.3720.10 57 264 4.7E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu2128 3727780e3cb81904d1702f6fffda12ce 550 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 3.2E-53 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 SUPERFAMILY SSF52518 366 540 1.23E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu2128 3727780e3cb81904d1702f6fffda12ce 550 SUPERFAMILY SSF52518 1 182 4.98E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu2128 3727780e3cb81904d1702f6fffda12ce 550 Gene3D G3DSA:3.40.50.970 1 177 6.7E-61 T 14-10-2018 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 Gene3D G3DSA:3.40.50.1220 185 356 2.2E-31 T 14-10-2018 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 Gene3D G3DSA:3.40.50.970 357 550 2.3E-56 T 14-10-2018 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 530 1.5E-44 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 190 324 4.2E-25 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Atu2128 3727780e3cb81904d1702f6fffda12ce 550 SUPERFAMILY SSF52467 154 353 7.36E-35 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Atu8171 11ad88ea7395fbda30ed134faf9f6882 168 Gene3D G3DSA:2.30.30.220 1 120 1.2E-49 T 14-10-2018 IPR036760 SspB-like superfamily Atu8171 11ad88ea7395fbda30ed134faf9f6882 168 Pfam PF04386 Stringent starvation protein B 11 154 2.2E-50 T 14-10-2018 IPR007481 Stringent starvation protein B Atu8171 11ad88ea7395fbda30ed134faf9f6882 168 SUPERFAMILY SSF101738 4 118 1.61E-46 T 14-10-2018 IPR036760 SspB-like superfamily Atu5213 08aff4dc90e1de54050839ad3e1624a7 333 Gene3D G3DSA:3.40.50.720 125 300 8.4E-66 T 14-10-2018 Atu5213 08aff4dc90e1de54050839ad3e1624a7 333 SMART SM00829 10 330 6.1E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu5213 08aff4dc90e1de54050839ad3e1624a7 333 Gene3D G3DSA:3.90.180.10 3 316 8.4E-66 T 14-10-2018 Atu5213 08aff4dc90e1de54050839ad3e1624a7 333 SUPERFAMILY SSF50129 1 138 5.19E-23 T 14-10-2018 IPR011032 GroES-like superfamily Atu5213 08aff4dc90e1de54050839ad3e1624a7 333 Pfam PF00107 Zinc-binding dehydrogenase 164 274 6.2E-8 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu5213 08aff4dc90e1de54050839ad3e1624a7 333 SUPERFAMILY SSF51735 117 277 3.06E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 SMART SM01133 12 243 1.0E-71 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 Pfam PF01791 DeoC/LacD family aldolase 18 210 2.0E-33 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 Gene3D G3DSA:3.20.20.70 5 257 4.5E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 SUPERFAMILY SSF51569 14 244 8.27E-75 T 14-10-2018 Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 3 257 51.143 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 PIRSF PIRSF001357 7 250 6.4E-72 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu0132 344a9a016febef7c0bcf2c8fca2847b7 257 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 14 226 5.1E-65 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 2.0E-15 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 2.0E-15 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 2.0E-15 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 2.0E-15 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 2.0E-15 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 Pfam PF02110 Hydroxyethylthiazole kinase family 15 133 1.3E-28 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 Pfam PF02110 Hydroxyethylthiazole kinase family 140 232 8.2E-22 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PIRSF PIRSF000513 136 244 8.4E-36 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 PIRSF PIRSF000513 9 139 1.8E-48 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3288 253b03f71de9863a156e1c1c7aedce61 246 Gene3D G3DSA:3.40.1190.20 140 244 4.8E-30 T 14-10-2018 IPR029056 Ribokinase-like Atu3288 253b03f71de9863a156e1c1c7aedce61 246 Gene3D G3DSA:3.40.1190.20 3 139 6.2E-38 T 14-10-2018 IPR029056 Ribokinase-like Atu3288 253b03f71de9863a156e1c1c7aedce61 246 SUPERFAMILY SSF53613 13 242 4.26E-47 T 14-10-2018 IPR029056 Ribokinase-like Atu1121 a610fff2a54f8513cb6b90d1873dcba4 231 Gene3D G3DSA:3.40.30.10 2 89 1.9E-12 T 14-10-2018 Atu1121 a610fff2a54f8513cb6b90d1873dcba4 231 Gene3D G3DSA:1.20.1050.10 92 221 3.9E-21 T 14-10-2018 Atu1121 a610fff2a54f8513cb6b90d1873dcba4 231 Pfam PF13417 Glutathione S-transferase, N-terminal domain 16 86 9.7E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu1121 a610fff2a54f8513cb6b90d1873dcba4 231 Pfam PF13410 Glutathione S-transferase, C-terminal domain 156 215 1.9E-6 T 14-10-2018 Atu1121 a610fff2a54f8513cb6b90d1873dcba4 231 SUPERFAMILY SSF52833 16 110 4.01E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1121 a610fff2a54f8513cb6b90d1873dcba4 231 SUPERFAMILY SSF47616 95 219 8.35E-9 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu2083 32ab13b7094042c16073fd7a437c6b96 557 PIRSF PIRSF003128 1 557 1.0E-158 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Atu2083 32ab13b7094042c16073fd7a437c6b96 557 SUPERFAMILY SSF52540 2 504 1.51E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2083 32ab13b7094042c16073fd7a437c6b96 557 SUPERFAMILY SSF52540 1 216 3.72E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2083 32ab13b7094042c16073fd7a437c6b96 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 503 2.1E-14 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Atu2083 32ab13b7094042c16073fd7a437c6b96 557 Gene3D G3DSA:3.40.50.300 247 555 8.7E-50 T 14-10-2018 Atu2083 32ab13b7094042c16073fd7a437c6b96 557 Gene3D G3DSA:3.40.50.300 1 246 1.3E-40 T 14-10-2018 Atu2083 32ab13b7094042c16073fd7a437c6b96 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 1.7E-145 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 Gene3D G3DSA:3.40.50.11030 212 324 7.8E-16 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 207 9.6E-50 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 PIRSF PIRSF004930 1 325 1.2E-100 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 Pfam PF01300 Telomere recombination 22 197 2.7E-52 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 Pfam PF03481 Putative GTP-binding controlling metal-binding 201 322 1.9E-20 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 Gene3D G3DSA:3.90.870.10 2 211 7.7E-70 T 14-10-2018 Atu0724 21e9d9ee3246de05cf7a8ae0c8516f75 325 SUPERFAMILY SSF55821 5 207 2.9E-57 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Atu5289 d7e6dd1d5e13175243d78b8662d133b5 207 Gene3D G3DSA:1.10.357.10 12 201 2.4E-41 T 14-10-2018 Atu5289 d7e6dd1d5e13175243d78b8662d133b5 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Atu5289 d7e6dd1d5e13175243d78b8662d133b5 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 71 7.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5289 d7e6dd1d5e13175243d78b8662d133b5 207 SUPERFAMILY SSF46689 14 87 2.72E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5289 d7e6dd1d5e13175243d78b8662d133b5 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 4.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5289 d7e6dd1d5e13175243d78b8662d133b5 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 4.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu3519 13713ffb0a0ec95cfbc9af1477edc9c6 288 Gene3D G3DSA:3.10.50.40 132 227 6.3E-36 T 14-10-2018 Atu3519 13713ffb0a0ec95cfbc9af1477edc9c6 288 SUPERFAMILY SSF109998 27 165 1.8E-16 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atu3519 13713ffb0a0ec95cfbc9af1477edc9c6 288 Pfam PF13616 PPIC-type PPIASE domain 134 227 3.3E-24 T 14-10-2018 Atu3519 13713ffb0a0ec95cfbc9af1477edc9c6 288 SUPERFAMILY SSF54534 136 225 3.37E-32 T 14-10-2018 Atu0161 6877a9ca0394c99ba593c4fa7d2f2808 340 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 106 318 1.1E-107 T 14-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 Atu0161 6877a9ca0394c99ba593c4fa7d2f2808 340 Pfam PF01618 MotA/TolQ/ExbB proton channel family 192 301 1.0E-34 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atu3020 aaf19219a920dc77dda55a179f5b48de 236 Gene3D G3DSA:1.10.10.10 1 64 4.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3020 aaf19219a920dc77dda55a179f5b48de 236 SMART SM00345 5 63 3.8E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3020 aaf19219a920dc77dda55a179f5b48de 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 63 1.4E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3020 aaf19219a920dc77dda55a179f5b48de 236 Gene3D G3DSA:1.20.120.530 69 201 1.5E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3020 aaf19219a920dc77dda55a179f5b48de 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 53 6.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3020 aaf19219a920dc77dda55a179f5b48de 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 23 37 6.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3020 aaf19219a920dc77dda55a179f5b48de 236 Pfam PF07729 FCD domain 77 196 4.8E-22 T 14-10-2018 IPR011711 GntR, C-terminal Atu3020 aaf19219a920dc77dda55a179f5b48de 236 SMART SM00895 73 198 5.6E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu3020 aaf19219a920dc77dda55a179f5b48de 236 SUPERFAMILY SSF46785 4 67 1.6E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3020 aaf19219a920dc77dda55a179f5b48de 236 SUPERFAMILY SSF48008 70 200 6.02E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu4233 40b1722dfecf7d941e94dbfd4b61e5e3 286 Gene3D G3DSA:3.40.190.10 137 236 2.7E-40 T 14-10-2018 Atu4233 40b1722dfecf7d941e94dbfd4b61e5e3 286 Gene3D G3DSA:3.40.190.10 49 266 2.7E-40 T 14-10-2018 Atu4233 40b1722dfecf7d941e94dbfd4b61e5e3 286 SUPERFAMILY SSF53850 47 271 2.04E-39 T 14-10-2018 Atu4233 40b1722dfecf7d941e94dbfd4b61e5e3 286 SMART SM00062 50 274 2.5E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4233 40b1722dfecf7d941e94dbfd4b61e5e3 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 270 2.4E-39 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4228 e7c2d0ec485cbe581d34943b6726d6ca 228 PIRSF PIRSF006519 1 228 2.5E-85 T 14-10-2018 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein Atu4228 e7c2d0ec485cbe581d34943b6726d6ca 228 Gene3D G3DSA:2.160.20.60 29 213 1.1E-14 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atu4228 e7c2d0ec485cbe581d34943b6726d6ca 228 Pfam PF01493 GXGXG motif 42 183 5.1E-11 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Atu4228 e7c2d0ec485cbe581d34943b6726d6ca 228 SUPERFAMILY SSF69336 5 197 2.22E-43 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.781 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 404 2.2E-139 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 SUPERFAMILY SSF143856 119 235 9.55E-46 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 Gene3D G3DSA:3.30.70.1250 117 238 1.1E-148 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 PIRSF PIRSF001491 1 406 6.5E-158 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 Gene3D G3DSA:3.40.720.10 3 406 1.1E-148 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 SUPERFAMILY SSF53649 3 406 2.33E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atu0137 d09a657b4ed5b21abceb8fffef350a6b 406 Pfam PF01676 Metalloenzyme superfamily 3 397 6.8E-38 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Atu6003 50a3f04f1bb08a30154273e1305ff306 243 Pfam PF02027 RolB/RolC glucosidase family 18 218 1.6E-56 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu0223 131d17d8b1f7f6b9214e9971da248b0a 170 Pfam PF01478 Type IV leader peptidase family 9 107 7.2E-15 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 Gene3D G3DSA:3.40.50.300 3 222 4.0E-68 T 14-10-2018 Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 Pfam PF00005 ABC transporter 19 161 4.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 SUPERFAMILY SSF52540 4 242 2.66E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 SMART SM00382 28 211 6.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 SUPERFAMILY SSF50331 236 358 5.59E-25 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 Gene3D G3DSA:2.40.50.940 223 351 2.4E-27 T 14-10-2018 Atu4559 a95239b1f1c37b56b684c728dd3a5108 367 Gene3D G3DSA:2.40.50.140 288 342 2.4E-27 T 14-10-2018 Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 Gene3D G3DSA:3.40.47.10 1 262 8.8E-89 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 375 2.0E-34 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 416 2.0E-187 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 SUPERFAMILY SSF53901 1 261 9.56E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 SMART SM00825 Beta-ketoacyl synthase 4 420 1.1E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 PIRSF PIRSF000447 1 420 6.6E-197 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 254 4.3E-59 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 Gene3D G3DSA:3.40.47.10 268 420 4.0E-53 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu1097 f73f9f17cabec767aa2e6723d03efc09 420 SUPERFAMILY SSF53901 221 418 9.29E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu0195 e156fb4edc23aea6afb053d10b48b1ae 163 Gene3D G3DSA:3.40.50.300 1 162 3.6E-64 T 14-10-2018 Atu0195 e156fb4edc23aea6afb053d10b48b1ae 163 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 1 155 8.8E-58 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 Atu0195 e156fb4edc23aea6afb053d10b48b1ae 163 Pfam PF01202 Shikimate kinase 5 118 4.2E-10 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atu0195 e156fb4edc23aea6afb053d10b48b1ae 163 SUPERFAMILY SSF52540 1 156 3.02E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2669 9b846c3dd68cc09a2f418df5e074f1b7 215 PIRSF PIRSF006324 4 214 9.5E-52 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu2669 9b846c3dd68cc09a2f418df5e074f1b7 215 Pfam PF01810 LysE type translocator 19 210 9.1E-34 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 SUPERFAMILY SSF46785 1 110 2.15E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 Gene3D G3DSA:3.40.190.10 162 261 5.8E-49 T 14-10-2018 Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 Gene3D G3DSA:1.10.10.10 1 88 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 Pfam PF03466 LysR substrate binding domain 87 290 1.3E-38 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 SUPERFAMILY SSF53850 89 294 2.9E-40 T 14-10-2018 Atu5392 3d66e5653ab4a3a96656cc3c63b18765 301 Gene3D G3DSA:3.40.190.10 91 286 5.8E-49 T 14-10-2018 Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 SUPERFAMILY SSF53955 38 338 7.59E-85 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 Gene3D G3DSA:1.10.101.10 340 408 3.9E-8 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 SUPERFAMILY SSF47090 340 408 6.28E-15 T 14-10-2018 IPR036365 PGBD-like superfamily Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 45 337 1.2E-98 T 14-10-2018 IPR011970 Lytic murein transglycosylase Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 Gene3D G3DSA:1.10.8.350 57 219 1.8E-60 T 14-10-2018 Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 Pfam PF01471 Putative peptidoglycan binding domain 355 408 6.3E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 Pfam PF13406 Transglycosylase SLT domain 47 333 7.5E-82 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 Atu2122 f4c9e6ce45b3d56803f1df4da377d0bf 408 Gene3D G3DSA:1.10.530.10 86 333 1.8E-60 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 Gene3D G3DSA:2.40.50.230 372 472 3.4E-38 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 Gene3D G3DSA:2.30.110.50 21 350 2.3E-78 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 SUPERFAMILY SSF69349 458 571 8.63E-30 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 Pfam PF05954 Phage late control gene D protein (GPD) 36 347 6.6E-74 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 Gene3D G3DSA:3.55.50.10 112 204 2.3E-78 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 SUPERFAMILY SSF69279 220 380 1.7E-25 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 30 519 4.7E-111 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 SUPERFAMILY SSF69255 380 468 1.96E-30 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 SUPERFAMILY SSF69279 18 200 4.68E-43 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 536 3.0E-170 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 SUPERFAMILY SSF69349 667 790 1.26E-7 T 14-10-2018 Atu4348 f9b0dbb3114e8aebef181e7971f22eb6 816 Gene3D G3DSA:3.30.1920.30 240 303 2.3E-78 T 14-10-2018 Atu5194 3d891f1debb0c8f9ff11aacba90877a1 249 Pfam PF00376 MerR family regulatory protein 4 39 5.6E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu5194 3d891f1debb0c8f9ff11aacba90877a1 249 SUPERFAMILY SSF46955 1 104 1.36E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu5194 3d891f1debb0c8f9ff11aacba90877a1 249 SMART SM00422 1 70 1.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu5194 3d891f1debb0c8f9ff11aacba90877a1 249 Gene3D G3DSA:1.10.1660.10 2 198 8.5E-27 T 14-10-2018 Atu5194 3d891f1debb0c8f9ff11aacba90877a1 249 Pfam PF09278 MerR, DNA binding 46 104 3.5E-6 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding Atu5027 a8fb68b6d3fa48511d58ae8e61775bd7 184 Pfam PF13276 HTH-like domain 34 86 8.0E-12 T 14-10-2018 IPR025948 HTH-like domain Atu0634 f6514d055fcc80886eddb33cc1d61bd4 338 Gene3D G3DSA:1.10.600.10 9 338 7.0E-108 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atu0634 f6514d055fcc80886eddb33cc1d61bd4 338 Pfam PF00348 Polyprenyl synthetase 45 288 1.0E-70 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Atu0634 f6514d055fcc80886eddb33cc1d61bd4 338 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 217 229 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Atu0634 f6514d055fcc80886eddb33cc1d61bd4 338 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 95 109 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Atu0634 f6514d055fcc80886eddb33cc1d61bd4 338 SUPERFAMILY SSF48576 14 336 1.1E-94 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 27 386 4.1E-99 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 Pfam PF07687 Peptidase dimerisation domain 198 291 2.3E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 SUPERFAMILY SSF53187 14 400 4.19E-83 T 14-10-2018 Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 PIRSF PIRSF005962 14 403 2.3E-117 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 Gene3D G3DSA:3.40.630.10 28 385 4.8E-126 T 14-10-2018 Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 SUPERFAMILY SSF55031 196 311 3.59E-26 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 Pfam PF01546 Peptidase family M20/M25/M40 86 397 1.9E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu4428 a84f5c6a9f4477c47299983a6a675c1c 403 Gene3D G3DSA:3.30.70.360 194 310 4.8E-126 T 14-10-2018 Atu3718 9234263926070cec4bd61a72bc2f9c4a 146 SUPERFAMILY SSF54637 15 144 2.29E-36 T 14-10-2018 IPR029069 HotDog domain superfamily Atu3718 9234263926070cec4bd61a72bc2f9c4a 146 Pfam PF03061 Thioesterase superfamily 32 118 5.3E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atu3718 9234263926070cec4bd61a72bc2f9c4a 146 PIRSF PIRSF003230 9 146 1.5E-43 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Atu3718 9234263926070cec4bd61a72bc2f9c4a 146 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 22 130 3.3E-30 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Atu3718 9234263926070cec4bd61a72bc2f9c4a 146 Gene3D G3DSA:3.10.129.10 13 144 9.3E-37 T 14-10-2018 Atu3718 9234263926070cec4bd61a72bc2f9c4a 146 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 17 142 3.2E-50 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Atu0249 9ab355513713386f9636a278fec6d8a4 367 Gene3D G3DSA:3.40.190.10 155 325 3.0E-125 T 14-10-2018 Atu0249 9ab355513713386f9636a278fec6d8a4 367 Gene3D G3DSA:3.40.190.170 35 339 3.0E-125 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu0249 9ab355513713386f9636a278fec6d8a4 367 SUPERFAMILY SSF53850 140 267 5.25E-5 T 14-10-2018 Atu0249 9ab355513713386f9636a278fec6d8a4 367 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 54 325 1.4E-60 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu0249 9ab355513713386f9636a278fec6d8a4 367 PIRSF PIRSF039026 1 359 1.8E-127 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Atu0966 6e1a849c6deea56acc7f735b01d3c13d 144 SUPERFAMILY SSF54001 2 142 4.9E-19 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu0966 6e1a849c6deea56acc7f735b01d3c13d 144 Gene3D G3DSA:3.90.1720.10 1 143 3.0E-21 T 14-10-2018 Atu0966 6e1a849c6deea56acc7f735b01d3c13d 144 Pfam PF00877 NlpC/P60 family 17 137 4.5E-7 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Atu0966 6e1a849c6deea56acc7f735b01d3c13d 144 TIGRFAM TIGR02219 phage_NlpC_fam: putative phage cell wall peptidase, NlpC/P60 family 8 142 4.8E-75 T 14-10-2018 IPR011929 NlpC/P60 family, putative phage cell wall peptidase Atu4689 4c81243f9c228abbfaeff8773295b563 219 SUPERFAMILY SSF161098 13 211 3.27E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu4689 4c81243f9c228abbfaeff8773295b563 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 1.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4689 4c81243f9c228abbfaeff8773295b563 219 Gene3D G3DSA:1.10.3720.10 8 217 1.3E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu4689 4c81243f9c228abbfaeff8773295b563 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 2.6E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu2404 3797a6610a47ad44aecf9c99cbf82d24 118 Gene3D G3DSA:2.170.150.70 6 118 3.5E-30 T 14-10-2018 Atu2404 3797a6610a47ad44aecf9c99cbf82d24 118 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 106 1.1E-9 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Atu2404 3797a6610a47ad44aecf9c99cbf82d24 118 SUPERFAMILY SSF51316 2 115 9.94E-35 T 14-10-2018 IPR011057 Mss4-like superfamily Atu5042 761489ed0b732b6502a47a3bee6489cd 505 Gene3D G3DSA:3.40.50.1390 1 159 2.0E-31 T 14-10-2018 Atu5042 761489ed0b732b6502a47a3bee6489cd 505 Pfam PF07508 Recombinase 200 303 3.9E-16 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Atu5042 761489ed0b732b6502a47a3bee6489cd 505 SUPERFAMILY SSF53041 2 153 4.05E-23 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Atu5042 761489ed0b732b6502a47a3bee6489cd 505 SMART SM00857 3 154 1.9E-35 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atu5042 761489ed0b732b6502a47a3bee6489cd 505 Gene3D G3DSA:1.10.10.2600 193 304 2.8E-7 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Atu5042 761489ed0b732b6502a47a3bee6489cd 505 Pfam PF00239 Resolvase, N terminal domain 4 147 1.3E-23 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atu2188 6d199c6855e93710717c82fb548d1f53 370 SUPERFAMILY SSF51395 1 370 8.86E-122 T 14-10-2018 Atu2188 6d199c6855e93710717c82fb548d1f53 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 348 1.4E-84 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Atu2188 6d199c6855e93710717c82fb548d1f53 370 Gene3D G3DSA:3.20.20.70 1 370 7.0E-169 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3688 1c71fda389ef9255ab1298768d93431f 306 Pfam PF01497 Periplasmic binding protein 64 274 2.5E-22 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu3688 1c71fda389ef9255ab1298768d93431f 306 Gene3D G3DSA:3.40.50.1980 132 305 1.1E-36 T 14-10-2018 Atu3688 1c71fda389ef9255ab1298768d93431f 306 Gene3D G3DSA:3.40.50.1980 33 130 2.4E-20 T 14-10-2018 Atu3688 1c71fda389ef9255ab1298768d93431f 306 SUPERFAMILY SSF53807 39 302 8.24E-48 T 14-10-2018 Atu4858 102ec85c73343ade6b34de6ae7109ad5 554 Gene3D G3DSA:3.40.50.300 328 551 9.5E-45 T 14-10-2018 Atu4858 102ec85c73343ade6b34de6ae7109ad5 554 SUPERFAMILY SSF52540 109 552 2.65E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4858 102ec85c73343ade6b34de6ae7109ad5 554 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 145 548 4.7E-82 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Atu2561 ed45ca2b4ea4d45e51c58428d9b1f733 263 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 40 257 1.2E-60 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Atu2561 ed45ca2b4ea4d45e51c58428d9b1f733 263 Pfam PF13531 Bacterial extracellular solute-binding protein 35 259 1.6E-46 T 14-10-2018 Atu2561 ed45ca2b4ea4d45e51c58428d9b1f733 263 PIRSF PIRSF004846 4 263 3.1E-68 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Atu2561 ed45ca2b4ea4d45e51c58428d9b1f733 263 Gene3D G3DSA:3.40.190.10 113 223 3.1E-76 T 14-10-2018 Atu2561 ed45ca2b4ea4d45e51c58428d9b1f733 263 Gene3D G3DSA:3.40.190.10 36 259 3.1E-76 T 14-10-2018 Atu2561 ed45ca2b4ea4d45e51c58428d9b1f733 263 SUPERFAMILY SSF53850 33 260 9.32E-65 T 14-10-2018 Atu1432 2089d6836b660300efb71345f11acfc5 405 Gene3D G3DSA:3.30.559.10 163 402 1.1E-88 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Atu1432 2089d6836b660300efb71345f11acfc5 405 SUPERFAMILY SSF52777 173 404 4.05E-78 T 14-10-2018 Atu1432 2089d6836b660300efb71345f11acfc5 405 SUPERFAMILY SSF47005 90 136 1.57E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atu1432 2089d6836b660300efb71345f11acfc5 405 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 404 3.5E-81 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Atu1432 2089d6836b660300efb71345f11acfc5 405 Gene3D G3DSA:4.10.320.10 87 139 6.1E-19 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Atu1432 2089d6836b660300efb71345f11acfc5 405 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 2 405 4.7E-153 T 14-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 Atu1432 2089d6836b660300efb71345f11acfc5 405 Pfam PF02817 e3 binding domain 97 132 1.8E-17 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Atu1432 2089d6836b660300efb71345f11acfc5 405 Gene3D G3DSA:2.40.50.100 1 57 1.4E-5 T 14-10-2018 Atu3722 22c18aece58370d617d25b855130145f 346 Gene3D G3DSA:1.10.8.60 183 257 2.9E-27 T 14-10-2018 Atu3722 22c18aece58370d617d25b855130145f 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 9.2E-135 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Atu3722 22c18aece58370d617d25b855130145f 346 SMART SM00382 52 179 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3722 22c18aece58370d617d25b855130145f 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 169.444 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Atu3722 22c18aece58370d617d25b855130145f 346 PRINTS PR00819 CbxX/CfqX superfamily signature 168 187 1.1E-6 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Atu3722 22c18aece58370d617d25b855130145f 346 PRINTS PR00819 CbxX/CfqX superfamily signature 221 233 1.1E-6 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Atu3722 22c18aece58370d617d25b855130145f 346 PRINTS PR00819 CbxX/CfqX superfamily signature 55 70 1.1E-6 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Atu3722 22c18aece58370d617d25b855130145f 346 SUPERFAMILY SSF52540 21 254 3.58E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3722 22c18aece58370d617d25b855130145f 346 Gene3D G3DSA:3.40.50.300 19 182 2.7E-43 T 14-10-2018 Atu3722 22c18aece58370d617d25b855130145f 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 235 8.9E-112 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Atu3722 22c18aece58370d617d25b855130145f 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 334 2.0E-42 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Atu3722 22c18aece58370d617d25b855130145f 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 6.4E-32 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Atu3722 22c18aece58370d617d25b855130145f 346 SUPERFAMILY SSF46785 257 331 1.27E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3722 22c18aece58370d617d25b855130145f 346 Gene3D G3DSA:1.10.10.10 258 336 6.5E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4388 adecfc12eeff5cda94f4ce063e9acc32 448 Gene3D G3DSA:1.20.210.10 1 441 5.3E-128 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4388 adecfc12eeff5cda94f4ce063e9acc32 448 SUPERFAMILY SSF81442 3 431 6.54E-92 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4388 adecfc12eeff5cda94f4ce063e9acc32 448 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 7 416 4.7E-82 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3481 038464ce0a4dfcbcc0f3d58f845897aa 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 255 2.1E-56 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Atu3481 038464ce0a4dfcbcc0f3d58f845897aa 258 SUPERFAMILY SSF52096 3 256 2.13E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3481 038464ce0a4dfcbcc0f3d58f845897aa 258 Gene3D G3DSA:3.90.226.10 1 196 9.1E-56 T 14-10-2018 Atu3481 038464ce0a4dfcbcc0f3d58f845897aa 258 Gene3D G3DSA:1.10.12.10 200 258 6.1E-16 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Atu1210 9b176d6828968f65e746358fae067204 662 PRINTS PR01607 Apyrase family signature 268 291 3.2E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 PRINTS PR01607 Apyrase family signature 309 329 3.2E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 PRINTS PR01607 Apyrase family signature 40 58 3.2E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 PRINTS PR01607 Apyrase family signature 455 478 3.2E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 PRINTS PR01607 Apyrase family signature 240 257 3.2E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 PRINTS PR01607 Apyrase family signature 555 574 3.2E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 Pfam PF00149 Calcineurin-like phosphoesterase 42 284 1.8E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu1210 9b176d6828968f65e746358fae067204 662 ProSitePatterns PS00786 5'-nucleotidase signature 2. 128 139 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 SUPERFAMILY SSF56300 35 381 1.92E-83 T 14-10-2018 Atu1210 9b176d6828968f65e746358fae067204 662 Gene3D G3DSA:3.60.21.10 34 383 1.9E-122 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu1210 9b176d6828968f65e746358fae067204 662 Pfam PF02872 5'-nucleotidase, C-terminal domain 385 578 9.5E-23 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 Gene3D G3DSA:3.90.780.10 430 617 3.9E-55 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu1210 9b176d6828968f65e746358fae067204 662 SUPERFAMILY SSF55816 384 619 1.31E-45 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Atu3042 5a933f85f813b45138464020590a2e62 358 Gene3D G3DSA:3.40.1610.10 3 222 2.2E-54 T 14-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal Atu3042 5a933f85f813b45138464020590a2e62 358 Pfam PF06032 Protein of unknown function (DUF917) 8 356 7.2E-125 T 14-10-2018 IPR010318 Protein of unknown function DUF917 Atu3042 5a933f85f813b45138464020590a2e62 358 SUPERFAMILY SSF160991 3 355 1.83E-116 T 14-10-2018 Atu3042 5a933f85f813b45138464020590a2e62 358 Gene3D G3DSA:2.40.390.10 226 345 7.2E-8 T 14-10-2018 IPR024071 Protein of unknown function DUF917, C-terminal Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 PIRSF PIRSF036484 1 403 7.3E-252 T 14-10-2018 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 Pfam PF00365 Phosphofructokinase 5 293 1.8E-34 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 145 162 2.3E-14 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 112 128 2.3E-14 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 184 200 2.3E-14 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 2.3E-14 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 Hamap MF_01977 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 2 399 64.001 T 14-10-2018 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 Gene3D G3DSA:3.40.50.450 1 214 6.6E-41 T 14-10-2018 Atu2115 1fb08d02f7af50dc0e5abe07747f46cf 403 SUPERFAMILY SSF53784 4 401 1.31E-73 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Atu1510 bfdcec2287bc983cf24ee1232019606a 96 PIRSF PIRSF029218 1 93 7.0E-24 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 Atu1510 bfdcec2287bc983cf24ee1232019606a 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 2.6E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu1510 bfdcec2287bc983cf24ee1232019606a 96 Gene3D G3DSA:3.30.2310.20 1 94 1.0E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu6079 dd4f7e22f6193dccf17938914f1d32a8 430 SUPERFAMILY SSF51679 1 429 4.06E-111 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu6079 dd4f7e22f6193dccf17938914f1d32a8 430 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 13 425 5.0E-136 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu6079 dd4f7e22f6193dccf17938914f1d32a8 430 PIRSF PIRSF000337 1 430 1.2E-168 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu6079 dd4f7e22f6193dccf17938914f1d32a8 430 Pfam PF00296 Luciferase-like monooxygenase 32 381 1.3E-56 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu6079 dd4f7e22f6193dccf17938914f1d32a8 430 Gene3D G3DSA:3.20.20.30 1 430 3.2E-136 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 SUPERFAMILY SSF56601 199 573 7.04E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 SUPERFAMILY SSF53955 31 250 4.78E-60 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 Pfam PF00912 Transglycosylase 42 217 1.3E-45 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 Gene3D G3DSA:3.40.710.10 245 598 7.1E-65 T 14-10-2018 Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 Pfam PF00905 Penicillin binding protein transpeptidase domain 294 530 1.2E-15 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 Gene3D G3DSA:1.10.3810.10 33 233 9.9E-50 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 23 566 6.4E-194 T 14-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu3694 edaf149cc4f5a0fdbce8d17e80337516 681 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 594 678 1.2E-21 T 14-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu3065 c1c81a3a0be27fe3304f40e0c3dbb949 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 314 7.1E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu2438 9a7c7294611cdbaffa93d62d118378ea 215 Gene3D G3DSA:1.10.287.130 4 78 3.7E-31 T 14-10-2018 Atu2438 9a7c7294611cdbaffa93d62d118378ea 215 Gene3D G3DSA:3.30.565.10 79 211 2.9E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2438 9a7c7294611cdbaffa93d62d118378ea 215 Pfam PF10090 Histidine phosphotransferase C-terminal domain 83 204 1.4E-38 T 14-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal Atu4651 48a2d552136d9dbb3148ce9585687f90 456 Gene3D G3DSA:1.20.200.10 66 413 4.9E-100 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 SUPERFAMILY SSF48557 1 426 2.83E-94 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 Pfam PF00206 Lyase 10 259 1.6E-40 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00145 Argininosuccinate lyase family signature 234 250 4.7E-24 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00145 Argininosuccinate lyase family signature 152 168 4.7E-24 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00145 Argininosuccinate lyase family signature 60 82 4.7E-24 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00145 Argininosuccinate lyase family signature 101 121 4.7E-24 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00145 Argininosuccinate lyase family signature 190 214 4.7E-24 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00149 Fumarate lyase superfamily signature 106 124 1.9E-16 T 14-10-2018 IPR000362 Fumarate lyase family Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00149 Fumarate lyase superfamily signature 61 79 1.9E-16 T 14-10-2018 IPR000362 Fumarate lyase family Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00149 Fumarate lyase superfamily signature 190 217 1.9E-16 T 14-10-2018 IPR000362 Fumarate lyase family Atu4651 48a2d552136d9dbb3148ce9585687f90 456 PRINTS PR00149 Fumarate lyase superfamily signature 234 250 1.9E-16 T 14-10-2018 IPR000362 Fumarate lyase family Atu4651 48a2d552136d9dbb3148ce9585687f90 456 Pfam PF14698 Argininosuccinate lyase C-terminal 325 400 2.8E-9 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 Gene3D G3DSA:1.10.40.30 322 401 4.9E-100 T 14-10-2018 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 422 2.6E-88 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Atu4651 48a2d552136d9dbb3148ce9585687f90 456 Gene3D G3DSA:1.10.275.50 1 65 4.3E-10 T 14-10-2018 Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 240 8.9E-65 T 14-10-2018 Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 Gene3D G3DSA:3.40.50.720 1 242 3.6E-78 T 14-10-2018 Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.9E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 SUPERFAMILY SSF51735 6 240 1.58E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5438 ea1e7dda866fb22bbd20c0bdc31f2de0 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 3.7E-5 T 14-10-2018 Atu2133 06c6381f3ee1009340611d1fdaa3f134 460 Gene3D G3DSA:2.40.440.10 267 460 6.1E-47 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2133 06c6381f3ee1009340611d1fdaa3f134 460 SUPERFAMILY SSF141523 328 457 4.32E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2133 06c6381f3ee1009340611d1fdaa3f134 460 SUPERFAMILY SSF47090 174 238 3.92E-6 T 14-10-2018 IPR036365 PGBD-like superfamily Atu2133 06c6381f3ee1009340611d1fdaa3f134 460 Pfam PF03734 L,D-transpeptidase catalytic domain 336 454 1.5E-17 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu1046 8088cd2f770c291c0bb8d20b978502fa 347 Gene3D G3DSA:3.40.190.10 38 316 2.9E-59 T 14-10-2018 Atu1046 8088cd2f770c291c0bb8d20b978502fa 347 Pfam PF09084 NMT1/THI5 like 49 263 2.0E-39 T 14-10-2018 IPR015168 SsuA/THI5-like Atu1046 8088cd2f770c291c0bb8d20b978502fa 347 Gene3D G3DSA:3.40.190.10 119 225 2.9E-59 T 14-10-2018 Atu1046 8088cd2f770c291c0bb8d20b978502fa 347 SUPERFAMILY SSF53850 36 274 9.45E-31 T 14-10-2018 Atu0894 d5507d066b4de38dbd1c87ebcc8029e0 302 Gene3D G3DSA:1.10.3720.10 100 295 9.7E-37 T 14-10-2018 IPR035906 MetI-like superfamily Atu0894 d5507d066b4de38dbd1c87ebcc8029e0 302 SUPERFAMILY SSF161098 102 285 6.15E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu0894 d5507d066b4de38dbd1c87ebcc8029e0 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 282 5.4E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 277 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 7.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 7.0E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 SUPERFAMILY SSF46689 233 282 3.4E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 SMART SM00342 200 281 7.2E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 SUPERFAMILY SSF51182 24 76 3.25E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4319 e43215f6c05c15d525d5a68347ed7900 294 Gene3D G3DSA:1.10.10.60 232 286 4.4E-15 T 14-10-2018 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 Gene3D G3DSA:1.10.10.60 180 231 3.5E-11 T 14-10-2018 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 Pfam PF12833 Helix-turn-helix domain 203 281 5.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 SUPERFAMILY SSF46689 182 231 1.34E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4319 e43215f6c05c15d525d5a68347ed7900 294 Gene3D G3DSA:2.60.120.10 15 106 1.7E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 268 361 6.7E-16 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 Gene3D G3DSA:2.40.37.10 5 393 4.1E-111 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 59 71 1.9E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 167 180 1.9E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 256 275 1.9E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 39 57 1.9E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 Gene3D G3DSA:3.20.20.10 17 268 4.1E-111 T 14-10-2018 IPR029066 PLP-binding barrel Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 SUPERFAMILY SSF50621 242 392 2.07E-36 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 SUPERFAMILY SSF51419 9 267 8.0E-60 T 14-10-2018 IPR029066 PLP-binding barrel Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01182 Ornithine decarboxylase signature 328 338 6.4E-9 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01182 Ornithine decarboxylase signature 81 105 6.4E-9 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01182 Ornithine decarboxylase signature 37 64 6.4E-9 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 PRINTS PR01182 Ornithine decarboxylase signature 348 361 6.4E-9 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu1673 19ecc22d2d38f910092c3f8b0cb4b931 393 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 21 265 5.3E-45 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Atu3100 f9ef81232281ba3fec3553ef95512db8 275 SUPERFAMILY SSF161098 5 270 2.35E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu3100 f9ef81232281ba3fec3553ef95512db8 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 263 2.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3100 f9ef81232281ba3fec3553ef95512db8 275 Gene3D G3DSA:1.10.3720.10 1 264 4.5E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu1240 10f58c6cf9cebd9af4cd7a4fde061caa 409 SUPERFAMILY SSF55729 182 366 1.32E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1240 10f58c6cf9cebd9af4cd7a4fde061caa 409 Pfam PF13480 Acetyltransferase (GNAT) domain 193 346 8.3E-31 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Atu0956 62de46ea9cc2dc2b3f026c20e655e3a0 190 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 26 161 7.9E-35 T 14-10-2018 IPR006433 Prohead protease Atu0956 62de46ea9cc2dc2b3f026c20e655e3a0 190 SUPERFAMILY SSF50789 28 128 9.59E-6 T 14-10-2018 Atu0956 62de46ea9cc2dc2b3f026c20e655e3a0 190 Pfam PF04586 Caudovirus prohead serine protease 18 158 3.3E-32 T 14-10-2018 IPR006433 Prohead protease Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 129 7.4E-21 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 129 6.6E-27 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 Gene3D G3DSA:3.90.470.20 1 129 2.2E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 96 3.7E-15 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 SUPERFAMILY SSF56214 1 128 6.02E-27 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 98 5.0E-48 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atu1033 8c7e2d64e18fdd8c4facee3e319fb28c 134 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 129 23.644 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 PRINTS PR01439 Cellulose synthase subunit A signature 54 74 1.0E-13 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 PRINTS PR01439 Cellulose synthase subunit A signature 467 486 1.0E-13 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 PRINTS PR01439 Cellulose synthase subunit A signature 137 156 1.0E-13 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 PRINTS PR01439 Cellulose synthase subunit A signature 539 560 1.0E-13 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 PRINTS PR01439 Cellulose synthase subunit A signature 398 424 1.0E-13 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 Gene3D G3DSA:3.90.550.10 118 358 1.2E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3309 3c298f7e94c7e077484908e2df0317a4 729 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 2 713 0.0 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 Pfam PF00535 Glycosyl transferase family 2 131 319 4.4E-46 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 Pfam PF07238 PilZ domain 569 670 1.6E-5 T 14-10-2018 IPR009875 PilZ domain GO:0035438 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 Pfam PF03552 Cellulose synthase 326 449 5.7E-9 T 14-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 Atu3309 3c298f7e94c7e077484908e2df0317a4 729 SUPERFAMILY SSF53448 127 474 5.79E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1926 f2e32bca447eb9904786ec4c920d895f 196 SUPERFAMILY SSF52540 1 192 1.53E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1926 f2e32bca447eb9904786ec4c920d895f 196 PRINTS PR00094 Adenylate kinase signature 139 154 7.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 PRINTS PR00094 Adenylate kinase signature 81 97 7.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 PRINTS PR00094 Adenylate kinase signature 4 17 7.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 PRINTS PR00094 Adenylate kinase signature 156 170 7.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 PRINTS PR00094 Adenylate kinase signature 32 46 7.5E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 Pfam PF00406 Adenylate kinase 6 169 9.8E-57 T 14-10-2018 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 Gene3D G3DSA:3.40.50.300 1 196 3.6E-67 T 14-10-2018 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 Hamap MF_00235 Adenylate kinase [adk]. 1 192 46.599 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Atu1926 f2e32bca447eb9904786ec4c920d895f 196 TIGRFAM TIGR01351 adk: adenylate kinase 2 130 2.3E-52 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 Gene3D G3DSA:3.40.50.300 1 242 8.8E-54 T 14-10-2018 Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 SUPERFAMILY SSF52540 246 494 2.77E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 SMART SM00382 30 219 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 SMART SM00382 289 494 3.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 Pfam PF00005 ABC transporter 21 172 1.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 Gene3D G3DSA:3.40.50.300 256 509 2.5E-42 T 14-10-2018 Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 Pfam PF00005 ABC transporter 280 436 3.6E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2347 6fbbb406a96aab3785f9ca04b598b64c 512 SUPERFAMILY SSF52540 4 226 3.59E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5023 06f1d08f2a1e6d187e5ecb92467c584f 577 Pfam PF13175 AAA ATPase domain 151 321 6.3E-19 T 14-10-2018 Atu5023 06f1d08f2a1e6d187e5ecb92467c584f 577 Pfam PF13175 AAA ATPase domain 3 77 8.6E-14 T 14-10-2018 Atu5023 06f1d08f2a1e6d187e5ecb92467c584f 577 Gene3D G3DSA:3.40.50.300 2 339 1.7E-29 T 14-10-2018 Atu5023 06f1d08f2a1e6d187e5ecb92467c584f 577 SUPERFAMILY SSF52540 2 328 6.22E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6036 6f185a4c8ec2fe08cbb2167618d160a3 72 ProDom PD026958 PLASMID TRBK ENTRY-EXCLUSION TIORF12 CONJUGAL TRANSFER PRECURSOR SIGNAL CONJUGATION AGR_PTI_78P 1 72 3.0E-24 T 14-10-2018 Atu6036 6f185a4c8ec2fe08cbb2167618d160a3 72 Pfam PF10907 Protein of unknown function (DUF2749) 2 72 7.6E-34 T 14-10-2018 IPR024475 Type IV conjugative transfer protein TrbJ/K, C-terminal Atu6036 6f185a4c8ec2fe08cbb2167618d160a3 72 TIGRFAM TIGR04361 TrbK_Ti: entry exclusion protein TrbK 3 72 9.3E-25 T 14-10-2018 IPR020065 Conjugal transfer protein TrbK Atu0811 f008c54b1b9f16e9d5d8e7aa4612e9f8 544 Gene3D G3DSA:3.50.50.60 28 276 1.5E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0811 f008c54b1b9f16e9d5d8e7aa4612e9f8 544 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 23 513 55.245 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 Atu0811 f008c54b1b9f16e9d5d8e7aa4612e9f8 544 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 27 511 4.2E-210 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 Atu0811 f008c54b1b9f16e9d5d8e7aa4612e9f8 544 Gene3D G3DSA:3.30.9.10 132 197 1.5E-8 T 14-10-2018 Atu0811 f008c54b1b9f16e9d5d8e7aa4612e9f8 544 SUPERFAMILY SSF51905 22 352 2.59E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0811 f008c54b1b9f16e9d5d8e7aa4612e9f8 544 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 26 513 5.4E-233 T 14-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 Atu2305 51f21563efbc217835efa436616e63fb 396 Gene3D G3DSA:1.20.1250.20 6 389 3.1E-22 T 14-10-2018 Atu2305 51f21563efbc217835efa436616e63fb 396 SUPERFAMILY SSF103473 11 389 4.45E-30 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2305 51f21563efbc217835efa436616e63fb 396 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 386 1.1E-129 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB Atu0358 24b228553881602aac1faefdfa12a872 168 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 160 25.182 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Atu0358 24b228553881602aac1faefdfa12a872 168 Pfam PF02130 Uncharacterized protein family UPF0054 19 154 1.8E-39 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Atu0358 24b228553881602aac1faefdfa12a872 168 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 50 156 1.1E-39 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Atu0358 24b228553881602aac1faefdfa12a872 168 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 126 136 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Atu0358 24b228553881602aac1faefdfa12a872 168 Gene3D G3DSA:3.40.390.30 2 166 8.5E-49 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Atu0358 24b228553881602aac1faefdfa12a872 168 SUPERFAMILY SSF55486 47 162 3.66E-46 T 14-10-2018 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 Gene3D G3DSA:3.20.20.100 1 275 1.1E-111 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu0867 31f08f8f35e060d8f661675f4f17abca 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 Pfam PF00248 Aldo/keto reductase family 14 256 1.1E-54 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PIRSF PIRSF000097 4 110 1.2E-31 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PIRSF PIRSF000097 108 272 2.8E-35 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PRINTS PR00069 Aldo-keto reductase signature 191 215 8.4E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PRINTS PR00069 Aldo-keto reductase signature 89 107 8.4E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PRINTS PR00069 Aldo-keto reductase signature 154 183 8.4E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PRINTS PR00069 Aldo-keto reductase signature 120 137 8.4E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 PRINTS PR00069 Aldo-keto reductase signature 33 57 8.4E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu0867 31f08f8f35e060d8f661675f4f17abca 275 SUPERFAMILY SSF51430 6 261 9.17E-86 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3741 32f36ecc4fa3d8a13534bd1345b9dd2d 429 Gene3D G3DSA:1.20.1250.20 3 192 4.0E-13 T 14-10-2018 Atu3741 32f36ecc4fa3d8a13534bd1345b9dd2d 429 Pfam PF07690 Major Facilitator Superfamily 204 387 1.6E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu3741 32f36ecc4fa3d8a13534bd1345b9dd2d 429 Gene3D G3DSA:1.20.1250.20 197 385 4.6E-21 T 14-10-2018 Atu3741 32f36ecc4fa3d8a13534bd1345b9dd2d 429 SUPERFAMILY SSF103473 4 381 4.05E-43 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0392 51e90b4fd6f7b4d57e08d903ec237d5d 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 301 8.4E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0392 51e90b4fd6f7b4d57e08d903ec237d5d 308 SUPERFAMILY SSF161098 71 295 1.11E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu0392 51e90b4fd6f7b4d57e08d903ec237d5d 308 Gene3D G3DSA:1.10.3720.10 67 306 3.0E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu0818 2ffec6372436974a0bc7c12cd8245633 253 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 43 236 1.1E-81 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 Atu0818 2ffec6372436974a0bc7c12cd8245633 253 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 212 6.2E-36 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Atu0818 2ffec6372436974a0bc7c12cd8245633 253 PIRSF PIRSF000857 2 243 3.3E-71 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Atu0818 2ffec6372436974a0bc7c12cd8245633 253 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 2 238 36.906 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Atu0818 2ffec6372436974a0bc7c12cd8245633 253 SUPERFAMILY SSF52402 16 200 8.37E-40 T 14-10-2018 Atu0818 2ffec6372436974a0bc7c12cd8245633 253 Gene3D G3DSA:3.40.50.620 14 244 6.8E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu5341 e2f13181b946078e43e7335158ef6da4 322 Pfam PF01965 DJ-1/PfpI family 39 174 1.1E-11 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu5341 e2f13181b946078e43e7335158ef6da4 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 311 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Atu5341 e2f13181b946078e43e7335158ef6da4 322 SUPERFAMILY SSF46689 217 265 1.25E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5341 e2f13181b946078e43e7335158ef6da4 322 Gene3D G3DSA:1.10.10.60 211 316 2.3E-25 T 14-10-2018 Atu5341 e2f13181b946078e43e7335158ef6da4 322 SMART SM00342 232 315 8.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5341 e2f13181b946078e43e7335158ef6da4 322 SUPERFAMILY SSF46689 268 311 1.93E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5341 e2f13181b946078e43e7335158ef6da4 322 Gene3D G3DSA:3.40.50.880 4 198 9.5E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu5341 e2f13181b946078e43e7335158ef6da4 322 Pfam PF12833 Helix-turn-helix domain 238 312 1.4E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu5341 e2f13181b946078e43e7335158ef6da4 322 SUPERFAMILY SSF52317 6 190 3.58E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 SUPERFAMILY SSF52540 7 230 5.13E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 Gene3D G3DSA:3.40.50.300 2 240 6.2E-55 T 14-10-2018 Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 Gene3D G3DSA:3.40.50.300 261 490 4.3E-43 T 14-10-2018 Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 Pfam PF00005 ABC transporter 272 425 1.0E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 SUPERFAMILY SSF52540 270 475 1.14E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 Pfam PF00005 ABC transporter 23 172 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 SMART SM00382 280 474 9.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3818 b91b4df932cd0d19acc0ef96bace06d6 499 SMART SM00382 32 220 6.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1495 73062ea306710d6961dfe17a471ef197 260 SUPERFAMILY SSF51556 1 255 5.11E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu1495 73062ea306710d6961dfe17a471ef197 260 Gene3D G3DSA:3.20.20.140 1 259 2.2E-89 T 14-10-2018 Atu1495 73062ea306710d6961dfe17a471ef197 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atu1495 73062ea306710d6961dfe17a471ef197 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 2.6E-83 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Atu1495 73062ea306710d6961dfe17a471ef197 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atu1495 73062ea306710d6961dfe17a471ef197 260 Pfam PF01026 TatD related DNase 3 255 1.1E-78 T 14-10-2018 IPR001130 TatD family GO:0016788 Atu1495 73062ea306710d6961dfe17a471ef197 260 PIRSF PIRSF005902 1 258 5.8E-76 T 14-10-2018 IPR001130 TatD family GO:0016788 Atu1268 d713a5b1830ff2e612c9b0fe1b26cb7d 121 Gene3D G3DSA:1.20.58.1610 1 121 1.6E-43 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1268 d713a5b1830ff2e612c9b0fe1b26cb7d 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 19.989 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Atu1268 d713a5b1830ff2e612c9b0fe1b26cb7d 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 120 1.2E-37 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu5454 a4a55da2543f7ac9dac84345bc7c95f9 354 Gene3D G3DSA:2.40.370.10 46 233 1.9E-67 T 14-10-2018 IPR023374 AttH-like domain superfamily Atu5454 a4a55da2543f7ac9dac84345bc7c95f9 354 SUPERFAMILY SSF159245 35 354 3.4E-109 T 14-10-2018 Atu5454 a4a55da2543f7ac9dac84345bc7c95f9 354 Pfam PF17186 Lipocalin-like domain 233 354 3.2E-42 T 14-10-2018 Atu5454 a4a55da2543f7ac9dac84345bc7c95f9 354 Pfam PF07143 CrtC N-terminal lipocalin domain 58 230 7.6E-57 T 14-10-2018 IPR010791 AttH domain Atu5454 a4a55da2543f7ac9dac84345bc7c95f9 354 Gene3D G3DSA:2.40.370.10 234 354 5.9E-34 T 14-10-2018 IPR023374 AttH-like domain superfamily Atu4236 4893e5f26d924e8dd9ac3244fa1e6d34 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 377 3.8E-103 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Atu4236 4893e5f26d924e8dd9ac3244fa1e6d34 392 Gene3D G3DSA:1.20.1090.10 184 388 9.6E-56 T 14-10-2018 Atu4236 4893e5f26d924e8dd9ac3244fa1e6d34 392 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atu4236 4893e5f26d924e8dd9ac3244fa1e6d34 392 Gene3D G3DSA:3.40.50.1970 3 183 1.8E-49 T 14-10-2018 Atu4236 4893e5f26d924e8dd9ac3244fa1e6d34 392 SUPERFAMILY SSF56796 6 387 3.01E-107 T 14-10-2018 Atu1714 504d4d568623d85bac99a3c8ee2bf8ef 265 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Atu1714 504d4d568623d85bac99a3c8ee2bf8ef 265 SUPERFAMILY SSF56219 1 260 1.19E-81 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu1714 504d4d568623d85bac99a3c8ee2bf8ef 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 256 6.2E-74 T 14-10-2018 Atu1714 504d4d568623d85bac99a3c8ee2bf8ef 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 258 2.7E-70 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Atu1714 504d4d568623d85bac99a3c8ee2bf8ef 265 Gene3D G3DSA:3.60.10.10 1 259 2.5E-70 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu1714 504d4d568623d85bac99a3c8ee2bf8ef 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 252 1.3E-22 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atu3253 967fc33d61e66871eb261db56f07e3fc 324 PIRSF PIRSF006470 1 322 9.4E-70 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3253 967fc33d61e66871eb261db56f07e3fc 324 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 285 4.0E-60 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3253 967fc33d61e66871eb261db56f07e3fc 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 306 3.9E-70 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu3253 967fc33d61e66871eb261db56f07e3fc 324 Gene3D G3DSA:3.40.190.170 25 315 1.2E-85 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu5322 2154f855b00f7c02c31db9c30fb8b873 235 SUPERFAMILY SSF52218 19 221 1.06E-65 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu5322 2154f855b00f7c02c31db9c30fb8b873 235 Pfam PF03358 NADPH-dependent FMN reductase 29 172 1.7E-28 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Atu5322 2154f855b00f7c02c31db9c30fb8b873 235 Gene3D G3DSA:3.40.50.360 3 235 4.0E-80 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu5322 2154f855b00f7c02c31db9c30fb8b873 235 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 4 221 2.0E-123 T 14-10-2018 IPR014063 Arsenate resistance ArsH Atu1371 6c85cff3f90d7cb825ff281672ec156d 239 SUPERFAMILY SSF51695 6 223 2.88E-53 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu1371 6c85cff3f90d7cb825ff281672ec156d 239 Gene3D G3DSA:3.20.20.190 3 229 8.8E-46 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu1371 6c85cff3f90d7cb825ff281672ec156d 239 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 215 2.2E-23 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Atu5413 378e046cf444256cd84f4593ec1467f0 273 SUPERFAMILY SSF161098 25 263 1.12E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu5413 378e046cf444256cd84f4593ec1467f0 273 Gene3D G3DSA:1.10.3720.10 11 272 4.7E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu5413 378e046cf444256cd84f4593ec1467f0 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 1.0E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4460 6a1aa279d168d7457d62d238f1e58ec1 78 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 36 2.9E-4 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 PRINTS PR00773 GrpE protein signature 167 186 1.9E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 PRINTS PR00773 GrpE protein signature 80 95 1.9E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 PRINTS PR00773 GrpE protein signature 140 155 1.9E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 PRINTS PR00773 GrpE protein signature 52 68 1.9E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 Pfam PF01025 GrpE 26 188 1.1E-52 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 Gene3D G3DSA:3.90.20.20 22 131 1.0E-26 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 SUPERFAMILY SSF51064 133 189 5.1E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 SUPERFAMILY SSF58014 37 132 1.7E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 Gene3D G3DSA:2.30.22.10 132 188 2.2E-24 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Atu0329 38df51a80ec09843cdaa0f1b45bf6d46 211 Hamap MF_01151 Protein GrpE [grpE]. 3 188 20.08 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Atu8203 8572a3fa126b01940e18a7d5b2b53c4e 94 Pfam PF13441 YMGG-like Gly-zipper 19 61 2.3E-8 T 14-10-2018 IPR027367 YMGG-like Gly-zipper Atu4117 90b4ed306a57bf1012436f820696a50b 281 SUPERFAMILY SSF52540 8 253 2.89E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4117 90b4ed306a57bf1012436f820696a50b 281 SMART SM00382 39 231 5.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4117 90b4ed306a57bf1012436f820696a50b 281 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4117 90b4ed306a57bf1012436f820696a50b 281 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 4.7E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4117 90b4ed306a57bf1012436f820696a50b 281 Pfam PF00005 ABC transporter 30 181 4.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4117 90b4ed306a57bf1012436f820696a50b 281 Gene3D G3DSA:3.40.50.300 3 281 2.9E-84 T 14-10-2018 Atu0564 449673db2e761a54e35956a0f2beaf51 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 348 1.8E-110 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atu0564 449673db2e761a54e35956a0f2beaf51 360 Gene3D G3DSA:3.40.1690.10 219 359 6.7E-52 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Atu0564 449673db2e761a54e35956a0f2beaf51 360 SUPERFAMILY SSF160544 247 351 1.24E-36 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Atu0564 449673db2e761a54e35956a0f2beaf51 360 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 2.5E-118 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Atu0564 449673db2e761a54e35956a0f2beaf51 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 210 228 1.8E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atu0564 449673db2e761a54e35956a0f2beaf51 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 274 289 1.8E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atu0564 449673db2e761a54e35956a0f2beaf51 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.8E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atu0564 449673db2e761a54e35956a0f2beaf51 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 230 247 1.8E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atu0564 449673db2e761a54e35956a0f2beaf51 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 304 325 1.8E-39 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Atu3067 46f5d902e2b7046b39d3879b7caba8c8 256 Pfam PF07090 Putative glutamine amidotransferase 4 253 4.0E-126 T 14-10-2018 IPR010768 Putative glutamine amidotransferase Atu3067 46f5d902e2b7046b39d3879b7caba8c8 256 PIRSF PIRSF034405 1 256 2.4E-129 T 14-10-2018 IPR017027 Uncharacterised conserved protein UCP034405 Atu3067 46f5d902e2b7046b39d3879b7caba8c8 256 SUPERFAMILY SSF52317 4 253 4.12E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3067 46f5d902e2b7046b39d3879b7caba8c8 256 Gene3D G3DSA:3.40.50.880 1 255 1.6E-90 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0533 871063e2f88c346a4d94c233fd385633 207 PIRSF PIRSF006305 1 202 1.7E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu0533 871063e2f88c346a4d94c233fd385633 207 Hamap MF_00528 Septum formation protein Maf [maf]. 7 200 32.15 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu0533 871063e2f88c346a4d94c233fd385633 207 Gene3D G3DSA:3.90.950.10 2 197 4.0E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atu0533 871063e2f88c346a4d94c233fd385633 207 SUPERFAMILY SSF52972 6 194 2.49E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Atu0533 871063e2f88c346a4d94c233fd385633 207 Pfam PF02545 Maf-like protein 7 194 2.1E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu0533 871063e2f88c346a4d94c233fd385633 207 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 193 9.4E-49 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Atu3491 35b4e6f6a38443777564c7b191411fa6 107 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 4 107 31.832 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 Atu3491 35b4e6f6a38443777564c7b191411fa6 107 Gene3D G3DSA:3.30.70.100 2 100 8.4E-39 T 14-10-2018 Atu3491 35b4e6f6a38443777564c7b191411fa6 107 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 7 106 1.1E-31 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 Atu3491 35b4e6f6a38443777564c7b191411fa6 107 Pfam PF05336 L-rhamnose mutarotase 7 106 4.7E-26 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 Atu3491 35b4e6f6a38443777564c7b191411fa6 107 SUPERFAMILY SSF54909 4 107 3.91E-36 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3289 accf9fbb155f5b594a1d6b0e76c6300f 220 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 29 205 2.6E-52 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3289 accf9fbb155f5b594a1d6b0e76c6300f 220 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 212 25.334 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3289 accf9fbb155f5b594a1d6b0e76c6300f 220 SUPERFAMILY SSF51391 4 211 4.05E-58 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3289 accf9fbb155f5b594a1d6b0e76c6300f 220 Gene3D G3DSA:3.20.20.70 1 212 5.9E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3289 accf9fbb155f5b594a1d6b0e76c6300f 220 Pfam PF02581 Thiamine monophosphate synthase 11 194 3.4E-55 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu0437 f11992d1178479b27e541b7e0dbc12d8 226 Pfam PF10053 Uncharacterized conserved protein (DUF2290) 18 221 3.3E-70 T 14-10-2018 IPR018742 Protein of unknown function DUF2290 Atu1349 446b9038122c41912e359aafc7f78872 122 Pfam PF01627 Hpt domain 43 108 2.9E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Atu1349 446b9038122c41912e359aafc7f78872 122 Gene3D G3DSA:1.20.120.160 18 120 5.1E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atu1349 446b9038122c41912e359aafc7f78872 122 SUPERFAMILY SSF47226 24 119 1.14E-17 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Atu0751 f057fabdb3eec1d580dc79cacfa5abeb 226 Pfam PF00005 ABC transporter 28 162 1.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0751 f057fabdb3eec1d580dc79cacfa5abeb 226 SUPERFAMILY SSF52540 10 209 5.45E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0751 f057fabdb3eec1d580dc79cacfa5abeb 226 Gene3D G3DSA:3.40.50.300 1 226 2.0E-54 T 14-10-2018 Atu0751 f057fabdb3eec1d580dc79cacfa5abeb 226 SMART SM00382 26 206 7.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0751 f057fabdb3eec1d580dc79cacfa5abeb 226 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3396 ecd75b1cb292ca53f8b7e439afb59d45 343 Pfam PF01497 Periplasmic binding protein 54 317 3.8E-51 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu3396 ecd75b1cb292ca53f8b7e439afb59d45 343 SUPERFAMILY SSF53807 50 336 3.22E-42 T 14-10-2018 Atu3396 ecd75b1cb292ca53f8b7e439afb59d45 343 Gene3D G3DSA:3.40.50.1980 29 150 1.3E-25 T 14-10-2018 Atu3396 ecd75b1cb292ca53f8b7e439afb59d45 343 Gene3D G3DSA:3.40.50.1980 158 340 8.1E-51 T 14-10-2018 Atu1843 528d59348f274d25ef76a920b8d5834f 254 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 239 5.8E-67 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Atu1843 528d59348f274d25ef76a920b8d5834f 254 Gene3D G3DSA:3.30.200.20 7 235 1.6E-95 T 14-10-2018 Atu1843 528d59348f274d25ef76a920b8d5834f 254 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu1843 528d59348f274d25ef76a920b8d5834f 254 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.272 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu1843 528d59348f274d25ef76a920b8d5834f 254 SUPERFAMILY SSF56104 5 236 3.27E-77 T 14-10-2018 Atu1843 528d59348f274d25ef76a920b8d5834f 254 Gene3D G3DSA:3.30.470.20 85 224 1.6E-95 T 14-10-2018 Atu1843 528d59348f274d25ef76a920b8d5834f 254 Pfam PF01259 SAICAR synthetase 7 235 1.2E-60 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu4589 f0f2526586aeb2213f252184749c92d5 93 Gene3D G3DSA:1.20.1530.20 1 87 1.1E-29 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu3267 8dff551c8e87cf4ce8bee7dd8c301ee2 291 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 65 2.5E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu3267 8dff551c8e87cf4ce8bee7dd8c301ee2 291 SUPERFAMILY SSF161098 85 289 5.1E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu3267 8dff551c8e87cf4ce8bee7dd8c301ee2 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 289 3.2E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3267 8dff551c8e87cf4ce8bee7dd8c301ee2 291 Gene3D G3DSA:1.10.3720.10 84 284 5.4E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu5429 f2a173d517e8c78bef170f908d622911 55 Pfam PF03466 LysR substrate binding domain 5 50 6.9E-8 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5429 f2a173d517e8c78bef170f908d622911 55 SUPERFAMILY SSF53850 4 52 6.7E-7 T 14-10-2018 Atu5429 f2a173d517e8c78bef170f908d622911 55 Gene3D G3DSA:3.40.190.290 1 52 2.1E-10 T 14-10-2018 Atu0777 91f93a4aa5e0d12e1b27e7ca4ce7f7ae 102 Pfam PF07876 Stress responsive A/B Barrel Domain 2 102 1.8E-24 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel Atu0777 91f93a4aa5e0d12e1b27e7ca4ce7f7ae 102 SMART SM00886 2 102 2.2E-26 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel Atu0777 91f93a4aa5e0d12e1b27e7ca4ce7f7ae 102 SUPERFAMILY SSF54909 2 99 6.97E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0777 91f93a4aa5e0d12e1b27e7ca4ce7f7ae 102 Gene3D G3DSA:3.30.70.100 1 102 5.1E-27 T 14-10-2018 Atu5435 84de31864704f0bfc3b1b5bf7ec0afb6 390 SUPERFAMILY SSF51735 5 172 1.79E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5435 84de31864704f0bfc3b1b5bf7ec0afb6 390 Gene3D G3DSA:3.40.50.720 17 362 6.3E-126 T 14-10-2018 Atu5435 84de31864704f0bfc3b1b5bf7ec0afb6 390 SUPERFAMILY SSF55347 150 327 1.5E-29 T 14-10-2018 Atu5435 84de31864704f0bfc3b1b5bf7ec0afb6 390 Gene3D G3DSA:3.30.360.10 147 387 6.3E-126 T 14-10-2018 Atu5435 84de31864704f0bfc3b1b5bf7ec0afb6 390 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 277 3.0E-12 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu5435 84de31864704f0bfc3b1b5bf7ec0afb6 390 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 1.3E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu2552 66c8df6364c7c550cb6f2f0328529a52 484 SUPERFAMILY SSF56954 3 461 7.46E-106 T 14-10-2018 Atu2552 66c8df6364c7c550cb6f2f0328529a52 484 Pfam PF02321 Outer membrane efflux protein 280 458 4.4E-32 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atu2552 66c8df6364c7c550cb6f2f0328529a52 484 Pfam PF02321 Outer membrane efflux protein 63 248 7.4E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Atu2552 66c8df6364c7c550cb6f2f0328529a52 484 Gene3D G3DSA:2.20.200.10 97 349 4.8E-119 T 14-10-2018 Atu2552 66c8df6364c7c550cb6f2f0328529a52 484 Gene3D G3DSA:1.20.1600.10 50 460 4.8E-119 T 14-10-2018 Atu2552 66c8df6364c7c550cb6f2f0328529a52 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 460 2.2E-129 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Atu0731 c0a18f0531ea48beab47233d659dcc72 331 SUPERFAMILY SSF143865 8 264 8.63E-37 T 14-10-2018 Atu0731 c0a18f0531ea48beab47233d659dcc72 331 Gene3D G3DSA:3.30.460.20 4 140 3.0E-29 T 14-10-2018 Atu0731 c0a18f0531ea48beab47233d659dcc72 331 Gene3D G3DSA:1.20.58.340 274 331 6.4E-7 T 14-10-2018 Atu0731 c0a18f0531ea48beab47233d659dcc72 331 SUPERFAMILY SSF144083 266 328 8.11E-13 T 14-10-2018 Atu0731 c0a18f0531ea48beab47233d659dcc72 331 Gene3D G3DSA:1.20.58.340 146 270 2.3E-7 T 14-10-2018 Atu0731 c0a18f0531ea48beab47233d659dcc72 331 Pfam PF01544 CorA-like Mg2+ transporter protein 40 327 8.7E-64 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Atu1014 8cd2a2de5048fad736e5169c9e0e4b98 266 SUPERFAMILY SSF51621 2 254 6.28E-79 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu1014 8cd2a2de5048fad736e5169c9e0e4b98 266 Gene3D G3DSA:3.20.20.60 2 258 2.1E-85 T 14-10-2018 Atu1014 8cd2a2de5048fad736e5169c9e0e4b98 266 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 244 1.0E-57 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 Gene3D G3DSA:3.40.50.300 15 293 5.0E-86 T 14-10-2018 Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 11 298 26.566 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 SUPERFAMILY SSF52540 11 227 1.5E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 SUPERFAMILY SSF52540 12 156 2.57E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 Pfam PF01715 IPP transferase 44 289 1.9E-67 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 11 293 7.2E-77 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Atu2039 2cfd1929e3895d54d29275083cde1d3e 298 Gene3D G3DSA:1.10.20.140 118 189 5.0E-86 T 14-10-2018 Atu0096 d94f684722426df1388178ba730ed249 624 Pfam PF13177 DNA polymerase III, delta subunit 36 198 6.5E-34 T 14-10-2018 Atu0096 d94f684722426df1388178ba730ed249 624 Gene3D G3DSA:1.20.272.10 262 381 3.2E-11 T 14-10-2018 Atu0096 d94f684722426df1388178ba730ed249 624 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 18 378 1.0E-121 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Atu0096 d94f684722426df1388178ba730ed249 624 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 478 590 1.3E-36 T 14-10-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal Atu0096 d94f684722426df1388178ba730ed249 624 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 252 394 1.5E-52 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Atu0096 d94f684722426df1388178ba730ed249 624 Gene3D G3DSA:1.10.8.60 23 259 3.2E-98 T 14-10-2018 Atu0096 d94f684722426df1388178ba730ed249 624 SMART SM00382 53 199 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0096 d94f684722426df1388178ba730ed249 624 Gene3D G3DSA:3.40.50.300 28 197 3.2E-98 T 14-10-2018 Atu0096 d94f684722426df1388178ba730ed249 624 SUPERFAMILY SSF48019 263 388 2.55E-30 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Atu0096 d94f684722426df1388178ba730ed249 624 SUPERFAMILY SSF52540 48 241 1.08E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2661 7ab0da7bf5022253e4093ceb874e12a9 177 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 38.116 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atu2661 7ab0da7bf5022253e4093ceb874e12a9 177 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atu2661 7ab0da7bf5022253e4093ceb874e12a9 177 Gene3D G3DSA:3.90.80.10 1 176 5.4E-74 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atu2661 7ab0da7bf5022253e4093ceb874e12a9 177 Pfam PF00719 Inorganic pyrophosphatase 18 174 3.2E-55 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atu2661 7ab0da7bf5022253e4093ceb874e12a9 177 SUPERFAMILY SSF50324 4 174 5.76E-69 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Atu3707 d21b2eff46f2b068a42265a2aba6f953 392 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 10 382 1.2E-208 T 14-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 Atu3707 d21b2eff46f2b068a42265a2aba6f953 392 Pfam PF00266 Aminotransferase class-V 140 317 1.4E-5 T 14-10-2018 IPR000192 Aminotransferase class V domain Atu3707 d21b2eff46f2b068a42265a2aba6f953 392 Gene3D G3DSA:3.90.1150.10 268 382 1.9E-15 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3707 d21b2eff46f2b068a42265a2aba6f953 392 Gene3D G3DSA:3.40.640.10 32 267 3.2E-41 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3707 d21b2eff46f2b068a42265a2aba6f953 392 SUPERFAMILY SSF53383 13 381 2.5E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3707 d21b2eff46f2b068a42265a2aba6f953 392 PIRSF PIRSF000525 11 384 7.0E-58 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Atu4475 a5578a5a6424252807842e41044f3251 590 Pfam PF03600 Citrate transporter 17 536 1.3E-46 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Atu4475 a5578a5a6424252807842e41044f3251 590 Pfam PF02080 TrkA-C domain 220 285 1.9E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atu4475 a5578a5a6424252807842e41044f3251 590 Pfam PF02080 TrkA-C domain 310 379 2.0E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Atu4475 a5578a5a6424252807842e41044f3251 590 Gene3D G3DSA:3.30.70.1450 308 380 7.6E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu4475 a5578a5a6424252807842e41044f3251 590 Gene3D G3DSA:3.30.70.1450 216 290 1.5E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu4475 a5578a5a6424252807842e41044f3251 590 SUPERFAMILY SSF116726 306 385 2.88E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu4475 a5578a5a6424252807842e41044f3251 590 SUPERFAMILY SSF116726 212 288 5.36E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Atu0363 a1fda4e4cd1a7731536783b1314801a9 232 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 58 221 7.5E-35 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Atu0363 a1fda4e4cd1a7731536783b1314801a9 232 Gene3D G3DSA:3.40.50.150 23 232 2.1E-51 T 14-10-2018 Atu0363 a1fda4e4cd1a7731536783b1314801a9 232 SUPERFAMILY SSF53335 61 230 3.08E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0363 a1fda4e4cd1a7731536783b1314801a9 232 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 15 232 26.941 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Atu0363 a1fda4e4cd1a7731536783b1314801a9 232 Pfam PF02390 Putative methyltransferase 59 223 5.7E-39 T 14-10-2018 Atu1983 ddf0d4993ee2ba093d4c92f145e7acc1 236 Pfam PF10099 Anti-sigma-K factor rskA 67 231 1.5E-26 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 Gene3D G3DSA:3.90.1280.10 277 329 1.6E-12 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 Gene3D G3DSA:3.55.30.10 12 204 6.0E-58 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 Gene3D G3DSA:1.10.287.480 225 276 9.5E-10 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 SUPERFAMILY SSF64397 16 284 1.27E-66 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 SUPERFAMILY SSF118352 276 328 2.49E-13 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 PIRSF PIRSF005261 8 329 2.3E-72 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Atu0430 cb03bbb5efdaba1e5ecf97cc696cbcea 329 Pfam PF01430 Hsp33 protein 17 322 2.8E-76 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Atu3054 327361ff6355b8899d53f866aa4b3533 389 PIRSF PIRSF028431 1 385 8.3E-148 T 14-10-2018 IPR016883 Uncharacterised conserved protein UCP028431 Atu3054 327361ff6355b8899d53f866aa4b3533 389 Gene3D G3DSA:1.50.10.140 2 375 3.9E-124 T 14-10-2018 Atu3054 327361ff6355b8899d53f866aa4b3533 389 Pfam PF10091 Putative glucoamylase 148 356 4.3E-57 T 14-10-2018 IPR019282 Domain of unknown function DUF2329 Atu4212 0711e0cca96785a610f61caea2cad377 248 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 116 1.6E-22 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Atu4212 0711e0cca96785a610f61caea2cad377 248 Gene3D G3DSA:3.20.20.190 1 248 4.9E-98 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu4212 0711e0cca96785a610f61caea2cad377 248 SUPERFAMILY SSF51695 2 233 1.88E-55 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu1736 790373034df86fe4414c18a17f906826 456 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 43 455 39.382 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 130 156 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 235 258 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 339 358 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 399 418 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 183 204 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 158 177 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 PRINTS PR00447 Natural resistance-associated macrophage protein signature 367 384 4.1E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 Pfam PF01566 Natural resistance-associated macrophage protein 71 427 3.5E-133 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu1736 790373034df86fe4414c18a17f906826 456 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 423 2.9E-118 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu4807 f2d298967ce44b4ffcadf445b88782fb 503 Pfam PF13440 Polysaccharide biosynthesis protein 28 320 4.4E-46 T 14-10-2018 Atu0208 8a704bcf2bf5f8b970d453fe32a423e8 278 SUPERFAMILY SSF103481 18 118 6.41E-13 T 14-10-2018 Atu0208 8a704bcf2bf5f8b970d453fe32a423e8 278 SUPERFAMILY SSF103481 164 260 8.24E-12 T 14-10-2018 Atu0208 8a704bcf2bf5f8b970d453fe32a423e8 278 Pfam PF00892 EamA-like transporter family 2 114 8.9E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0208 8a704bcf2bf5f8b970d453fe32a423e8 278 Pfam PF00892 EamA-like transporter family 125 257 5.6E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 SUPERFAMILY SSF48179 201 294 3.06E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 7.6E-66 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 Gene3D G3DSA:3.40.50.720 232 441 2.7E-77 T 14-10-2018 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 SUPERFAMILY SSF52413 302 428 3.53E-39 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 Gene3D G3DSA:1.20.5.100 200 231 3.4E-18 T 14-10-2018 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 SUPERFAMILY SSF51735 1 188 7.89E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 Gene3D G3DSA:3.40.50.720 1 199 1.8E-82 T 14-10-2018 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 417 8.4E-32 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 293 7.6E-37 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 PIRSF PIRSF000124 1 433 5.2E-141 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 1.1E-136 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 PIRSF PIRSF500134 1 436 2.3E-181 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Atu4149 765f72137f85de18f2fa6312e8bef8a7 443 SMART SM00984 317 418 8.9E-50 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Atu2245 c71a13ca6292324aeadfc61d6299f427 550 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 71 521 1.1E-113 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Atu2245 c71a13ca6292324aeadfc61d6299f427 550 Pfam PF02690 Na+/Pi-cotransporter 16 150 7.4E-31 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Atu2245 c71a13ca6292324aeadfc61d6299f427 550 Pfam PF01895 PhoU domain 446 528 2.8E-8 T 14-10-2018 IPR026022 PhoU domain Atu2245 c71a13ca6292324aeadfc61d6299f427 550 Pfam PF01895 PhoU domain 341 420 8.2E-8 T 14-10-2018 IPR026022 PhoU domain Atu2245 c71a13ca6292324aeadfc61d6299f427 550 Gene3D G3DSA:1.20.58.220 441 535 9.2E-10 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu2245 c71a13ca6292324aeadfc61d6299f427 550 Gene3D G3DSA:1.20.58.220 333 432 3.7E-10 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu2245 c71a13ca6292324aeadfc61d6299f427 550 SUPERFAMILY SSF109755 328 532 4.6E-35 T 14-10-2018 Atu0093 e68955fe251d33d71b15fca8f276f200 201 TIGRFAM TIGR00615 recR: recombination protein RecR 8 198 7.3E-63 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Atu0093 e68955fe251d33d71b15fca8f276f200 201 SMART SM00493 83 168 3.8E-7 T 14-10-2018 IPR006171 TOPRIM domain Atu0093 e68955fe251d33d71b15fca8f276f200 201 SUPERFAMILY SSF111304 8 201 2.09E-69 T 14-10-2018 IPR023627 Recombination protein RecR Atu0093 e68955fe251d33d71b15fca8f276f200 201 Pfam PF13662 Toprim domain 83 174 5.7E-25 T 14-10-2018 IPR006171 TOPRIM domain Atu0093 e68955fe251d33d71b15fca8f276f200 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 201 93.54 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Atu0093 e68955fe251d33d71b15fca8f276f200 201 Pfam PF02132 RecR protein 45 81 4.3E-12 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Atu0093 e68955fe251d33d71b15fca8f276f200 201 Gene3D G3DSA:3.40.1360.10 80 201 1.8E-41 T 14-10-2018 Atu0093 e68955fe251d33d71b15fca8f276f200 201 Gene3D G3DSA:1.10.8.420 6 55 7.1E-10 T 14-10-2018 Atu0093 e68955fe251d33d71b15fca8f276f200 201 ProSitePatterns PS01300 RecR protein signature. 60 81 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Atu4726 343c64ccedfc28569e2216df302bc662 231 Gene3D G3DSA:1.10.287.990 50 118 3.9E-17 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 PRINTS PR01703 Manganese superoxide dismutase signature 36 47 2.1E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 PRINTS PR01703 Manganese superoxide dismutase signature 57 70 2.1E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 PRINTS PR01703 Manganese superoxide dismutase signature 102 115 2.1E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 PRINTS PR01703 Manganese superoxide dismutase signature 155 163 2.1E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 PRINTS PR01703 Manganese superoxide dismutase signature 192 204 2.1E-17 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 PIRSF PIRSF000349 5 231 6.3E-63 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 Gene3D G3DSA:2.40.500.20 119 231 7.2E-31 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 SUPERFAMILY SSF46609 25 120 4.45E-26 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 SUPERFAMILY SSF54719 121 230 4.06E-33 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 126 228 1.3E-28 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 194 201 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu4726 343c64ccedfc28569e2216df302bc662 231 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 36 117 9.3E-20 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 Hamap MF_01987 Ribokinase [rbsK]. 1 295 20.319 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 Pfam PF00294 pfkB family carbohydrate kinase 28 287 5.7E-42 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 SUPERFAMILY SSF53613 1 296 4.37E-59 T 14-10-2018 IPR029056 Ribokinase-like Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 Gene3D G3DSA:3.40.1190.20 2 298 4.4E-76 T 14-10-2018 IPR029056 Ribokinase-like Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 PRINTS PR00990 Ribokinase signature 5 26 9.8E-19 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 PRINTS PR00990 Ribokinase signature 171 186 9.8E-19 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 PRINTS PR00990 Ribokinase signature 209 220 9.8E-19 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 PRINTS PR00990 Ribokinase signature 32 51 9.8E-19 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu3068 7cbb946f137d2110a922694ef0ddd68f 298 PRINTS PR00990 Ribokinase signature 103 116 9.8E-19 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Atu2232 5e8419b9eebccac139768b1b34f1f109 103 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 97 22.329 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Atu2232 5e8419b9eebccac139768b1b34f1f109 103 Gene3D G3DSA:3.30.1390.10 3 103 7.1E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atu2232 5e8419b9eebccac139768b1b34f1f109 103 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 98 1.3E-24 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Atu2232 5e8419b9eebccac139768b1b34f1f109 103 SUPERFAMILY SSF54736 17 101 7.32E-25 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Atu0211 ffa85714cdedb8e1a4c6e91bc2237439 283 SUPERFAMILY SSF54001 161 280 3.27E-31 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu0211 ffa85714cdedb8e1a4c6e91bc2237439 283 Gene3D G3DSA:2.30.30.40 30 93 3.2E-6 T 14-10-2018 Atu0211 ffa85714cdedb8e1a4c6e91bc2237439 283 Pfam PF00877 NlpC/P60 family 176 258 2.7E-16 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Atu0211 ffa85714cdedb8e1a4c6e91bc2237439 283 Gene3D G3DSA:3.90.1720.10 150 268 2.2E-23 T 14-10-2018 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 SUPERFAMILY SSF52374 21 180 2.64E-32 T 14-10-2018 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 311 2.2E-74 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 50 4.5E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 SUPERFAMILY SSF82114 178 316 3.49E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 Pfam PF01687 Riboflavin kinase 188 311 5.8E-32 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 Gene3D G3DSA:2.40.30.30 192 318 6.3E-37 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 Pfam PF06574 FAD synthetase 15 170 1.0E-51 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 Gene3D G3DSA:3.40.50.620 5 190 2.3E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 PIRSF PIRSF004491 1 316 4.3E-90 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Atu0685 fd55711c19cc77acf48e8dd6c0ba3136 326 SMART SM00904 187 312 2.9E-51 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Atu4251 26ceac81d07d891032fae697281f782b 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 300 7.3E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4251 26ceac81d07d891032fae697281f782b 308 SUPERFAMILY SSF161098 70 295 2.09E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu4251 26ceac81d07d891032fae697281f782b 308 Gene3D G3DSA:1.10.3720.10 65 304 2.3E-65 T 14-10-2018 IPR035906 MetI-like superfamily Atu5074 0338b9dc1dec1bf1f5a96b2a2f067919 373 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 167 195 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atu5074 0338b9dc1dec1bf1f5a96b2a2f067919 373 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 365 8.7E-91 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Atu5074 0338b9dc1dec1bf1f5a96b2a2f067919 373 Gene3D G3DSA:1.20.1090.10 180 373 5.6E-54 T 14-10-2018 Atu5074 0338b9dc1dec1bf1f5a96b2a2f067919 373 Gene3D G3DSA:3.40.50.1970 2 178 1.6E-37 T 14-10-2018 Atu5074 0338b9dc1dec1bf1f5a96b2a2f067919 373 SUPERFAMILY SSF56796 7 371 1.83E-95 T 14-10-2018 Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 Pfam PF01381 Helix-turn-helix 24 76 3.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 SUPERFAMILY SSF51182 86 198 3.82E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 Gene3D G3DSA:1.10.260.40 12 88 1.2E-18 T 14-10-2018 Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 SMART SM00530 23 78 1.1E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 Pfam PF07883 Cupin domain 138 197 6.7E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 SUPERFAMILY SSF47413 15 85 6.17E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4226 bbc878f4d13d172707b38592e2d5f25a 208 Gene3D G3DSA:2.60.120.10 89 198 2.4E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1648 eb6228027e386d2c02d257c086aeddef 327 SMART SM00922 131 222 1.4E-14 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu1648 eb6228027e386d2c02d257c086aeddef 327 SUPERFAMILY SSF51604 119 327 4.19E-53 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu1648 eb6228027e386d2c02d257c086aeddef 327 Gene3D G3DSA:3.30.390.10 1 105 1.0E-31 T 14-10-2018 IPR029017 Enolase-like, N-terminal Atu1648 eb6228027e386d2c02d257c086aeddef 327 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 105 7.5E-11 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu1648 eb6228027e386d2c02d257c086aeddef 327 Pfam PF13378 Enolase C-terminal domain-like 139 292 1.9E-23 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu1648 eb6228027e386d2c02d257c086aeddef 327 SUPERFAMILY SSF54826 6 110 1.87E-28 T 14-10-2018 Atu1648 eb6228027e386d2c02d257c086aeddef 327 Gene3D G3DSA:3.20.20.120 106 327 5.6E-65 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu4668 de47e9d173562ec43815bb0e65a66d3d 372 Pfam PF12698 ABC-2 family transporter protein 26 364 1.5E-31 T 14-10-2018 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Gene3D G3DSA:3.30.70.270 70 114 1.2E-11 T 14-10-2018 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 355 38.968 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Gene3D G3DSA:2.30.40.20 11 69 1.3E-28 T 14-10-2018 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Gene3D G3DSA:1.10.150.20 175 228 1.1E-14 T 14-10-2018 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Pfam PF00817 impB/mucB/samB family 7 153 1.3E-50 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 SUPERFAMILY SSF56672 1 233 1.33E-92 T 14-10-2018 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Gene3D G3DSA:3.30.1490.100 239 348 1.7E-27 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Gene3D G3DSA:3.30.70.270 115 174 1.2E-21 T 14-10-2018 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 233 346 2.6E-20 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu5469 3030af798ab76cb3b8a903ed7664f21c 357 SUPERFAMILY SSF100879 237 337 1.22E-27 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 SUPERFAMILY SSF50331 236 357 6.07E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 Gene3D G3DSA:3.40.50.300 3 221 1.0E-67 T 14-10-2018 Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 Pfam PF00005 ABC transporter 20 161 2.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 SUPERFAMILY SSF52540 4 242 1.12E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 SMART SM00382 28 211 6.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 Gene3D G3DSA:2.40.50.940 222 350 2.7E-29 T 14-10-2018 Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 Gene3D G3DSA:2.40.50.140 286 341 2.7E-29 T 14-10-2018 Atu3236 0bd527a8b5ffb58fa759be2f93cf0788 357 Pfam PF08402 TOBE domain 280 349 2.6E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu4629 89d301721f96b9cdef682bab553396d6 297 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 53 239 0.008 T 14-10-2018 Atu4629 89d301721f96b9cdef682bab553396d6 297 SUPERFAMILY SSF51735 52 294 7.22E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 221 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 141 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 190 1.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 62 293 1.7E-54 T 14-10-2018 Atu4629 89d301721f96b9cdef682bab553396d6 297 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 189 217 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu4629 89d301721f96b9cdef682bab553396d6 297 Gene3D G3DSA:3.40.50.720 6 295 1.1E-81 T 14-10-2018 Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 71 8.4E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 258 278 8.4E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 192 8.4E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 141 8.4E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 221 8.4E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4629 89d301721f96b9cdef682bab553396d6 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 240 8.4E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2469 9dd8c29a440be9de71a898d5bd76f21d 314 SUPERFAMILY SSF53850 26 274 3.33E-11 T 14-10-2018 Atu2469 9dd8c29a440be9de71a898d5bd76f21d 314 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 40 309 9.6E-31 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu2469 9dd8c29a440be9de71a898d5bd76f21d 314 Gene3D G3DSA:3.40.190.10 116 240 1.0E-72 T 14-10-2018 Atu2469 9dd8c29a440be9de71a898d5bd76f21d 314 PIRSF PIRSF017082 14 314 7.4E-106 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Atu2469 9dd8c29a440be9de71a898d5bd76f21d 314 Gene3D G3DSA:3.40.190.150 24 305 1.0E-72 T 14-10-2018 Atu1975 532cb102c8346a718194e1be02196f38 262 Pfam PF06966 Protein of unknown function (DUF1295) 19 248 1.9E-80 T 14-10-2018 IPR010721 Protein of unknown function DUF1295 Atu1975 532cb102c8346a718194e1be02196f38 262 Gene3D G3DSA:1.20.120.1630 58 254 2.7E-13 T 14-10-2018 Atu5261 9ca645ba44a3b530dfe2cb2d473ac11b 549 Pfam PF07519 Tannase and feruloyl esterase 77 547 1.2E-176 T 14-10-2018 IPR011118 Tannase/feruloyl esterase MetaCyc: PWY-6784 Atu5261 9ca645ba44a3b530dfe2cb2d473ac11b 549 SUPERFAMILY SSF53474 137 495 9.02E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1138 845023564c3903adac20dfb0e7ddd32c 118 Gene3D G3DSA:2.40.128.90 1 118 5.5E-25 T 14-10-2018 Atu1138 845023564c3903adac20dfb0e7ddd32c 118 SUPERFAMILY SSF69917 2 118 5.75E-30 T 14-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 Atu1138 845023564c3903adac20dfb0e7ddd32c 118 Pfam PF01278 Omptin family 1 118 1.3E-20 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Atu3483 abe0ca113053b34534b47e595cd611be 279 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.199 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atu3483 abe0ca113053b34534b47e595cd611be 279 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 10 270 9.0E-92 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atu3483 abe0ca113053b34534b47e595cd611be 279 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 1.6E-103 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atu3483 abe0ca113053b34534b47e595cd611be 279 PIRSF PIRSF000388 1 272 2.1E-104 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Atu3483 abe0ca113053b34534b47e595cd611be 279 Gene3D G3DSA:3.20.20.60 7 276 3.0E-101 T 14-10-2018 Atu3483 abe0ca113053b34534b47e595cd611be 279 SUPERFAMILY SSF51621 9 269 2.24E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu2241 65269fc5333943211ecc50d372285852 627 Gene3D G3DSA:1.20.1560.10 11 352 7.9E-32 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2241 65269fc5333943211ecc50d372285852 627 SMART SM00382 395 586 4.2E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2241 65269fc5333943211ecc50d372285852 627 SUPERFAMILY SSF52540 360 610 3.26E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2241 65269fc5333943211ecc50d372285852 627 SUPERFAMILY SSF90123 33 351 9.55E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2241 65269fc5333943211ecc50d372285852 627 Pfam PF00005 ABC transporter 387 540 6.3E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2241 65269fc5333943211ecc50d372285852 627 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2241 65269fc5333943211ecc50d372285852 627 Gene3D G3DSA:3.40.50.300 360 623 2.6E-90 T 14-10-2018 Atu2241 65269fc5333943211ecc50d372285852 627 Pfam PF00664 ABC transporter transmembrane region 46 317 2.7E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu4645 528b58827e78afb8696ae2ab33ccbc64 483 Gene3D G3DSA:3.40.605.10 1 258 1.8E-71 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4645 528b58827e78afb8696ae2ab33ccbc64 483 Pfam PF00171 Aldehyde dehydrogenase family 16 472 1.7E-142 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4645 528b58827e78afb8696ae2ab33ccbc64 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu4645 528b58827e78afb8696ae2ab33ccbc64 483 SUPERFAMILY SSF53720 2 480 4.19E-146 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4645 528b58827e78afb8696ae2ab33ccbc64 483 Gene3D G3DSA:3.40.309.10 259 482 6.0E-75 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu1604 99dce4886d5811278dc2f7ee84a7cf3e 619 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 133 304 3.0E-73 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 Atu1604 99dce4886d5811278dc2f7ee84a7cf3e 619 SUPERFAMILY SSF53474 262 553 1.8E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1604 99dce4886d5811278dc2f7ee84a7cf3e 619 Gene3D G3DSA:3.40.50.1820 261 535 6.8E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1604 99dce4886d5811278dc2f7ee84a7cf3e 619 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 84 618 6.5E-210 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 Atu2203 d7a621f8c3be8f8db37901a5fd9c1999 199 Gene3D G3DSA:2.30.30.40 25 85 4.7E-10 T 14-10-2018 Atu2203 d7a621f8c3be8f8db37901a5fd9c1999 199 Pfam PF08239 Bacterial SH3 domain 33 83 2.9E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Atu2203 d7a621f8c3be8f8db37901a5fd9c1999 199 Pfam PF06823 Protein of unknown function (DUF1236) 140 199 7.1E-18 T 14-10-2018 IPR009642 Protein of unknown function DUF1236 Atu5164 0ca19f9f8d344de64dfd9928e4fbac57 113 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 9 92 6.3E-29 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Atu0574 b84d30162729f10cacb3de7d22c5677c 425 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 406 2.2E-97 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atu0574 b84d30162729f10cacb3de7d22c5677c 425 Pfam PF00460 Flagella basal body rod protein 7 37 2.8E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atu0574 b84d30162729f10cacb3de7d22c5677c 425 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Atu0574 b84d30162729f10cacb3de7d22c5677c 425 Pfam PF07559 Flagellar basal body protein FlaE 187 304 1.9E-11 T 14-10-2018 IPR011491 Flagellar hook protein FlgE Atu0574 b84d30162729f10cacb3de7d22c5677c 425 Gene3D G3DSA:2.60.98.20 156 306 1.7E-14 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Atu0574 b84d30162729f10cacb3de7d22c5677c 425 SUPERFAMILY SSF117143 80 385 8.11E-67 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Atu0574 b84d30162729f10cacb3de7d22c5677c 425 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 347 423 8.1E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atu5233 cf85200b6f8f5fd857e14af33b6a42f4 423 Gene3D G3DSA:2.40.37.20 27 422 3.6E-108 T 14-10-2018 Atu5233 cf85200b6f8f5fd857e14af33b6a42f4 423 Pfam PF14031 Putative serine dehydratase domain 310 406 3.7E-16 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Atu5233 cf85200b6f8f5fd857e14af33b6a42f4 423 SMART SM01119 310 409 1.5E-33 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Atu5233 cf85200b6f8f5fd857e14af33b6a42f4 423 SUPERFAMILY SSF51419 40 253 3.27E-19 T 14-10-2018 IPR029066 PLP-binding barrel Atu5233 cf85200b6f8f5fd857e14af33b6a42f4 423 Gene3D G3DSA:3.20.20.10 43 279 3.6E-108 T 14-10-2018 IPR029066 PLP-binding barrel Atu5233 cf85200b6f8f5fd857e14af33b6a42f4 423 Pfam PF01168 Alanine racemase, N-terminal domain 40 244 2.5E-9 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu0405 af51a2dcae2ad1232927f8aa264e27ef 570 SUPERFAMILY SSF56801 13 569 5.1E-150 T 14-10-2018 Atu0405 af51a2dcae2ad1232927f8aa264e27ef 570 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 560 1.7E-19 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Atu0405 af51a2dcae2ad1232927f8aa264e27ef 570 Pfam PF00501 AMP-binding enzyme 42 477 2.2E-107 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu0405 af51a2dcae2ad1232927f8aa264e27ef 570 Gene3D G3DSA:3.30.300.310 474 570 5.2E-31 T 14-10-2018 Atu0405 af51a2dcae2ad1232927f8aa264e27ef 570 Gene3D G3DSA:3.40.50.12780 26 473 7.0E-117 T 14-10-2018 Atu0405 af51a2dcae2ad1232927f8aa264e27ef 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu4696 04ae5c0810e521b0665a1e243e97061b 322 SUPERFAMILY SSF161098 89 305 1.09E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu4696 04ae5c0810e521b0665a1e243e97061b 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 1.6E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4696 04ae5c0810e521b0665a1e243e97061b 322 Gene3D G3DSA:1.10.3720.10 84 313 4.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 SUPERFAMILY SSF46946 2 121 1.61E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 Gene3D G3DSA:4.10.910.10 73 118 8.3E-27 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 5.1E-54 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.3E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 PIRSF PIRSF002134 1 122 4.7E-45 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.207 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1925 b53b1c40f4e29e52ef166bf027a5c5cb 122 Gene3D G3DSA:1.10.8.50 1 72 8.0E-28 T 14-10-2018 Atu2197 04cb07e13e05081f1f7232d1c1f9f2ad 308 SUPERFAMILY SSF141868 26 256 7.45E-39 T 14-10-2018 IPR035919 EAL domain superfamily Atu2197 04cb07e13e05081f1f7232d1c1f9f2ad 308 Pfam PF00563 EAL domain 23 252 8.4E-29 T 14-10-2018 IPR001633 EAL domain Atu2197 04cb07e13e05081f1f7232d1c1f9f2ad 308 SMART SM00052 10 257 2.8E-7 T 14-10-2018 IPR001633 EAL domain Atu2197 04cb07e13e05081f1f7232d1c1f9f2ad 308 Gene3D G3DSA:3.20.20.450 17 262 5.7E-40 T 14-10-2018 IPR035919 EAL domain superfamily Atu4448 f8e45123c0a6a36cbba1bd67ee64663d 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 149 336 9.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4448 f8e45123c0a6a36cbba1bd67ee64663d 338 SUPERFAMILY SSF161098 103 326 8.37E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu4448 f8e45123c0a6a36cbba1bd67ee64663d 338 Gene3D G3DSA:1.10.3720.10 97 335 1.9E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu3241 6c3fb92724013ce265bbebfd81f77e04 366 SUPERFAMILY SSF51735 3 152 1.29E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3241 6c3fb92724013ce265bbebfd81f77e04 366 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 117 7.6E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3241 6c3fb92724013ce265bbebfd81f77e04 366 Gene3D G3DSA:3.40.50.720 1 124 2.8E-27 T 14-10-2018 Atu3241 6c3fb92724013ce265bbebfd81f77e04 366 SUPERFAMILY SSF55347 129 294 8.18E-31 T 14-10-2018 Atu3241 6c3fb92724013ce265bbebfd81f77e04 366 Gene3D G3DSA:3.30.360.10 128 345 1.1E-36 T 14-10-2018 Atu3534 9aa3e57c2372205e2415bf4e7ac032e0 346 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 330 4.1E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu2617 95210c3b2f000f5148f6f451d13e296b 159 Pfam PF01584 CheW-like domain 17 150 4.9E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atu2617 95210c3b2f000f5148f6f451d13e296b 159 Gene3D G3DSA:2.30.30.40 19 143 4.1E-37 T 14-10-2018 Atu2617 95210c3b2f000f5148f6f451d13e296b 159 Gene3D G3DSA:2.40.50.180 35 144 4.1E-37 T 14-10-2018 Atu2617 95210c3b2f000f5148f6f451d13e296b 159 SUPERFAMILY SSF50341 10 151 1.44E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atu2617 95210c3b2f000f5148f6f451d13e296b 159 SMART SM00260 12 149 8.3E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atu2758 6cd74fb8c3cbeb28cf74687555f3119f 401 Gene3D G3DSA:1.10.3430.10 1 401 4.0E-130 T 14-10-2018 IPR029020 Ammonium/urea transporter Atu2758 6cd74fb8c3cbeb28cf74687555f3119f 401 SUPERFAMILY SSF111352 1 380 3.01E-121 T 14-10-2018 Atu2758 6cd74fb8c3cbeb28cf74687555f3119f 401 Pfam PF00909 Ammonium Transporter Family 1 399 4.3E-112 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Atu2758 6cd74fb8c3cbeb28cf74687555f3119f 401 TIGRFAM TIGR00836 amt: ammonium transporter 1 399 5.0E-124 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Atu2758 6cd74fb8c3cbeb28cf74687555f3119f 401 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Atu5362 b6d8a396f45e2b4a520506005e1729c2 243 Pfam PF11064 Protein of unknown function (DUF2865) 89 201 1.1E-29 T 14-10-2018 IPR021293 Protein of unknown function DUF2865 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 SUPERFAMILY SSF46977 420 495 1.7E-14 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 Gene3D G3DSA:1.20.58.100 405 502 3.2E-12 T 14-10-2018 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 Gene3D G3DSA:3.90.700.10 236 343 9.6E-131 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 340 362 7.7E-6 T 14-10-2018 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.7E-6 T 14-10-2018 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 12 484 6.0E-144 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 SUPERFAMILY SSF56425 226 337 2.54E-34 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 Gene3D G3DSA:3.50.50.60 12 389 9.6E-131 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 Pfam PF02910 Fumarate reductase flavoprotein C-term 461 497 4.6E-6 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 Pfam PF00890 FAD binding domain 12 377 1.7E-81 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu4097 d5765f7c4b84ccae8150c62571dda05e 522 SUPERFAMILY SSF51905 12 397 2.95E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0509 30b62567539dc3f58d4047e150e36e17 161 Pfam PF01899 Na+/H+ ion antiporter subunit 12 159 6.7E-36 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Atu0509 30b62567539dc3f58d4047e150e36e17 161 PIRSF PIRSF019239 1 161 6.9E-33 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Atu1346 34248ec0f296f51546339d8e9fb1d62f 305 Pfam PF02567 Phenazine biosynthesis-like protein 8 301 4.8E-59 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu1346 34248ec0f296f51546339d8e9fb1d62f 305 Gene3D G3DSA:3.10.310.10 8 128 2.8E-76 T 14-10-2018 Atu1346 34248ec0f296f51546339d8e9fb1d62f 305 PIRSF PIRSF016184 1 305 4.5E-81 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu1346 34248ec0f296f51546339d8e9fb1d62f 305 SUPERFAMILY SSF54506 3 304 2.44E-64 T 14-10-2018 Atu1346 34248ec0f296f51546339d8e9fb1d62f 305 Gene3D G3DSA:3.10.310.10 129 293 2.8E-76 T 14-10-2018 Atu1346 34248ec0f296f51546339d8e9fb1d62f 305 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 7 303 3.7E-60 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu2621 a5ba1b6bbb90cf53440160c456a53e12 136 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 89 8.0E-40 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2621 a5ba1b6bbb90cf53440160c456a53e12 136 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 2.8E-23 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2621 a5ba1b6bbb90cf53440160c456a53e12 136 SUPERFAMILY SSF51344 4 85 5.89E-22 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2621 a5ba1b6bbb90cf53440160c456a53e12 136 Gene3D G3DSA:2.60.15.10 1 131 2.6E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2621 a5ba1b6bbb90cf53440160c456a53e12 136 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 135 17.12 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2621 a5ba1b6bbb90cf53440160c456a53e12 136 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 125 5.7E-26 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 SMART SM00932 3 88 4.4E-51 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 Gene3D G3DSA:3.30.1370.70 1 94 1.9E-36 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 Pfam PF01106 NifU-like domain 119 185 1.6E-27 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 PIRSF PIRSF036773 1 187 2.7E-74 T 14-10-2018 IPR035433 NFU1-like Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 SUPERFAMILY SSF117916 105 187 8.94E-27 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 5.0E-32 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 SUPERFAMILY SSF110836 1 90 1.7E-31 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 Gene3D G3DSA:3.30.300.130 112 187 7.9E-29 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atu0351 8fe89e51cb2847de8122ab2b33f0bcbb 187 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 123 187 1.0E-32 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Atu2018 2a32b992a8e3aa7284253c31f5a864de 84 Gene3D G3DSA:1.10.1220.170 41 84 4.6E-11 T 14-10-2018 Atu2018 2a32b992a8e3aa7284253c31f5a864de 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 4.9E-22 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Atu2018 2a32b992a8e3aa7284253c31f5a864de 84 Gene3D G3DSA:3.40.1620.10 1 40 2.1E-10 T 14-10-2018 Atu2018 2a32b992a8e3aa7284253c31f5a864de 84 SUPERFAMILY SSF143120 1 80 4.71E-22 T 14-10-2018 IPR036165 YefM-like superfamily Atu2018 2a32b992a8e3aa7284253c31f5a864de 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 54 2.3E-7 T 14-10-2018 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 PRINTS PR00419 Adrenodoxin reductase family signature 238 260 4.7E-6 T 14-10-2018 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 PRINTS PR00419 Adrenodoxin reductase family signature 262 275 4.7E-6 T 14-10-2018 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 SUPERFAMILY SSF54373 556 674 4.12E-23 T 14-10-2018 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 Gene3D G3DSA:3.90.660.10 283 686 2.5E-193 T 14-10-2018 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 SUPERFAMILY SSF51905 236 731 4.53E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 Gene3D G3DSA:3.50.50.60 212 741 2.5E-193 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 PIRSF PIRSF000319 1 753 0.0 T 14-10-2018 IPR012142 Tryptophan 2-monooxygenase GO:0009851|GO:0050361|GO:0055114 KEGG: 00380+1.13.12.3|MetaCyc: PWY-3161 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 Gene3D G3DSA:1.10.405.40 324 472 2.5E-193 T 14-10-2018 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 Pfam PF01593 Flavin containing amine oxidoreductase 246 729 5.6E-96 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Atu6011 3246d3e95ce8ab7cfa51e86fd1028693 755 Pfam PF02027 RolB/RolC glucosidase family 11 195 6.4E-36 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 11 459 70.399 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 186 448 3.1E-85 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 Gene3D G3DSA:3.40.50.720 14 413 2.4E-156 T 14-10-2018 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 173 179 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 215 232 3.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 233 249 3.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 163 191 3.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 139 152 3.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 310 336 3.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 15 183 3.8E-52 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 Gene3D G3DSA:3.30.360.10 173 447 2.4E-156 T 14-10-2018 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 PIRSF PIRSF000110 1 455 3.7E-151 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 12 448 2.0E-143 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 SUPERFAMILY SSF51735 10 186 2.26E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4835 2d6df0a8ceed4f045ee48f2ef7be20a3 461 SUPERFAMILY SSF55347 173 452 3.6E-93 T 14-10-2018 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 Gene3D G3DSA:1.20.1250.20 1 391 5.9E-65 T 14-10-2018 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 299 319 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 101 122 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 334 357 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 74 98 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 131 153 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 246 266 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 274 295 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 364 383 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 43 62 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 14 30 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 159 179 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 PRINTS PR01035 Tetracycline resistance protein signature 217 234 4.7E-101 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 SUPERFAMILY SSF103473 2 388 3.53E-57 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 Pfam PF07690 Major Facilitator Superfamily 9 350 1.4E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu4206 4dcb52bb472776b0eb2bf31243499b97 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu3808 530b6400244b02a76fd4cd874021931e 301 Pfam PF03466 LysR substrate binding domain 88 295 3.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3808 530b6400244b02a76fd4cd874021931e 301 SUPERFAMILY SSF53850 88 296 5.61E-35 T 14-10-2018 Atu3808 530b6400244b02a76fd4cd874021931e 301 Gene3D G3DSA:3.40.190.10 92 294 2.2E-49 T 14-10-2018 Atu3808 530b6400244b02a76fd4cd874021931e 301 Gene3D G3DSA:3.40.190.10 165 270 2.2E-49 T 14-10-2018 Atu3808 530b6400244b02a76fd4cd874021931e 301 Gene3D G3DSA:1.10.10.10 3 89 5.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3808 530b6400244b02a76fd4cd874021931e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3808 530b6400244b02a76fd4cd874021931e 301 SUPERFAMILY SSF46785 2 111 7.21E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 SUPERFAMILY SSF75625 3 245 7.85E-95 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 Gene3D G3DSA:3.30.70.980 132 204 2.3E-54 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 Gene3D G3DSA:1.10.10.200 1 81 2.9E-33 T 14-10-2018 IPR017856 Integrase-like, N-terminal Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 Gene3D G3DSA:3.30.70.980 83 235 2.3E-54 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.0E-95 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 34.945 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu3727 c0b42bfc4f859bbb5f894fb8c43a154b 248 Pfam PF01709 Transcriptional regulator 5 236 9.2E-96 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1958 739dc42be2971057249e338f3c3f09d4 172 Pfam PF00466 Ribosomal protein L10 3 98 4.5E-25 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Atu1958 739dc42be2971057249e338f3c3f09d4 172 Gene3D G3DSA:3.30.70.1730 1 131 2.8E-35 T 14-10-2018 Atu1958 739dc42be2971057249e338f3c3f09d4 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 4 141 3.0E-6 T 14-10-2018 Atu1958 739dc42be2971057249e338f3c3f09d4 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1958 739dc42be2971057249e338f3c3f09d4 172 SUPERFAMILY SSF160369 3 168 3.79E-52 T 14-10-2018 Atu1958 739dc42be2971057249e338f3c3f09d4 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.438 T 14-10-2018 IPR022973 Ribosomal protein L10 Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 SUPERFAMILY SSF52540 4 244 1.19E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 Gene3D G3DSA:2.40.50.100 240 359 1.3E-25 T 14-10-2018 Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 SMART SM00382 28 211 4.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 Gene3D G3DSA:3.40.50.300 2 238 6.5E-76 T 14-10-2018 Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 Gene3D G3DSA:2.40.50.140 287 342 1.3E-25 T 14-10-2018 Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 SUPERFAMILY SSF50331 237 354 5.1E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2600 8396c191b6a35b7a2ef41708c3f0947a 370 Pfam PF00005 ABC transporter 20 161 3.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3551 5bff08154a5e911765f7b2fcd64a851e 411 Pfam PF13439 Glycosyltransferase Family 4 15 134 6.3E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu3551 5bff08154a5e911765f7b2fcd64a851e 411 Gene3D G3DSA:3.40.50.2000 193 377 5.3E-28 T 14-10-2018 Atu3551 5bff08154a5e911765f7b2fcd64a851e 411 Gene3D G3DSA:3.40.50.2000 1 192 3.5E-21 T 14-10-2018 Atu3551 5bff08154a5e911765f7b2fcd64a851e 411 SUPERFAMILY SSF53756 1 399 3.56E-58 T 14-10-2018 Atu3551 5bff08154a5e911765f7b2fcd64a851e 411 Pfam PF00534 Glycosyl transferases group 1 220 365 1.3E-21 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 12 147 6.6E-39 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 78 98 5.6E-27 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 102 124 5.6E-27 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 128 146 5.6E-27 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 17 34 5.6E-27 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 Gene3D G3DSA:3.10.420.10 2 159 2.4E-57 T 14-10-2018 IPR035958 SecB-like superfamily Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 SUPERFAMILY SSF54611 6 146 4.8E-50 T 14-10-2018 IPR035958 SecB-like superfamily Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 150 31.827 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu0006 cc9ba1dffd684afda3f43e946549fa96 160 Pfam PF02556 Preprotein translocase subunit SecB 11 148 3.3E-54 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 Gene3D G3DSA:3.40.50.2300 159 286 1.7E-54 T 14-10-2018 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 SUPERFAMILY SSF53822 68 336 3.73E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4420 2581344e033219c5cb443ac4d83a57e1 353 SMART SM00354 7 77 1.9E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 Gene3D G3DSA:1.10.260.40 1 60 3.4E-18 T 14-10-2018 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 Gene3D G3DSA:3.40.50.2300 61 303 1.7E-54 T 14-10-2018 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 Pfam PF13377 Periplasmic binding protein-like domain 168 333 1.3E-24 T 14-10-2018 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 SUPERFAMILY SSF47413 8 65 2.31E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4420 2581344e033219c5cb443ac4d83a57e1 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 54 8.6E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3883 a8031b4ea611e04f7c55b2c70cfd82dd 120 SMART SM00448 3 114 1.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3883 a8031b4ea611e04f7c55b2c70cfd82dd 120 Gene3D G3DSA:3.40.50.2300 1 120 5.4E-31 T 14-10-2018 Atu3883 a8031b4ea611e04f7c55b2c70cfd82dd 120 SUPERFAMILY SSF52172 3 118 1.71E-30 T 14-10-2018 IPR011006 CheY-like superfamily Atu3883 a8031b4ea611e04f7c55b2c70cfd82dd 120 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3720 a5c1f22d0b8f74aec4d1b297d921cd48 192 Gene3D G3DSA:1.20.120.450 5 163 5.3E-36 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Atu3720 a5c1f22d0b8f74aec4d1b297d921cd48 192 Pfam PF05163 DinB family 11 169 8.2E-31 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB Atu3720 a5c1f22d0b8f74aec4d1b297d921cd48 192 SUPERFAMILY SSF109854 9 148 4.19E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Atu4607 8f65fefb807386b41cdf5d239a15b857 372 Pfam PF01757 Acyltransferase family 23 333 2.7E-19 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu1686 aaf48a530b6af7c5d13240d4ba921b8d 630 SUPERFAMILY SSF109998 40 290 2.82E-18 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Atu1686 aaf48a530b6af7c5d13240d4ba921b8d 630 Pfam PF13145 PPIC-type PPIASE domain 247 369 1.7E-25 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Atu1686 aaf48a530b6af7c5d13240d4ba921b8d 630 SUPERFAMILY SSF54534 223 354 7.2E-10 T 14-10-2018 Atu1686 aaf48a530b6af7c5d13240d4ba921b8d 630 Pfam PF13624 SurA N-terminal domain 1 163 1.7E-36 T 14-10-2018 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 Pfam PF00654 Voltage gated chloride channel 67 407 9.1E-77 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 Gene3D G3DSA:1.10.3080.10 19 437 1.2E-81 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 SUPERFAMILY SSF81340 3 425 5.75E-93 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 PRINTS PR00762 Chloride channel signature 163 182 1.6E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 PRINTS PR00762 Chloride channel signature 329 349 1.6E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 PRINTS PR00762 Chloride channel signature 375 394 1.6E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 PRINTS PR00762 Chloride channel signature 80 97 1.6E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu0832 f8bd5a45bff462c5e0e2bf6e1015ecd7 438 PRINTS PR00762 Chloride channel signature 357 373 1.6E-25 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 6 125 2.9E-39 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 SUPERFAMILY SSF81343 3 126 3.27E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 83 96 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 8 32 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 PIRSF PIRSF000178 1 127 6.9E-42 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 Gene3D G3DSA:1.20.1300.10 1 127 1.1E-40 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2645 fd3a9ec15853f9d730b420b74615f9e6 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 121 3.3E-28 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Atu2680 98e5f8daa56d3222dea853770225043e 236 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2680 98e5f8daa56d3222dea853770225043e 236 Pfam PF00005 ABC transporter 25 171 5.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2680 98e5f8daa56d3222dea853770225043e 236 Gene3D G3DSA:3.40.50.300 3 234 9.5E-64 T 14-10-2018 Atu2680 98e5f8daa56d3222dea853770225043e 236 SUPERFAMILY SSF52540 5 227 3.25E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2680 98e5f8daa56d3222dea853770225043e 236 SMART SM00382 34 222 2.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5007 2ca1fadb3015d6ca0868635483875bba 354 SMART SM00354 10 80 8.9E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 Gene3D G3DSA:3.40.50.2300 71 343 4.4E-75 T 14-10-2018 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 Pfam PF13377 Periplasmic binding protein-like domain 179 351 6.9E-31 T 14-10-2018 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 57 4.3E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 SUPERFAMILY SSF47413 11 68 2.25E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 Gene3D G3DSA:3.40.50.2300 170 348 4.4E-75 T 14-10-2018 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-10-2018 Atu5007 2ca1fadb3015d6ca0868635483875bba 354 SUPERFAMILY SSF53822 70 352 4.89E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5007 2ca1fadb3015d6ca0868635483875bba 354 Gene3D G3DSA:1.10.260.40 3 67 5.2E-19 T 14-10-2018 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 SUPERFAMILY SSF103473 21 434 2.35E-64 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 Pfam PF07690 Major Facilitator Superfamily 31 424 8.3E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 Gene3D G3DSA:1.20.1250.20 281 522 3.9E-18 T 14-10-2018 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 Gene3D G3DSA:1.20.1720.10 26 232 1.1E-36 T 14-10-2018 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 24 508 1.7E-136 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 415 434 2.9E-6 T 14-10-2018 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 29 53 2.9E-6 T 14-10-2018 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 175 199 2.9E-6 T 14-10-2018 Atu4479 af38cb8ffcf63eb0726b1c4354817033 527 PRINTS PR01036 Tetracycline resistance protein TetB signature 150 174 2.9E-6 T 14-10-2018 Atu4099 eebced42b7ffcb785805cac5cc352612 300 Gene3D G3DSA:1.10.10.10 216 289 7.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4099 eebced42b7ffcb785805cac5cc352612 300 SUPERFAMILY SSF46785 218 288 6.8E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4099 eebced42b7ffcb785805cac5cc352612 300 SUPERFAMILY SSF55811 12 137 8.31E-12 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu4099 eebced42b7ffcb785805cac5cc352612 300 PIRSF PIRSF019423 1 300 2.6E-151 T 14-10-2018 IPR011213 Nicotinic acid mononucleotide biosynthesis protein Atu4406 82517457863f46d3571f1851d2ce032f 166 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu4406 82517457863f46d3571f1851d2ce032f 166 Gene3D G3DSA:3.30.70.20 95 166 7.5E-14 T 14-10-2018 Atu4406 82517457863f46d3571f1851d2ce032f 166 Gene3D G3DSA:3.30.70.20 28 87 5.2E-12 T 14-10-2018 Atu4406 82517457863f46d3571f1851d2ce032f 166 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 25 160 21.604 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 Atu4406 82517457863f46d3571f1851d2ce032f 166 SUPERFAMILY SSF54862 30 157 2.09E-21 T 14-10-2018 Atu4406 82517457863f46d3571f1851d2ce032f 166 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 31 154 5.9E-31 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 Atu4406 82517457863f46d3571f1851d2ce032f 166 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 36 47 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu4406 82517457863f46d3571f1851d2ce032f 166 Pfam PF13187 4Fe-4S dicluster domain 35 79 2.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu4406 82517457863f46d3571f1851d2ce032f 166 Pfam PF12838 4Fe-4S dicluster domain 107 153 1.0E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu3849 c1c2f1ba3218d518c30f3d4b8752773f 210 Pfam PF02796 Helix-turn-helix domain of resolvase 160 197 1.2E-6 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Atu3849 c1c2f1ba3218d518c30f3d4b8752773f 210 SUPERFAMILY SSF53041 1 158 4.45E-29 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Atu3849 c1c2f1ba3218d518c30f3d4b8752773f 210 Gene3D G3DSA:3.40.50.1390 3 168 1.2E-29 T 14-10-2018 Atu3849 c1c2f1ba3218d518c30f3d4b8752773f 210 SMART SM00857 3 158 5.0E-40 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atu3849 c1c2f1ba3218d518c30f3d4b8752773f 210 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Atu3849 c1c2f1ba3218d518c30f3d4b8752773f 210 Pfam PF00239 Resolvase, N terminal domain 4 158 7.8E-28 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Atu4437 551bca36425618c61259dec5e92464e2 300 SUPERFAMILY SSF53850 90 297 2.13E-39 T 14-10-2018 Atu4437 551bca36425618c61259dec5e92464e2 300 SUPERFAMILY SSF46785 1 111 5.62E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4437 551bca36425618c61259dec5e92464e2 300 Gene3D G3DSA:1.10.10.10 1 88 2.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4437 551bca36425618c61259dec5e92464e2 300 Gene3D G3DSA:3.40.190.290 90 298 1.9E-34 T 14-10-2018 Atu4437 551bca36425618c61259dec5e92464e2 300 Pfam PF03466 LysR substrate binding domain 88 292 1.8E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4437 551bca36425618c61259dec5e92464e2 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.4E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0039 caa6e52c50418cdb38c35262c2b2a9d2 258 Pfam PF00977 Histidine biosynthesis protein 6 239 4.5E-88 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Atu0039 caa6e52c50418cdb38c35262c2b2a9d2 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 45.89 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Atu0039 caa6e52c50418cdb38c35262c2b2a9d2 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 6.9E-104 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Atu0039 caa6e52c50418cdb38c35262c2b2a9d2 258 SUPERFAMILY SSF51366 4 256 3.92E-83 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu0039 caa6e52c50418cdb38c35262c2b2a9d2 258 Gene3D G3DSA:3.20.20.70 1 258 3.5E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1827 feaee37e32010ec6d7c8724ed1662da8 363 Gene3D G3DSA:3.30.420.40 1 354 1.5E-106 T 14-10-2018 Atu1827 feaee37e32010ec6d7c8724ed1662da8 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 363 32.723 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Atu1827 feaee37e32010ec6d7c8724ed1662da8 363 SUPERFAMILY SSF53067 8 325 2.98E-18 T 14-10-2018 Atu1827 feaee37e32010ec6d7c8724ed1662da8 363 Gene3D G3DSA:3.30.420.40 141 323 1.5E-106 T 14-10-2018 Atu1827 feaee37e32010ec6d7c8724ed1662da8 363 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 360 2.5E-82 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Atu5071 de847e790f53edf0fe1ea15b4f5c1fe2 505 SUPERFAMILY SSF53850 31 484 6.15E-97 T 14-10-2018 Atu5071 de847e790f53edf0fe1ea15b4f5c1fe2 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 424 1.3E-75 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu5071 de847e790f53edf0fe1ea15b4f5c1fe2 505 PIRSF PIRSF002741 14 495 2.2E-74 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu5071 de847e790f53edf0fe1ea15b4f5c1fe2 505 Gene3D G3DSA:3.40.190.10 20 261 4.9E-53 T 14-10-2018 Atu5071 de847e790f53edf0fe1ea15b4f5c1fe2 505 Gene3D G3DSA:3.10.105.10 262 473 9.1E-41 T 14-10-2018 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 204 214 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 14 390 3.1E-155 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 Gene3D G3DSA:3.90.550.10 1 293 2.9E-97 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 SUPERFAMILY SSF53448 15 370 6.1E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 19 38 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 106 114 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 SUPERFAMILY SSF51161 302 401 2.06E-14 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 Gene3D G3DSA:2.160.10.10 294 420 1.0E-32 T 14-10-2018 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 10 416 51.865 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Atu4076 c024a941a79d5ebbdce2871b2b2112c0 420 Pfam PF00483 Nucleotidyl transferase 16 284 2.2E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 9.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 9.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 9.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 Gene3D G3DSA:1.10.10.10 2 53 2.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.1E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 SMART SM00344 1 110 7.7E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.3E-19 T 14-10-2018 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 SUPERFAMILY SSF46785 1 91 1.59E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 Gene3D G3DSA:3.30.70.920 54 137 2.2E-25 T 14-10-2018 Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 SUPERFAMILY SSF54909 63 149 2.55E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1885 1345a40ad2d630b2f7dfda51d8c49393 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu4275 7e287e7b36d93d3de9d89ec6b57f718f 235 SUPERFAMILY SSF160467 23 110 1.44E-11 T 14-10-2018 Atu4275 7e287e7b36d93d3de9d89ec6b57f718f 235 SUPERFAMILY SSF50891 106 233 1.52E-36 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu4275 7e287e7b36d93d3de9d89ec6b57f718f 235 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 28 229 1.1E-52 T 14-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Atu4275 7e287e7b36d93d3de9d89ec6b57f718f 235 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 23 219 2.0E-57 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Atu4275 7e287e7b36d93d3de9d89ec6b57f718f 235 Gene3D G3DSA:2.40.100.10 105 234 1.1E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu4275 7e287e7b36d93d3de9d89ec6b57f718f 235 SMART SM00796 22 220 1.3E-86 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Atu0781 5dd96b6757f7187f1e1f49593d431f9d 201 SUPERFAMILY SSF143456 15 201 3.66E-63 T 14-10-2018 Atu0781 5dd96b6757f7187f1e1f49593d431f9d 201 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 13 201 37.194 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 Atu0781 5dd96b6757f7187f1e1f49593d431f9d 201 Pfam PF02622 Uncharacterized ACR, COG1678 24 188 2.5E-46 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 Atu0781 5dd96b6757f7187f1e1f49593d431f9d 201 Gene3D G3DSA:3.40.1740.10 11 201 6.9E-66 T 14-10-2018 Atu2377 52d3369e58244dcf55220b1e5517b39e 464 Pfam PF02706 Chain length determinant protein 13 103 6.6E-10 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Atu2377 52d3369e58244dcf55220b1e5517b39e 464 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 443 3.8E-8 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain Atu1553 1a0c81f65dd1acd12bcd5b9f4b720fe9 141 Gene3D G3DSA:3.30.450.20 25 135 1.7E-13 T 14-10-2018 Atu1553 1a0c81f65dd1acd12bcd5b9f4b720fe9 141 SUPERFAMILY SSF55785 26 133 8.2E-12 T 14-10-2018 IPR035965 PAS domain superfamily Atu1553 1a0c81f65dd1acd12bcd5b9f4b720fe9 141 Pfam PF08447 PAS fold 45 124 1.1E-8 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu8130 885c376f9df5a85e05370805f7e01c44 263 TIGRFAM TIGR02186 alph_Pro_TM: conserved hypothetical protein 2 263 2.8E-128 T 14-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane Atu8130 885c376f9df5a85e05370805f7e01c44 263 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 32 262 4.0E-74 T 14-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane Atu1160 8440d7755eb880e30c2348d557277912 152 Pfam PF06271 RDD family 22 144 1.1E-16 T 14-10-2018 IPR010432 RDD Atu5459 8ffc2c3c7b09f3e1aa271492156f0c58 423 Pfam PF13416 Bacterial extracellular solute-binding protein 51 350 3.3E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5459 8ffc2c3c7b09f3e1aa271492156f0c58 423 Gene3D G3DSA:3.40.190.10 28 422 4.5E-72 T 14-10-2018 Atu5459 8ffc2c3c7b09f3e1aa271492156f0c58 423 SUPERFAMILY SSF53850 29 421 8.28E-70 T 14-10-2018 Atu5409 d554da9ae4d430a0f276de89d53ec783 311 Gene3D G3DSA:3.40.190.10 68 290 1.8E-47 T 14-10-2018 Atu5409 d554da9ae4d430a0f276de89d53ec783 311 SUPERFAMILY SSF53850 61 292 7.42E-47 T 14-10-2018 Atu5409 d554da9ae4d430a0f276de89d53ec783 311 SMART SM00062 65 294 7.1E-36 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu5409 d554da9ae4d430a0f276de89d53ec783 311 Gene3D G3DSA:3.40.190.10 151 251 1.8E-47 T 14-10-2018 Atu5409 d554da9ae4d430a0f276de89d53ec783 311 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 290 9.6E-43 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu1994 b93e92361ea595e836d8a3146cf190be 130 Pfam PF03061 Thioesterase superfamily 27 99 1.4E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atu1994 b93e92361ea595e836d8a3146cf190be 130 SUPERFAMILY SSF54637 9 128 8.39E-35 T 14-10-2018 IPR029069 HotDog domain superfamily Atu1994 b93e92361ea595e836d8a3146cf190be 130 Gene3D G3DSA:3.10.129.10 1 130 4.7E-36 T 14-10-2018 Atu2330 c94f37769f1b2d1720cc72522d5666fd 372 Gene3D G3DSA:3.50.50.60 1 340 3.1E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2330 c94f37769f1b2d1720cc72522d5666fd 372 Pfam PF01266 FAD dependent oxidoreductase 1 339 5.0E-29 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu2330 c94f37769f1b2d1720cc72522d5666fd 372 SUPERFAMILY SSF51905 1 268 3.17E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2330 c94f37769f1b2d1720cc72522d5666fd 372 Gene3D G3DSA:3.30.9.10 77 304 3.1E-41 T 14-10-2018 Atu1312 032c1d8e455db355f44aa6a2cbc9e6b6 98 Gene3D G3DSA:1.10.8.1250 10 91 1.0E-15 T 14-10-2018 IPR038296 Antitoxin ParD superfamily Atu1312 032c1d8e455db355f44aa6a2cbc9e6b6 98 SUPERFAMILY SSF47598 1 44 1.08E-9 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu1312 032c1d8e455db355f44aa6a2cbc9e6b6 98 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 5 71 2.0E-12 T 14-10-2018 IPR022789 Antitoxin ParD Atu1312 032c1d8e455db355f44aa6a2cbc9e6b6 98 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 60 3.4E-16 T 14-10-2018 IPR022789 Antitoxin ParD Atu0895 e0765cdfe89607f4c57da4893d413bc7 336 Gene3D G3DSA:3.40.190.100 117 250 1.5E-41 T 14-10-2018 Atu0895 e0765cdfe89607f4c57da4893d413bc7 336 SUPERFAMILY SSF53850 26 331 3.26E-72 T 14-10-2018 Atu0895 e0765cdfe89607f4c57da4893d413bc7 336 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 314 6.3E-62 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu0895 e0765cdfe89607f4c57da4893d413bc7 336 Gene3D G3DSA:3.40.190.10 33 324 1.5E-41 T 14-10-2018 Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 Gene3D G3DSA:3.30.70.890 177 298 1.5E-26 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 12 298 31.417 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 12 281 5.9E-55 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 Gene3D G3DSA:3.30.230.10 2 174 1.1E-49 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 SUPERFAMILY SSF55060 177 296 1.29E-27 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 Pfam PF00288 GHMP kinases N terminal domain 102 157 2.8E-8 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 SUPERFAMILY SSF54211 15 171 5.16E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 Pfam PF08544 GHMP kinases C terminal 228 287 8.0E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Atu0632 ae2e4d36329d6eb56e3e5733bfd056a7 299 PIRSF PIRSF010376 10 299 3.4E-85 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Atu2358 f92c832182015c663d2a4c62570de57f 327 Pfam PF01757 Acyltransferase family 5 295 1.3E-15 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu4122 e5f2dcee4d6429d2bb7e819ebeee61dc 305 Gene3D G3DSA:3.40.190.290 95 290 9.5E-29 T 14-10-2018 Atu4122 e5f2dcee4d6429d2bb7e819ebeee61dc 305 Gene3D G3DSA:1.10.10.10 6 89 3.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4122 e5f2dcee4d6429d2bb7e819ebeee61dc 305 Pfam PF03466 LysR substrate binding domain 92 289 2.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4122 e5f2dcee4d6429d2bb7e819ebeee61dc 305 SUPERFAMILY SSF53850 93 292 2.53E-32 T 14-10-2018 Atu4122 e5f2dcee4d6429d2bb7e819ebeee61dc 305 SUPERFAMILY SSF46785 5 115 4.69E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4122 e5f2dcee4d6429d2bb7e819ebeee61dc 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5252 ff7007ff7c875bf4513a0f70436be4f2 329 Gene3D G3DSA:3.90.1200.10 123 314 2.8E-21 T 14-10-2018 Atu5252 ff7007ff7c875bf4513a0f70436be4f2 329 Pfam PF01636 Phosphotransferase enzyme family 37 274 3.2E-34 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Atu5252 ff7007ff7c875bf4513a0f70436be4f2 329 SUPERFAMILY SSF56112 16 307 1.6E-54 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu2489 cd9bf7abe211dbaf097d8e02cf8cdbf3 271 SUPERFAMILY SSF53955 19 270 2.25E-71 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu2489 cd9bf7abe211dbaf097d8e02cf8cdbf3 271 Gene3D G3DSA:1.10.530.10 76 236 6.0E-52 T 14-10-2018 Atu2489 cd9bf7abe211dbaf097d8e02cf8cdbf3 271 Gene3D G3DSA:1.10.8.350 46 208 6.0E-52 T 14-10-2018 Atu2489 cd9bf7abe211dbaf097d8e02cf8cdbf3 271 Pfam PF13406 Transglycosylase SLT domain 34 238 1.8E-70 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 Atu8096 8cf346793bb478d5c29c58dc6b0d74ed 59 SUPERFAMILY SSF69047 1 59 4.18E-18 T 14-10-2018 IPR036629 YjbJ superfamily Atu8096 8cf346793bb478d5c29c58dc6b0d74ed 59 Gene3D G3DSA:1.10.1470.10 1 59 1.1E-15 T 14-10-2018 IPR036629 YjbJ superfamily Atu8096 8cf346793bb478d5c29c58dc6b0d74ed 59 Pfam PF05532 CsbD-like 4 56 6.2E-21 T 14-10-2018 IPR008462 CsbD-like domain Atu4393 e5ab41e1b71582def8dae5e798eeda9f 196 Pfam PF02441 Flavoprotein 5 168 2.2E-25 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Atu4393 e5ab41e1b71582def8dae5e798eeda9f 196 SUPERFAMILY SSF52507 5 181 9.94E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atu4393 e5ab41e1b71582def8dae5e798eeda9f 196 Gene3D G3DSA:3.40.50.1950 4 194 9.9E-72 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Atu4393 e5ab41e1b71582def8dae5e798eeda9f 196 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 4 190 35.283 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Atu4393 e5ab41e1b71582def8dae5e798eeda9f 196 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 181 2.1E-66 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Atu5242 d5d9cfd177992aa49bc5edb6981dd9d1 384 Pfam PF03576 Peptidase family S58 28 348 2.6E-104 T 14-10-2018 IPR005321 Peptidase S58, DmpA Atu5242 d5d9cfd177992aa49bc5edb6981dd9d1 384 SUPERFAMILY SSF56266 11 368 4.18E-120 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu5242 d5d9cfd177992aa49bc5edb6981dd9d1 384 Gene3D G3DSA:3.60.70.12 10 373 1.2E-130 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu4267 b84009af1b442051d439a9ff9eeeee72 134 Gene3D G3DSA:3.10.180.10 1 130 2.8E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4267 b84009af1b442051d439a9ff9eeeee72 134 SUPERFAMILY SSF54593 2 132 4.4E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4267 b84009af1b442051d439a9ff9eeeee72 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 126 7.2E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0806 dff1a5ae6d5f235539a424d65990c27a 306 Pfam PF07386 Protein of unknown function (DUF1499) 241 296 2.1E-7 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 Atu3040 e315b8f87342c40e6e2017be4af6c3a7 377 Pfam PF06032 Protein of unknown function (DUF917) 20 369 3.0E-120 T 14-10-2018 IPR010318 Protein of unknown function DUF917 Atu3040 e315b8f87342c40e6e2017be4af6c3a7 377 SUPERFAMILY SSF160991 15 369 2.35E-114 T 14-10-2018 Atu3040 e315b8f87342c40e6e2017be4af6c3a7 377 Gene3D G3DSA:3.40.1610.10 15 234 2.8E-51 T 14-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal Atu1108 f38ee5236945f0336c94fd186e276369 389 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 4.6E-53 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Atu6142 df0255563a9c904971bae51d2cc91c8f 308 Gene3D G3DSA:1.10.3720.10 84 299 7.4E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu6142 df0255563a9c904971bae51d2cc91c8f 308 SUPERFAMILY SSF161098 93 289 2.35E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu6142 df0255563a9c904971bae51d2cc91c8f 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 3.9E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 ProSitePatterns PS00480 Citrate synthase signature. 253 265 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PIRSF PIRSF001369 10 366 1.2E-88 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 SUPERFAMILY SSF48256 13 366 2.36E-97 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 Gene3D G3DSA:1.10.230.10 219 321 2.9E-91 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PRINTS PR00143 Citrate synthase signature 122 135 4.2E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PRINTS PR00143 Citrate synthase signature 246 266 4.2E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PRINTS PR00143 Citrate synthase signature 171 186 4.2E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PRINTS PR00143 Citrate synthase signature 193 221 4.2E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PRINTS PR00143 Citrate synthase signature 327 341 4.2E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 PRINTS PR00143 Citrate synthase signature 307 323 4.2E-31 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 Pfam PF00285 Citrate synthase, C-terminal domain 15 357 6.1E-93 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5306 5a3f0db8ba1db7432a007e0b83b8ac7e 366 Gene3D G3DSA:1.10.580.10 26 347 2.9E-91 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu4229 5ec850f2d985759aea20f9e0200e5eac 442 SUPERFAMILY SSF51395 24 439 1.59E-89 T 14-10-2018 Atu4229 5ec850f2d985759aea20f9e0200e5eac 442 Gene3D G3DSA:3.20.20.70 62 432 3.7E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4229 5ec850f2d985759aea20f9e0200e5eac 442 PIRSF PIRSF006429 2 440 4.3E-152 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein Atu4229 5ec850f2d985759aea20f9e0200e5eac 442 PIRSF PIRSF500061 3 441 7.9E-169 T 14-10-2018 Atu4229 5ec850f2d985759aea20f9e0200e5eac 442 Pfam PF01645 Conserved region in glutamate synthase 356 404 1.5E-5 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Atu4229 5ec850f2d985759aea20f9e0200e5eac 442 Pfam PF01645 Conserved region in glutamate synthase 80 332 9.9E-76 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Atu1527 c9519b55afcd158238efb5d37aafeb11 53 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 1.5E-27 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Atu1527 c9519b55afcd158238efb5d37aafeb11 53 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 44 3.6E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Atu1050 079fa696915520f4a84c037e6cbebfda 273 Gene3D G3DSA:2.30.30.60 129 178 4.5E-16 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atu1050 079fa696915520f4a84c037e6cbebfda 273 SUPERFAMILY SSF50182 114 179 1.31E-16 T 14-10-2018 IPR010920 LSM domain superfamily Atu1050 079fa696915520f4a84c037e6cbebfda 273 SUPERFAMILY SSF82689 181 267 2.48E-15 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atu1050 079fa696915520f4a84c037e6cbebfda 273 SUPERFAMILY SSF82861 27 112 1.31E-15 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atu1050 079fa696915520f4a84c037e6cbebfda 273 Gene3D G3DSA:3.30.70.100 180 271 2.0E-13 T 14-10-2018 Atu1050 079fa696915520f4a84c037e6cbebfda 273 Pfam PF00924 Mechanosensitive ion channel 73 267 4.3E-47 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atu5439 f9dca99e759c4cac99ec177d088dd867 188 SUPERFAMILY SSF159275 1 184 6.02E-53 T 14-10-2018 Atu5439 f9dca99e759c4cac99ec177d088dd867 188 Pfam PF06475 Putative glycolipid-binding 4 184 1.2E-57 T 14-10-2018 IPR009467 Putative glycolipid-binding protein Atu1356 3e4f781ece672cce14fb2fdbed753437 359 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 64 351 8.8E-137 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 Atu1356 3e4f781ece672cce14fb2fdbed753437 359 Pfam PF05128 Domain of unknown function (DUF697) 195 347 2.6E-47 T 14-10-2018 IPR021147 Protein of unknown function DUF697 Atu1356 3e4f781ece672cce14fb2fdbed753437 359 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 18 357 37.593 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 Atu0372 5e560b832ff8a9a42462fc4e2ba58dcb 306 Pfam PF03641 Possible lysine decarboxylase 170 299 5.5E-34 T 14-10-2018 IPR031100 LOG family Atu0372 5e560b832ff8a9a42462fc4e2ba58dcb 306 Gene3D G3DSA:3.40.50.450 77 304 4.9E-60 T 14-10-2018 Atu0372 5e560b832ff8a9a42462fc4e2ba58dcb 306 SUPERFAMILY SSF102405 69 300 6.11E-56 T 14-10-2018 Atu4660 03dfc3340241abbc6e60114bf6671620 488 Pfam PF02056 Family 4 glycosyl hydrolase 4 185 3.9E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 415 4.0E-47 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Atu4660 03dfc3340241abbc6e60114bf6671620 488 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 170 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 Gene3D G3DSA:3.90.1820.20 1 439 3.1E-130 T 14-10-2018 Atu4660 03dfc3340241abbc6e60114bf6671620 488 SUPERFAMILY SSF51735 2 168 2.48E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4660 03dfc3340241abbc6e60114bf6671620 488 PRINTS PR00732 Glycosyl hydrolase family 4 signature 4 19 1.7E-16 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 PRINTS PR00732 Glycosyl hydrolase family 4 signature 73 89 1.7E-16 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.7E-16 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 1.7E-16 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 1.7E-16 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4660 03dfc3340241abbc6e60114bf6671620 488 SUPERFAMILY SSF56327 169 444 6.39E-59 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Atu3740 7453114c3798dac0a8dd6f4f8dc61f1c 341 SUPERFAMILY SSF51569 2 339 4.92E-127 T 14-10-2018 Atu3740 7453114c3798dac0a8dd6f4f8dc61f1c 341 Pfam PF00274 Fructose-bisphosphate aldolase class-I 5 339 6.3E-137 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3740 7453114c3798dac0a8dd6f4f8dc61f1c 341 Gene3D G3DSA:3.20.20.70 1 341 1.8E-150 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3740 7453114c3798dac0a8dd6f4f8dc61f1c 341 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 214 224 - T 14-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Atu3167 3178141dc21eb05635be008014e95e78 425 PIRSF PIRSF009264 1 425 5.9E-190 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 Atu3167 3178141dc21eb05635be008014e95e78 425 Gene3D G3DSA:1.10.400.20 287 420 3.1E-40 T 14-10-2018 Atu3167 3178141dc21eb05635be008014e95e78 425 Pfam PF08013 Tagatose 6 phosphate kinase 5 420 2.7E-178 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 Atu3167 3178141dc21eb05635be008014e95e78 425 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 7 420 1.6E-194 T 14-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 Atu3167 3178141dc21eb05635be008014e95e78 425 Gene3D G3DSA:3.20.20.70 18 286 1.0E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3167 3178141dc21eb05635be008014e95e78 425 SUPERFAMILY SSF51569 5 420 1.06E-150 T 14-10-2018 Atu3508 6c97229a10d9a40b4fe7d07d9ef9806c 250 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 13 247 38.154 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Atu3508 6c97229a10d9a40b4fe7d07d9ef9806c 250 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 13 241 8.6E-86 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Atu3508 6c97229a10d9a40b4fe7d07d9ef9806c 250 SUPERFAMILY SSF53335 15 245 7.33E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3508 6c97229a10d9a40b4fe7d07d9ef9806c 250 Gene3D G3DSA:3.40.50.150 13 247 4.8E-71 T 14-10-2018 Atu3508 6c97229a10d9a40b4fe7d07d9ef9806c 250 Pfam PF08241 Methyltransferase domain 69 163 8.0E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 ProSitePatterns PS00221 MIP family signature. 61 69 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 PRINTS PR00783 Major intrinsic protein family signature 165 187 3.7E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 PRINTS PR00783 Major intrinsic protein family signature 80 99 3.7E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 PRINTS PR00783 Major intrinsic protein family signature 43 67 3.7E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 PRINTS PR00783 Major intrinsic protein family signature 204 224 3.7E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 PRINTS PR00783 Major intrinsic protein family signature 135 153 3.7E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 PRINTS PR00783 Major intrinsic protein family signature 3 22 3.7E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 Pfam PF00230 Major intrinsic protein 3 220 1.1E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 221 7.5E-57 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 228 35.986 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 Gene3D G3DSA:1.20.1080.10 1 228 2.0E-90 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Atu5361 b00b8d82575abe3c8b7c5c46800efe6d 228 SUPERFAMILY SSF81338 3 225 5.1E-65 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Atu2029 a47d5fd5fa2e6e9dc8ef96028d7dc0b8 126 Pfam PF03640 Secreted repeat of unknown function 28 69 1.1E-13 T 14-10-2018 IPR005297 Lipoprotein repeat Atu2029 a47d5fd5fa2e6e9dc8ef96028d7dc0b8 126 Pfam PF03640 Secreted repeat of unknown function 83 125 7.4E-18 T 14-10-2018 IPR005297 Lipoprotein repeat Atu2029 a47d5fd5fa2e6e9dc8ef96028d7dc0b8 126 PIRSF PIRSF029720 1 126 3.7E-51 T 14-10-2018 IPR014558 Uncharacterised conserved lipoprotein Atu5547 bb5a29ae81b882734707e01b32911a68 323 SUPERFAMILY SSF56281 43 314 1.83E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5547 bb5a29ae81b882734707e01b32911a68 323 SMART SM00849 96 296 6.1E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu5547 bb5a29ae81b882734707e01b32911a68 323 Gene3D G3DSA:3.60.15.10 38 322 1.3E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu5547 bb5a29ae81b882734707e01b32911a68 323 Pfam PF00753 Metallo-beta-lactamase superfamily 98 281 3.0E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu0530 783d67bb35890ae824a782868dd8c946 343 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 326 2.2E-123 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Atu0530 783d67bb35890ae824a782868dd8c946 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 253 4.7E-56 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu0530 783d67bb35890ae824a782868dd8c946 343 Gene3D G3DSA:3.40.50.720 3 253 3.7E-115 T 14-10-2018 Atu0530 783d67bb35890ae824a782868dd8c946 343 Gene3D G3DSA:3.90.25.10 174 307 3.7E-115 T 14-10-2018 Atu0530 783d67bb35890ae824a782868dd8c946 343 SUPERFAMILY SSF51735 1 323 7.54E-90 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4499 411a20460cf892ddbf7796684e09e65b 255 Pfam PF06226 Protein of unknown function (DUF1007) 50 255 3.6E-59 T 14-10-2018 IPR010412 Protein of unknown function DUF1007 Atu4499 411a20460cf892ddbf7796684e09e65b 255 PIRSF PIRSF008159 34 255 1.9E-94 T 14-10-2018 IPR016537 Uncharacterised conserved protein UCP008159, Atu0730 b4067169812de1092e5e0377abe2bc4c 174 Pfam PF07886 BA14K-like protein 141 170 3.1E-14 T 14-10-2018 IPR012413 BA14k family GO:0009405 Atu5044 f5e6234ae97bf87cc164a46b7eb6d07e 375 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 51 351 3.5E-45 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system Atu5044 f5e6234ae97bf87cc164a46b7eb6d07e 375 Gene3D G3DSA:3.10.450.620 44 122 3.4E-5 T 14-10-2018 Atu5323 dcdaa337255c26bd90f75109b32bc45d 417 Pfam PF07690 Major Facilitator Superfamily 24 354 5.7E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu5323 dcdaa337255c26bd90f75109b32bc45d 417 SUPERFAMILY SSF103473 12 393 2.35E-31 T 14-10-2018 IPR036259 MFS transporter superfamily Atu5323 dcdaa337255c26bd90f75109b32bc45d 417 Gene3D G3DSA:1.20.1250.20 2 387 4.4E-24 T 14-10-2018 Atu5497 8b9eba2c10ffb4b807e85b8fbb1a8446 329 Gene3D G3DSA:3.40.50.720 195 324 3.9E-23 T 14-10-2018 Atu5497 8b9eba2c10ffb4b807e85b8fbb1a8446 329 Pfam PF13478 XdhC Rossmann domain 201 318 2.4E-20 T 14-10-2018 IPR027051 XdhC Rossmann domain Atu5497 8b9eba2c10ffb4b807e85b8fbb1a8446 329 Pfam PF02625 XdhC and CoxI family 50 112 3.9E-17 T 14-10-2018 IPR003777 XdhC- CoxI Atu1405 83c48cc944c6277c4254d21c27094614 251 SUPERFAMILY SSF46785 19 91 6.1E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1405 83c48cc944c6277c4254d21c27094614 251 Gene3D G3DSA:1.20.120.530 96 233 3.4E-10 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1405 83c48cc944c6277c4254d21c27094614 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 87 9.5E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1405 83c48cc944c6277c4254d21c27094614 251 SUPERFAMILY SSF48008 98 222 6.8E-8 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1405 83c48cc944c6277c4254d21c27094614 251 Pfam PF07729 FCD domain 98 220 8.9E-12 T 14-10-2018 IPR011711 GntR, C-terminal Atu1405 83c48cc944c6277c4254d21c27094614 251 Gene3D G3DSA:1.10.10.10 2 89 3.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1405 83c48cc944c6277c4254d21c27094614 251 SMART SM00345 29 87 1.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu5024 b22345cf40f1077735c4d11af2fe6e6c 566 Gene3D G3DSA:3.40.50.300 153 276 1.3E-21 T 14-10-2018 Atu5024 b22345cf40f1077735c4d11af2fe6e6c 566 Gene3D G3DSA:3.40.50.300 1 110 2.0E-12 T 14-10-2018 Atu5024 b22345cf40f1077735c4d11af2fe6e6c 566 SUPERFAMILY SSF52540 5 541 5.67E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5024 b22345cf40f1077735c4d11af2fe6e6c 566 Pfam PF13245 AAA domain 3 235 1.2E-16 T 14-10-2018 Atu1633 5fb22066ff934bb85f626b5a65fc3470 835 Gene3D G3DSA:3.30.70.100 671 765 1.4E-23 T 14-10-2018 Atu1633 5fb22066ff934bb85f626b5a65fc3470 835 SUPERFAMILY SSF50182 604 670 2.68E-17 T 14-10-2018 IPR010920 LSM domain superfamily Atu1633 5fb22066ff934bb85f626b5a65fc3470 835 SUPERFAMILY SSF82861 519 603 1.7E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atu1633 5fb22066ff934bb85f626b5a65fc3470 835 Gene3D G3DSA:2.30.30.60 620 669 2.8E-13 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atu1633 5fb22066ff934bb85f626b5a65fc3470 835 SUPERFAMILY SSF82689 672 770 4.18E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atu1633 5fb22066ff934bb85f626b5a65fc3470 835 Pfam PF00924 Mechanosensitive ion channel 565 761 2.4E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atu2120 1c387a2d810c30c2191b0e2f12d1d40b 221 SUPERFAMILY SSF53335 8 167 3.35E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2120 1c387a2d810c30c2191b0e2f12d1d40b 221 Gene3D G3DSA:3.40.50.150 20 192 1.4E-29 T 14-10-2018 Atu2120 1c387a2d810c30c2191b0e2f12d1d40b 221 Pfam PF13649 Methyltransferase domain 39 136 5.7E-16 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 SUPERFAMILY SSF51905 2 327 5.01E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6019 0e6e0c55537639e254424f06b031c165 472 Pfam PF04324 BFD-like [2Fe-2S] binding domain 378 430 3.7E-9 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Atu6019 0e6e0c55537639e254424f06b031c165 472 Gene3D G3DSA:3.50.50.60 122 262 8.5E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6019 0e6e0c55537639e254424f06b031c165 472 Gene3D G3DSA:1.10.10.1100 368 440 9.7E-18 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 Gene3D G3DSA:3.50.50.60 8 314 8.5E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 1.3E-12 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.3E-12 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-12 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 1.3E-12 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.4E-9 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 4.4E-9 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 4.4E-9 T 14-10-2018 Atu6019 0e6e0c55537639e254424f06b031c165 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 317 4.4E-16 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Atu6019 0e6e0c55537639e254424f06b031c165 472 PIRSF PIRSF037495 1 468 1.5E-165 T 14-10-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 Pfam PF00667 FAD binding domain 221 414 4.2E-24 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PIRSF PIRSF000207 9 589 1.1E-226 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu0146 c69a7f23407f470001caed32311336ce 589 Pfam PF00175 Oxidoreductase NAD-binding domain 447 553 5.8E-15 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 SUPERFAMILY SSF63380 217 436 5.91E-54 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu0146 c69a7f23407f470001caed32311336ce 589 Gene3D G3DSA:2.40.30.10 221 429 8.2E-62 T 14-10-2018 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 515 531 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 409 418 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 471 480 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 538 546 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 259 269 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 376 383 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 446 465 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 484 495 8.9E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 Gene3D G3DSA:3.40.50.360 41 197 3.5E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00369 Flavodoxin signature 101 112 6.6E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00369 Flavodoxin signature 133 143 6.6E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00369 Flavodoxin signature 157 176 6.6E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 PRINTS PR00369 Flavodoxin signature 53 66 6.6E-11 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 Pfam PF00258 Flavodoxin 54 185 3.2E-29 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Atu0146 c69a7f23407f470001caed32311336ce 589 SUPERFAMILY SSF52343 435 589 7.07E-50 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu0146 c69a7f23407f470001caed32311336ce 589 SUPERFAMILY SSF52218 53 193 1.93E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu0146 c69a7f23407f470001caed32311336ce 589 Gene3D G3DSA:1.20.990.10 269 374 8.2E-62 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 Atu0146 c69a7f23407f470001caed32311336ce 589 Gene3D G3DSA:3.40.50.80 435 589 1.2E-57 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu0546 da716d683e57d8000377b485a3351e04 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 173 188 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 4.1E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 173 193 4.1E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 243 4.1E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 4.1E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 4.1E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 194 215 4.1E-60 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 221 233 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 2.9E-31 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 2.9E-31 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 2.9E-31 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 2.9E-31 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 234 244 2.9E-31 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 2.9E-31 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 Pfam PF00813 FliP family 46 240 4.9E-75 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Atu0546 da716d683e57d8000377b485a3351e04 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 244 8.0E-95 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 Gene3D G3DSA:1.20.1560.10 2 271 3.2E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 Pfam PF00005 ABC transporter 311 457 2.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 SUPERFAMILY SSF52540 289 499 1.13E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 Pfam PF00664 ABC transporter transmembrane region 62 216 2.2E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 Gene3D G3DSA:3.40.50.300 287 507 5.7E-58 T 14-10-2018 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 SMART SM00382 319 503 4.3E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 SUPERFAMILY SSF90123 3 267 3.01E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4089 acdafc4201272bf276a5ab438e11bb8c 508 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 2 499 6.4E-166 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Atu4447 3010b6fca08bda522e4d91eb7a2ddad0 437 Pfam PF01547 Bacterial extracellular solute-binding protein 42 327 2.0E-54 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4447 3010b6fca08bda522e4d91eb7a2ddad0 437 Gene3D G3DSA:3.40.190.10 41 394 1.0E-156 T 14-10-2018 Atu4447 3010b6fca08bda522e4d91eb7a2ddad0 437 SUPERFAMILY SSF53850 10 431 4.84E-84 T 14-10-2018 Atu4447 3010b6fca08bda522e4d91eb7a2ddad0 437 Gene3D G3DSA:3.40.190.10 137 423 1.0E-156 T 14-10-2018 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 SMART SM00729 161 381 6.8E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 Pfam PF04055 Radical SAM superfamily 166 338 6.5E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 Gene3D G3DSA:3.40.50.12160 10 148 1.4E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 11 452 5.8E-149 T 14-10-2018 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 SUPERFAMILY SSF102114 151 386 4.45E-59 T 14-10-2018 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 449 3.3E-147 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 165 185 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 Pfam PF01938 TRAM domain 393 452 2.4E-10 T 14-10-2018 IPR002792 TRAM domain Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 10 454 72.0 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 Gene3D G3DSA:3.80.30.20 160 394 1.2E-83 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Atu0356 323fa8dc7e9bfe914cedb082d1dea238 455 Pfam PF00919 Uncharacterized protein family UPF0004 11 114 2.0E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Atu0721 2897060f2a17a13cc7bdb87f77db5eac 369 Pfam PF04055 Radical SAM superfamily 82 260 7.5E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu0721 2897060f2a17a13cc7bdb87f77db5eac 369 Gene3D G3DSA:3.20.20.70 80 293 1.6E-10 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0721 2897060f2a17a13cc7bdb87f77db5eac 369 SUPERFAMILY SSF102114 73 309 1.83E-13 T 14-10-2018 Atu0721 2897060f2a17a13cc7bdb87f77db5eac 369 SMART SM00729 78 303 4.2E-12 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu3335 4462dd70da7d02bfbfb3442323dc8529 193 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 12 181 7.4E-61 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu3335 4462dd70da7d02bfbfb3442323dc8529 193 SUPERFAMILY SSF50486 9 187 1.18E-60 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Atu3335 4462dd70da7d02bfbfb3442323dc8529 193 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 11 185 30.406 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu3335 4462dd70da7d02bfbfb3442323dc8529 193 Gene3D G3DSA:3.10.300.10 5 193 1.5E-62 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu3335 4462dd70da7d02bfbfb3442323dc8529 193 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 10 185 2.1E-51 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu0511 e3d3798845ccc29edcb3c883ee385c26 111 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.2E-26 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Atu1205 b573ddf6da32793cad5232650617f7fe 424 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Atu1205 b573ddf6da32793cad5232650617f7fe 424 TIGRFAM TIGR02079 THD1: threonine dehydratase 13 424 2.5E-203 T 14-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atu1205 b573ddf6da32793cad5232650617f7fe 424 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 319 2.7E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu1205 b573ddf6da32793cad5232650617f7fe 424 SUPERFAMILY SSF55021 343 419 6.87E-14 T 14-10-2018 Atu1205 b573ddf6da32793cad5232650617f7fe 424 Gene3D G3DSA:3.40.50.1100 22 330 3.0E-98 T 14-10-2018 Atu1205 b573ddf6da32793cad5232650617f7fe 424 SUPERFAMILY SSF53686 12 365 2.49E-88 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu1205 b573ddf6da32793cad5232650617f7fe 424 Gene3D G3DSA:3.40.50.1100 57 157 3.0E-98 T 14-10-2018 Atu1205 b573ddf6da32793cad5232650617f7fe 424 Gene3D G3DSA:3.40.1020.10 332 423 3.1E-9 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atu1205 b573ddf6da32793cad5232650617f7fe 424 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 332 422 3.1E-18 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Atu0283 5b3956ab56b90f5178d71bef9c19a693 149 Pfam PF03061 Thioesterase superfamily 52 125 2.2E-10 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atu0283 5b3956ab56b90f5178d71bef9c19a693 149 SUPERFAMILY SSF54637 3 140 7.74E-27 T 14-10-2018 IPR029069 HotDog domain superfamily Atu0283 5b3956ab56b90f5178d71bef9c19a693 149 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 139 5.1E-15 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Atu0283 5b3956ab56b90f5178d71bef9c19a693 149 Gene3D G3DSA:3.10.129.10 5 143 2.2E-31 T 14-10-2018 Atu3112 845fdcd1e929e9b0a997c769ed3e80d9 291 SUPERFAMILY SSF161098 16 290 4.11E-72 T 14-10-2018 IPR035906 MetI-like superfamily Atu3112 845fdcd1e929e9b0a997c769ed3e80d9 291 Gene3D G3DSA:1.10.3720.10 13 278 5.0E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu3112 845fdcd1e929e9b0a997c769ed3e80d9 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 280 2.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 Pfam PF00005 ABC transporter 279 430 4.6E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 Pfam PF00005 ABC transporter 28 177 4.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 Gene3D G3DSA:3.40.50.300 276 505 4.1E-37 T 14-10-2018 Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 SUPERFAMILY SSF52540 278 495 9.31E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 Gene3D G3DSA:3.40.50.300 3 252 1.5E-59 T 14-10-2018 Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 SMART SM00382 286 487 5.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 SMART SM00382 37 225 7.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 SUPERFAMILY SSF52540 13 236 1.03E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3200 433e3c14d58ded14a6c3ca3aa88dafeb 507 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4691 0c72c48f2503a4eda676b739c6e51701 311 SUPERFAMILY SSF52283 2 133 5.32E-27 T 14-10-2018 Atu4691 0c72c48f2503a4eda676b739c6e51701 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 279 1.9E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu4691 0c72c48f2503a4eda676b739c6e51701 311 Gene3D G3DSA:3.40.50.720 18 304 1.1E-112 T 14-10-2018 Atu4691 0c72c48f2503a4eda676b739c6e51701 311 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 310 4.9E-20 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu4691 0c72c48f2503a4eda676b739c6e51701 311 SUPERFAMILY SSF51735 100 280 3.61E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4691 0c72c48f2503a4eda676b739c6e51701 311 Gene3D G3DSA:3.40.50.720 100 282 1.1E-112 T 14-10-2018 Atu4488 3fd6acedfd4fa0555cecfc6d433c802c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 221 1.2E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4488 3fd6acedfd4fa0555cecfc6d433c802c 222 Gene3D G3DSA:1.10.3720.10 4 218 3.1E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu4488 3fd6acedfd4fa0555cecfc6d433c802c 222 SUPERFAMILY SSF161098 9 202 2.09E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu4339 430a99506400bb86042ef91a8988f701 274 SUPERFAMILY SSF144059 6 263 5.1E-76 T 14-10-2018 Atu4339 430a99506400bb86042ef91a8988f701 274 PIRSF PIRSF029288 2 268 3.2E-87 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type Atu4339 430a99506400bb86042ef91a8988f701 274 Pfam PF07024 ImpE protein 145 261 2.6E-32 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type Atu4339 430a99506400bb86042ef91a8988f701 274 Gene3D G3DSA:1.25.40.10 8 90 1.8E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu5267 43d01c894643c30417155549a01d7727 210 SMART SM00448 6 119 2.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5267 43d01c894643c30417155549a01d7727 210 SUPERFAMILY SSF46894 141 208 9.52E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu5267 43d01c894643c30417155549a01d7727 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.3E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu5267 43d01c894643c30417155549a01d7727 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu5267 43d01c894643c30417155549a01d7727 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu5267 43d01c894643c30417155549a01d7727 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu5267 43d01c894643c30417155549a01d7727 210 Pfam PF00072 Response regulator receiver domain 8 119 2.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu5267 43d01c894643c30417155549a01d7727 210 SMART SM00421 145 202 6.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu5267 43d01c894643c30417155549a01d7727 210 SUPERFAMILY SSF52172 5 137 4.7E-31 T 14-10-2018 IPR011006 CheY-like superfamily Atu5267 43d01c894643c30417155549a01d7727 210 Gene3D G3DSA:3.40.50.12740 6 208 1.1E-56 T 14-10-2018 Atu3603 8f8cf51743bd4f3fdb84548a10d4b2e3 119 Gene3D G3DSA:3.40.50.2300 2 119 3.7E-31 T 14-10-2018 Atu3603 8f8cf51743bd4f3fdb84548a10d4b2e3 119 SUPERFAMILY SSF52172 1 118 1.27E-32 T 14-10-2018 IPR011006 CheY-like superfamily Atu3603 8f8cf51743bd4f3fdb84548a10d4b2e3 119 Pfam PF00072 Response regulator receiver domain 4 113 2.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3603 8f8cf51743bd4f3fdb84548a10d4b2e3 119 SMART SM00448 2 113 1.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu8146 a755c950431033eca04d8f0cdb04b4ad 113 Gene3D G3DSA:1.20.120.20 1 80 2.1E-6 T 14-10-2018 Atu6056 d27f48ed7297a59a4556292824d28196 290 Gene3D G3DSA:3.10.310.10 9 127 1.6E-67 T 14-10-2018 Atu6056 d27f48ed7297a59a4556292824d28196 290 Gene3D G3DSA:3.10.310.10 128 273 1.6E-67 T 14-10-2018 Atu6056 d27f48ed7297a59a4556292824d28196 290 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 9 281 1.2E-48 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu6056 d27f48ed7297a59a4556292824d28196 290 SUPERFAMILY SSF54506 8 290 3.73E-54 T 14-10-2018 Atu6056 d27f48ed7297a59a4556292824d28196 290 PIRSF PIRSF016184 1 290 6.2E-78 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu6056 d27f48ed7297a59a4556292824d28196 290 Pfam PF02567 Phenazine biosynthesis-like protein 9 283 2.4E-44 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 198 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 214 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 226 1.6E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 SUPERFAMILY SSF75516 1 168 5.49E-30 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu2727 b74ed1673e293ad4b4776b76f8742011 245 Gene3D G3DSA:1.10.10.10 182 245 5.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2727 b74ed1673e293ad4b4776b76f8742011 245 Gene3D G3DSA:3.30.450.80 2 172 3.8E-24 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Atu2727 b74ed1673e293ad4b4776b76f8742011 245 SMART SM00421 181 238 1.8E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 Pfam PF00196 Bacterial regulatory proteins, luxR family 184 238 3.7E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 SUPERFAMILY SSF46894 178 244 1.16E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu2727 b74ed1673e293ad4b4776b76f8742011 245 Pfam PF03472 Autoinducer binding domain 17 163 2.1E-28 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Atu4203 b6141640d7f3507e6eb28892d37b9650 236 Pfam PF01161 Phosphatidylethanolamine-binding protein 54 223 4.6E-32 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Atu4203 b6141640d7f3507e6eb28892d37b9650 236 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 100 222 9.8E-18 T 14-10-2018 IPR005247 YbhB/YbcL Atu4203 b6141640d7f3507e6eb28892d37b9650 236 SUPERFAMILY SSF49777 29 223 1.23E-36 T 14-10-2018 IPR036610 PEBP-like superfamily Atu4203 b6141640d7f3507e6eb28892d37b9650 236 Gene3D G3DSA:3.90.280.10 37 226 7.6E-42 T 14-10-2018 IPR036610 PEBP-like superfamily Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 Pfam PF06114 IrrE N-terminal-like domain 191 313 5.0E-19 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 Gene3D G3DSA:1.10.260.40 8 81 8.7E-13 T 14-10-2018 Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 316 468 9.6E-53 T 14-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 Pfam PF01381 Helix-turn-helix 12 66 2.2E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 SUPERFAMILY SSF47413 6 69 1.69E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 SMART SM00530 11 66 9.5E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0608 d85c93317f89c21a0768d2f2998b86c7 471 PIRSF PIRSF019251 1 471 2.9E-140 T 14-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 Atu1656 9467b82dbf5b2a13e2f2445f6f24108c 276 SUPERFAMILY SSF82171 5 271 6.67E-37 T 14-10-2018 Atu1656 9467b82dbf5b2a13e2f2445f6f24108c 276 Pfam PF07676 WD40-like Beta Propeller Repeat 147 182 2.8E-12 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu1656 9467b82dbf5b2a13e2f2445f6f24108c 276 Pfam PF07676 WD40-like Beta Propeller Repeat 111 137 2.5E-5 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu1656 9467b82dbf5b2a13e2f2445f6f24108c 276 Pfam PF07676 WD40-like Beta Propeller Repeat 21 37 0.058 T 14-10-2018 IPR011659 WD40-like Beta Propeller Atu1656 9467b82dbf5b2a13e2f2445f6f24108c 276 Gene3D G3DSA:2.120.10.30 1 276 1.1E-131 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu0860 7e32c975f59a4561224903b89a0e6bf7 520 Pfam PF05872 Bacterial protein of unknown function (DUF853) 16 518 1.3E-239 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal Atu0860 7e32c975f59a4561224903b89a0e6bf7 520 Gene3D G3DSA:3.40.50.300 211 387 2.2E-20 T 14-10-2018 Atu0860 7e32c975f59a4561224903b89a0e6bf7 520 SUPERFAMILY SSF52540 25 391 5.93E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0860 7e32c975f59a4561224903b89a0e6bf7 520 Gene3D G3DSA:3.40.50.300 6 145 8.8E-10 T 14-10-2018 Atu3130 6a573e49b7e1e70705c8f5ed85d5cc62 422 Gene3D G3DSA:3.40.190.10 137 411 6.1E-119 T 14-10-2018 Atu3130 6a573e49b7e1e70705c8f5ed85d5cc62 422 Pfam PF01547 Bacterial extracellular solute-binding protein 44 330 1.6E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3130 6a573e49b7e1e70705c8f5ed85d5cc62 422 SUPERFAMILY SSF53850 24 414 1.37E-48 T 14-10-2018 Atu3130 6a573e49b7e1e70705c8f5ed85d5cc62 422 Gene3D G3DSA:3.40.190.10 31 369 6.1E-119 T 14-10-2018 Atu4524 4a6669ef4c181c46428bd31e48dc42e3 264 Gene3D G3DSA:1.10.3720.10 42 255 9.8E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu4524 4a6669ef4c181c46428bd31e48dc42e3 264 SUPERFAMILY SSF161098 48 247 4.84E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu4524 4a6669ef4c181c46428bd31e48dc42e3 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 262 7.4E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu8165 f64891306deae58b1a8e90d3bf3933aa 109 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 7 96 5.3E-27 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 Atu8165 f64891306deae58b1a8e90d3bf3933aa 109 SUPERFAMILY SSF141255 6 97 2.75E-33 T 14-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 Atu8165 f64891306deae58b1a8e90d3bf3933aa 109 SMART SM00992 5 104 3.5E-53 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 Atu8165 f64891306deae58b1a8e90d3bf3933aa 109 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 5 104 6.7E-43 T 14-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 Atu8165 f64891306deae58b1a8e90d3bf3933aa 109 Gene3D G3DSA:2.30.30.390 4 106 2.6E-30 T 14-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 Atu4204 b811c3f34f956c36b5cda1b16698ae78 246 Pfam PF12833 Helix-turn-helix domain 163 239 1.8E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4204 b811c3f34f956c36b5cda1b16698ae78 246 SMART SM00342 156 238 1.8E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4204 b811c3f34f956c36b5cda1b16698ae78 246 SUPERFAMILY SSF46689 192 240 9.86E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4204 b811c3f34f956c36b5cda1b16698ae78 246 SUPERFAMILY SSF51182 5 53 3.9E-6 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4204 b811c3f34f956c36b5cda1b16698ae78 246 Gene3D G3DSA:1.10.10.60 136 245 2.7E-21 T 14-10-2018 Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 186 20.435 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 Gene3D G3DSA:3.30.160.100 1 97 9.2E-18 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 1.9E-16 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 SUPERFAMILY SSF69754 3 101 2.09E-25 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 Gene3D G3DSA:3.30.505.50 140 185 4.0E-9 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 128 181 8.5E-14 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Atu0331 f7530a8467f8d9db7c4676f8ab40eaaa 190 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 9.1E-16 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Atu0925 8f2ebf34d87807098c7ca6ad604d133a 182 PIRSF PIRSF010244 1 182 1.4E-83 T 14-10-2018 IPR014456 Uncharacterised conserved protein UCP010244, integral membrane protein Atu4602 3b1a1a5f2e6114085fb97cd39a2d9bc9 129 Pfam PF01527 Transposase 16 94 3.1E-26 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu4602 3b1a1a5f2e6114085fb97cd39a2d9bc9 129 SUPERFAMILY SSF46689 16 108 2.15E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4891 3b1a1a5f2e6114085fb97cd39a2d9bc9 129 Pfam PF01527 Transposase 16 94 3.1E-26 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu4891 3b1a1a5f2e6114085fb97cd39a2d9bc9 129 SUPERFAMILY SSF46689 16 108 2.15E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3051 0d73982776779ee343547d15f3817ef8 236 Pfam PF00106 short chain dehydrogenase 9 195 3.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 Gene3D G3DSA:3.40.50.720 2 230 4.2E-46 T 14-10-2018 Atu3051 0d73982776779ee343547d15f3817ef8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3051 0d73982776779ee343547d15f3817ef8 236 SUPERFAMILY SSF51735 4 220 1.92E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 Gene3D G3DSA:3.90.1530.30 119 178 4.0E-11 T 14-10-2018 Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 102 270 1.3E-30 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 Pfam PF02195 ParB-like nuclease domain 102 191 3.4E-18 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 SMART SM00470 100 192 2.3E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 TIGRFAM TIGR03454 partition_RepB: plasmid partitioning protein RepB 36 359 2.9E-110 T 14-10-2018 IPR017819 Plasmid partitioning protein, RepB Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 SUPERFAMILY SSF109709 186 269 7.85E-6 T 14-10-2018 Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 Pfam PF07506 RepB plasmid partitioning protein 194 359 6.7E-31 T 14-10-2018 IPR011111 RepB plasmid partition Atu6044 46ba71eb9bd1ea20b35dd976a7f54d06 370 SUPERFAMILY SSF110849 100 194 2.09E-16 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu3368 2758ea288880efc5f7ad00ca934acdb8 365 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 322 1.9E-63 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu3368 2758ea288880efc5f7ad00ca934acdb8 365 PIRSF PIRSF039026 1 356 2.1E-126 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Atu3368 2758ea288880efc5f7ad00ca934acdb8 365 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 6.5E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atu3368 2758ea288880efc5f7ad00ca934acdb8 365 Gene3D G3DSA:3.40.190.170 33 337 1.1E-126 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu3368 2758ea288880efc5f7ad00ca934acdb8 365 Gene3D G3DSA:3.40.190.10 153 324 1.1E-126 T 14-10-2018 Atu3034 ad146482aa1b6823de34aaa55a49fbf2 182 SUPERFAMILY SSF53067 6 164 6.56E-37 T 14-10-2018 Atu3034 ad146482aa1b6823de34aaa55a49fbf2 182 Gene3D G3DSA:3.30.420.40 143 155 1.1E-35 T 14-10-2018 Atu3034 ad146482aa1b6823de34aaa55a49fbf2 182 Gene3D G3DSA:3.30.420.40 7 142 1.1E-35 T 14-10-2018 Atu3034 ad146482aa1b6823de34aaa55a49fbf2 182 Pfam PF00480 ROK family 7 160 3.4E-27 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu0353 484a581719ca722155e5f8bdebbe799a 164 Gene3D G3DSA:3.40.630.30 12 164 4.6E-32 T 14-10-2018 Atu0353 484a581719ca722155e5f8bdebbe799a 164 SUPERFAMILY SSF55729 12 163 4.8E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0353 484a581719ca722155e5f8bdebbe799a 164 Pfam PF00583 Acetyltransferase (GNAT) family 69 136 7.3E-12 T 14-10-2018 IPR000182 GNAT domain Atu3604 ca036c6384c18285fc10a8db1af1f57b 180 Gene3D G3DSA:3.40.50.2020 6 180 2.4E-56 T 14-10-2018 Atu3604 ca036c6384c18285fc10a8db1af1f57b 180 Pfam PF00156 Phosphoribosyl transferase domain 16 162 1.2E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu3604 ca036c6384c18285fc10a8db1af1f57b 180 SUPERFAMILY SSF53271 9 177 1.21E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu3604 ca036c6384c18285fc10a8db1af1f57b 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 14 176 5.2E-50 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 SMART SM00996 6 465 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 SMART SM00997 227 386 1.3E-110 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 227 386 7.3E-83 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 458 6.4E-180 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 Gene3D G3DSA:3.40.50.1480 9 466 4.6E-235 T 14-10-2018 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 Gene3D G3DSA:3.40.50.720 229 386 4.6E-235 T 14-10-2018 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 458 47.352 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 PIRSF PIRSF001109 1 466 1.2E-185 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 SUPERFAMILY SSF51735 227 386 1.26E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 249 266 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 465 9.7E-142 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu0029 5bab0aeb91883fbb00339f9e9767d749 466 SUPERFAMILY SSF52283 5 466 1.42E-111 T 14-10-2018 Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 9 256 3.3E-91 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 173 256 2.5E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 256 39.449 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 Pfam PF00753 Metallo-beta-lactamase superfamily 22 172 1.3E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 SMART SM00849 14 172 2.8E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 SUPERFAMILY SSF56281 5 256 3.92E-68 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 Gene3D G3DSA:3.60.15.10 4 256 1.9E-81 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu3614 3140e02f5f49aaf594358165b7fac7fa 256 PIRSF PIRSF005457 1 256 5.0E-98 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Atu0771 8209cca1bbc080a7aabb6a45e1bb764b 291 SUPERFAMILY SSF81452 5 283 3.77E-97 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0771 8209cca1bbc080a7aabb6a45e1bb764b 291 Pfam PF00510 Cytochrome c oxidase subunit III 9 283 2.0E-90 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0771 8209cca1bbc080a7aabb6a45e1bb764b 291 Gene3D G3DSA:1.10.287.70 4 85 1.0E-30 T 14-10-2018 Atu0771 8209cca1bbc080a7aabb6a45e1bb764b 291 Gene3D G3DSA:1.20.120.80 86 284 8.2E-79 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu8154 2c2a6b05cd6efac8b2a50af3f142e26f 124 Gene3D G3DSA:3.30.2310.20 1 115 7.8E-15 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu8154 2c2a6b05cd6efac8b2a50af3f142e26f 124 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 110 2.6E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu0473 4f2626c89a0fababe442987a8712ed46 304 Pfam PF14339 Domain of unknown function (DUF4394) 76 298 6.7E-69 T 14-10-2018 IPR025507 Domain of unknown function DUF4394 Atu0473 4f2626c89a0fababe442987a8712ed46 304 SUPERFAMILY SSF50969 72 301 7.38E-6 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Atu6174 fd7a2b4acb8d11675267d5c7af32b507 237 Pfam PF04335 VirB8 protein 23 227 1.7E-45 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 Atu6174 fd7a2b4acb8d11675267d5c7af32b507 237 SUPERFAMILY SSF54427 92 230 3.94E-38 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu6174 fd7a2b4acb8d11675267d5c7af32b507 237 Gene3D G3DSA:3.10.450.230 90 237 1.4E-56 T 14-10-2018 Atu1775 9834bd50dd4cb9f7b1a5a2e225bec48c 222 SUPERFAMILY SSF52833 4 211 3.96E-51 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1775 9834bd50dd4cb9f7b1a5a2e225bec48c 222 Gene3D G3DSA:3.40.30.10 1 211 6.9E-71 T 14-10-2018 Atu1775 9834bd50dd4cb9f7b1a5a2e225bec48c 222 Pfam PF01323 DSBA-like thioredoxin domain 5 207 1.5E-47 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Atu0607 0f496f399e565af680e66df97d24517d 429 PIRSF PIRSF001362 2 427 4.4E-236 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Atu0607 0f496f399e565af680e66df97d24517d 429 Pfam PF00463 Isocitrate lyase family 14 243 1.9E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Atu0607 0f496f399e565af680e66df97d24517d 429 ProSitePatterns PS00161 Isocitrate lyase signature. 183 188 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Atu0607 0f496f399e565af680e66df97d24517d 429 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 14 243 2.4E-94 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Atu0607 0f496f399e565af680e66df97d24517d 429 SUPERFAMILY SSF51621 12 424 1.39E-149 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Atu0607 0f496f399e565af680e66df97d24517d 429 Gene3D G3DSA:3.20.20.60 1 407 3.2E-186 T 14-10-2018 Atu4427 a38a12ab08f575936c11c8b381e71d67 233 Pfam PF03796 DnaB-like helicase C terminal domain 57 115 3.7E-7 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Atu4427 a38a12ab08f575936c11c8b381e71d67 233 Gene3D G3DSA:3.40.50.300 128 209 1.4E-5 T 14-10-2018 Atu4427 a38a12ab08f575936c11c8b381e71d67 233 SUPERFAMILY SSF52540 60 210 1.38E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4427 a38a12ab08f575936c11c8b381e71d67 233 Gene3D G3DSA:3.40.50.300 51 127 2.4E-11 T 14-10-2018 Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 Pfam PF00691 OmpA family 367 464 6.3E-13 T 14-10-2018 IPR006665 OmpA-like domain Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 Pfam PF09850 Type VI secretion system protein DotU 75 275 2.1E-55 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 SUPERFAMILY SSF103088 356 470 4.97E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 335 470 4.2E-50 T 14-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 Gene3D G3DSA:1.25.40.590 72 226 8.3E-45 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 74 282 3.1E-64 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU Atu4333 319063e8848fa1277e1c46cda9d0f0a0 501 Gene3D G3DSA:3.30.1330.60 324 474 2.2E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu4454 37756212a795eb2585636ed9f5572a09 265 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 62 5.2E-9 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Atu4454 37756212a795eb2585636ed9f5572a09 265 Gene3D G3DSA:1.10.10.10 1 65 5.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4454 37756212a795eb2585636ed9f5572a09 265 SUPERFAMILY SSF46689 5 62 1.0E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3090 cba4976e401498ec1a95c5c314aecf4a 326 Pfam PF00929 Exonuclease 74 228 1.1E-14 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu3090 cba4976e401498ec1a95c5c314aecf4a 326 SUPERFAMILY SSF53098 73 234 2.87E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu3090 cba4976e401498ec1a95c5c314aecf4a 326 SMART SM00479 72 237 7.4E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Atu3090 cba4976e401498ec1a95c5c314aecf4a 326 Gene3D G3DSA:3.30.420.10 71 238 6.6E-26 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu0558 fbf509f84b1dcc8c95ec26cbbb529f3c 244 Pfam PF00460 Flagella basal body rod protein 5 35 3.1E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Atu0558 fbf509f84b1dcc8c95ec26cbbb529f3c 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 235 8.3E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Atu0558 fbf509f84b1dcc8c95ec26cbbb529f3c 244 SUPERFAMILY SSF117143 79 145 1.96E-14 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Atu0558 fbf509f84b1dcc8c95ec26cbbb529f3c 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 131 4.2E-39 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Atu0558 fbf509f84b1dcc8c95ec26cbbb529f3c 244 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 220 2.3E-57 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Atu2265 1c2c092625518428c76d7022414f78c8 392 TIGRFAM TIGR00843 benE: benzoate transporter 8 382 1.1E-77 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Atu2265 1c2c092625518428c76d7022414f78c8 392 Pfam PF03594 Benzoate membrane transport protein 4 384 2.7E-104 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Pfam PF01568 Molydopterin dinucleotide binding domain 720 827 1.3E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Gene3D G3DSA:3.40.228.10 179 708 0.0 T 14-10-2018 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 SMART SM00926 43 97 1.3E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Gene3D G3DSA:3.30.200.210 43 671 0.0 T 14-10-2018 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Gene3D G3DSA:2.40.40.20 709 833 1.4E-45 T 14-10-2018 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 SUPERFAMILY SSF53706 40 656 1.57E-198 T 14-10-2018 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Gene3D G3DSA:3.40.50.740 100 628 0.0 T 14-10-2018 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 3 833 31.534 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 65 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 5 833 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Pfam PF00384 Molybdopterin oxidoreductase 100 573 4.5E-90 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 SUPERFAMILY SSF50692 689 832 3.39E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 40 4.2E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atu4408 18cf366829fbf71db6a514cbb45b5e8f 834 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 96 8.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4288 ef713c83b1d600b0dd562e26bd419973 299 SUPERFAMILY SSF53850 95 298 2.64E-46 T 14-10-2018 Atu4288 ef713c83b1d600b0dd562e26bd419973 299 Pfam PF03466 LysR substrate binding domain 94 298 3.2E-44 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4288 ef713c83b1d600b0dd562e26bd419973 299 Gene3D G3DSA:1.10.10.10 7 92 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4288 ef713c83b1d600b0dd562e26bd419973 299 Gene3D G3DSA:3.40.190.10 97 298 8.6E-61 T 14-10-2018 Atu4288 ef713c83b1d600b0dd562e26bd419973 299 Gene3D G3DSA:3.40.190.10 168 271 8.6E-61 T 14-10-2018 Atu4288 ef713c83b1d600b0dd562e26bd419973 299 SUPERFAMILY SSF46785 5 117 8.45E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4288 ef713c83b1d600b0dd562e26bd419973 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 2.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0939 3213110da1f704c945ae61ec61d6a54a 88 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 14 52 3.3E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atu0939 3213110da1f704c945ae61ec61d6a54a 88 SUPERFAMILY SSF89447 4 65 1.92E-10 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atu0939 3213110da1f704c945ae61ec61d6a54a 88 SMART SM00966 8 53 4.6E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Atu0939 3213110da1f704c945ae61ec61d6a54a 88 Gene3D G3DSA:2.10.260.10 1 87 4.5E-12 T 14-10-2018 Atu2111 205807f490c234ae19b70e838ff17d93 395 Pfam PF01266 FAD dependent oxidoreductase 6 373 8.0E-33 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu2111 205807f490c234ae19b70e838ff17d93 395 SUPERFAMILY SSF51905 4 386 1.42E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2111 205807f490c234ae19b70e838ff17d93 395 Gene3D G3DSA:3.30.9.10 65 337 7.9E-60 T 14-10-2018 Atu2111 205807f490c234ae19b70e838ff17d93 395 Gene3D G3DSA:3.50.50.60 6 380 7.9E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 Pfam PF00664 ABC transporter transmembrane region 2 255 9.1E-12 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 1 536 1.5E-238 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 SUPERFAMILY SSF90123 1 294 4.84E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 Gene3D G3DSA:3.40.50.300 304 545 1.0E-65 T 14-10-2018 Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 SUPERFAMILY SSF52540 301 534 1.41E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 Pfam PF00005 ABC transporter 326 474 1.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 SMART SM00382 335 522 4.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 Gene3D G3DSA:1.20.1560.10 1 293 5.7E-32 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu3322 3e6381ea594602ebcc7fa8982d6b2dba 551 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 SUPERFAMILY SSF53067 245 485 8.97E-54 T 14-10-2018 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 349 369 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 Gene3D G3DSA:3.30.420.40 236 489 1.6E-62 T 14-10-2018 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 SUPERFAMILY SSF53067 1 246 2.14E-50 T 14-10-2018 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 PIRSF PIRSF000538 1 489 1.3E-93 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 Gene3D G3DSA:3.30.420.40 1 234 2.8E-60 T 14-10-2018 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 4.4E-50 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu3874 c37763d41462f0902badd2e8917dcf8a 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 436 1.4E-25 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atu4765 f068fb243ff6a0ec5669abdc187e061d 507 Gene3D G3DSA:1.25.40.80 132 318 7.2E-127 T 14-10-2018 Atu4765 f068fb243ff6a0ec5669abdc187e061d 507 SUPERFAMILY SSF48173 229 488 6.28E-57 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Atu4765 f068fb243ff6a0ec5669abdc187e061d 507 Gene3D G3DSA:1.10.579.10 322 442 1.3E-57 T 14-10-2018 Atu4765 f068fb243ff6a0ec5669abdc187e061d 507 Gene3D G3DSA:3.40.50.620 6 229 7.2E-127 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu4765 f068fb243ff6a0ec5669abdc187e061d 507 Gene3D G3DSA:1.10.10.1710 443 507 4.8E-29 T 14-10-2018 Atu4765 f068fb243ff6a0ec5669abdc187e061d 507 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 6.2E-82 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 6.4E-30 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 SUPERFAMILY SSF52540 17 261 6.29E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 Pfam PF00005 ABC transporter 48 191 1.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 1.2E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 Gene3D G3DSA:3.40.50.300 15 339 4.2E-96 T 14-10-2018 Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4701 9793f8aa837ab6c38a98b377cf0bd4dd 340 SMART SM00382 56 240 4.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3824 6ef6ec80f08e99db7213a4a0c93c3649 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 322 4.7E-188 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 Atu3824 6ef6ec80f08e99db7213a4a0c93c3649 327 PIRSF PIRSF034367 1 327 1.4E-203 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 Atu2016 d02fb73a41ebb39e13baaa777842d591 149 SUPERFAMILY SSF102546 1 146 4.97E-42 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Atu2016 d02fb73a41ebb39e13baaa777842d591 149 Gene3D G3DSA:3.40.1650.10 1 149 1.1E-53 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Atu2016 d02fb73a41ebb39e13baaa777842d591 149 Pfam PF05025 RbsD / FucU transport protein family 3 146 1.1E-33 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 Pfam PF13353 4Fe-4S single cluster domain 110 179 2.0E-6 T 14-10-2018 Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 Pfam PF04055 Radical SAM superfamily 111 259 1.7E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 TIGRFAM TIGR03822 AblA_like_2: lysine-2,3-aminomutase-related protein 16 335 4.7E-180 T 14-10-2018 IPR022447 Lysine-2,3-aminomutase-related Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 Gene3D G3DSA:3.20.20.70 43 329 9.5E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 PIRSF PIRSF004911 3 360 3.2E-126 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 323 2.0E-82 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Atu2555 ddff0a7ca693635d6c7c264a4e357890 363 SUPERFAMILY SSF102114 93 328 1.96E-35 T 14-10-2018 Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 1.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 1.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 1.0E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 SMART SM00347 36 134 2.4E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 SUPERFAMILY SSF46785 17 148 5.12E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 Pfam PF01047 MarR family 43 101 2.0E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu4864 5e513bd827a3f217d551ec06bebd70bb 150 Gene3D G3DSA:1.10.10.10 11 149 5.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 Gene3D G3DSA:1.10.8.400 206 261 8.5E-18 T 14-10-2018 Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 SUPERFAMILY SSF51735 10 257 6.23E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 1.5E-91 T 14-10-2018 Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 Gene3D G3DSA:3.40.50.720 12 204 1.6E-43 T 14-10-2018 Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu0757 c76f14448cef2d2a8fc7b1724f0614a0 272 PIRSF PIRSF000094 5 263 2.7E-115 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Atu6031 5cf3f9da5dc59ff915f06bebd11b599a 438 Gene3D G3DSA:2.40.128.260 254 431 3.3E-61 T 14-10-2018 Atu6031 5cf3f9da5dc59ff915f06bebd11b599a 438 Pfam PF03743 Bacterial conjugation TrbI-like protein 251 433 1.2E-62 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Atu6031 5cf3f9da5dc59ff915f06bebd11b599a 438 Gene3D G3DSA:1.10.1200.160 377 412 3.3E-61 T 14-10-2018 Atu2767 63a6a8755c0570c4b6f4d08af68e5348 458 Gene3D G3DSA:1.20.1250.20 243 457 8.0E-10 T 14-10-2018 Atu2767 63a6a8755c0570c4b6f4d08af68e5348 458 Gene3D G3DSA:1.20.1250.20 15 227 5.1E-10 T 14-10-2018 Atu2767 63a6a8755c0570c4b6f4d08af68e5348 458 Pfam PF11700 Vacuole effluxer Atg22 like 61 454 1.2E-27 T 14-10-2018 IPR024671 Autophagy-related protein 22-like Atu2767 63a6a8755c0570c4b6f4d08af68e5348 458 SUPERFAMILY SSF103473 30 456 2.49E-29 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1219 6498b4ed43d1bec29f10aa12e7786ae1 98 Pfam PF06169 Protein of unknown function (DUF982) 15 86 9.4E-23 T 14-10-2018 IPR010385 Protein of unknown function DUF982 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 421 3.2E-125 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 Gene3D G3DSA:3.30.2130.10 264 425 1.5E-55 T 14-10-2018 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 PIRSF PIRSF000726 54 425 2.1E-121 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 PIRSF PIRSF000726 1 63 1.3E-18 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 Pfam PF00696 Amino acid kinase family 3 238 6.4E-45 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 421 2.0E-126 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 Pfam PF13840 ACT domain 356 418 1.0E-13 T 14-10-2018 IPR027795 CASTOR, ACT domain Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 Gene3D G3DSA:3.40.1160.10 1 263 3.9E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 SUPERFAMILY SSF55021 267 345 1.71E-20 T 14-10-2018 Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 Pfam PF01842 ACT domain 285 343 1.4E-13 T 14-10-2018 IPR002912 ACT domain Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 SUPERFAMILY SSF53633 3 262 5.5E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Atu4172 ef3ddc6d3c0e88bfdc26eaf912c67e3d 425 SUPERFAMILY SSF55021 354 423 1.53E-20 T 14-10-2018 Atu1512 48fb33b3986c17619afb07f3f742b773 173 SUPERFAMILY SSF50249 4 173 1.54E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1512 48fb33b3986c17619afb07f3f742b773 173 Gene3D G3DSA:2.40.50.140 2 115 8.4E-48 T 14-10-2018 Atu1512 48fb33b3986c17619afb07f3f742b773 173 Pfam PF00436 Single-strand binding protein family 5 105 3.8E-39 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Atu1512 48fb33b3986c17619afb07f3f742b773 173 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 36.02 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atu1512 48fb33b3986c17619afb07f3f742b773 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 173 3.6E-49 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Atu1441 2c19224a5e1ccf1c75309b5f40d5883e 151 Gene3D G3DSA:3.30.530.20 2 148 6.2E-41 T 14-10-2018 IPR023393 START-like domain superfamily Atu1441 2c19224a5e1ccf1c75309b5f40d5883e 151 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 140 7.6E-30 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Atu1441 2c19224a5e1ccf1c75309b5f40d5883e 151 SUPERFAMILY SSF55961 1 148 1.05E-37 T 14-10-2018 Atu3012 8493092aa70f2b78e085477ecfad35de 229 Pfam PF11876 Protein of unknown function (DUF3396) 80 204 2.8E-15 T 14-10-2018 IPR021815 Protein of unknown function DUF3396 Atu4116 c3e9cfe9f7726038182bdb5942c63b8b 279 SMART SM00382 32 231 8.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4116 c3e9cfe9f7726038182bdb5942c63b8b 279 Pfam PF00005 ABC transporter 24 181 4.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4116 c3e9cfe9f7726038182bdb5942c63b8b 279 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4116 c3e9cfe9f7726038182bdb5942c63b8b 279 SUPERFAMILY SSF52540 3 253 3.51E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4116 c3e9cfe9f7726038182bdb5942c63b8b 279 Gene3D G3DSA:3.40.50.300 1 271 9.3E-82 T 14-10-2018 Atu4116 c3e9cfe9f7726038182bdb5942c63b8b 279 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 266 2.6E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 Pfam PF12848 ABC transporter 224 295 7.6E-15 T 14-10-2018 IPR032781 ABC-transporter extension domain Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 SMART SM00382 31 239 1.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 SMART SM00382 342 512 3.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 Pfam PF00005 ABC transporter 22 185 2.0E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 Gene3D G3DSA:3.40.50.300 280 546 5.9E-72 T 14-10-2018 Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 4 547 3.3E-281 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 Pfam PF00005 ABC transporter 334 467 8.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 SUPERFAMILY SSF52540 9 236 8.88E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 SUPERFAMILY SSF52540 304 516 1.27E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2125 68d891b0f75c67e8832bbbe783f7d05c 549 Gene3D G3DSA:3.40.50.300 3 279 9.7E-74 T 14-10-2018 Atu2195 077e60b8931a7cd59c08c9ace1462a46 368 Pfam PF01699 Sodium/calcium exchanger protein 39 185 4.2E-12 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Atu2195 077e60b8931a7cd59c08c9ace1462a46 368 Pfam PF01699 Sodium/calcium exchanger protein 223 365 1.0E-6 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Atu2195 077e60b8931a7cd59c08c9ace1462a46 368 Gene3D G3DSA:1.20.58.1130 47 255 2.3E-8 T 14-10-2018 Atu2195 077e60b8931a7cd59c08c9ace1462a46 368 Gene3D G3DSA:1.20.1420.30 68 357 2.3E-8 T 14-10-2018 Atu3870 30a0fe1688550067157cf2ccb36c402c 337 Gene3D G3DSA:3.40.50.720 101 296 1.7E-129 T 14-10-2018 Atu3870 30a0fe1688550067157cf2ccb36c402c 337 SUPERFAMILY SSF52283 2 134 7.94E-40 T 14-10-2018 Atu3870 30a0fe1688550067157cf2ccb36c402c 337 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 327 5.3E-32 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu3870 30a0fe1688550067157cf2ccb36c402c 337 SUPERFAMILY SSF51735 101 297 1.58E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3870 30a0fe1688550067157cf2ccb36c402c 337 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu3870 30a0fe1688550067157cf2ccb36c402c 337 Gene3D G3DSA:3.40.50.720 2 316 1.7E-129 T 14-10-2018 Atu3870 30a0fe1688550067157cf2ccb36c402c 337 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 296 3.8E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu3870 30a0fe1688550067157cf2ccb36c402c 337 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Atu4699 fee6f8845d1b2592cfaae6671c211e11 497 SUPERFAMILY SSF51338 25 82 2.5E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4699 fee6f8845d1b2592cfaae6671c211e11 497 Pfam PF01979 Amidohydrolase family 116 441 5.4E-23 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu4699 fee6f8845d1b2592cfaae6671c211e11 497 SUPERFAMILY SSF51556 114 392 3.21E-52 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu4699 fee6f8845d1b2592cfaae6671c211e11 497 Gene3D G3DSA:3.20.20.140 73 393 1.2E-85 T 14-10-2018 Atu4699 fee6f8845d1b2592cfaae6671c211e11 497 SUPERFAMILY SSF51338 370 470 1.49E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4699 fee6f8845d1b2592cfaae6671c211e11 497 Gene3D G3DSA:2.30.40.10 30 441 1.2E-85 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu0708 7093a56126e74f1c25f48ecfdb2cd05a 407 Pfam PF13379 NMT1-like family 2 263 1.8E-44 T 14-10-2018 Atu0708 7093a56126e74f1c25f48ecfdb2cd05a 407 Gene3D G3DSA:3.40.190.10 9 399 1.3E-92 T 14-10-2018 Atu0708 7093a56126e74f1c25f48ecfdb2cd05a 407 SUPERFAMILY SSF53850 5 251 6.08E-18 T 14-10-2018 Atu0708 7093a56126e74f1c25f48ecfdb2cd05a 407 Gene3D G3DSA:3.40.190.10 93 215 1.3E-92 T 14-10-2018 Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 150 6.2E-39 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 SUPERFAMILY SSF48179 151 277 5.78E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 SUPERFAMILY SSF51735 1 149 7.32E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 Gene3D G3DSA:3.40.50.720 1 150 3.7E-43 T 14-10-2018 Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 Gene3D G3DSA:1.10.1040.10 151 279 3.0E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 153 270 3.6E-26 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Atu3159 550baa3b4fdf25bc55b8274f8645c4a8 294 PIRSF PIRSF000103 1 281 1.0E-69 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atu1400 f237bdf7bd87b7efcb44f8438589e987 328 Gene3D G3DSA:3.40.50.720 38 323 2.9E-67 T 14-10-2018 Atu1400 f237bdf7bd87b7efcb44f8438589e987 328 SUPERFAMILY SSF52283 4 131 1.08E-6 T 14-10-2018 Atu1400 f237bdf7bd87b7efcb44f8438589e987 328 SMART SM00997 120 272 0.005 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Atu1400 f237bdf7bd87b7efcb44f8438589e987 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 292 7.5E-54 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu1400 f237bdf7bd87b7efcb44f8438589e987 328 Gene3D G3DSA:3.40.50.720 99 292 2.9E-67 T 14-10-2018 Atu1400 f237bdf7bd87b7efcb44f8438589e987 328 SUPERFAMILY SSF51735 99 291 4.47E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2824 75240237fddf3bb27961e6a95434573f 546 Gene3D G3DSA:2.70.98.70 311 442 1.5E-5 T 14-10-2018 Atu2824 75240237fddf3bb27961e6a95434573f 546 Pfam PF07940 Heparinase II/III-like protein 295 540 2.0E-53 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 Atu2824 75240237fddf3bb27961e6a95434573f 546 Gene3D G3DSA:1.50.10.100 42 297 3.8E-21 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Atu3926 b1fb559bc652458d010c0198a20610a3 131 SUPERFAMILY SSF55298 10 129 6.6E-36 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu3926 b1fb559bc652458d010c0198a20610a3 131 Gene3D G3DSA:3.30.1330.40 3 130 4.1E-38 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu3926 b1fb559bc652458d010c0198a20610a3 131 Pfam PF01042 Endoribonuclease L-PSP 21 127 1.4E-29 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 Gene3D G3DSA:3.40.50.720 2 247 4.4E-73 T 14-10-2018 Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.6E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 SUPERFAMILY SSF51735 4 247 2.74E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3813 a0ff1a908d7be2ca3220e6fe3606f9ae 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 3.4E-55 T 14-10-2018 Atu0916 fe94f72104f18490a4d33d953ef87874 142 Gene3D G3DSA:1.10.10.1550 62 118 3.6E-33 T 14-10-2018 Atu0916 fe94f72104f18490a4d33d953ef87874 142 Pfam PF05443 ROS/MUCR transcriptional regulator protein 13 135 3.8E-51 T 14-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 Atu2682 870a32014f0ac015921558881f83c1bd 260 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 27 255 2.1E-65 T 14-10-2018 IPR006214 Bax inhibitor 1-related Atu1524 2ac64ae2249a06b549366d1bc9046af4 343 Gene3D G3DSA:3.20.20.100 15 342 6.5E-119 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu1524 2ac64ae2249a06b549366d1bc9046af4 343 Pfam PF00248 Aldo/keto reductase family 28 327 8.6E-71 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu1524 2ac64ae2249a06b549366d1bc9046af4 343 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 5.0E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Atu1524 2ac64ae2249a06b549366d1bc9046af4 343 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 283 296 5.0E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Atu1524 2ac64ae2249a06b549366d1bc9046af4 343 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 282 5.0E-5 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Atu1524 2ac64ae2249a06b549366d1bc9046af4 343 SUPERFAMILY SSF51430 13 330 5.76E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu5067 130af85041b12dc0bd94399f4af107b2 297 PIRSF PIRSF001365 1 297 2.2E-76 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.2E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 1.2E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 1.2E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 1.2E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 SMART SM01130 1 291 1.2E-81 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Atu5067 130af85041b12dc0bd94399f4af107b2 297 Pfam PF00701 Dihydrodipicolinate synthetase family 3 288 3.2E-55 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5067 130af85041b12dc0bd94399f4af107b2 297 SUPERFAMILY SSF51569 5 293 2.3E-72 T 14-10-2018 Atu5067 130af85041b12dc0bd94399f4af107b2 297 Gene3D G3DSA:3.20.20.70 1 293 2.2E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2143 6a63f9bf4fdd081fe4dd764adadc0825 504 Gene3D G3DSA:1.20.1740.10 24 492 6.2E-52 T 14-10-2018 Atu2143 6a63f9bf4fdd081fe4dd764adadc0825 504 PIRSF PIRSF006060 8 503 1.2E-77 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atu2143 6a63f9bf4fdd081fe4dd764adadc0825 504 Pfam PF13520 Amino acid permease 28 465 1.7E-34 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atu3947 94382aad15621f6ddfa73d9afea8a4e7 436 Gene3D G3DSA:3.50.50.60 38 389 5.8E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3947 94382aad15621f6ddfa73d9afea8a4e7 436 SUPERFAMILY SSF51905 37 414 2.46E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3947 94382aad15621f6ddfa73d9afea8a4e7 436 Pfam PF01266 FAD dependent oxidoreductase 38 390 5.3E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3947 94382aad15621f6ddfa73d9afea8a4e7 436 Gene3D G3DSA:3.30.9.10 128 354 5.8E-65 T 14-10-2018 Atu3726 e95a0b975f7cf2545b224ac257403475 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 324 2.3E-132 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 Atu3726 e95a0b975f7cf2545b224ac257403475 333 Pfam PF00296 Luciferase-like monooxygenase 16 300 1.2E-34 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3726 e95a0b975f7cf2545b224ac257403475 333 Gene3D G3DSA:3.20.20.30 1 328 1.1E-93 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3726 e95a0b975f7cf2545b224ac257403475 333 SUPERFAMILY SSF51679 2 324 5.1E-87 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 SUPERFAMILY SSF46785 10 69 1.22E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 Pfam PF01037 Lrp/AsnC ligand binding domain 77 149 1.6E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 SUPERFAMILY SSF54909 72 154 1.34E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 Gene3D G3DSA:1.10.10.10 1 63 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 SMART SM00344 10 119 7.3E-54 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 Gene3D G3DSA:3.30.70.920 64 147 4.1E-25 T 14-10-2018 Atu4159 63d47afe8258bfe9e5e12ea3b6f8440a 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 7.5E-17 T 14-10-2018 Atu1221 2e62952611a3fa51232b38c76c2a71a4 147 SUPERFAMILY SSF54001 57 147 5.4E-5 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu1221 2e62952611a3fa51232b38c76c2a71a4 147 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 23 146 1.1E-30 T 14-10-2018 IPR013423 Conserved hypothetical protein CHP02594 Atu1221 2e62952611a3fa51232b38c76c2a71a4 147 Gene3D G3DSA:3.90.1720.10 11 146 6.7E-7 T 14-10-2018 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 Gene3D G3DSA:1.10.10.10 5 93 4.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5208 b1e0471920f6ee800c036f31db6be44b 299 Gene3D G3DSA:3.40.190.10 166 267 1.7E-50 T 14-10-2018 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 SUPERFAMILY SSF46785 9 113 6.9E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5208 b1e0471920f6ee800c036f31db6be44b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 SUPERFAMILY SSF53850 92 297 6.11E-39 T 14-10-2018 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 Gene3D G3DSA:3.40.190.10 94 290 1.7E-50 T 14-10-2018 Atu5208 b1e0471920f6ee800c036f31db6be44b 299 Pfam PF03466 LysR substrate binding domain 90 294 2.5E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 301 1.1E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 SUPERFAMILY SSF111369 59 312 5.62E-10 T 14-10-2018 Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 Gene3D G3DSA:1.10.287.470 120 199 2.9E-57 T 14-10-2018 Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 Gene3D G3DSA:2.40.30.170 55 315 2.9E-57 T 14-10-2018 Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 Gene3D G3DSA:2.40.50.100 67 237 2.9E-57 T 14-10-2018 Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 Gene3D G3DSA:2.40.420.20 44 373 2.9E-57 T 14-10-2018 Atu2392 5290838a6b5ddb8db61eed0b2746e55b 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 387 1.0E-36 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 PIRSF PIRSF002401 1 353 1.2E-124 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type Atu2781 f178643a74e9b07a440f5595f5d2faae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 9.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 9.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.9E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 Hamap MF_01454 GTPase Obg [obg]. 2 327 44.401 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 324 1.3E-131 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 SUPERFAMILY SSF82051 2 158 4.71E-54 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Atu2781 f178643a74e9b07a440f5595f5d2faae 355 Pfam PF01018 GTP1/OBG 5 158 1.2E-56 T 14-10-2018 IPR006169 GTP1/OBG domain Atu2781 f178643a74e9b07a440f5595f5d2faae 355 Pfam PF01926 50S ribosome-binding GTPase 162 278 6.0E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Atu2781 f178643a74e9b07a440f5595f5d2faae 355 Gene3D G3DSA:2.70.210.12 1 158 2.7E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Atu2781 f178643a74e9b07a440f5595f5d2faae 355 SUPERFAMILY SSF52540 152 325 6.44E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2781 f178643a74e9b07a440f5595f5d2faae 355 Gene3D G3DSA:3.40.50.300 160 353 9.9E-46 T 14-10-2018 Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 SMART SM00490 504 600 3.1E-5 T 14-10-2018 IPR001650 Helicase, C-terminal Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 TIGRFAM TIGR00595 priA: primosomal protein N' 230 734 2.5E-181 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 Hamap MF_00983 Probable primosomal protein N' [priA]. 24 737 23.035 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 SMART SM00487 202 401 1.4E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 Gene3D G3DSA:1.10.8.630 21 125 1.5E-21 T 14-10-2018 Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 Gene3D G3DSA:3.40.50.300 199 388 1.8E-64 T 14-10-2018 Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 Pfam PF04851 Type III restriction enzyme, res subunit 207 369 1.3E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 SUPERFAMILY SSF52540 471 618 7.75E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2627 00ca892ad89530678e8ed5cc95fc1085 738 SUPERFAMILY SSF52540 205 384 1.38E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2650 43e8324088004db01b09d5f9099bf7f2 327 Gene3D G3DSA:3.40.50.720 1 187 7.3E-49 T 14-10-2018 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 SUPERFAMILY SSF48179 179 327 7.14E-45 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 SUPERFAMILY SSF51735 2 180 6.04E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2650 43e8324088004db01b09d5f9099bf7f2 327 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 318 33.049 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 159 1.7E-35 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 316 7.5E-41 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PIRSF PIRSF000114 1 327 6.5E-88 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 3.4E-36 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 3.4E-36 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 3.4E-36 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 3.4E-36 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 3.4E-36 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 3.4E-36 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Atu2650 43e8324088004db01b09d5f9099bf7f2 327 Gene3D G3DSA:1.10.1040.10 189 327 8.3E-42 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu1595 655d34217ef729d472797e5a6355f30b 342 SUPERFAMILY SSF51735 143 315 3.2E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1595 655d34217ef729d472797e5a6355f30b 342 SUPERFAMILY SSF50129 1 170 9.28E-43 T 14-10-2018 IPR011032 GroES-like superfamily Atu1595 655d34217ef729d472797e5a6355f30b 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 133 4.6E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1595 655d34217ef729d472797e5a6355f30b 342 Gene3D G3DSA:3.90.180.10 1 342 8.7E-103 T 14-10-2018 Atu1595 655d34217ef729d472797e5a6355f30b 342 Pfam PF00107 Zinc-binding dehydrogenase 177 304 1.5E-40 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu1595 655d34217ef729d472797e5a6355f30b 342 SMART SM00829 5 339 1.0E-30 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu3632 86b8f0ddbbda9f8bc5b5afce8996387a 78 Pfam PF01206 Sulfurtransferase TusA 7 76 1.2E-20 T 14-10-2018 IPR001455 TusA-like domain Atu3632 86b8f0ddbbda9f8bc5b5afce8996387a 78 Gene3D G3DSA:3.30.110.40 1 78 4.8E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily Atu3632 86b8f0ddbbda9f8bc5b5afce8996387a 78 SUPERFAMILY SSF64307 4 77 7.06E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 Gene3D G3DSA:2.40.110.10 140 239 1.2E-23 T 14-10-2018 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 258 390 4.0E-32 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 Gene3D G3DSA:1.10.540.10 32 139 1.7E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 137 7.5E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 Gene3D G3DSA:1.20.140.10 240 413 2.8E-55 T 14-10-2018 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 SUPERFAMILY SSF47203 252 414 1.48E-25 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 PIRSF PIRSF016578 16 408 2.7E-31 T 14-10-2018 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 SUPERFAMILY SSF56645 36 241 1.7E-46 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu5520 7ef7952aa4ed59e6f6288210ee65e910 415 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 25 414 2.3E-182 T 14-10-2018 IPR023922 Sulphate-starvation-induced SfnB Atu2764 a2a8a4c8eb760d521d2680b3d5757a1b 136 SUPERFAMILY SSF141523 88 135 1.11E-5 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2764 a2a8a4c8eb760d521d2680b3d5757a1b 136 Pfam PF03734 L,D-transpeptidase catalytic domain 49 135 3.2E-5 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu3300 b44b7ccf9c7df2b75cd994c6068fc95a 450 Gene3D G3DSA:3.90.1150.10 12 443 4.1E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3300 b44b7ccf9c7df2b75cd994c6068fc95a 450 SUPERFAMILY SSF53383 12 442 2.45E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3300 b44b7ccf9c7df2b75cd994c6068fc95a 450 Gene3D G3DSA:3.40.640.10 66 345 4.1E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3300 b44b7ccf9c7df2b75cd994c6068fc95a 450 PIRSF PIRSF000521 28 445 1.1E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3300 b44b7ccf9c7df2b75cd994c6068fc95a 450 Pfam PF00202 Aminotransferase class-III 32 439 1.0E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3300 b44b7ccf9c7df2b75cd994c6068fc95a 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3208 467f3cf55a67f0a81680afc92356083b 348 SUPERFAMILY SSF89733 3 343 4.58E-98 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 Atu3208 467f3cf55a67f0a81680afc92356083b 348 Gene3D G3DSA:1.10.1530.10 6 277 4.2E-101 T 14-10-2018 Atu3208 467f3cf55a67f0a81680afc92356083b 348 Pfam PF02615 Malate/L-lactate dehydrogenase 4 330 1.3E-96 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 Atu3208 467f3cf55a67f0a81680afc92356083b 348 Gene3D G3DSA:3.30.60.50 182 218 4.2E-101 T 14-10-2018 Atu3208 467f3cf55a67f0a81680afc92356083b 348 Gene3D G3DSA:3.30.1370.60 64 275 4.2E-101 T 14-10-2018 Atu3208 467f3cf55a67f0a81680afc92356083b 348 Gene3D G3DSA:1.10.1530.10 310 348 1.2E-10 T 14-10-2018 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 SUPERFAMILY SSF116878 123 442 1.44E-43 T 14-10-2018 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Gene3D G3DSA:1.20.120.430 124 442 8.7E-95 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 442 29.362 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 314 7.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 SUPERFAMILY SSF52540 211 366 4.03E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Gene3D G3DSA:3.30.1360.120 1 123 1.1E-36 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Pfam PF12631 MnmE helical domain 125 439 2.9E-48 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 122 2.3E-33 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 19 442 2.0E-79 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Gene3D G3DSA:3.40.50.300 220 372 8.7E-95 T 14-10-2018 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 SUPERFAMILY SSF103025 6 122 8.63E-35 T 14-10-2018 Atu2832 36b99a4d0902bfe4e396ffdc5b5d3667 442 Pfam PF01926 50S ribosome-binding GTPase 221 315 1.3E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Atu0299 e77fdc83a9ac6468c3b185ee4bb73e21 198 Gene3D G3DSA:3.40.50.1240 1 192 6.3E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu0299 e77fdc83a9ac6468c3b185ee4bb73e21 198 SUPERFAMILY SSF53254 19 174 2.08E-21 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu0299 e77fdc83a9ac6468c3b185ee4bb73e21 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 23 163 2.9E-15 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 Pfam PF00333 Ribosomal protein S5, N-terminal domain 23 86 4.2E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 Pfam PF03719 Ribosomal protein S5, C-terminal domain 99 169 2.1E-29 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 20 172 2.4E-66 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 Gene3D G3DSA:3.30.160.20 13 83 5.0E-30 T 14-10-2018 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 SUPERFAMILY SSF54768 19 87 3.56E-23 T 14-10-2018 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 SUPERFAMILY SSF54211 91 170 9.86E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu1929 3afc399893120de294ce3c3a3b162f0f 189 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 175 35.612 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Atu1929 3afc399893120de294ce3c3a3b162f0f 189 ProSitePatterns PS00585 Ribosomal protein S5 signature. 39 71 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Atu1929 3afc399893120de294ce3c3a3b162f0f 189 Gene3D G3DSA:3.30.230.10 87 179 1.2E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Atu1763 1db59ffa5e42140199a3c8b998e459ed 258 SUPERFAMILY SSF53328 56 234 6.67E-27 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu1763 1db59ffa5e42140199a3c8b998e459ed 258 Gene3D G3DSA:3.40.50.12230 56 241 3.5E-24 T 14-10-2018 Atu1763 1db59ffa5e42140199a3c8b998e459ed 258 Pfam PF00551 Formyl transferase 101 203 1.9E-12 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu3406 8ba1e086b0cba20c1015f09a2d0d5301 278 Pfam PF00583 Acetyltransferase (GNAT) family 42 117 8.9E-14 T 14-10-2018 IPR000182 GNAT domain Atu3406 8ba1e086b0cba20c1015f09a2d0d5301 278 SUPERFAMILY SSF55729 7 256 4.12E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3406 8ba1e086b0cba20c1015f09a2d0d5301 278 Gene3D G3DSA:3.40.630.30 1 133 9.3E-22 T 14-10-2018 Atu3406 8ba1e086b0cba20c1015f09a2d0d5301 278 Gene3D G3DSA:3.40.630.90 134 233 3.1E-7 T 14-10-2018 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 Gene3D G3DSA:3.20.20.70 14 221 1.0E-28 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 SUPERFAMILY SSF102114 38 228 1.44E-7 T 14-10-2018 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 Pfam PF13394 4Fe-4S single cluster domain 37 125 1.7E-6 T 14-10-2018 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 PIRSF PIRSF000370 13 251 4.7E-60 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 Pfam PF04055 Radical SAM superfamily 39 132 1.9E-8 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 14 251 1.3E-117 T 14-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Atu3344 c638da45d2a60e57c0da77a778e5242f 251 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 15 248 40.903 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Atu2773 97b9238a1e1cab37740597a0111295ef 399 SUPERFAMILY SSF88713 176 393 1.96E-56 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu2773 97b9238a1e1cab37740597a0111295ef 399 Pfam PF04748 Divergent polysaccharide deacetylase 179 393 6.4E-57 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase Atu2773 97b9238a1e1cab37740597a0111295ef 399 Gene3D G3DSA:3.20.20.370 160 399 3.3E-85 T 14-10-2018 Atu6022 3ab368fcfa763948a0f4b65ab867e89d 678 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 181 3.8E-52 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu6022 3ab368fcfa763948a0f4b65ab867e89d 678 SUPERFAMILY SSF53067 1 404 2.24E-5 T 14-10-2018 Atu6022 3ab368fcfa763948a0f4b65ab867e89d 678 Pfam PF01968 Hydantoinase/oxoprolinase 204 487 2.5E-86 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu2154 99cee67b89ccfd47e381011e6025a700 443 SUPERFAMILY SSF103473 8 423 4.19E-58 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2154 99cee67b89ccfd47e381011e6025a700 443 Pfam PF07690 Major Facilitator Superfamily 51 384 2.7E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2154 99cee67b89ccfd47e381011e6025a700 443 Gene3D G3DSA:1.20.1250.20 17 432 2.4E-54 T 14-10-2018 Atu0933 9b4ae4ca34dbd10d9904a8753930b7be 274 SUPERFAMILY SSF56601 34 251 2.05E-32 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu0933 9b4ae4ca34dbd10d9904a8753930b7be 274 Pfam PF00905 Penicillin binding protein transpeptidase domain 48 249 6.5E-39 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu0933 9b4ae4ca34dbd10d9904a8753930b7be 274 ProSitePatterns PS00337 Beta-lactamase class-D active site. 58 68 - T 14-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 Atu0933 9b4ae4ca34dbd10d9904a8753930b7be 274 Gene3D G3DSA:3.40.710.10 31 273 5.0E-86 T 14-10-2018 Atu1605 f552faf0b3e9145214127dbf41f9bf59 239 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 233 55.88 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein Atu1605 f552faf0b3e9145214127dbf41f9bf59 239 Gene3D G3DSA:3.40.1350.60 80 232 1.6E-51 T 14-10-2018 Atu1605 f552faf0b3e9145214127dbf41f9bf59 239 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 225 1.9E-65 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein Atu1605 f552faf0b3e9145214127dbf41f9bf59 239 Pfam PF03749 Sugar fermentation stimulation protein 13 224 8.5E-72 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein Atu1605 f552faf0b3e9145214127dbf41f9bf59 239 Gene3D G3DSA:2.40.50.580 1 79 5.6E-25 T 14-10-2018 Atu1505 391c8e9d28b70a882705da41629e5f50 499 Pfam PF05036 Sporulation related domain 418 496 1.8E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 Atu1505 391c8e9d28b70a882705da41629e5f50 499 SUPERFAMILY SSF56601 27 283 1.96E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu1505 391c8e9d28b70a882705da41629e5f50 499 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 54 269 1.2E-55 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Atu1505 391c8e9d28b70a882705da41629e5f50 499 Gene3D G3DSA:3.40.710.10 29 305 2.1E-77 T 14-10-2018 Atu1505 391c8e9d28b70a882705da41629e5f50 499 SUPERFAMILY SSF110997 417 495 2.22E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atu1505 391c8e9d28b70a882705da41629e5f50 499 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 157 170 1.1E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu1505 391c8e9d28b70a882705da41629e5f50 499 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 77 88 1.1E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu1505 391c8e9d28b70a882705da41629e5f50 499 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 1.1E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Atu3523 f902f14ed246a0509cbbb89e95ea5f73 471 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 372 455 4.4E-11 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Atu3523 f902f14ed246a0509cbbb89e95ea5f73 471 Pfam PF01943 Polysaccharide biosynthesis protein 44 319 7.1E-21 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 Pfam PF00366 Ribosomal protein S17 8 74 1.4E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 8.3E-36 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 78 23.53 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 2.0E-37 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 5.0E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 5.0E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 5.0E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 Gene3D G3DSA:2.40.50.140 1 78 1.8E-34 T 14-10-2018 Atu1937 d0d098e3f73f6171bd81e1ba5701b754 78 SUPERFAMILY SSF50249 3 75 4.28E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu3397 16eb0c3a8191fd70dc0c4f23c1ec86a9 291 Pfam PF00583 Acetyltransferase (GNAT) family 39 123 2.1E-6 T 14-10-2018 IPR000182 GNAT domain Atu3397 16eb0c3a8191fd70dc0c4f23c1ec86a9 291 Gene3D G3DSA:3.40.630.30 9 132 1.4E-10 T 14-10-2018 Atu3397 16eb0c3a8191fd70dc0c4f23c1ec86a9 291 SUPERFAMILY SSF55729 25 207 3.2E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1269 f7838dc73137ca4579546ff12f0b601f 201 SUPERFAMILY SSF56770 51 196 2.35E-61 T 14-10-2018 Atu1269 f7838dc73137ca4579546ff12f0b601f 201 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 53 195 7.0E-70 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1269 f7838dc73137ca4579546ff12f0b601f 201 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 86 187 1.9E-22 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1269 f7838dc73137ca4579546ff12f0b601f 201 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 161 177 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1269 f7838dc73137ca4579546ff12f0b601f 201 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 42 194 39.622 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1269 f7838dc73137ca4579546ff12f0b601f 201 Gene3D G3DSA:3.40.50.12280 37 201 4.2E-74 T 14-10-2018 Atu2243 0bd0f8bd8e58a7312a4673d068ff4a06 291 Gene3D G3DSA:3.60.21.10 1 282 2.2E-61 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu2243 0bd0f8bd8e58a7312a4673d068ff4a06 291 Pfam PF00149 Calcineurin-like phosphoesterase 6 205 6.7E-18 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu2243 0bd0f8bd8e58a7312a4673d068ff4a06 291 SUPERFAMILY SSF56300 7 262 1.38E-45 T 14-10-2018 Atu5456 d9a0f1edca43ef8aa39a3cecbc355a5d 303 Gene3D G3DSA:3.30.420.310 82 284 1.4E-77 T 14-10-2018 Atu5456 d9a0f1edca43ef8aa39a3cecbc355a5d 303 Gene3D G3DSA:3.30.420.300 8 111 1.4E-77 T 14-10-2018 Atu5456 d9a0f1edca43ef8aa39a3cecbc355a5d 303 Pfam PF05035 2-keto-3-deoxy-galactonokinase 11 293 9.3E-81 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 Atu2348 3bed6677bdc3b596eb8c965e3ab28001 354 SUPERFAMILY SSF53822 27 342 5.5E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu2348 3bed6677bdc3b596eb8c965e3ab28001 354 Gene3D G3DSA:3.40.50.2300 30 328 1.8E-140 T 14-10-2018 Atu2348 3bed6677bdc3b596eb8c965e3ab28001 354 Gene3D G3DSA:3.40.50.2300 132 348 1.8E-140 T 14-10-2018 Atu2348 3bed6677bdc3b596eb8c965e3ab28001 354 Pfam PF13407 Periplasmic binding protein domain 30 307 3.1E-64 T 14-10-2018 IPR025997 Periplasmic binding protein Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 19 128 4.7E-46 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 Gene3D G3DSA:1.20.120.910 5 139 1.8E-39 T 14-10-2018 Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 96 131 3.0E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 SUPERFAMILY SSF109635 7 97 2.35E-33 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 SUPERFAMILY SSF57716 98 137 2.57E-9 T 14-10-2018 Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 15 137 28.996 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Atu1359 c2c7a91ba9b0e916977a931f20df2962 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 101 125 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Atu0612 8fe858a2fae52b0c2fd738dfec8fbe04 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 247 6.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0612 8fe858a2fae52b0c2fd738dfec8fbe04 270 SUPERFAMILY SSF161098 8 254 4.67E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu0612 8fe858a2fae52b0c2fd738dfec8fbe04 270 Gene3D G3DSA:1.10.3720.10 10 258 4.5E-48 T 14-10-2018 IPR035906 MetI-like superfamily Atu4541 db35d8db614384f72fc3bf57c28deb0a 144 Gene3D G3DSA:1.20.1290.10 8 129 6.2E-35 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu4541 db35d8db614384f72fc3bf57c28deb0a 144 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 7 128 1.6E-61 T 14-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 Atu4541 db35d8db614384f72fc3bf57c28deb0a 144 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 122 2.3E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu4541 db35d8db614384f72fc3bf57c28deb0a 144 SUPERFAMILY SSF69118 9 122 2.09E-32 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0202 adf9cc2650ee4ff6594bf68809ab477a 354 Pfam PF13343 Bacterial extracellular solute-binding protein 81 312 1.8E-21 T 14-10-2018 Atu0202 adf9cc2650ee4ff6594bf68809ab477a 354 Gene3D G3DSA:3.40.190.10 36 310 1.8E-118 T 14-10-2018 Atu0202 adf9cc2650ee4ff6594bf68809ab477a 354 Gene3D G3DSA:3.40.190.10 132 340 1.8E-118 T 14-10-2018 Atu0202 adf9cc2650ee4ff6594bf68809ab477a 354 SUPERFAMILY SSF53850 35 345 1.89E-77 T 14-10-2018 Atu0202 adf9cc2650ee4ff6594bf68809ab477a 354 PIRSF PIRSF002825 3 350 7.2E-89 T 14-10-2018 IPR026045 Ferric binding protein Atu0240 560a692a6edc0f251cd9d9506c1397e9 135 SUPERFAMILY SSF102462 1 134 2.62E-45 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Atu0240 560a692a6edc0f251cd9d9506c1397e9 135 Gene3D G3DSA:3.40.1490.10 1 135 1.2E-58 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Atu0240 560a692a6edc0f251cd9d9506c1397e9 135 Pfam PF09391 Protein of unknown function (DUF2000) 4 134 6.0E-42 T 14-10-2018 IPR018988 Protein of unknown function DUF2000 Atu0622 647134138f2d9f1cca08a68e619e1193 327 Pfam PF00753 Metallo-beta-lactamase superfamily 103 255 3.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu0622 647134138f2d9f1cca08a68e619e1193 327 SMART SM00849 99 300 4.1E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu0622 647134138f2d9f1cca08a68e619e1193 327 SUPERFAMILY SSF56281 39 321 9.01E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu0622 647134138f2d9f1cca08a68e619e1193 327 Gene3D G3DSA:3.60.15.10 36 326 5.9E-84 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu4298 423287ee87cbba4f5b3a17f994213674 672 SUPERFAMILY SSF82689 540 641 9.15E-13 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atu4298 423287ee87cbba4f5b3a17f994213674 672 SUPERFAMILY SSF82861 417 475 3.4E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atu4298 423287ee87cbba4f5b3a17f994213674 672 Gene3D G3DSA:3.30.70.100 545 633 8.7E-16 T 14-10-2018 Atu4298 423287ee87cbba4f5b3a17f994213674 672 Gene3D G3DSA:2.30.30.60 492 541 3.7E-12 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atu4298 423287ee87cbba4f5b3a17f994213674 672 SUPERFAMILY SSF50182 477 539 7.85E-11 T 14-10-2018 IPR010920 LSM domain superfamily Atu4298 423287ee87cbba4f5b3a17f994213674 672 Pfam PF00924 Mechanosensitive ion channel 434 635 3.3E-40 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atu5293 c39b642094fbbdba8c5436262c40a65d 139 PIRSF PIRSF004638 1 139 2.6E-32 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 Atu5293 c39b642094fbbdba8c5436262c40a65d 139 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 139 3.5E-17 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 Atu3187 bc256d5cbd765df26bbdb58d6961a29f 282 SUPERFAMILY SSF161098 4 278 2.15E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu3187 bc256d5cbd765df26bbdb58d6961a29f 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 277 1.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3187 bc256d5cbd765df26bbdb58d6961a29f 282 Gene3D G3DSA:1.10.3720.10 2 275 6.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu0319 bcb7b94b70cc7445c8f71ede235dd004 524 Gene3D G3DSA:3.30.200.20 237 250 4.0E-5 T 14-10-2018 Atu0319 bcb7b94b70cc7445c8f71ede235dd004 524 Pfam PF03109 ABC1 family 114 233 1.4E-28 T 14-10-2018 IPR004147 UbiB domain Atu0319 bcb7b94b70cc7445c8f71ede235dd004 524 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 444 9.4E-175 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Atu0319 bcb7b94b70cc7445c8f71ede235dd004 524 SUPERFAMILY SSF56112 96 434 2.53E-39 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu0319 bcb7b94b70cc7445c8f71ede235dd004 524 Gene3D G3DSA:1.10.510.10 251 337 4.0E-5 T 14-10-2018 Atu1876 78df52aecba8d4fff0362cebd291beba 307 SUPERFAMILY SSF110581 11 306 1.96E-117 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Atu1876 78df52aecba8d4fff0362cebd291beba 307 Pfam PF04227 Indigoidine synthase A like protein 16 305 8.4E-129 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Atu1876 78df52aecba8d4fff0362cebd291beba 307 Gene3D G3DSA:3.40.1790.10 10 307 1.0E-130 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Atu1876 78df52aecba8d4fff0362cebd291beba 307 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 307 42.393 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Atu5099 8b98aea1f5ec20f7b908bd360ae5ecba 472 Gene3D G3DSA:2.30.40.20 8 43 5.2E-11 T 14-10-2018 Atu5099 8b98aea1f5ec20f7b908bd360ae5ecba 472 Gene3D G3DSA:1.10.150.20 144 194 5.2E-11 T 14-10-2018 Atu5099 8b98aea1f5ec20f7b908bd360ae5ecba 472 Gene3D G3DSA:3.30.70.270 44 143 5.2E-11 T 14-10-2018 Atu5099 8b98aea1f5ec20f7b908bd360ae5ecba 472 Pfam PF00817 impB/mucB/samB family 7 115 3.1E-6 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Atu5099 8b98aea1f5ec20f7b908bd360ae5ecba 472 SUPERFAMILY SSF56672 4 194 5.34E-33 T 14-10-2018 Atu1417 72f6f0c3b651729b1d7b3f29510744f5 265 SUPERFAMILY SSF52096 5 260 1.6E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu1417 72f6f0c3b651729b1d7b3f29510744f5 265 Gene3D G3DSA:1.10.12.10 204 262 6.5E-23 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Atu1417 72f6f0c3b651729b1d7b3f29510744f5 265 Gene3D G3DSA:3.90.226.10 1 203 1.8E-60 T 14-10-2018 Atu1417 72f6f0c3b651729b1d7b3f29510744f5 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 256 8.7E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Atu1417 72f6f0c3b651729b1d7b3f29510744f5 265 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 57 66 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Atu0820 b52d82d4ec1e5398439576166597155d 341 SUPERFAMILY SSF53850 28 337 5.1E-86 T 14-10-2018 Atu0820 b52d82d4ec1e5398439576166597155d 341 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 26 336 3.7E-137 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 Atu0820 b52d82d4ec1e5398439576166597155d 341 Gene3D G3DSA:3.40.190.10 34 304 1.0E-127 T 14-10-2018 Atu0820 b52d82d4ec1e5398439576166597155d 341 Gene3D G3DSA:3.40.190.10 122 335 1.0E-127 T 14-10-2018 Atu0820 b52d82d4ec1e5398439576166597155d 341 Pfam PF13531 Bacterial extracellular solute-binding protein 40 288 1.6E-43 T 14-10-2018 Atu0820 b52d82d4ec1e5398439576166597155d 341 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 153 161 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 Atu3222 6939c53ced3e41a524be3cd9536340c1 319 Gene3D G3DSA:3.40.50.2300 28 287 9.9E-106 T 14-10-2018 Atu3222 6939c53ced3e41a524be3cd9536340c1 319 Pfam PF13407 Periplasmic binding protein domain 32 287 2.9E-45 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3222 6939c53ced3e41a524be3cd9536340c1 319 SUPERFAMILY SSF53822 23 304 3.03E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3222 6939c53ced3e41a524be3cd9536340c1 319 Gene3D G3DSA:3.40.50.2300 128 269 9.9E-106 T 14-10-2018 Atu5206 41171b40d9cfad5f2882d1699c260366 299 SUPERFAMILY SSF53850 94 297 1.81E-43 T 14-10-2018 Atu5206 41171b40d9cfad5f2882d1699c260366 299 SUPERFAMILY SSF46785 11 117 6.69E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5206 41171b40d9cfad5f2882d1699c260366 299 Pfam PF03466 LysR substrate binding domain 94 294 2.1E-40 T 14-10-2018 IPR005119 LysR, substrate-binding Atu5206 41171b40d9cfad5f2882d1699c260366 299 Gene3D G3DSA:3.40.190.290 97 295 1.1E-63 T 14-10-2018 Atu5206 41171b40d9cfad5f2882d1699c260366 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.5E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu5206 41171b40d9cfad5f2882d1699c260366 299 Gene3D G3DSA:1.10.10.10 7 96 3.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0839 d4bc8f26bdbfecd9d05ce8a187fb2a24 331 SUPERFAMILY SSF56281 4 311 3.11E-62 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu0839 d4bc8f26bdbfecd9d05ce8a187fb2a24 331 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 1 329 7.5E-147 T 14-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated Atu0839 d4bc8f26bdbfecd9d05ce8a187fb2a24 331 Gene3D G3DSA:3.60.15.10 8 172 1.8E-17 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu6104 37b26b7dcc7f5a1968bac48b372ed460 157 PIRSF PIRSF036055 1 156 2.3E-90 T 14-10-2018 IPR017042 Uncharacterised conserved protein UCP036055 Atu0797 aacd1713d2a56f640b0bb441012c9a91 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 73 184 6.5E-9 T 14-10-2018 Atu0797 aacd1713d2a56f640b0bb441012c9a91 203 Gene3D G3DSA:1.10.150.240 20 84 5.9E-31 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Atu0797 aacd1713d2a56f640b0bb441012c9a91 203 Gene3D G3DSA:3.40.50.1000 8 184 5.9E-31 T 14-10-2018 IPR023214 HAD superfamily Atu0797 aacd1713d2a56f640b0bb441012c9a91 203 SUPERFAMILY SSF56784 6 196 6.12E-34 T 14-10-2018 IPR036412 HAD-like superfamily Atu0797 aacd1713d2a56f640b0bb441012c9a91 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 185 3.3E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu0972 8b1e34ce64b990fdbb43e2220253f618 142 PIRSF PIRSF002721 1 142 1.1E-50 T 14-10-2018 IPR016364 Surface antigen, Rickettsia type Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 SUPERFAMILY SSF51419 17 262 5.23E-67 T 14-10-2018 IPR029066 PLP-binding barrel Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 202 218 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01182 Ornithine decarboxylase signature 87 111 7.0E-23 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01182 Ornithine decarboxylase signature 117 139 7.0E-23 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01182 Ornithine decarboxylase signature 17 41 7.0E-23 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01182 Ornithine decarboxylase signature 319 329 7.0E-23 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01182 Ornithine decarboxylase signature 43 70 7.0E-23 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 Gene3D G3DSA:2.40.37.10 17 370 5.4E-97 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 26 259 1.6E-56 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 45 63 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 SUPERFAMILY SSF50621 228 377 9.42E-33 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 260 355 4.2E-12 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 45 63 4.5E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 250 269 4.5E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 167 180 4.5E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 65 77 4.5E-20 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Atu3196 8b23b383af76efe2cf82c6f0f23f2b13 377 Gene3D G3DSA:3.20.20.10 24 262 5.4E-97 T 14-10-2018 IPR029066 PLP-binding barrel Atu6182 c3c08064534ae99a140aa09bfcbd23a6 447 PIRSF PIRSF016095 1 445 2.0E-268 T 14-10-2018 IPR016644 T-DNA border endonuclease virD2 GO:0004520|GO:0009405|GO:0051819 Atu6182 c3c08064534ae99a140aa09bfcbd23a6 447 Pfam PF03432 Relaxase/Mobilisation nuclease domain 16 213 1.5E-33 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 Gene3D G3DSA:3.40.1010.10 1 110 3.1E-27 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 Gene3D G3DSA:3.30.950.10 111 230 1.0E-40 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 2.6E-92 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.1E-40 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu2796 a6a8d8c9b935868aed90fe90d0404f59 257 SUPERFAMILY SSF53790 2 248 1.1E-59 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu3780 8905780792e4591fd474d3587054f75f 411 Gene3D G3DSA:3.40.50.1110 85 309 2.3E-19 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Atu3780 8905780792e4591fd474d3587054f75f 411 Pfam PF04311 Protein of unknown function (DUF459) 62 354 2.3E-54 T 14-10-2018 IPR007407 Protein of unknown function DUF459 Atu3780 8905780792e4591fd474d3587054f75f 411 SUPERFAMILY SSF52266 91 309 9.16E-18 T 14-10-2018 Atu2162 f85c5975dc7e25c6cf20ea078a2d2966 247 Gene3D G3DSA:3.30.70.2970 50 162 1.7E-68 T 14-10-2018 Atu2162 f85c5975dc7e25c6cf20ea078a2d2966 247 Gene3D G3DSA:3.30.110.170 40 243 1.7E-68 T 14-10-2018 Atu2162 f85c5975dc7e25c6cf20ea078a2d2966 247 Pfam PF04402 Protein of unknown function (DUF541) 38 243 6.3E-50 T 14-10-2018 IPR007497 Protein of unknown function DUF541 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 SUPERFAMILY SSF52540 282 530 2.55E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 SMART SM00382 40 240 5.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 SMART SM00382 317 516 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 SUPERFAMILY SSF52540 11 261 6.2E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 510 537 6.4E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 286 6.8E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 Pfam PF00005 ABC transporter 31 189 4.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 Pfam PF00005 ABC transporter 308 458 2.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 Gene3D G3DSA:3.40.50.300 281 547 4.1E-84 T 14-10-2018 Atu3053 5c2e01ac59e9207c5c84d51ba6c03d4a 548 Gene3D G3DSA:3.40.50.300 9 280 1.4E-86 T 14-10-2018 Atu4250 7953afda7f3636249bc748db15bc2349 280 SUPERFAMILY SSF161098 8 280 1.96E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu4250 7953afda7f3636249bc748db15bc2349 280 Gene3D G3DSA:1.10.3720.10 3 271 1.0E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu4250 7953afda7f3636249bc748db15bc2349 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 268 9.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5246 4cff095c9f0889a45a7ecd4f0b21018e 268 Gene3D G3DSA:1.10.3720.10 7 266 3.7E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu5246 4cff095c9f0889a45a7ecd4f0b21018e 268 SUPERFAMILY SSF161098 5 253 3.01E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu5246 4cff095c9f0889a45a7ecd4f0b21018e 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 252 3.6E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0234 1dea4b21a57ef59639d978f4e1e7a89f 291 SUPERFAMILY SSF103481 186 285 1.11E-9 T 14-10-2018 Atu0234 1dea4b21a57ef59639d978f4e1e7a89f 291 SUPERFAMILY SSF103481 49 137 7.19E-8 T 14-10-2018 Atu0234 1dea4b21a57ef59639d978f4e1e7a89f 291 Pfam PF00892 EamA-like transporter family 6 130 1.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0234 1dea4b21a57ef59639d978f4e1e7a89f 291 Pfam PF00892 EamA-like transporter family 152 283 6.8E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4540 c4de9d432c009382dba515d6277e764e 246 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 44 6.0E-13 T 14-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 Atu4540 c4de9d432c009382dba515d6277e764e 246 Pfam PF00775 Dioxygenase 49 233 5.0E-54 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Atu4540 c4de9d432c009382dba515d6277e764e 246 SUPERFAMILY SSF49482 13 243 6.41E-80 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Atu4540 c4de9d432c009382dba515d6277e764e 246 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 84 112 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Atu4540 c4de9d432c009382dba515d6277e764e 246 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 19 241 3.8E-107 T 14-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 Atu4540 c4de9d432c009382dba515d6277e764e 246 Gene3D G3DSA:2.60.130.10 6 242 8.4E-89 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Atu3069 18a6d88f07e1d078f7d9e1345193632d 280 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 42 222 2.0E-90 T 14-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family Atu3069 18a6d88f07e1d078f7d9e1345193632d 280 PIRSF PIRSF005956 10 279 3.1E-94 T 14-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family Atu3069 18a6d88f07e1d078f7d9e1345193632d 280 SUPERFAMILY SSF51366 9 278 6.75E-30 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu3069 18a6d88f07e1d078f7d9e1345193632d 280 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 20 274 5.7E-66 T 14-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family Atu3069 18a6d88f07e1d078f7d9e1345193632d 280 Pfam PF03437 BtpA family 19 274 2.4E-69 T 14-10-2018 IPR005137 Membrane complex biogenesis protein, BtpA family Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 74 4.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 Gene3D G3DSA:1.20.120.530 80 231 2.0E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 Pfam PF07729 FCD domain 99 223 1.8E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 SMART SM00345 15 74 2.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 SMART SM00895 99 224 7.7E-20 T 14-10-2018 IPR011711 GntR, C-terminal Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 Gene3D G3DSA:1.10.10.10 12 78 1.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 SUPERFAMILY SSF48008 97 231 4.45E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu0271 abf3f67431766f8d2f5ba40c052c58f4 235 SUPERFAMILY SSF46785 11 78 4.01E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4003 a85e59a2b5d15cc5ed8e2436c8c590c2 133 Pfam PF01361 Tautomerase enzyme 12 61 1.5E-4 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 Atu4003 a85e59a2b5d15cc5ed8e2436c8c590c2 133 Gene3D G3DSA:3.30.429.10 68 130 1.1E-9 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Atu4003 a85e59a2b5d15cc5ed8e2436c8c590c2 133 Gene3D G3DSA:3.30.429.10 2 64 1.1E-8 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Atu4003 a85e59a2b5d15cc5ed8e2436c8c590c2 133 SUPERFAMILY SSF55331 3 126 4.19E-17 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Atu1390 14a863adbb9fc1b18c12b90078b893f6 219 SUPERFAMILY SSF161098 13 198 9.03E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu1390 14a863adbb9fc1b18c12b90078b893f6 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 196 1.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1390 14a863adbb9fc1b18c12b90078b893f6 219 Gene3D G3DSA:1.10.3720.10 5 215 2.7E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu1390 14a863adbb9fc1b18c12b90078b893f6 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 1.7E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1429 f70ad155dba8e4c79a0dc76dc8cde9d5 306 Gene3D G3DSA:3.40.50.970 1 306 2.7E-130 T 14-10-2018 Atu1429 f70ad155dba8e4c79a0dc76dc8cde9d5 306 SUPERFAMILY SSF52518 1 305 1.26E-104 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu1429 f70ad155dba8e4c79a0dc76dc8cde9d5 306 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 1 305 4.0E-153 T 14-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 Atu1429 f70ad155dba8e4c79a0dc76dc8cde9d5 306 Pfam PF00676 Dehydrogenase E1 component 1 297 2.1E-108 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Atu3498 02dede7144c5096cf2852e24e1d536ff 478 Gene3D G3DSA:3.40.605.10 11 472 2.8E-161 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3498 02dede7144c5096cf2852e24e1d536ff 478 SUPERFAMILY SSF53720 4 474 2.62E-159 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu3498 02dede7144c5096cf2852e24e1d536ff 478 Gene3D G3DSA:3.40.309.10 255 444 2.8E-161 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu3498 02dede7144c5096cf2852e24e1d536ff 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu3498 02dede7144c5096cf2852e24e1d536ff 478 Pfam PF00171 Aldehyde dehydrogenase family 15 474 1.1E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu3998 8178244b666b77125ebd9e321be8f999 381 SUPERFAMILY SSF53383 20 373 3.54E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3998 8178244b666b77125ebd9e321be8f999 381 Pfam PF00155 Aminotransferase class I and II 29 365 1.2E-44 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu3998 8178244b666b77125ebd9e321be8f999 381 Gene3D G3DSA:3.90.1150.10 31 369 1.2E-111 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3998 8178244b666b77125ebd9e321be8f999 381 Gene3D G3DSA:3.40.640.10 46 279 1.2E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu5022 c9b5f7cb16bbf1713cd3f5d80b8a3149 632 Pfam PF07693 KAP family P-loop domain 14 393 5.5E-84 T 14-10-2018 IPR011646 KAP family P-loop domain Atu5022 c9b5f7cb16bbf1713cd3f5d80b8a3149 632 SUPERFAMILY SSF52540 13 413 9.25E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4461 076a201479ffe350b6131f4cc26eb89c 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 85 9.7E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu4461 076a201479ffe350b6131f4cc26eb89c 95 Gene3D G3DSA:3.30.2310.20 1 92 2.3E-26 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu4461 076a201479ffe350b6131f4cc26eb89c 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 91 1.4E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu1369 00e0f1af3138baa69c65a68b39cbbb9f 142 Gene3D G3DSA:3.30.428.10 3 140 1.9E-44 T 14-10-2018 IPR036265 HIT-like superfamily Atu1369 00e0f1af3138baa69c65a68b39cbbb9f 142 SUPERFAMILY SSF54197 4 140 1.7E-43 T 14-10-2018 IPR036265 HIT-like superfamily Atu1369 00e0f1af3138baa69c65a68b39cbbb9f 142 PRINTS PR00332 Histidine triad family signature 31 49 5.5E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Atu1369 00e0f1af3138baa69c65a68b39cbbb9f 142 PRINTS PR00332 Histidine triad family signature 10 26 5.5E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Atu1369 00e0f1af3138baa69c65a68b39cbbb9f 142 PRINTS PR00332 Histidine triad family signature 98 108 5.5E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Atu1369 00e0f1af3138baa69c65a68b39cbbb9f 142 Pfam PF01230 HIT domain 16 112 2.0E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 252 2.1E-58 T 14-10-2018 Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 SUPERFAMILY SSF51735 4 255 1.09E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 Gene3D G3DSA:3.40.50.720 1 256 3.0E-81 T 14-10-2018 Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.3E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3164 d1da118ebec573bd1ad8ffcaeb500a9c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4040 5238a5b5eed2237200d8efde755bcb91 208 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 200 30.214 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Atu4040 5238a5b5eed2237200d8efde755bcb91 208 SUPERFAMILY SSF53335 7 200 4.85E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4040 5238a5b5eed2237200d8efde755bcb91 208 Pfam PF04445 Putative SAM-dependent methyltransferase 4 198 1.5E-66 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Atu4040 5238a5b5eed2237200d8efde755bcb91 208 Gene3D G3DSA:3.40.50.150 10 205 5.1E-62 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 Gene3D G3DSA:1.10.246.130 281 393 1.2E-37 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 70 95 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 163 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 265 281 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 428 446 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 479 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 424 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 182 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 295 314 1.7E-69 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 Pfam PF01019 Gamma-glutamyltranspeptidase 63 580 7.0E-158 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 Gene3D G3DSA:3.60.20.40 406 584 2.5E-56 T 14-10-2018 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 577 5.1E-133 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Atu5507 eea3d4e317b0ba8c18b8e62481881893 585 SUPERFAMILY SSF56235 41 584 1.93E-170 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu3087 b821e90f1298a6a8c3dfbdeddfd40a67 303 SUPERFAMILY SSF161098 36 290 9.16E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu3087 b821e90f1298a6a8c3dfbdeddfd40a67 303 Gene3D G3DSA:1.10.3720.10 25 302 2.3E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu1739 3132bda4c76374359a3301071cc104a1 412 Pfam PF01594 AI-2E family transporter 36 366 8.6E-39 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Atu4695 616ad074fabc7285869d927e5f199754 521 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Atu4695 616ad074fabc7285869d927e5f199754 521 PIRSF PIRSF002741 9 517 6.8E-87 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4695 616ad074fabc7285869d927e5f199754 521 SUPERFAMILY SSF53850 23 517 3.62E-122 T 14-10-2018 Atu4695 616ad074fabc7285869d927e5f199754 521 Gene3D G3DSA:3.40.190.10 189 502 5.8E-116 T 14-10-2018 Atu4695 616ad074fabc7285869d927e5f199754 521 Gene3D G3DSA:3.10.105.10 264 494 5.8E-116 T 14-10-2018 Atu4695 616ad074fabc7285869d927e5f199754 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 429 2.3E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4695 616ad074fabc7285869d927e5f199754 521 Gene3D G3DSA:3.90.76.10 33 188 5.8E-116 T 14-10-2018 Atu3504 debd54332b27528564351b4117ba7b30 328 Pfam PF13531 Bacterial extracellular solute-binding protein 36 277 1.5E-36 T 14-10-2018 Atu3504 debd54332b27528564351b4117ba7b30 328 SUPERFAMILY SSF53850 24 325 1.14E-76 T 14-10-2018 Atu3504 debd54332b27528564351b4117ba7b30 328 Gene3D G3DSA:3.40.190.10 112 322 5.0E-111 T 14-10-2018 Atu3504 debd54332b27528564351b4117ba7b30 328 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 24 324 4.6E-117 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 Atu3504 debd54332b27528564351b4117ba7b30 328 Gene3D G3DSA:3.40.190.10 30 293 5.0E-111 T 14-10-2018 Atu3504 debd54332b27528564351b4117ba7b30 328 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 143 151 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 Atu4091 6ac5ee4ddbee574d84cc651a460f03b8 525 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 506 1.3E-179 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atu4091 6ac5ee4ddbee574d84cc651a460f03b8 525 PIRSF PIRSF006446 358 522 2.8E-40 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atu4091 6ac5ee4ddbee574d84cc651a460f03b8 525 PIRSF PIRSF006446 1 331 1.2E-113 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Atu3401 15efc29a9eedbbd6f0acd0c753fe2364 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu3401 15efc29a9eedbbd6f0acd0c753fe2364 487 SUPERFAMILY SSF53720 8 486 4.06E-152 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu3401 15efc29a9eedbbd6f0acd0c753fe2364 487 Pfam PF00171 Aldehyde dehydrogenase family 27 481 8.4E-149 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu3401 15efc29a9eedbbd6f0acd0c753fe2364 487 Gene3D G3DSA:3.40.309.10 263 452 1.7E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu3401 15efc29a9eedbbd6f0acd0c753fe2364 487 Gene3D G3DSA:3.40.605.10 18 474 1.7E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3401 15efc29a9eedbbd6f0acd0c753fe2364 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 259 2.2E-65 T 14-10-2018 Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 Gene3D G3DSA:3.40.50.720 1 261 6.4E-86 T 14-10-2018 Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 SUPERFAMILY SSF51735 19 262 1.65E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 9.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 9.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 9.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5276 cca7edd8fec388a1333c4b0dec11ee61 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 8.4E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4322 af5610d96e7558473b34c3bdfdaef3d6 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 317 1.3E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 19 264 5.4E-93 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 Hamap MF_01974 Methionine aminopeptidase [map]. 19 265 40.004 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 SUPERFAMILY SSF55920 21 267 1.96E-87 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 Gene3D G3DSA:3.90.230.10 2 267 1.6E-109 T 14-10-2018 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 Pfam PF00557 Metallopeptidase family M24 29 256 2.5E-51 T 14-10-2018 IPR000994 Peptidase M24 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 106 122 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 PRINTS PR00599 Methionine aminopeptidase-1 signature 84 97 1.1E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu1606 a6a21b0fb57a735fb1232642ef9d40aa 278 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 182 200 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Atu2279 30b2b12b42ebf7dc9ac556c153311929 348 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 5 289 3.5E-163 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 Atu2279 30b2b12b42ebf7dc9ac556c153311929 348 Pfam PF00005 ABC transporter 45 196 5.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2279 30b2b12b42ebf7dc9ac556c153311929 348 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2279 30b2b12b42ebf7dc9ac556c153311929 348 SUPERFAMILY SSF52540 44 275 4.37E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2279 30b2b12b42ebf7dc9ac556c153311929 348 Gene3D G3DSA:3.40.50.300 33 297 1.6E-65 T 14-10-2018 Atu2279 30b2b12b42ebf7dc9ac556c153311929 348 SMART SM00382 53 246 5.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1156 2db0edf5fc0742cde9a607c2ffa7b9ac 493 Gene3D G3DSA:3.30.750.24 385 483 1.7E-30 T 14-10-2018 IPR036513 STAS domain superfamily Atu1156 2db0edf5fc0742cde9a607c2ffa7b9ac 493 SUPERFAMILY SSF52091 393 484 1.08E-12 T 14-10-2018 IPR036513 STAS domain superfamily Atu1156 2db0edf5fc0742cde9a607c2ffa7b9ac 493 Pfam PF01740 STAS domain 402 484 3.0E-8 T 14-10-2018 IPR002645 STAS domain Atu1156 2db0edf5fc0742cde9a607c2ffa7b9ac 493 Pfam PF00916 Sulfate permease family 165 356 7.0E-29 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Atu1156 2db0edf5fc0742cde9a607c2ffa7b9ac 493 Pfam PF00916 Sulfate permease family 16 145 7.5E-25 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Atu4001 818d71229e38c1d12d19d0b861b77590 328 SUPERFAMILY SSF53901 6 328 1.24E-47 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4001 818d71229e38c1d12d19d0b861b77590 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 4.4E-21 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atu4001 818d71229e38c1d12d19d0b861b77590 328 Gene3D G3DSA:3.40.47.10 1 328 2.2E-97 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Atu4001 818d71229e38c1d12d19d0b861b77590 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 239 327 4.5E-26 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Atu1059 406f709cbfc47dce37218de3e5816f7e 253 SUPERFAMILY SSF143081 2 232 2.62E-69 T 14-10-2018 IPR036590 SOS response associated peptidase-like Atu1059 406f709cbfc47dce37218de3e5816f7e 253 Gene3D G3DSA:3.90.1680.10 1 232 3.8E-66 T 14-10-2018 IPR036590 SOS response associated peptidase-like Atu1059 406f709cbfc47dce37218de3e5816f7e 253 Pfam PF02586 SOS response associated peptidase (SRAP) 1 221 1.5E-62 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) Atu2319 179392fed51bcbaa531625f9346fcdc8 114 Gene3D G3DSA:1.10.3730.20 6 114 1.5E-35 T 14-10-2018 Atu2319 179392fed51bcbaa531625f9346fcdc8 114 SUPERFAMILY SSF103481 11 109 8.89E-19 T 14-10-2018 Atu2319 179392fed51bcbaa531625f9346fcdc8 114 Pfam PF00893 Small Multidrug Resistance protein 8 98 5.1E-25 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Atu4234 186ece2c5c56c08a1563c2d895053dfe 197 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 2 80 9.9E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4234 186ece2c5c56c08a1563c2d895053dfe 197 SUPERFAMILY SSF161098 3 181 1.28E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu4234 186ece2c5c56c08a1563c2d895053dfe 197 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 4 185 1.9E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4234 186ece2c5c56c08a1563c2d895053dfe 197 Gene3D G3DSA:1.10.3720.10 1 188 1.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu3359 543517584af378a63e1bebdf71d74bad 260 Gene3D G3DSA:1.10.3720.10 39 259 5.3E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu3359 543517584af378a63e1bebdf71d74bad 260 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 46 149 3.1E-19 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu3359 543517584af378a63e1bebdf71d74bad 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 257 1.9E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3359 543517584af378a63e1bebdf71d74bad 260 SUPERFAMILY SSF161098 47 243 1.19E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu0936 7c6ed22d8d8c290ebf234cc77c46089a 202 SUPERFAMILY SSF53335 5 183 1.32E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0936 7c6ed22d8d8c290ebf234cc77c46089a 202 Gene3D G3DSA:3.40.50.150 1 189 9.5E-29 T 14-10-2018 Atu0936 7c6ed22d8d8c290ebf234cc77c46089a 202 Pfam PF13649 Methyltransferase domain 46 127 2.8E-10 T 14-10-2018 Atu0529 1abcd43e66ceb789b6393a1ff573d826 388 SUPERFAMILY SSF53383 9 384 2.13E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu0529 1abcd43e66ceb789b6393a1ff573d826 388 Gene3D G3DSA:3.90.1150.10 30 381 3.8E-99 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu0529 1abcd43e66ceb789b6393a1ff573d826 388 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Atu0529 1abcd43e66ceb789b6393a1ff573d826 388 Pfam PF00155 Aminotransferase class I and II 41 381 2.2E-52 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu0529 1abcd43e66ceb789b6393a1ff573d826 388 Gene3D G3DSA:3.40.640.10 62 284 3.8E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1631 15841fe14c11408580af4537f8ffac05 249 Pfam PF00072 Response regulator receiver domain 116 224 1.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1631 15841fe14c11408580af4537f8ffac05 249 Gene3D G3DSA:3.40.50.12740 113 247 1.9E-29 T 14-10-2018 Atu1631 15841fe14c11408580af4537f8ffac05 249 Gene3D G3DSA:3.40.50.2300 1 112 2.2E-9 T 14-10-2018 Atu1631 15841fe14c11408580af4537f8ffac05 249 SMART SM00448 114 228 3.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1631 15841fe14c11408580af4537f8ffac05 249 SUPERFAMILY SSF52172 113 234 4.27E-31 T 14-10-2018 IPR011006 CheY-like superfamily Atu1631 15841fe14c11408580af4537f8ffac05 249 SUPERFAMILY SSF52172 4 113 1.76E-9 T 14-10-2018 IPR011006 CheY-like superfamily Atu3565 c419c44b7ad9ea8d665952475b26a2ea 326 SUPERFAMILY SSF51658 43 284 3.27E-39 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3565 c419c44b7ad9ea8d665952475b26a2ea 326 Gene3D G3DSA:3.20.20.150 34 316 3.1E-40 T 14-10-2018 Atu3565 c419c44b7ad9ea8d665952475b26a2ea 326 Pfam PF01261 Xylose isomerase-like TIM barrel 48 274 1.4E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4224 a6e29d4395f2a460b68960961bf63efd 416 Gene3D G3DSA:3.30.9.10 114 344 1.7E-102 T 14-10-2018 Atu4224 a6e29d4395f2a460b68960961bf63efd 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 2 406 1.9E-222 T 14-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4224 a6e29d4395f2a460b68960961bf63efd 416 Gene3D G3DSA:3.50.50.60 33 388 1.7E-102 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4224 a6e29d4395f2a460b68960961bf63efd 416 SUPERFAMILY SSF54373 272 337 1.59E-5 T 14-10-2018 Atu4224 a6e29d4395f2a460b68960961bf63efd 416 SUPERFAMILY SSF51905 31 403 2.75E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4224 a6e29d4395f2a460b68960961bf63efd 416 Pfam PF01266 FAD dependent oxidoreductase 33 379 1.1E-58 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu4407 5abd2a9a513ba697ca080951f76e3949 95 Hamap MF_02200 Chaperone NapD [napD]. 8 83 15.967 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Atu4407 5abd2a9a513ba697ca080951f76e3949 95 Pfam PF03927 NapD protein 8 81 4.8E-22 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Atu4407 5abd2a9a513ba697ca080951f76e3949 95 Gene3D G3DSA:3.30.70.920 8 76 1.7E-15 T 14-10-2018 Atu2144 c92a1d9389c496bba305324ff4d5cab3 257 PIRSF PIRSF029730 2 257 1.7E-102 T 14-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 Atu2144 c92a1d9389c496bba305324ff4d5cab3 257 SUPERFAMILY SSF53187 15 255 2.86E-77 T 14-10-2018 Atu2144 c92a1d9389c496bba305324ff4d5cab3 257 Pfam PF05013 N-formylglutamate amidohydrolase 26 231 5.8E-42 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase Atu2144 c92a1d9389c496bba305324ff4d5cab3 257 Gene3D G3DSA:3.40.630.40 15 257 6.5E-93 T 14-10-2018 Atu2363 696bd67582b0fb896e224caf891fe07a 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 223 1.4E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2363 696bd67582b0fb896e224caf891fe07a 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 120 1.0E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu2363 696bd67582b0fb896e224caf891fe07a 229 SUPERFAMILY SSF161098 10 211 7.06E-35 T 14-10-2018 IPR035906 MetI-like superfamily Atu2363 696bd67582b0fb896e224caf891fe07a 229 Gene3D G3DSA:1.10.3720.10 1 226 3.0E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu1881 b4b441b2f53ceec66c83af4b45f384f1 276 SUPERFAMILY SSF161098 60 257 6.8E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu1881 b4b441b2f53ceec66c83af4b45f384f1 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 269 2.9E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1881 b4b441b2f53ceec66c83af4b45f384f1 276 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 61 166 1.4E-20 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1881 b4b441b2f53ceec66c83af4b45f384f1 276 Gene3D G3DSA:1.10.3720.10 48 273 9.2E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 SMART SM00633 71 351 3.5E-39 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 Gene3D G3DSA:3.20.20.80 27 353 4.5E-80 T 14-10-2018 Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 Pfam PF00331 Glycosyl hydrolase family 10 32 347 4.3E-67 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 SUPERFAMILY SSF51445 36 350 4.82E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 PRINTS PR00134 Glycosyl hydrolase family 10 signature 102 114 1.1E-9 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 PRINTS PR00134 Glycosyl hydrolase family 10 signature 224 236 1.1E-9 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 PRINTS PR00134 Glycosyl hydrolase family 10 signature 191 202 1.1E-9 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Atu2371 ac7095ce73a09a1fa160d6622e015aee 355 PRINTS PR00134 Glycosyl hydrolase family 10 signature 144 155 1.1E-9 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Atu3472 d795760812db39ac4450440d05394664 337 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 1.0E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu3472 d795760812db39ac4450440d05394664 337 Pfam PF02780 Transketolase, C-terminal domain 210 327 8.0E-38 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Atu3472 d795760812db39ac4450440d05394664 337 SMART SM00861 4 179 1.8E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Atu3472 d795760812db39ac4450440d05394664 337 Gene3D G3DSA:3.40.50.920 204 337 1.3E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu3472 d795760812db39ac4450440d05394664 337 SUPERFAMILY SSF52518 1 220 1.18E-72 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu3472 d795760812db39ac4450440d05394664 337 SUPERFAMILY SSF52922 205 335 1.31E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Atu3472 d795760812db39ac4450440d05394664 337 Gene3D G3DSA:3.40.50.970 1 203 3.3E-93 T 14-10-2018 Atu0157 c5fdc385542726345342ad28495359c6 333 Pfam PF09084 NMT1/THI5 like 52 261 1.1E-19 T 14-10-2018 IPR015168 SsuA/THI5-like Atu0157 c5fdc385542726345342ad28495359c6 333 Gene3D G3DSA:3.40.190.10 35 149 6.8E-13 T 14-10-2018 Atu0157 c5fdc385542726345342ad28495359c6 333 SMART SM00062 44 267 0.0016 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu0157 c5fdc385542726345342ad28495359c6 333 Gene3D G3DSA:3.40.190.10 150 333 5.5E-27 T 14-10-2018 Atu0157 c5fdc385542726345342ad28495359c6 333 SUPERFAMILY SSF53850 44 262 1.62E-37 T 14-10-2018 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 Gene3D G3DSA:3.40.50.1820 46 325 5.4E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 SUPERFAMILY SSF53474 45 325 6.37E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 141 154 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 112 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 269 283 1.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 PRINTS PR00412 Epoxide hydrolase signature 97 112 5.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 PRINTS PR00412 Epoxide hydrolase signature 77 95 5.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 PRINTS PR00412 Epoxide hydrolase signature 267 283 5.3E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu4778 b434f3c56f0820f5631d799b5bf8e400 326 Pfam PF00561 alpha/beta hydrolase fold 72 306 9.7E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3494 d10fe7d85824dcf4585ec6dc5fd3b531 231 SUPERFAMILY SSF53335 17 217 3.16E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3494 d10fe7d85824dcf4585ec6dc5fd3b531 231 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 49 182 5.0E-11 T 14-10-2018 IPR006342 Methyltransferase FkbM Atu3494 d10fe7d85824dcf4585ec6dc5fd3b531 231 Pfam PF05050 Methyltransferase FkbM domain 71 204 6.1E-11 T 14-10-2018 IPR006342 Methyltransferase FkbM Atu3494 d10fe7d85824dcf4585ec6dc5fd3b531 231 Gene3D G3DSA:3.40.50.150 34 209 9.1E-18 T 14-10-2018 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 SUPERFAMILY SSF53850 91 293 8.01E-41 T 14-10-2018 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 Pfam PF03466 LysR substrate binding domain 90 292 3.2E-46 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 SUPERFAMILY SSF46785 4 113 7.33E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 Gene3D G3DSA:1.10.10.10 2 88 3.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 Gene3D G3DSA:3.40.190.10 94 291 1.6E-61 T 14-10-2018 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 7.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 Gene3D G3DSA:3.40.190.10 164 262 1.6E-61 T 14-10-2018 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4641 24b9fe841eb44c50513e7a01a838cb15 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 SUPERFAMILY SSF53850 96 290 1.36E-27 T 14-10-2018 Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 Gene3D G3DSA:3.40.190.10 164 263 2.2E-47 T 14-10-2018 Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 SUPERFAMILY SSF46785 6 86 3.55E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 3.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 Gene3D G3DSA:1.10.10.10 8 94 2.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 Pfam PF03466 LysR substrate binding domain 96 290 4.1E-25 T 14-10-2018 IPR005119 LysR, substrate-binding Atu6055 3f7ee9ec98ccc793d0d9a1c9fcfe2a5d 298 Gene3D G3DSA:3.40.190.10 104 288 2.2E-47 T 14-10-2018 Atu3617 100ff360232749fc39a86adb2cdc9aa0 96 SUPERFAMILY SSF143800 1 84 4.51E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3617 100ff360232749fc39a86adb2cdc9aa0 96 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 20.423 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3617 100ff360232749fc39a86adb2cdc9aa0 96 Gene3D G3DSA:2.30.170.40 2 76 1.1E-27 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu3617 100ff360232749fc39a86adb2cdc9aa0 96 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.2E-24 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3617 100ff360232749fc39a86adb2cdc9aa0 96 Pfam PF00830 Ribosomal L28 family 3 61 4.0E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 Pfam PF00005 ABC transporter 271 422 1.1E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 SUPERFAMILY SSF52540 3 221 4.49E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 Gene3D G3DSA:3.40.50.300 249 488 5.0E-47 T 14-10-2018 Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 Gene3D G3DSA:3.40.50.300 2 235 5.1E-57 T 14-10-2018 Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 SMART SM00382 30 218 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 SMART SM00382 279 471 4.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 SUPERFAMILY SSF52540 246 480 3.95E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1898 e07f3ece62b3b84d8992b2593700fd08 492 Pfam PF00005 ABC transporter 21 170 2.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 SUPERFAMILY SSF53850 26 364 1.19E-102 T 14-10-2018 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 Gene3D G3DSA:3.40.190.10 29 333 3.5E-138 T 14-10-2018 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 Pfam PF13416 Bacterial extracellular solute-binding protein 43 330 2.1E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PIRSF PIRSF019574 1 365 2.1E-140 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.6E-68 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Atu0609 5e2a2d7d2d0df80ab3e407d8cf79c39d 365 Gene3D G3DSA:3.40.190.10 133 359 3.5E-138 T 14-10-2018 Atu6047 70322a243b94e4b39727a9b4617461a8 369 Pfam PF11972 HTH DNA binding domain 316 369 2.3E-27 T 14-10-2018 IPR021068 HTH DNA binding domain Atu6047 70322a243b94e4b39727a9b4617461a8 369 Pfam PF07756 Protein of unknown function (DUF1612) 182 308 5.4E-52 T 14-10-2018 IPR011670 Protein of unknown function DUF1612 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.1E-13 T 14-10-2018 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 314 330 9.1E-13 T 14-10-2018 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 314 9.1E-13 T 14-10-2018 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 139 154 9.1E-13 T 14-10-2018 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 Gene3D G3DSA:3.30.9.60 72 288 4.6E-107 T 14-10-2018 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 SUPERFAMILY SSF54373 164 292 3.73E-34 T 14-10-2018 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 Gene3D G3DSA:3.50.50.60 6 353 4.6E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4770 cb196bbb9ec54361983671d715fe70c3 370 SUPERFAMILY SSF51905 8 366 5.26E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4770 cb196bbb9ec54361983671d715fe70c3 370 Pfam PF01494 FAD binding domain 7 181 1.8E-7 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu4770 cb196bbb9ec54361983671d715fe70c3 370 Pfam PF01494 FAD binding domain 290 358 2.8E-5 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu5328 241423e4d752a3df96e204005ebc0f3a 349 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 332 1.1E-22 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Atu5328 241423e4d752a3df96e204005ebc0f3a 349 Gene3D G3DSA:3.40.50.720 32 323 4.8E-98 T 14-10-2018 Atu5328 241423e4d752a3df96e204005ebc0f3a 349 SUPERFAMILY SSF52283 24 157 1.78E-25 T 14-10-2018 Atu5328 241423e4d752a3df96e204005ebc0f3a 349 Gene3D G3DSA:3.40.50.720 117 308 4.8E-98 T 14-10-2018 Atu5328 241423e4d752a3df96e204005ebc0f3a 349 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 245 261 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu5328 241423e4d752a3df96e204005ebc0f3a 349 SUPERFAMILY SSF51735 124 307 5.05E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5328 241423e4d752a3df96e204005ebc0f3a 349 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 216 238 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu5328 241423e4d752a3df96e204005ebc0f3a 349 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 130 306 1.3E-58 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 2.5E-125 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.9E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.9E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.9E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.9E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.9E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.9E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 148 2.3E-57 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 Gene3D G3DSA:3.90.226.10 1 316 7.3E-113 T 14-10-2018 Atu3630 c9524badb208bc4062d3b816314a7cfc 317 SUPERFAMILY SSF52096 4 315 1.17E-95 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3630 c9524badb208bc4062d3b816314a7cfc 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 316 48.007 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Atu4141 02b4f34490566495f4c6008e92a4c2c4 146 Gene3D G3DSA:3.30.1330.80 4 145 4.0E-41 T 14-10-2018 Atu4141 02b4f34490566495f4c6008e92a4c2c4 146 PIRSF PIRSF016702 1 146 2.6E-42 T 14-10-2018 IPR025707 Predicted DNA-binding protein with PD1-like DNA-binding motif Atu4141 02b4f34490566495f4c6008e92a4c2c4 146 SUPERFAMILY SSF117856 9 141 3.4E-32 T 14-10-2018 Atu4141 02b4f34490566495f4c6008e92a4c2c4 146 Pfam PF03479 Domain of unknown function (DUF296) 12 125 2.3E-19 T 14-10-2018 IPR005175 PPC domain Atu3348 760bda8797734ddde44a4f480e3bd6dd 254 Pfam PF01261 Xylose isomerase-like TIM barrel 21 212 6.6E-15 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu3348 760bda8797734ddde44a4f480e3bd6dd 254 SUPERFAMILY SSF51658 8 236 1.01E-37 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3348 760bda8797734ddde44a4f480e3bd6dd 254 Gene3D G3DSA:3.20.20.150 1 253 2.2E-53 T 14-10-2018 Atu6098 7d2f11f1b7aa18961ca595c3e9d83486 153 SMART SM00530 33 90 6.6E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu6098 7d2f11f1b7aa18961ca595c3e9d83486 153 TIGRFAM TIGR02612 mob_myst_A: mobile mystery protein A 6 152 1.5E-66 T 14-10-2018 IPR013435 Mobile mystery protein A Atu6098 7d2f11f1b7aa18961ca595c3e9d83486 153 Gene3D G3DSA:1.10.260.40 31 98 1.3E-11 T 14-10-2018 Atu6098 7d2f11f1b7aa18961ca595c3e9d83486 153 SUPERFAMILY SSF47413 34 92 3.75E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu6098 7d2f11f1b7aa18961ca595c3e9d83486 153 Pfam PF01381 Helix-turn-helix 34 89 5.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu4684 9c779768a7e3a5cfb32afb9e94b1f1a5 342 Gene3D G3DSA:3.10.310.10 7 335 1.4E-109 T 14-10-2018 Atu4684 9c779768a7e3a5cfb32afb9e94b1f1a5 342 Pfam PF05544 Proline racemase 9 334 6.1E-136 T 14-10-2018 IPR008794 Proline racemase family Atu4684 9c779768a7e3a5cfb32afb9e94b1f1a5 342 Gene3D G3DSA:3.10.310.10 145 312 1.4E-109 T 14-10-2018 Atu4684 9c779768a7e3a5cfb32afb9e94b1f1a5 342 SUPERFAMILY SSF54506 1 333 2.3E-106 T 14-10-2018 Atu4684 9c779768a7e3a5cfb32afb9e94b1f1a5 342 PIRSF PIRSF029792 1 336 1.1E-114 T 14-10-2018 IPR008794 Proline racemase family Atu3165 8d530da1407b54f29b9a8c41b64fad9b 417 SUPERFAMILY SSF53850 3 410 2.41E-74 T 14-10-2018 Atu3165 8d530da1407b54f29b9a8c41b64fad9b 417 Gene3D G3DSA:3.40.190.10 118 403 1.2E-142 T 14-10-2018 Atu3165 8d530da1407b54f29b9a8c41b64fad9b 417 Pfam PF01547 Bacterial extracellular solute-binding protein 21 307 1.1E-45 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3165 8d530da1407b54f29b9a8c41b64fad9b 417 Gene3D G3DSA:3.40.190.10 22 374 1.2E-142 T 14-10-2018 Atu1706 f23c0bb03a9b43b542466c6c31bebdb3 70 Pfam PF02416 mttA/Hcf106 family 5 48 4.1E-12 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Atu1706 f23c0bb03a9b43b542466c6c31bebdb3 70 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 3.1E-23 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Atu1706 f23c0bb03a9b43b542466c6c31bebdb3 70 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 70 22.912 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 PRINTS PR00625 DnaJ domain signature 155 173 7.6E-12 T 14-10-2018 IPR001623 DnaJ domain Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 PRINTS PR00625 DnaJ domain signature 190 210 7.6E-12 T 14-10-2018 IPR001623 DnaJ domain Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 PRINTS PR00625 DnaJ domain signature 173 188 7.6E-12 T 14-10-2018 IPR001623 DnaJ domain Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 Gene3D G3DSA:1.10.287.110 135 209 4.5E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 SUPERFAMILY SSF46565 139 207 2.62E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 SMART SM00271 152 210 1.0E-15 T 14-10-2018 IPR001623 DnaJ domain Atu3623 d082b4baf9d7be3e8b268044afd5e43d 211 Pfam PF00226 DnaJ domain 154 207 3.5E-15 T 14-10-2018 IPR001623 DnaJ domain Atu5266 0d27e4655d781d727e4de13ebd92c696 465 Gene3D G3DSA:3.30.565.10 323 451 9.7E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5266 0d27e4655d781d727e4de13ebd92c696 465 PIRSF PIRSF037314 1 465 8.1E-201 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS Atu5266 0d27e4655d781d727e4de13ebd92c696 465 Pfam PF07730 Histidine kinase 250 317 2.0E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Atu5266 0d27e4655d781d727e4de13ebd92c696 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 451 7.8E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu5266 0d27e4655d781d727e4de13ebd92c696 465 Pfam PF17200 Single Cache domain 2 47 191 4.8E-36 T 14-10-2018 IPR033480 Single Cache domain 2 Atu5266 0d27e4655d781d727e4de13ebd92c696 465 SUPERFAMILY SSF55874 321 449 1.96E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5266 0d27e4655d781d727e4de13ebd92c696 465 Gene3D G3DSA:3.30.450.20 31 202 6.5E-40 T 14-10-2018 Atu5266 0d27e4655d781d727e4de13ebd92c696 465 SMART SM01049 42 133 3.8E-22 T 14-10-2018 IPR033480 Single Cache domain 2 Atu5266 0d27e4655d781d727e4de13ebd92c696 465 SMART SM00387 355 452 5.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu1575 1fd2c9a632a1356323ee57a316c5cf28 395 Gene3D G3DSA:3.90.1150.10 259 392 6.1E-36 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1575 1fd2c9a632a1356323ee57a316c5cf28 395 Gene3D G3DSA:3.40.640.10 10 258 6.5E-71 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1575 1fd2c9a632a1356323ee57a316c5cf28 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 389 9.9E-101 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu1575 1fd2c9a632a1356323ee57a316c5cf28 395 PIRSF PIRSF001434 1 393 3.8E-118 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu1575 1fd2c9a632a1356323ee57a316c5cf28 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 15 391 2.1E-168 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Atu1575 1fd2c9a632a1356323ee57a316c5cf28 395 SUPERFAMILY SSF53383 50 390 4.44E-92 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu5127 f4d4b17a817fd7cbf487348c76b99f0f 300 SUPERFAMILY SSF161098 33 288 4.45E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu5127 f4d4b17a817fd7cbf487348c76b99f0f 300 Gene3D G3DSA:1.10.3720.10 30 295 1.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu5127 f4d4b17a817fd7cbf487348c76b99f0f 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 286 2.6E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4317 10cd58725ed344ef077da46def99692c 190 Gene3D G3DSA:1.10.357.10 2 189 5.6E-48 T 14-10-2018 Atu4317 10cd58725ed344ef077da46def99692c 190 SUPERFAMILY SSF46689 3 77 3.49E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4317 10cd58725ed344ef077da46def99692c 190 SUPERFAMILY SSF48498 120 186 4.25E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu4317 10cd58725ed344ef077da46def99692c 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 3.9E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4317 10cd58725ed344ef077da46def99692c 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4317 10cd58725ed344ef077da46def99692c 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.3E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 SUPERFAMILY SSF52172 1 118 5.55E-36 T 14-10-2018 IPR011006 CheY-like superfamily Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 SMART SM00862 146 221 8.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 SMART SM00448 1 112 8.1E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 SUPERFAMILY SSF46894 123 222 6.24E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 Pfam PF00072 Response regulator receiver domain 3 113 1.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 Gene3D G3DSA:1.10.10.10 124 225 2.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0629 74ccd49d6880d3b6c4f2bad89d4396c5 225 Gene3D G3DSA:3.40.50.2300 1 120 9.2E-35 T 14-10-2018 Atu4434 181892ed387b973b0e44a29718fbaccd 278 SMART SM00382 33 232 1.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4434 181892ed387b973b0e44a29718fbaccd 278 Pfam PF00005 ABC transporter 28 183 8.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4434 181892ed387b973b0e44a29718fbaccd 278 Gene3D G3DSA:3.40.50.300 3 277 7.9E-76 T 14-10-2018 Atu4434 181892ed387b973b0e44a29718fbaccd 278 SUPERFAMILY SSF52540 5 243 1.16E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 SUPERFAMILY SSF51419 26 250 1.21E-54 T 14-10-2018 IPR029066 PLP-binding barrel Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 Gene3D G3DSA:2.40.37.10 27 386 3.5E-103 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 TIGRFAM TIGR00492 alr: alanine racemase 24 387 6.2E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 SUPERFAMILY SSF50621 244 387 3.31E-38 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 Pfam PF00842 Alanine racemase, C-terminal domain 250 386 3.4E-35 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 49 59 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 Hamap MF_01201 Alanine racemase. 19 387 28.416 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 Pfam PF01168 Alanine racemase, N-terminal domain 26 237 1.4E-50 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 SMART SM01005 250 387 4.1E-53 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 80 98 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 283 298 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 44 60 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 174 185 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 140 152 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 212 239 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 PRINTS PR00992 Alanine racemase signature 266 281 2.2E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu1080 829804b01a5c3d8eacdb4721f1da71e2 391 Gene3D G3DSA:3.20.20.10 28 237 3.5E-103 T 14-10-2018 IPR029066 PLP-binding barrel Atu2571 60ea0d51b7aa02583467cb2676079240 83 SUPERFAMILY SSF47336 3 74 1.96E-16 T 14-10-2018 IPR036736 ACP-like superfamily Atu2571 60ea0d51b7aa02583467cb2676079240 83 Gene3D G3DSA:1.10.1200.10 1 83 1.7E-24 T 14-10-2018 IPR036736 ACP-like superfamily Atu2571 60ea0d51b7aa02583467cb2676079240 83 Pfam PF00550 Phosphopantetheine attachment site 5 71 5.8E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu6012 9ab897f2b64dc04e476eebf93890c134 240 Gene3D G3DSA:3.40.50.300 1 124 1.8E-50 T 14-10-2018 Atu6012 9ab897f2b64dc04e476eebf93890c134 240 Gene3D G3DSA:1.10.287.890 125 225 6.5E-37 T 14-10-2018 Atu6012 9ab897f2b64dc04e476eebf93890c134 240 SUPERFAMILY SSF52540 5 129 8.69E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6012 9ab897f2b64dc04e476eebf93890c134 240 PIRSF PIRSF000507 1 240 8.1E-101 T 14-10-2018 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 Atu6012 9ab897f2b64dc04e476eebf93890c134 240 Pfam PF01745 Isopentenyl transferase 1 227 9.1E-104 T 14-10-2018 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 Atu4015 90bd7de9875400b3accb1e2d7bd095ff 371 Pfam PF07756 Protein of unknown function (DUF1612) 184 309 3.2E-53 T 14-10-2018 IPR011670 Protein of unknown function DUF1612 Atu4015 90bd7de9875400b3accb1e2d7bd095ff 371 Pfam PF11972 HTH DNA binding domain 318 371 8.1E-27 T 14-10-2018 IPR021068 HTH DNA binding domain Atu5316 a3db1dd0ecda3ce501b4cb1bfcd73b30 281 SMART SM00382 36 232 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5316 a3db1dd0ecda3ce501b4cb1bfcd73b30 281 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5316 a3db1dd0ecda3ce501b4cb1bfcd73b30 281 SUPERFAMILY SSF52540 12 234 3.04E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5316 a3db1dd0ecda3ce501b4cb1bfcd73b30 281 Gene3D G3DSA:3.40.50.300 4 253 2.1E-62 T 14-10-2018 Atu5316 a3db1dd0ecda3ce501b4cb1bfcd73b30 281 Pfam PF00005 ABC transporter 28 175 1.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 SUPERFAMILY SSF55282 8 184 5.18E-77 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 Gene3D G3DSA:3.30.1440.10 4 184 2.8E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 Pfam PF00673 ribosomal L5P family C-terminus 89 182 1.6E-42 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 6 184 42.002 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 ProSitePatterns PS00358 Ribosomal protein L5 signature. 62 78 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 Pfam PF00281 Ribosomal protein L5 29 85 2.6E-25 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1934 cef130d5b8ccf0a3d952102a3cec068b 184 PIRSF PIRSF002161 3 184 4.0E-64 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1243 d373edc3f2d0c06a779ccd59ab5618b4 281 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 12 259 8.1E-65 T 14-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 Atu1243 d373edc3f2d0c06a779ccd59ab5618b4 281 Gene3D G3DSA:3.90.1200.10 129 257 1.3E-7 T 14-10-2018 Atu1243 d373edc3f2d0c06a779ccd59ab5618b4 281 SUPERFAMILY SSF56112 12 263 8.91E-33 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu4561 a74f2959f524a9c6c72c12b284ed0c84 364 Pfam PF07470 Glycosyl Hydrolase Family 88 44 356 2.2E-100 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 Atu4561 a74f2959f524a9c6c72c12b284ed0c84 364 Gene3D G3DSA:1.50.10.10 2 359 8.1E-107 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu4561 a74f2959f524a9c6c72c12b284ed0c84 364 SUPERFAMILY SSF48208 41 355 4.76E-70 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu4245 97d04877cbaac5d850f312e89e20032d 266 Gene3D G3DSA:1.10.3720.10 9 264 3.6E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu4245 97d04877cbaac5d850f312e89e20032d 266 SUPERFAMILY SSF161098 11 259 1.12E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu4245 97d04877cbaac5d850f312e89e20032d 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 261 1.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 SUPERFAMILY SSF46689 2 86 2.62E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 Gene3D G3DSA:1.10.357.10 52 185 3.7E-33 T 14-10-2018 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 Gene3D G3DSA:1.10.10.60 5 51 1.7E-16 T 14-10-2018 Atu4217 56c2fbf10fda0823f3235cead92071f8 195 SUPERFAMILY SSF48498 81 181 1.86E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu6122 d9f18b945c51450d1bcc154b499cc167 104 SUPERFAMILY SSF50199 3 99 2.09E-16 T 14-10-2018 Atu6122 d9f18b945c51450d1bcc154b499cc167 104 Pfam PF00565 Staphylococcal nuclease homologue 16 93 2.3E-7 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Atu6122 d9f18b945c51450d1bcc154b499cc167 104 Gene3D G3DSA:2.40.50.90 1 91 3.3E-15 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily Atu3216 30c0ffc7e1fea0684c30b798254c24c6 261 SMART SM00382 34 226 7.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3216 30c0ffc7e1fea0684c30b798254c24c6 261 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3216 30c0ffc7e1fea0684c30b798254c24c6 261 Gene3D G3DSA:3.40.50.300 3 260 4.6E-84 T 14-10-2018 Atu3216 30c0ffc7e1fea0684c30b798254c24c6 261 SUPERFAMILY SSF52540 5 247 1.54E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3216 30c0ffc7e1fea0684c30b798254c24c6 261 Pfam PF00005 ABC transporter 25 176 6.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4794 622391439a1a18e5f708ed06f601f470 720 Gene3D G3DSA:3.40.50.300 438 686 1.2E-46 T 14-10-2018 Atu4794 622391439a1a18e5f708ed06f601f470 720 SUPERFAMILY SSF52540 506 686 1.57E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4794 622391439a1a18e5f708ed06f601f470 720 Pfam PF13614 AAA domain 508 642 5.1E-7 T 14-10-2018 IPR025669 AAA domain Atu0104 c7f6abb2adf5c4d5a9b967f0414e6ad2 152 Gene3D G3DSA:3.90.960.10 1 152 1.7E-41 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atu0104 c7f6abb2adf5c4d5a9b967f0414e6ad2 152 SUPERFAMILY SSF55826 5 151 2.22E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Atu0104 c7f6abb2adf5c4d5a9b967f0414e6ad2 152 Pfam PF04073 Aminoacyl-tRNA editing domain 27 140 3.1E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 Gene3D G3DSA:1.25.40.20 7 102 9.3E-13 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 Pfam PF12796 Ankyrin repeats (3 copies) 74 154 1.2E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 SMART SM00248 93 119 170.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 SMART SM00248 123 154 13.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 SMART SM00248 158 185 4000.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 SMART SM00248 60 89 14.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 SMART SM00248 26 55 1400.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 SUPERFAMILY SSF48403 25 183 4.98E-30 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Atu1798 ccbe4a21dcb066c159eecefecce1c9fd 185 Gene3D G3DSA:1.25.40.20 103 185 1.1E-19 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Atu8181 1abe359e946174627d582d0d1743309b 161 SUPERFAMILY SSF54427 21 150 6.5E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu5455 c07922754763b08b94a2de5bb7c3a8ff 215 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 40 194 6.1E-16 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Atu5455 c07922754763b08b94a2de5bb7c3a8ff 215 SUPERFAMILY SSF52266 30 204 1.83E-36 T 14-10-2018 Atu5455 c07922754763b08b94a2de5bb7c3a8ff 215 Gene3D G3DSA:3.40.50.1110 14 206 2.1E-29 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 SUPERFAMILY SSF51338 24 381 1.53E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 Pfam PF13382 Adenine deaminase C-terminal domain 419 584 2.3E-39 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 Hamap MF_01518 Adenine deaminase [ade]. 33 589 32.087 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 Gene3D G3DSA:3.20.20.140 87 332 1.6E-126 T 14-10-2018 Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 Gene3D G3DSA:2.30.40.10 25 369 1.6E-126 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 Pfam PF01979 Amidohydrolase family 83 368 3.4E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu4426 8f1fd34a303deb6361f7da60fd534e14 597 SUPERFAMILY SSF51556 87 337 7.83E-21 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2324 2636bb7de93fd2fa1e6e94c0cdc0cc0a 166 Hamap MF_00616 Ureidoglycolate lyase [allA]. 3 163 43.886 T 14-10-2018 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atu2324 2636bb7de93fd2fa1e6e94c0cdc0cc0a 166 PIRSF PIRSF017306 4 157 8.0E-37 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atu2324 2636bb7de93fd2fa1e6e94c0cdc0cc0a 166 Pfam PF04115 Ureidoglycolate lyase 4 161 1.7E-48 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atu2324 2636bb7de93fd2fa1e6e94c0cdc0cc0a 166 Gene3D G3DSA:2.60.120.480 3 165 5.3E-49 T 14-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 Atu2324 2636bb7de93fd2fa1e6e94c0cdc0cc0a 166 SUPERFAMILY SSF51182 5 161 4.45E-53 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu2419 872638f4301c11496fd6d06d60076930 309 Pfam PF00072 Response regulator receiver domain 13 125 1.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2419 872638f4301c11496fd6d06d60076930 309 SMART SM00448 11 124 6.2E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2419 872638f4301c11496fd6d06d60076930 309 Pfam PF00196 Bacterial regulatory proteins, luxR family 248 302 1.2E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2419 872638f4301c11496fd6d06d60076930 309 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 278 290 1.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2419 872638f4301c11496fd6d06d60076930 309 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 262 278 1.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2419 872638f4301c11496fd6d06d60076930 309 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 248 262 1.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2419 872638f4301c11496fd6d06d60076930 309 SUPERFAMILY SSF52172 13 143 1.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily Atu2419 872638f4301c11496fd6d06d60076930 309 SMART SM00421 245 302 1.9E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu2419 872638f4301c11496fd6d06d60076930 309 SUPERFAMILY SSF46894 237 303 6.46E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu2419 872638f4301c11496fd6d06d60076930 309 Gene3D G3DSA:1.10.10.10 251 308 9.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2419 872638f4301c11496fd6d06d60076930 309 Gene3D G3DSA:3.40.50.12740 12 250 1.0E-44 T 14-10-2018 Atu1335 15082bd8c4d30dd1e41ff5836b7de6c1 227 SUPERFAMILY SSF46785 7 89 4.33E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1335 15082bd8c4d30dd1e41ff5836b7de6c1 227 SMART SM00418 9 88 3.3E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1335 15082bd8c4d30dd1e41ff5836b7de6c1 227 Pfam PF12840 Helix-turn-helix domain 9 68 3.4E-13 T 14-10-2018 Atu1335 15082bd8c4d30dd1e41ff5836b7de6c1 227 Gene3D G3DSA:1.10.10.10 4 93 3.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3044 bb5c1673591cb3246cf63b2529b81b3b 314 SUPERFAMILY SSF56235 4 303 1.74E-86 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu3044 bb5c1673591cb3246cf63b2529b81b3b 314 Pfam PF01112 Asparaginase 5 301 8.2E-96 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 Atu3044 bb5c1673591cb3246cf63b2529b81b3b 314 Gene3D G3DSA:3.60.20.30 174 313 1.7E-41 T 14-10-2018 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 Pfam PF00330 Aconitase family (aconitate hydratase) 9 460 2.7E-161 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.1E-244 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 Gene3D G3DSA:3.30.499.20 6 289 1.7E-104 T 14-10-2018 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 ProSitePatterns PS00450 Aconitase family signature 1. 342 358 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 198 211 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 85 98 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 289 303 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 346 357 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 111 119 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 402 415 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 122 135 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 212 225 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 PRINTS PR00415 Aconitase family signature 136 151 4.1E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 469 60.613 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 Gene3D G3DSA:3.30.499.10 326 469 5.8E-52 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atu2709 1d91d87d6e7c6bd470b9d0bc76cd5182 469 SUPERFAMILY SSF53732 4 468 6.02E-171 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Atu2698 a130f9cafd54dc3b85d216e1c1d60917 105 SUPERFAMILY SSF48600 2 93 1.53E-25 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atu2698 a130f9cafd54dc3b85d216e1c1d60917 105 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 6 99 1.5E-47 T 14-10-2018 IPR010951 Chorismate mutase, bacteria Atu2698 a130f9cafd54dc3b85d216e1c1d60917 105 Gene3D G3DSA:1.20.59.10 1 104 4.0E-43 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atu2698 a130f9cafd54dc3b85d216e1c1d60917 105 Pfam PF01817 Chorismate mutase type II 14 89 7.4E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atu2698 a130f9cafd54dc3b85d216e1c1d60917 105 SMART SM00830 14 94 1.1E-22 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Atu5214 f92fd017ed0892efa4f987df999a5e40 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 247 1.4E-59 T 14-10-2018 Atu5214 f92fd017ed0892efa4f987df999a5e40 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu5214 f92fd017ed0892efa4f987df999a5e40 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 186 0.0049 T 14-10-2018 Atu5214 f92fd017ed0892efa4f987df999a5e40 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.8E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5214 f92fd017ed0892efa4f987df999a5e40 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.8E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5214 f92fd017ed0892efa4f987df999a5e40 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.8E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5214 f92fd017ed0892efa4f987df999a5e40 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5214 f92fd017ed0892efa4f987df999a5e40 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.8E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5214 f92fd017ed0892efa4f987df999a5e40 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.8E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5214 f92fd017ed0892efa4f987df999a5e40 251 Gene3D G3DSA:3.40.50.720 2 251 2.5E-80 T 14-10-2018 Atu5214 f92fd017ed0892efa4f987df999a5e40 251 SUPERFAMILY SSF51735 6 248 5.61E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1913 8c8ab4fd6b89d3dde89cfb783fbeb46d 104 Pfam PF08980 Domain of unknown function (DUF1883) 6 93 6.0E-38 T 14-10-2018 IPR015073 Domain of unknown function DUF1883 Atu1913 8c8ab4fd6b89d3dde89cfb783fbeb46d 104 Gene3D G3DSA:4.10.1210.10 1 104 1.0E-43 T 14-10-2018 IPR036488 Atu1913-like superfamily Atu1913 8c8ab4fd6b89d3dde89cfb783fbeb46d 104 SUPERFAMILY SSF141099 4 103 5.1E-35 T 14-10-2018 IPR036488 Atu1913-like superfamily Atu0141 b0659cfbe502508c51e824f5c386d038 667 Gene3D G3DSA:1.20.210.10 40 573 2.8E-191 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 8.9E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 SUPERFAMILY SSF81442 53 569 6.28E-181 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 514 1.7E-138 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0141 b0659cfbe502508c51e824f5c386d038 667 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 656 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 Atu0141 b0659cfbe502508c51e824f5c386d038 667 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu2496 4962e887292c6682fa8033d73f1911f8 196 Pfam PF00881 Nitroreductase family 18 174 9.9E-15 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu2496 4962e887292c6682fa8033d73f1911f8 196 SUPERFAMILY SSF55469 12 193 1.31E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu2496 4962e887292c6682fa8033d73f1911f8 196 Gene3D G3DSA:3.40.109.10 2 193 1.7E-27 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu2496 4962e887292c6682fa8033d73f1911f8 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.645 T 14-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 Hamap MF_00415 Flagellar L-ring protein [flgH]. 4 237 25.193 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 Pfam PF02107 Flagellar L-ring protein 62 238 2.0E-53 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 PRINTS PR01008 Flagellar L-ring protein signature 216 230 3.2E-34 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 PRINTS PR01008 Flagellar L-ring protein signature 153 168 3.2E-34 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 PRINTS PR01008 Flagellar L-ring protein signature 81 93 3.2E-34 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 PRINTS PR01008 Flagellar L-ring protein signature 179 195 3.2E-34 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu0548 7fff873be5c281f3e393f3884a40bd0d 239 PRINTS PR01008 Flagellar L-ring protein signature 200 214 3.2E-34 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Atu8086 70ea99b98e308ecf69221ed547e1f52f 79 Gene3D G3DSA:3.30.70.2400 6 78 6.8E-33 T 14-10-2018 Atu8086 70ea99b98e308ecf69221ed547e1f52f 79 Pfam PF13773 Domain of unknown function (DUF4170) 8 75 2.2E-39 T 14-10-2018 IPR025226 Protein of unknown function DUF4170 Atu3407 f402df89272db53004f3a0131d6113d6 457 SUPERFAMILY SSF53383 9 444 2.02E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3407 f402df89272db53004f3a0131d6113d6 457 Gene3D G3DSA:3.90.1150.10 10 443 4.3E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3407 f402df89272db53004f3a0131d6113d6 457 PIRSF PIRSF000521 20 446 2.6E-28 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3407 f402df89272db53004f3a0131d6113d6 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu3407 f402df89272db53004f3a0131d6113d6 457 Gene3D G3DSA:3.40.640.10 64 340 4.3E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3407 f402df89272db53004f3a0131d6113d6 457 Pfam PF00202 Aminotransferase class-III 30 442 1.1E-86 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Atu5008 0e6e6228b10400a7040dcbd557502aee 261 Gene3D G3DSA:3.20.20.410 2 234 1.5E-46 T 14-10-2018 IPR036520 UPF0759 superfamily Atu5008 0e6e6228b10400a7040dcbd557502aee 261 Pfam PF01904 Protein of unknown function DUF72 29 231 6.3E-42 T 14-10-2018 IPR002763 Protein of unknown function DUF72 Atu5008 0e6e6228b10400a7040dcbd557502aee 261 SUPERFAMILY SSF117396 9 232 5.62E-56 T 14-10-2018 IPR036520 UPF0759 superfamily Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 SUPERFAMILY SSF53732 5 629 2.09E-223 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 895 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 Pfam PF00694 Aconitase C-terminal domain 694 823 4.2E-43 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 Gene3D G3DSA:3.30.499.10 377 592 2.9E-93 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 173 181 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 495 508 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 206 219 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 149 162 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 220 235 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 282 295 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 296 309 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 433 444 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 PRINTS PR00415 Aconitase family signature 376 390 3.9E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 Gene3D G3DSA:3.30.499.20 8 376 2.7E-159 T 14-10-2018 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 Pfam PF00330 Aconitase family (aconitate hydratase) 78 564 1.9E-183 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 SUPERFAMILY SSF52016 632 894 6.08E-84 T 14-10-2018 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 Gene3D G3DSA:1.10.1440.20 593 653 1.3E-19 T 14-10-2018 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 Gene3D G3DSA:3.20.19.10 657 897 1.2E-99 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Atu2685 da4e802ffe5f2cadb5a83e24f9895459 897 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Atu5225 a4ef54154c6f34278456e21649f6bc15 129 SUPERFAMILY SSF69118 5 121 4.48E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu5225 a4ef54154c6f34278456e21649f6bc15 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 2.9E-20 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu5225 a4ef54154c6f34278456e21649f6bc15 129 Gene3D G3DSA:1.20.1290.10 6 127 9.2E-37 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 34.157 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 Pfam PF01416 tRNA pseudouridine synthase 8 106 7.5E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 Pfam PF01416 tRNA pseudouridine synthase 146 248 4.9E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 Gene3D G3DSA:3.30.70.580 1 108 2.4E-33 T 14-10-2018 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 Gene3D G3DSA:3.30.70.660 109 246 3.8E-44 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 SUPERFAMILY SSF55120 1 254 6.33E-85 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 241 8.7E-58 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0368 727f5ec5a2cf67b09ebacf245c0efce7 266 PIRSF PIRSF001430 1 258 3.6E-72 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu3590 546a33ab3bcb37b2017e53a392091bbc 305 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 274 1.9E-25 T 14-10-2018 IPR017039 Virulence factor BrkB Atu3590 546a33ab3bcb37b2017e53a392091bbc 305 Pfam PF03631 Virulence factor BrkB 21 274 1.9E-47 T 14-10-2018 IPR017039 Virulence factor BrkB Atu3590 546a33ab3bcb37b2017e53a392091bbc 305 PIRSF PIRSF035875 1 295 3.2E-80 T 14-10-2018 IPR017039 Virulence factor BrkB Atu0579 26f664805b206dec14af7c55abfe69d5 157 Pfam PF03963 Flagellar hook capping protein - N-terminal region 7 78 8.1E-24 T 14-10-2018 IPR005648 Flagellar hook capping protein Atu0579 26f664805b206dec14af7c55abfe69d5 157 SUPERFAMILY SSF50346 58 112 3.34E-5 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Atu2826 2ed981cf9dcb9f5bf29418760a85627e 321 Pfam PF01435 Peptidase family M48 67 278 1.7E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Atu2826 2ed981cf9dcb9f5bf29418760a85627e 321 Gene3D G3DSA:3.30.2010.10 57 148 2.9E-31 T 14-10-2018 Atu2826 2ed981cf9dcb9f5bf29418760a85627e 321 Hamap MF_00188 Protease HtpX [htpX]. 3 278 29.156 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Atu3489 54adb33a0cc2b24baf4a8d9922e38d76 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 2.5E-44 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5510 d7237540a83e7c4d6bc24319733a8513 502 SUPERFAMILY SSF52540 250 482 1.2E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5510 d7237540a83e7c4d6bc24319733a8513 502 Gene3D G3DSA:3.40.50.300 247 487 2.1E-49 T 14-10-2018 Atu5510 d7237540a83e7c4d6bc24319733a8513 502 Gene3D G3DSA:3.40.50.300 2 246 5.9E-50 T 14-10-2018 Atu5510 d7237540a83e7c4d6bc24319733a8513 502 PRINTS PR01874 DNA repair protein radA signature 260 288 2.6E-7 T 14-10-2018 Atu5510 d7237540a83e7c4d6bc24319733a8513 502 PRINTS PR01874 DNA repair protein radA signature 401 429 2.6E-7 T 14-10-2018 Atu5510 d7237540a83e7c4d6bc24319733a8513 502 SMART SM00382 26 217 0.0032 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5510 d7237540a83e7c4d6bc24319733a8513 502 SMART SM00382 268 432 0.0043 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5510 d7237540a83e7c4d6bc24319733a8513 502 Pfam PF06745 KaiC 10 236 5.2E-41 T 14-10-2018 IPR014774 KaiC-like domain Atu5510 d7237540a83e7c4d6bc24319733a8513 502 Pfam PF06745 KaiC 251 470 1.7E-32 T 14-10-2018 IPR014774 KaiC-like domain Atu5510 d7237540a83e7c4d6bc24319733a8513 502 SUPERFAMILY SSF52540 5 241 7.07E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5510 d7237540a83e7c4d6bc24319733a8513 502 PIRSF PIRSF039117 1 496 1.1E-137 T 14-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Atu4894 c40ee827a70021b22521192ed358bf60 500 Pfam PF00665 Integrase core domain 142 270 4.6E-15 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu4894 c40ee827a70021b22521192ed358bf60 500 SUPERFAMILY SSF53098 170 311 6.83E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu1570 85d7cf4c254d27a829ec4c30d722c767 105 Pfam PF11324 Protein of unknown function (DUF3126) 43 104 1.7E-29 T 14-10-2018 IPR021473 Protein of unknown function DUF3126 Atu2407 7f9439784d483280b6b56017c60afc08 100 Pfam PF00547 Urease, gamma subunit 1 99 1.2E-46 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2407 7f9439784d483280b6b56017c60afc08 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.193 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2407 7f9439784d483280b6b56017c60afc08 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-46 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2407 7f9439784d483280b6b56017c60afc08 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 1.7E-48 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2407 7f9439784d483280b6b56017c60afc08 100 Gene3D G3DSA:3.30.280.10 1 100 6.9E-47 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2407 7f9439784d483280b6b56017c60afc08 100 PIRSF PIRSF001223 1 100 1.9E-50 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu2407 7f9439784d483280b6b56017c60afc08 100 SUPERFAMILY SSF54111 1 100 7.98E-45 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Atu0436 def8a8518e56611e58535f1717871109 718 Pfam PF13538 UvrD-like helicase C-terminal domain 580 630 1.2E-12 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain Atu0436 def8a8518e56611e58535f1717871109 718 SUPERFAMILY SSF52540 191 636 2.53E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0436 def8a8518e56611e58535f1717871109 718 Gene3D G3DSA:3.40.50.300 190 391 2.7E-19 T 14-10-2018 Atu0436 def8a8518e56611e58535f1717871109 718 Gene3D G3DSA:3.40.50.300 473 671 3.2E-15 T 14-10-2018 Atu4880 56025166af6781fdf87c8c95a4fca566 305 SUPERFAMILY SSF46689 240 291 4.99E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4880 56025166af6781fdf87c8c95a4fca566 305 Pfam PF12833 Helix-turn-helix domain 211 285 4.9E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4880 56025166af6781fdf87c8c95a4fca566 305 Gene3D G3DSA:1.10.10.60 183 293 1.5E-24 T 14-10-2018 Atu4880 56025166af6781fdf87c8c95a4fca566 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 175 3.7E-47 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Atu4880 56025166af6781fdf87c8c95a4fca566 305 SMART SM00342 204 287 3.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4880 56025166af6781fdf87c8c95a4fca566 305 SUPERFAMILY SSF46689 187 238 2.59E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 Pfam PF01497 Periplasmic binding protein 31 265 2.9E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 79 94 2.3E-9 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 178 193 2.3E-9 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 202 220 2.3E-9 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 48 66 2.3E-9 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 267 280 2.3E-9 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 SUPERFAMILY SSF53807 30 286 3.92E-50 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 Gene3D G3DSA:3.40.50.1980 25 114 7.9E-18 T 14-10-2018 Atu4023 f7f861507b5c619957ebdc7d8aacbda4 293 Gene3D G3DSA:3.40.50.1980 117 290 5.9E-49 T 14-10-2018 Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 Gene3D G3DSA:3.10.20.30 1 74 3.1E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 SUPERFAMILY SSF54292 2 85 1.44E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 Gene3D G3DSA:1.10.150.120 75 167 1.8E-31 T 14-10-2018 Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 Pfam PF01799 [2Fe-2S] binding domain 71 159 4.2E-29 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 3 52 4.1E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atu5498 9c34bad0ab700c3118f294d8cffc6e22 177 SUPERFAMILY SSF47741 82 163 8.37E-26 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Atu3559 b0b1ebcf516799d123c5f146c4fd86f9 364 SUPERFAMILY SSF53756 11 361 1.1E-62 T 14-10-2018 Atu3559 b0b1ebcf516799d123c5f146c4fd86f9 364 Pfam PF13439 Glycosyltransferase Family 4 16 170 3.5E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu3559 b0b1ebcf516799d123c5f146c4fd86f9 364 Gene3D G3DSA:3.40.50.2000 173 344 8.4E-41 T 14-10-2018 Atu3559 b0b1ebcf516799d123c5f146c4fd86f9 364 Pfam PF00534 Glycosyl transferases group 1 191 342 1.4E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu3559 b0b1ebcf516799d123c5f146c4fd86f9 364 Gene3D G3DSA:3.40.50.2000 130 359 8.4E-41 T 14-10-2018 Atu2040 84edb9a18ade211d50ade3b5ef3e1901 296 Gene3D G3DSA:3.40.50.1000 25 286 8.5E-69 T 14-10-2018 IPR023214 HAD superfamily Atu2040 84edb9a18ade211d50ade3b5ef3e1901 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 75 285 5.2E-66 T 14-10-2018 Atu2040 84edb9a18ade211d50ade3b5ef3e1901 296 SUPERFAMILY SSF56784 78 285 2.58E-44 T 14-10-2018 IPR036412 HAD-like superfamily Atu2040 84edb9a18ade211d50ade3b5ef3e1901 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 84 251 1.4E-16 T 14-10-2018 Atu2040 84edb9a18ade211d50ade3b5ef3e1901 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 82 252 5.0E-33 T 14-10-2018 Atu5052 5c0ac4be5449cd13ecbda9aa534f7faa 158 SUPERFAMILY SSF49764 11 137 2.3E-19 T 14-10-2018 IPR008978 HSP20-like chaperone Atu5052 5c0ac4be5449cd13ecbda9aa534f7faa 158 Gene3D G3DSA:2.60.40.790 36 139 1.1E-19 T 14-10-2018 IPR008978 HSP20-like chaperone Atu5052 5c0ac4be5449cd13ecbda9aa534f7faa 158 Pfam PF00011 Hsp20/alpha crystallin family 43 138 1.2E-15 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Atu0601 e6e5e6d126d4303ebe0cd1a5f11a1ab7 428 Gene3D G3DSA:3.50.50.60 34 386 2.0E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0601 e6e5e6d126d4303ebe0cd1a5f11a1ab7 428 SUPERFAMILY SSF51905 11 317 3.11E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0601 e6e5e6d126d4303ebe0cd1a5f11a1ab7 428 Gene3D G3DSA:3.30.9.10 126 347 2.0E-71 T 14-10-2018 Atu0601 e6e5e6d126d4303ebe0cd1a5f11a1ab7 428 Pfam PF01266 FAD dependent oxidoreductase 34 385 1.2E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu1139 94f95353b5a2935b36d9a1557dd74837 156 SUPERFAMILY SSF69917 19 156 3.14E-34 T 14-10-2018 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 Atu1139 94f95353b5a2935b36d9a1557dd74837 156 Gene3D G3DSA:2.40.128.90 19 156 1.4E-35 T 14-10-2018 Atu1139 94f95353b5a2935b36d9a1557dd74837 156 Pfam PF01278 Omptin family 27 155 2.3E-23 T 14-10-2018 IPR000036 Peptidase A26, omptin GO:0004175|GO:0006508|GO:0009279 Atu5386 0f1fbf7f1411902acf710afd9901c7bb 200 Gene3D G3DSA:1.10.357.10 6 184 1.7E-36 T 14-10-2018 Atu5386 0f1fbf7f1411902acf710afd9901c7bb 200 SUPERFAMILY SSF48498 78 183 1.11E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu5386 0f1fbf7f1411902acf710afd9901c7bb 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 1.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu5386 0f1fbf7f1411902acf710afd9901c7bb 200 SUPERFAMILY SSF46689 15 70 1.95E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5170 7dc3fdbee1b1dbf5338c61f5ef644dd1 283 Gene3D G3DSA:2.60.40.2500 153 280 7.3E-38 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Atu5170 7dc3fdbee1b1dbf5338c61f5ef644dd1 283 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 8 256 3.5E-76 T 14-10-2018 IPR014148 P-type conjugative transfer protein VirB9 Atu5170 7dc3fdbee1b1dbf5338c61f5ef644dd1 283 Pfam PF03524 Conjugal transfer protein 31 254 2.3E-59 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 SUPERFAMILY SSF53474 31 350 2.66E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00412 Epoxide hydrolase signature 56 74 2.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00412 Epoxide hydrolase signature 122 135 2.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00412 Epoxide hydrolase signature 136 149 2.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00412 Epoxide hydrolase signature 76 91 2.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00412 Epoxide hydrolase signature 325 347 2.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00412 Epoxide hydrolase signature 287 303 2.7E-34 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 91 1.0E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 Gene3D G3DSA:3.40.50.1820 29 351 6.8E-94 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1814 069b9155399340f24fb1cc3fd5a0bccd 351 Pfam PF00561 alpha/beta hydrolase fold 50 336 6.6E-32 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2579 214babd766eff634c452476707fb82ed 286 SUPERFAMILY SSF56281 17 286 6.47E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2579 214babd766eff634c452476707fb82ed 286 SMART SM00849 40 251 0.0027 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu2579 214babd766eff634c452476707fb82ed 286 Gene3D G3DSA:3.60.15.10 18 286 2.0E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2579 214babd766eff634c452476707fb82ed 286 Pfam PF12706 Beta-lactamase superfamily domain 53 252 2.7E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3106 b37590882d906eac44c80e858087bc68 428 Gene3D G3DSA:3.40.190.10 141 418 2.9E-111 T 14-10-2018 Atu3106 b37590882d906eac44c80e858087bc68 428 Gene3D G3DSA:3.40.190.10 32 370 2.9E-111 T 14-10-2018 Atu3106 b37590882d906eac44c80e858087bc68 428 Pfam PF13416 Bacterial extracellular solute-binding protein 52 349 1.4E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3106 b37590882d906eac44c80e858087bc68 428 SUPERFAMILY SSF53850 28 425 2.64E-49 T 14-10-2018 Atu4652 316525cef308b57cc8a5bf7864e1179d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 273 1.3E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4652 316525cef308b57cc8a5bf7864e1179d 280 SUPERFAMILY SSF161098 14 280 1.59E-69 T 14-10-2018 IPR035906 MetI-like superfamily Atu4652 316525cef308b57cc8a5bf7864e1179d 280 Gene3D G3DSA:1.10.3720.10 6 271 1.2E-65 T 14-10-2018 IPR035906 MetI-like superfamily Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 8.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 8.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 8.8E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 Pfam PF00106 short chain dehydrogenase 12 209 9.8E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 SUPERFAMILY SSF51735 10 237 8.95E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.1E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2668 baa9d627d3ef2f5ffe45bfb96a5c3d01 284 Gene3D G3DSA:3.40.50.720 9 264 8.0E-52 T 14-10-2018 Atu3420 45f5ca0d0928d8eaacd8cd90c16649fa 446 Gene3D G3DSA:3.20.20.30 1 443 1.5E-158 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3420 45f5ca0d0928d8eaacd8cd90c16649fa 446 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 424 8.8E-156 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3420 45f5ca0d0928d8eaacd8cd90c16649fa 446 PIRSF PIRSF000337 1 438 1.3E-137 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3420 45f5ca0d0928d8eaacd8cd90c16649fa 446 Pfam PF00296 Luciferase-like monooxygenase 17 378 5.0E-64 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3420 45f5ca0d0928d8eaacd8cd90c16649fa 446 SUPERFAMILY SSF51679 3 429 1.83E-131 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu0565 c958017053a85774c5fa155aaaf40a12 145 PIRSF PIRSF034217 1 144 2.4E-74 T 14-10-2018 IPR017024 Uncharacterised conserved protein UCP034217 Atu3118 7438eabf138a4cad12bc4dddbd5c951a 273 Gene3D G3DSA:3.20.20.150 1 273 2.2E-67 T 14-10-2018 Atu3118 7438eabf138a4cad12bc4dddbd5c951a 273 Pfam PF01261 Xylose isomerase-like TIM barrel 24 226 1.2E-26 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu3118 7438eabf138a4cad12bc4dddbd5c951a 273 SUPERFAMILY SSF51658 7 265 1.28E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3815 8890017b9c011f4e9ff70686a31099e9 219 SMART SM00895 75 199 7.4E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu3815 8890017b9c011f4e9ff70686a31099e9 219 Pfam PF07729 FCD domain 77 198 5.8E-24 T 14-10-2018 IPR011711 GntR, C-terminal Atu3815 8890017b9c011f4e9ff70686a31099e9 219 SUPERFAMILY SSF46785 1 69 4.41E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3815 8890017b9c011f4e9ff70686a31099e9 219 Gene3D G3DSA:1.20.120.530 70 212 5.2E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3815 8890017b9c011f4e9ff70686a31099e9 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3815 8890017b9c011f4e9ff70686a31099e9 219 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3815 8890017b9c011f4e9ff70686a31099e9 219 SMART SM00345 7 65 1.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3815 8890017b9c011f4e9ff70686a31099e9 219 SUPERFAMILY SSF48008 72 207 9.15E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3815 8890017b9c011f4e9ff70686a31099e9 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 2.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3815 8890017b9c011f4e9ff70686a31099e9 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 2.8E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3815 8890017b9c011f4e9ff70686a31099e9 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 2.8E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu3815 8890017b9c011f4e9ff70686a31099e9 219 Gene3D G3DSA:1.10.10.10 1 67 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5461 6db9a126f2b03e753d936207e93c684c 276 Gene3D G3DSA:1.10.3720.10 1 267 4.2E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu5461 6db9a126f2b03e753d936207e93c684c 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 266 4.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5461 6db9a126f2b03e753d936207e93c684c 276 SUPERFAMILY SSF161098 3 276 1.87E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu2734 ca63c6d684d6c8d21c3521eea6025f6f 367 Gene3D G3DSA:3.50.50.60 5 358 3.7E-140 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2734 ca63c6d684d6c8d21c3521eea6025f6f 367 SUPERFAMILY SSF51905 4 321 2.5E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu2734 ca63c6d684d6c8d21c3521eea6025f6f 367 Pfam PF01266 FAD dependent oxidoreductase 5 363 1.0E-62 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu2734 ca63c6d684d6c8d21c3521eea6025f6f 367 Gene3D G3DSA:3.30.9.10 86 320 3.7E-140 T 14-10-2018 Atu4109 3ea7b007d2cceeea7838c54953704d73 229 Gene3D G3DSA:3.40.50.450 27 206 3.4E-39 T 14-10-2018 Atu4109 3ea7b007d2cceeea7838c54953704d73 229 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 36 179 1.9E-36 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 Atu4109 3ea7b007d2cceeea7838c54953704d73 229 SUPERFAMILY SSF52309 34 189 6.18E-38 T 14-10-2018 Atu1203 5d93fa2aaa2fd15acf696154f0e4ff24 84 Pfam PF00403 Heavy-metal-associated domain 22 79 9.2E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Atu1203 5d93fa2aaa2fd15acf696154f0e4ff24 84 SUPERFAMILY SSF55008 20 81 1.31E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Atu1203 5d93fa2aaa2fd15acf696154f0e4ff24 84 Gene3D G3DSA:3.30.70.100 18 81 3.4E-17 T 14-10-2018 Atu0912 d1f3292200ad575def1f29b74cf7a41a 525 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 185 209 2.3E-7 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0912 d1f3292200ad575def1f29b74cf7a41a 525 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 155 174 2.3E-7 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0912 d1f3292200ad575def1f29b74cf7a41a 525 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 345 364 2.3E-7 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0912 d1f3292200ad575def1f29b74cf7a41a 525 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 257 281 2.3E-7 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0912 d1f3292200ad575def1f29b74cf7a41a 525 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 397 423 2.3E-7 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu0912 d1f3292200ad575def1f29b74cf7a41a 525 Pfam PF00361 Proton-conducting membrane transporter 150 440 6.3E-50 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu2139 0cbe93d0395654c67bb37cb0739ebc6f 462 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu2139 0cbe93d0395654c67bb37cb0739ebc6f 462 Gene3D G3DSA:3.40.605.10 4 453 3.4E-131 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu2139 0cbe93d0395654c67bb37cb0739ebc6f 462 Pfam PF00171 Aldehyde dehydrogenase family 4 454 1.8E-115 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu2139 0cbe93d0395654c67bb37cb0739ebc6f 462 Gene3D G3DSA:3.40.309.10 232 424 3.4E-131 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu2139 0cbe93d0395654c67bb37cb0739ebc6f 462 SUPERFAMILY SSF53720 4 458 7.07E-127 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu0222 a4e12ac4d0b190de85fd095ca2e3c943 268 Pfam PF08666 SAF domain 46 113 2.9E-4 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu0222 a4e12ac4d0b190de85fd095ca2e3c943 268 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 121 225 1.0E-25 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Atu0222 a4e12ac4d0b190de85fd095ca2e3c943 268 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 6 251 7.3E-65 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB Atu0222 a4e12ac4d0b190de85fd095ca2e3c943 268 SMART SM00858 46 114 6.6E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 SMART SM00357 8 74 6.6E-22 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 Gene3D G3DSA:2.40.50.140 6 72 1.6E-23 T 14-10-2018 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 PRINTS PR00050 Cold shock protein signature 9 24 2.8E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 PRINTS PR00050 Cold shock protein signature 45 63 2.8E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 PRINTS PR00050 Cold shock protein signature 30 39 2.8E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 Pfam PF00313 'Cold-shock' DNA-binding domain 8 72 2.6E-22 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 SUPERFAMILY SSF50249 4 72 6.7E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu5513 4e4cc85b53229d9d5ec89c3b62c1e937 74 PIRSF PIRSF002599 2 74 4.1E-20 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Atu5296 a2a00edc01accf884b19b63160986022 302 Gene3D G3DSA:3.40.50.1820 20 296 1.2E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5296 a2a00edc01accf884b19b63160986022 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 7.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5296 a2a00edc01accf884b19b63160986022 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 94 7.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5296 a2a00edc01accf884b19b63160986022 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 241 255 7.4E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5296 a2a00edc01accf884b19b63160986022 302 SUPERFAMILY SSF53474 31 294 4.5E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5296 a2a00edc01accf884b19b63160986022 302 Pfam PF12146 Serine aminopeptidase, S33 55 283 1.1E-19 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu1117 3f83b42666ab9c1dfdd720ff9c8bcb02 160 Pfam PF03928 Haem-degrading 29 154 1.5E-21 T 14-10-2018 IPR005624 Haem-degrading Atu1117 3f83b42666ab9c1dfdd720ff9c8bcb02 160 Gene3D G3DSA:3.30.450.150 14 158 3.4E-34 T 14-10-2018 IPR038084 GlcG-like domain superfamily Atu1117 3f83b42666ab9c1dfdd720ff9c8bcb02 160 SUPERFAMILY SSF143744 22 158 3.79E-29 T 14-10-2018 IPR038084 GlcG-like domain superfamily Atu0301 935d5f45b46cd336ce238c829aff3798 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 1.1E-90 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atu0301 935d5f45b46cd336ce238c829aff3798 372 Gene3D G3DSA:3.70.10.10 139 370 9.7E-119 T 14-10-2018 Atu0301 935d5f45b46cd336ce238c829aff3798 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 4.3E-31 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atu0301 935d5f45b46cd336ce238c829aff3798 372 PIRSF PIRSF000804 1 372 5.5E-120 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atu0301 935d5f45b46cd336ce238c829aff3798 372 SUPERFAMILY SSF55979 1 119 3.35E-26 T 14-10-2018 Atu0301 935d5f45b46cd336ce238c829aff3798 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.2E-32 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atu0301 935d5f45b46cd336ce238c829aff3798 372 Gene3D G3DSA:3.10.150.10 1 248 9.7E-119 T 14-10-2018 Atu0301 935d5f45b46cd336ce238c829aff3798 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 371 6.1E-33 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Atu0301 935d5f45b46cd336ce238c829aff3798 372 SUPERFAMILY SSF55979 128 250 1.86E-26 T 14-10-2018 Atu0301 935d5f45b46cd336ce238c829aff3798 372 SUPERFAMILY SSF55979 251 372 4.52E-37 T 14-10-2018 Atu0301 935d5f45b46cd336ce238c829aff3798 372 SMART SM00480 17 368 3.0E-120 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Atu0884 a7942b5053b8a38f732545cbf1e0f597 236 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 4 230 6.2E-60 T 14-10-2018 IPR012666 Cobalt transporter subunit CbtA, putative Atu0884 a7942b5053b8a38f732545cbf1e0f597 236 TIGRFAM TIGR02458 CbtA: cobalt transporter subunit CbtA (proposed) 3 232 1.9E-100 T 14-10-2018 IPR012666 Cobalt transporter subunit CbtA, putative Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 Gene3D G3DSA:3.90.180.10 1 307 1.5E-109 T 14-10-2018 Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 6 20 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 SUPERFAMILY SSF50129 261 312 3.77E-8 T 14-10-2018 IPR011032 GroES-like superfamily Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1 100 1.3E-16 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 SUPERFAMILY SSF50129 2 138 1.12E-41 T 14-10-2018 IPR011032 GroES-like superfamily Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 Gene3D G3DSA:3.40.50.720 119 255 1.5E-109 T 14-10-2018 Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 Pfam PF00107 Zinc-binding dehydrogenase 142 267 2.0E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu4289 95693ca9bbabea37da0f26a6210cfce5 312 SUPERFAMILY SSF51735 104 277 5.19E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2611 ad93709562ad236c268a6b7d74b5b2bc 242 SMART SM00014 98 211 6.1E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Atu2611 ad93709562ad236c268a6b7d74b5b2bc 242 Gene3D G3DSA:1.20.144.10 32 212 6.5E-19 T 14-10-2018 Atu2611 ad93709562ad236c268a6b7d74b5b2bc 242 SUPERFAMILY SSF48317 7 222 4.58E-40 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Atu2611 ad93709562ad236c268a6b7d74b5b2bc 242 Pfam PF01569 PAP2 superfamily 100 214 5.5E-23 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Atu2628 2ea545e5937d19c07ee5c342f3542eda 315 Pfam PF00589 Phage integrase family 151 300 6.5E-32 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Atu2628 2ea545e5937d19c07ee5c342f3542eda 315 Gene3D G3DSA:1.10.443.10 129 309 2.7E-47 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Atu2628 2ea545e5937d19c07ee5c342f3542eda 315 Gene3D G3DSA:1.10.150.130 17 127 9.4E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Atu2628 2ea545e5937d19c07ee5c342f3542eda 315 SUPERFAMILY SSF56349 22 307 2.38E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Atu2628 2ea545e5937d19c07ee5c342f3542eda 315 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 18 315 51.376 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Atu2628 2ea545e5937d19c07ee5c342f3542eda 315 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 106 1.3E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Atu1743 192ce6fb29e2ad6ae245ab9af611ecbd 205 Pfam PF01613 Flavin reductase like domain 23 163 2.3E-19 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu1743 192ce6fb29e2ad6ae245ab9af611ecbd 205 SMART SM00903 19 173 1.3E-16 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu1743 192ce6fb29e2ad6ae245ab9af611ecbd 205 SUPERFAMILY SSF50475 2 189 1.28E-48 T 14-10-2018 Atu1743 192ce6fb29e2ad6ae245ab9af611ecbd 205 Gene3D G3DSA:2.30.110.10 5 204 2.8E-57 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu3378 b10525115d90e65982dbb27fa0cf550e 272 Gene3D G3DSA:1.10.3720.10 56 270 1.5E-24 T 14-10-2018 IPR035906 MetI-like superfamily Atu3378 b10525115d90e65982dbb27fa0cf550e 272 SUPERFAMILY SSF161098 63 250 1.83E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu3378 b10525115d90e65982dbb27fa0cf550e 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 269 6.2E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3145 1e999eaa371f96c83ce54b04de0ebdaa 105 PIRSF PIRSF029883 6 105 6.2E-29 T 14-10-2018 IPR025499 Pectin degradation protein KdgF Atu3145 1e999eaa371f96c83ce54b04de0ebdaa 105 Pfam PF07883 Cupin domain 32 85 1.3E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu3145 1e999eaa371f96c83ce54b04de0ebdaa 105 SUPERFAMILY SSF51182 8 104 5.4E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3145 1e999eaa371f96c83ce54b04de0ebdaa 105 Gene3D G3DSA:2.60.120.10 3 105 3.0E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu2296 efa993b2e42d389870214fb76a633328 295 Pfam PF00294 pfkB family carbohydrate kinase 13 286 3.2E-51 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu2296 efa993b2e42d389870214fb76a633328 295 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 242 255 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atu2296 efa993b2e42d389870214fb76a633328 295 SUPERFAMILY SSF53613 8 286 5.77E-66 T 14-10-2018 IPR029056 Ribokinase-like Atu2296 efa993b2e42d389870214fb76a633328 295 Gene3D G3DSA:3.40.1190.20 1 290 1.2E-68 T 14-10-2018 IPR029056 Ribokinase-like Atu1306 d0251f6151c648221c98ff3c76f6dc6a 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 10 201 6.4E-57 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atu1306 d0251f6151c648221c98ff3c76f6dc6a 202 SMART SM01207 16 191 7.0E-89 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atu1306 d0251f6151c648221c98ff3c76f6dc6a 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 17 190 5.5E-53 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atu1306 d0251f6151c648221c98ff3c76f6dc6a 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 13 199 21.022 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Atu1391 8c8627cc7483c1aebec649ea85122198 244 SUPERFAMILY SSF52540 3 237 1.24E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1391 8c8627cc7483c1aebec649ea85122198 244 SMART SM00382 28 223 6.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1391 8c8627cc7483c1aebec649ea85122198 244 Pfam PF00005 ABC transporter 19 167 2.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1391 8c8627cc7483c1aebec649ea85122198 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1391 8c8627cc7483c1aebec649ea85122198 244 Gene3D G3DSA:3.40.50.300 1 241 4.2E-77 T 14-10-2018 Atu1391 8c8627cc7483c1aebec649ea85122198 244 PIRSF PIRSF039085 1 242 1.8E-107 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu4239 4adb3b59f3351c9ba4f8e94863ab6fb3 312 Gene3D G3DSA:2.30.110.10 1 161 1.8E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu4239 4adb3b59f3351c9ba4f8e94863ab6fb3 312 SMART SM00903 15 158 1.2E-54 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu4239 4adb3b59f3351c9ba4f8e94863ab6fb3 312 SUPERFAMILY SSF50475 5 158 5.89E-46 T 14-10-2018 Atu4239 4adb3b59f3351c9ba4f8e94863ab6fb3 312 Gene3D G3DSA:3.90.79.10 162 291 1.5E-33 T 14-10-2018 Atu4239 4adb3b59f3351c9ba4f8e94863ab6fb3 312 Pfam PF01613 Flavin reductase like domain 16 157 7.3E-32 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu1969 7e4fb72261c355319759552e6aebfa85 122 Gene3D G3DSA:2.40.128.200 35 119 3.0E-23 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Atu1969 7e4fb72261c355319759552e6aebfa85 122 SUPERFAMILY SSF141488 41 117 2.09E-21 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Atu1969 7e4fb72261c355319759552e6aebfa85 122 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 43 108 8.3E-16 T 14-10-2018 IPR018660 C-type lysozyme inhibitor Atu0786 a7149f314a25dec62c13ff20553b4768 432 Pfam PF05193 Peptidase M16 inactive domain 167 339 4.9E-34 T 14-10-2018 IPR007863 Peptidase M16, C-terminal Atu0786 a7149f314a25dec62c13ff20553b4768 432 Pfam PF00675 Insulinase (Peptidase family M16) 14 160 1.2E-45 T 14-10-2018 IPR011765 Peptidase M16, N-terminal Atu0786 a7149f314a25dec62c13ff20553b4768 432 SUPERFAMILY SSF63411 221 413 5.58E-45 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Atu0786 a7149f314a25dec62c13ff20553b4768 432 Gene3D G3DSA:3.30.830.10 4 217 1.9E-70 T 14-10-2018 Atu0786 a7149f314a25dec62c13ff20553b4768 432 Gene3D G3DSA:3.30.830.10 221 416 1.6E-54 T 14-10-2018 Atu0786 a7149f314a25dec62c13ff20553b4768 432 SUPERFAMILY SSF63411 3 217 6.98E-61 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Atu0786 a7149f314a25dec62c13ff20553b4768 432 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 Pfam PF00005 ABC transporter 380 529 1.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 ProSitePatterns PS00211 ABC transporters family signature. 501 515 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 Gene3D G3DSA:1.20.1560.10 25 353 4.4E-109 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 Gene3D G3DSA:3.40.50.300 357 614 9.8E-95 T 14-10-2018 Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 SMART SM00382 389 575 2.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 SUPERFAMILY SSF52540 354 599 6.89E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 Pfam PF00664 ABC transporter transmembrane region 39 318 1.6E-31 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu1064 9bc4b5b493157ea1d64f41a239a42ac8 628 SUPERFAMILY SSF90123 22 352 8.24E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 ProSitePatterns PS00618 RecF protein signature 2. 317 335 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 359 8.3E-19 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 375 91.92 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 6 363 9.3E-55 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 ProSitePatterns PS00617 RecF protein signature 1. 126 146 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 SMART SM00382 26 369 4.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 Gene3D G3DSA:1.20.1050.90 129 316 3.3E-78 T 14-10-2018 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 Gene3D G3DSA:3.40.50.300 10 352 3.3E-78 T 14-10-2018 Atu0073 07d2d6c507cfd8bfb071ee19c02ed11f 375 SUPERFAMILY SSF52540 7 374 2.38E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0186 0189edf0b4c65e5554ce265dec80da4f 351 Pfam PF03411 Penicillin-insensitive murein endopeptidase 53 296 3.3E-100 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Atu0186 0189edf0b4c65e5554ce265dec80da4f 351 SUPERFAMILY SSF55166 38 299 5.81E-98 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu0186 0189edf0b4c65e5554ce265dec80da4f 351 PIRSF PIRSF018455 1 306 6.4E-141 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Atu0186 0189edf0b4c65e5554ce265dec80da4f 351 Gene3D G3DSA:3.30.1380.10 38 299 1.1E-89 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu1207 b33b7eba38588c021cd3f16208744689 421 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 413 6.2E-38 T 14-10-2018 IPR000160 GGDEF domain Atu1207 b33b7eba38588c021cd3f16208744689 421 SMART SM00267 246 415 3.4E-39 T 14-10-2018 IPR000160 GGDEF domain Atu1207 b33b7eba38588c021cd3f16208744689 421 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 411 4.1E-34 T 14-10-2018 IPR000160 GGDEF domain Atu1207 b33b7eba38588c021cd3f16208744689 421 Gene3D G3DSA:3.30.70.270 243 414 3.7E-42 T 14-10-2018 Atu1207 b33b7eba38588c021cd3f16208744689 421 SUPERFAMILY SSF55073 261 413 1.57E-37 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0712 d2c4d58b6b9e7bbc3e8717f89ce1053a 393 Gene3D G3DSA:1.10.10.2520 260 343 3.3E-22 T 14-10-2018 Atu0712 d2c4d58b6b9e7bbc3e8717f89ce1053a 393 Pfam PF07486 Cell Wall Hydrolase 275 385 1.7E-26 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Atu3104 cf055104994f611e93088f70e71f5258 503 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 290 494 3.0E-35 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Atu3104 cf055104994f611e93088f70e71f5258 503 Gene3D G3DSA:2.60.40.1180 5 499 1.1E-201 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu3104 cf055104994f611e93088f70e71f5258 503 SMART SM00813 290 494 2.5E-86 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Atu3104 cf055104994f611e93088f70e71f5258 503 SUPERFAMILY SSF51011 371 501 1.47E-36 T 14-10-2018 Atu3104 cf055104994f611e93088f70e71f5258 503 Gene3D G3DSA:3.20.20.80 17 383 1.1E-201 T 14-10-2018 Atu3104 cf055104994f611e93088f70e71f5258 503 SUPERFAMILY SSF51445 16 381 2.17E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu5312 3d13f116223544a90d08702ef604a857 326 Gene3D G3DSA:3.40.50.1980 25 160 1.2E-40 T 14-10-2018 Atu5312 3d13f116223544a90d08702ef604a857 326 Pfam PF01497 Periplasmic binding protein 52 288 8.3E-27 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu5312 3d13f116223544a90d08702ef604a857 326 SUPERFAMILY SSF53807 34 305 5.89E-49 T 14-10-2018 Atu5312 3d13f116223544a90d08702ef604a857 326 Gene3D G3DSA:3.40.50.1980 162 323 1.4E-36 T 14-10-2018 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 SUPERFAMILY SSF82679 4 112 5.36E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 Gene3D G3DSA:2.30.30.30 118 176 1.5E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 SMART SM00739 122 149 4.1E-5 T 14-10-2018 IPR005824 KOW Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 Pfam PF00467 KOW motif 126 157 6.4E-6 T 14-10-2018 IPR005824 KOW Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 SUPERFAMILY SSF50104 121 176 4.51E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 25.105 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 SMART SM00738 2 110 5.2E-47 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 Pfam PF02357 Transcription termination factor nusG 4 107 1.2E-25 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 Gene3D G3DSA:3.30.70.940 1 117 9.6E-42 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 3.5E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.5E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 3.5E-19 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atu1961 cd79e432cbe3b1d80b6849ee183ea0b0 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 4.9E-67 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Atu3904 e9d1ba356a4b5485b9bf0479b5a6f26d 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 289 5.5E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3904 e9d1ba356a4b5485b9bf0479b5a6f26d 297 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 85 285 2.0E-94 T 14-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 Atu3904 e9d1ba356a4b5485b9bf0479b5a6f26d 297 SUPERFAMILY SSF161098 102 282 3.53E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu3904 e9d1ba356a4b5485b9bf0479b5a6f26d 297 Gene3D G3DSA:1.10.3720.10 100 291 2.2E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu4486 9215bf5e383161e9174ef94eb2adb16a 209 SUPERFAMILY SSF55469 3 207 2.49E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu4486 9215bf5e383161e9174ef94eb2adb16a 209 Gene3D G3DSA:3.40.109.10 2 207 9.4E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu4486 9215bf5e383161e9174ef94eb2adb16a 209 Pfam PF00881 Nitroreductase family 7 184 6.1E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 Gene3D G3DSA:3.30.470.20 117 296 2.9E-106 T 14-10-2018 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 6 122 2.4E-39 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 296 1.7E-73 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 157.108 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 Gene3D G3DSA:3.40.50.20 11 116 2.9E-106 T 14-10-2018 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 TIGRFAM TIGR01380 glut_syn: glutathione synthase 6 313 9.8E-121 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 SUPERFAMILY SSF52440 6 123 6.62E-39 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 Gene3D G3DSA:3.30.1490.20 139 203 2.9E-106 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Atu0310 5ac02be4c34e38e6290ad984e07ea12d 319 SUPERFAMILY SSF56059 126 313 2.79E-58 T 14-10-2018 Atu3957 5d9782dd1822227306264ecf54f2cb81 292 Gene3D G3DSA:3.40.190.100 117 223 4.4E-70 T 14-10-2018 Atu3957 5d9782dd1822227306264ecf54f2cb81 292 SUPERFAMILY SSF53850 29 286 1.88E-70 T 14-10-2018 Atu3957 5d9782dd1822227306264ecf54f2cb81 292 Gene3D G3DSA:3.40.190.10 37 286 4.4E-70 T 14-10-2018 Atu3957 5d9782dd1822227306264ecf54f2cb81 292 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 276 6.5E-62 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu3215 de3a395c2e5046f1d8ffc5824e65d355 267 SMART SM00382 33 227 5.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3215 de3a395c2e5046f1d8ffc5824e65d355 267 Pfam PF00005 ABC transporter 24 178 2.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3215 de3a395c2e5046f1d8ffc5824e65d355 267 SUPERFAMILY SSF52540 8 250 1.57E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3215 de3a395c2e5046f1d8ffc5824e65d355 267 Gene3D G3DSA:3.40.50.300 5 264 1.1E-74 T 14-10-2018 Atu3215 de3a395c2e5046f1d8ffc5824e65d355 267 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 SUPERFAMILY SSF52540 34 301 5.77E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 SMART SM00382 33 234 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 Gene3D G3DSA:3.40.50.300 1 318 2.4E-93 T 14-10-2018 Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 Pfam PF00005 ABC transporter 25 182 9.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 7.6E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu5256 0ab3983ef69cac0df1b78bd2b6e6d456 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 2.9E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Atu4584 f43b873705ecf0c0d6f78ca9ee310ede 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 5.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4584 f43b873705ecf0c0d6f78ca9ee310ede 189 Gene3D G3DSA:1.10.357.10 1 188 6.7E-41 T 14-10-2018 Atu4584 f43b873705ecf0c0d6f78ca9ee310ede 189 SUPERFAMILY SSF46689 2 73 1.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2613 6c36da4c6c1338281a626b1c9985fce1 347 SUPERFAMILY SSF53383 1 338 2.69E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu2613 6c36da4c6c1338281a626b1c9985fce1 347 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 344 6.9E-183 T 14-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 Atu2613 6c36da4c6c1338281a626b1c9985fce1 347 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 187 196 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Atu2613 6c36da4c6c1338281a626b1c9985fce1 347 Gene3D G3DSA:3.40.640.10 5 240 1.4E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu2613 6c36da4c6c1338281a626b1c9985fce1 347 Gene3D G3DSA:3.90.1150.10 1 330 1.4E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu2613 6c36da4c6c1338281a626b1c9985fce1 347 Pfam PF00155 Aminotransferase class I and II 2 333 2.5E-79 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu1143 dbfc1b5787bfde31a0e6269d08bf0c1f 242 SUPERFAMILY SSF52540 44 208 1.38E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1143 dbfc1b5787bfde31a0e6269d08bf0c1f 242 Gene3D G3DSA:1.10.8.60 162 229 1.2E-8 T 14-10-2018 Atu1143 dbfc1b5787bfde31a0e6269d08bf0c1f 242 Gene3D G3DSA:3.40.50.300 43 158 2.0E-14 T 14-10-2018 Atu4268 78e974a7c3d52640be43ffd28e014a31 209 Pfam PF01810 LysE type translocator 15 206 7.7E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 182 1.2E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 11 181 3.6E-37 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 SUPERFAMILY SSF47928 9 113 4.84E-24 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 19.531 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 Gene3D G3DSA:1.10.520.20 10 105 2.0E-19 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 9.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 9.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 9.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 9.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu2625 10092f8b1622faad2a13f4c99be65fc2 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 9.8E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Atu1029 b8bd55455244210eecd47154f137d31d 129 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 17.072 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu1029 b8bd55455244210eecd47154f137d31d 129 Pfam PF01192 RNA polymerase Rpb6 8 58 2.4E-15 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atu1029 b8bd55455244210eecd47154f137d31d 129 SMART SM01409 8 60 6.8E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atu1029 b8bd55455244210eecd47154f137d31d 129 Gene3D G3DSA:3.90.940.10 1 86 8.9E-24 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atu1029 b8bd55455244210eecd47154f137d31d 129 SUPERFAMILY SSF63562 1 81 7.19E-22 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Atu1029 b8bd55455244210eecd47154f137d31d 129 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 8.8E-18 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Atu2103 1456e2c47b080eb660020b73c873c74d 146 Gene3D G3DSA:2.40.330.20 2 141 1.4E-22 T 14-10-2018 IPR038619 MraZ superfamily Atu2103 1456e2c47b080eb660020b73c873c74d 146 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 12 127 6.0E-12 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Atu2103 1456e2c47b080eb660020b73c873c74d 146 Pfam PF02381 MraZ protein, putative antitoxin-like 83 135 1.7E-6 T 14-10-2018 IPR020603 MraZ domain Atu2103 1456e2c47b080eb660020b73c873c74d 146 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 146 32.015 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Atu2103 1456e2c47b080eb660020b73c873c74d 146 SUPERFAMILY SSF89447 1 136 2.62E-31 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Atu8173 12169e818616505e011fc0d30c2962e2 87 Pfam PF04380 Membrane fusogenic activity 6 80 9.1E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity Atu1020 f55e3ceda898d03b2afa11c53b64c3f6 369 SUPERFAMILY SSF56935 55 369 2.33E-19 T 14-10-2018 Atu1020 f55e3ceda898d03b2afa11c53b64c3f6 369 Pfam PF02530 Porin subfamily 24 356 7.8E-103 T 14-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 Atu4633 a3090c244b4ceacc45acfc8c253c22a2 195 Pfam PF01384 Phosphate transporter family 24 174 7.8E-41 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Atu5441 ef732b21ec1e57dfdae86bf580b9585b 172 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 19 157 6.2E-26 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu5441 ef732b21ec1e57dfdae86bf580b9585b 172 SUPERFAMILY SSF53850 19 158 1.77E-30 T 14-10-2018 Atu5441 ef732b21ec1e57dfdae86bf580b9585b 172 Gene3D G3DSA:3.40.190.10 14 159 4.4E-31 T 14-10-2018 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 SUPERFAMILY SSF46946 150 244 1.05E-26 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 SUPERFAMILY SSF81624 2 157 1.01E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 SMART SM00898 2 134 1.0E-57 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 Pfam PF06827 Zinc finger found in FPG and IleRS 268 298 2.6E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 133 2.0E-32 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 150 245 1.9E-19 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 298 44.03 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 SMART SM01232 150 248 1.9E-39 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 Gene3D G3DSA:3.20.190.10 1 149 5.1E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 Gene3D G3DSA:1.10.8.50 160 298 1.9E-44 T 14-10-2018 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 297 7.2E-77 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 SUPERFAMILY SSF57716 244 298 1.37E-14 T 14-10-2018 Atu0321 ea0cdcfab19ff735943d29b6a19a25b8 298 ProSitePatterns PS01242 Zinc finger FPG-type signature. 271 297 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Atu3116 03fdc3a7a83f4082afd4edd133664469 373 SUPERFAMILY SSF55347 137 334 9.48E-35 T 14-10-2018 Atu3116 03fdc3a7a83f4082afd4edd133664469 373 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 41 125 2.5E-8 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3116 03fdc3a7a83f4082afd4edd133664469 373 Gene3D G3DSA:3.40.50.720 1 131 4.4E-33 T 14-10-2018 Atu3116 03fdc3a7a83f4082afd4edd133664469 373 SUPERFAMILY SSF51735 41 164 1.2E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3116 03fdc3a7a83f4082afd4edd133664469 373 Gene3D G3DSA:3.30.360.10 132 372 7.8E-68 T 14-10-2018 Atu5518 1b1a8993737ec3a407ef4f16c806ff78 502 Gene3D G3DSA:3.50.50.60 77 406 1.6E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5518 1b1a8993737ec3a407ef4f16c806ff78 502 SUPERFAMILY SSF51905 11 245 5.44E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5518 1b1a8993737ec3a407ef4f16c806ff78 502 Pfam PF13454 FAD-NAD(P)-binding 15 167 4.6E-33 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Atu4558 a85f8fcc2e7ef954344d3b2cc403c357 331 SUPERFAMILY SSF161098 102 321 4.19E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu4558 a85f8fcc2e7ef954344d3b2cc403c357 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 329 5.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4558 a85f8fcc2e7ef954344d3b2cc403c357 331 Gene3D G3DSA:1.10.3720.10 77 331 2.5E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu4558 a85f8fcc2e7ef954344d3b2cc403c357 331 SUPERFAMILY SSF160964 32 66 7.32E-6 T 14-10-2018 Atu1748 b74b9ad29b277f479f905e6d1f2a7fa4 148 SUPERFAMILY SSF82649 1 140 3.92E-41 T 14-10-2018 Atu1748 b74b9ad29b277f479f905e6d1f2a7fa4 148 Pfam PF01592 NifU-like N terminal domain 5 80 5.9E-7 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Atu1748 b74b9ad29b277f479f905e6d1f2a7fa4 148 Gene3D G3DSA:3.90.1010.10 1 136 3.9E-27 T 14-10-2018 Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 Gene3D G3DSA:3.40.50.300 7 206 3.5E-76 T 14-10-2018 Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 187 2.0E-60 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 SUPERFAMILY SSF52540 8 216 1.4E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 287 372 7.0E-23 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 SUPERFAMILY SSF90002 286 372 1.23E-25 T 14-10-2018 Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 Gene3D G3DSA:3.30.1220.10 255 372 3.6E-30 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Atu4502 5c4bcb834dfb421da83bb890c388fc71 375 SMART SM00833 279 372 7.8E-15 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Atu2794 5bb5a8770f028b60c22f90990102a9a7 262 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 22 230 1.0E-41 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu2794 5bb5a8770f028b60c22f90990102a9a7 262 Gene3D G3DSA:3.30.950.10 135 262 5.6E-37 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu2794 5bb5a8770f028b60c22f90990102a9a7 262 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 99 132 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu2794 5bb5a8770f028b60c22f90990102a9a7 262 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 20 254 3.2E-81 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Atu2794 5bb5a8770f028b60c22f90990102a9a7 262 SUPERFAMILY SSF53790 19 257 1.83E-63 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu2794 5bb5a8770f028b60c22f90990102a9a7 262 Gene3D G3DSA:3.40.1010.10 19 134 6.8E-35 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu1808 87d6a63d0432604a5d6c584c6cc52465 380 Gene3D G3DSA:3.90.550.10 30 246 4.4E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1808 87d6a63d0432604a5d6c584c6cc52465 380 SUPERFAMILY SSF53448 40 278 4.22E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu1808 87d6a63d0432604a5d6c584c6cc52465 380 Pfam PF13506 Glycosyl transferase family 21 96 268 9.6E-58 T 14-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 Atu4028 43a135c3507c50a14a41a46ac79b4bd0 169 Gene3D G3DSA:1.10.10.10 61 105 2.1E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4028 43a135c3507c50a14a41a46ac79b4bd0 169 Pfam PF02631 RecX family 58 155 1.1E-14 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Atu1208 e3bdc9125dc7b2cba7b933999668a452 205 SUPERFAMILY SSF52218 1 203 1.37E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu1208 e3bdc9125dc7b2cba7b933999668a452 205 Gene3D G3DSA:3.40.50.360 1 204 2.1E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu1208 e3bdc9125dc7b2cba7b933999668a452 205 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 202 30.147 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 Atu1208 e3bdc9125dc7b2cba7b933999668a452 205 Pfam PF02525 Flavodoxin-like fold 3 200 1.0E-44 T 14-10-2018 IPR003680 Flavodoxin-like fold Atu2506 466ffb87f144b1819c8ca86c0dce3746 312 Gene3D G3DSA:1.10.3720.10 65 308 6.6E-74 T 14-10-2018 IPR035906 MetI-like superfamily Atu2506 466ffb87f144b1819c8ca86c0dce3746 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 299 4.7E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2506 466ffb87f144b1819c8ca86c0dce3746 312 SUPERFAMILY SSF161098 69 295 1.31E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu2222 f5665de769907e102cf67eed706d1066 279 Gene3D G3DSA:3.90.550.10 21 277 5.9E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu2222 f5665de769907e102cf67eed706d1066 279 Pfam PF00535 Glycosyl transferase family 2 38 200 1.1E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu2222 f5665de769907e102cf67eed706d1066 279 SUPERFAMILY SSF53448 33 262 2.71E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3811 2d0a59fa041c8bd46f9dc5db1f07c242 214 SUPERFAMILY SSF52499 7 204 4.71E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu3811 2d0a59fa041c8bd46f9dc5db1f07c242 214 Pfam PF00857 Isochorismatase family 16 166 2.1E-22 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu3811 2d0a59fa041c8bd46f9dc5db1f07c242 214 Gene3D G3DSA:3.40.50.850 9 202 5.8E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu4512 634066490e902cc3d3fd2962b35e348b 611 Pfam PF00294 pfkB family carbohydrate kinase 3 292 1.5E-39 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu4512 634066490e902cc3d3fd2962b35e348b 611 SUPERFAMILY SSF53613 3 301 2.03E-66 T 14-10-2018 IPR029056 Ribokinase-like Atu4512 634066490e902cc3d3fd2962b35e348b 611 Gene3D G3DSA:3.20.20.70 324 608 1.1E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu4512 634066490e902cc3d3fd2962b35e348b 611 Gene3D G3DSA:3.40.1190.20 11 283 7.1E-82 T 14-10-2018 IPR029056 Ribokinase-like Atu4512 634066490e902cc3d3fd2962b35e348b 611 Gene3D G3DSA:2.20.150.10 2 80 7.1E-82 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 Atu4512 634066490e902cc3d3fd2962b35e348b 611 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 2 300 7.4E-110 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 Atu4512 634066490e902cc3d3fd2962b35e348b 611 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 296 604 6.4E-124 T 14-10-2018 IPR018659 Protein of unknown function DUF2090 Atu0178 ab42dcb7f38c88a507e7cdfb5e0a1e2d 300 Pfam PF06007 Phosphonate metabolism protein PhnJ 13 284 7.7E-146 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0178 ab42dcb7f38c88a507e7cdfb5e0a1e2d 300 PIRSF PIRSF011468 4 298 7.7E-163 T 14-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu1263 68b268fd29beb03752f3f28f94ec3eef 732 Gene3D G3DSA:2.130.10.10 27 330 3.9E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Atu1263 68b268fd29beb03752f3f28f94ec3eef 732 Pfam PF13449 Esterase-like activity of phytase 447 712 9.4E-50 T 14-10-2018 IPR027372 Phytase-like domain Atu1263 68b268fd29beb03752f3f28f94ec3eef 732 SUPERFAMILY SSF50969 95 408 1.65E-17 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Atu0859 ad3d6ad6b0bd3ea59c58569d4a9c9ef4 116 Gene3D G3DSA:2.40.128.290 39 116 5.8E-43 T 14-10-2018 IPR038646 Atu4866-like superfamily Atu0859 ad3d6ad6b0bd3ea59c58569d4a9c9ef4 116 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 41 114 3.4E-43 T 14-10-2018 IPR020955 Uncharacterised protein family Atu4866 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 Gene3D G3DSA:3.20.20.70 1 455 3.5E-195 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 SUPERFAMILY SSF54631 54 172 4.76E-28 T 14-10-2018 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 1 455 76.727 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 1 424 2.1E-180 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 Pfam PF00571 CBS domain 54 110 3.1E-10 T 14-10-2018 IPR000644 CBS domain Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 Pfam PF00571 CBS domain 119 169 7.5E-6 T 14-10-2018 IPR000644 CBS domain Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 263 275 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 1 442 3.6E-142 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 SMART SM00116 57 112 7.0E-12 T 14-10-2018 IPR000644 CBS domain Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 SMART SM00116 125 174 5.4E-4 T 14-10-2018 IPR000644 CBS domain Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 SUPERFAMILY SSF51412 138 453 2.62E-114 T 14-10-2018 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 SMART SM01240 1 442 4.3E-274 T 14-10-2018 Atu0624 bc578eab3c95129cc09cb3ef564f3033 457 PIRSF PIRSF000130 1 456 1.2E-186 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Atu1178 51e996e1030239dd6a13cb11895726f6 353 PIRSF PIRSF002465 1 339 7.8E-116 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Atu1178 51e996e1030239dd6a13cb11895726f6 353 Gene3D G3DSA:3.40.718.10 1 340 5.1E-113 T 14-10-2018 Atu1178 51e996e1030239dd6a13cb11895726f6 353 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 334 3.3E-89 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Atu1178 51e996e1030239dd6a13cb11895726f6 353 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 144.808 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Atu1178 51e996e1030239dd6a13cb11895726f6 353 SUPERFAMILY SSF53659 2 336 1.03E-99 T 14-10-2018 Atu1178 51e996e1030239dd6a13cb11895726f6 353 Pfam PF02504 Fatty acid synthesis protein 2 325 1.7E-99 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 SUPERFAMILY SSF46955 2 127 2.05E-37 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.1E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 SMART SM00422 2 71 1.0E-28 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 Gene3D G3DSA:1.10.1660.10 1 126 1.9E-36 T 14-10-2018 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu0888 f7b3ff9eb4d9b87bc7f6ffdde0839355 137 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu1461 a31042ef401f3bab5397e3bfa23fc947 269 SUPERFAMILY SSF56219 14 269 2.62E-34 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu1461 a31042ef401f3bab5397e3bfa23fc947 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 17 261 1.7E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Atu1461 a31042ef401f3bab5397e3bfa23fc947 269 Gene3D G3DSA:3.60.10.10 3 269 8.5E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu1107 b8471eaeca73026f5a2fabe8870711a3 362 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 359 2.7E-80 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Atu1107 b8471eaeca73026f5a2fabe8870711a3 362 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 357 1.3E-56 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Atu2712 24dcf30dbce6d44b8807c17ab332b5ff 238 SUPERFAMILY SSF52540 9 236 2.72E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2712 24dcf30dbce6d44b8807c17ab332b5ff 238 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2712 24dcf30dbce6d44b8807c17ab332b5ff 238 Pfam PF00005 ABC transporter 24 164 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2712 24dcf30dbce6d44b8807c17ab332b5ff 238 SMART SM00382 30 213 2.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2712 24dcf30dbce6d44b8807c17ab332b5ff 238 Gene3D G3DSA:3.40.50.300 19 235 6.5E-62 T 14-10-2018 Atu2015 cd1b52f3e1084a5d1eb5861b352519f0 414 Gene3D G3DSA:3.90.1150.10 20 400 2.7E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu2015 cd1b52f3e1084a5d1eb5861b352519f0 414 SUPERFAMILY SSF53383 3 400 7.6E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu2015 cd1b52f3e1084a5d1eb5861b352519f0 414 Gene3D G3DSA:3.40.640.10 68 294 2.7E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu2015 cd1b52f3e1084a5d1eb5861b352519f0 414 Pfam PF00155 Aminotransferase class I and II 63 396 1.9E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu0188 54677fbdc9145c4039f7713a5718bfee 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 1.2E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0188 54677fbdc9145c4039f7713a5718bfee 364 Gene3D G3DSA:1.10.3720.10 120 353 1.4E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu0188 54677fbdc9145c4039f7713a5718bfee 364 SUPERFAMILY SSF161098 127 345 5.23E-14 T 14-10-2018 IPR035906 MetI-like superfamily Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 SUPERFAMILY SSF46626 70 176 4.8E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 Pfam PF00034 Cytochrome c 73 174 7.7E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 PRINTS PR00604 Class IA and IB cytochrome C signature 148 158 4.3E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 PRINTS PR00604 Class IA and IB cytochrome C signature 95 110 4.3E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 PRINTS PR00604 Class IA and IB cytochrome C signature 82 89 4.3E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 PRINTS PR00604 Class IA and IB cytochrome C signature 129 145 4.3E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 PRINTS PR00604 Class IA and IB cytochrome C signature 165 173 4.3E-14 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0101 a46dfce5dd7c4d1f5a0e50b96a6599dd 192 Gene3D G3DSA:1.10.760.10 32 173 3.9E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu3982 e8c97d363321d756a319cf6859af7d49 660 SUPERFAMILY SSF51338 32 577 9.72E-26 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3982 e8c97d363321d756a319cf6859af7d49 660 Pfam PF07969 Amidohydrolase family 85 569 9.1E-118 T 14-10-2018 IPR013108 Amidohydrolase 3 Atu3982 e8c97d363321d756a319cf6859af7d49 660 Gene3D G3DSA:3.10.310.70 116 226 7.5E-89 T 14-10-2018 Atu3982 e8c97d363321d756a319cf6859af7d49 660 Gene3D G3DSA:3.20.20.140 97 528 7.5E-89 T 14-10-2018 Atu3982 e8c97d363321d756a319cf6859af7d49 660 Gene3D G3DSA:2.30.40.10 44 544 7.5E-89 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu3982 e8c97d363321d756a319cf6859af7d49 660 SUPERFAMILY SSF51556 96 529 7.88E-42 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu1340 f3ff7a140b281afe26d4d74250e996f0 419 Gene3D G3DSA:3.40.630.40 188 416 3.0E-68 T 14-10-2018 Atu1340 f3ff7a140b281afe26d4d74250e996f0 419 Gene3D G3DSA:2.60.40.3500 40 152 1.1E-16 T 14-10-2018 Atu1340 f3ff7a140b281afe26d4d74250e996f0 419 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 193 407 1.2E-43 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Atu1340 f3ff7a140b281afe26d4d74250e996f0 419 SMART SM00646 254 408 1.3E-40 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Atu1340 f3ff7a140b281afe26d4d74250e996f0 419 SUPERFAMILY SSF53187 191 410 1.16E-48 T 14-10-2018 Atu1340 f3ff7a140b281afe26d4d74250e996f0 419 Pfam PF11741 AMIN domain 53 142 3.7E-10 T 14-10-2018 IPR021731 AMIN domain Atu4663 1b9537a187b9adf9bdb446bef329f162 378 SUPERFAMILY SSF161098 169 363 3.27E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu4663 1b9537a187b9adf9bdb446bef329f162 378 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 190 377 1.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4663 1b9537a187b9adf9bdb446bef329f162 378 Gene3D G3DSA:1.10.3720.10 160 376 2.6E-14 T 14-10-2018 IPR035906 MetI-like superfamily Atu4663 1b9537a187b9adf9bdb446bef329f162 378 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 76 3.8E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu2329 662f365142a0b4178cb7de6bb1fbfbf4 235 Pfam PF06299 Protein of unknown function (DUF1045) 61 219 1.2E-56 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu2329 662f365142a0b4178cb7de6bb1fbfbf4 235 PIRSF PIRSF033328 1 235 2.3E-127 T 14-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu4343 f4ba09e34c6206aebe81383b098a0aac 351 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 15 339 5.2E-55 T 14-10-2018 IPR017740 Type VI secretion system-associated, ImpA Atu4343 f4ba09e34c6206aebe81383b098a0aac 351 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 133 2.7E-22 T 14-10-2018 IPR010657 ImpA, N-terminal Atu1000 0c49a514be938917a595668725da00a3 361 Gene3D G3DSA:1.20.1250.20 173 359 1.6E-13 T 14-10-2018 Atu1000 0c49a514be938917a595668725da00a3 361 Pfam PF07690 Major Facilitator Superfamily 3 299 1.2E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1000 0c49a514be938917a595668725da00a3 361 SUPERFAMILY SSF103473 3 353 5.89E-52 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1000 0c49a514be938917a595668725da00a3 361 Gene3D G3DSA:1.20.1250.20 1 167 3.5E-27 T 14-10-2018 Atu4588 05ea39f0b6802a749d40a833c6b32bfb 207 Pfam PF01758 Sodium Bile acid symporter family 43 207 6.5E-42 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Atu4588 05ea39f0b6802a749d40a833c6b32bfb 207 Gene3D G3DSA:1.20.1530.20 1 207 6.2E-73 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu3386 4510a61935153ee344290d0da044963a 331 Pfam PF16220 Domain of unknown function (DUF4880) 17 58 4.6E-13 T 14-10-2018 IPR032623 FecR, N-terminal Atu3386 4510a61935153ee344290d0da044963a 331 Gene3D G3DSA:2.60.120.1440 117 253 3.2E-30 T 14-10-2018 Atu3386 4510a61935153ee344290d0da044963a 331 Pfam PF04773 FecR protein 125 217 6.9E-24 T 14-10-2018 IPR006860 FecR protein Atu3386 4510a61935153ee344290d0da044963a 331 PIRSF PIRSF018266 10 331 4.2E-87 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 SMART SM00346 26 115 3.6E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 Pfam PF01614 Bacterial transcriptional regulator 147 266 4.4E-22 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 SUPERFAMILY SSF55781 96 270 1.05E-39 T 14-10-2018 Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 Gene3D G3DSA:3.30.450.40 99 275 1.7E-63 T 14-10-2018 IPR029016 GAF-like domain superfamily Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 Gene3D G3DSA:1.10.10.10 20 98 7.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 Pfam PF09339 IclR helix-turn-helix domain 28 77 3.6E-12 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Atu5136 ef4f5e7623971169e28a0b0d3e8461fe 275 SUPERFAMILY SSF46785 26 98 1.94E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2257 b1bdcbeef58c0bdfd9a3acdd712f9a34 694 Gene3D G3DSA:3.40.50.880 327 515 1.6E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2257 b1bdcbeef58c0bdfd9a3acdd712f9a34 694 SUPERFAMILY SSF52317 263 516 4.81E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0667 2abc17716a44bd09e4459287b648066b 433 Pfam PF02754 Cysteine-rich domain 321 404 6.3E-14 T 14-10-2018 IPR004017 Cysteine-rich domain Atu0667 2abc17716a44bd09e4459287b648066b 433 Pfam PF02754 Cysteine-rich domain 189 276 8.7E-14 T 14-10-2018 IPR004017 Cysteine-rich domain Atu0667 2abc17716a44bd09e4459287b648066b 433 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu0667 2abc17716a44bd09e4459287b648066b 433 PIRSF PIRSF000139 5 429 5.0E-143 T 14-10-2018 Atu0667 2abc17716a44bd09e4459287b648066b 433 Gene3D G3DSA:1.10.1060.10 2 112 1.5E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Atu0667 2abc17716a44bd09e4459287b648066b 433 SUPERFAMILY SSF54862 22 116 2.09E-20 T 14-10-2018 Atu0667 2abc17716a44bd09e4459287b648066b 433 Pfam PF12838 4Fe-4S dicluster domain 24 90 2.0E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu4606 a9b9433ae329fb9232a69fb8e4ccb0e1 536 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 437 465 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu4606 a9b9433ae329fb9232a69fb8e4ccb0e1 536 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 429 463 1.9E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Atu4606 a9b9433ae329fb9232a69fb8e4ccb0e1 536 Pfam PF05045 Rhamnan synthesis protein F 34 270 5.0E-65 T 14-10-2018 IPR007739 Rhamnan synthesis F Atu4606 a9b9433ae329fb9232a69fb8e4ccb0e1 536 Gene3D G3DSA:2.160.10.10 336 520 7.5E-48 T 14-10-2018 Atu4606 a9b9433ae329fb9232a69fb8e4ccb0e1 536 SUPERFAMILY SSF51161 357 506 4.57E-38 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu8037 e5f72403f5f6ec429ac6b4a16403134f 129 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 125 2.1E-41 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid Atu8037 e5f72403f5f6ec429ac6b4a16403134f 129 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 109 1.1E-24 T 14-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid Atu0668 de2a5fce25bde0210c77a5c055f7ca55 219 Pfam PF13505 Outer membrane protein beta-barrel domain 7 219 1.2E-18 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel Atu0668 de2a5fce25bde0210c77a5c055f7ca55 219 SUPERFAMILY SSF56925 21 219 1.07E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu0668 de2a5fce25bde0210c77a5c055f7ca55 219 Gene3D G3DSA:2.40.160.20 20 219 4.5E-16 T 14-10-2018 Atu5239 02f002c77724c87f76545f351db6a0ff 369 SUPERFAMILY SSF53822 100 353 8.98E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5239 02f002c77724c87f76545f351db6a0ff 369 Gene3D G3DSA:3.40.50.2300 201 329 1.6E-50 T 14-10-2018 Atu5239 02f002c77724c87f76545f351db6a0ff 369 Gene3D G3DSA:1.10.260.40 38 101 1.7E-19 T 14-10-2018 Atu5239 02f002c77724c87f76545f351db6a0ff 369 SMART SM00354 43 113 1.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5239 02f002c77724c87f76545f351db6a0ff 369 SUPERFAMILY SSF47413 44 102 1.88E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu5239 02f002c77724c87f76545f351db6a0ff 369 Pfam PF13377 Periplasmic binding protein-like domain 211 369 5.3E-25 T 14-10-2018 Atu5239 02f002c77724c87f76545f351db6a0ff 369 Pfam PF00356 Bacterial regulatory proteins, lacI family 46 90 8.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu5239 02f002c77724c87f76545f351db6a0ff 369 Gene3D G3DSA:3.40.50.2300 115 345 1.6E-50 T 14-10-2018 Atu6100 65f66a3afa53f1bd2f863a549c44b3f9 133 Pfam PF11284 Protein of unknown function (DUF3085) 41 127 1.8E-34 T 14-10-2018 IPR021436 Protein of unknown function DUF3085 Atu5126 234c8c89c79a99642aa11edc5400f44b 370 Pfam PF00005 ABC transporter 23 163 6.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5126 234c8c89c79a99642aa11edc5400f44b 370 SMART SM00382 30 213 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5126 234c8c89c79a99642aa11edc5400f44b 370 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5126 234c8c89c79a99642aa11edc5400f44b 370 Gene3D G3DSA:2.40.50.100 240 367 1.6E-5 T 14-10-2018 Atu5126 234c8c89c79a99642aa11edc5400f44b 370 SUPERFAMILY SSF52540 6 242 4.18E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5126 234c8c89c79a99642aa11edc5400f44b 370 Gene3D G3DSA:3.40.50.300 3 239 7.5E-73 T 14-10-2018 Atu5126 234c8c89c79a99642aa11edc5400f44b 370 SUPERFAMILY SSF50331 238 366 8.75E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5126 234c8c89c79a99642aa11edc5400f44b 370 Pfam PF08402 TOBE domain 284 362 8.0E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Atu5126 234c8c89c79a99642aa11edc5400f44b 370 Gene3D G3DSA:2.40.50.140 287 355 1.6E-5 T 14-10-2018 Atu0661 5fcdb93ad5639ebcc84bd5fb40e4fd6a 445 Pfam PF13439 Glycosyltransferase Family 4 34 221 5.8E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu0661 5fcdb93ad5639ebcc84bd5fb40e4fd6a 445 Gene3D G3DSA:3.40.50.2000 8 227 2.1E-61 T 14-10-2018 Atu0661 5fcdb93ad5639ebcc84bd5fb40e4fd6a 445 SUPERFAMILY SSF53756 13 423 5.71E-79 T 14-10-2018 Atu0661 5fcdb93ad5639ebcc84bd5fb40e4fd6a 445 Gene3D G3DSA:3.40.50.2000 228 425 6.9E-42 T 14-10-2018 Atu0661 5fcdb93ad5639ebcc84bd5fb40e4fd6a 445 Pfam PF00534 Glycosyl transferases group 1 240 385 2.2E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 PRINTS PR00412 Epoxide hydrolase signature 29 47 9.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 PRINTS PR00412 Epoxide hydrolase signature 219 235 9.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 PRINTS PR00412 Epoxide hydrolase signature 49 64 9.1E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 Gene3D G3DSA:3.40.50.1820 1 277 8.9E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3493 a5b9d9975052a4c473f846c6809f4622 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu3493 a5b9d9975052a4c473f846c6809f4622 278 SUPERFAMILY SSF53474 1 277 2.18E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3493 a5b9d9975052a4c473f846c6809f4622 278 Pfam PF00561 alpha/beta hydrolase fold 24 258 1.4E-23 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2350 7eb5380e02bef18b684aac07c86599af 304 SUPERFAMILY SSF53850 87 301 1.26E-34 T 14-10-2018 Atu2350 7eb5380e02bef18b684aac07c86599af 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 5.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2350 7eb5380e02bef18b684aac07c86599af 304 Pfam PF03466 LysR substrate binding domain 86 297 5.7E-29 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2350 7eb5380e02bef18b684aac07c86599af 304 Gene3D G3DSA:3.40.190.10 91 287 2.0E-33 T 14-10-2018 Atu2350 7eb5380e02bef18b684aac07c86599af 304 SUPERFAMILY SSF46785 2 109 1.79E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2350 7eb5380e02bef18b684aac07c86599af 304 Gene3D G3DSA:1.10.10.10 1 86 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2350 7eb5380e02bef18b684aac07c86599af 304 Gene3D G3DSA:3.40.190.10 164 270 2.0E-33 T 14-10-2018 Atu3388 afd9bc0583024d248bf0f02e52d8d2e7 250 SMART SM00382 29 241 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3388 afd9bc0583024d248bf0f02e52d8d2e7 250 SUPERFAMILY SSF52540 3 220 2.61E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3388 afd9bc0583024d248bf0f02e52d8d2e7 250 Pfam PF00005 ABC transporter 26 159 2.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3388 afd9bc0583024d248bf0f02e52d8d2e7 250 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3388 afd9bc0583024d248bf0f02e52d8d2e7 250 Gene3D G3DSA:3.40.50.300 3 247 2.5E-48 T 14-10-2018 Atu3792 dbe04178f25fe8a17da68513fe267a08 485 ProSitePatterns PS00218 Amino acid permeases signature. 54 84 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 Atu3792 dbe04178f25fe8a17da68513fe267a08 485 PIRSF PIRSF006060 11 481 2.4E-63 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Atu3792 dbe04178f25fe8a17da68513fe267a08 485 Pfam PF00324 Amino acid permease 30 464 4.9E-100 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Atu3792 dbe04178f25fe8a17da68513fe267a08 485 Gene3D G3DSA:1.20.1740.10 21 478 1.2E-60 T 14-10-2018 Atu5069 98ac15cd16a62e4e5a78c0f8b358c7a8 315 Gene3D G3DSA:1.10.3720.10 93 300 3.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu5069 98ac15cd16a62e4e5a78c0f8b358c7a8 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 301 8.9E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5069 98ac15cd16a62e4e5a78c0f8b358c7a8 315 SUPERFAMILY SSF161098 96 288 2.35E-29 T 14-10-2018 IPR035906 MetI-like superfamily Atu2475 3e5e76e060890711d9b80e08d3046559 322 Pfam PF01032 FecCD transport family 30 318 1.1E-48 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu2475 3e5e76e060890711d9b80e08d3046559 322 Gene3D G3DSA:1.10.3470.10 9 322 2.8E-49 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu2475 3e5e76e060890711d9b80e08d3046559 322 SUPERFAMILY SSF81345 6 318 3.4E-54 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4276 ddc042efabef1950fa0d6d990b89cfd7 331 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 321 2.2E-85 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Atu4276 ddc042efabef1950fa0d6d990b89cfd7 331 SMART SM00797 23 312 9.4E-121 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Atu4276 ddc042efabef1950fa0d6d990b89cfd7 331 Gene3D G3DSA:2.40.100.10 187 323 1.6E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu4276 ddc042efabef1950fa0d6d990b89cfd7 331 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 295 6.2E-77 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Atu4276 ddc042efabef1950fa0d6d990b89cfd7 331 SUPERFAMILY SSF50891 199 302 3.49E-6 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu2005 bc6bda5ea6a97f727a04e33363230e05 202 PIRSF PIRSF010521 4 202 3.9E-72 T 14-10-2018 IPR010321 Protein of unknown function DUF922 Atu2005 bc6bda5ea6a97f727a04e33363230e05 202 Pfam PF06037 Bacterial protein of unknown function (DUF922) 37 195 1.1E-46 T 14-10-2018 IPR010321 Protein of unknown function DUF922 Atu1816 c5882a45eee8644fb09aac9d87b6ae10 239 SUPERFAMILY SSF52540 6 232 3.51E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1816 c5882a45eee8644fb09aac9d87b6ae10 239 Pfam PF00005 ABC transporter 26 174 2.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1816 c5882a45eee8644fb09aac9d87b6ae10 239 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1816 c5882a45eee8644fb09aac9d87b6ae10 239 SMART SM00382 35 223 1.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1816 c5882a45eee8644fb09aac9d87b6ae10 239 Gene3D G3DSA:3.40.50.300 5 237 3.2E-63 T 14-10-2018 Atu2396 dc081e90ff4da200f5e9e89543256209 203 Gene3D G3DSA:3.40.50.300 8 201 1.9E-48 T 14-10-2018 Atu2396 dc081e90ff4da200f5e9e89543256209 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 203 45.311 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Atu2396 dc081e90ff4da200f5e9e89543256209 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 180 1.7E-35 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Atu2396 dc081e90ff4da200f5e9e89543256209 203 SUPERFAMILY SSF52540 4 199 5.4E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2396 dc081e90ff4da200f5e9e89543256209 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 199 3.3E-99 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Atu2396 dc081e90ff4da200f5e9e89543256209 203 PIRSF PIRSF005624 2 202 5.5E-49 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Atu4790 b116b7773b34ed3427ef1d848be65fd3 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 240 2.9E-67 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu4790 b116b7773b34ed3427ef1d848be65fd3 322 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 7 308 47.251 T 14-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 Atu4790 b116b7773b34ed3427ef1d848be65fd3 322 SUPERFAMILY SSF51735 3 309 3.08E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4790 b116b7773b34ed3427ef1d848be65fd3 322 Gene3D G3DSA:3.40.50.720 10 297 1.7E-97 T 14-10-2018 Atu4790 b116b7773b34ed3427ef1d848be65fd3 322 Gene3D G3DSA:3.90.25.10 171 306 1.7E-97 T 14-10-2018 Atu2252 2d77d05e8fdc6432dd83b45e469a8e96 209 Pfam PF06938 Protein of unknown function (DUF1285) 49 196 1.4E-54 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 Atu2252 2d77d05e8fdc6432dd83b45e469a8e96 209 PIRSF PIRSF029557 1 208 1.6E-103 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 Atu2252 2d77d05e8fdc6432dd83b45e469a8e96 209 Gene3D G3DSA:3.10.540.10 7 100 7.6E-32 T 14-10-2018 Atu2252 2d77d05e8fdc6432dd83b45e469a8e96 209 Gene3D G3DSA:2.30.270.10 101 172 2.5E-25 T 14-10-2018 IPR023361 DUF1285, beta-roll domain superfamily Atu1085 7f966be9b7b0a5f7fe437005395da494 151 Gene3D G3DSA:1.10.10.10 1 146 1.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1085 7f966be9b7b0a5f7fe437005395da494 151 SUPERFAMILY SSF46785 8 144 4.97E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1085 7f966be9b7b0a5f7fe437005395da494 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.2E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1085 7f966be9b7b0a5f7fe437005395da494 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 5.2E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1085 7f966be9b7b0a5f7fe437005395da494 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 5.2E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1085 7f966be9b7b0a5f7fe437005395da494 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.2E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1085 7f966be9b7b0a5f7fe437005395da494 151 Pfam PF12802 MarR family 32 91 8.3E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1085 7f966be9b7b0a5f7fe437005395da494 151 SMART SM00347 27 127 3.1E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0775 a088846f7904d82f9e3dc7736ec93ff0 322 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 307 1.1E-122 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Atu0775 a088846f7904d82f9e3dc7736ec93ff0 322 Pfam PF01636 Phosphotransferase enzyme family 28 257 3.8E-36 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Atu0775 a088846f7904d82f9e3dc7736ec93ff0 322 Gene3D G3DSA:3.30.200.20 1 104 3.3E-40 T 14-10-2018 Atu0775 a088846f7904d82f9e3dc7736ec93ff0 322 SUPERFAMILY SSF56112 5 311 2.92E-89 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Atu0775 a088846f7904d82f9e3dc7736ec93ff0 322 Gene3D G3DSA:3.90.1200.10 106 319 9.1E-94 T 14-10-2018 Atu0775 a088846f7904d82f9e3dc7736ec93ff0 322 Hamap MF_00301 Homoserine kinase [thrB]. 1 322 170.942 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Atu2343 83a64c3edfd1557b927d177f36587aee 152 SUPERFAMILY SSF55729 5 144 1.03E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2343 83a64c3edfd1557b927d177f36587aee 152 Pfam PF13673 Acetyltransferase (GNAT) domain 21 124 3.3E-16 T 14-10-2018 IPR000182 GNAT domain Atu2343 83a64c3edfd1557b927d177f36587aee 152 Gene3D G3DSA:3.40.630.30 1 147 1.0E-30 T 14-10-2018 Atu1757 905534bd73bcb587384d4a8e88282617 202 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 35 193 3.5E-71 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Atu1757 905534bd73bcb587384d4a8e88282617 202 Gene3D G3DSA:3.10.620.30 62 198 4.2E-24 T 14-10-2018 Atu3763 1257ed37912efeff106d9ea37b1bc2dc 587 SUPERFAMILY SSF55166 48 171 1.02E-30 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu3763 1257ed37912efeff106d9ea37b1bc2dc 587 Gene3D G3DSA:3.30.1380.10 48 171 1.3E-7 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Atu3763 1257ed37912efeff106d9ea37b1bc2dc 587 Pfam PF05951 Bacterial protein of unknown function (DUF882) 15 166 4.2E-76 T 14-10-2018 IPR010275 Protein of unknown function DUF882 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 8.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 8.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 SUPERFAMILY SSF51182 16 197 1.63E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 Gene3D G3DSA:1.10.10.60 166 224 2.2E-6 T 14-10-2018 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 Gene3D G3DSA:2.60.120.10 11 111 1.7E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 Pfam PF02311 AraC-like ligand binding domain 30 147 4.9E-15 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 SUPERFAMILY SSF46689 233 270 2.82E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 Pfam PF12833 Helix-turn-helix domain 190 267 2.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 SMART SM00342 184 266 7.9E-15 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu3153 b74edb9f7a56f8d851b9bd560d244ed5 284 Gene3D G3DSA:1.10.10.60 229 280 9.1E-8 T 14-10-2018 Atu4384 9b234645baf215bfbbfbcd16820512a2 177 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 7 74 1.1E-20 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 Atu4384 9b234645baf215bfbbfbcd16820512a2 177 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 106 171 1.4E-7 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 Gene3D G3DSA:3.40.50.720 6 240 2.1E-71 T 14-10-2018 Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 Pfam PF00106 short chain dehydrogenase 7 205 6.4E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 SUPERFAMILY SSF51735 6 231 1.66E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.8E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 3.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5156 a68898f5cb43c8c5fde8b1507b408c0c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.6E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2675 24ed31e828248a1dfd39b1241829d45c 126 PIRSF PIRSF031804 1 126 8.3E-52 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 Atu2675 24ed31e828248a1dfd39b1241829d45c 126 Pfam PF06803 Protein of unknown function (DUF1232) 62 97 2.4E-14 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 Atu3766 c5e1c8b14ac88f6677dcfeda1e6cc7fe 211 Pfam PF01063 Amino-transferase class IV 12 206 1.2E-27 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Atu3766 c5e1c8b14ac88f6677dcfeda1e6cc7fe 211 SUPERFAMILY SSF56752 12 206 7.85E-34 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Atu3766 c5e1c8b14ac88f6677dcfeda1e6cc7fe 211 Gene3D G3DSA:3.30.470.10 1 78 5.5E-15 T 14-10-2018 Atu3766 c5e1c8b14ac88f6677dcfeda1e6cc7fe 211 Gene3D G3DSA:3.20.10.10 80 211 9.1E-32 T 14-10-2018 Atu5171 3bc57688fa84b25551287570bc6f14ec 390 Gene3D G3DSA:2.40.128.260 187 355 4.3E-49 T 14-10-2018 Atu5171 3bc57688fa84b25551287570bc6f14ec 390 Pfam PF03743 Bacterial conjugation TrbI-like protein 184 357 4.2E-53 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Atu5171 3bc57688fa84b25551287570bc6f14ec 390 Gene3D G3DSA:1.10.1200.160 306 336 4.3E-49 T 14-10-2018 Atu3037 610206cce537bd727219e0763bfc8d5c 293 SUPERFAMILY SSF161098 89 276 2.75E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu3037 610206cce537bd727219e0763bfc8d5c 293 Gene3D G3DSA:1.10.3720.10 82 290 3.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu3037 610206cce537bd727219e0763bfc8d5c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 290 1.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3037 610206cce537bd727219e0763bfc8d5c 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 70 2.6E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu3132 0a0dfc6202fd8819019715298f4771b6 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 284 3.2E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3132 0a0dfc6202fd8819019715298f4771b6 294 SUPERFAMILY SSF161098 22 294 1.68E-68 T 14-10-2018 IPR035906 MetI-like superfamily Atu3132 0a0dfc6202fd8819019715298f4771b6 294 Gene3D G3DSA:1.10.3720.10 13 285 2.4E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu3492 b6a42fcba3a56c670532633987b8d89e 460 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 12 245 1.0E-18 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu3492 b6a42fcba3a56c670532633987b8d89e 460 Gene3D G3DSA:3.30.420.40 238 460 4.8E-63 T 14-10-2018 Atu3492 b6a42fcba3a56c670532633987b8d89e 460 SUPERFAMILY SSF53067 11 245 3.76E-21 T 14-10-2018 Atu3492 b6a42fcba3a56c670532633987b8d89e 460 SUPERFAMILY SSF53067 12 430 1.36E-10 T 14-10-2018 Atu3492 b6a42fcba3a56c670532633987b8d89e 460 Gene3D G3DSA:3.30.420.40 6 237 2.6E-30 T 14-10-2018 Atu5428 84ea171f4c127cb4c94889bd9755f934 445 Pfam PF01554 MatE 267 400 3.3E-9 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu5428 84ea171f4c127cb4c94889bd9755f934 445 Pfam PF01554 MatE 29 188 3.4E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu5428 84ea171f4c127cb4c94889bd9755f934 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 29 418 3.7E-55 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 Gene3D G3DSA:1.10.10.10 676 746 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 687 701 4.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 717 729 4.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 701 717 4.5E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 SMART SM00421 684 741 9.3E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 ProSitePatterns PS00622 LuxR-type HTH domain signature. 701 728 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 SUPERFAMILY SSF46894 678 746 5.44E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu3035 8ea9fbe202c429d499436ce03c35cdd9 747 Pfam PF00196 Bacterial regulatory proteins, luxR family 687 741 3.0E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0874 f4f7f8e767acfad4fc5d1bcf670dcede 180 Pfam PF13420 Acetyltransferase (GNAT) domain 11 165 6.6E-24 T 14-10-2018 Atu0874 f4f7f8e767acfad4fc5d1bcf670dcede 180 SUPERFAMILY SSF55729 9 171 2.23E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0874 f4f7f8e767acfad4fc5d1bcf670dcede 180 Gene3D G3DSA:3.40.630.30 4 179 6.2E-53 T 14-10-2018 Atu4221 c041bc8f1605608d1f08cb06311c830f 182 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 33 180 2.1E-54 T 14-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4221 c041bc8f1605608d1f08cb06311c830f 182 Gene3D G3DSA:3.30.1360.120 104 181 1.4E-21 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu4221 c041bc8f1605608d1f08cb06311c830f 182 Gene3D G3DSA:3.30.70.1520 59 103 1.4E-21 T 14-10-2018 Atu4221 c041bc8f1605608d1f08cb06311c830f 182 Pfam PF04268 Sarcosine oxidase, gamma subunit family 37 179 1.1E-38 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4221 c041bc8f1605608d1f08cb06311c830f 182 SUPERFAMILY SSF103025 65 180 1.33E-9 T 14-10-2018 Atu2395 f5e99d72846e4453537467975ebe9b3b 274 SMART SM00849 51 253 3.4E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu2395 f5e99d72846e4453537467975ebe9b3b 274 SUPERFAMILY SSF56281 11 260 1.76E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2395 f5e99d72846e4453537467975ebe9b3b 274 Gene3D G3DSA:3.60.15.10 2 273 1.4E-69 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2395 f5e99d72846e4453537467975ebe9b3b 274 Pfam PF00753 Metallo-beta-lactamase superfamily 51 253 4.2E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Gene3D G3DSA:3.30.413.10 119 312 6.0E-78 T 14-10-2018 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 110 3.8E-17 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 396 2.3E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 6.1E-43 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 SUPERFAMILY SSF56014 408 548 3.4E-34 T 14-10-2018 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 SUPERFAMILY SSF56014 120 275 4.58E-48 T 14-10-2018 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 SUPERFAMILY SSF55124 1 126 5.4E-32 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Gene3D G3DSA:3.30.413.10 407 555 1.5E-27 T 14-10-2018 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 SUPERFAMILY SSF55124 252 421 1.19E-23 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 449 527 1.5E-10 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Atu1456 5f60d8c2c933596b81c1cd7c97c4ec9a 556 Gene3D G3DSA:3.90.480.10 52 390 6.0E-78 T 14-10-2018 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 SUPERFAMILY SSF53822 34 395 6.73E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 Gene3D G3DSA:3.40.50.2300 149 381 5.9E-134 T 14-10-2018 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 Pfam PF13433 Periplasmic binding protein domain 34 396 5.8E-143 T 14-10-2018 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 Gene3D G3DSA:3.40.50.2300 36 364 5.9E-134 T 14-10-2018 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 341 356 8.4E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 56 72 8.4E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 75 93 8.4E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 286 299 8.4E-8 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Atu5531 04952747bf13d881ad1b6b5b9d10e572 416 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 26 2.1E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atu5235 096df4140ede014e965bf413dbad1f35 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 1.8E-19 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu5235 096df4140ede014e965bf413dbad1f35 216 SUPERFAMILY SSF161098 12 204 2.09E-35 T 14-10-2018 IPR035906 MetI-like superfamily Atu5235 096df4140ede014e965bf413dbad1f35 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 212 2.1E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5235 096df4140ede014e965bf413dbad1f35 216 Gene3D G3DSA:1.10.3720.10 5 214 3.1E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 7 157 5.6E-44 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 117 151 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 Gene3D G3DSA:3.30.420.10 7 160 2.8E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 87 103 1.3E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 65 81 1.3E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 111 130 1.3E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 142 154 1.3E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 8 21 1.3E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 7 154 1.9E-45 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 SUPERFAMILY SSF53098 6 158 3.29E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu3724 bb0c6f40a4f8907a1487b53f001b195a 170 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 5 157 46.176 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Atu3446 f960a923de54de31e98f1f8e4357f4aa 389 Gene3D G3DSA:3.20.20.30 31 386 8.4E-81 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3446 f960a923de54de31e98f1f8e4357f4aa 389 SUPERFAMILY SSF51679 30 387 2.36E-79 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3446 f960a923de54de31e98f1f8e4357f4aa 389 Pfam PF00296 Luciferase-like monooxygenase 47 358 3.3E-71 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.2E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 Gene3D G3DSA:3.40.190.10 163 262 9.1E-47 T 14-10-2018 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 3.4E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 SUPERFAMILY SSF53850 95 296 1.23E-30 T 14-10-2018 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 Pfam PF03466 LysR substrate binding domain 94 292 4.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 Gene3D G3DSA:1.10.10.10 7 97 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 Gene3D G3DSA:3.40.190.10 103 289 9.1E-47 T 14-10-2018 Atu2312 ea4f0e96cb31e073a1d0fa033d534e42 309 SUPERFAMILY SSF46785 5 89 6.59E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2566 d17059d5f43c3809febe29f26cbd3f91 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 249 2.0E-108 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Atu2566 d17059d5f43c3809febe29f26cbd3f91 257 Gene3D G3DSA:3.20.20.70 1 257 5.7E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2566 d17059d5f43c3809febe29f26cbd3f91 257 SUPERFAMILY SSF110399 1 239 8.37E-78 T 14-10-2018 Atu2566 d17059d5f43c3809febe29f26cbd3f91 257 Hamap MF_00443 Thiazole synthase [thiG]. 1 255 40.076 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Atu1938 6de0fa60d2727768d532bb7407deb7ec 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.5E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1938 6de0fa60d2727768d532bb7407deb7ec 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1938 6de0fa60d2727768d532bb7407deb7ec 66 Gene3D G3DSA:1.10.287.310 1 62 4.7E-29 T 14-10-2018 Atu1938 6de0fa60d2727768d532bb7407deb7ec 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.633 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1938 6de0fa60d2727768d532bb7407deb7ec 66 SUPERFAMILY SSF46561 1 62 3.14E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1938 6de0fa60d2727768d532bb7407deb7ec 66 Pfam PF00831 Ribosomal L29 protein 5 60 4.2E-26 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1299 bde85223d69eb553be0083dc5b482837 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1299 bde85223d69eb553be0083dc5b482837 55 Gene3D G3DSA:2.20.28.120 1 55 7.5E-24 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1299 bde85223d69eb553be0083dc5b482837 55 Pfam PF00471 Ribosomal protein L33 7 53 1.4E-13 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1299 bde85223d69eb553be0083dc5b482837 55 SUPERFAMILY SSF57829 1 53 8.55E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Atu1299 bde85223d69eb553be0083dc5b482837 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 9.3E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1299 bde85223d69eb553be0083dc5b482837 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 11.929 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0401 ccde648fc06aef934b844322dc20078e 308 Gene3D G3DSA:3.40.1190.20 1 306 2.7E-87 T 14-10-2018 IPR029056 Ribokinase-like Atu0401 ccde648fc06aef934b844322dc20078e 308 SUPERFAMILY SSF53613 2 302 1.04E-66 T 14-10-2018 IPR029056 Ribokinase-like Atu0401 ccde648fc06aef934b844322dc20078e 308 Pfam PF00294 pfkB family carbohydrate kinase 2 301 2.5E-44 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu0401 ccde648fc06aef934b844322dc20078e 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atu2311 4133e7ef94248a54eb8ddfe8fc502c3a 290 Gene3D G3DSA:3.40.50.720 123 269 7.5E-28 T 14-10-2018 Atu2311 4133e7ef94248a54eb8ddfe8fc502c3a 290 Pfam PF02625 XdhC and CoxI family 17 74 4.2E-12 T 14-10-2018 IPR003777 XdhC- CoxI Atu2311 4133e7ef94248a54eb8ddfe8fc502c3a 290 Pfam PF13478 XdhC Rossmann domain 124 265 1.6E-28 T 14-10-2018 IPR027051 XdhC Rossmann domain Atu2311 4133e7ef94248a54eb8ddfe8fc502c3a 290 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 23 266 1.1E-97 T 14-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC Atu6131 eeed473151edbd76e86f26613d1a2755 102 Gene3D G3DSA:1.10.287.160 1 102 9.5E-42 T 14-10-2018 Atu6131 eeed473151edbd76e86f26613d1a2755 102 Pfam PF09228 Prokaryotic Transcriptional repressor TraM 1 98 6.0E-35 T 14-10-2018 IPR015309 Transcriptional repressor TraM GO:0045892 Atu6131 eeed473151edbd76e86f26613d1a2755 102 SUPERFAMILY SSF109631 1 99 4.45E-48 T 14-10-2018 IPR036336 Transcriptional repressor TraM superfamily Atu6131 eeed473151edbd76e86f26613d1a2755 102 PIRSF PIRSF017930 1 102 6.0E-56 T 14-10-2018 IPR015309 Transcriptional repressor TraM GO:0045892 Atu3850 ce396d29a6c6b2e920f8f539be26364d 97 Pfam PF12728 Helix-turn-helix domain 5 53 1.4E-10 T 14-10-2018 Atu1199 e3e8ab6cdff32193b136b80288b1ead6 301 SUPERFAMILY SSF161098 94 280 7.19E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu1199 e3e8ab6cdff32193b136b80288b1ead6 301 Gene3D G3DSA:1.10.3720.10 92 293 1.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu1199 e3e8ab6cdff32193b136b80288b1ead6 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 289 3.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1199 e3e8ab6cdff32193b136b80288b1ead6 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 34 76 2.6E-6 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu3663 8fc5d5379b6f927cb8c753ba2ac01c32 140 Gene3D G3DSA:1.10.10.10 1 140 1.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3663 8fc5d5379b6f927cb8c753ba2ac01c32 140 SUPERFAMILY SSF46785 9 132 3.11E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3663 8fc5d5379b6f927cb8c753ba2ac01c32 140 Pfam PF02082 Transcriptional regulator 2 82 8.7E-19 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu1813 8fc5d5379b6f927cb8c753ba2ac01c32 140 Gene3D G3DSA:1.10.10.10 1 140 1.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1813 8fc5d5379b6f927cb8c753ba2ac01c32 140 SUPERFAMILY SSF46785 9 132 3.11E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1813 8fc5d5379b6f927cb8c753ba2ac01c32 140 Pfam PF02082 Transcriptional regulator 2 82 8.7E-19 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu1906 ec777753b66518c520eccf3a5e47bd42 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.8E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atu1906 ec777753b66518c520eccf3a5e47bd42 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.8E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atu1906 ec777753b66518c520eccf3a5e47bd42 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.8E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atu1906 ec777753b66518c520eccf3a5e47bd42 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 21 42 1.8E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atu1906 ec777753b66518c520eccf3a5e47bd42 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.8E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atu1906 ec777753b66518c520eccf3a5e47bd42 253 PIRSF PIRSF006648 10 250 3.4E-32 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Atu1906 ec777753b66518c520eccf3a5e47bd42 253 Pfam PF01061 ABC-2 type transporter 6 216 3.7E-35 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Atu2562 0e1b81d619aefda9311686bb29f165e0 235 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 17 225 1.1E-64 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Atu2562 0e1b81d619aefda9311686bb29f165e0 235 SUPERFAMILY SSF161098 8 223 3.27E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu2562 0e1b81d619aefda9311686bb29f165e0 235 Gene3D G3DSA:1.10.3720.10 3 229 9.9E-58 T 14-10-2018 IPR035906 MetI-like superfamily Atu2562 0e1b81d619aefda9311686bb29f165e0 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 233 9.4E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4253 1346784809c13e7a8f6d13f449ae545f 536 Gene3D G3DSA:3.50.50.60 2 103 1.8E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4253 1346784809c13e7a8f6d13f449ae545f 536 Pfam PF12831 FAD dependent oxidoreductase 7 510 7.3E-99 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Atu4253 1346784809c13e7a8f6d13f449ae545f 536 SUPERFAMILY SSF51905 4 383 3.6E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4422 9c3c3b20c74496a424ff2eb73091f56c 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 269 2.5E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4422 9c3c3b20c74496a424ff2eb73091f56c 275 Gene3D G3DSA:1.10.3720.10 6 274 5.0E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu4422 9c3c3b20c74496a424ff2eb73091f56c 275 SUPERFAMILY SSF161098 9 268 2.24E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu3175 57080dd20326dcb901f180d5dfa98c79 390 PIRSF PIRSF001434 4 388 1.8E-116 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu3175 57080dd20326dcb901f180d5dfa98c79 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 384 6.5E-97 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Atu3175 57080dd20326dcb901f180d5dfa98c79 390 Gene3D G3DSA:3.90.1150.10 259 389 1.5E-27 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3175 57080dd20326dcb901f180d5dfa98c79 390 Gene3D G3DSA:3.40.640.10 11 258 2.7E-76 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3175 57080dd20326dcb901f180d5dfa98c79 390 SUPERFAMILY SSF53383 27 385 1.2E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu8170 942ed7709c1970b13e8c8ab5875edcc9 102 Gene3D G3DSA:1.10.238.120 1 102 2.0E-38 T 14-10-2018 IPR023154 Jann4075-like superfamily Atu8170 942ed7709c1970b13e8c8ab5875edcc9 102 Pfam PF11015 Protein of unknown function (DUF2853) 3 99 1.3E-36 T 14-10-2018 IPR021274 Protein of unknown function DUF2853 Atu8170 942ed7709c1970b13e8c8ab5875edcc9 102 SUPERFAMILY SSF158587 1 101 2.22E-36 T 14-10-2018 IPR023154 Jann4075-like superfamily Atu1907 a69972ba09e62c4140274e1f0dd84e0e 308 Pfam PF00005 ABC transporter 21 163 4.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1907 a69972ba09e62c4140274e1f0dd84e0e 308 SMART SM00382 30 214 4.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1907 a69972ba09e62c4140274e1f0dd84e0e 308 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1907 a69972ba09e62c4140274e1f0dd84e0e 308 Gene3D G3DSA:3.40.50.300 1 239 1.3E-63 T 14-10-2018 Atu1907 a69972ba09e62c4140274e1f0dd84e0e 308 SUPERFAMILY SSF52540 2 227 5.43E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2683 74f86bed1bfa55857df282063812410c 130 Pfam PF10984 Protein of unknown function (DUF2794) 35 119 1.7E-40 T 14-10-2018 IPR021252 Protein of unknown function DUF2794 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 Gene3D G3DSA:2.30.33.40 1 98 1.0E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 Hamap MF_00580 10 kDa chaperonin [groS]. 5 98 27.49 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 PRINTS PR00297 10kDa chaperonin signature 84 97 9.1E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 PRINTS PR00297 10kDa chaperonin signature 28 49 9.1E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 PRINTS PR00297 10kDa chaperonin signature 63 75 9.1E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 PRINTS PR00297 10kDa chaperonin signature 6 21 9.1E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 SUPERFAMILY SSF50129 4 97 3.7E-36 T 14-10-2018 IPR011032 GroES-like superfamily Atu0683 978bc4f501d8c102fb677694841e0ee6 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 97 2.0E-36 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 6 30 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Atu0683 978bc4f501d8c102fb677694841e0ee6 98 SMART SM00883 5 97 4.0E-61 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Atu3948 4e3f93e3965529705d85640ec010312e 381 Gene3D G3DSA:3.20.20.10 19 240 4.0E-121 T 14-10-2018 IPR029066 PLP-binding barrel Atu3948 4e3f93e3965529705d85640ec010312e 381 Pfam PF01168 Alanine racemase, N-terminal domain 17 243 4.7E-31 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Atu3948 4e3f93e3965529705d85640ec010312e 381 SUPERFAMILY SSF51419 17 251 1.7E-31 T 14-10-2018 IPR029066 PLP-binding barrel Atu3948 4e3f93e3965529705d85640ec010312e 381 Pfam PF14031 Putative serine dehydratase domain 258 363 1.5E-20 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Atu3948 4e3f93e3965529705d85640ec010312e 381 SMART SM01119 258 365 1.8E-37 T 14-10-2018 IPR026956 D-serine dehydratase-like domain Atu3948 4e3f93e3965529705d85640ec010312e 381 Gene3D G3DSA:2.40.37.20 11 365 4.0E-121 T 14-10-2018 Atu5358 578fe7ef36083bd6155dc4d4139e4dd3 216 Pfam PF01810 LysE type translocator 20 209 9.9E-29 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu5358 578fe7ef36083bd6155dc4d4139e4dd3 216 PIRSF PIRSF006324 7 213 8.1E-54 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu2686 9ae0c12b1150c716501a6c4eca7d3989 213 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2686 9ae0c12b1150c716501a6c4eca7d3989 213 SUPERFAMILY SSF52540 4 192 8.4E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2686 9ae0c12b1150c716501a6c4eca7d3989 213 Pfam PF00005 ABC transporter 19 161 3.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2686 9ae0c12b1150c716501a6c4eca7d3989 213 Gene3D G3DSA:3.40.50.300 2 201 2.0E-40 T 14-10-2018 Atu2686 9ae0c12b1150c716501a6c4eca7d3989 213 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 203 1.4E-73 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Atu2686 9ae0c12b1150c716501a6c4eca7d3989 213 SMART SM00382 27 207 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2692 a9507a579073a1c72e05e230e227073e 216 Pfam PF04279 Intracellular septation protein A 21 208 1.8E-58 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Atu2692 a9507a579073a1c72e05e230e227073e 216 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 21 207 2.9E-53 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Atu2692 a9507a579073a1c72e05e230e227073e 216 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 21 210 18.409 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Atu2412 22cd82a3ac703ab773fba4f06c93c841 392 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 354 4.2E-134 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC Atu2412 22cd82a3ac703ab773fba4f06c93c841 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 344 1.6E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu4386 70864ece6c033f336c4f79757dfc9d07 632 Gene3D G3DSA:3.40.50.410 439 620 2.6E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atu4386 70864ece6c033f336c4f79757dfc9d07 632 SUPERFAMILY SSF53300 443 630 2.07E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atu4386 70864ece6c033f336c4f79757dfc9d07 632 SMART SM00327 442 631 3.9E-23 T 14-10-2018 IPR002035 von Willebrand factor, type A Atu4386 70864ece6c033f336c4f79757dfc9d07 632 Pfam PF00092 von Willebrand factor type A domain 481 596 1.7E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A Atu4866 fa421aa3c2cd97c08ce3b5516174a286 79 Gene3D G3DSA:2.40.128.290 1 79 5.6E-43 T 14-10-2018 IPR038646 Atu4866-like superfamily Atu4866 fa421aa3c2cd97c08ce3b5516174a286 79 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 2 77 1.2E-38 T 14-10-2018 IPR020955 Uncharacterised protein family Atu4866 Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.7E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 Gene3D G3DSA:3.40.50.720 1 247 4.6E-80 T 14-10-2018 Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 244 1.7E-52 T 14-10-2018 Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 SUPERFAMILY SSF51735 5 246 6.3E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 5 247 3.1E-122 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3141 3ad082dade7b6ffcb4fb1708353a5927 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.9E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2614 c70c584b195574afa4f908f41bf81d4f 83 Pfam PF13488 Glycine zipper 23 62 2.3E-9 T 14-10-2018 IPR039567 Glycine zipper domain Atu0992 d3b051b5eeb2934115f9e0e9d340b1c2 289 SUPERFAMILY SSF103481 47 141 5.62E-9 T 14-10-2018 Atu0992 d3b051b5eeb2934115f9e0e9d340b1c2 289 Pfam PF00892 EamA-like transporter family 151 277 2.0E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0992 d3b051b5eeb2934115f9e0e9d340b1c2 289 Pfam PF00892 EamA-like transporter family 9 140 3.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0992 d3b051b5eeb2934115f9e0e9d340b1c2 289 SUPERFAMILY SSF103481 182 283 1.83E-10 T 14-10-2018 Atu0697 32c6cf088fdb53e239e9deef152a27d0 348 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 4 336 33.603 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Atu0697 32c6cf088fdb53e239e9deef152a27d0 348 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 300 2.0E-53 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Atu0697 32c6cf088fdb53e239e9deef152a27d0 348 SUPERFAMILY SSF52540 45 151 1.51E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0697 32c6cf088fdb53e239e9deef152a27d0 348 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 17 318 3.9E-86 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Atu3922 4c66bc33ecd98bb420acb5cbb3d130ce 425 Pfam PF03428 Replication protein C N-terminal domain 13 185 6.2E-73 T 14-10-2018 IPR005090 Replication protein C Atu3922 4c66bc33ecd98bb420acb5cbb3d130ce 425 SUPERFAMILY SSF46785 91 168 5.22E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3922 4c66bc33ecd98bb420acb5cbb3d130ce 425 Pfam PF11800 Replication protein C C-terminal region 195 415 3.7E-64 T 14-10-2018 IPR021760 Replication protein-C C-terminal Atu3876 dd204be32c532150b7589a4acae846c9 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 31 41 3.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 388 400 3.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 47 59 3.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 30 3.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 92 104 3.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 356 362 3.9E-20 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 Gene3D G3DSA:3.30.9.10 96 363 6.2E-98 T 14-10-2018 Atu3876 dd204be32c532150b7589a4acae846c9 574 Gene3D G3DSA:1.10.8.870 441 568 6.8E-23 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 SUPERFAMILY SSF51905 17 362 1.11E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3876 dd204be32c532150b7589a4acae846c9 574 Pfam PF01266 FAD dependent oxidoreductase 19 398 6.0E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3876 dd204be32c532150b7589a4acae846c9 574 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 422 543 6.2E-22 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Atu3876 dd204be32c532150b7589a4acae846c9 574 Gene3D G3DSA:3.50.50.60 19 407 6.2E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0112 7e044cc6e4a3aeebc574c8f242d92d31 61 SUPERFAMILY SSF57829 1 55 4.09E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Atu0112 7e044cc6e4a3aeebc574c8f242d92d31 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 18.747 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0112 7e044cc6e4a3aeebc574c8f242d92d31 61 Pfam PF01783 Ribosomal L32p protein family 2 56 1.6E-21 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0112 7e044cc6e4a3aeebc574c8f242d92d31 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.4E-23 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1678 c2978d14299a37a2b96fd3e05039cdc8 366 SUPERFAMILY SSF111337 1 362 1.15E-127 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atu1678 c2978d14299a37a2b96fd3e05039cdc8 366 Gene3D G3DSA:2.40.10.240 64 184 6.3E-111 T 14-10-2018 Atu1678 c2978d14299a37a2b96fd3e05039cdc8 366 Gene3D G3DSA:3.40.1780.10 15 361 6.3E-111 T 14-10-2018 Atu1678 c2978d14299a37a2b96fd3e05039cdc8 366 Pfam PF02547 Queuosine biosynthesis protein 4 362 9.6E-126 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atu1678 c2978d14299a37a2b96fd3e05039cdc8 366 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 361 6.2E-114 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atu1678 c2978d14299a37a2b96fd3e05039cdc8 366 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 363 43.679 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Atu2344 9fb9dd92d70c24ff03144cb99c868b6a 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 127 6.4E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu2344 9fb9dd92d70c24ff03144cb99c868b6a 136 Gene3D G3DSA:3.10.180.10 8 136 1.8E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2344 9fb9dd92d70c24ff03144cb99c868b6a 136 SUPERFAMILY SSF54593 6 132 5.77E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 Gene3D G3DSA:1.20.120.530 92 234 2.5E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 Pfam PF07729 FCD domain 99 225 4.9E-22 T 14-10-2018 IPR011711 GntR, C-terminal Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 SUPERFAMILY SSF48008 95 231 4.45E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 SUPERFAMILY SSF46785 7 79 1.62E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 SMART SM00895 99 226 2.4E-21 T 14-10-2018 IPR011711 GntR, C-terminal Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 SMART SM00345 16 75 1.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.8E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3461 31cf6afdd55a68ee9cd0c6e19d6b2994 242 Gene3D G3DSA:1.10.10.10 4 84 5.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0233 e6d9542bef1f2621eba1a73629c2f661 365 SUPERFAMILY SSF51445 158 361 1.37E-67 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu0233 e6d9542bef1f2621eba1a73629c2f661 365 Gene3D G3DSA:3.20.20.80 150 362 5.9E-70 T 14-10-2018 Atu0233 e6d9542bef1f2621eba1a73629c2f661 365 SMART SM00641 160 263 1.4E-17 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup Atu0233 e6d9542bef1f2621eba1a73629c2f661 365 Pfam PF01183 Glycosyl hydrolases family 25 163 340 1.5E-56 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Atu0465 b5419e73c0bdb1e1547f9c26dede7df8 152 SMART SM00530 60 119 5.2E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0465 b5419e73c0bdb1e1547f9c26dede7df8 152 Gene3D G3DSA:1.10.260.40 7 117 6.7E-12 T 14-10-2018 Atu0465 b5419e73c0bdb1e1547f9c26dede7df8 152 Pfam PF13560 Helix-turn-helix domain 58 121 2.8E-8 T 14-10-2018 Atu0465 b5419e73c0bdb1e1547f9c26dede7df8 152 SUPERFAMILY SSF47413 58 108 8.96E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 PRINTS PR00412 Epoxide hydrolase signature 23 41 9.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 PRINTS PR00412 Epoxide hydrolase signature 100 113 9.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 PRINTS PR00412 Epoxide hydrolase signature 251 273 9.4E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 Pfam PF00561 alpha/beta hydrolase fold 18 130 5.4E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 Gene3D G3DSA:3.40.50.1820 1 280 4.6E-83 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 Hamap MF_01231 Haloalkane dehalogenase [dhaA]. 1 277 49.907 T 14-10-2018 IPR023594 Haloalkane dehalogenase, subfamily 2 GO:0018786 KEGG: 00361+3.8.1.5|KEGG: 00625+3.8.1.5 Atu6064 49a915ec05df20f97c50394ae1e9c7df 280 SUPERFAMILY SSF53474 5 276 3.64E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0129 c392add2f678cf21b76187e8fc65175e 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 297 5.8E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 Gene3D G3DSA:3.40.50.2300 139 262 7.5E-29 T 14-10-2018 Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 SUPERFAMILY SSF52172 141 254 2.85E-22 T 14-10-2018 IPR011006 CheY-like superfamily Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 Gene3D G3DSA:1.20.140.160 1 138 3.3E-47 T 14-10-2018 Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 SMART SM00448 140 250 1.9E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 SUPERFAMILY SSF88659 88 132 8.97E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 Pfam PF00072 Response regulator receiver domain 142 246 2.0E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu4162 728e6ad2557b22fe51fd4e072c8e2986 264 PIRSF PIRSF036400 1 264 6.0E-146 T 14-10-2018 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 SMART SM00748 168 288 1.3E-38 T 14-10-2018 IPR007842 HEPN domain Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 Gene3D G3DSA:1.20.120.330 151 308 3.2E-60 T 14-10-2018 Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 SUPERFAMILY SSF81593 168 287 1.14E-9 T 14-10-2018 Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 Pfam PF01909 Nucleotidyltransferase domain 38 85 1.8E-4 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 Pfam PF05168 HEPN domain 169 285 2.7E-9 T 14-10-2018 IPR007842 HEPN domain Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 SUPERFAMILY SSF81301 22 140 6.08E-11 T 14-10-2018 Atu4856 22287a4ced3d3afa577341dc1a5b76c6 308 Gene3D G3DSA:3.30.460.10 12 138 7.2E-14 T 14-10-2018 Atu1326 b2938e5bf556d0b8685aa1b9fd533c3d 157 SUPERFAMILY SSF55729 3 151 7.6E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1326 b2938e5bf556d0b8685aa1b9fd533c3d 157 Pfam PF00583 Acetyltransferase (GNAT) family 44 145 7.3E-14 T 14-10-2018 IPR000182 GNAT domain Atu1326 b2938e5bf556d0b8685aa1b9fd533c3d 157 Gene3D G3DSA:3.40.630.30 4 157 1.4E-34 T 14-10-2018 Atu3156 95e8ee75a66b0922a6d82de54aaf5181 426 PIRSF PIRSF006066 1 426 8.0E-124 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3156 95e8ee75a66b0922a6d82de54aaf5181 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 412 1.7E-103 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu3156 95e8ee75a66b0922a6d82de54aaf5181 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 415 2.2E-112 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 Gene3D G3DSA:1.10.230.10 276 364 1.2E-46 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 SUPERFAMILY SSF46955 19 69 7.32E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 Pfam PF00285 Citrate synthase, C-terminal domain 88 400 5.4E-59 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 PRINTS PR00143 Citrate synthase signature 303 323 3.9E-16 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 PRINTS PR00143 Citrate synthase signature 228 243 3.9E-16 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 PRINTS PR00143 Citrate synthase signature 250 278 3.9E-16 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 SUPERFAMILY SSF48256 58 405 4.06E-73 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 Gene3D G3DSA:1.10.580.10 105 390 1.2E-46 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 Pfam PF13411 MerR HTH family regulatory protein 21 70 4.6E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu5307 7fe8d5f34fe849722bcd6107a0debb6e 406 Gene3D G3DSA:1.10.1660.10 13 77 6.7E-6 T 14-10-2018 Atu0136 e2fa72715dc41df9159e06606f994b42 325 Hamap MF_01962 Adenine deaminase. 1 311 58.224 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Atu0136 e2fa72715dc41df9159e06606f994b42 325 Pfam PF00962 Adenosine/AMP deaminase 7 319 1.0E-58 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Atu0136 e2fa72715dc41df9159e06606f994b42 325 Gene3D G3DSA:3.20.20.140 1 325 4.4E-89 T 14-10-2018 Atu0136 e2fa72715dc41df9159e06606f994b42 325 SUPERFAMILY SSF51556 5 324 3.1E-73 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu0136 e2fa72715dc41df9159e06606f994b42 325 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 5 322 8.2E-95 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Atu4859 1f7395c0f8ae29e7c1766c3fb582ce5f 357 PIRSF PIRSF031854 1 348 7.8E-167 T 14-10-2018 IPR022550 Nucleotidyltransferase 8 Atu4859 1f7395c0f8ae29e7c1766c3fb582ce5f 357 Pfam PF12281 Nucleotidyltransferase 106 318 3.4E-78 T 14-10-2018 IPR022550 Nucleotidyltransferase 8 Atu1619 a0a737598343ccf709758454eeeab0c0 157 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atu1619 a0a737598343ccf709758454eeeab0c0 157 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atu1619 a0a737598343ccf709758454eeeab0c0 157 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 69 1.2E-18 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atu1619 a0a737598343ccf709758454eeeab0c0 157 Pfam PF03840 Preprotein translocase SecG subunit 4 69 5.6E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 531 5.1E-207 T 14-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 SUPERFAMILY SSF53067 4 263 7.87E-59 T 14-10-2018 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 1.8E-30 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 Gene3D G3DSA:3.30.420.460 317 517 1.4E-166 T 14-10-2018 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 276 483 6.9E-48 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 SUPERFAMILY SSF53067 276 527 8.2E-52 T 14-10-2018 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 PIRSF PIRSF000538 2 535 2.3E-74 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu4324 6055540ea33b0e4d833092f323dcbc10 536 Gene3D G3DSA:3.30.420.40 6 507 1.4E-166 T 14-10-2018 Atu2129 5cd8826028f3de86ee3118bbbdfeba18 254 SUPERFAMILY SSF50475 24 253 4.3E-34 T 14-10-2018 Atu2129 5cd8826028f3de86ee3118bbbdfeba18 254 Gene3D G3DSA:2.30.110.10 1 171 3.8E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu2129 5cd8826028f3de86ee3118bbbdfeba18 254 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 25 155 2.5E-10 T 14-10-2018 Atu2129 5cd8826028f3de86ee3118bbbdfeba18 254 Gene3D G3DSA:3.20.180.10 172 254 1.6E-21 T 14-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 4 215 8.1E-86 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 1.0E-60 T 14-10-2018 Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 25 46 1.0E-60 T 14-10-2018 Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 1.0E-60 T 14-10-2018 Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.0E-60 T 14-10-2018 Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 154 173 1.0E-60 T 14-10-2018 Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 1.0E-60 T 14-10-2018 Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 PIRSF PIRSF002764 1 219 1.6E-65 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Atu2687 e6811794bf2e58c5223ad7875c70dc57 219 Pfam PF03379 CcmB protein 1 215 2.2E-82 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Atu5530 dd73a442cb33202e2e7a22511ad031dd 202 Gene3D G3DSA:1.10.10.10 140 194 8.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5530 dd73a442cb33202e2e7a22511ad031dd 202 SUPERFAMILY SSF52172 2 189 6.33E-40 T 14-10-2018 IPR011006 CheY-like superfamily Atu5530 dd73a442cb33202e2e7a22511ad031dd 202 Pfam PF03861 ANTAR domain 148 189 3.8E-12 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Atu5530 dd73a442cb33202e2e7a22511ad031dd 202 SMART SM01012 134 189 2.4E-9 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Atu5530 dd73a442cb33202e2e7a22511ad031dd 202 PIRSF PIRSF036382 1 196 2.5E-55 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Atu5530 dd73a442cb33202e2e7a22511ad031dd 202 Gene3D G3DSA:3.40.50.2300 3 125 2.0E-37 T 14-10-2018 Atu5040 f3af94ec63c823e5452150ea087407f5 300 Gene3D G3DSA:3.90.1530.30 23 91 2.5E-5 T 14-10-2018 Atu5040 f3af94ec63c823e5452150ea087407f5 300 SUPERFAMILY SSF109709 105 185 4.71E-6 T 14-10-2018 Atu5040 f3af94ec63c823e5452150ea087407f5 300 SUPERFAMILY SSF110849 13 103 8.2E-12 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu5040 f3af94ec63c823e5452150ea087407f5 300 Pfam PF02195 ParB-like nuclease domain 33 93 5.0E-6 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu5040 f3af94ec63c823e5452150ea087407f5 300 Pfam PF07506 RepB plasmid partitioning protein 102 283 4.0E-58 T 14-10-2018 IPR011111 RepB plasmid partition Atu5040 f3af94ec63c823e5452150ea087407f5 300 SMART SM00470 14 108 5.9E-4 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 SUPERFAMILY SSF56784 292 571 1.32E-37 T 14-10-2018 IPR036412 HAD-like superfamily Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 304 318 4.9E-22 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 485 4.9E-22 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 547 4.9E-22 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 563 4.9E-22 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 153 167 4.9E-22 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Pfam PF00122 E1-E2 ATPase 103 283 4.7E-33 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Gene3D G3DSA:1.20.1110.10 573 616 1.9E-23 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 ProSitePatterns PS01229 Hypothetical cof family signature 2. 528 550 - T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 306 312 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 336 6.1E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 428 615 1.1E-42 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 4 689 0.0 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 9 692 42.463 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Pfam PF00702 haloacid dehalogenase-like hydrolase 300 542 2.2E-31 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Gene3D G3DSA:2.70.150.20 102 211 4.4E-25 T 14-10-2018 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Gene3D G3DSA:3.40.50.1000 503 572 1.9E-23 T 14-10-2018 IPR023214 HAD superfamily Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 SUPERFAMILY SSF81660 315 462 6.87E-32 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 SUPERFAMILY SSF81665 45 298 1.7E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 SUPERFAMILY SSF81653 115 206 1.11E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Atu3789 e4acbd0973ac4ed31f445bec7a4443c5 694 Gene3D G3DSA:3.40.1110.10 315 463 9.8E-53 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Atu4011 6c46a1a55809c4c61de4dda4a32f2d38 294 SUPERFAMILY SSF103481 42 144 1.77E-9 T 14-10-2018 Atu4011 6c46a1a55809c4c61de4dda4a32f2d38 294 SUPERFAMILY SSF103481 187 282 4.58E-11 T 14-10-2018 Atu4011 6c46a1a55809c4c61de4dda4a32f2d38 294 Pfam PF00892 EamA-like transporter family 6 140 2.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4011 6c46a1a55809c4c61de4dda4a32f2d38 294 Pfam PF00892 EamA-like transporter family 152 278 5.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1437 fddaad6da7c63778ee5280692792cfa6 310 Pfam PF00892 EamA-like transporter family 7 140 3.3E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1437 fddaad6da7c63778ee5280692792cfa6 310 SUPERFAMILY SSF103481 43 145 2.75E-7 T 14-10-2018 Atu1134 939bcf4d679a91844e4e65e2cc6ba221 315 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 15 291 1.9E-13 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Atu4335 4b1a461638de51a7b54a8dfd83235914 399 Pfam PF00498 FHA domain 28 93 1.1E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Atu4335 4b1a461638de51a7b54a8dfd83235914 399 SUPERFAMILY SSF49879 18 111 1.4E-23 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Atu4335 4b1a461638de51a7b54a8dfd83235914 399 Gene3D G3DSA:2.60.200.20 5 106 1.3E-18 T 14-10-2018 Atu4335 4b1a461638de51a7b54a8dfd83235914 399 SMART SM00240 25 76 2.1E-8 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 Pfam PF00459 Inositol monophosphatase family 18 245 5.5E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 Gene3D G3DSA:3.40.190.80 152 265 6.3E-16 T 14-10-2018 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 SUPERFAMILY SSF56655 9 262 4.06E-63 T 14-10-2018 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 Gene3D G3DSA:3.30.540.10 2 147 6.0E-36 T 14-10-2018 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 8.0E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 8.0E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 8.0E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 8.0E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu0694 36df1ede3f02482401fe9fb8eace8213 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 8.0E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Atu5129 383033700096ff89ded4b01f8ce5d219 360 Gene3D G3DSA:3.40.190.10 144 267 2.6E-126 T 14-10-2018 Atu5129 383033700096ff89ded4b01f8ce5d219 360 Pfam PF13416 Bacterial extracellular solute-binding protein 57 315 1.2E-31 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5129 383033700096ff89ded4b01f8ce5d219 360 SUPERFAMILY SSF53850 36 358 1.53E-48 T 14-10-2018 Atu5129 383033700096ff89ded4b01f8ce5d219 360 Gene3D G3DSA:3.40.190.10 40 358 2.6E-126 T 14-10-2018 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 580 707 3.3E-55 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 Gene3D G3DSA:3.20.20.240 27 543 9.3E-244 T 14-10-2018 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 Pfam PF01642 Methylmalonyl-CoA mutase 29 541 5.8E-241 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 Gene3D G3DSA:3.40.50.280 548 709 3.4E-49 T 14-10-2018 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 SUPERFAMILY SSF52242 550 706 3.92E-53 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 370 395 - T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 Pfam PF02310 B12 binding domain 583 698 9.1E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 27 545 1.9E-265 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Atu3580 1b34a2199f2cde4b3d384dcea5988e6c 713 SUPERFAMILY SSF51703 5 543 1.04E-225 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Atu3514 181812630ff234ef0522992223d9533c 71 Pfam PF04964 Flp/Fap pilin component 23 68 1.5E-18 T 14-10-2018 IPR007047 Flp/Fap pilin component Atu0766 07d5dc4b5e1b87db7d9001475fd2bd38 174 Pfam PF06776 Invasion associated locus B (IalB) protein 39 173 7.9E-35 T 14-10-2018 IPR010642 Invasion protein B Atu0766 07d5dc4b5e1b87db7d9001475fd2bd38 174 Gene3D G3DSA:2.60.40.1880 36 174 1.5E-28 T 14-10-2018 IPR038696 Invasion protein B superfamily Atu1283 b415e5e42f8a276a5439ff823688722c 480 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 469 18.449 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Atu1283 b415e5e42f8a276a5439ff823688722c 480 Pfam PF00361 Proton-conducting membrane transporter 125 419 3.9E-89 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1283 b415e5e42f8a276a5439ff823688722c 480 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 12 464 1.8E-148 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Atu4442 cf7e9274a33c83e1dc5e087e5ef2d501 182 Pfam PF01965 DJ-1/PfpI family 2 177 9.3E-52 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu4442 cf7e9274a33c83e1dc5e087e5ef2d501 182 Gene3D G3DSA:3.40.50.880 1 182 2.1E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4442 cf7e9274a33c83e1dc5e087e5ef2d501 182 SUPERFAMILY SSF52317 2 180 1.05E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4442 cf7e9274a33c83e1dc5e087e5ef2d501 182 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 2 180 9.7E-58 T 14-10-2018 IPR006286 Deglycase PfpI Atu3685 28ddd9503d028ba3bf2a9ac3ea583e6c 248 Gene3D G3DSA:3.40.50.1820 2 224 7.7E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3685 28ddd9503d028ba3bf2a9ac3ea583e6c 248 SUPERFAMILY SSF53474 4 220 9.79E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3685 28ddd9503d028ba3bf2a9ac3ea583e6c 248 Pfam PF00975 Thioesterase domain 6 220 6.1E-37 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 Atu3685 28ddd9503d028ba3bf2a9ac3ea583e6c 248 SMART SM00824 Thioesterase 8 189 0.008 T 14-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 Atu4378 83e23e9379c36b250c3f147795353c78 186 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 43 168 6.1E-35 T 14-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 Atu2000 3a897773363e892f185b62cf2f7c05f7 127 Gene3D G3DSA:1.10.10.10 3 124 6.7E-42 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2000 3a897773363e892f185b62cf2f7c05f7 127 Pfam PF01638 HxlR-like helix-turn-helix 25 110 1.9E-26 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Atu2000 3a897773363e892f185b62cf2f7c05f7 127 SUPERFAMILY SSF46785 12 118 8.78E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0080 f854c91f71f884d2cc429ba4d0a366f7 314 Pfam PF03547 Membrane transport protein 4 153 6.8E-19 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Atu0080 f854c91f71f884d2cc429ba4d0a366f7 314 Pfam PF03547 Membrane transport protein 162 309 1.1E-14 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Atu2119 87e8bc7070d1eb14a279426a709c1f1d 416 Pfam PF11899 Protein of unknown function (DUF3419) 37 413 3.4E-116 T 14-10-2018 IPR021829 Protein of unknown function DUF3419 Atu2119 87e8bc7070d1eb14a279426a709c1f1d 416 SUPERFAMILY SSF53335 46 365 1.45E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3790 aa2ab2ac066a7c91ccc117974345ec15 567 Pfam PF03814 Potassium-transporting ATPase A subunit 11 559 7.2E-245 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atu3790 aa2ab2ac066a7c91ccc117974345ec15 567 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 561 35.87 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atu3790 aa2ab2ac066a7c91ccc117974345ec15 567 PIRSF PIRSF001294 1 563 9.8E-242 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atu3790 aa2ab2ac066a7c91ccc117974345ec15 567 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 560 4.6E-234 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.8E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.8E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 SUPERFAMILY SSF46785 5 60 1.15E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 SMART SM00420 6 58 8.7E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 SUPERFAMILY SSF100950 79 236 1.47E-28 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 Pfam PF00455 DeoR C terminal sensor domain 79 234 7.9E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.4E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu3486 b350221490768d05b01c2f7e5cfd0bd8 276 SMART SM01134 77 236 8.7E-50 T 14-10-2018 Atu2721 c8a724198362f36ce3c70f9e981b283c 304 SUPERFAMILY SSF48576 38 296 7.67E-78 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atu2721 c8a724198362f36ce3c70f9e981b283c 304 Pfam PF00348 Polyprenyl synthetase 40 270 3.5E-52 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Atu2721 c8a724198362f36ce3c70f9e981b283c 304 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 223 235 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Atu2721 c8a724198362f36ce3c70f9e981b283c 304 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 107 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Atu2721 c8a724198362f36ce3c70f9e981b283c 304 Gene3D G3DSA:1.10.600.10 2 304 6.4E-118 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 SUPERFAMILY SSF46894 171 250 8.16E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 189 243 4.5E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 220 4.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 220 232 4.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 204 4.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 Gene3D G3DSA:1.10.10.10 184 250 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 ProSitePatterns PS00622 LuxR-type HTH domain signature. 204 231 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0525 2c4725dbf18f1708bed8a50a0170f43a 251 SMART SM00421 187 244 4.3E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4676 b7767d4be7da3bc1b93ab0e248b0d665 345 Gene3D G3DSA:1.10.1530.10 16 331 2.0E-85 T 14-10-2018 Atu4676 b7767d4be7da3bc1b93ab0e248b0d665 345 Gene3D G3DSA:3.30.1370.60 65 306 2.0E-85 T 14-10-2018 Atu4676 b7767d4be7da3bc1b93ab0e248b0d665 345 Gene3D G3DSA:3.30.60.50 182 229 2.0E-85 T 14-10-2018 Atu4676 b7767d4be7da3bc1b93ab0e248b0d665 345 Pfam PF02615 Malate/L-lactate dehydrogenase 8 332 3.4E-86 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 Atu4676 b7767d4be7da3bc1b93ab0e248b0d665 345 SUPERFAMILY SSF89733 6 338 2.75E-91 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 Atu0490 b932e70449a982cdcec845bcf8782a90 203 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 17 190 3.8E-32 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Atu2399 a63aeaf11082f994578974ae40eab496 178 SUPERFAMILY SSF52833 2 174 2.24E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu2399 a63aeaf11082f994578974ae40eab496 178 Pfam PF08534 Redoxin 3 151 1.9E-30 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Atu2399 a63aeaf11082f994578974ae40eab496 178 Gene3D G3DSA:3.40.30.10 2 175 2.4E-64 T 14-10-2018 Atu0168 aa385f058af39abc70ccdd311d43d205 183 SMART SM00072 2 178 2.5E-4 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Atu0168 aa385f058af39abc70ccdd311d43d205 183 Gene3D G3DSA:3.30.63.10 33 88 1.6E-16 T 14-10-2018 Atu0168 aa385f058af39abc70ccdd311d43d205 183 Pfam PF00625 Guanylate kinase 2 176 2.9E-7 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Atu0168 aa385f058af39abc70ccdd311d43d205 183 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 1 176 1.7E-78 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0168 aa385f058af39abc70ccdd311d43d205 183 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 175 34.627 T 14-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0168 aa385f058af39abc70ccdd311d43d205 183 Gene3D G3DSA:3.40.50.300 2 147 1.6E-16 T 14-10-2018 Atu0168 aa385f058af39abc70ccdd311d43d205 183 SUPERFAMILY SSF52540 1 177 1.51E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5118 8ceed166d93c62ba4b213d1fba00f57e 413 SUPERFAMILY SSF53383 36 408 5.98E-52 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu5118 8ceed166d93c62ba4b213d1fba00f57e 413 Gene3D G3DSA:3.90.1150.10 56 396 2.4E-75 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu5118 8ceed166d93c62ba4b213d1fba00f57e 413 Gene3D G3DSA:3.40.640.10 74 310 2.4E-75 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu5118 8ceed166d93c62ba4b213d1fba00f57e 413 Pfam PF00155 Aminotransferase class I and II 170 403 2.4E-15 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu2304 43a4689f366d2954b5907f53d7aaaf89 381 Pfam PF05992 SbmA/BacA-like family 41 354 2.8E-144 T 14-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 Atu2304 43a4689f366d2954b5907f53d7aaaf89 381 SUPERFAMILY SSF90123 43 351 6.15E-9 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu4842 fa1143a7b0684afddbda3864a3ae9253 348 Pfam PF13407 Periplasmic binding protein domain 45 301 5.3E-48 T 14-10-2018 IPR025997 Periplasmic binding protein Atu4842 fa1143a7b0684afddbda3864a3ae9253 348 SUPERFAMILY SSF53822 40 348 6.87E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4842 fa1143a7b0684afddbda3864a3ae9253 348 Gene3D G3DSA:3.40.50.2300 146 281 1.1E-116 T 14-10-2018 Atu4842 fa1143a7b0684afddbda3864a3ae9253 348 Gene3D G3DSA:3.40.50.2300 41 330 1.1E-116 T 14-10-2018 Atu5091 b2668796577835cd60d0a253fc45156d 397 Gene3D G3DSA:2.40.30.170 292 334 1.0E-7 T 14-10-2018 Atu5091 b2668796577835cd60d0a253fc45156d 397 Gene3D G3DSA:1.10.287.470 219 244 1.0E-7 T 14-10-2018 Atu5091 b2668796577835cd60d0a253fc45156d 397 Gene3D G3DSA:1.10.287.470 72 144 1.6E-5 T 14-10-2018 Atu5091 b2668796577835cd60d0a253fc45156d 397 Pfam PF13437 HlyD family secretion protein 262 339 1.2E-8 T 14-10-2018 Atu5091 b2668796577835cd60d0a253fc45156d 397 Gene3D G3DSA:2.40.50.100 245 291 1.0E-7 T 14-10-2018 Atu5091 b2668796577835cd60d0a253fc45156d 397 Gene3D G3DSA:2.40.50.100 38 71 1.6E-5 T 14-10-2018 Atu5445 17c967b85070aed7de56f593fe4856de 364 Gene3D G3DSA:3.20.20.70 4 363 4.1E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu5445 17c967b85070aed7de56f593fe4856de 364 SUPERFAMILY SSF51395 2 360 6.11E-124 T 14-10-2018 Atu5445 17c967b85070aed7de56f593fe4856de 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 336 1.3E-85 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Atu2166 3977079fbbc2fb0aa353a25b10e17be6 320 Pfam PF06059 Domain of Unknown Function (DUF930) 222 317 1.3E-23 T 14-10-2018 IPR009273 Protein of unknown function DUF930 Atu4698 f0ac2748e6e165f49fbe9bd34e780cfb 397 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 52 60 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Atu4698 f0ac2748e6e165f49fbe9bd34e780cfb 397 Gene3D G3DSA:2.30.40.10 3 386 9.8E-102 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4698 f0ac2748e6e165f49fbe9bd34e780cfb 397 Pfam PF07969 Amidohydrolase family 40 386 2.6E-21 T 14-10-2018 IPR013108 Amidohydrolase 3 Atu4698 f0ac2748e6e165f49fbe9bd34e780cfb 397 SUPERFAMILY SSF51338 1 70 2.08E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Atu4698 f0ac2748e6e165f49fbe9bd34e780cfb 397 SUPERFAMILY SSF51556 51 357 6.33E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu4698 f0ac2748e6e165f49fbe9bd34e780cfb 397 Gene3D G3DSA:3.20.20.140 52 347 9.8E-102 T 14-10-2018 Atu0866 3350eca465ec67940e4349846118cf54 203 Pfam PF01810 LysE type translocator 11 200 6.0E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu0866 3350eca465ec67940e4349846118cf54 203 PIRSF PIRSF006324 1 203 1.7E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu0834 a2e999a9c11116d1031524746b5af63b 332 Pfam PF06089 L-asparaginase II 7 328 1.2E-116 T 14-10-2018 IPR010349 L-asparaginase II Atu3480 6446ac92115107717a584b1a33fb862a 308 Gene3D G3DSA:3.20.20.70 1 300 3.7E-134 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3480 6446ac92115107717a584b1a33fb862a 308 Pfam PF00682 HMGL-like 6 278 3.2E-53 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Atu3480 6446ac92115107717a584b1a33fb862a 308 SUPERFAMILY SSF51569 2 291 9.34E-74 T 14-10-2018 Atu2592 a851277ca36361839cb5361cdf206847 383 Gene3D G3DSA:3.40.50.2000 209 362 3.5E-24 T 14-10-2018 Atu2592 a851277ca36361839cb5361cdf206847 383 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 221 354 4.2E-13 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Atu2592 a851277ca36361839cb5361cdf206847 383 SUPERFAMILY SSF53756 19 358 4.08E-20 T 14-10-2018 Atu0352 5145cbafdee05cf5e6d392c8b8b35e24 222 SUPERFAMILY SSF53067 3 107 1.88E-26 T 14-10-2018 Atu0352 5145cbafdee05cf5e6d392c8b8b35e24 222 Pfam PF00814 Glycoprotease family 31 147 9.6E-26 T 14-10-2018 IPR000905 Gcp-like domain Atu0352 5145cbafdee05cf5e6d392c8b8b35e24 222 Gene3D G3DSA:3.30.420.40 97 165 1.3E-35 T 14-10-2018 Atu0352 5145cbafdee05cf5e6d392c8b8b35e24 222 Gene3D G3DSA:3.30.420.40 3 96 1.3E-35 T 14-10-2018 Atu0352 5145cbafdee05cf5e6d392c8b8b35e24 222 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 204 1.2E-48 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Atu4572 ea758a88d1339d04546f50356ab1fdd5 298 SUPERFAMILY SSF51695 27 285 4.97E-40 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu4572 ea758a88d1339d04546f50356ab1fdd5 298 Gene3D G3DSA:3.20.20.190 18 289 1.1E-70 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu4572 ea758a88d1339d04546f50356ab1fdd5 298 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 143 6.7E-22 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Atu4572 ea758a88d1339d04546f50356ab1fdd5 298 Pfam PF16387 Domain of unknown function 186 285 5.4E-27 T 14-10-2018 IPR032160 Domain of unknown function DUF4996 Atu3023 cacad7c6a20167db7dfac1c442385304 293 SUPERFAMILY SSF161098 9 292 2.24E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu3023 cacad7c6a20167db7dfac1c442385304 293 Gene3D G3DSA:1.10.3720.10 3 284 3.1E-81 T 14-10-2018 IPR035906 MetI-like superfamily Atu3023 cacad7c6a20167db7dfac1c442385304 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 286 1.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3809 844b60e6f51888a845b093470128c85a 288 SUPERFAMILY SSF51430 14 286 1.01E-63 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3809 844b60e6f51888a845b093470128c85a 288 PRINTS PR00069 Aldo-keto reductase signature 49 73 6.1E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3809 844b60e6f51888a845b093470128c85a 288 PRINTS PR00069 Aldo-keto reductase signature 150 167 6.1E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3809 844b60e6f51888a845b093470128c85a 288 PRINTS PR00069 Aldo-keto reductase signature 220 244 6.1E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3809 844b60e6f51888a845b093470128c85a 288 Pfam PF00248 Aldo/keto reductase family 19 286 1.3E-51 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu3809 844b60e6f51888a845b093470128c85a 288 Gene3D G3DSA:3.20.20.100 11 287 5.4E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu0312 725a310ba4b53d9a265897e9ace560e7 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 305 1.4E-70 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu0312 725a310ba4b53d9a265897e9ace560e7 322 Gene3D G3DSA:3.40.50.1100 56 158 4.5E-124 T 14-10-2018 Atu0312 725a310ba4b53d9a265897e9ace560e7 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 16 317 8.8E-135 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Atu0312 725a310ba4b53d9a265897e9ace560e7 322 Gene3D G3DSA:3.40.50.1100 18 312 4.5E-124 T 14-10-2018 Atu0312 725a310ba4b53d9a265897e9ace560e7 322 SUPERFAMILY SSF53686 12 317 4.06E-104 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu0312 725a310ba4b53d9a265897e9ace560e7 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 16 317 1.7E-130 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Atu5421 98b7f48fe6cb460face59f268f30348e 327 SUPERFAMILY SSF161098 46 321 1.7E-42 T 14-10-2018 IPR035906 MetI-like superfamily Atu5421 98b7f48fe6cb460face59f268f30348e 327 Gene3D G3DSA:1.10.3720.10 45 325 4.1E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu5421 98b7f48fe6cb460face59f268f30348e 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 191 319 1.4E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1137 14e0ff4146e7b8980dbf97252a47e6dd 209 Pfam PF00293 NUDIX domain 57 173 2.4E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu1137 14e0ff4146e7b8980dbf97252a47e6dd 209 SUPERFAMILY SSF55811 25 202 1.62E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu1137 14e0ff4146e7b8980dbf97252a47e6dd 209 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 19 198 5.2E-44 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Atu1137 14e0ff4146e7b8980dbf97252a47e6dd 209 Gene3D G3DSA:3.90.79.10 4 208 3.4E-55 T 14-10-2018 Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 SMART SM00418 30 108 7.4E-26 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 47 7.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 7.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.4E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 Pfam PF12840 Helix-turn-helix domain 31 86 4.7E-12 T 14-10-2018 Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 Gene3D G3DSA:1.10.10.10 19 117 1.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3466 a8e4a52607a4228b02d75f82dd6a4fbf 117 SUPERFAMILY SSF46785 24 112 1.65E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2526 13b7fb2cd1081c0f2f507b4a4cf27a17 112 Gene3D G3DSA:3.30.70.1060 9 104 3.7E-13 T 14-10-2018 Atu2526 13b7fb2cd1081c0f2f507b4a4cf27a17 112 Pfam PF03795 YCII-related domain 10 100 3.6E-10 T 14-10-2018 IPR005545 YCII-related Atu2526 13b7fb2cd1081c0f2f507b4a4cf27a17 112 SUPERFAMILY SSF54909 10 102 2.31E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 Gene3D G3DSA:1.20.140.10 265 428 4.9E-41 T 14-10-2018 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 SUPERFAMILY SSF47203 258 432 1.77E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 144 3.9E-11 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 Gene3D G3DSA:1.10.540.10 25 145 2.8E-14 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 SUPERFAMILY SSF56645 26 258 5.5E-52 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 149 250 2.4E-21 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 Gene3D G3DSA:2.40.110.10 148 264 6.9E-30 T 14-10-2018 Atu1414 317a205f9bf1eaeeb9f68e0c67d82510 520 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 260 423 6.4E-25 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Atu2699 de7133037f88ac885c018ecc3cf0497e 126 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 3.3E-31 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2699 de7133037f88ac885c018ecc3cf0497e 126 Pfam PF00886 Ribosomal protein S16 9 70 2.3E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2699 de7133037f88ac885c018ecc3cf0497e 126 SUPERFAMILY SSF54565 3 85 7.59E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2699 de7133037f88ac885c018ecc3cf0497e 126 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.58 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2699 de7133037f88ac885c018ecc3cf0497e 126 Gene3D G3DSA:3.30.1320.10 1 124 9.7E-36 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0670 72b21e8d56f96cf373c4acd2858dc7fa 209 Gene3D G3DSA:1.10.340.30 14 200 3.8E-75 T 14-10-2018 Atu0670 72b21e8d56f96cf373c4acd2858dc7fa 209 SUPERFAMILY SSF48150 14 198 5.34E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Atu0670 72b21e8d56f96cf373c4acd2858dc7fa 209 Pfam PF03352 Methyladenine glycosylase 18 195 1.9E-71 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Atu0877 c948a19a574a3921ae212a9fe98bacb8 283 SUPERFAMILY SSF56300 7 280 3.07E-56 T 14-10-2018 Atu0877 c948a19a574a3921ae212a9fe98bacb8 283 Pfam PF00149 Calcineurin-like phosphoesterase 9 230 5.2E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu0877 c948a19a574a3921ae212a9fe98bacb8 283 Gene3D G3DSA:3.60.21.10 4 274 3.1E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu2073 256bf6096ad6eb9ef9852532ddbbabb7 202 SUPERFAMILY SSF52833 39 199 3.4E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu2073 256bf6096ad6eb9ef9852532ddbbabb7 202 Pfam PF02630 SCO1/SenC 11 177 5.4E-39 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu2073 256bf6096ad6eb9ef9852532ddbbabb7 202 Gene3D G3DSA:3.40.30.10 24 199 3.4E-48 T 14-10-2018 Atu2492 0d11dec61850a9a1a37c2656870d7682 614 Gene3D G3DSA:1.20.1250.20 5 346 1.4E-54 T 14-10-2018 Atu2492 0d11dec61850a9a1a37c2656870d7682 614 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu2492 0d11dec61850a9a1a37c2656870d7682 614 Pfam PF00083 Sugar (and other) transporter 10 319 2.7E-28 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu2492 0d11dec61850a9a1a37c2656870d7682 614 Pfam PF00083 Sugar (and other) transporter 487 612 1.4E-7 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu2492 0d11dec61850a9a1a37c2656870d7682 614 Gene3D G3DSA:1.20.1250.20 482 614 1.1E-12 T 14-10-2018 Atu2492 0d11dec61850a9a1a37c2656870d7682 614 SUPERFAMILY SSF103473 496 610 2.88E-11 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2492 0d11dec61850a9a1a37c2656870d7682 614 SUPERFAMILY SSF103473 1 325 5.49E-52 T 14-10-2018 IPR036259 MFS transporter superfamily Atu3965 e72b65bc986bb49876f887f52abaafed 338 Gene3D G3DSA:3.40.50.720 6 312 7.6E-132 T 14-10-2018 Atu3965 e72b65bc986bb49876f887f52abaafed 338 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 139 220 5.9E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu3965 e72b65bc986bb49876f887f52abaafed 338 SUPERFAMILY SSF55347 132 290 3.92E-23 T 14-10-2018 Atu3965 e72b65bc986bb49876f887f52abaafed 338 SUPERFAMILY SSF51735 3 150 1.51E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3965 e72b65bc986bb49876f887f52abaafed 338 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 52 124 7.0E-11 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3965 e72b65bc986bb49876f887f52abaafed 338 Gene3D G3DSA:3.30.360.10 125 313 7.6E-132 T 14-10-2018 Atu5403 954b38ec2c5ad78421d8e3450977d8ff 443 Pfam PF13416 Bacterial extracellular solute-binding protein 62 374 7.4E-29 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5403 954b38ec2c5ad78421d8e3450977d8ff 443 SUPERFAMILY SSF53850 41 439 1.58E-63 T 14-10-2018 Atu5403 954b38ec2c5ad78421d8e3450977d8ff 443 Gene3D G3DSA:3.40.190.10 164 430 1.0E-71 T 14-10-2018 Atu5403 954b38ec2c5ad78421d8e3450977d8ff 443 Gene3D G3DSA:3.40.190.10 58 395 1.0E-71 T 14-10-2018 Atu0200 25400061b115954529ee6a6e86a04ff5 348 Pfam PF05145 Transition state regulatory protein AbrB 33 337 1.5E-73 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Atu0200 25400061b115954529ee6a6e86a04ff5 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 337 1.6E-37 T 14-10-2018 IPR017516 AbrB duplication Atu0200 25400061b115954529ee6a6e86a04ff5 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 10 165 1.9E-37 T 14-10-2018 IPR017516 AbrB duplication Atu0200 25400061b115954529ee6a6e86a04ff5 348 PIRSF PIRSF038991 1 345 5.4E-68 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Atu3501 c190e63591b289580c8f1b61d309edd7 341 SUPERFAMILY SSF52540 3 241 6.63E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3501 c190e63591b289580c8f1b61d309edd7 341 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 240 2.8E-108 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 Atu3501 c190e63591b289580c8f1b61d309edd7 341 Pfam PF00005 ABC transporter 19 162 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3501 c190e63591b289580c8f1b61d309edd7 341 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3501 c190e63591b289580c8f1b61d309edd7 341 SUPERFAMILY SSF50331 238 338 7.14E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu3501 c190e63591b289580c8f1b61d309edd7 341 Gene3D G3DSA:3.40.50.300 2 259 7.9E-79 T 14-10-2018 Atu3501 c190e63591b289580c8f1b61d309edd7 341 SMART SM00382 27 212 5.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4661 ac04bb81ee860e8fd9a367d10f2624ad 695 Gene3D G3DSA:3.10.105.10 393 632 1.1E-32 T 14-10-2018 Atu4661 ac04bb81ee860e8fd9a367d10f2624ad 695 SUPERFAMILY SSF53850 104 657 2.35E-80 T 14-10-2018 Atu4661 ac04bb81ee860e8fd9a367d10f2624ad 695 PIRSF PIRSF002741 404 664 1.4E-15 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4661 ac04bb81ee860e8fd9a367d10f2624ad 695 PIRSF PIRSF002741 135 385 1.4E-27 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4661 ac04bb81ee860e8fd9a367d10f2624ad 695 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 155 554 1.8E-69 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4661 ac04bb81ee860e8fd9a367d10f2624ad 695 Gene3D G3DSA:3.40.190.10 94 370 8.7E-45 T 14-10-2018 Atu1521 50072fc8f47b6a693bfea770cb900555 329 Gene3D G3DSA:3.40.50.1980 26 216 4.5E-55 T 14-10-2018 Atu1521 50072fc8f47b6a693bfea770cb900555 329 Gene3D G3DSA:3.40.50.1980 218 329 3.9E-39 T 14-10-2018 Atu1521 50072fc8f47b6a693bfea770cb900555 329 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 327 7.3E-69 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Atu1521 50072fc8f47b6a693bfea770cb900555 329 SUPERFAMILY SSF53807 25 328 1.72E-79 T 14-10-2018 Atu0993 ba5a6813905db6a6aabe43344d39b0cd 208 SUPERFAMILY SSF46689 5 75 1.54E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0993 ba5a6813905db6a6aabe43344d39b0cd 208 SUPERFAMILY SSF48498 80 184 1.74E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu0993 ba5a6813905db6a6aabe43344d39b0cd 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 5.6E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0993 ba5a6813905db6a6aabe43344d39b0cd 208 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 180 1.7E-12 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Atu0993 ba5a6813905db6a6aabe43344d39b0cd 208 Gene3D G3DSA:1.10.357.10 5 195 2.1E-44 T 14-10-2018 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 155 169 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 Gene3D G3DSA:3.10.290.10 53 112 2.9E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 122 276 4.7E-34 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 Pfam PF01479 S4 domain 57 92 9.3E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 Gene3D G3DSA:3.30.70.1560 179 269 2.5E-45 T 14-10-2018 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 Pfam PF00849 RNA pseudouridylate synthase 118 193 9.8E-7 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 SMART SM00363 57 116 6.0E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 Gene3D G3DSA:3.30.70.580 120 275 2.5E-45 T 14-10-2018 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 SUPERFAMILY SSF55174 41 122 2.55E-11 T 14-10-2018 Atu0689 3d7a0475a30b5b14b6e3589e3669f611 669 SUPERFAMILY SSF55120 115 278 1.84E-34 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Atu1560 cd833fbb295f35decb3c9b3079cec8d9 281 SUPERFAMILY SSF48576 6 279 1.06E-53 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atu1560 cd833fbb295f35decb3c9b3079cec8d9 281 Pfam PF00494 Squalene/phytoene synthase 14 266 1.3E-46 T 14-10-2018 Atu1560 cd833fbb295f35decb3c9b3079cec8d9 281 Gene3D G3DSA:1.10.600.10 2 252 2.5E-28 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Atu3507 8fcb6c429a62f0efab85c83840e4b4c6 259 Gene3D G3DSA:2.30.30.40 16 71 1.2E-11 T 14-10-2018 Atu3507 8fcb6c429a62f0efab85c83840e4b4c6 259 Pfam PF08239 Bacterial SH3 domain 19 70 4.8E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Atu8172 ec648dbe9c32a2f09552df44c9ff7953 166 Pfam PF10722 Putative bacterial sensory transduction regulator 14 143 3.6E-30 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN Atu1155 f4782523f96b99e6eec8a013d557b29c 461 Pfam PF06123 Inner membrane protein CreD 14 447 4.6E-127 T 14-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD Atu1155 f4782523f96b99e6eec8a013d557b29c 461 PIRSF PIRSF004548 1 460 1.3E-160 T 14-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD Atu1541 e10f4db29eab2c8f685126e9b6416456 691 Pfam PF00924 Mechanosensitive ion channel 459 660 4.8E-39 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Atu1541 e10f4db29eab2c8f685126e9b6416456 691 SUPERFAMILY SSF50182 502 564 6.87E-11 T 14-10-2018 IPR010920 LSM domain superfamily Atu1541 e10f4db29eab2c8f685126e9b6416456 691 SUPERFAMILY SSF82689 565 661 1.44E-10 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Atu1541 e10f4db29eab2c8f685126e9b6416456 691 SUPERFAMILY SSF82861 448 500 1.02E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Atu1541 e10f4db29eab2c8f685126e9b6416456 691 Gene3D G3DSA:2.30.30.60 517 566 1.3E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Atu1541 e10f4db29eab2c8f685126e9b6416456 691 Gene3D G3DSA:3.30.70.100 572 658 7.8E-15 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 SUPERFAMILY SSF111369 50 125 1.09E-9 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 Pfam PF00529 HlyD membrane-fusion protein of T1SS 27 336 8.8E-8 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 291 9.2E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 Gene3D G3DSA:2.40.30.170 229 348 3.7E-34 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 Gene3D G3DSA:1.10.287.470 116 183 2.4E-9 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 Gene3D G3DSA:1.10.287.470 83 113 4.9E-12 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 SUPERFAMILY SSF111369 119 178 5.49E-6 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 SUPERFAMILY SSF111369 192 287 3.66E-12 T 14-10-2018 Atu1087 ca5016063a3e41763acda3fe10df9ca9 355 Gene3D G3DSA:2.40.50.100 51 82 4.9E-12 T 14-10-2018 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 519 1.2E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4775 324927bb94fffcd04fd071f98fd00d39 526 SUPERFAMILY SSF47384 288 368 1.08E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 Gene3D G3DSA:3.30.565.10 368 525 1.6E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4775 324927bb94fffcd04fd071f98fd00d39 526 Gene3D G3DSA:3.30.450.20 123 278 1.3E-5 T 14-10-2018 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 SUPERFAMILY SSF55874 355 519 6.29E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4775 324927bb94fffcd04fd071f98fd00d39 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 8.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 8.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 8.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 8.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 Pfam PF00512 His Kinase A (phospho-acceptor) domain 301 363 1.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 Gene3D G3DSA:1.10.287.130 279 364 2.8E-18 T 14-10-2018 Atu4775 324927bb94fffcd04fd071f98fd00d39 526 SMART SM00387 410 521 2.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu4775 324927bb94fffcd04fd071f98fd00d39 526 SMART SM00388 299 369 1.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 Gene3D G3DSA:1.10.1040.50 192 293 1.3E-35 T 14-10-2018 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 SUPERFAMILY SSF51735 4 187 1.25E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 SUPERFAMILY SSF48179 187 288 4.17E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 PIRSF PIRSF000105 1 293 4.4E-83 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 Gene3D G3DSA:3.40.50.720 4 191 4.1E-64 T 14-10-2018 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 185 2.5E-59 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 284 8.7E-35 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu3597 e11a11a53e7bed76cf712cc6e0e1dbb2 293 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 185 210 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Atu4070 3638dc576cb461772fadaec620b63668 184 SUPERFAMILY SSF103025 52 181 1.35E-9 T 14-10-2018 Atu4070 3638dc576cb461772fadaec620b63668 184 Gene3D G3DSA:3.30.70.1520 30 104 1.3E-43 T 14-10-2018 Atu4070 3638dc576cb461772fadaec620b63668 184 Gene3D G3DSA:3.30.1360.120 23 180 1.3E-43 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Atu4070 3638dc576cb461772fadaec620b63668 184 Pfam PF04268 Sarcosine oxidase, gamma subunit family 41 181 6.3E-43 T 14-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4070 3638dc576cb461772fadaec620b63668 184 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 37 180 1.7E-47 T 14-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu5387 6d8ef56c3284a1b3ed04f6aa72d424a3 154 Gene3D G3DSA:3.10.450.50 10 154 1.6E-74 T 14-10-2018 Atu5387 6d8ef56c3284a1b3ed04f6aa72d424a3 154 SUPERFAMILY SSF54427 2 154 5.21E-77 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu5387 6d8ef56c3284a1b3ed04f6aa72d424a3 154 Pfam PF07080 Protein of unknown function (DUF1348) 7 136 1.6E-62 T 14-10-2018 IPR009783 Protein of unknown function DUF1348 Atu3049 1b637d0067740dd6f44367d969fe72c2 553 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 460 9.4E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3049 1b637d0067740dd6f44367d969fe72c2 553 Gene3D G3DSA:3.10.105.10 295 520 2.8E-127 T 14-10-2018 Atu3049 1b637d0067740dd6f44367d969fe72c2 553 PIRSF PIRSF002741 6 551 1.3E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3049 1b637d0067740dd6f44367d969fe72c2 553 SUPERFAMILY SSF53850 45 550 5.43E-129 T 14-10-2018 Atu3049 1b637d0067740dd6f44367d969fe72c2 553 Gene3D G3DSA:3.90.76.10 78 200 2.8E-127 T 14-10-2018 Atu3049 1b637d0067740dd6f44367d969fe72c2 553 Gene3D G3DSA:3.40.190.10 56 534 2.8E-127 T 14-10-2018 Atu0764 1ee18e23d21a7e3ea6296ac6ee945c91 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 61 3.4E-4 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0764 1ee18e23d21a7e3ea6296ac6ee945c91 145 Gene3D G3DSA:3.10.180.10 2 144 2.1E-52 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0764 1ee18e23d21a7e3ea6296ac6ee945c91 145 SUPERFAMILY SSF54593 9 133 3.62E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0348 66f11ba6eb2ef41601a10063d8bd9433 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 8.6E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu0348 66f11ba6eb2ef41601a10063d8bd9433 134 Gene3D G3DSA:3.10.180.10 2 131 2.8E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0348 66f11ba6eb2ef41601a10063d8bd9433 134 SUPERFAMILY SSF54593 7 133 3.36E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3102 df848d9d2b74c04a6c36813c11f3d0b9 424 SUPERFAMILY SSF53850 26 422 9.83E-61 T 14-10-2018 Atu3102 df848d9d2b74c04a6c36813c11f3d0b9 424 Pfam PF01547 Bacterial extracellular solute-binding protein 40 336 2.1E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3102 df848d9d2b74c04a6c36813c11f3d0b9 424 Gene3D G3DSA:3.40.190.10 20 424 1.3E-59 T 14-10-2018 Atu0947 833761291ad6ce805710951d124a6776 143 Gene3D G3DSA:1.10.10.10 5 55 1.4E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0947 833761291ad6ce805710951d124a6776 143 SMART SM00344 3 109 2.5E-28 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Atu0947 833761291ad6ce805710951d124a6776 143 SUPERFAMILY SSF54909 65 142 3.75E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0947 833761291ad6ce805710951d124a6776 143 SUPERFAMILY SSF46785 3 59 2.16E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0947 833761291ad6ce805710951d124a6776 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0947 833761291ad6ce805710951d124a6776 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0947 833761291ad6ce805710951d124a6776 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.5E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0947 833761291ad6ce805710951d124a6776 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Atu0947 833761291ad6ce805710951d124a6776 143 Gene3D G3DSA:3.30.70.920 58 142 2.0E-15 T 14-10-2018 Atu0947 833761291ad6ce805710951d124a6776 143 Pfam PF13404 AsnC-type helix-turn-helix domain 5 44 1.1E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Atu0947 833761291ad6ce805710951d124a6776 143 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 8.2E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu3275 53d772cae06a51b838040999a5d460cc 192 Gene3D G3DSA:2.60.40.1880 36 192 6.1E-23 T 14-10-2018 IPR038696 Invasion protein B superfamily Atu3275 53d772cae06a51b838040999a5d460cc 192 Pfam PF06776 Invasion associated locus B (IalB) protein 41 188 1.5E-30 T 14-10-2018 IPR010642 Invasion protein B Atu5002 ff671f4c4db51778cc44ef103f83149a 404 Pfam PF03428 Replication protein C N-terminal domain 13 186 5.3E-70 T 14-10-2018 IPR005090 Replication protein C Atu5002 ff671f4c4db51778cc44ef103f83149a 404 Pfam PF11800 Replication protein C C-terminal region 194 395 2.4E-80 T 14-10-2018 IPR021760 Replication protein-C C-terminal Atu0118 41d75a8be7e856f9e7cead6916e109a4 501 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 7.7E-148 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Atu0004 a07fef15f658e532eed42bfc7718bf55 193 Gene3D G3DSA:3.40.50.300 1 193 2.5E-56 T 14-10-2018 Atu0004 a07fef15f658e532eed42bfc7718bf55 193 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 190 24.818 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Atu0004 a07fef15f658e532eed42bfc7718bf55 193 SUPERFAMILY SSF52540 1 190 2.09E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0004 a07fef15f658e532eed42bfc7718bf55 193 Pfam PF01121 Dephospho-CoA kinase 2 175 2.2E-38 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Atu0004 a07fef15f658e532eed42bfc7718bf55 193 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 185 5.9E-36 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Atu3268 c1afd4c49272f667d47da7eb0c07ceb3 302 Gene3D G3DSA:1.10.3720.10 76 294 6.1E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu3268 c1afd4c49272f667d47da7eb0c07ceb3 302 SUPERFAMILY SSF161098 80 286 2.45E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu3268 c1afd4c49272f667d47da7eb0c07ceb3 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 302 6.7E-45 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3686 43355b1cf1464b30d088dd399d62102d 297 Pfam PF06276 Ferric iron reductase FhuF-like transporter 82 200 1.1E-6 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain Atu3686 43355b1cf1464b30d088dd399d62102d 297 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 256 276 3.3E-5 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 Atu2670 372a2467a2823e5af7b4fa95e53c5d72 264 SUPERFAMILY SSF52540 2 232 2.07E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2670 372a2467a2823e5af7b4fa95e53c5d72 264 Pfam PF00005 ABC transporter 23 177 1.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2670 372a2467a2823e5af7b4fa95e53c5d72 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2670 372a2467a2823e5af7b4fa95e53c5d72 264 Gene3D G3DSA:3.40.50.300 1 257 5.0E-51 T 14-10-2018 Atu2670 372a2467a2823e5af7b4fa95e53c5d72 264 SMART SM00382 31 234 2.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3868 8f6820d4c7a1e6ed08e2a0ea7a27463f 412 SUPERFAMILY SSF53300 151 402 1.78E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atu3868 8f6820d4c7a1e6ed08e2a0ea7a27463f 412 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 19 65 1.1E-10 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Atu3868 8f6820d4c7a1e6ed08e2a0ea7a27463f 412 SMART SM00327 163 404 5.8E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A Atu3868 8f6820d4c7a1e6ed08e2a0ea7a27463f 412 Pfam PF00092 von Willebrand factor type A domain 223 392 5.4E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A Atu3868 8f6820d4c7a1e6ed08e2a0ea7a27463f 412 Gene3D G3DSA:3.40.50.410 166 402 4.9E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Atu1476 07bea8456716fe25cc281915ee3b8216 277 Gene3D G3DSA:3.40.50.1820 1 277 1.5E-92 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1476 07bea8456716fe25cc281915ee3b8216 277 Pfam PF00756 Putative esterase 21 269 6.9E-55 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Atu1476 07bea8456716fe25cc281915ee3b8216 277 SUPERFAMILY SSF53474 1 277 3.75E-81 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1476 07bea8456716fe25cc281915ee3b8216 277 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 276 2.0E-130 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Atu8128 255b96432f9b575ef6f8d07f7c88f409 154 PIRSF PIRSF029208 2 154 1.1E-48 T 14-10-2018 IPR016912 Bacteriophage P2, GpU Atu8128 255b96432f9b575ef6f8d07f7c88f409 154 Pfam PF06995 Phage P2 GpU 10 130 1.1E-28 T 14-10-2018 IPR009734 Myoviridae, GpU Atu8092 54d742d9eb2e9cbd7b4bedb9a4b45c5d 198 Hamap MF_01514 UPF0314 protein . 1 194 41.133 T 14-10-2018 IPR019691 Protein of unknown function DUF2585 GO:0005886 Atu8092 54d742d9eb2e9cbd7b4bedb9a4b45c5d 198 Pfam PF10755 Protein of unknown function (DUF2585) 31 193 1.8E-87 T 14-10-2018 IPR019691 Protein of unknown function DUF2585 GO:0005886 Atu4861 86f5e413e92d8b649cd6b9aa2dff1c31 252 Pfam PF01695 IstB-like ATP binding protein 58 233 2.0E-58 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Atu4861 86f5e413e92d8b649cd6b9aa2dff1c31 252 SUPERFAMILY SSF52540 69 242 4.35E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4861 86f5e413e92d8b649cd6b9aa2dff1c31 252 SMART SM00382 102 234 4.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4861 86f5e413e92d8b649cd6b9aa2dff1c31 252 PIRSF PIRSF003073 5 252 8.1E-80 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Atu4861 86f5e413e92d8b649cd6b9aa2dff1c31 252 Gene3D G3DSA:3.40.50.300 65 251 2.6E-47 T 14-10-2018 Atu6060 84efae916e6d73d7c9b3542f471ec1bd 291 Gene3D G3DSA:3.20.20.30 14 210 2.6E-48 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu6060 84efae916e6d73d7c9b3542f471ec1bd 291 Pfam PF00296 Luciferase-like monooxygenase 18 172 1.2E-23 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu6060 84efae916e6d73d7c9b3542f471ec1bd 291 SUPERFAMILY SSF51679 15 174 1.68E-40 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu0307 cef959b3ee6d642be965d9cef54c31b8 280 Gene3D G3DSA:1.10.3720.10 5 273 1.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu0307 cef959b3ee6d642be965d9cef54c31b8 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 276 2.0E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0307 cef959b3ee6d642be965d9cef54c31b8 280 SUPERFAMILY SSF161098 5 278 6.54E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu4553 e262a7e464979833f6c9383652705364 298 Gene3D G3DSA:3.20.20.150 3 296 2.4E-42 T 14-10-2018 Atu4553 e262a7e464979833f6c9383652705364 298 SUPERFAMILY SSF51658 1 298 2.49E-57 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4553 e262a7e464979833f6c9383652705364 298 Pfam PF01261 Xylose isomerase-like TIM barrel 20 249 9.5E-34 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu1824 a13e19fc1811fd98aa6095e988e6d757 489 Pfam PF01458 Uncharacterized protein family (UPF0051) 227 460 1.7E-67 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Atu1824 a13e19fc1811fd98aa6095e988e6d757 489 SUPERFAMILY SSF101960 39 486 9.15E-138 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Atu1824 a13e19fc1811fd98aa6095e988e6d757 489 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 18 480 1.6E-190 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 Atu3064 8fd896355fc9b7f98e3a30a359402599 267 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3064 8fd896355fc9b7f98e3a30a359402599 267 Gene3D G3DSA:3.40.50.300 27 259 8.5E-60 T 14-10-2018 Atu3064 8fd896355fc9b7f98e3a30a359402599 267 Pfam PF00005 ABC transporter 44 194 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3064 8fd896355fc9b7f98e3a30a359402599 267 SMART SM00382 53 250 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3064 8fd896355fc9b7f98e3a30a359402599 267 SUPERFAMILY SSF52540 28 250 2.09E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 SUPERFAMILY SSF50475 15 206 9.73E-67 T 14-10-2018 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 3 206 38.026 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 164 206 1.5E-15 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 5 206 4.9E-72 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 Gene3D G3DSA:2.30.110.10 2 206 2.5E-77 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 25 111 1.6E-27 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 PIRSF PIRSF000190 2 206 1.4E-71 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0760 3d0249b9ea221387cb55c0f25bae84a6 206 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 174 187 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Atu0748 adbe981df9f424c8518947391dbc454c 311 SUPERFAMILY SSF52768 2 309 2.06E-97 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Atu0748 adbe981df9f424c8518947391dbc454c 311 Pfam PF00850 Histone deacetylase domain 20 305 4.0E-85 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atu0748 adbe981df9f424c8518947391dbc454c 311 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 1.3E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atu0748 adbe981df9f424c8518947391dbc454c 311 PRINTS PR01270 Histone deacetylase superfamily signature 238 248 1.3E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atu0748 adbe981df9f424c8518947391dbc454c 311 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 1.3E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atu0748 adbe981df9f424c8518947391dbc454c 311 Gene3D G3DSA:3.40.800.20 1 310 5.9E-109 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Atu1337 01600d3fec5acacf80796bcdbff9919e 121 SUPERFAMILY SSF54909 1 98 1.65E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1337 01600d3fec5acacf80796bcdbff9919e 121 Gene3D G3DSA:3.30.70.100 1 93 2.1E-21 T 14-10-2018 Atu1337 01600d3fec5acacf80796bcdbff9919e 121 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.0E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu1753 b09a25cfe454612fbf0dce575a9c403b 245 Gene3D G3DSA:1.20.1540.10 32 244 1.3E-20 T 14-10-2018 IPR035952 Rhomboid-like superfamily Atu1753 b09a25cfe454612fbf0dce575a9c403b 245 SUPERFAMILY SSF144091 24 243 2.35E-26 T 14-10-2018 Atu1753 b09a25cfe454612fbf0dce575a9c403b 245 Pfam PF01694 Rhomboid family 81 242 1.1E-25 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Atu2062 a0c41f6e27fda4407c9db87e7da52779 152 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 1.9E-28 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Atu0297 665b822fc5834d587c7e00ec038afaff 95 Gene3D G3DSA:3.30.70.100 1 95 8.2E-40 T 14-10-2018 Atu0297 665b822fc5834d587c7e00ec038afaff 95 SUPERFAMILY SSF54909 1 95 1.15E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0297 665b822fc5834d587c7e00ec038afaff 95 Pfam PF07045 Domain of unknown function (DUF1330) 3 95 3.6E-37 T 14-10-2018 IPR010753 Domain of unknown function DUF1330 Atu0868 57bd86db69407fdde62315857d9cc025 235 Pfam PF08279 HTH domain 6 59 1.8E-17 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Atu0868 57bd86db69407fdde62315857d9cc025 235 Gene3D G3DSA:1.10.10.10 1 64 1.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0868 57bd86db69407fdde62315857d9cc025 235 Pfam PF13280 WYL domain 138 228 2.6E-12 T 14-10-2018 IPR026881 WYL domain Atu0868 57bd86db69407fdde62315857d9cc025 235 SUPERFAMILY SSF46785 3 62 5.11E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1386 5dd18a7fa9bce70019f81b4814b266ef 394 SUPERFAMILY SSF53756 6 306 6.09E-24 T 14-10-2018 Atu1386 5dd18a7fa9bce70019f81b4814b266ef 394 Pfam PF02684 Lipid-A-disaccharide synthetase 7 333 6.2E-78 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atu1386 5dd18a7fa9bce70019f81b4814b266ef 394 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 369 2.4E-63 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Atu5121 a77f43b5d178101a9536fea24ba4d938 224 SMART SM00862 148 222 8.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5121 a77f43b5d178101a9536fea24ba4d938 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 2.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu5121 a77f43b5d178101a9536fea24ba4d938 224 Gene3D G3DSA:1.10.10.10 127 224 3.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5121 a77f43b5d178101a9536fea24ba4d938 224 SUPERFAMILY SSF46894 130 221 2.13E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4489 66e5f91c988e6d7866d5543436968f19 259 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 20 259 2.9E-79 T 14-10-2018 IPR004872 Lipoprotein NlpA family Atu4489 66e5f91c988e6d7866d5543436968f19 259 Pfam PF03180 NLPA lipoprotein 24 259 2.9E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family Atu4489 66e5f91c988e6d7866d5543436968f19 259 Gene3D G3DSA:3.40.190.10 23 256 2.2E-101 T 14-10-2018 Atu4489 66e5f91c988e6d7866d5543436968f19 259 SUPERFAMILY SSF53850 23 259 2.9E-92 T 14-10-2018 Atu4489 66e5f91c988e6d7866d5543436968f19 259 Gene3D G3DSA:3.40.190.10 105 209 2.2E-101 T 14-10-2018 Atu4489 66e5f91c988e6d7866d5543436968f19 259 PIRSF PIRSF002854 1 259 2.3E-106 T 14-10-2018 IPR004872 Lipoprotein NlpA family Atu0749 e12821dc4bc0b72fec6e1a237c5ba23a 187 Pfam PF02632 BioY family 29 176 5.8E-33 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Atu0749 e12821dc4bc0b72fec6e1a237c5ba23a 187 PIRSF PIRSF016661 1 183 7.2E-38 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Atu0749 e12821dc4bc0b72fec6e1a237c5ba23a 187 Gene3D G3DSA:1.10.1760.20 1 180 4.9E-49 T 14-10-2018 Atu0948 690a1324324160b0cf40c66c64a3882a 122 SUPERFAMILY SSF46785 5 119 8.44E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0948 690a1324324160b0cf40c66c64a3882a 122 Gene3D G3DSA:1.10.10.10 2 120 5.1E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0948 690a1324324160b0cf40c66c64a3882a 122 Pfam PF01638 HxlR-like helix-turn-helix 21 108 1.1E-26 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Atu5207 8563a77c2fd3a6b3d04afa0bfa66936d 277 SUPERFAMILY SSF55469 84 274 2.49E-62 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu5207 8563a77c2fd3a6b3d04afa0bfa66936d 277 Pfam PF00881 Nitroreductase family 87 254 3.0E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu5207 8563a77c2fd3a6b3d04afa0bfa66936d 277 Gene3D G3DSA:3.40.109.10 81 277 4.7E-73 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu4058 a0eca42620941b04d35ebf10fb6d9f15 321 SUPERFAMILY SSF53448 2 223 4.97E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4058 a0eca42620941b04d35ebf10fb6d9f15 321 Pfam PF00535 Glycosyl transferase family 2 5 183 6.6E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4058 a0eca42620941b04d35ebf10fb6d9f15 321 Gene3D G3DSA:3.90.550.10 1 221 4.5E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0111 a5d9c0e7554952e138e51df83044d225 239 Pfam PF08975 Domain of unknown function (DUF1868) 28 141 1.0E-43 T 14-10-2018 IPR015069 Domain of unknown function DUF1868 Atu0111 a5d9c0e7554952e138e51df83044d225 239 Gene3D G3DSA:3.90.1140.10 1 239 1.0E-90 T 14-10-2018 Atu0111 a5d9c0e7554952e138e51df83044d225 239 SUPERFAMILY SSF55144 7 236 7.06E-67 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Atu0111 a5d9c0e7554952e138e51df83044d225 239 PIRSF PIRSF033949 1 237 4.8E-107 T 14-10-2018 IPR012390 Phosphoesterase SP1827 Atu2206 5943ce39071a06dba889563e3e76028d 237 SUPERFAMILY SSF46894 144 235 7.83E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu2206 5943ce39071a06dba889563e3e76028d 237 Gene3D G3DSA:1.10.10.10 141 237 3.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2206 5943ce39071a06dba889563e3e76028d 237 Gene3D G3DSA:3.40.50.2300 6 140 6.0E-37 T 14-10-2018 Atu2206 5943ce39071a06dba889563e3e76028d 237 SMART SM00862 162 234 2.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2206 5943ce39071a06dba889563e3e76028d 237 SMART SM00448 16 126 4.7E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2206 5943ce39071a06dba889563e3e76028d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 234 9.3E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu2206 5943ce39071a06dba889563e3e76028d 237 Pfam PF00072 Response regulator receiver domain 19 126 2.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu2206 5943ce39071a06dba889563e3e76028d 237 SUPERFAMILY SSF52172 12 137 6.97E-40 T 14-10-2018 IPR011006 CheY-like superfamily Atu3350 43937c7e1c879a85c55a7b500589fb7e 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 305 2.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3350 43937c7e1c879a85c55a7b500589fb7e 313 Gene3D G3DSA:1.10.3720.10 28 300 1.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily Atu3350 43937c7e1c879a85c55a7b500589fb7e 313 SUPERFAMILY SSF161098 35 313 2.15E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu0641 3c57bbb80f65579aa00ac52364bf853e 183 Gene3D G3DSA:1.20.1440.20 11 183 2.9E-61 T 14-10-2018 IPR023353 LemA-like domain superfamily Atu0641 3c57bbb80f65579aa00ac52364bf853e 183 Pfam PF04011 LemA family 4 183 1.4E-66 T 14-10-2018 IPR007156 LemA Atu0641 3c57bbb80f65579aa00ac52364bf853e 183 SUPERFAMILY SSF140478 22 171 8.37E-54 T 14-10-2018 IPR023353 LemA-like domain superfamily Atu2722 7537a949e4d271fd2217b0970e217880 220 Pfam PF00691 OmpA family 114 209 1.3E-21 T 14-10-2018 IPR006665 OmpA-like domain Atu2722 7537a949e4d271fd2217b0970e217880 220 SUPERFAMILY SSF103088 102 217 5.62E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu2722 7537a949e4d271fd2217b0970e217880 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 218 1.1E-7 T 14-10-2018 Atu2722 7537a949e4d271fd2217b0970e217880 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 160 177 1.1E-7 T 14-10-2018 Atu2722 7537a949e4d271fd2217b0970e217880 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 178 197 1.1E-7 T 14-10-2018 Atu2722 7537a949e4d271fd2217b0970e217880 220 PRINTS PR01021 OMPA domain signature 115 137 7.2E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu2722 7537a949e4d271fd2217b0970e217880 220 PRINTS PR01021 OMPA domain signature 145 160 7.2E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu2722 7537a949e4d271fd2217b0970e217880 220 PRINTS PR01021 OMPA domain signature 160 176 7.2E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Atu2722 7537a949e4d271fd2217b0970e217880 220 Pfam PF13488 Glycine zipper 36 83 1.0E-8 T 14-10-2018 IPR039567 Glycine zipper domain Atu2722 7537a949e4d271fd2217b0970e217880 220 Gene3D G3DSA:3.30.1330.60 78 219 6.7E-48 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu2708 66ce491033263d00b5153798549033f0 425 SUPERFAMILY SSF103473 4 417 3.53E-83 T 14-10-2018 IPR036259 MFS transporter superfamily Atu2708 66ce491033263d00b5153798549033f0 425 Pfam PF07690 Major Facilitator Superfamily 20 379 1.1E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2708 66ce491033263d00b5153798549033f0 425 Gene3D G3DSA:1.20.1250.20 5 210 5.8E-47 T 14-10-2018 Atu2708 66ce491033263d00b5153798549033f0 425 Gene3D G3DSA:1.20.1250.20 233 421 2.4E-22 T 14-10-2018 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 PRINTS PR01035 Tetracycline resistance protein signature 22 38 4.8E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 PRINTS PR01035 Tetracycline resistance protein signature 142 164 4.8E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 Gene3D G3DSA:1.20.1250.20 269 499 1.2E-13 T 14-10-2018 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 Pfam PF07690 Major Facilitator Superfamily 21 412 3.4E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 Gene3D G3DSA:1.20.1720.10 16 251 8.1E-42 T 14-10-2018 Atu3988 424deb1d242b6d80cb393a16f5ed97ff 506 SUPERFAMILY SSF103473 12 497 1.29E-59 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0852 28cbadb7ade385e73981c7583e248450 148 SMART SM00347 37 137 3.4E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0852 28cbadb7ade385e73981c7583e248450 148 Pfam PF01047 MarR family 44 100 1.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0852 28cbadb7ade385e73981c7583e248450 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 2.1E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0852 28cbadb7ade385e73981c7583e248450 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 2.1E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0852 28cbadb7ade385e73981c7583e248450 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 2.1E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0852 28cbadb7ade385e73981c7583e248450 148 SUPERFAMILY SSF46785 13 140 9.0E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0852 28cbadb7ade385e73981c7583e248450 148 Gene3D G3DSA:1.10.10.10 15 148 1.2E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2528 200911de2b133123f3a6c651d995a69a 351 SUPERFAMILY SSF56796 6 348 1.83E-83 T 14-10-2018 Atu2528 200911de2b133123f3a6c651d995a69a 351 Gene3D G3DSA:3.40.50.1970 1 160 1.6E-45 T 14-10-2018 Atu2528 200911de2b133123f3a6c651d995a69a 351 Gene3D G3DSA:1.20.1090.10 161 351 1.9E-63 T 14-10-2018 Atu2528 200911de2b133123f3a6c651d995a69a 351 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 333 3.8E-69 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Atu2389 0da653a3a0d285d30069ed4903edda64 291 SUPERFAMILY SSF161098 86 270 1.14E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu2389 0da653a3a0d285d30069ed4903edda64 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 286 8.0E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2389 0da653a3a0d285d30069ed4903edda64 291 Gene3D G3DSA:1.10.3720.10 84 284 1.3E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 SMART SM00487 21 221 4.5E-66 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 Gene3D G3DSA:3.40.50.300 213 468 7.8E-52 T 14-10-2018 Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 Gene3D G3DSA:3.40.50.300 1 210 3.2E-79 T 14-10-2018 Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 Pfam PF00271 Helicase conserved C-terminal domain 234 342 2.9E-29 T 14-10-2018 IPR001650 Helicase, C-terminal Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 Pfam PF00270 DEAD/DEAH box helicase 26 195 3.0E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 SMART SM00490 258 342 3.2E-30 T 14-10-2018 IPR001650 Helicase, C-terminal Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Atu1833 45dbd34bafeb85b1a4b91d6b2310ff84 503 SUPERFAMILY SSF52540 74 363 6.17E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2834 302638565b52941eb493314a1e46ec37 165 Pfam PF03653 Uncharacterised protein family (UPF0093) 24 164 2.3E-56 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 Atu2834 302638565b52941eb493314a1e46ec37 165 PIRSF PIRSF004638 19 165 2.1E-62 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 Atu2834 302638565b52941eb493314a1e46ec37 165 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 26 164 1.7E-48 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 Atu4539 c44752b18b797b3840870ed07c6d9e6d 206 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 11 206 3.7E-73 T 14-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 Atu4539 c44752b18b797b3840870ed07c6d9e6d 206 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 56 84 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Atu4539 c44752b18b797b3840870ed07c6d9e6d 206 Gene3D G3DSA:2.60.130.10 3 206 2.0E-70 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Atu4539 c44752b18b797b3840870ed07c6d9e6d 206 SUPERFAMILY SSF49482 5 206 3.53E-57 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Atu4539 c44752b18b797b3840870ed07c6d9e6d 206 Pfam PF00775 Dioxygenase 46 197 2.1E-19 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Atu0276 cc6248503ba6ae45424166bf2e17a294 115 Pfam PF03960 ArsC family 6 112 1.9E-17 T 14-10-2018 IPR006660 Arsenate reductase-like Atu0276 cc6248503ba6ae45424166bf2e17a294 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 112 1.2E-30 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Atu0276 cc6248503ba6ae45424166bf2e17a294 115 SUPERFAMILY SSF52833 2 114 4.04E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0276 cc6248503ba6ae45424166bf2e17a294 115 Gene3D G3DSA:3.40.30.10 2 115 2.8E-44 T 14-10-2018 Atu2208 08eca2a16598ae310cc92cd1a35287e3 113 SUPERFAMILY SSF50249 5 112 6.86E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu2208 08eca2a16598ae310cc92cd1a35287e3 113 Gene3D G3DSA:2.40.50.140 1 113 3.8E-33 T 14-10-2018 Atu2208 08eca2a16598ae310cc92cd1a35287e3 113 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 7 112 3.6E-47 T 14-10-2018 IPR008231 Probable chaperone CsaA Atu2208 08eca2a16598ae310cc92cd1a35287e3 113 Pfam PF01588 Putative tRNA binding domain 15 111 5.0E-12 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Atu0819 a6d448daedc8f1eb4331f606b86c82ae 146 Pfam PF02082 Transcriptional regulator 1 82 1.2E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu0819 a6d448daedc8f1eb4331f606b86c82ae 146 Gene3D G3DSA:1.10.10.10 1 142 1.3E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0819 a6d448daedc8f1eb4331f606b86c82ae 146 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 135 2.9E-36 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Atu0819 a6d448daedc8f1eb4331f606b86c82ae 146 SUPERFAMILY SSF46785 1 138 6.99E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4042 8827a1d3c9d629bf5d66f6fb96d26b4f 158 Gene3D G3DSA:3.30.230.30 1 87 1.2E-34 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily Atu4042 8827a1d3c9d629bf5d66f6fb96d26b4f 158 Pfam PF09186 Domain of unknown function (DUF1949) 94 151 3.2E-11 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Atu4042 8827a1d3c9d629bf5d66f6fb96d26b4f 158 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 33 62 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Atu4042 8827a1d3c9d629bf5d66f6fb96d26b4f 158 SUPERFAMILY SSF54211 4 82 7.21E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu4042 8827a1d3c9d629bf5d66f6fb96d26b4f 158 Pfam PF01205 Uncharacterized protein family UPF0029 3 78 3.8E-22 T 14-10-2018 IPR001498 Impact, N-terminal Atu4042 8827a1d3c9d629bf5d66f6fb96d26b4f 158 SUPERFAMILY SSF54980 90 156 3.02E-7 T 14-10-2018 IPR035647 EF-G domain III/V-like Atu2424 79ebae60bb76c3df1deae16ff3e24d6a 242 Pfam PF00005 ABC transporter 23 166 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2424 79ebae60bb76c3df1deae16ff3e24d6a 242 SMART SM00382 31 218 1.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2424 79ebae60bb76c3df1deae16ff3e24d6a 242 PIRSF PIRSF039137 2 240 1.1E-103 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Atu2424 79ebae60bb76c3df1deae16ff3e24d6a 242 SUPERFAMILY SSF52540 4 237 4.98E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2424 79ebae60bb76c3df1deae16ff3e24d6a 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2424 79ebae60bb76c3df1deae16ff3e24d6a 242 Gene3D G3DSA:3.40.50.300 2 240 3.5E-61 T 14-10-2018 Atu1795 472e0f8b62ca78112b5f00e4e1d7995b 312 Pfam PF03547 Membrane transport protein 162 303 6.1E-18 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Atu1795 472e0f8b62ca78112b5f00e4e1d7995b 312 Pfam PF03547 Membrane transport protein 6 116 6.9E-8 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Atu4431 5d7e1758a5ae6b97cc1ce1b16c24ee8c 545 SUPERFAMILY SSF53850 31 540 1.35E-111 T 14-10-2018 Atu4431 5d7e1758a5ae6b97cc1ce1b16c24ee8c 545 Gene3D G3DSA:3.90.76.10 48 223 3.3E-111 T 14-10-2018 Atu4431 5d7e1758a5ae6b97cc1ce1b16c24ee8c 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 457 1.7E-87 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4431 5d7e1758a5ae6b97cc1ce1b16c24ee8c 545 Gene3D G3DSA:3.40.190.10 224 533 3.3E-111 T 14-10-2018 Atu4431 5d7e1758a5ae6b97cc1ce1b16c24ee8c 545 Gene3D G3DSA:3.10.105.10 303 521 3.3E-111 T 14-10-2018 Atu4431 5d7e1758a5ae6b97cc1ce1b16c24ee8c 545 PIRSF PIRSF002741 10 543 1.5E-80 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu8149 48ca2fef0cbf51d8f9c6505a5148c425 111 SUPERFAMILY SSF141371 10 99 3.53E-10 T 14-10-2018 Atu8149 48ca2fef0cbf51d8f9c6505a5148c425 111 Pfam PF07238 PilZ domain 10 97 2.0E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 Atu8149 48ca2fef0cbf51d8f9c6505a5148c425 111 Gene3D G3DSA:2.40.10.220 6 104 4.6E-6 T 14-10-2018 Atu1900 0c21cbb88280c0621dc0a53e53b72b0c 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 316 2.6E-50 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu8193 718976d82c9bd74a1dac35813363cc1b 96 Pfam PF07235 Protein of unknown function (DUF1427) 2 81 2.8E-38 T 14-10-2018 IPR009872 Protein of unknown function DUF1427 Atu8193 718976d82c9bd74a1dac35813363cc1b 96 TIGRFAM TIGR03510 XapX: XapX domain 4 50 1.6E-20 T 14-10-2018 IPR020017 XapX domain Atu2214 567580d26ca0ba7e2eca259badac739b 366 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 62 296 9.1E-67 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Atu2214 567580d26ca0ba7e2eca259badac739b 366 SUPERFAMILY SSF53335 3 357 5.82E-107 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2214 567580d26ca0ba7e2eca259badac739b 366 Gene3D G3DSA:3.40.50.12710 1 363 1.8E-106 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Atu1705 2d07cf05b822ae0127e16c77ce1d5053 246 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.0E-31 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Atu1705 2d07cf05b822ae0127e16c77ce1d5053 246 Pfam PF02416 mttA/Hcf106 family 4 41 3.8E-7 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Atu1705 2d07cf05b822ae0127e16c77ce1d5053 246 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 9.0E-12 T 14-10-2018 Atu1705 2d07cf05b822ae0127e16c77ce1d5053 246 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 9.0E-12 T 14-10-2018 Atu1705 2d07cf05b822ae0127e16c77ce1d5053 246 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 9.0E-12 T 14-10-2018 Atu1705 2d07cf05b822ae0127e16c77ce1d5053 246 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 184 19.001 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 Gene3D G3DSA:3.30.200.20 3 92 3.0E-25 T 14-10-2018 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 SUPERFAMILY SSF56104 9 292 1.14E-90 T 14-10-2018 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 289 22.705 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 Gene3D G3DSA:3.30.470.20 93 241 8.3E-51 T 14-10-2018 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 Pfam PF01259 SAICAR synthetase 15 266 1.3E-81 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 ProSitePatterns PS01057 SAICAR synthetase signature 1. 91 105 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu2548 7d99837030a1b7961bb46c7a8a6a282d 316 ProSitePatterns PS01058 SAICAR synthetase signature 2. 197 205 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Atu6186 4f8e5a5194125776e4d19b2f29dc3d9d 188 Pfam PF06661 VirE3 60 100 5.2E-7 T 14-10-2018 IPR009550 VirE3 Atu0898 e1a5cba9a51a285f78c6f343f16d1f61 133 Pfam PF06059 Domain of Unknown Function (DUF930) 34 131 4.0E-38 T 14-10-2018 IPR009273 Protein of unknown function DUF930 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 Gene3D G3DSA:1.10.540.10 10 125 1.2E-16 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 SUPERFAMILY SSF47203 235 374 1.69E-13 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 Gene3D G3DSA:1.20.140.10 226 399 1.2E-53 T 14-10-2018 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 Gene3D G3DSA:2.40.110.10 126 225 1.1E-24 T 14-10-2018 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 241 374 2.0E-13 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 PIRSF PIRSF016578 4 382 4.3E-24 T 14-10-2018 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 SUPERFAMILY SSF56645 24 222 1.57E-36 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu6072 776b5aba58b35a3b80391b4a21bc35a0 404 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 28 103 1.9E-5 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu1785 b79f177e2ebc9ef17f6e7e4f9003545e 167 Pfam PF13508 Acetyltransferase (GNAT) domain 49 128 1.2E-6 T 14-10-2018 IPR000182 GNAT domain Atu1785 b79f177e2ebc9ef17f6e7e4f9003545e 167 Gene3D G3DSA:3.40.630.30 1 164 5.1E-43 T 14-10-2018 Atu1785 b79f177e2ebc9ef17f6e7e4f9003545e 167 SUPERFAMILY SSF55729 1 161 1.92E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3830 07186e5545c1111b0e88c3d36305d6e9 418 Gene3D G3DSA:1.20.1250.20 219 409 1.6E-18 T 14-10-2018 Atu3830 07186e5545c1111b0e88c3d36305d6e9 418 Gene3D G3DSA:1.20.1250.20 19 205 6.4E-25 T 14-10-2018 Atu3830 07186e5545c1111b0e88c3d36305d6e9 418 SUPERFAMILY SSF103473 12 411 2.35E-54 T 14-10-2018 IPR036259 MFS transporter superfamily Atu3830 07186e5545c1111b0e88c3d36305d6e9 418 Pfam PF07690 Major Facilitator Superfamily 35 373 4.6E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1039 c725b58b31b1fa6742de594f47509fe6 254 Hamap MF_00201 DNA repair protein RecO [recO]. 1 237 17.208 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Atu1039 c725b58b31b1fa6742de594f47509fe6 254 SUPERFAMILY SSF57863 88 216 1.02E-13 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Atu1039 c725b58b31b1fa6742de594f47509fe6 254 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 223 5.1E-40 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Atu1039 c725b58b31b1fa6742de594f47509fe6 254 SUPERFAMILY SSF50249 1 67 1.63E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1039 c725b58b31b1fa6742de594f47509fe6 254 Pfam PF02565 Recombination protein O C terminal 85 222 1.0E-29 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Atu1039 c725b58b31b1fa6742de594f47509fe6 254 Gene3D G3DSA:2.40.50.140 1 67 1.7E-5 T 14-10-2018 Atu1039 c725b58b31b1fa6742de594f47509fe6 254 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 131 219 1.0E-45 T 14-10-2018 Atu1039 c725b58b31b1fa6742de594f47509fe6 254 Pfam PF11967 Recombination protein O N terminal 1 70 2.5E-15 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Atu1039 c725b58b31b1fa6742de594f47509fe6 254 Gene3D G3DSA:1.20.1440.120 96 225 1.5E-10 T 14-10-2018 Atu4662 424d5ac7cca511269db14567dec0ead8 335 SUPERFAMILY SSF161098 103 313 2.22E-16 T 14-10-2018 IPR035906 MetI-like superfamily Atu4662 424d5ac7cca511269db14567dec0ead8 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 330 1.3E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4662 424d5ac7cca511269db14567dec0ead8 335 Gene3D G3DSA:1.10.3720.10 90 331 1.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu0097 9111f093782240a7e622fa038bf5ccee 134 SUPERFAMILY SSF54197 11 134 1.48E-32 T 14-10-2018 IPR036265 HIT-like superfamily Atu0097 9111f093782240a7e622fa038bf5ccee 134 Pfam PF01230 HIT domain 13 100 1.9E-15 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Atu0097 9111f093782240a7e622fa038bf5ccee 134 Gene3D G3DSA:3.30.428.10 2 134 5.7E-39 T 14-10-2018 IPR036265 HIT-like superfamily Atu0097 9111f093782240a7e622fa038bf5ccee 134 PIRSF PIRSF000714 3 134 1.3E-46 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type Atu1177 5feb82d638578c533119443d981bb2c9 187 Pfam PF02620 Uncharacterized ACR, COG1399 70 183 1.2E-13 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 SUPERFAMILY SSF47413 9 56 1.3E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 Gene3D G3DSA:3.40.50.2300 171 301 3.9E-55 T 14-10-2018 Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 SUPERFAMILY SSF53822 87 341 3.44E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 Pfam PF13377 Periplasmic binding protein-like domain 181 339 2.4E-41 T 14-10-2018 Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 SMART SM00354 9 82 3.9E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 53 5.0E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 Gene3D G3DSA:3.40.50.2300 88 318 3.9E-55 T 14-10-2018 Atu3107 fc4154a8f217fd95dafd23205ae1ac32 353 Gene3D G3DSA:1.10.260.40 6 53 1.2E-14 T 14-10-2018 Atu3239 965c4dc23afe4ecd21fe0f41e953579e 433 Pfam PF13416 Bacterial extracellular solute-binding protein 55 369 6.7E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3239 965c4dc23afe4ecd21fe0f41e953579e 433 Gene3D G3DSA:3.40.190.10 154 425 1.7E-93 T 14-10-2018 Atu3239 965c4dc23afe4ecd21fe0f41e953579e 433 SUPERFAMILY SSF53850 35 430 2.22E-63 T 14-10-2018 Atu3239 965c4dc23afe4ecd21fe0f41e953579e 433 Gene3D G3DSA:3.40.190.10 52 391 1.7E-93 T 14-10-2018 Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 SUPERFAMILY SSF54593 278 621 9.14E-63 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 Gene3D G3DSA:3.10.180.10 435 625 1.8E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 287 423 2.2E-28 T 14-10-2018 Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 Gene3D G3DSA:3.20.20.150 1 270 2.5E-72 T 14-10-2018 Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 SUPERFAMILY SSF51658 1 271 8.15E-78 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 Gene3D G3DSA:3.10.180.10 281 434 7.9E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu4529 0ca784fae20c1e338d3e8a29da1c1ff6 633 Pfam PF01261 Xylose isomerase-like TIM barrel 18 218 9.1E-38 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu2464 ba01aab553c9522f34507b96274c3bab 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 2.7E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 2.7E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 2.7E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 2.7E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 2.7E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 2.7E-51 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 SUPERFAMILY SSF53328 86 282 8.11E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu2464 ba01aab553c9522f34507b96274c3bab 294 Gene3D G3DSA:3.30.70.260 1 83 1.3E-25 T 14-10-2018 Atu2464 ba01aab553c9522f34507b96274c3bab 294 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 281 2.4E-99 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 Pfam PF00551 Formyl transferase 86 263 1.6E-37 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu2464 ba01aab553c9522f34507b96274c3bab 294 PIRSF PIRSF036480 1 282 2.2E-111 T 14-10-2018 Atu2464 ba01aab553c9522f34507b96274c3bab 294 SUPERFAMILY SSF55021 4 77 1.21E-15 T 14-10-2018 Atu2464 ba01aab553c9522f34507b96274c3bab 294 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 281 46.728 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Atu2464 ba01aab553c9522f34507b96274c3bab 294 Gene3D G3DSA:3.40.50.170 86 282 5.4E-68 T 14-10-2018 Atu1350 acb91a562e17f35796eca80e786b4bde 106 PRINTS PR00355 Adrenodoxin signature 59 73 1.9E-8 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atu1350 acb91a562e17f35796eca80e786b4bde 106 PRINTS PR00355 Adrenodoxin signature 82 90 1.9E-8 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atu1350 acb91a562e17f35796eca80e786b4bde 106 PRINTS PR00355 Adrenodoxin signature 40 50 1.9E-8 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atu1350 acb91a562e17f35796eca80e786b4bde 106 Gene3D G3DSA:3.10.20.30 1 106 1.9E-37 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Atu1350 acb91a562e17f35796eca80e786b4bde 106 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Atu1350 acb91a562e17f35796eca80e786b4bde 106 SUPERFAMILY SSF54292 3 104 1.52E-33 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Atu1350 acb91a562e17f35796eca80e786b4bde 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 90 2.6E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Atu2068 90ae0aab909d5a228d1e150f73fab73a 240 Pfam PF03591 AzlC protein 15 155 2.6E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease Atu3786 5d6186cdec85f6e660d71878c2072540 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 5.9E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu3786 5d6186cdec85f6e660d71878c2072540 229 SMART SM00448 6 117 1.6E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3786 5d6186cdec85f6e660d71878c2072540 229 Gene3D G3DSA:1.10.10.10 132 229 3.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3786 5d6186cdec85f6e660d71878c2072540 229 Pfam PF00072 Response regulator receiver domain 8 118 3.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu3786 5d6186cdec85f6e660d71878c2072540 229 SMART SM00862 152 226 2.3E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu3786 5d6186cdec85f6e660d71878c2072540 229 SUPERFAMILY SSF52172 6 185 2.7E-41 T 14-10-2018 IPR011006 CheY-like superfamily Atu3786 5d6186cdec85f6e660d71878c2072540 229 Gene3D G3DSA:3.40.50.2300 2 131 4.5E-36 T 14-10-2018 Atu1076 906855634ae222d945aa938bacb022cc 195 Pfam PF02674 Colicin V production protein 6 148 1.0E-28 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Atu1164 fbdcecb5c2527a40953e0b11f848397e 443 SUPERFAMILY SSF47090 99 176 5.49E-16 T 14-10-2018 IPR036365 PGBD-like superfamily Atu1164 fbdcecb5c2527a40953e0b11f848397e 443 Pfam PF01471 Putative peptidoglycan binding domain 111 168 1.1E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu1164 fbdcecb5c2527a40953e0b11f848397e 443 Pfam PF03734 L,D-transpeptidase catalytic domain 196 363 1.7E-21 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu1164 fbdcecb5c2527a40953e0b11f848397e 443 SUPERFAMILY SSF141523 193 360 5.89E-14 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2786 47a3d9db0090c26863b952b6136e4979 146 SUPERFAMILY SSF55486 14 135 6.39E-33 T 14-10-2018 Atu2786 47a3d9db0090c26863b952b6136e4979 146 Gene3D G3DSA:3.30.2010.20 16 136 6.3E-30 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily Atu2786 47a3d9db0090c26863b952b6136e4979 146 Pfam PF06262 Zincin-like metallopeptidase 42 135 5.9E-32 T 14-10-2018 IPR010428 Zincin-like metallopeptidase Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 Gene3D G3DSA:3.30.590.10 100 434 3.8E-107 T 14-10-2018 Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 6 434 3.0E-203 T 14-10-2018 IPR017536 Glutamine synthetase, type III Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 SMART SM01230 97 349 5.5E-109 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 SUPERFAMILY SSF54368 4 93 1.29E-20 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 Gene3D G3DSA:3.10.20.70 2 98 5.0E-9 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 Pfam PF00120 Glutamine synthetase, catalytic domain 98 430 9.6E-107 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 225 240 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Atu4230 42aa8de6ea272f884b1d5ee4983ac939 435 SUPERFAMILY SSF55931 98 434 4.22E-102 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Atu4150 ba96ee41fec593609ffcb903515d5e6b 295 SUPERFAMILY SSF103481 39 140 2.22E-13 T 14-10-2018 Atu4150 ba96ee41fec593609ffcb903515d5e6b 295 SUPERFAMILY SSF103481 179 278 5.89E-10 T 14-10-2018 Atu4150 ba96ee41fec593609ffcb903515d5e6b 295 Pfam PF00892 EamA-like transporter family 3 136 5.0E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu3717 9a8ee03ee0e3126f231e03871922bfb0 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 86 214 9.4E-38 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Atu3717 9a8ee03ee0e3126f231e03871922bfb0 239 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 13 231 39.688 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Atu3717 9a8ee03ee0e3126f231e03871922bfb0 239 TIGRFAM TIGR02796 tolQ: protein TolQ 14 226 8.4E-85 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Atu4247 8a23d04437cb4787d86deef70b465efd 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu4247 8a23d04437cb4787d86deef70b465efd 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 476 3.5E-210 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 Atu4247 8a23d04437cb4787d86deef70b465efd 484 Gene3D G3DSA:3.40.309.10 261 450 2.9E-179 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu4247 8a23d04437cb4787d86deef70b465efd 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu4247 8a23d04437cb4787d86deef70b465efd 484 SUPERFAMILY SSF53720 8 481 5.5E-167 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu4247 8a23d04437cb4787d86deef70b465efd 484 Pfam PF00171 Aldehyde dehydrogenase family 23 478 8.5E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu4247 8a23d04437cb4787d86deef70b465efd 484 Gene3D G3DSA:3.40.605.10 19 473 2.9E-179 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu3180 43f8bbd9fa279b4f2087f82fff904b37 277 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3180 43f8bbd9fa279b4f2087f82fff904b37 277 SUPERFAMILY SSF52540 3 231 5.23E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3180 43f8bbd9fa279b4f2087f82fff904b37 277 Gene3D G3DSA:3.40.50.300 4 238 1.0E-50 T 14-10-2018 Atu3180 43f8bbd9fa279b4f2087f82fff904b37 277 SMART SM00382 30 209 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3180 43f8bbd9fa279b4f2087f82fff904b37 277 Pfam PF00005 ABC transporter 23 161 1.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 96 417 2.1E-117 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 Gene3D G3DSA:3.30.300.10 130 409 6.1E-147 T 14-10-2018 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 Gene3D G3DSA:3.30.300.10 6 265 6.1E-147 T 14-10-2018 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 291 299 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 265 407 2.9E-65 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 SUPERFAMILY SSF55973 140 264 9.42E-39 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 PIRSF PIRSF000497 1 419 6.5E-145 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 Gene3D G3DSA:3.30.300.10 12 302 6.1E-147 T 14-10-2018 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 146 156 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 129 1.5E-32 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 Pfam PF02772 S-adenosylmethionine synthetase, central domain 145 263 1.4E-34 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 SUPERFAMILY SSF55973 265 417 1.33E-64 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu0362 1dd254c546ed6c29a0f3b1bc2133a2a3 420 SUPERFAMILY SSF55973 4 137 5.49E-30 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Atu1680 01e47876de9634ee276ae972d462fc29 189 SUPERFAMILY SSF50891 17 185 3.36E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu1680 01e47876de9634ee276ae972d462fc29 189 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Atu1680 01e47876de9634ee276ae972d462fc29 189 Gene3D G3DSA:2.40.100.10 16 186 1.4E-43 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Atu1680 01e47876de9634ee276ae972d462fc29 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 1.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1680 01e47876de9634ee276ae972d462fc29 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 1.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1680 01e47876de9634ee276ae972d462fc29 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 1.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1680 01e47876de9634ee276ae972d462fc29 189 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 1.9E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu1680 01e47876de9634ee276ae972d462fc29 189 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 185 2.7E-45 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Atu5414 58f70d2bd2d5be370e4f05aee91a3460 474 SUPERFAMILY SSF53092 29 191 2.43E-7 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu5414 58f70d2bd2d5be370e4f05aee91a3460 474 SUPERFAMILY SSF55920 195 468 1.41E-37 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Atu5414 58f70d2bd2d5be370e4f05aee91a3460 474 Gene3D G3DSA:3.40.350.10 30 193 5.9E-6 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Atu5414 58f70d2bd2d5be370e4f05aee91a3460 474 Pfam PF00557 Metallopeptidase family M24 202 453 3.2E-34 T 14-10-2018 IPR000994 Peptidase M24 Atu4625 7ff26df912f9b71691c7d0864a006312 326 Gene3D G3DSA:3.20.20.150 8 325 1.6E-83 T 14-10-2018 Atu4625 7ff26df912f9b71691c7d0864a006312 326 SUPERFAMILY SSF51658 8 302 3.65E-33 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4625 7ff26df912f9b71691c7d0864a006312 326 Pfam PF03786 D-mannonate dehydratase (UxuA) 148 301 2.4E-34 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu4625 7ff26df912f9b71691c7d0864a006312 326 Pfam PF03786 D-mannonate dehydratase (UxuA) 20 135 3.7E-5 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3248 5ddcdcf71f56a35f11739d1975ef6850 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 266 3.8E-105 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Atu3248 5ddcdcf71f56a35f11739d1975ef6850 271 PIRSF PIRSF003092 1 270 2.0E-83 T 14-10-2018 IPR025501 ATP binding protein MinD Atu3248 5ddcdcf71f56a35f11739d1975ef6850 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 225 9.9E-20 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Atu3248 5ddcdcf71f56a35f11739d1975ef6850 271 SUPERFAMILY SSF52540 1 252 6.88E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3248 5ddcdcf71f56a35f11739d1975ef6850 271 Gene3D G3DSA:3.40.50.300 1 252 1.6E-64 T 14-10-2018 Atu4819 81ff7724d3c037231555ccbdab696060 124 Pfam PF03479 Domain of unknown function (DUF296) 3 114 1.8E-12 T 14-10-2018 IPR005175 PPC domain Atu4819 81ff7724d3c037231555ccbdab696060 124 Gene3D G3DSA:3.30.1330.80 1 122 3.1E-14 T 14-10-2018 Atu4819 81ff7724d3c037231555ccbdab696060 124 SUPERFAMILY SSF117856 2 117 6.8E-18 T 14-10-2018 Atu1820 c5100c471cabcb223e616700a163e5be 127 Gene3D G3DSA:3.30.300.130 25 127 9.0E-35 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atu1820 c5100c471cabcb223e616700a163e5be 127 Pfam PF01883 Iron-sulfur cluster assembly protein 32 103 3.6E-21 T 14-10-2018 IPR002744 MIP18 family-like Atu1820 c5100c471cabcb223e616700a163e5be 127 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 30 126 9.0E-46 T 14-10-2018 IPR014291 SUF system FeS cluster assembly associated Atu1820 c5100c471cabcb223e616700a163e5be 127 SUPERFAMILY SSF117916 31 125 1.47E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Atu1793 b6130588a0b847d1e7a63f207af1ef77 241 PIRSF PIRSF000851 4 241 2.6E-89 T 14-10-2018 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 Atu1713 22142306baf1a4dc3ff18addbcb3ead7 110 Gene3D G3DSA:2.60.300.12 5 110 7.0E-36 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atu1713 22142306baf1a4dc3ff18addbcb3ead7 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 109 3.2E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Atu1713 22142306baf1a4dc3ff18addbcb3ead7 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Atu1713 22142306baf1a4dc3ff18addbcb3ead7 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 6 105 8.6E-20 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Atu1713 22142306baf1a4dc3ff18addbcb3ead7 110 SUPERFAMILY SSF89360 6 98 3.66E-30 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Atu1232 c1849a6e02199264c64f23e0a5d13f2c 178 Pfam PF06897 Protein of unknown function (DUF1269) 65 166 3.0E-36 T 14-10-2018 IPR009200 Protein of unknown function DUF1269, membrane associated Atu1069 f2fa4843fe9382237d1a53567698426d 318 PIRSF PIRSF006431 3 318 2.4E-135 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Atu1069 f2fa4843fe9382237d1a53567698426d 318 Pfam PF00561 alpha/beta hydrolase fold 42 299 1.0E-29 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1069 f2fa4843fe9382237d1a53567698426d 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 315 1.0E-119 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Atu1069 f2fa4843fe9382237d1a53567698426d 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 67 78 3.3E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Atu1069 f2fa4843fe9382237d1a53567698426d 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 41 49 3.3E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Atu1069 f2fa4843fe9382237d1a53567698426d 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 110 124 3.3E-14 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Atu1069 f2fa4843fe9382237d1a53567698426d 318 SUPERFAMILY SSF53474 9 302 8.65E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1069 f2fa4843fe9382237d1a53567698426d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1069 f2fa4843fe9382237d1a53567698426d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1069 f2fa4843fe9382237d1a53567698426d 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 1.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1069 f2fa4843fe9382237d1a53567698426d 318 Gene3D G3DSA:3.40.50.1820 2 318 3.1E-102 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 8 270 32.379 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 Gene3D G3DSA:3.40.140.10 120 271 2.1E-47 T 14-10-2018 Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 Pfam PF02634 FdhD/NarQ family 32 269 9.5E-75 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 SUPERFAMILY SSF53927 11 270 1.5E-74 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 PIRSF PIRSF015626 1 271 7.8E-78 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 29 270 2.5E-61 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Atu2619 0e34c729ff3277445986a3bcefa7a90c 271 Gene3D G3DSA:3.10.20.10 33 116 2.1E-8 T 14-10-2018 Atu1175 d906620ea33c6063969ed80a8b035d36 177 Pfam PF04355 SmpA / OmlA family 48 122 1.8E-18 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Atu1175 d906620ea33c6063969ed80a8b035d36 177 Gene3D G3DSA:3.30.1450.10 47 136 3.3E-9 T 14-10-2018 IPR037873 BamE-like Atu5147 4376c2387f564be74d9c50e0856b865d 194 PRINTS PR01837 MgtC/SapB protein signature 79 97 5.0E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu5147 4376c2387f564be74d9c50e0856b865d 194 PRINTS PR01837 MgtC/SapB protein signature 106 128 5.0E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu5147 4376c2387f564be74d9c50e0856b865d 194 PRINTS PR01837 MgtC/SapB protein signature 135 159 5.0E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu5147 4376c2387f564be74d9c50e0856b865d 194 PRINTS PR01837 MgtC/SapB protein signature 60 79 5.0E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu5147 4376c2387f564be74d9c50e0856b865d 194 Pfam PF02308 MgtC family 57 178 2.9E-36 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Atu3272 2f7d5015a1a77be384fbefa7032b0eb9 398 Pfam PF02563 Polysaccharide biosynthesis/export protein 89 171 5.3E-13 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Atu3272 2f7d5015a1a77be384fbefa7032b0eb9 398 Gene3D G3DSA:3.30.1950.10 90 177 1.4E-60 T 14-10-2018 Atu3272 2f7d5015a1a77be384fbefa7032b0eb9 398 Gene3D G3DSA:3.10.560.10 260 359 1.4E-60 T 14-10-2018 Atu3272 2f7d5015a1a77be384fbefa7032b0eb9 398 Gene3D G3DSA:3.10.560.10 89 259 1.4E-60 T 14-10-2018 Atu3269 860b8505c251754587470214da19a468 508 Gene3D G3DSA:3.10.105.10 271 477 9.8E-28 T 14-10-2018 Atu3269 860b8505c251754587470214da19a468 508 PIRSF PIRSF002741 5 505 1.2E-77 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3269 860b8505c251754587470214da19a468 508 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 431 1.6E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3269 860b8505c251754587470214da19a468 508 SUPERFAMILY SSF53850 23 506 3.07E-106 T 14-10-2018 Atu3269 860b8505c251754587470214da19a468 508 Gene3D G3DSA:3.40.190.10 11 270 1.5E-64 T 14-10-2018 Atu5313 4c5147049b6387a465334fa5d93716af 268 Pfam PF04954 Siderophore-interacting protein 143 264 1.1E-26 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Atu5313 4c5147049b6387a465334fa5d93716af 268 Gene3D G3DSA:2.40.30.10 3 135 1.9E-27 T 14-10-2018 Atu5313 4c5147049b6387a465334fa5d93716af 268 Pfam PF08021 Siderophore-interacting FAD-binding domain 19 135 5.8E-32 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Atu5313 4c5147049b6387a465334fa5d93716af 268 Gene3D G3DSA:3.40.50.80 138 268 2.7E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Atu5313 4c5147049b6387a465334fa5d93716af 268 SUPERFAMILY SSF63380 14 140 6.45E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Atu0836 e96a75851332065b7ba6289f07a04588 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 204 2.7E-14 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal Atu0836 e96a75851332065b7ba6289f07a04588 219 SUPERFAMILY SSF52833 2 89 3.34E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0836 e96a75851332065b7ba6289f07a04588 219 Gene3D G3DSA:3.40.30.10 1 92 1.2E-24 T 14-10-2018 Atu0836 e96a75851332065b7ba6289f07a04588 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 85 3.1E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu0836 e96a75851332065b7ba6289f07a04588 219 Gene3D G3DSA:1.20.1050.10 93 217 3.5E-38 T 14-10-2018 Atu0836 e96a75851332065b7ba6289f07a04588 219 SUPERFAMILY SSF47616 82 214 1.14E-27 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 SUPERFAMILY SSF53448 117 396 1.04E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 Pfam PF13632 Glycosyl transferase family group 2 204 408 3.2E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 PRINTS PR01439 Cellulose synthase subunit A signature 127 146 3.1E-5 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 PRINTS PR01439 Cellulose synthase subunit A signature 38 58 3.1E-5 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 PRINTS PR01439 Cellulose synthase subunit A signature 514 535 3.1E-5 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 PRINTS PR01439 Cellulose synthase subunit A signature 210 234 3.1E-5 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu3056 a23a5334145121a51b1a99a8fe7ea1ab 654 Gene3D G3DSA:3.90.550.10 112 330 6.8E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4163 1d734f931786beda3b0047a0a271ae52 329 Pfam PF07536 HWE histidine kinase 139 220 4.3E-25 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu4163 1d734f931786beda3b0047a0a271ae52 329 SMART SM00911 139 221 2.3E-31 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 242 9.0E-69 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 SUPERFAMILY SSF53067 244 480 5.99E-57 T 14-10-2018 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 PIRSF PIRSF000538 1 484 3.0E-128 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 127 139 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 476 1.2E-178 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 Gene3D G3DSA:3.30.420.40 244 483 1.0E-70 T 14-10-2018 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 Gene3D G3DSA:3.30.420.40 1 243 1.2E-80 T 14-10-2018 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 SUPERFAMILY SSF53067 2 244 9.26E-72 T 14-10-2018 Atu4482 f691a656034e4f7c612fa5cb52abbeeb 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 251 436 4.8E-32 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Atu4391 f5832144c08482f1b362e6bd5c36ef27 177 Pfam PF00510 Cytochrome c oxidase subunit III 51 176 2.6E-11 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4391 f5832144c08482f1b362e6bd5c36ef27 177 SUPERFAMILY SSF81452 9 176 1.19E-33 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4391 f5832144c08482f1b362e6bd5c36ef27 177 Gene3D G3DSA:1.20.120.80 5 177 6.1E-34 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 SUPERFAMILY SSF56176 2 218 6.22E-60 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 SMART SM01092 225 324 1.5E-31 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 218 1.4E-53 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 Gene3D G3DSA:3.30.390.50 222 326 5.4E-27 T 14-10-2018 Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 319 4.4E-17 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 SUPERFAMILY SSF55447 224 324 7.59E-26 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Atu5499 c4df720223e57ed1bf5f9851fd0e7adc 329 Gene3D G3DSA:3.30.465.10 1 219 5.1E-80 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Atu2345 288bc474b8655b67a7306cdb2a33f9e8 348 Gene3D G3DSA:3.90.850.10 118 339 1.8E-7 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu2345 288bc474b8655b67a7306cdb2a33f9e8 348 PIRSF PIRSF033905 17 348 3.8E-180 T 14-10-2018 IPR009645 Uncharacterised conserved protein GguC Atu2345 288bc474b8655b67a7306cdb2a33f9e8 348 SUPERFAMILY SSF56529 135 330 2.29E-15 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site Atu3121 703cc69ae0603803926778ebdd87b7a1 69 PRINTS PR00050 Cold shock protein signature 40 58 4.0E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 PRINTS PR00050 Cold shock protein signature 25 34 4.0E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 PRINTS PR00050 Cold shock protein signature 4 19 4.0E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 PIRSF PIRSF002599 1 69 4.2E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 SUPERFAMILY SSF50249 1 67 1.05E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu3121 703cc69ae0603803926778ebdd87b7a1 69 Gene3D G3DSA:2.40.50.140 2 67 2.6E-25 T 14-10-2018 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 SMART SM00357 3 69 4.9E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu3121 703cc69ae0603803926778ebdd87b7a1 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 3.2E-25 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu1396 b2265fae8fad1ff322d8ec7e03d095ba 243 Pfam PF00005 ABC transporter 19 167 1.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1396 b2265fae8fad1ff322d8ec7e03d095ba 243 SUPERFAMILY SSF52540 4 237 6.71E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1396 b2265fae8fad1ff322d8ec7e03d095ba 243 PIRSF PIRSF039085 1 243 3.4E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu1396 b2265fae8fad1ff322d8ec7e03d095ba 243 Gene3D G3DSA:3.40.50.300 2 242 2.3E-74 T 14-10-2018 Atu1396 b2265fae8fad1ff322d8ec7e03d095ba 243 SMART SM00382 28 215 9.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1396 b2265fae8fad1ff322d8ec7e03d095ba 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5536 142190e6aa4cb124076641800803118b 579 Pfam PF00795 Carbon-nitrogen hydrolase 296 521 3.1E-27 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu5536 142190e6aa4cb124076641800803118b 579 Pfam PF00795 Carbon-nitrogen hydrolase 8 247 8.8E-48 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu5536 142190e6aa4cb124076641800803118b 579 Gene3D G3DSA:3.60.110.10 289 579 5.4E-47 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu5536 142190e6aa4cb124076641800803118b 579 SUPERFAMILY SSF56317 289 552 1.44E-45 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu5536 142190e6aa4cb124076641800803118b 579 SUPERFAMILY SSF56317 6 265 1.31E-70 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu5536 142190e6aa4cb124076641800803118b 579 Gene3D G3DSA:3.60.110.10 8 267 1.6E-78 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu1217 bb64baee21b649481d9cf6a63dab928b 345 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Atu1217 bb64baee21b649481d9cf6a63dab928b 345 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 306 8.0E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Atu1217 bb64baee21b649481d9cf6a63dab928b 345 SUPERFAMILY SSF53686 2 328 3.93E-93 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Atu1217 bb64baee21b649481d9cf6a63dab928b 345 Gene3D G3DSA:3.40.50.1100 9 312 8.0E-116 T 14-10-2018 Atu1217 bb64baee21b649481d9cf6a63dab928b 345 Gene3D G3DSA:3.40.50.1100 38 151 8.0E-116 T 14-10-2018 Atu3624 e4aa2a34f414603230e90b77c0bcb045 93 Gene3D G3DSA:3.30.300.90 1 89 1.4E-30 T 14-10-2018 Atu3624 e4aa2a34f414603230e90b77c0bcb045 93 SUPERFAMILY SSF82657 2 91 6.93E-25 T 14-10-2018 IPR036065 BolA-like superfamily Atu3624 e4aa2a34f414603230e90b77c0bcb045 93 PIRSF PIRSF003113 1 93 5.9E-30 T 14-10-2018 IPR002634 BolA protein Atu3624 e4aa2a34f414603230e90b77c0bcb045 93 Pfam PF01722 BolA-like protein 11 89 7.9E-30 T 14-10-2018 IPR002634 BolA protein Atu3539 861d34f75ea8c222b4006cb1dd26afdf 185 SMART SM00507 81 131 1.0E-11 T 14-10-2018 IPR003615 HNH nuclease Atu3539 861d34f75ea8c222b4006cb1dd26afdf 185 Pfam PF14279 HNH endonuclease 94 143 1.4E-15 T 14-10-2018 IPR029471 HNH endonuclease 5 Atu3539 861d34f75ea8c222b4006cb1dd26afdf 185 Gene3D G3DSA:3.30.40.60 73 161 4.6E-20 T 14-10-2018 Atu2017 49a854e2f3c22edc49a93c152c9925d2 89 Gene3D G3DSA:3.30.2310.20 1 88 1.7E-35 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu2017 49a854e2f3c22edc49a93c152c9925d2 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 88 3.0E-31 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Atu2017 49a854e2f3c22edc49a93c152c9925d2 89 SUPERFAMILY SSF143011 1 87 1.57E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu2017 49a854e2f3c22edc49a93c152c9925d2 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 88 1.6E-39 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Atu0074 70c54617493812e0c2ea81733d6c4317 253 Pfam PF00899 ThiF family 12 250 1.9E-52 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Atu0074 70c54617493812e0c2ea81733d6c4317 253 Gene3D G3DSA:3.40.50.720 4 252 1.7E-73 T 14-10-2018 Atu0074 70c54617493812e0c2ea81733d6c4317 253 SUPERFAMILY SSF69572 3 249 2.88E-75 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Atu5265 1526d4698d57dfb9211fd70a08c8cd45 422 Gene3D G3DSA:3.40.190.10 24 418 8.4E-62 T 14-10-2018 Atu5265 1526d4698d57dfb9211fd70a08c8cd45 422 SUPERFAMILY SSF53850 27 410 3.51E-58 T 14-10-2018 Atu5265 1526d4698d57dfb9211fd70a08c8cd45 422 Pfam PF13416 Bacterial extracellular solute-binding protein 47 349 2.3E-25 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu2063 f260eff8f5a1bf9e1b13dd5df212fa44 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 135 5.3E-28 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Atu1278 49fb41e6ed038afa70afb1088c053b8c 163 SUPERFAMILY SSF54862 36 146 2.18E-27 T 14-10-2018 Atu1278 49fb41e6ed038afa70afb1088c053b8c 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 1.9E-48 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1278 49fb41e6ed038afa70afb1088c053b8c 163 Pfam PF12838 4Fe-4S dicluster domain 62 117 5.5E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Atu1278 49fb41e6ed038afa70afb1088c053b8c 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Atu1278 49fb41e6ed038afa70afb1088c053b8c 163 Gene3D G3DSA:3.30.70.3270 36 161 5.3E-42 T 14-10-2018 Atu1278 49fb41e6ed038afa70afb1088c053b8c 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 160 28.188 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 304 2.9E-95 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 Gene3D G3DSA:3.40.50.1370 12 299 2.0E-94 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 3.2E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 3.2E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 3.2E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.2E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 1.1E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 1.1E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 136 153 1.1E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 1.1E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 1.1E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 1.1E-28 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 Gene3D G3DSA:3.40.50.1370 137 283 2.0E-94 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 302 1.8E-27 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 149 5.6E-40 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 6 306 39.837 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Atu1308 5c52862500fd759a582f7318a4b19a2e 313 SUPERFAMILY SSF53671 2 304 7.99E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Atu0635 7f6dbc39024c2a24711ef49a33a4239a 98 Pfam PF09413 Putative prokaryotic signal transducing protein 23 86 1.5E-19 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 Atu0635 7f6dbc39024c2a24711ef49a33a4239a 98 Gene3D G3DSA:3.30.70.790 21 97 2.9E-33 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Atu0635 7f6dbc39024c2a24711ef49a33a4239a 98 SUPERFAMILY SSF54913 23 95 8.0E-23 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atu1647 a309ad91e0e985476ac8cb5395135051 386 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 169 379 6.3E-66 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Atu1647 a309ad91e0e985476ac8cb5395135051 386 SUPERFAMILY SSF52091 23 95 2.55E-8 T 14-10-2018 IPR036513 STAS domain superfamily Atu1647 a309ad91e0e985476ac8cb5395135051 386 Pfam PF02405 Permease MlaE 169 379 5.5E-66 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Atu1647 a309ad91e0e985476ac8cb5395135051 386 Gene3D G3DSA:3.30.750.24 21 106 1.2E-5 T 14-10-2018 IPR036513 STAS domain superfamily Atu1647 a309ad91e0e985476ac8cb5395135051 386 Pfam PF13466 STAS domain 30 94 5.5E-7 T 14-10-2018 IPR002645 STAS domain Atu1565 056140b0c977f238fc0c8461d0211c65 200 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 171 2.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Atu1565 056140b0c977f238fc0c8461d0211c65 200 Gene3D G3DSA:2.160.10.10 95 198 1.9E-26 T 14-10-2018 Atu1565 056140b0c977f238fc0c8461d0211c65 200 SUPERFAMILY SSF51161 60 191 2.22E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu2354 747a5de55526793bb891b996c7a8b7fd 168 Gene3D G3DSA:1.10.10.10 13 168 3.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2354 747a5de55526793bb891b996c7a8b7fd 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2354 747a5de55526793bb891b996c7a8b7fd 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2354 747a5de55526793bb891b996c7a8b7fd 168 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 1.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2354 747a5de55526793bb891b996c7a8b7fd 168 Pfam PF12802 MarR family 61 118 1.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2354 747a5de55526793bb891b996c7a8b7fd 168 SUPERFAMILY SSF46785 30 167 5.01E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2354 747a5de55526793bb891b996c7a8b7fd 168 SMART SM00347 55 155 2.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2116 5411e21f30bcda11ff4d09e6baebb03f 211 Pfam PF01810 LysE type translocator 15 173 9.4E-8 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu1817 ffde8a25e9f7e5454dbb9dfa1a62bebf 402 Pfam PF12704 MacB-like periplasmic core domain 20 241 2.7E-43 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Atu1817 ffde8a25e9f7e5454dbb9dfa1a62bebf 402 Pfam PF02687 FtsX-like permease family 308 395 1.9E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu4496 7f28b40e02177260b0a3a7d61518f8e7 230 Gene3D G3DSA:3.40.630.30 4 224 5.9E-54 T 14-10-2018 Atu4496 7f28b40e02177260b0a3a7d61518f8e7 230 Pfam PF13302 Acetyltransferase (GNAT) domain 62 164 7.6E-10 T 14-10-2018 IPR000182 GNAT domain Atu4496 7f28b40e02177260b0a3a7d61518f8e7 230 SUPERFAMILY SSF55729 33 188 2.41E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu5220 da355019b14e6fb7d78be24159e29282 345 Gene3D G3DSA:3.40.190.100 120 269 9.0E-99 T 14-10-2018 Atu5220 da355019b14e6fb7d78be24159e29282 345 SUPERFAMILY SSF53850 31 341 4.35E-71 T 14-10-2018 Atu5220 da355019b14e6fb7d78be24159e29282 345 Gene3D G3DSA:3.40.190.10 32 341 9.0E-99 T 14-10-2018 Atu5220 da355019b14e6fb7d78be24159e29282 345 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 328 6.6E-60 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu3405 02d545a0b9fa9efc812df3615bbe9433 222 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 7 200 5.6E-61 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 Atu3405 02d545a0b9fa9efc812df3615bbe9433 222 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 8 183 9.9E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Atu3405 02d545a0b9fa9efc812df3615bbe9433 222 SUPERFAMILY SSF56784 6 220 2.75E-41 T 14-10-2018 IPR036412 HAD-like superfamily Atu3405 02d545a0b9fa9efc812df3615bbe9433 222 Gene3D G3DSA:3.40.50.1000 7 200 3.4E-45 T 14-10-2018 IPR023214 HAD superfamily Atu3405 02d545a0b9fa9efc812df3615bbe9433 222 Gene3D G3DSA:1.10.150.750 20 93 3.4E-45 T 14-10-2018 Atu3405 02d545a0b9fa9efc812df3615bbe9433 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 97 189 1.1E-9 T 14-10-2018 Atu3237 491a6cd237ccdac2c265ca531349d4e5 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 273 1.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3237 491a6cd237ccdac2c265ca531349d4e5 282 SUPERFAMILY SSF161098 15 281 9.35E-65 T 14-10-2018 IPR035906 MetI-like superfamily Atu3237 491a6cd237ccdac2c265ca531349d4e5 282 Gene3D G3DSA:1.10.3720.10 10 273 1.5E-56 T 14-10-2018 IPR035906 MetI-like superfamily Atu1040 66d809de70dffc305c991a911552e6d5 406 Pfam PF07690 Major Facilitator Superfamily 30 360 1.7E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1040 66d809de70dffc305c991a911552e6d5 406 Gene3D G3DSA:1.20.1250.20 210 399 5.2E-19 T 14-10-2018 Atu1040 66d809de70dffc305c991a911552e6d5 406 SUPERFAMILY SSF103473 8 402 2.75E-58 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1040 66d809de70dffc305c991a911552e6d5 406 Gene3D G3DSA:1.20.1250.20 5 197 2.4E-24 T 14-10-2018 Atu2076 a3242a457adce1f30f13d4b826ab4917 163 PIRSF PIRSF003174 1 163 3.2E-45 T 14-10-2018 IPR010292 Uncharacterised protein family CreA Atu2076 a3242a457adce1f30f13d4b826ab4917 163 Pfam PF05981 CreA protein 27 153 2.3E-45 T 14-10-2018 IPR010292 Uncharacterised protein family CreA Atu2331 ad5db3489b2c0c69dae3f5814a147df1 251 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 128 249 2.1E-43 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 Atu2331 ad5db3489b2c0c69dae3f5814a147df1 251 SUPERFAMILY SSF53335 74 230 4.27E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2331 ad5db3489b2c0c69dae3f5814a147df1 251 Gene3D G3DSA:3.40.50.150 24 251 3.1E-76 T 14-10-2018 Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 2 202 9.9E-87 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 Gene3D G3DSA:3.40.50.880 1 206 1.1E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 203 36.017 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 PIRSF PIRSF001586 1 207 3.0E-78 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 SUPERFAMILY SSF52317 3 202 1.04E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 17 187 2.1E-34 T 14-10-2018 Atu1845 971283b4cdca598d9029e0c3dd1b8dcf 207 SMART SM01211 1 205 2.0E-99 T 14-10-2018 Atu1691 8f38b6096950f665c111784f189dab46 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 173 336 6.0E-44 T 14-10-2018 IPR000160 GGDEF domain Atu1691 8f38b6096950f665c111784f189dab46 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 334 1.5E-42 T 14-10-2018 IPR000160 GGDEF domain Atu1691 8f38b6096950f665c111784f189dab46 356 SMART SM00267 165 338 6.6E-57 T 14-10-2018 IPR000160 GGDEF domain Atu1691 8f38b6096950f665c111784f189dab46 356 SUPERFAMILY SSF55073 181 340 1.8E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu1691 8f38b6096950f665c111784f189dab46 356 Gene3D G3DSA:3.30.70.270 174 352 1.0E-52 T 14-10-2018 Atu2342 ea67e94a307e5770b5a94bb1da2be078 171 Gene3D G3DSA:3.40.630.30 28 168 3.7E-17 T 14-10-2018 Atu2342 ea67e94a307e5770b5a94bb1da2be078 171 SUPERFAMILY SSF55729 37 160 1.01E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2342 ea67e94a307e5770b5a94bb1da2be078 171 Pfam PF00583 Acetyltransferase (GNAT) family 65 145 3.0E-7 T 14-10-2018 IPR000182 GNAT domain Atu1626 6bd1eca316e9b5b51354592e34d5a885 296 Gene3D G3DSA:3.40.50.720 1 283 2.4E-41 T 14-10-2018 Atu1626 6bd1eca316e9b5b51354592e34d5a885 296 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 157 3.8E-22 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu1626 6bd1eca316e9b5b51354592e34d5a885 296 SUPERFAMILY SSF51735 1 279 1.18E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 Pfam PF00293 NUDIX domain 185 295 1.2E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 ProSitePatterns PS00893 Nudix box signature. 215 236 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 Gene3D G3DSA:3.90.79.20 29 179 1.1E-13 T 14-10-2018 Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 48 145 1.1E-12 T 14-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 SUPERFAMILY SSF55811 134 317 5.55E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 148 178 1.6E-10 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Atu0098 895a46dc3f47658b64ba1411fa7299f2 320 Gene3D G3DSA:3.90.79.10 181 318 8.0E-35 T 14-10-2018 Atu2229 dc501f00ebea10299e7487de6caa058e 237 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 232 1.7E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu2229 dc501f00ebea10299e7487de6caa058e 237 SUPERFAMILY SSF53850 21 232 9.05E-34 T 14-10-2018 Atu2229 dc501f00ebea10299e7487de6caa058e 237 Gene3D G3DSA:3.40.190.10 27 232 6.4E-27 T 14-10-2018 Atu2229 dc501f00ebea10299e7487de6caa058e 237 Gene3D G3DSA:3.40.190.10 105 193 6.4E-27 T 14-10-2018 Atu4046 31d7e0e9bef86d7e5b3fa06c6ee701a9 332 SUPERFAMILY SSF53850 21 327 9.56E-78 T 14-10-2018 Atu4046 31d7e0e9bef86d7e5b3fa06c6ee701a9 332 Gene3D G3DSA:3.40.190.10 29 320 3.6E-39 T 14-10-2018 Atu4046 31d7e0e9bef86d7e5b3fa06c6ee701a9 332 Gene3D G3DSA:3.40.190.100 113 249 3.6E-39 T 14-10-2018 Atu4046 31d7e0e9bef86d7e5b3fa06c6ee701a9 332 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 311 2.7E-65 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu2702 7a9d96961263a6b6b3a428e909cede92 248 Pfam PF01925 Sulfite exporter TauE/SafE 10 243 1.0E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu2239 fff9043894326d3da56b49d78b0dc275 192 Gene3D G3DSA:2.102.10.10 47 192 1.4E-50 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atu2239 fff9043894326d3da56b49d78b0dc275 192 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 7 46 1.9E-21 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Atu2239 fff9043894326d3da56b49d78b0dc275 192 SUPERFAMILY SSF50022 36 189 6.02E-39 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Atu2239 fff9043894326d3da56b49d78b0dc275 192 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 15 192 3.2E-75 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Atu2239 fff9043894326d3da56b49d78b0dc275 192 Pfam PF00355 Rieske [2Fe-2S] domain 125 178 1.5E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Atu2239 fff9043894326d3da56b49d78b0dc275 192 PRINTS PR00162 Rieske 2Fe-2S subunit signature 164 176 2.9E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Atu2239 fff9043894326d3da56b49d78b0dc275 192 PRINTS PR00162 Rieske 2Fe-2S subunit signature 130 141 2.9E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Atu2239 fff9043894326d3da56b49d78b0dc275 192 PRINTS PR00162 Rieske 2Fe-2S subunit signature 152 164 2.9E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Atu2239 fff9043894326d3da56b49d78b0dc275 192 Gene3D G3DSA:1.20.5.510 7 46 1.3E-20 T 14-10-2018 Atu2239 fff9043894326d3da56b49d78b0dc275 192 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 39 2.5E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Atu0871 84349eb9eb578a566034ec2d5be889fc 293 Gene3D G3DSA:3.30.470.10 1 135 2.7E-35 T 14-10-2018 Atu0871 84349eb9eb578a566034ec2d5be889fc 293 Gene3D G3DSA:3.20.10.10 138 290 9.6E-41 T 14-10-2018 Atu0871 84349eb9eb578a566034ec2d5be889fc 293 ProSitePatterns PS00770 Aminotransferases class-IV signature. 191 220 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Atu0871 84349eb9eb578a566034ec2d5be889fc 293 SUPERFAMILY SSF56752 10 287 2.75E-74 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Atu0871 84349eb9eb578a566034ec2d5be889fc 293 Pfam PF01063 Amino-transferase class IV 40 264 1.7E-40 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Atu4329 841b102702eff86c4f2ee5d5ace2e285 300 Pfam PF10531 SLBB domain 88 135 9.8E-4 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4329 841b102702eff86c4f2ee5d5ace2e285 300 Gene3D G3DSA:3.30.1950.10 3 84 3.0E-54 T 14-10-2018 Atu4329 841b102702eff86c4f2ee5d5ace2e285 300 Gene3D G3DSA:3.10.560.10 85 166 3.0E-54 T 14-10-2018 Atu4329 841b102702eff86c4f2ee5d5ace2e285 300 Gene3D G3DSA:3.10.560.10 167 268 3.0E-54 T 14-10-2018 Atu4329 841b102702eff86c4f2ee5d5ace2e285 300 Pfam PF02563 Polysaccharide biosynthesis/export protein 2 80 5.5E-10 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Atu4890 d17f9d816af161ebb859b4128bbe5561 274 Gene3D G3DSA:3.30.420.10 105 268 6.9E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu4890 d17f9d816af161ebb859b4128bbe5561 274 SUPERFAMILY SSF53098 105 271 2.53E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu4890 d17f9d816af161ebb859b4128bbe5561 274 Pfam PF00665 Integrase core domain 107 227 3.4E-23 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu4890 d17f9d816af161ebb859b4128bbe5561 274 Pfam PF13276 HTH-like domain 33 86 6.2E-13 T 14-10-2018 IPR025948 HTH-like domain Atu5020 45f4d7e76e766f322ffa36bbb346539c 444 Gene3D G3DSA:3.40.50.620 142 359 1.3E-19 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu5020 45f4d7e76e766f322ffa36bbb346539c 444 SUPERFAMILY SSF52402 143 349 9.07E-5 T 14-10-2018 Atu1590 3bf4cfcdc74a9a1308887362f71a5043 319 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 306 4.2E-78 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Atu1590 3bf4cfcdc74a9a1308887362f71a5043 319 SUPERFAMILY SSF53590 1 313 7.33E-90 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Atu1590 3bf4cfcdc74a9a1308887362f71a5043 319 Gene3D G3DSA:3.90.245.10 1 316 1.1E-98 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Atu1832 2c6339bd9934d5d174812ec72ad37a0c 432 Gene3D G3DSA:2.70.70.10 274 424 1.3E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu1832 2c6339bd9934d5d174812ec72ad37a0c 432 SUPERFAMILY SSF51261 293 421 8.37E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu1832 2c6339bd9934d5d174812ec72ad37a0c 432 Pfam PF01551 Peptidase family M23 324 417 5.7E-33 T 14-10-2018 IPR016047 Peptidase M23 Atu0032 ac086da2724867c7a20b75e61ff4ecc9 154 Pfam PF07475 HPr Serine kinase C-terminal domain 3 90 8.6E-16 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Atu0032 ac086da2724867c7a20b75e61ff4ecc9 154 Gene3D G3DSA:3.40.50.300 2 131 4.0E-26 T 14-10-2018 Atu0032 ac086da2724867c7a20b75e61ff4ecc9 154 SUPERFAMILY SSF53795 3 95 4.58E-15 T 14-10-2018 Atu1922 a90df9e1b513c0f858cdcc3f58408990 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 8.0E-43 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1922 a90df9e1b513c0f858cdcc3f58408990 141 Pfam PF01196 Ribosomal protein L17 20 116 2.9E-35 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1922 a90df9e1b513c0f858cdcc3f58408990 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1922 a90df9e1b513c0f858cdcc3f58408990 141 SUPERFAMILY SSF64263 1 119 6.8E-49 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1922 a90df9e1b513c0f858cdcc3f58408990 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.417 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1922 a90df9e1b513c0f858cdcc3f58408990 141 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu0243 5e0b95709cb4c15994295c40727d9217 203 Pfam PF00583 Acetyltransferase (GNAT) family 36 147 1.4E-4 T 14-10-2018 IPR000182 GNAT domain Atu0243 5e0b95709cb4c15994295c40727d9217 203 Gene3D G3DSA:3.40.630.30 15 190 1.1E-12 T 14-10-2018 Atu0243 5e0b95709cb4c15994295c40727d9217 203 SUPERFAMILY SSF55729 18 178 6.69E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2421 4a5accb8f88d03cba95bc6c3d650da7f 238 SUPERFAMILY SSF88713 36 236 1.43E-53 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu2421 4a5accb8f88d03cba95bc6c3d650da7f 238 Pfam PF01522 Polysaccharide deacetylase 44 151 2.6E-30 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atu2421 4a5accb8f88d03cba95bc6c3d650da7f 238 Gene3D G3DSA:3.20.20.370 25 238 8.5E-57 T 14-10-2018 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 SUPERFAMILY SSF50249 117 182 1.59E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 SMART SM00357 119 183 7.9E-13 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 SMART SM00357 27 91 8.7E-9 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 PRINTS PR00050 Cold shock protein signature 156 174 9.2E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 PRINTS PR00050 Cold shock protein signature 141 150 9.2E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 PRINTS PR00050 Cold shock protein signature 120 135 9.2E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 Gene3D G3DSA:2.40.50.140 119 181 1.4E-16 T 14-10-2018 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 SUPERFAMILY SSF50249 25 90 5.36E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 Gene3D G3DSA:2.40.50.140 19 101 1.5E-16 T 14-10-2018 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 Pfam PF00313 'Cold-shock' DNA-binding domain 119 180 1.4E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu1803 9cca837b111d8ff4f00c4c5ba690a491 192 Pfam PF00313 'Cold-shock' DNA-binding domain 27 83 6.4E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Atu4385 75d5956582aaa356e512ae58f8026b33 149 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 58 126 4.9E-29 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 Atu5411 446e1ccdb9bfab8fb785f23a30b91486 346 SUPERFAMILY SSF53850 48 341 8.28E-46 T 14-10-2018 Atu5411 446e1ccdb9bfab8fb785f23a30b91486 346 Gene3D G3DSA:3.40.190.10 50 313 4.8E-59 T 14-10-2018 Atu5411 446e1ccdb9bfab8fb785f23a30b91486 346 Gene3D G3DSA:3.40.190.10 135 340 4.8E-59 T 14-10-2018 Atu5411 446e1ccdb9bfab8fb785f23a30b91486 346 Pfam PF13416 Bacterial extracellular solute-binding protein 57 312 3.2E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5150 7a5e47e895759bd800c18abf379099aa 211 SUPERFAMILY SSF47616 81 203 1.39E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu5150 7a5e47e895759bd800c18abf379099aa 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 1.1E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu5150 7a5e47e895759bd800c18abf379099aa 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 197 4.5E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal Atu5150 7a5e47e895759bd800c18abf379099aa 211 SUPERFAMILY SSF52833 1 84 3.67E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu5150 7a5e47e895759bd800c18abf379099aa 211 Gene3D G3DSA:1.20.1050.10 82 196 2.9E-58 T 14-10-2018 Atu5150 7a5e47e895759bd800c18abf379099aa 211 Gene3D G3DSA:3.40.30.10 3 200 2.9E-58 T 14-10-2018 Atu0553 8e8b0b96cf5865977ba676465345bdf2 112 Pfam PF02049 Flagellar hook-basal body complex protein FliE 31 112 2.1E-17 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atu0553 8e8b0b96cf5865977ba676465345bdf2 112 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 12 112 14.792 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Atu0506 39114be56d97dab6888b871a311fae66 195 Gene3D G3DSA:2.60.120.590 14 190 5.5E-49 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Atu0506 39114be56d97dab6888b871a311fae66 195 SUPERFAMILY SSF51197 10 190 2.75E-38 T 14-10-2018 Atu0506 39114be56d97dab6888b871a311fae66 195 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 50 187 3.6E-18 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Atu0337 4956f2c2e32e378737132956662ad64e 317 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 50 245 3.4E-60 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 Atu0337 4956f2c2e32e378737132956662ad64e 317 Pfam PF01343 Peptidase family S49 106 248 1.9E-38 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Atu0337 4956f2c2e32e378737132956662ad64e 317 Gene3D G3DSA:3.90.226.10 52 245 4.2E-59 T 14-10-2018 Atu0337 4956f2c2e32e378737132956662ad64e 317 SUPERFAMILY SSF52096 31 241 4.97E-37 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu0337 4956f2c2e32e378737132956662ad64e 317 Gene3D G3DSA:3.40.1750.20 145 211 4.2E-59 T 14-10-2018 Atu3631 821393b33920e55732c695387d758cb1 379 SUPERFAMILY SSF141523 5 123 6.67E-7 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2504 2276577be6b55a6497b55535741337f5 218 SMART SM00895 81 210 6.2E-14 T 14-10-2018 IPR011711 GntR, C-terminal Atu2504 2276577be6b55a6497b55535741337f5 218 Gene3D G3DSA:1.20.120.530 77 218 1.4E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2504 2276577be6b55a6497b55535741337f5 218 Pfam PF07729 FCD domain 81 209 2.7E-19 T 14-10-2018 IPR011711 GntR, C-terminal Atu2504 2276577be6b55a6497b55535741337f5 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 4.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2504 2276577be6b55a6497b55535741337f5 218 SUPERFAMILY SSF48008 79 216 2.46E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu2504 2276577be6b55a6497b55535741337f5 218 Gene3D G3DSA:1.10.10.10 1 72 1.9E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2504 2276577be6b55a6497b55535741337f5 218 SMART SM00345 13 71 0.0061 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu2504 2276577be6b55a6497b55535741337f5 218 SUPERFAMILY SSF46785 3 84 2.78E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3113 542ae1eacc157101c1082868e56fbc1e 295 SUPERFAMILY SSF160964 7 50 2.48E-5 T 14-10-2018 Atu3113 542ae1eacc157101c1082868e56fbc1e 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 288 8.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3113 542ae1eacc157101c1082868e56fbc1e 295 SUPERFAMILY SSF161098 54 281 1.27E-52 T 14-10-2018 IPR035906 MetI-like superfamily Atu3113 542ae1eacc157101c1082868e56fbc1e 295 Gene3D G3DSA:1.10.3720.10 48 290 2.9E-61 T 14-10-2018 IPR035906 MetI-like superfamily Atu3438 78437092f138cae6395a2e730e029eb2 351 PRINTS PR00069 Aldo-keto reductase signature 104 122 6.3E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3438 78437092f138cae6395a2e730e029eb2 351 PRINTS PR00069 Aldo-keto reductase signature 40 64 6.3E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3438 78437092f138cae6395a2e730e029eb2 351 PRINTS PR00069 Aldo-keto reductase signature 135 152 6.3E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3438 78437092f138cae6395a2e730e029eb2 351 SUPERFAMILY SSF51430 3 312 5.24E-94 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3438 78437092f138cae6395a2e730e029eb2 351 Gene3D G3DSA:3.20.20.100 2 324 9.8E-103 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3438 78437092f138cae6395a2e730e029eb2 351 Pfam PF00248 Aldo/keto reductase family 16 311 6.1E-69 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 SMART SM00862 161 237 2.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 SUPERFAMILY SSF46894 138 238 4.54E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 237 7.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 Gene3D G3DSA:3.40.50.2300 1 127 1.1E-35 T 14-10-2018 Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 Gene3D G3DSA:1.10.10.10 136 240 6.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 SMART SM00448 2 112 5.2E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 SUPERFAMILY SSF52172 2 124 3.42E-38 T 14-10-2018 IPR011006 CheY-like superfamily Atu0034 0a874367d85684f90b6eb3e9c46a1152 241 Pfam PF00072 Response regulator receiver domain 4 113 9.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0741 1541f57e2a94e68bb5eb282590d90284 127 Gene3D G3DSA:3.30.2130.10 2 127 8.7E-51 T 14-10-2018 Atu0741 1541f57e2a94e68bb5eb282590d90284 127 PIRSF PIRSF008459 3 127 3.8E-29 T 14-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 Atu0741 1541f57e2a94e68bb5eb282590d90284 127 SUPERFAMILY SSF55021 4 58 5.59E-18 T 14-10-2018 Atu0741 1541f57e2a94e68bb5eb282590d90284 127 Pfam PF13840 ACT domain 59 120 8.1E-18 T 14-10-2018 IPR027795 CASTOR, ACT domain Atu0741 1541f57e2a94e68bb5eb282590d90284 127 SUPERFAMILY SSF55021 62 125 1.68E-17 T 14-10-2018 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PRINTS PR00143 Citrate synthase signature 241 269 2.6E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PRINTS PR00143 Citrate synthase signature 380 394 2.6E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PRINTS PR00143 Citrate synthase signature 296 316 2.6E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PRINTS PR00143 Citrate synthase signature 165 178 2.6E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PRINTS PR00143 Citrate synthase signature 219 234 2.6E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PRINTS PR00143 Citrate synthase signature 360 376 2.6E-56 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 Gene3D G3DSA:1.10.580.10 57 412 1.5E-144 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 Gene3D G3DSA:2.20.28.60 3 50 1.2E-18 T 14-10-2018 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 423 2.3E-244 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 PIRSF PIRSF001369 37 429 6.7E-168 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 Gene3D G3DSA:1.10.230.10 268 377 1.5E-144 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 Pfam PF00285 Citrate synthase, C-terminal domain 46 412 1.0E-132 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Atu1392 00da7c92445dfe4e3e03d8e16d0d0701 429 SUPERFAMILY SSF48256 4 429 2.88E-167 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Atu1044 f73870792219f4cda0eced384dd50885 882 Pfam PF10101 Predicted membrane protein (DUF2339) 87 874 5.7E-142 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane Atu1044 f73870792219f4cda0eced384dd50885 882 PIRSF PIRSF035905 1 882 0.0 T 14-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein Atu4415 2dc141d1d15d40b531a8dffe4a436834 637 SUPERFAMILY SSF63829 308 606 5.49E-9 T 14-10-2018 Atu4415 2dc141d1d15d40b531a8dffe4a436834 637 Pfam PF05787 Bacterial protein of unknown function (DUF839) 76 610 1.6E-192 T 14-10-2018 IPR008557 Protein of unknown function DUF839 Atu1204 413b4bb683ed7acd570b3a9092b984e5 445 PIRSF PIRSF006247 1 445 9.7E-146 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Atu1204 413b4bb683ed7acd570b3a9092b984e5 445 Pfam PF02386 Cation transport protein 259 438 1.1E-26 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Atu1204 413b4bb683ed7acd570b3a9092b984e5 445 Pfam PF02386 Cation transport protein 21 241 6.8E-34 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Atu4155 a212b665c3c84015fa6bd3cef321b170 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 1.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4155 a212b665c3c84015fa6bd3cef321b170 260 SUPERFAMILY SSF161098 57 238 3.16E-32 T 14-10-2018 IPR035906 MetI-like superfamily Atu4155 a212b665c3c84015fa6bd3cef321b170 260 Gene3D G3DSA:1.10.3720.10 54 246 2.8E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu2583 20f51a11efe792cb5915bd3d22302746 365 Pfam PF00534 Glycosyl transferases group 1 200 338 1.0E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu2583 20f51a11efe792cb5915bd3d22302746 365 Gene3D G3DSA:3.40.50.2000 16 351 1.6E-38 T 14-10-2018 Atu2583 20f51a11efe792cb5915bd3d22302746 365 Gene3D G3DSA:3.40.50.2000 169 344 1.6E-38 T 14-10-2018 Atu2583 20f51a11efe792cb5915bd3d22302746 365 SUPERFAMILY SSF53756 13 357 7.07E-48 T 14-10-2018 Atu4237 141f6430b87a7e38bdcd29f5d1950de9 200 SUPERFAMILY SSF160519 1 193 3.53E-69 T 14-10-2018 IPR035936 BB2672 superfamily Atu4237 141f6430b87a7e38bdcd29f5d1950de9 200 Pfam PF06684 Amino acid synthesis 5 181 1.8E-65 T 14-10-2018 IPR009569 Amino acid synthesis, putative Atu4237 141f6430b87a7e38bdcd29f5d1950de9 200 Gene3D G3DSA:3.30.1330.110 1 192 1.6E-66 T 14-10-2018 IPR035936 BB2672 superfamily Atu4342 418cea4dd65f9a475a1aca8f74f4e723 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 163 7.4E-64 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Atu4342 418cea4dd65f9a475a1aca8f74f4e723 169 PIRSF PIRSF028301 1 169 2.1E-65 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Atu4342 418cea4dd65f9a475a1aca8f74f4e723 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 5.2E-61 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Atu5533 f3fcedd8f38549059c518603f57b15cb 379 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 23 351 5.0E-120 T 14-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC Atu5533 f3fcedd8f38549059c518603f57b15cb 379 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 341 2.8E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 Gene3D G3DSA:3.40.50.720 13 262 6.1E-59 T 14-10-2018 Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 5.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 5.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 5.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 9.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 9.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 9.9E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 SUPERFAMILY SSF51735 14 251 3.56E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1130 67134b1bbabbc1c99862d1c48c9d4b7f 262 Pfam PF00106 short chain dehydrogenase 14 195 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2684 c84ecbb1dc400683351743526de35881 221 Pfam PF06764 Protein of unknown function (DUF1223) 4 198 6.9E-63 T 14-10-2018 IPR010634 Protein of unknown function DUF1223 Atu2684 c84ecbb1dc400683351743526de35881 221 SUPERFAMILY SSF52833 3 209 2.85E-70 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 3.9E-41 T 14-10-2018 Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 5.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.7E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 SUPERFAMILY SSF51735 4 256 2.1E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4366 55bc8cb3abd3baaaf19c0c053500e1c0 257 Gene3D G3DSA:3.40.50.720 1 257 1.1E-64 T 14-10-2018 Atu2409 77a5df488ea3bd4aa84dff4d4765ee8c 418 Gene3D G3DSA:3.40.50.1820 35 331 8.8E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2409 77a5df488ea3bd4aa84dff4d4765ee8c 418 SUPERFAMILY SSF53474 58 304 5.83E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5145 efaa1ae88a8a4f23a5e5af744c4b7ec4 152 Pfam PF13673 Acetyltransferase (GNAT) domain 43 138 1.3E-13 T 14-10-2018 IPR000182 GNAT domain Atu5145 efaa1ae88a8a4f23a5e5af744c4b7ec4 152 Gene3D G3DSA:3.40.630.30 17 147 7.0E-33 T 14-10-2018 Atu5145 efaa1ae88a8a4f23a5e5af744c4b7ec4 152 SUPERFAMILY SSF55729 25 139 1.58E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0075 d598698d3c6d1157bfc294bc3323e74d 158 Pfam PF00583 Acetyltransferase (GNAT) family 50 119 3.5E-10 T 14-10-2018 IPR000182 GNAT domain Atu0075 d598698d3c6d1157bfc294bc3323e74d 158 SUPERFAMILY SSF55729 13 156 1.12E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0075 d598698d3c6d1157bfc294bc3323e74d 158 Gene3D G3DSA:3.40.630.30 10 157 5.3E-21 T 14-10-2018 Atu4242 d5741a901b13a69195fe04cb36a6271e 104 Gene3D G3DSA:3.30.70.100 1 104 3.4E-44 T 14-10-2018 Atu4242 d5741a901b13a69195fe04cb36a6271e 104 Pfam PF07978 NIPSNAP 3 102 5.2E-34 T 14-10-2018 IPR012577 NIPSNAP Atu4242 d5741a901b13a69195fe04cb36a6271e 104 SUPERFAMILY SSF54909 1 103 4.29E-34 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1351 758027efc33d02aa91b5a5d95052a39f 208 PIRSF PIRSF010521 1 204 7.5E-78 T 14-10-2018 IPR010321 Protein of unknown function DUF922 Atu1351 758027efc33d02aa91b5a5d95052a39f 208 Pfam PF06037 Bacterial protein of unknown function (DUF922) 36 195 1.6E-51 T 14-10-2018 IPR010321 Protein of unknown function DUF922 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 Pfam PF01494 FAD binding domain 5 319 2.4E-22 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 SUPERFAMILY SSF51905 5 371 3.08E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1574 17009661eedfd6653d0d5f96228e57ef 393 Gene3D G3DSA:3.30.9.30 38 359 9.1E-93 T 14-10-2018 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 3.2E-17 T 14-10-2018 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 3.2E-17 T 14-10-2018 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 3.2E-17 T 14-10-2018 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.2E-17 T 14-10-2018 Atu1574 17009661eedfd6653d0d5f96228e57ef 393 Gene3D G3DSA:3.50.50.60 6 351 9.1E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1574 17009661eedfd6653d0d5f96228e57ef 393 SUPERFAMILY SSF54373 173 273 1.51E-10 T 14-10-2018 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 2.8E-38 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 SUPERFAMILY SSF56327 174 447 1.85E-76 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 Gene3D G3DSA:3.90.1820.20 2 443 2.4E-138 T 14-10-2018 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 SUPERFAMILY SSF51735 5 171 1.65E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 419 3.2E-59 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Atu4665 3c661841832e86b2f10f8ab83dd4bf8f 457 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 9.8E-69 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Atu4616 7835b6322be739a0cb9f135e3d51b6c0 297 Gene3D G3DSA:3.40.50.720 5 276 2.9E-103 T 14-10-2018 Atu4616 7835b6322be739a0cb9f135e3d51b6c0 297 Pfam PF04321 RmlD substrate binding domain 1 289 1.2E-110 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Atu4616 7835b6322be739a0cb9f135e3d51b6c0 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 287 1.9E-97 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Atu4616 7835b6322be739a0cb9f135e3d51b6c0 297 Gene3D G3DSA:3.90.25.10 158 281 2.9E-103 T 14-10-2018 Atu4616 7835b6322be739a0cb9f135e3d51b6c0 297 SUPERFAMILY SSF51735 1 289 1.26E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5535 4842054d948f1fe8c796bc8ab5c4064b 231 Gene3D G3DSA:3.40.50.300 1 228 2.3E-55 T 14-10-2018 Atu5535 4842054d948f1fe8c796bc8ab5c4064b 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 9.7E-94 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE Atu5535 4842054d948f1fe8c796bc8ab5c4064b 231 SMART SM00382 26 210 2.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5535 4842054d948f1fe8c796bc8ab5c4064b 231 Pfam PF00005 ABC transporter 17 159 1.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5535 4842054d948f1fe8c796bc8ab5c4064b 231 SUPERFAMILY SSF52540 2 222 2.45E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4738 9926743d0b981e6f924300dd936dba44 209 Gene3D G3DSA:2.160.10.10 1 208 3.1E-71 T 14-10-2018 Atu4738 9926743d0b981e6f924300dd936dba44 209 SUPERFAMILY SSF51161 51 206 7.21E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu4738 9926743d0b981e6f924300dd936dba44 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu4738 9926743d0b981e6f924300dd936dba44 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 5.3E-9 T 14-10-2018 IPR001451 Hexapeptide repeat Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 Gene3D G3DSA:1.10.10.10 2 96 3.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.6E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.6E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.6E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 SUPERFAMILY SSF46785 9 97 5.83E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 SMART SM00418 15 93 4.3E-27 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2278 7b48f03e119c2266f2c62f717458e9c7 106 Pfam PF01022 Bacterial regulatory protein, arsR family 22 67 2.7E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu1011 8b7a438a32a30e8cf48a238100cf3092 370 Gene3D G3DSA:3.40.640.10 47 271 3.5E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1011 8b7a438a32a30e8cf48a238100cf3092 370 Pfam PF00155 Aminotransferase class I and II 40 356 3.6E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu1011 8b7a438a32a30e8cf48a238100cf3092 370 SUPERFAMILY SSF53383 37 366 8.41E-60 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1011 8b7a438a32a30e8cf48a238100cf3092 370 Gene3D G3DSA:3.90.1150.10 24 358 3.5E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1011 8b7a438a32a30e8cf48a238100cf3092 370 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Atu1102 9ac53845603fd453042b4bf49c1861ad 207 SUPERFAMILY SSF53474 7 194 1.2E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1102 9ac53845603fd453042b4bf49c1861ad 207 Gene3D G3DSA:3.40.50.1820 1 204 3.2E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1102 9ac53845603fd453042b4bf49c1861ad 207 Pfam PF01738 Dienelactone hydrolase family 92 193 9.2E-5 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Atu5039 87d1d6816e613a209683d99998138ace 393 Gene3D G3DSA:1.10.10.10 318 381 1.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5039 87d1d6816e613a209683d99998138ace 393 SUPERFAMILY SSF140931 109 304 4.71E-46 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu5039 87d1d6816e613a209683d99998138ace 393 Pfam PF13412 Winged helix-turn-helix DNA-binding 320 361 2.4E-7 T 14-10-2018 Atu5039 87d1d6816e613a209683d99998138ace 393 PIRSF PIRSF038925 18 385 4.5E-121 T 14-10-2018 IPR026287 Adenosine monophosphate-protein transferase Atu5039 87d1d6816e613a209683d99998138ace 393 SUPERFAMILY SSF46785 318 376 3.67E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu5039 87d1d6816e613a209683d99998138ace 393 Gene3D G3DSA:1.10.3290.10 64 300 7.7E-54 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu5039 87d1d6816e613a209683d99998138ace 393 Pfam PF13784 Fic/DOC family N-terminal 44 125 1.3E-29 T 14-10-2018 IPR025758 Fic/DOC N-terminal Atu5039 87d1d6816e613a209683d99998138ace 393 Pfam PF02661 Fic/DOC family 132 236 3.1E-20 T 14-10-2018 IPR003812 Fido domain Atu2379 d04e7a506138f6ff06b318558553e85a 471 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 169 253 1.4E-7 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 SUPERFAMILY SSF53738 241 369 7.46E-7 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Gene3D G3DSA:3.40.120.10 1 150 4.8E-45 T 14-10-2018 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 5.1E-28 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 SUPERFAMILY SSF53738 157 254 8.63E-13 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 407 467 2.6E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Gene3D G3DSA:3.40.120.10 173 253 1.2E-33 T 14-10-2018 Atu2379 d04e7a506138f6ff06b318558553e85a 471 SUPERFAMILY SSF53738 2 128 4.71E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 SUPERFAMILY SSF55957 382 469 4.19E-15 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Gene3D G3DSA:3.40.120.10 255 373 3.6E-40 T 14-10-2018 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Gene3D G3DSA:3.30.310.50 376 470 6.3E-25 T 14-10-2018 Atu2379 d04e7a506138f6ff06b318558553e85a 471 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu2379 d04e7a506138f6ff06b318558553e85a 471 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 370 1.1E-11 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 Gene3D G3DSA:2.40.50.100 72 136 9.3E-6 T 14-10-2018 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 452 3.0E-126 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 Pfam PF13437 HlyD family secretion protein 301 407 6.4E-13 T 14-10-2018 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 Gene3D G3DSA:2.40.30.170 339 392 1.4E-10 T 14-10-2018 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 Gene3D G3DSA:2.40.50.100 302 338 1.4E-10 T 14-10-2018 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 Gene3D G3DSA:1.10.287.470 249 301 1.4E-10 T 14-10-2018 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 431 451 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 416 431 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu3323 3e0fea8053d70caf27032f05e6b9b509 452 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 1.2E-41 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Atu2398 b5455fa111d5b4389a0e405f634e988b 191 Gene3D G3DSA:2.60.260.20 31 103 4.8E-11 T 14-10-2018 Atu2398 b5455fa111d5b4389a0e405f634e988b 191 Gene3D G3DSA:3.30.70.790 104 175 6.4E-26 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Atu2398 b5455fa111d5b4389a0e405f634e988b 191 Pfam PF05194 UreE urease accessory protein, C-terminal domain 104 187 1.4E-27 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 Atu2398 b5455fa111d5b4389a0e405f634e988b 191 SUPERFAMILY SSF69287 31 103 2.09E-14 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily Atu2398 b5455fa111d5b4389a0e405f634e988b 191 Hamap MF_00822 Urease accessory protein UreE [ureE]. 32 171 20.474 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Atu2398 b5455fa111d5b4389a0e405f634e988b 191 SUPERFAMILY SSF69737 103 170 2.49E-20 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Atu2398 b5455fa111d5b4389a0e405f634e988b 191 Pfam PF02814 UreE urease accessory protein, N-terminal domain 39 97 1.6E-13 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal Atu2398 b5455fa111d5b4389a0e405f634e988b 191 SMART SM00988 33 97 2.3E-14 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal Atu2398 b5455fa111d5b4389a0e405f634e988b 191 PIRSF PIRSF036402 30 191 1.4E-43 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Atu1644 b25ff16c2d8d8ed8e7fbf141529be51b 201 SUPERFAMILY SSF159594 33 199 3.14E-43 T 14-10-2018 Atu1644 b25ff16c2d8d8ed8e7fbf141529be51b 201 Gene3D G3DSA:3.40.50.10610 26 201 1.7E-51 T 14-10-2018 Atu1644 b25ff16c2d8d8ed8e7fbf141529be51b 201 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 194 6.1E-33 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Atu5148 689c3c6ea6f926e3d94a78ee912b32d5 134 Gene3D G3DSA:3.30.300.20 1 123 1.6E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Atu5148 689c3c6ea6f926e3d94a78ee912b32d5 134 SUPERFAMILY SSF82784 8 132 2.88E-21 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Atu5148 689c3c6ea6f926e3d94a78ee912b32d5 134 Pfam PF02566 OsmC-like protein 39 130 1.0E-15 T 14-10-2018 IPR003718 OsmC/Ohr family Atu6073 04f684d1be6b16b54904d3b80cffb43a 531 PIRSF PIRSF002741 3 531 3.4E-128 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu6073 04f684d1be6b16b54904d3b80cffb43a 531 SUPERFAMILY SSF53850 32 529 8.14E-123 T 14-10-2018 Atu6073 04f684d1be6b16b54904d3b80cffb43a 531 Gene3D G3DSA:3.10.105.10 280 497 2.3E-46 T 14-10-2018 Atu6073 04f684d1be6b16b54904d3b80cffb43a 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 443 1.7E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu6073 04f684d1be6b16b54904d3b80cffb43a 531 Gene3D G3DSA:3.40.190.10 11 275 1.7E-68 T 14-10-2018 Atu0954 4c9ff03315fe2b3e2f568bb4aebc3b39 388 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 50 388 3.7E-66 T 14-10-2018 IPR006427 Phage portal protein, HK97 Atu0954 4c9ff03315fe2b3e2f568bb4aebc3b39 388 Pfam PF04860 Phage portal protein 58 386 3.6E-78 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Atu0460 b8e7d69b06457b4f1f03444c3baf41a2 70 Pfam PF05489 Phage Tail Protein X 3 62 1.5E-29 T 14-10-2018 IPR008861 Phage Tail Protein X-like Atu0460 b8e7d69b06457b4f1f03444c3baf41a2 70 Gene3D G3DSA:3.10.350.10 4 70 2.7E-25 T 14-10-2018 IPR036779 LysM domain superfamily Atu4100 ab0ed70203c1d79dbe1599504bb0a1fd 162 SMART SM00086 115 157 9.5E-4 T 14-10-2018 IPR001610 PAC motif Atu4100 ab0ed70203c1d79dbe1599504bb0a1fd 162 Gene3D G3DSA:3.30.450.20 39 153 4.4E-15 T 14-10-2018 Atu4100 ab0ed70203c1d79dbe1599504bb0a1fd 162 SUPERFAMILY SSF55785 46 158 1.74E-14 T 14-10-2018 IPR035965 PAS domain superfamily Atu4100 ab0ed70203c1d79dbe1599504bb0a1fd 162 Pfam PF08447 PAS fold 62 150 1.6E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Atu4376 7a4691e2cca48c9b3df7becc9dcfed50 274 Pfam PF01261 Xylose isomerase-like TIM barrel 43 226 6.1E-11 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4376 7a4691e2cca48c9b3df7becc9dcfed50 274 SUPERFAMILY SSF51658 35 253 1.41E-33 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4376 7a4691e2cca48c9b3df7becc9dcfed50 274 Gene3D G3DSA:3.20.20.150 5 268 8.6E-54 T 14-10-2018 Atu1413 bb9e95133b9a29dd5b32e7ecaaf98300 382 Gene3D G3DSA:3.40.50.2300 136 374 6.7E-107 T 14-10-2018 Atu1413 bb9e95133b9a29dd5b32e7ecaaf98300 382 SUPERFAMILY SSF53822 25 378 1.04E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu1413 bb9e95133b9a29dd5b32e7ecaaf98300 382 Pfam PF13458 Periplasmic binding protein 26 369 1.7E-46 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu1413 bb9e95133b9a29dd5b32e7ecaaf98300 382 Gene3D G3DSA:3.40.50.2300 27 363 6.7E-107 T 14-10-2018 Atu5345 126b79b951b54e153fe34194fa140576 323 SUPERFAMILY SSF161098 101 306 1.44E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu5345 126b79b951b54e153fe34194fa140576 323 Gene3D G3DSA:1.10.3720.10 93 314 2.5E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu5345 126b79b951b54e153fe34194fa140576 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 319 4.1E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 SUPERFAMILY SSF54913 5 116 1.49E-44 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 PRINTS PR00340 P-II protein signature 27 45 5.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 PRINTS PR00340 P-II protein signature 87 107 5.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 PRINTS PR00340 P-II protein signature 56 79 5.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 PRINTS PR00340 P-II protein signature 6 21 5.3E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 SMART SM00938 8 109 1.9E-65 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 1.1E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 Gene3D G3DSA:3.30.70.120 1 116 4.2E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Atu2757 cd47659cf81e77e7e53b0134b8c5bfca 116 PIRSF PIRSF039144 5 116 1.3E-52 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Atu4535 ed6e4c4140165c3ccbcbd3159f1eea65 279 SMART SM00062 44 263 1.1E-35 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4535 ed6e4c4140165c3ccbcbd3159f1eea65 279 Gene3D G3DSA:3.40.190.10 131 220 2.7E-48 T 14-10-2018 Atu4535 ed6e4c4140165c3ccbcbd3159f1eea65 279 Gene3D G3DSA:3.40.190.10 34 265 2.7E-48 T 14-10-2018 Atu4535 ed6e4c4140165c3ccbcbd3159f1eea65 279 SUPERFAMILY SSF53850 40 265 1.53E-50 T 14-10-2018 Atu4535 ed6e4c4140165c3ccbcbd3159f1eea65 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 261 1.1E-46 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu2598 1a8e3ed28b7fb42ed4456f595bd666e0 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 72 1.2E-17 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Atu2598 1a8e3ed28b7fb42ed4456f595bd666e0 287 SUPERFAMILY SSF46689 1 72 5.02E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2598 1a8e3ed28b7fb42ed4456f595bd666e0 287 Pfam PF01380 SIS domain 124 252 5.5E-16 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu2598 1a8e3ed28b7fb42ed4456f595bd666e0 287 Gene3D G3DSA:3.40.50.10490 91 274 1.1E-33 T 14-10-2018 Atu2598 1a8e3ed28b7fb42ed4456f595bd666e0 287 Gene3D G3DSA:1.10.10.10 1 77 8.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2598 1a8e3ed28b7fb42ed4456f595bd666e0 287 SUPERFAMILY SSF53697 91 256 5.66E-29 T 14-10-2018 Atu4176 a46a7f00e7d2703f277240515db9564d 261 Pfam PF13763 Domain of unknown function (DUF4167) 15 96 1.2E-32 T 14-10-2018 IPR025430 Domain of unknown function DUF4167 Atu3721 0039c2b37eb604b9dac3dbbf6e5adec4 72 Pfam PF11160 Protein of unknown function (DUF2945) 7 62 1.2E-8 T 14-10-2018 IPR021331 Protein of unknown function DUF2945 Atu1899 6aba0893cb60b0545c96ed3a7d8cc733 309 Gene3D G3DSA:3.40.50.2300 129 263 1.1E-71 T 14-10-2018 Atu1899 6aba0893cb60b0545c96ed3a7d8cc733 309 Pfam PF13407 Periplasmic binding protein domain 29 284 4.4E-52 T 14-10-2018 IPR025997 Periplasmic binding protein Atu1899 6aba0893cb60b0545c96ed3a7d8cc733 309 SUPERFAMILY SSF53822 12 305 7.81E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu1899 6aba0893cb60b0545c96ed3a7d8cc733 309 Gene3D G3DSA:3.40.50.2300 30 285 1.1E-71 T 14-10-2018 Atu2179 b1a84d2467c60d05e27c9621c58c2f76 379 SUPERFAMILY SSF55073 226 374 2.43E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2179 b1a84d2467c60d05e27c9621c58c2f76 379 Gene3D G3DSA:3.30.70.270 215 376 7.4E-51 T 14-10-2018 Atu2179 b1a84d2467c60d05e27c9621c58c2f76 379 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 374 1.7E-45 T 14-10-2018 IPR000160 GGDEF domain Atu2179 b1a84d2467c60d05e27c9621c58c2f76 379 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 371 1.6E-41 T 14-10-2018 IPR000160 GGDEF domain Atu2179 b1a84d2467c60d05e27c9621c58c2f76 379 SMART SM00267 210 376 4.9E-54 T 14-10-2018 IPR000160 GGDEF domain Atu2607 e25d4e7f3e0a642833a9931e5186295b 340 Pfam PF01380 SIS domain 201 294 1.8E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu2607 e25d4e7f3e0a642833a9931e5186295b 340 Pfam PF01380 SIS domain 42 163 1.0E-14 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu2607 e25d4e7f3e0a642833a9931e5186295b 340 Gene3D G3DSA:3.40.50.10490 1 189 9.0E-46 T 14-10-2018 Atu2607 e25d4e7f3e0a642833a9931e5186295b 340 Gene3D G3DSA:3.40.50.10490 190 325 2.1E-41 T 14-10-2018 Atu2607 e25d4e7f3e0a642833a9931e5186295b 340 SUPERFAMILY SSF53697 5 338 1.64E-65 T 14-10-2018 Atu3814 49fd8519babb6cb879a360bd30ab5d56 109 SUPERFAMILY SSF54909 1 108 1.7E-34 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3814 49fd8519babb6cb879a360bd30ab5d56 109 Pfam PF05336 L-rhamnose mutarotase 3 108 1.3E-36 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 Atu3814 49fd8519babb6cb879a360bd30ab5d56 109 Gene3D G3DSA:3.30.70.100 1 94 2.9E-29 T 14-10-2018 Atu4209 87e8027a6c8e093ba30921d9b1de78d1 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 284 1.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4209 87e8027a6c8e093ba30921d9b1de78d1 303 Gene3D G3DSA:1.10.3720.10 53 294 2.7E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu4209 87e8027a6c8e093ba30921d9b1de78d1 303 SUPERFAMILY SSF160964 10 47 5.36E-7 T 14-10-2018 Atu4209 87e8027a6c8e093ba30921d9b1de78d1 303 SUPERFAMILY SSF161098 57 284 2.88E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu3619 1ff3afbed8238bd94b36b06deb8afae7 111 Gene3D G3DSA:2.160.20.100 6 106 8.3E-21 T 14-10-2018 Atu3619 1ff3afbed8238bd94b36b06deb8afae7 111 SUPERFAMILY SSF141571 13 104 6.41E-20 T 14-10-2018 Atu3619 1ff3afbed8238bd94b36b06deb8afae7 111 Pfam PF13599 Pentapeptide repeats (9 copies) 16 84 5.4E-13 T 14-10-2018 IPR001646 Pentapeptide repeat Atu4424 38cc5a288aa6439b28bda18ad3bcd840 341 SMART SM00382 31 214 3.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4424 38cc5a288aa6439b28bda18ad3bcd840 341 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4424 38cc5a288aa6439b28bda18ad3bcd840 341 Pfam PF00005 ABC transporter 23 164 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4424 38cc5a288aa6439b28bda18ad3bcd840 341 Gene3D G3DSA:3.40.50.300 1 240 6.6E-79 T 14-10-2018 Atu4424 38cc5a288aa6439b28bda18ad3bcd840 341 SUPERFAMILY SSF52540 7 244 2.66E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu8065 8809edb272e70123e520999fff163b03 68 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 8 66 16.769 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8065 8809edb272e70123e520999fff163b03 68 PIRSF PIRSF002211 1 68 2.2E-22 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8065 8809edb272e70123e520999fff163b03 68 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 12 66 2.4E-24 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu8065 8809edb272e70123e520999fff163b03 68 Pfam PF00327 Ribosomal protein L30p/L7e 14 62 2.5E-13 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Atu8065 8809edb272e70123e520999fff163b03 68 SUPERFAMILY SSF55129 10 64 1.44E-17 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Atu8065 8809edb272e70123e520999fff163b03 68 Gene3D G3DSA:3.30.1390.20 8 65 1.3E-20 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Atu3315 f3a59fcdfcf2e4293f3577c0ed379547 327 Gene3D G3DSA:3.90.25.10 174 307 1.7E-124 T 14-10-2018 Atu3315 f3a59fcdfcf2e4293f3577c0ed379547 327 Gene3D G3DSA:3.40.50.720 5 253 1.7E-124 T 14-10-2018 Atu3315 f3a59fcdfcf2e4293f3577c0ed379547 327 SUPERFAMILY SSF51735 1 315 1.29E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3315 f3a59fcdfcf2e4293f3577c0ed379547 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 253 5.0E-56 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu3315 f3a59fcdfcf2e4293f3577c0ed379547 327 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 317 1.0E-117 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 SMART SM00422 12 80 6.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 SUPERFAMILY SSF46955 16 122 4.76E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 Pfam PF13411 MerR HTH family regulatory protein 16 79 1.3E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 3.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 3.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 3.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Atu3658 fcd1b5059ca53c8b40f71464837e64cf 361 Gene3D G3DSA:1.10.1660.10 12 149 8.8E-23 T 14-10-2018 Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 488 1.7E-150 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 Pfam PF03796 DnaB-like helicase C terminal domain 199 486 2.0E-100 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 SMART SM00382 216 435 7.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 Gene3D G3DSA:3.40.50.300 183 491 9.3E-103 T 14-10-2018 Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 SUPERFAMILY SSF52540 197 479 5.13E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 Gene3D G3DSA:1.10.860.10 16 180 3.7E-36 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 8.3E-26 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Atu1084 5f96e516549ce40e2b723f5291bf1a88 498 SUPERFAMILY SSF48024 19 130 9.42E-30 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Atu4281 25496f275793c766eba50ae3c3fafc09 235 SUPERFAMILY SSF161098 19 213 2.09E-34 T 14-10-2018 IPR035906 MetI-like superfamily Atu4281 25496f275793c766eba50ae3c3fafc09 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 227 1.3E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4281 25496f275793c766eba50ae3c3fafc09 235 Gene3D G3DSA:1.10.3720.10 10 228 2.7E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu4281 25496f275793c766eba50ae3c3fafc09 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 122 2.9E-14 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1149 9ea3d3c24a13a1c162360da66e54e0b5 342 SMART SM00044 126 316 6.5E-5 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Atu1149 9ea3d3c24a13a1c162360da66e54e0b5 342 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 158 329 3.7E-19 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Atu1149 9ea3d3c24a13a1c162360da66e54e0b5 342 SUPERFAMILY SSF55073 149 334 1.1E-41 T 14-10-2018 IPR029787 Nucleotide cyclase Atu1149 9ea3d3c24a13a1c162360da66e54e0b5 342 Gene3D G3DSA:3.30.70.1230 152 341 7.2E-32 T 14-10-2018 IPR029787 Nucleotide cyclase Atu2254 ab9c4eadf3309c0b1e112f030d190c02 304 Pfam PF01882 Protein of unknown function DUF58 54 140 1.6E-17 T 14-10-2018 IPR002881 Domain of unknown function DUF58 Atu4617 946d920e67d219fe7d6924bf0f687028 351 Gene3D G3DSA:3.90.25.10 200 328 5.4E-130 T 14-10-2018 Atu4617 946d920e67d219fe7d6924bf0f687028 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 6.3E-147 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Atu4617 946d920e67d219fe7d6924bf0f687028 351 SUPERFAMILY SSF51735 1 333 7.33E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4617 946d920e67d219fe7d6924bf0f687028 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 1.3E-95 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu4617 946d920e67d219fe7d6924bf0f687028 351 Gene3D G3DSA:3.40.50.720 2 320 5.4E-130 T 14-10-2018 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 2.3E-27 T 14-10-2018 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 2.3E-27 T 14-10-2018 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 2.3E-27 T 14-10-2018 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 2.3E-27 T 14-10-2018 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 2.3E-27 T 14-10-2018 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 Pfam PF00375 Sodium:dicarboxylate symporter family 20 412 5.7E-110 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 SUPERFAMILY SSF118215 20 413 6.28E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 Gene3D G3DSA:1.10.3860.10 7 430 1.1E-125 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 439 38.964 T 14-10-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 Atu3298 a7bd833db6aa23bde20e55fe69f32c2b 448 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 14-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Atu8083 9ab64dcbfe4bc3c70403dc76febc4175 270 SUPERFAMILY SSF46689 27 81 1.49E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0967 050bb61c08512757668c91925d38a98b 1266 SUPERFAMILY SSF51445 322 700 1.16E-9 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Atu0967 050bb61c08512757668c91925d38a98b 1266 Pfam PF13550 Putative phage tail protein 758 923 1.2E-35 T 14-10-2018 IPR032876 Tip attachment protein J Atu0967 050bb61c08512757668c91925d38a98b 1266 Pfam PF13547 GTA TIM-barrel-like domain 410 698 4.8E-132 T 14-10-2018 IPR025195 GTA TIM-barrel-like domain Atu2290 e57538e948cb77c1ca35e8068562729e 169 Pfam PF00583 Acetyltransferase (GNAT) family 39 141 3.3E-18 T 14-10-2018 IPR000182 GNAT domain Atu2290 e57538e948cb77c1ca35e8068562729e 169 Gene3D G3DSA:3.40.630.30 1 169 3.9E-56 T 14-10-2018 Atu2290 e57538e948cb77c1ca35e8068562729e 169 SUPERFAMILY SSF55729 4 167 2.19E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0644 323a29a0e5d34e890ca61d3772a45884 717 Pfam PF05746 DALR anticodon binding domain 607 704 6.4E-8 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 4.0E-17 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 260 275 4.0E-17 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 4.0E-17 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 335 351 4.0E-17 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 715 24.105 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 SUPERFAMILY SSF109604 389 537 5.84E-16 T 14-10-2018 Atu0644 323a29a0e5d34e890ca61d3772a45884 717 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 574 6.1E-193 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Atu4433 5fbf933848794c0b268b92ebb84d52cc 310 Gene3D G3DSA:1.10.3720.10 95 304 8.5E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu4433 5fbf933848794c0b268b92ebb84d52cc 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 83 1.8E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu4433 5fbf933848794c0b268b92ebb84d52cc 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 306 1.1E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4433 5fbf933848794c0b268b92ebb84d52cc 310 SUPERFAMILY SSF161098 102 289 1.19E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu2028 66886f50a5605399f9bfd587984738de 124 SUPERFAMILY SSF46785 7 105 1.89E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2028 66886f50a5605399f9bfd587984738de 124 Gene3D G3DSA:1.10.10.10 6 116 5.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2028 66886f50a5605399f9bfd587984738de 124 Pfam PF12840 Helix-turn-helix domain 15 73 1.4E-12 T 14-10-2018 Atu2028 66886f50a5605399f9bfd587984738de 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2028 66886f50a5605399f9bfd587984738de 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2028 66886f50a5605399f9bfd587984738de 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu2028 66886f50a5605399f9bfd587984738de 124 SMART SM00418 15 89 1.9E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Atu0181 340e54289cd17b32140eb284eccbf2e9 153 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 10 152 1.7E-52 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu0181 340e54289cd17b32140eb284eccbf2e9 153 Pfam PF06754 Phosphonate metabolism protein PhnG 11 151 6.1E-51 T 14-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Atu1063 47db338e0386c29b91dc7e506b450f7f 232 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 13 221 39.83 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Atu1063 47db338e0386c29b91dc7e506b450f7f 232 Pfam PF02666 Phosphatidylserine decarboxylase 46 217 6.7E-34 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Atu1063 47db338e0386c29b91dc7e506b450f7f 232 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 16 221 1.4E-60 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Atu4139 d320a38bbccc127ea267a1a454e6dcc9 136 TIGRFAM TIGR02588 TIGR02588: TIGR02588 family protein 16 136 1.9E-56 T 14-10-2018 IPR013417 Conserved hypothetical protein CHP02588 Atu3137 4edc492776ac9bdd867ca361e42f044a 325 Gene3D G3DSA:3.40.190.170 27 325 2.2E-114 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu3137 4edc492776ac9bdd867ca361e42f044a 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 37 282 1.4E-70 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3137 4edc492776ac9bdd867ca361e42f044a 325 PIRSF PIRSF006470 1 325 6.0E-97 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3137 4edc492776ac9bdd867ca361e42f044a 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 308 2.1E-89 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu3696 653f7c7a26ed2ab22c8323fc39eeb87e 62 Pfam PF03966 Trm112p-like protein 9 48 1.3E-9 T 14-10-2018 IPR005651 Trm112-like Atu3696 653f7c7a26ed2ab22c8323fc39eeb87e 62 Gene3D G3DSA:2.20.25.10 15 62 5.2E-23 T 14-10-2018 Atu3696 653f7c7a26ed2ab22c8323fc39eeb87e 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 8 61 26.881 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 Atu3696 653f7c7a26ed2ab22c8323fc39eeb87e 62 SUPERFAMILY SSF158997 8 61 1.09E-19 T 14-10-2018 Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.6E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 SUPERFAMILY SSF51735 6 246 9.55E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 2.4E-62 T 14-10-2018 Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 1.1E-4 T 14-10-2018 Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 Gene3D G3DSA:3.40.50.720 1 248 3.0E-83 T 14-10-2018 Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3026 ed4b57f6bef1c0260ae96ce0c178415a 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1286 4a2468481b2d37ea3900be35f21b671f 89 Pfam PF07330 Protein of unknown function (DUF1467) 1 82 9.6E-29 T 14-10-2018 IPR009935 Protein of unknown function DUF1467 Atu3865 9b4445a961b3e4746ea60009a525bedb 1108 SMART SM00460 173 249 1.6E-19 T 14-10-2018 IPR002931 Transglutaminase-like Atu3865 9b4445a961b3e4746ea60009a525bedb 1108 Gene3D G3DSA:3.10.620.30 96 284 3.4E-27 T 14-10-2018 Atu3865 9b4445a961b3e4746ea60009a525bedb 1108 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 280 1103 0.0 T 14-10-2018 IPR018667 Domain of unknown function DUF2126 Atu3865 9b4445a961b3e4746ea60009a525bedb 1108 Pfam PF01841 Transglutaminase-like superfamily 134 247 4.8E-20 T 14-10-2018 IPR002931 Transglutaminase-like Atu3865 9b4445a961b3e4746ea60009a525bedb 1108 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 5.7E-27 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Atu3865 9b4445a961b3e4746ea60009a525bedb 1108 SUPERFAMILY SSF54001 9 339 4.07E-71 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Atu5452 38a33256d0b9574c1eae125eb8cbc905 219 SUPERFAMILY SSF52540 2 217 1.64E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5452 38a33256d0b9574c1eae125eb8cbc905 219 SMART SM00382 31 216 7.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5452 38a33256d0b9574c1eae125eb8cbc905 219 Gene3D G3DSA:3.40.50.300 1 219 1.3E-58 T 14-10-2018 Atu5452 38a33256d0b9574c1eae125eb8cbc905 219 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5452 38a33256d0b9574c1eae125eb8cbc905 219 Pfam PF00005 ABC transporter 22 167 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1754 8acdc1f6fb1c5df0e0fb6e3ed9f07ff1 198 PIRSF PIRSF031878 1 198 1.9E-73 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 Atu1754 8acdc1f6fb1c5df0e0fb6e3ed9f07ff1 198 Pfam PF07310 PAS domain 14 150 4.2E-50 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 Atu5426 0ed8bfea9a8ead14e3b1225ec2274da9 168 SUPERFAMILY SSF69118 21 167 2.62E-17 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu5426 0ed8bfea9a8ead14e3b1225ec2274da9 168 Gene3D G3DSA:1.20.1290.10 52 168 1.2E-10 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Gene3D G3DSA:1.25.40.10 32 208 4.1E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Pfam PF08238 Sel1 repeat 271 304 0.036 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Pfam PF08238 Sel1 repeat 232 268 4.6 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Pfam PF08238 Sel1 repeat 306 335 0.22 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Pfam PF08238 Sel1 repeat 218 230 110.0 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Pfam PF08238 Sel1 repeat 124 159 3.5E-5 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Pfam PF08238 Sel1 repeat 160 195 0.05 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 Gene3D G3DSA:1.25.40.10 209 370 1.6E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SMART SM00671 232 268 0.4 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SMART SM00671 305 340 14.0 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SMART SM00671 124 159 2.1E-7 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SMART SM00671 269 304 0.72 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SMART SM00671 196 231 37.0 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SMART SM00671 160 195 0.0044 T 14-10-2018 IPR006597 Sel1-like repeat Atu3749 8d2b174d4f3dd24eaf3443b4886eee6b 370 SUPERFAMILY SSF81901 99 342 9.59E-46 T 14-10-2018 Atu0340 78fdf8e02b7bbedd6b722c2a0adf5905 309 SUPERFAMILY SSF53335 12 279 2.43E-61 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0340 78fdf8e02b7bbedd6b722c2a0adf5905 309 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 107 220 8.7E-10 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Atu0340 78fdf8e02b7bbedd6b722c2a0adf5905 309 Gene3D G3DSA:2.60.40.1180 23 88 3.0E-118 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Atu0340 78fdf8e02b7bbedd6b722c2a0adf5905 309 Gene3D G3DSA:3.40.50.150 89 306 3.0E-118 T 14-10-2018 Atu3571 0c87f966425818d7d855b3980dd89a1c 237 Pfam PF07812 TfuA-like protein 48 165 9.1E-41 T 14-10-2018 IPR012924 TfuA-like, core Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 Pfam PF00005 ABC transporter 29 170 4.2E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 SUPERFAMILY SSF50331 247 368 3.17E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 SUPERFAMILY SSF52540 13 251 7.23E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 Gene3D G3DSA:2.40.50.940 231 362 1.4E-10 T 14-10-2018 Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 Gene3D G3DSA:2.40.50.140 294 354 1.4E-10 T 14-10-2018 Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 Gene3D G3DSA:3.40.50.300 12 230 3.4E-65 T 14-10-2018 Atu5410 b701c6c7661ae4c9947e0b34e9b04deb 371 SMART SM00382 37 220 2.8E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1630 a07909764ba954898c303ccac252dfb7 518 Gene3D G3DSA:3.30.870.10 54 255 6.6E-34 T 14-10-2018 Atu1630 a07909764ba954898c303ccac252dfb7 518 SMART SM00155 408 435 0.0074 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atu1630 a07909764ba954898c303ccac252dfb7 518 SMART SM00155 172 199 4.4E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Atu1630 a07909764ba954898c303ccac252dfb7 518 Pfam PF13091 PLD-like domain 320 461 5.2E-22 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atu1630 a07909764ba954898c303ccac252dfb7 518 Pfam PF13091 PLD-like domain 83 231 1.8E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Atu1630 a07909764ba954898c303ccac252dfb7 518 Gene3D G3DSA:3.30.870.10 301 485 1.5E-34 T 14-10-2018 Atu1630 a07909764ba954898c303ccac252dfb7 518 SUPERFAMILY SSF56024 57 244 1.44E-37 T 14-10-2018 Atu1630 a07909764ba954898c303ccac252dfb7 518 SUPERFAMILY SSF56024 280 472 1.05E-31 T 14-10-2018 Atu0971 c6722db28633562031d1996c54aae4bf 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 9.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0971 c6722db28633562031d1996c54aae4bf 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 9.8E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Atu0971 c6722db28633562031d1996c54aae4bf 466 SUPERFAMILY SSF47384 228 301 4.51E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Atu0971 c6722db28633562031d1996c54aae4bf 466 SUPERFAMILY SSF55874 309 460 3.93E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0971 c6722db28633562031d1996c54aae4bf 466 Gene3D G3DSA:1.10.287.130 193 295 1.1E-8 T 14-10-2018 Atu0971 c6722db28633562031d1996c54aae4bf 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 447 1.4E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu0971 c6722db28633562031d1996c54aae4bf 466 SMART SM00388 245 302 0.003 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Atu0971 c6722db28633562031d1996c54aae4bf 466 Gene3D G3DSA:3.30.565.10 307 462 1.8E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu0971 c6722db28633562031d1996c54aae4bf 466 SMART SM00387 345 462 1.6E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Atu3345 d06d8be8f3850a28c9a69e172eb3aeb0 118 Gene3D G3DSA:3.30.479.10 1 118 3.6E-37 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Atu3345 d06d8be8f3850a28c9a69e172eb3aeb0 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 3.7E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Atu3345 d06d8be8f3850a28c9a69e172eb3aeb0 118 PIRSF PIRSF006113 1 118 2.3E-27 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Atu3345 d06d8be8f3850a28c9a69e172eb3aeb0 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 95 1.5E-29 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Atu3345 d06d8be8f3850a28c9a69e172eb3aeb0 118 SUPERFAMILY SSF55620 1 117 2.56E-36 T 14-10-2018 Atu4703 79ab43d26339953e1a8d3a941d209432 209 Pfam PF01613 Flavin reductase like domain 23 175 4.7E-19 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu4703 79ab43d26339953e1a8d3a941d209432 209 SUPERFAMILY SSF50475 2 193 5.4E-46 T 14-10-2018 Atu4703 79ab43d26339953e1a8d3a941d209432 209 SMART SM00903 20 171 6.0E-15 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu4703 79ab43d26339953e1a8d3a941d209432 209 Gene3D G3DSA:2.30.110.10 1 204 1.2E-64 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu1815 56be8a2e7e82f13f8604df4433eba873 432 SUPERFAMILY SSF111369 79 328 9.15E-26 T 14-10-2018 Atu1815 56be8a2e7e82f13f8604df4433eba873 432 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 324 1.3E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu1815 56be8a2e7e82f13f8604df4433eba873 432 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 348 2.1E-47 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu2411 62fff62c1c62505c3b00b0a9f2de8eb2 253 Pfam PF00005 ABC transporter 28 183 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2411 62fff62c1c62505c3b00b0a9f2de8eb2 253 SUPERFAMILY SSF52540 12 251 1.33E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2411 62fff62c1c62505c3b00b0a9f2de8eb2 253 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 12 253 3.3E-116 T 14-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD Atu2411 62fff62c1c62505c3b00b0a9f2de8eb2 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 252 6.6E-5 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu2411 62fff62c1c62505c3b00b0a9f2de8eb2 253 Gene3D G3DSA:3.40.50.300 7 253 3.0E-53 T 14-10-2018 Atu0703 6f2cda8772ae1fd2223e868857f45341 209 SUPERFAMILY SSF51569 8 204 1.43E-52 T 14-10-2018 Atu0703 6f2cda8772ae1fd2223e868857f45341 209 Pfam PF01081 KDPG and KHG aldolase 11 184 6.5E-26 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Atu0703 6f2cda8772ae1fd2223e868857f45341 209 Gene3D G3DSA:3.20.20.70 8 205 2.9E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0703 6f2cda8772ae1fd2223e868857f45341 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Atu2502 a7e84ba8155ef619959ce6d4f0250db0 203 Pfam PF01126 Heme oxygenase 19 195 2.3E-20 T 14-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Atu2502 a7e84ba8155ef619959ce6d4f0250db0 203 SUPERFAMILY SSF48613 16 197 6.35E-54 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Atu2502 a7e84ba8155ef619959ce6d4f0250db0 203 Gene3D G3DSA:1.20.910.10 6 201 5.2E-51 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Atu3693 b0ceee3a60b0ce7ea64548e0785fb9cd 323 Gene3D G3DSA:3.55.50.30 249 321 6.7E-6 T 14-10-2018 Atu3693 b0ceee3a60b0ce7ea64548e0785fb9cd 323 PIRSF PIRSF018266 8 323 1.3E-79 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Atu3693 b0ceee3a60b0ce7ea64548e0785fb9cd 323 Pfam PF16220 Domain of unknown function (DUF4880) 19 60 5.1E-9 T 14-10-2018 IPR032623 FecR, N-terminal Atu3693 b0ceee3a60b0ce7ea64548e0785fb9cd 323 Pfam PF04773 FecR protein 117 207 8.7E-20 T 14-10-2018 IPR006860 FecR protein Atu3693 b0ceee3a60b0ce7ea64548e0785fb9cd 323 Pfam PF16344 Domain of unknown function (DUF4974) 228 315 7.3E-10 T 14-10-2018 IPR032508 Protein FecR, C-terminal Atu3693 b0ceee3a60b0ce7ea64548e0785fb9cd 323 Gene3D G3DSA:2.60.120.1440 110 248 9.9E-26 T 14-10-2018 Atu1368 7ee8f4f7b090a431a7f5edbf4610cc17 283 PIRSF PIRSF006487 44 255 1.6E-8 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Atu1368 7ee8f4f7b090a431a7f5edbf4610cc17 283 Pfam PF09347 Domain of unknown function (DUF1989) 51 231 2.5E-61 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 Atu3287 81b8c0ad1dd2b7b4f58a802ac128cd16 298 Gene3D G3DSA:3.40.190.10 90 190 4.5E-72 T 14-10-2018 Atu3287 81b8c0ad1dd2b7b4f58a802ac128cd16 298 Pfam PF09084 NMT1/THI5 like 18 230 1.4E-70 T 14-10-2018 IPR015168 SsuA/THI5-like Atu3287 81b8c0ad1dd2b7b4f58a802ac128cd16 298 Gene3D G3DSA:3.40.190.10 8 282 4.5E-72 T 14-10-2018 Atu3287 81b8c0ad1dd2b7b4f58a802ac128cd16 298 SUPERFAMILY SSF53850 11 289 8.53E-47 T 14-10-2018 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 Gene3D G3DSA:3.40.50.170 1 208 4.6E-69 T 14-10-2018 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 305 33.786 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 303 5.5E-75 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 Gene3D G3DSA:3.10.25.10 209 311 2.0E-22 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 Pfam PF02911 Formyl transferase, C-terminal domain 206 301 8.0E-23 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 SUPERFAMILY SSF53328 3 209 1.23E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 SUPERFAMILY SSF50486 207 310 1.19E-25 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Atu0367 c60d7a09bbe4d9fa6bc9a04181e49f78 311 Pfam PF00551 Formyl transferase 4 181 6.0E-36 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Atu4841 365cccaa6f6acd044ff588f0ce971873 243 SMART SM00420 10 59 0.0042 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu4841 365cccaa6f6acd044ff588f0ce971873 243 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Atu4841 365cccaa6f6acd044ff588f0ce971873 243 Pfam PF00455 DeoR C terminal sensor domain 79 237 1.9E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain Atu4841 365cccaa6f6acd044ff588f0ce971873 243 SUPERFAMILY SSF100950 80 238 6.38E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu4841 365cccaa6f6acd044ff588f0ce971873 243 SMART SM01134 77 238 2.4E-62 T 14-10-2018 Atu4841 365cccaa6f6acd044ff588f0ce971873 243 Pfam PF08220 DeoR-like helix-turn-helix domain 10 45 2.3E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Atu2720 8c2bdf7e18953caddece6dd46aea9471 263 Pfam PF00912 Transglycosylase 85 231 8.2E-44 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2720 8c2bdf7e18953caddece6dd46aea9471 263 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 47 257 36.739 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2720 8c2bdf7e18953caddece6dd46aea9471 263 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 55 253 2.0E-58 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2720 8c2bdf7e18953caddece6dd46aea9471 263 Gene3D G3DSA:1.10.3810.10 79 254 3.8E-44 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Atu2720 8c2bdf7e18953caddece6dd46aea9471 263 SUPERFAMILY SSF53955 84 244 1.27E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu4020 8648c67dc98f1c2f1195b4225375a46f 548 SUPERFAMILY SSF53649 269 493 8.5E-18 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atu4020 8648c67dc98f1c2f1195b4225375a46f 548 Gene3D G3DSA:3.40.720.10 231 546 1.2E-84 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atu4020 8648c67dc98f1c2f1195b4225375a46f 548 Pfam PF08019 Domain of unknown function (DUF1705) 60 207 1.3E-44 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 Atu4020 8648c67dc98f1c2f1195b4225375a46f 548 Pfam PF00884 Sulfatase 238 525 3.3E-47 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Atu4402 732093de28c12e7a84716c85460d68d1 269 Gene3D G3DSA:1.10.3720.10 47 253 7.7E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu4402 732093de28c12e7a84716c85460d68d1 269 SUPERFAMILY SSF161098 61 244 6.41E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu4402 732093de28c12e7a84716c85460d68d1 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 256 3.6E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 PIRSF PIRSF039085 6 259 1.1E-106 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 TIGRFAM TIGR03005 ectoine_ehuA: ectoine/hydroxyectoine ABC transporter, ATP-binding protein EhuA 10 258 1.0E-141 T 14-10-2018 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 SMART SM00382 34 231 1.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 SUPERFAMILY SSF52540 9 253 2.84E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 Pfam PF00005 ABC transporter 25 182 1.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4752 a4ae5b0903cbeeb995aba9f74e0aa74b 259 Gene3D G3DSA:3.40.50.300 7 259 1.6E-76 T 14-10-2018 Atu1677 2bb0952279a824301c233fcc0f280611 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 367 53.729 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atu1677 2bb0952279a824301c233fcc0f280611 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 366 2.3E-144 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atu1677 2bb0952279a824301c233fcc0f280611 376 SUPERFAMILY SSF51713 5 366 2.75E-150 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atu1677 2bb0952279a824301c233fcc0f280611 376 Gene3D G3DSA:3.20.20.105 1 370 1.2E-153 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atu1677 2bb0952279a824301c233fcc0f280611 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 363 2.0E-85 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atu1677 2bb0952279a824301c233fcc0f280611 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 367 4.6E-139 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Atu2341 215bd69ee3edc653050455b58ec05e4d 198 Pfam PF13489 Methyltransferase domain 31 137 1.1E-11 T 14-10-2018 Atu2341 215bd69ee3edc653050455b58ec05e4d 198 SUPERFAMILY SSF53335 11 182 2.09E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2341 215bd69ee3edc653050455b58ec05e4d 198 Gene3D G3DSA:3.40.50.150 1 198 4.7E-66 T 14-10-2018 Atu6016 d3a16de7768102c203f2944b9b7e19a1 371 SUPERFAMILY SSF51735 29 362 2.45E-99 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu6016 d3a16de7768102c203f2944b9b7e19a1 371 Gene3D G3DSA:3.30.1780.10 42 357 1.1E-131 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Atu6016 d3a16de7768102c203f2944b9b7e19a1 371 Gene3D G3DSA:3.40.50.720 151 319 1.1E-131 T 14-10-2018 Atu6016 d3a16de7768102c203f2944b9b7e19a1 371 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 33 338 3.1E-132 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Atu4615 6b7201afe11f7f5c37317ed84071e6a3 288 SUPERFAMILY SSF53448 1 285 4.06E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4615 6b7201afe11f7f5c37317ed84071e6a3 288 Gene3D G3DSA:3.90.550.10 1 288 1.3E-81 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4615 6b7201afe11f7f5c37317ed84071e6a3 288 Pfam PF00483 Nucleotidyl transferase 2 237 1.8E-68 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atu4615 6b7201afe11f7f5c37317ed84071e6a3 288 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.0E-148 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Atu3138 de931c7fc431d991353f28dbce7b3f04 292 Gene3D G3DSA:3.20.20.140 4 292 7.5E-74 T 14-10-2018 Atu3138 de931c7fc431d991353f28dbce7b3f04 292 Pfam PF04909 Amidohydrolase 49 286 1.1E-26 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu3138 de931c7fc431d991353f28dbce7b3f04 292 SUPERFAMILY SSF51556 18 286 1.13E-55 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3186 561baec042da7f632aa0dd3433456f81 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 290 8.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3186 561baec042da7f632aa0dd3433456f81 293 Gene3D G3DSA:1.10.3720.10 50 291 1.8E-59 T 14-10-2018 IPR035906 MetI-like superfamily Atu3186 561baec042da7f632aa0dd3433456f81 293 SUPERFAMILY SSF161098 54 280 2.09E-52 T 14-10-2018 IPR035906 MetI-like superfamily Atu4567 9f7e7baaf6a00c7612185053e095a628 382 Pfam PF00480 ROK family 90 247 6.1E-16 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu4567 9f7e7baaf6a00c7612185053e095a628 382 Gene3D G3DSA:3.30.420.40 260 379 7.0E-6 T 14-10-2018 Atu4567 9f7e7baaf6a00c7612185053e095a628 382 Gene3D G3DSA:1.10.10.10 6 82 6.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4567 9f7e7baaf6a00c7612185053e095a628 382 SUPERFAMILY SSF53067 88 377 1.3E-37 T 14-10-2018 Atu4567 9f7e7baaf6a00c7612185053e095a628 382 SUPERFAMILY SSF46785 18 79 5.4E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu4567 9f7e7baaf6a00c7612185053e095a628 382 Gene3D G3DSA:3.30.420.40 212 250 3.1E-34 T 14-10-2018 Atu4567 9f7e7baaf6a00c7612185053e095a628 382 Gene3D G3DSA:3.30.420.40 96 211 3.1E-34 T 14-10-2018 Atu1701 c922a59586abf09b1aa57b5ef6781a34 213 SUPERFAMILY SSF53335 14 209 1.17E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1701 c922a59586abf09b1aa57b5ef6781a34 213 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 131 146 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Atu1701 c922a59586abf09b1aa57b5ef6781a34 213 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 208 1.2E-38 T 14-10-2018 Atu1701 c922a59586abf09b1aa57b5ef6781a34 213 Gene3D G3DSA:3.40.50.150 2 212 9.8E-49 T 14-10-2018 Atu5080 d00308a8a0ee059c9ecfee0e8897450c 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 300 9.5E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5080 d00308a8a0ee059c9ecfee0e8897450c 311 SUPERFAMILY SSF161098 70 298 6.54E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu5080 d00308a8a0ee059c9ecfee0e8897450c 311 Gene3D G3DSA:1.10.3720.10 66 307 5.8E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 Pfam PF13641 Glycosyltransferase like family 2 117 346 1.4E-31 T 14-10-2018 Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 SUPERFAMILY SSF53448 109 400 1.27E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 Gene3D G3DSA:3.90.550.10 109 331 4.1E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 PRINTS PR01439 Cellulose synthase subunit A signature 442 461 1.6E-8 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 PRINTS PR01439 Cellulose synthase subunit A signature 516 537 1.6E-8 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 PRINTS PR01439 Cellulose synthase subunit A signature 39 59 1.6E-8 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 PRINTS PR01439 Cellulose synthase subunit A signature 127 146 1.6E-8 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu5090 00f3bf7eca350775f5ac323e4839e1c0 657 PRINTS PR01439 Cellulose synthase subunit A signature 369 395 1.6E-8 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 Atu4164 391f94dcb8aedcf58aa2001ce7da39a0 579 SMART SM00911 382 463 4.0E-21 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu4164 391f94dcb8aedcf58aa2001ce7da39a0 579 SUPERFAMILY SSF55874 461 564 8.53E-5 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu4164 391f94dcb8aedcf58aa2001ce7da39a0 579 Pfam PF07536 HWE histidine kinase 382 462 5.7E-16 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu4164 391f94dcb8aedcf58aa2001ce7da39a0 579 Gene3D G3DSA:3.30.565.10 439 570 2.4E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu2498 4d4412100838b715f4f62b5d5b4f7225 128 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 44.739 T 14-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC Atu2498 4d4412100838b715f4f62b5d5b4f7225 128 Gene3D G3DSA:3.30.1330.40 1 128 7.0E-41 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu2498 4d4412100838b715f4f62b5d5b4f7225 128 Pfam PF01042 Endoribonuclease L-PSP 13 125 3.7E-32 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Atu2498 4d4412100838b715f4f62b5d5b4f7225 128 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 3.7E-79 T 14-10-2018 IPR019898 Putative aminoacrylate peracid reductase RutC Atu2498 4d4412100838b715f4f62b5d5b4f7225 128 SUPERFAMILY SSF55298 2 127 3.14E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 Pfam PF00700 Bacterial flagellin C-terminal helical region 227 311 1.1E-16 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 Gene3D G3DSA:1.20.1330.10 44 172 1.5E-19 T 14-10-2018 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 Gene3D G3DSA:1.10.8.410 264 312 2.3E-5 T 14-10-2018 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 137 6.3E-31 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 SUPERFAMILY SSF64518 1 312 4.84E-64 T 14-10-2018 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 PRINTS PR00207 Flagellin signature 36 53 3.2E-6 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 PRINTS PR00207 Flagellin signature 107 130 3.2E-6 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Atu0542 2be0ddd612c5bcec98a277a24e10f6d2 313 Gene3D G3DSA:1.20.58.1830 5 32 1.5E-19 T 14-10-2018 Atu2591 c50fcc6f94288fa3b9855f92e31a2787 375 SUPERFAMILY SSF53756 52 369 2.09E-58 T 14-10-2018 Atu2591 c50fcc6f94288fa3b9855f92e31a2787 375 Gene3D G3DSA:3.40.50.2000 166 355 1.2E-51 T 14-10-2018 Atu2591 c50fcc6f94288fa3b9855f92e31a2787 375 Pfam PF00534 Glycosyl transferases group 1 186 349 6.4E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu2591 c50fcc6f94288fa3b9855f92e31a2787 375 Gene3D G3DSA:3.40.50.2000 45 165 1.2E-51 T 14-10-2018 Atu2381 84a38930f280fbb48635e8a106cdfa10 121 Pfam PF04241 Protein of unknown function (DUF423) 24 101 1.7E-6 T 14-10-2018 IPR006696 Protein of unknown function DUF423 Atu4262 a7da9e1a6357855cea2856199171b17b 309 Gene3D G3DSA:3.40.190.10 5 299 5.9E-94 T 14-10-2018 Atu4262 a7da9e1a6357855cea2856199171b17b 309 Pfam PF09084 NMT1/THI5 like 8 229 8.5E-25 T 14-10-2018 IPR015168 SsuA/THI5-like Atu4262 a7da9e1a6357855cea2856199171b17b 309 Gene3D G3DSA:3.40.190.10 80 191 5.9E-94 T 14-10-2018 Atu4262 a7da9e1a6357855cea2856199171b17b 309 SUPERFAMILY SSF53850 2 244 1.51E-34 T 14-10-2018 Atu1663 695c7df012a221ef88b336a3452cf531 329 Pfam PF00795 Carbon-nitrogen hydrolase 67 283 3.5E-14 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu1663 695c7df012a221ef88b336a3452cf531 329 Gene3D G3DSA:3.60.110.10 34 320 4.7E-28 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu1663 695c7df012a221ef88b336a3452cf531 329 SUPERFAMILY SSF56317 38 295 6.67E-33 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu3760 e911cc0a7891111f19de95468df93fd2 262 Pfam PF05013 N-formylglutamate amidohydrolase 18 223 2.8E-38 T 14-10-2018 IPR007709 N-formylglutamate amidohydrolase Atu3760 e911cc0a7891111f19de95468df93fd2 262 PIRSF PIRSF029730 1 259 4.8E-106 T 14-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 Atu3760 e911cc0a7891111f19de95468df93fd2 262 Gene3D G3DSA:3.40.630.40 7 246 4.8E-70 T 14-10-2018 Atu3760 e911cc0a7891111f19de95468df93fd2 262 SUPERFAMILY SSF53187 6 244 3.45E-68 T 14-10-2018 Atu3911 b7fda7a39877a01cfb071f23ea2945f3 269 SUPERFAMILY SSF160920 14 262 3.92E-114 T 14-10-2018 IPR038021 Putative hydro-lyase Atu3911 b7fda7a39877a01cfb071f23ea2945f3 269 PIRSF PIRSF029755 4 269 5.7E-124 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 Atu3911 b7fda7a39877a01cfb071f23ea2945f3 269 Gene3D G3DSA:3.30.2040.10 129 241 1.1E-97 T 14-10-2018 Atu3911 b7fda7a39877a01cfb071f23ea2945f3 269 Pfam PF07286 Protein of unknown function (DUF1445) 119 261 1.3E-66 T 14-10-2018 IPR009906 D-glutamate cyclase Atu3911 b7fda7a39877a01cfb071f23ea2945f3 269 Gene3D G3DSA:3.40.1640.10 24 257 1.1E-97 T 14-10-2018 Atu3911 b7fda7a39877a01cfb071f23ea2945f3 269 Hamap MF_01830 Putative hydro-lyase . 15 269 53.165 T 14-10-2018 IPR016938 Uncharacterised protein family UPF0317 Atu6026 050957b0b45d9351bb9ab09fa72ee03f 236 SUPERFAMILY SSF161098 16 215 4.45E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu6026 050957b0b45d9351bb9ab09fa72ee03f 236 Gene3D G3DSA:1.10.3720.10 11 232 9.6E-40 T 14-10-2018 IPR035906 MetI-like superfamily Atu6026 050957b0b45d9351bb9ab09fa72ee03f 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 5.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6026 050957b0b45d9351bb9ab09fa72ee03f 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 124 1.6E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu0357 5c72b204bef78a65b5696a076836140c 351 SUPERFAMILY SSF52540 133 314 7.71E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0357 5c72b204bef78a65b5696a076836140c 351 Gene3D G3DSA:3.40.50.300 130 337 9.5E-72 T 14-10-2018 Atu0357 5c72b204bef78a65b5696a076836140c 351 Pfam PF02562 PhoH-like protein 134 337 1.9E-90 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Atu6048 db0a1c8def33c0b782c3df771c89db90 836 Gene3D G3DSA:3.40.50.300 32 191 8.3E-17 T 14-10-2018 Atu6048 db0a1c8def33c0b782c3df771c89db90 836 Pfam PF00270 DEAD/DEAH box helicase 39 177 6.7E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Atu6048 db0a1c8def33c0b782c3df771c89db90 836 SMART SM00487 31 213 3.4E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Atu6048 db0a1c8def33c0b782c3df771c89db90 836 SMART SM00491 367 480 8.3E-5 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Atu6048 db0a1c8def33c0b782c3df771c89db90 836 SUPERFAMILY SSF52540 21 172 2.72E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 Pfam PF13602 Zinc-binding dehydrogenase 187 330 7.8E-38 T 14-10-2018 Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 Gene3D G3DSA:3.40.50.720 125 301 7.3E-105 T 14-10-2018 Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 Gene3D G3DSA:3.90.180.10 9 330 7.3E-105 T 14-10-2018 Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 SMART SM00829 13 330 1.6E-35 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 SUPERFAMILY SSF51735 117 297 1.08E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 SUPERFAMILY SSF50129 2 150 3.8E-38 T 14-10-2018 IPR011032 GroES-like superfamily Atu5447 aae6ca4a3f5149cb3976cb3a60ed93fa 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 9.5E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu1783 f1c98e1cab00a4f63134add2ed2e928a 81 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 41 7.8E-11 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Atu1783 f1c98e1cab00a4f63134add2ed2e928a 81 SUPERFAMILY SSF47598 1 43 1.5E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu2521 fa895b9a2660fb0fe9fcbd7fce945384 866 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 35 311 4.3E-10 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Atu2521 fa895b9a2660fb0fe9fcbd7fce945384 866 SUPERFAMILY SSF55729 661 836 6.36E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2521 fa895b9a2660fb0fe9fcbd7fce945384 866 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 553 838 7.9E-98 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal Atu2477 8ca0692d12c97d3756eae2747cb48437 162 SUPERFAMILY SSF47240 4 159 2.02E-50 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu2477 8ca0692d12c97d3756eae2747cb48437 162 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Atu2477 8ca0692d12c97d3756eae2747cb48437 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 136 154 1.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu2477 8ca0692d12c97d3756eae2747cb48437 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 1.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu2477 8ca0692d12c97d3756eae2747cb48437 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 1.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu2477 8ca0692d12c97d3756eae2747cb48437 162 PIRSF PIRSF005900 1 162 2.4E-46 T 14-10-2018 IPR002177 DNA-binding protein Dps Atu2477 8ca0692d12c97d3756eae2747cb48437 162 Pfam PF00210 Ferritin-like domain 21 159 1.6E-29 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Atu2477 8ca0692d12c97d3756eae2747cb48437 162 Gene3D G3DSA:1.20.1260.10 1 162 4.4E-59 T 14-10-2018 IPR012347 Ferritin-like Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 85 193 4.8E-10 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 Gene3D G3DSA:3.90.1310.30 80 210 2.4E-27 T 14-10-2018 Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 Gene3D G3DSA:3.40.710.10 292 474 1.7E-82 T 14-10-2018 Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 SUPERFAMILY SSF56519 83 209 4.45E-31 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 SUPERFAMILY SSF56601 231 564 1.38E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 257 555 2.9E-53 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Atu2100 7fe76d9268cc3039afc8faba40fd3306 580 Gene3D G3DSA:3.30.450.330 232 559 1.7E-82 T 14-10-2018 Atu0674 75b0551213303ebaba5d11220eb5e6d1 89 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 88 2.6E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu0674 75b0551213303ebaba5d11220eb5e6d1 89 SUPERFAMILY SSF143011 3 87 4.32E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu0674 75b0551213303ebaba5d11220eb5e6d1 89 Gene3D G3DSA:3.30.2310.20 1 89 9.2E-33 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu0674 75b0551213303ebaba5d11220eb5e6d1 89 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 88 3.2E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu3610 dfc2a353eaaec098bf63259650478d9f 183 Pfam PF04752 ChaC-like protein 4 171 8.8E-54 T 14-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 Atu3610 dfc2a353eaaec098bf63259650478d9f 183 SUPERFAMILY SSF110857 4 117 6.41E-13 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Atu3610 dfc2a353eaaec098bf63259650478d9f 183 Gene3D G3DSA:3.10.490.10 1 176 8.3E-12 T 14-10-2018 Atu0250 e5004fe9ee67092c687820e06b81aa34 135 SUPERFAMILY SSF46458 7 115 1.87E-21 T 14-10-2018 IPR009050 Globin-like superfamily Atu0250 e5004fe9ee67092c687820e06b81aa34 135 Gene3D G3DSA:1.10.490.10 5 125 4.3E-30 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Atu2270 c681faa665527528c628f3dba7baf185 193 Gene3D G3DSA:3.90.226.10 6 193 6.3E-61 T 14-10-2018 Atu2270 c681faa665527528c628f3dba7baf185 193 SUPERFAMILY SSF52096 21 191 3.13E-54 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu2270 c681faa665527528c628f3dba7baf185 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 109 122 - T 14-10-2018 IPR033135 ClpP, histidine active site Atu2270 c681faa665527528c628f3dba7baf185 193 PRINTS PR00127 Clp protease catalytic subunit P signature 165 184 1.5E-27 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu2270 c681faa665527528c628f3dba7baf185 193 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 1.5E-27 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu2270 c681faa665527528c628f3dba7baf185 193 PRINTS PR00127 Clp protease catalytic subunit P signature 56 76 1.5E-27 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu2270 c681faa665527528c628f3dba7baf185 193 PRINTS PR00127 Clp protease catalytic subunit P signature 87 104 1.5E-27 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu2270 c681faa665527528c628f3dba7baf185 193 PRINTS PR00127 Clp protease catalytic subunit P signature 108 127 1.5E-27 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu2270 c681faa665527528c628f3dba7baf185 193 Pfam PF00574 Clp protease 20 189 5.4E-66 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Atu2270 c681faa665527528c628f3dba7baf185 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 190 32.892 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Atu0849 fb489bc67db397aefd67b5111aec576d 219 SMART SM00953 38 176 9.5E-40 T 14-10-2018 IPR014914 RES domain Atu0849 fb489bc67db397aefd67b5111aec576d 219 Pfam PF08808 RES domain 30 178 1.1E-27 T 14-10-2018 IPR014914 RES domain Atu1615 9e439fe220322a290e215c5b6002f486 642 Gene3D G3DSA:2.40.440.10 372 638 2.7E-25 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu1615 9e439fe220322a290e215c5b6002f486 642 Pfam PF01471 Putative peptidoglycan binding domain 350 382 5.6E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like Atu1615 9e439fe220322a290e215c5b6002f486 642 Pfam PF03734 L,D-transpeptidase catalytic domain 411 572 7.1E-28 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu1615 9e439fe220322a290e215c5b6002f486 642 SUPERFAMILY SSF47090 347 382 1.88E-6 T 14-10-2018 IPR036365 PGBD-like superfamily Atu1615 9e439fe220322a290e215c5b6002f486 642 SUPERFAMILY SSF141523 408 563 2.75E-17 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu4128 765275d56bdc9e5aa955703637f646c1 531 Gene3D G3DSA:3.50.50.60 4 526 3.4E-165 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4128 765275d56bdc9e5aa955703637f646c1 531 SUPERFAMILY SSF51905 3 530 4.21E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4128 765275d56bdc9e5aa955703637f646c1 531 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu4128 765275d56bdc9e5aa955703637f646c1 531 SUPERFAMILY SSF54373 289 472 3.43E-58 T 14-10-2018 Atu4128 765275d56bdc9e5aa955703637f646c1 531 Pfam PF05199 GMC oxidoreductase 386 522 1.2E-34 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Atu4128 765275d56bdc9e5aa955703637f646c1 531 Gene3D G3DSA:3.30.560.10 42 467 3.4E-165 T 14-10-2018 Atu4128 765275d56bdc9e5aa955703637f646c1 531 PIRSF PIRSF000137 1 531 1.3E-140 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu4128 765275d56bdc9e5aa955703637f646c1 531 Pfam PF00732 GMC oxidoreductase 4 294 8.6E-81 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu0100 99ddcf241850bc6ff2a3e1377afb75d8 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 7 247 34.84 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Atu0100 99ddcf241850bc6ff2a3e1377afb75d8 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 10 240 3.3E-65 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Atu0100 99ddcf241850bc6ff2a3e1377afb75d8 251 Gene3D G3DSA:3.90.550.10 8 250 2.7E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0100 99ddcf241850bc6ff2a3e1377afb75d8 251 Pfam PF02348 Cytidylyltransferase 10 221 5.0E-43 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Atu0100 99ddcf241850bc6ff2a3e1377afb75d8 251 SUPERFAMILY SSF53448 9 248 3.52E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu2802 2eab27d39fe89aaea65d7db19ae2a5ca 210 Pfam PF02570 Precorrin-8X methylmutase 13 207 7.7E-72 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Atu2802 2eab27d39fe89aaea65d7db19ae2a5ca 210 Gene3D G3DSA:3.40.50.10230 1 210 3.7E-84 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Atu2802 2eab27d39fe89aaea65d7db19ae2a5ca 210 SUPERFAMILY SSF63965 4 207 1.26E-74 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Atu0934 0d89fb485fdf2803a9fa8737a5c8c2b5 111 PIRSF PIRSF006156 20 111 2.5E-21 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Atu0934 0d89fb485fdf2803a9fa8737a5c8c2b5 111 SUPERFAMILY SSF143011 22 110 1.83E-21 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu0934 0d89fb485fdf2803a9fa8737a5c8c2b5 111 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 22 111 9.6E-30 T 14-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Atu0934 0d89fb485fdf2803a9fa8737a5c8c2b5 111 Gene3D G3DSA:3.30.2310.20 6 111 8.4E-30 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu0934 0d89fb485fdf2803a9fa8737a5c8c2b5 111 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 23 110 7.0E-28 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu1126 4fbc01dd3e63490d77991a232bcf3a5f 155 SUPERFAMILY SSF54690 7 154 8.76E-44 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Atu1126 4fbc01dd3e63490d77991a232bcf3a5f 155 Gene3D G3DSA:3.90.1170.40 4 154 1.1E-42 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Atu1126 4fbc01dd3e63490d77991a232bcf3a5f 155 Pfam PF02391 MoaE protein 12 122 9.8E-29 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Atu0125 2fccd9bb85493ccf96f8b8b4b9184d97 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 48 210 37.228 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atu0125 2fccd9bb85493ccf96f8b8b4b9184d97 216 SUPERFAMILY SSF55068 9 214 4.05E-80 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atu0125 2fccd9bb85493ccf96f8b8b4b9184d97 216 Pfam PF01625 Peptide methionine sulfoxide reductase 51 204 5.6E-65 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atu0125 2fccd9bb85493ccf96f8b8b4b9184d97 216 Gene3D G3DSA:3.30.1060.10 8 216 1.4E-88 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atu0125 2fccd9bb85493ccf96f8b8b4b9184d97 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 49 204 1.0E-62 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Atu5231 9fa2425c9e2f4dfc9b05f7663f2f1e90 300 Pfam PF13673 Acetyltransferase (GNAT) domain 64 142 2.9E-5 T 14-10-2018 IPR000182 GNAT domain Atu5231 9fa2425c9e2f4dfc9b05f7663f2f1e90 300 Gene3D G3DSA:3.40.630.30 17 143 2.5E-10 T 14-10-2018 Atu5231 9fa2425c9e2f4dfc9b05f7663f2f1e90 300 SUPERFAMILY SSF55729 26 257 9.0E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2527 4838f7c363305af932dace4740f2702e 295 SUPERFAMILY SSF49482 14 294 3.66E-96 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Atu2527 4838f7c363305af932dace4740f2702e 295 Pfam PF04444 Catechol dioxygenase N terminus 30 103 6.2E-31 T 14-10-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 Atu2527 4838f7c363305af932dace4740f2702e 295 Gene3D G3DSA:2.60.130.10 5 295 5.7E-114 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Atu2527 4838f7c363305af932dace4740f2702e 295 Pfam PF00775 Dioxygenase 109 294 4.8E-52 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Atu2527 4838f7c363305af932dace4740f2702e 295 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 137 165 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Atu0911 83f436e2fc37940fe8fb753730a47a21 125 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 111 2.2E-29 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Atu2242 261e32bea18317ab79e9cffbff594fa7 616 SUPERFAMILY SSF90123 21 349 2.49E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2242 261e32bea18317ab79e9cffbff594fa7 616 SUPERFAMILY SSF52540 353 601 1.78E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2242 261e32bea18317ab79e9cffbff594fa7 616 Pfam PF00005 ABC transporter 378 531 6.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2242 261e32bea18317ab79e9cffbff594fa7 616 Gene3D G3DSA:3.40.50.300 351 605 1.5E-89 T 14-10-2018 Atu2242 261e32bea18317ab79e9cffbff594fa7 616 Gene3D G3DSA:1.20.1560.10 10 342 1.5E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Atu2242 261e32bea18317ab79e9cffbff594fa7 616 SMART SM00382 386 577 1.4E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2242 261e32bea18317ab79e9cffbff594fa7 616 Pfam PF00664 ABC transporter transmembrane region 40 309 2.3E-15 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Atu2242 261e32bea18317ab79e9cffbff594fa7 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu3110 49a5da158a52c92b2ece19396ff810a9 262 Gene3D G3DSA:3.20.20.150 6 255 4.6E-35 T 14-10-2018 Atu3110 49a5da158a52c92b2ece19396ff810a9 262 SUPERFAMILY SSF51658 5 228 4.32E-30 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3110 49a5da158a52c92b2ece19396ff810a9 262 Pfam PF01261 Xylose isomerase-like TIM barrel 23 194 6.0E-15 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu5072 76158e620a08d9ab9207bfe8f5aca5ef 396 Gene3D G3DSA:2.120.10.10 28 273 4.1E-22 T 14-10-2018 Atu5072 76158e620a08d9ab9207bfe8f5aca5ef 396 Pfam PF13088 BNR repeat-like domain 44 371 3.1E-70 T 14-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 Atu5072 76158e620a08d9ab9207bfe8f5aca5ef 396 SUPERFAMILY SSF50939 33 392 2.8E-41 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 Atu6121 19c10eddf388784cc5e70c3c58b3b295 85 Pfam PF05406 WGR domain 9 84 3.0E-21 T 14-10-2018 IPR008893 WGR domain Atu6121 19c10eddf388784cc5e70c3c58b3b295 85 SUPERFAMILY SSF142921 2 81 3.4E-20 T 14-10-2018 IPR036930 WGR domain superfamily Atu6121 19c10eddf388784cc5e70c3c58b3b295 85 SMART SM00773 7 85 5.5E-24 T 14-10-2018 IPR008893 WGR domain Atu6121 19c10eddf388784cc5e70c3c58b3b295 85 Gene3D G3DSA:2.20.140.10 14 85 8.2E-8 T 14-10-2018 IPR036930 WGR domain superfamily Atu0605 1236f345641ad85998832277d393c10c 290 SUPERFAMILY SSF53850 92 277 3.44E-11 T 14-10-2018 Atu0605 1236f345641ad85998832277d393c10c 290 Gene3D G3DSA:3.40.190.290 93 274 2.5E-6 T 14-10-2018 Atu0605 1236f345641ad85998832277d393c10c 290 Pfam PF03466 LysR substrate binding domain 93 272 1.1E-6 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0605 1236f345641ad85998832277d393c10c 290 SUPERFAMILY SSF46785 5 101 5.44E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0605 1236f345641ad85998832277d393c10c 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.3E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0605 1236f345641ad85998832277d393c10c 290 Gene3D G3DSA:1.10.10.10 4 89 1.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5144 acc5b179386cf5ecae9b53b65d48a911 251 SUPERFAMILY SSF53474 2 242 4.02E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5144 acc5b179386cf5ecae9b53b65d48a911 251 Pfam PF00326 Prolyl oligopeptidase family 91 228 3.7E-17 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Atu5144 acc5b179386cf5ecae9b53b65d48a911 251 Gene3D G3DSA:3.40.50.1820 1 245 1.7E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1093 3d22ace0178f476f932f5ca32e4c4c40 347 SUPERFAMILY SSF51430 1 346 9.69E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu1093 3d22ace0178f476f932f5ca32e4c4c40 347 Pfam PF00248 Aldo/keto reductase family 15 338 1.0E-68 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu1093 3d22ace0178f476f932f5ca32e4c4c40 347 Gene3D G3DSA:3.20.20.100 1 347 1.2E-120 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 SUPERFAMILY SSF46785 5 113 9.08E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 Gene3D G3DSA:1.10.10.10 1 86 1.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 Pfam PF03466 LysR substrate binding domain 90 279 2.9E-35 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 SUPERFAMILY SSF53850 91 285 5.82E-35 T 14-10-2018 Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 Gene3D G3DSA:3.40.190.10 97 263 1.3E-55 T 14-10-2018 Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.6E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0654 95644b6b91eaecd2b08dbe4a25402145 316 Gene3D G3DSA:3.40.190.10 163 256 1.3E-55 T 14-10-2018 Atu4604 da6bcb464856d98378ee922d0523fdb4 309 Pfam PF13276 HTH-like domain 47 99 1.1E-7 T 14-10-2018 IPR025948 HTH-like domain Atu4604 da6bcb464856d98378ee922d0523fdb4 309 SUPERFAMILY SSF53098 113 272 1.52E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu4604 da6bcb464856d98378ee922d0523fdb4 309 Gene3D G3DSA:3.30.420.10 113 254 1.3E-17 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu4604 da6bcb464856d98378ee922d0523fdb4 309 Pfam PF13683 Integrase core domain 199 265 1.1E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu2589 b391a3d67bae691c8c2a3fa969322ff3 391 Gene3D G3DSA:1.10.3720.10 173 387 1.6E-15 T 14-10-2018 IPR035906 MetI-like superfamily Atu2589 b391a3d67bae691c8c2a3fa969322ff3 391 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 40 92 2.2E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu2589 b391a3d67bae691c8c2a3fa969322ff3 391 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 202 389 2.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2589 b391a3d67bae691c8c2a3fa969322ff3 391 SUPERFAMILY SSF161098 179 372 9.59E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu5229 3269839395751a71ff4d0e0ab7df2c66 323 SUPERFAMILY SSF50475 7 163 1.18E-49 T 14-10-2018 Atu5229 3269839395751a71ff4d0e0ab7df2c66 323 SMART SM00903 17 160 4.2E-57 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu5229 3269839395751a71ff4d0e0ab7df2c66 323 Gene3D G3DSA:3.90.79.10 172 296 6.9E-27 T 14-10-2018 Atu5229 3269839395751a71ff4d0e0ab7df2c66 323 Pfam PF01613 Flavin reductase like domain 18 162 1.2E-35 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu5229 3269839395751a71ff4d0e0ab7df2c66 323 Gene3D G3DSA:2.30.110.10 6 171 4.0E-50 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu2800 d61d4d79144caf456cf9ca8c1e749788 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 213 7.3E-36 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Atu2800 d61d4d79144caf456cf9ca8c1e749788 253 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 5 247 2.0E-83 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Atu2800 d61d4d79144caf456cf9ca8c1e749788 253 Gene3D G3DSA:3.40.1010.10 1 115 2.4E-25 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Atu2800 d61d4d79144caf456cf9ca8c1e749788 253 SUPERFAMILY SSF53790 1 235 5.37E-51 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Atu2800 d61d4d79144caf456cf9ca8c1e749788 253 Gene3D G3DSA:3.30.950.10 116 249 2.2E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Atu0306 72406851e509a3f4d70668eb1594a24f 293 SUPERFAMILY SSF161098 54 281 3.01E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu0306 72406851e509a3f4d70668eb1594a24f 293 Gene3D G3DSA:1.10.3720.10 50 291 1.3E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu0306 72406851e509a3f4d70668eb1594a24f 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 291 5.0E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2515 51db061e99b481b6ba834dc85628b81d 276 Gene3D G3DSA:3.40.50.300 1 276 1.4E-73 T 14-10-2018 Atu2515 51db061e99b481b6ba834dc85628b81d 276 SUPERFAMILY SSF52540 2 242 2.95E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2515 51db061e99b481b6ba834dc85628b81d 276 SMART SM00382 30 237 9.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2515 51db061e99b481b6ba834dc85628b81d 276 Pfam PF00005 ABC transporter 31 180 7.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu6005 658b73508aeadab75da6adf8e06eac6a 314 Pfam PF02027 RolB/RolC glucosidase family 5 208 3.2E-58 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu4115 d0bd8ce6554794eb476ff8f62a8e0539 304 SUPERFAMILY SSF161098 96 283 1.11E-30 T 14-10-2018 IPR035906 MetI-like superfamily Atu4115 d0bd8ce6554794eb476ff8f62a8e0539 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 72 6.8E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu4115 d0bd8ce6554794eb476ff8f62a8e0539 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 1.0E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4115 d0bd8ce6554794eb476ff8f62a8e0539 304 Gene3D G3DSA:1.10.3720.10 91 298 6.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu0949 fe0bd160596619830372af0a70ca1887 279 SUPERFAMILY SSF51735 4 271 2.1E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0949 fe0bd160596619830372af0a70ca1887 279 Pfam PF05368 NmrA-like family 5 212 1.6E-13 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Atu0949 fe0bd160596619830372af0a70ca1887 279 Gene3D G3DSA:3.90.25.10 129 261 1.1E-62 T 14-10-2018 Atu0949 fe0bd160596619830372af0a70ca1887 279 Gene3D G3DSA:3.40.50.720 6 259 1.1E-62 T 14-10-2018 Atu5332 fe991308d7fb15c97fef8c6762b5a38f 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 3.6E-151 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 Gene3D G3DSA:3.40.50.1820 18 299 1.0E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 1.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 1.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 94 1.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 244 258 1.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 Pfam PF12146 Serine aminopeptidase, S33 81 281 6.1E-16 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu5446 82ca8740ca98b8c93953058ec0cf4d5c 300 SUPERFAMILY SSF53474 31 299 3.75E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5155 1ec2744ac3ac613c5fea015df2ddecfa 144 Gene3D G3DSA:1.10.10.10 2 141 3.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5155 1ec2744ac3ac613c5fea015df2ddecfa 144 Pfam PF01047 MarR family 37 94 4.0E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5155 1ec2744ac3ac613c5fea015df2ddecfa 144 SMART SM00347 29 129 1.3E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu5155 1ec2744ac3ac613c5fea015df2ddecfa 144 SUPERFAMILY SSF46785 9 141 9.41E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3478 fd9217800c421c2893ac889d649e3781 533 Gene3D G3DSA:3.90.226.10 271 533 8.5E-106 T 14-10-2018 Atu3478 fd9217800c421c2893ac889d649e3781 533 SUPERFAMILY SSF52096 273 533 1.58E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3478 fd9217800c421c2893ac889d649e3781 533 SUPERFAMILY SSF52096 23 267 3.94E-72 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3478 fd9217800c421c2893ac889d649e3781 533 Gene3D G3DSA:3.90.226.10 4 270 1.2E-97 T 14-10-2018 Atu3478 fd9217800c421c2893ac889d649e3781 533 Pfam PF01039 Carboxyl transferase domain 46 523 7.7E-152 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Atu0242 df6aa8b11712f7a6af382ec025a25351 289 SUPERFAMILY SSF56317 2 278 2.35E-48 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu0242 df6aa8b11712f7a6af382ec025a25351 289 Pfam PF00795 Carbon-nitrogen hydrolase 3 272 9.1E-21 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu0242 df6aa8b11712f7a6af382ec025a25351 289 Gene3D G3DSA:3.60.110.10 1 286 1.1E-45 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu2806 5aaa95009e9b520ae860c9abcce31ad2 152 Pfam PF07845 Protein of unknown function (DUF1636) 35 144 6.5E-28 T 14-10-2018 IPR012863 Protein of unknown function DUF1636 Atu3860 872ed86d184d8a8f45615c5a1c4bdf41 747 SUPERFAMILY SSF56059 115 313 1.02E-23 T 14-10-2018 Atu3860 872ed86d184d8a8f45615c5a1c4bdf41 747 SUPERFAMILY SSF88713 459 710 1.69E-28 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu3860 872ed86d184d8a8f45615c5a1c4bdf41 747 Pfam PF01522 Polysaccharide deacetylase 499 693 9.4E-23 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atu3860 872ed86d184d8a8f45615c5a1c4bdf41 747 Gene3D G3DSA:3.30.470.20 109 336 3.3E-17 T 14-10-2018 Atu2523 55cc3d508cc177f5d665f6002b4b0c67 442 Pfam PF16684 Telomere resolvase 144 410 7.4E-91 T 14-10-2018 IPR032047 Telomere resolvase ResT Atu2523 55cc3d508cc177f5d665f6002b4b0c67 442 Gene3D G3DSA:1.10.443.30 195 420 8.3E-102 T 14-10-2018 IPR038280 ResT superfamily Atu2719 d979cb970d72c6059730cf0d5110d3c3 339 PIRSF PIRSF005096 1 338 1.5E-100 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Atu2719 d979cb970d72c6059730cf0d5110d3c3 339 Pfam PF01263 Aldose 1-epimerase 21 334 1.1E-83 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Atu2719 d979cb970d72c6059730cf0d5110d3c3 339 SUPERFAMILY SSF74650 9 336 1.76E-103 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu2719 d979cb970d72c6059730cf0d5110d3c3 339 Gene3D G3DSA:2.70.98.10 4 337 6.4E-110 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atu4566 f21961e542ed154853fe7cfcace529d9 660 Gene3D G3DSA:1.20.144.10 178 376 9.1E-39 T 14-10-2018 Atu4566 f21961e542ed154853fe7cfcace529d9 660 SUPERFAMILY SSF51126 469 642 7.85E-11 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Atu4566 f21961e542ed154853fe7cfcace529d9 660 SUPERFAMILY SSF48317 225 369 1.57E-24 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Atu4566 f21961e542ed154853fe7cfcace529d9 660 SMART SM00014 213 356 5.5E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Atu4566 f21961e542ed154853fe7cfcace529d9 660 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 519 548 1.4E-11 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat Atu4566 f21961e542ed154853fe7cfcace529d9 660 Pfam PF12951 Passenger-associated-transport-repeat 519 547 7.5E-10 T 14-10-2018 IPR013425 Autotransporter-associated beta strand repeat Atu4566 f21961e542ed154853fe7cfcace529d9 660 PRINTS PR00483 Bacterial acid phosphatase class A signature 287 313 4.5E-5 T 14-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 Atu4566 f21961e542ed154853fe7cfcace529d9 660 PRINTS PR00483 Bacterial acid phosphatase class A signature 319 343 4.5E-5 T 14-10-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 Atu4566 f21961e542ed154853fe7cfcace529d9 660 Pfam PF01569 PAP2 superfamily 229 358 1.4E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Atu1488 c1deb3fdda98c19b8df5c639c6745cf5 333 Pfam PF13936 Helix-turn-helix domain 4 47 2.0E-14 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain Atu1488 c1deb3fdda98c19b8df5c639c6745cf5 333 SUPERFAMILY SSF53098 178 326 9.56E-23 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu1488 c1deb3fdda98c19b8df5c639c6745cf5 333 Pfam PF00665 Integrase core domain 179 285 8.0E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu8186 b1dafa71f5fd3774d0c68fb59d08f63a 748 Gene3D G3DSA:1.25.40.10 580 736 6.4E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu8186 b1dafa71f5fd3774d0c68fb59d08f63a 748 Gene3D G3DSA:1.25.40.10 327 502 3.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu8186 b1dafa71f5fd3774d0c68fb59d08f63a 748 SUPERFAMILY SSF48452 329 641 3.92E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu8186 b1dafa71f5fd3774d0c68fb59d08f63a 748 SUPERFAMILY SSF48452 589 724 8.04E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0498 a148f8c12e4aaf6e7521d8c485791a5e 308 Pfam PF01925 Sulfite exporter TauE/SafE 18 287 2.7E-48 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu1163 c78f93edfe183bb43eabe3c63a7b267d 170 SMART SM00347 47 160 1.9E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1163 c78f93edfe183bb43eabe3c63a7b267d 170 Gene3D G3DSA:1.10.10.10 3 161 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1163 c78f93edfe183bb43eabe3c63a7b267d 170 Pfam PF13463 Winged helix DNA-binding domain 54 119 1.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1163 c78f93edfe183bb43eabe3c63a7b267d 170 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Atu1163 c78f93edfe183bb43eabe3c63a7b267d 170 SUPERFAMILY SSF46785 20 163 3.91E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0139 204ceba27db15586187325a233b97ae1 130 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 30 103 2.8E-17 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 Atu0139 204ceba27db15586187325a233b97ae1 130 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 23 119 3.8E-33 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 Atu1871 eec3ee2b6dfd8c588a27c25a5c94798f 208 SUPERFAMILY SSF47616 84 196 8.21E-20 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Atu1871 eec3ee2b6dfd8c588a27c25a5c94798f 208 Gene3D G3DSA:3.40.30.10 6 192 2.2E-41 T 14-10-2018 Atu1871 eec3ee2b6dfd8c588a27c25a5c94798f 208 SUPERFAMILY SSF52833 2 84 6.73E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1871 eec3ee2b6dfd8c588a27c25a5c94798f 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 15 79 1.9E-11 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Atu1871 eec3ee2b6dfd8c588a27c25a5c94798f 208 Gene3D G3DSA:1.20.1050.10 82 187 2.2E-41 T 14-10-2018 Atu4467 c02c0c10ae969cb1672f517e2a32c3da 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 3.1E-14 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Atu4467 c02c0c10ae969cb1672f517e2a32c3da 57 PIRSF PIRSF036466 1 55 2.4E-22 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Atu4467 c02c0c10ae969cb1672f517e2a32c3da 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 56 19.556 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Atu3077 0b7c5708fd1275b40bfb41abd0e0be54 385 Gene3D G3DSA:3.40.710.10 20 384 4.3E-123 T 14-10-2018 Atu3077 0b7c5708fd1275b40bfb41abd0e0be54 385 SUPERFAMILY SSF56601 29 381 1.69E-87 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Atu3077 0b7c5708fd1275b40bfb41abd0e0be54 385 Pfam PF00144 Beta-lactamase 35 380 2.3E-70 T 14-10-2018 IPR001466 Beta-lactamase-related Atu3077 0b7c5708fd1275b40bfb41abd0e0be54 385 ProSitePatterns PS00336 Beta-lactamase class-C active site. 82 89 - T 14-10-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 Atu4803 54d013900af7cb88143161acdb7e6525 242 SMART SM00421 179 236 6.5E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4803 54d013900af7cb88143161acdb7e6525 242 SUPERFAMILY SSF46894 169 236 2.45E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Atu4803 54d013900af7cb88143161acdb7e6525 242 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 233 1.6E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4803 54d013900af7cb88143161acdb7e6525 242 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4803 54d013900af7cb88143161acdb7e6525 242 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4803 54d013900af7cb88143161acdb7e6525 242 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 1.9E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu4803 54d013900af7cb88143161acdb7e6525 242 SUPERFAMILY SSF52172 32 154 8.11E-10 T 14-10-2018 IPR011006 CheY-like superfamily Atu4803 54d013900af7cb88143161acdb7e6525 242 Gene3D G3DSA:3.40.50.12740 32 238 4.7E-28 T 14-10-2018 Atu4803 54d013900af7cb88143161acdb7e6525 242 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 SUPERFAMILY SSF53335 57 416 2.89E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 Gene3D G3DSA:3.40.1350.30 120 252 2.2E-75 T 14-10-2018 Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 348 378 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 SUPERFAMILY SSF50249 3 46 3.03E-8 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 249 416 5.9E-16 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 Gene3D G3DSA:3.40.50.150 76 411 2.2E-75 T 14-10-2018 Atu0735 d4f6efcf178ec330a34cb3d7f5223bcb 416 Gene3D G3DSA:2.40.50.140 1 68 2.2E-12 T 14-10-2018 Atu3432 b76816410576a942072ae1daeb1c534d 343 Pfam PF09084 NMT1/THI5 like 18 122 4.7E-5 T 14-10-2018 IPR015168 SsuA/THI5-like Atu3432 b76816410576a942072ae1daeb1c534d 343 SUPERFAMILY SSF53850 32 329 2.17E-21 T 14-10-2018 Atu3432 b76816410576a942072ae1daeb1c534d 343 Gene3D G3DSA:3.40.190.10 8 333 2.3E-108 T 14-10-2018 Atu3432 b76816410576a942072ae1daeb1c534d 343 Gene3D G3DSA:3.40.190.270 90 236 2.3E-108 T 14-10-2018 Atu1532 f7bcc4b425ef01de7b8c2ca151a70f0a 118 SUPERFAMILY SSF54593 3 116 2.82E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1532 f7bcc4b425ef01de7b8c2ca151a70f0a 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 113 4.7E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1532 f7bcc4b425ef01de7b8c2ca151a70f0a 118 Gene3D G3DSA:3.10.180.10 1 118 2.5E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3277 3f08af1c8598a768ee6700a3ce3ddf45 174 SMART SM00903 29 170 4.5E-55 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu3277 3f08af1c8598a768ee6700a3ce3ddf45 174 Pfam PF01613 Flavin reductase like domain 30 168 8.3E-34 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Atu3277 3f08af1c8598a768ee6700a3ce3ddf45 174 Gene3D G3DSA:2.30.110.10 5 174 1.1E-51 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu3277 3f08af1c8598a768ee6700a3ce3ddf45 174 SUPERFAMILY SSF50475 22 171 8.83E-46 T 14-10-2018 Atu1791 7b2e9e422eba67dc901c08fc76ce07f0 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 338 3.7E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu4657 945d9eb585c2a25128856ff07da2432e 303 SUPERFAMILY SSF103481 56 156 2.88E-14 T 14-10-2018 Atu4657 945d9eb585c2a25128856ff07da2432e 303 Pfam PF00892 EamA-like transporter family 27 152 5.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4657 945d9eb585c2a25128856ff07da2432e 303 Pfam PF00892 EamA-like transporter family 162 286 3.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4657 945d9eb585c2a25128856ff07da2432e 303 SUPERFAMILY SSF103481 200 286 2.88E-12 T 14-10-2018 Atu1319 917228bda526403549d0588e1d5d1c01 493 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 485 94.574 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu1319 917228bda526403549d0588e1d5d1c01 493 Gene3D G3DSA:3.90.1300.10 4 491 3.0E-186 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu1319 917228bda526403549d0588e1d5d1c01 493 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 483 1.4E-171 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu1319 917228bda526403549d0588e1d5d1c01 493 ProSitePatterns PS00571 Amidases signature. 157 188 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Atu1319 917228bda526403549d0588e1d5d1c01 493 SUPERFAMILY SSF75304 3 491 9.68E-157 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu1319 917228bda526403549d0588e1d5d1c01 493 Pfam PF01425 Amidase 25 473 4.9E-149 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Atu2172 b1e17a4acbaa92627a59226c36224f32 465 Pfam PF01554 MatE 256 422 9.1E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu2172 b1e17a4acbaa92627a59226c36224f32 465 Pfam PF01554 MatE 30 189 1.3E-27 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu2172 b1e17a4acbaa92627a59226c36224f32 465 PIRSF PIRSF006603 21 465 1.1E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu2172 b1e17a4acbaa92627a59226c36224f32 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 435 1.8E-75 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Atu4868 db9ae64261b38dad8b1bc772112b91d2 356 Gene3D G3DSA:3.20.20.100 9 341 6.8E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu4868 db9ae64261b38dad8b1bc772112b91d2 356 Pfam PF00248 Aldo/keto reductase family 22 324 3.1E-71 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4868 db9ae64261b38dad8b1bc772112b91d2 356 SUPERFAMILY SSF51430 9 324 3.01E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3379 87243372b2e872731a309bc9effcf74a 314 SUPERFAMILY SSF161098 91 295 3.49E-16 T 14-10-2018 IPR035906 MetI-like superfamily Atu3379 87243372b2e872731a309bc9effcf74a 314 Gene3D G3DSA:1.10.3720.10 84 305 1.3E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu3379 87243372b2e872731a309bc9effcf74a 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 311 3.2E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2314 963ca233a8bb93652829bf55a10dff86 420 Pfam PF06181 Urate oxidase N-terminal 6 298 7.8E-135 T 14-10-2018 IPR010389 Urate oxidase N-terminal Atu2314 963ca233a8bb93652829bf55a10dff86 420 SUPERFAMILY SSF46626 288 408 2.75E-7 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu3955 8e9a5e462aa6adc308edb0beb01c88ff 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 266 1.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3955 8e9a5e462aa6adc308edb0beb01c88ff 282 Gene3D G3DSA:1.10.3720.10 82 276 2.5E-33 T 14-10-2018 IPR035906 MetI-like superfamily Atu3955 8e9a5e462aa6adc308edb0beb01c88ff 282 SUPERFAMILY SSF161098 87 270 9.94E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu1518 3e1a274326b7f8ad622e25a3bc3225b2 137 Gene3D G3DSA:1.10.10.10 1 73 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1518 3e1a274326b7f8ad622e25a3bc3225b2 137 Gene3D G3DSA:3.30.1490.190 80 137 3.4E-15 T 14-10-2018 Atu1518 3e1a274326b7f8ad622e25a3bc3225b2 137 SUPERFAMILY SSF46785 5 133 5.83E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1518 3e1a274326b7f8ad622e25a3bc3225b2 137 Pfam PF01475 Ferric uptake regulator family 9 128 2.8E-11 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Atu3785 5f5099045b4412abd248f7159d582813 350 PIRSF PIRSF038940 1 350 4.4E-164 T 14-10-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 Atu3785 5f5099045b4412abd248f7159d582813 350 Gene3D G3DSA:3.40.640.10 12 251 1.3E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3785 5f5099045b4412abd248f7159d582813 350 Gene3D G3DSA:3.90.1150.10 5 343 1.3E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3785 5f5099045b4412abd248f7159d582813 350 SUPERFAMILY SSF53383 3 347 4.03E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3785 5f5099045b4412abd248f7159d582813 350 Pfam PF01212 Beta-eliminating lyase 3 290 2.0E-55 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Atu3923 63bb39589594bc19468ca44436416df1 337 SMART SM00470 78 169 1.4E-25 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu3923 63bb39589594bc19468ca44436416df1 337 SUPERFAMILY SSF110849 78 171 4.88E-20 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Atu3923 63bb39589594bc19468ca44436416df1 337 Pfam PF07506 RepB plasmid partitioning protein 171 332 5.5E-18 T 14-10-2018 IPR011111 RepB plasmid partition Atu3923 63bb39589594bc19468ca44436416df1 337 Gene3D G3DSA:3.90.1530.30 92 155 3.0E-11 T 14-10-2018 Atu3923 63bb39589594bc19468ca44436416df1 337 TIGRFAM TIGR03454 partition_RepB: plasmid partitioning protein RepB 2 334 1.5E-122 T 14-10-2018 IPR017819 Plasmid partitioning protein, RepB Atu3923 63bb39589594bc19468ca44436416df1 337 Pfam PF02195 ParB-like nuclease domain 81 168 2.0E-17 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Atu3923 63bb39589594bc19468ca44436416df1 337 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 83 248 1.2E-40 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Atu3093 715563a2dee8c702d678cecef949ed08 297 SUPERFAMILY SSF53955 39 165 3.04E-28 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu3093 715563a2dee8c702d678cecef949ed08 297 Gene3D G3DSA:1.10.530.10 43 174 1.8E-24 T 14-10-2018 Atu3093 715563a2dee8c702d678cecef949ed08 297 Pfam PF01464 Transglycosylase SLT domain 55 145 8.4E-16 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu2426 736486ba37da4154ec8f8be19bd91152 465 Pfam PF11862 Domain of unknown function (DUF3382) 19 118 1.4E-15 T 14-10-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal Atu2426 736486ba37da4154ec8f8be19bd91152 465 Pfam PF02653 Branched-chain amino acid transport system / permease component 136 432 1.7E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0128 cbbc2e2a5dd50058f4660c84641a26a3 367 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 346 3.5E-29 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu2251 0482092ee610eb04847977c1b8c827e1 210 Pfam PF00293 NUDIX domain 51 159 6.5E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu2251 0482092ee610eb04847977c1b8c827e1 210 SUPERFAMILY SSF55811 33 205 5.28E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu2251 0482092ee610eb04847977c1b8c827e1 210 Gene3D G3DSA:3.90.79.10 43 208 5.9E-47 T 14-10-2018 Atu1124 3814bffe3aab2dcb0a97ebaf27289a08 183 SUPERFAMILY SSF160904 4 177 8.63E-34 T 14-10-2018 Atu1124 3814bffe3aab2dcb0a97ebaf27289a08 183 Gene3D G3DSA:1.10.3300.10 4 179 3.2E-15 T 14-10-2018 IPR023286 ABATE domain superfamily Atu1124 3814bffe3aab2dcb0a97ebaf27289a08 183 Pfam PF11706 CGNR zinc finger 137 178 1.6E-16 T 14-10-2018 IPR021005 Zinc finger, CGNR Atu4292 370a9301933a7fa58df496d5fb2a9bd9 393 Pfam PF07690 Major Facilitator Superfamily 10 325 7.8E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu4292 370a9301933a7fa58df496d5fb2a9bd9 393 Gene3D G3DSA:1.20.1250.20 2 189 1.3E-34 T 14-10-2018 Atu4292 370a9301933a7fa58df496d5fb2a9bd9 393 SUPERFAMILY SSF103473 3 380 1.96E-62 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4292 370a9301933a7fa58df496d5fb2a9bd9 393 Gene3D G3DSA:1.20.1250.20 194 381 2.8E-16 T 14-10-2018 Atu2534 17b17925f3663ffbdb1b747c69c018cf 209 Pfam PF13505 Outer membrane protein beta-barrel domain 25 209 6.6E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel Atu2534 17b17925f3663ffbdb1b747c69c018cf 209 SUPERFAMILY SSF56925 42 209 3.14E-25 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu2534 17b17925f3663ffbdb1b747c69c018cf 209 Gene3D G3DSA:2.40.160.20 44 209 1.2E-16 T 14-10-2018 Atu4796 1a62d27ff27abbbe93091a885d938302 214 SUPERFAMILY SSF102588 9 210 6.8E-31 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Atu4796 1a62d27ff27abbbe93091a885d938302 214 Pfam PF02585 GlcNAc-PI de-N-acetylase 13 127 1.8E-12 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Atu4796 1a62d27ff27abbbe93091a885d938302 214 Gene3D G3DSA:3.40.50.10320 8 213 1.1E-25 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Atu0231 5be4f0304b2921cc2e5d77bb7603212d 224 SUPERFAMILY SSF52317 9 195 1.32E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu0231 5be4f0304b2921cc2e5d77bb7603212d 224 Pfam PF00117 Glutamine amidotransferase class-I 13 174 7.6E-11 T 14-10-2018 IPR017926 Glutamine amidotransferase Atu0231 5be4f0304b2921cc2e5d77bb7603212d 224 Gene3D G3DSA:3.40.50.880 2 197 1.5E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu2410 dac489c4352dccdc75f299a108640849 231 Gene3D G3DSA:3.40.50.300 1 230 8.8E-58 T 14-10-2018 Atu2410 dac489c4352dccdc75f299a108640849 231 SMART SM00382 26 218 6.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2410 dac489c4352dccdc75f299a108640849 231 Pfam PF00005 ABC transporter 17 160 1.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2410 dac489c4352dccdc75f299a108640849 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 8.3E-102 T 14-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE Atu2410 dac489c4352dccdc75f299a108640849 231 SUPERFAMILY SSF52540 2 220 8.39E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2522 83ad43fff0939f9fd14389f434ea2b22 456 PIRSF PIRSF029063 1 456 5.1E-191 T 14-10-2018 IPR011225 Type IV secretory pathway, VirJ component Atu2522 83ad43fff0939f9fd14389f434ea2b22 456 SUPERFAMILY SSF53474 250 448 1.53E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2522 83ad43fff0939f9fd14389f434ea2b22 456 Gene3D G3DSA:3.40.50.1820 264 452 2.4E-7 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2522 83ad43fff0939f9fd14389f434ea2b22 456 Pfam PF06057 Bacterial virulence protein (VirJ) 261 453 6.6E-87 T 14-10-2018 IPR010333 Bacterial virulence Atu4706 798d2580f4298777b10b9a52cc4d4c90 159 Gene3D G3DSA:3.40.30.10 75 156 2.2E-19 T 14-10-2018 Atu4706 798d2580f4298777b10b9a52cc4d4c90 159 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 115 133 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4706 798d2580f4298777b10b9a52cc4d4c90 159 SUPERFAMILY SSF52833 10 156 6.71E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu4706 798d2580f4298777b10b9a52cc4d4c90 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 156 6.5E-41 T 14-10-2018 Atu4706 798d2580f4298777b10b9a52cc4d4c90 159 Gene3D G3DSA:1.10.10.1590 6 74 3.6E-13 T 14-10-2018 Atu4706 798d2580f4298777b10b9a52cc4d4c90 159 PIRSF PIRSF000216 2 159 1.3E-44 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu3652 36566e0223c77038b7a0b71e6b2a0fac 280 SUPERFAMILY SSF53474 12 247 3.03E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3652 36566e0223c77038b7a0b71e6b2a0fac 280 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 72 278 5.4E-20 T 14-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal Atu3652 36566e0223c77038b7a0b71e6b2a0fac 280 Gene3D G3DSA:3.40.50.1820 6 280 9.2E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0422 10e6f2f73949fbf549d166e6cdf9fcc8 440 Gene3D G3DSA:1.10.3720.10 217 440 2.2E-34 T 14-10-2018 IPR035906 MetI-like superfamily Atu0422 10e6f2f73949fbf549d166e6cdf9fcc8 440 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 198 437 2.8E-68 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Atu0422 10e6f2f73949fbf549d166e6cdf9fcc8 440 Pfam PF11812 Domain of unknown function (DUF3333) 23 172 1.2E-54 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 Atu0422 10e6f2f73949fbf549d166e6cdf9fcc8 440 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 240 439 1.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0422 10e6f2f73949fbf549d166e6cdf9fcc8 440 SUPERFAMILY SSF161098 215 426 3.79E-36 T 14-10-2018 IPR035906 MetI-like superfamily Atu3964 0abfb2b37644c651cd02d5059818c997 337 Gene3D G3DSA:3.40.50.720 2 308 2.7E-76 T 14-10-2018 Atu3964 0abfb2b37644c651cd02d5059818c997 337 Gene3D G3DSA:3.30.360.10 122 330 2.7E-76 T 14-10-2018 Atu3964 0abfb2b37644c651cd02d5059818c997 337 SUPERFAMILY SSF55347 125 311 9.48E-28 T 14-10-2018 Atu3964 0abfb2b37644c651cd02d5059818c997 337 SUPERFAMILY SSF51735 3 150 4.93E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3964 0abfb2b37644c651cd02d5059818c997 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 129 231 8.4E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Atu3964 0abfb2b37644c651cd02d5059818c997 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 115 2.5E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu3283 8693a2c104d0c591d330a082048f6b11 308 SUPERFAMILY SSF161098 72 298 1.83E-63 T 14-10-2018 IPR035906 MetI-like superfamily Atu3283 8693a2c104d0c591d330a082048f6b11 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 301 4.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3283 8693a2c104d0c591d330a082048f6b11 308 Gene3D G3DSA:1.10.3720.10 68 307 5.3E-72 T 14-10-2018 IPR035906 MetI-like superfamily Atu1398 73b5fbd0a8f1955aa48cf8916a8e157e 234 SUPERFAMILY SSF161098 15 207 9.35E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu1398 73b5fbd0a8f1955aa48cf8916a8e157e 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 5.5E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu1398 73b5fbd0a8f1955aa48cf8916a8e157e 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 3.3E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1398 73b5fbd0a8f1955aa48cf8916a8e157e 234 Gene3D G3DSA:1.10.3720.10 3 219 4.0E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu1257 909057aabaf259aae3107756b2cd0608 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 373 1.2E-38 T 14-10-2018 IPR000160 GGDEF domain Atu1257 909057aabaf259aae3107756b2cd0608 415 SMART SM00267 205 377 8.7E-53 T 14-10-2018 IPR000160 GGDEF domain Atu1257 909057aabaf259aae3107756b2cd0608 415 Gene3D G3DSA:3.30.70.270 210 383 7.9E-49 T 14-10-2018 Atu1257 909057aabaf259aae3107756b2cd0608 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 376 3.6E-42 T 14-10-2018 IPR000160 GGDEF domain Atu1257 909057aabaf259aae3107756b2cd0608 415 SUPERFAMILY SSF55073 221 376 1.26E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Atu4260 2a20cd9144cce39d4598828edbd47336 258 Gene3D G3DSA:1.10.3720.10 51 246 5.4E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu4260 2a20cd9144cce39d4598828edbd47336 258 SUPERFAMILY SSF161098 53 238 4.84E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu4260 2a20cd9144cce39d4598828edbd47336 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 245 3.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4169 9b609b58641d24859130d9b181cf79ce 365 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 2 362 2.6E-124 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 Atu4169 9b609b58641d24859130d9b181cf79ce 365 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 238 321 5.9E-9 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Atu4169 9b609b58641d24859130d9b181cf79ce 365 PIRSF PIRSF038941 1 365 7.9E-141 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 Atu4169 9b609b58641d24859130d9b181cf79ce 365 Gene3D G3DSA:2.40.37.10 3 365 3.1E-157 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu4169 9b609b58641d24859130d9b181cf79ce 365 SUPERFAMILY SSF50621 207 354 6.49E-30 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Atu4169 9b609b58641d24859130d9b181cf79ce 365 SUPERFAMILY SSF51419 10 235 6.92E-41 T 14-10-2018 IPR029066 PLP-binding barrel Atu4169 9b609b58641d24859130d9b181cf79ce 365 Gene3D G3DSA:3.20.20.10 11 237 3.1E-157 T 14-10-2018 IPR029066 PLP-binding barrel Atu1008 3dff9be9ccb0e08263da6b82e563169b 198 Gene3D G3DSA:3.40.50.300 6 196 1.9E-11 T 14-10-2018 Atu1008 3dff9be9ccb0e08263da6b82e563169b 198 SUPERFAMILY SSF52540 7 159 2.31E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2657 a12c976b12c76eccbd6fc290988c076c 162 Gene3D G3DSA:1.10.3680.10 2 140 1.4E-22 T 14-10-2018 IPR029024 TerB-like Atu2657 a12c976b12c76eccbd6fc290988c076c 162 SUPERFAMILY SSF158682 1 145 4.84E-30 T 14-10-2018 IPR029024 TerB-like Atu2657 a12c976b12c76eccbd6fc290988c076c 162 Pfam PF05099 Tellurite resistance protein TerB 5 141 7.4E-43 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Atu4622 1609e2f44a9a0a8e12b61f5885f39fbd 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 73 2.0E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu4622 1609e2f44a9a0a8e12b61f5885f39fbd 299 Gene3D G3DSA:1.10.3720.10 85 294 2.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu4622 1609e2f44a9a0a8e12b61f5885f39fbd 299 SUPERFAMILY SSF161098 91 278 3.14E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu4622 1609e2f44a9a0a8e12b61f5885f39fbd 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 295 2.1E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3217 7547f2b085415129ad5bdf1213f68549 372 Pfam PF00266 Aminotransferase class-V 25 310 2.5E-33 T 14-10-2018 IPR000192 Aminotransferase class V domain Atu3217 7547f2b085415129ad5bdf1213f68549 372 SUPERFAMILY SSF53383 18 348 4.41E-65 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu3217 7547f2b085415129ad5bdf1213f68549 372 Gene3D G3DSA:3.90.1150.10 244 357 6.6E-88 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3217 7547f2b085415129ad5bdf1213f68549 372 Gene3D G3DSA:3.40.640.10 19 243 6.6E-88 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3217 7547f2b085415129ad5bdf1213f68549 372 PIRSF PIRSF000524 17 371 5.1E-67 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 Gene3D G3DSA:3.40.50.720 2 259 1.9E-71 T 14-10-2018 Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 SUPERFAMILY SSF51735 5 245 6.67E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu2597 bc11651efaf036ec5fe073f8c35f87e5 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 4.1E-57 T 14-10-2018 Atu0167 e30d8f6e15581829a422045f358867d1 346 SUPERFAMILY SSF46689 291 341 7.62E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0167 e30d8f6e15581829a422045f358867d1 346 Gene3D G3DSA:1.10.10.60 234 345 8.7E-22 T 14-10-2018 Atu0167 e30d8f6e15581829a422045f358867d1 346 Pfam PF12833 Helix-turn-helix domain 262 338 4.0E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu0167 e30d8f6e15581829a422045f358867d1 346 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 207 2.3E-25 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Atu0167 e30d8f6e15581829a422045f358867d1 346 SMART SM00342 255 337 1.2E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1226 1e47f5f9b36f73782bd3fce9f5407232 214 Pfam PF06055 Exopolysaccharide synthesis, ExoD 14 195 1.8E-52 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD Atu1226 1e47f5f9b36f73782bd3fce9f5407232 214 PIRSF PIRSF033239 3 210 2.7E-57 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD Atu2327 cd21f6aac88749fe4b2a28ca7721a475 165 SUPERFAMILY SSF158694 3 163 3.66E-51 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Atu2327 cd21f6aac88749fe4b2a28ca7721a475 165 Pfam PF09349 OHCU decarboxylase 3 159 2.4E-39 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Atu2327 cd21f6aac88749fe4b2a28ca7721a475 165 Gene3D G3DSA:1.10.3330.10 1 165 4.7E-65 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Atu2327 cd21f6aac88749fe4b2a28ca7721a475 165 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 4 161 4.0E-61 T 14-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Atu1104 5a8b3d31ff1da31bf992100ee61ffe65 340 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 37 329 1.8E-99 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Atu1104 5a8b3d31ff1da31bf992100ee61ffe65 340 SUPERFAMILY SSF53659 6 335 3.6E-106 T 14-10-2018 Atu1104 5a8b3d31ff1da31bf992100ee61ffe65 340 Gene3D G3DSA:3.40.718.10 1 337 5.3E-121 T 14-10-2018 Atu1104 5a8b3d31ff1da31bf992100ee61ffe65 340 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 332 7.1E-121 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Atu1104 5a8b3d31ff1da31bf992100ee61ffe65 340 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 336 37.125 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 Gene3D G3DSA:3.30.360.10 128 315 1.4E-138 T 14-10-2018 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 SUPERFAMILY SSF51735 3 157 6.3E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 117 5.8E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 PIRSF PIRSF000148 2 337 2.1E-130 T 14-10-2018 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 SMART SM00859 4 119 7.4E-38 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 Gene3D G3DSA:3.40.50.720 5 330 1.4E-138 T 14-10-2018 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 333 1.2E-141 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 SUPERFAMILY SSF55347 129 319 1.28E-73 T 14-10-2018 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 318 1.1E-53 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Atu2490 a3dd712a7c00fdaa28f795fff621dc8a 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 332 35.815 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Atu3381 9bf71e48d10dd0ff94d55ed471eea58a 301 SUPERFAMILY SSF53850 94 295 8.28E-37 T 14-10-2018 Atu3381 9bf71e48d10dd0ff94d55ed471eea58a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.2E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu3381 9bf71e48d10dd0ff94d55ed471eea58a 301 Gene3D G3DSA:3.40.190.290 94 299 8.6E-38 T 14-10-2018 Atu3381 9bf71e48d10dd0ff94d55ed471eea58a 301 SUPERFAMILY SSF46785 1 87 5.44E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3381 9bf71e48d10dd0ff94d55ed471eea58a 301 Pfam PF03466 LysR substrate binding domain 95 293 5.1E-35 T 14-10-2018 IPR005119 LysR, substrate-binding Atu3381 9bf71e48d10dd0ff94d55ed471eea58a 301 Gene3D G3DSA:1.10.10.10 1 88 3.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4518 5d204c4ff9a88f7fa33adae1dd5e4442 287 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 6.2E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0989 1260cf296df7ed6af9cdf9ef52534842 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 296 9.2E-39 T 14-10-2018 IPR000160 GGDEF domain Atu0989 1260cf296df7ed6af9cdf9ef52534842 301 Gene3D G3DSA:3.30.70.270 137 300 7.6E-51 T 14-10-2018 Atu0989 1260cf296df7ed6af9cdf9ef52534842 301 Pfam PF13188 PAS domain 9 57 0.0019 T 14-10-2018 IPR000014 PAS domain Atu0989 1260cf296df7ed6af9cdf9ef52534842 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 140 293 7.0E-41 T 14-10-2018 IPR000160 GGDEF domain Atu0989 1260cf296df7ed6af9cdf9ef52534842 301 SMART SM00267 129 297 3.9E-54 T 14-10-2018 IPR000160 GGDEF domain Atu0989 1260cf296df7ed6af9cdf9ef52534842 301 SUPERFAMILY SSF55073 144 297 4.94E-43 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0627 0a123a4dd5923dc609b9a6fd3b4333ce 291 Gene3D G3DSA:3.40.50.1820 54 290 8.0E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0627 0a123a4dd5923dc609b9a6fd3b4333ce 291 Pfam PF01738 Dienelactone hydrolase family 79 290 1.6E-51 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Atu0627 0a123a4dd5923dc609b9a6fd3b4333ce 291 SUPERFAMILY SSF53474 67 290 9.38E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2804 e8df15d80dbfd9db6d15497b81d5ea8d 1116 Pfam PF02514 CobN/Magnesium Chelatase 697 1096 1.3E-126 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Atu2804 e8df15d80dbfd9db6d15497b81d5ea8d 1116 Pfam PF02514 CobN/Magnesium Chelatase 141 689 1.0E-136 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 Gene3D G3DSA:3.40.50.720 1 232 6.3E-40 T 14-10-2018 Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.6E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 SUPERFAMILY SSF51735 10 232 1.62E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4839 49ef03fc4a600e61ffb7402326e058d4 232 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 46 197 2.3E-14 T 14-10-2018 Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 SUPERFAMILY SSF48230 160 418 9.15E-24 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 Gene3D G3DSA:2.70.98.70 493 773 1.9E-121 T 14-10-2018 Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 Gene3D G3DSA:1.50.10.100 128 492 9.2E-117 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 Pfam PF07940 Heparinase II/III-like protein 492 664 9.4E-31 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 PIRSF PIRSF034409 6 776 0.0 T 14-10-2018 IPR012364 Oligosaccharide lyase Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 Gene3D G3DSA:2.60.40.10 1 127 9.3E-35 T 14-10-2018 IPR013783 Immunoglobulin-like fold Atu3025 6e5ad9431a64b16c9f22fd7a2f11c984 776 Pfam PF16332 Domain of unknown function (DUF4962) 51 452 5.5E-40 T 14-10-2018 IPR032518 Heparinase II, N-terminal Reactome: R-HSA-2022923 Atu6068 ac1f0c0098de56394a54943145fa1ff7 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 69 330 1.2E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0444 1cfd6c2a4319cced0c2ea57285baf091 99 Gene3D G3DSA:1.10.260.40 36 99 6.4E-16 T 14-10-2018 Atu0444 1cfd6c2a4319cced0c2ea57285baf091 99 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 40 91 2.1E-11 T 14-10-2018 IPR031856 Putative bacterial antitoxin YdaS Atu0444 1cfd6c2a4319cced0c2ea57285baf091 99 SUPERFAMILY SSF47413 41 87 7.97E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu1771 e9211d2d88f7b0bc162ee9c107085d37 306 Pfam PF00892 EamA-like transporter family 162 298 3.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1771 e9211d2d88f7b0bc162ee9c107085d37 306 Pfam PF00892 EamA-like transporter family 15 147 3.1E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1771 e9211d2d88f7b0bc162ee9c107085d37 306 SUPERFAMILY SSF103481 48 150 9.55E-12 T 14-10-2018 Atu1771 e9211d2d88f7b0bc162ee9c107085d37 306 SUPERFAMILY SSF103481 204 299 1.09E-11 T 14-10-2018 Atu4381 014c37340c138386e098a1b5ad2c75e5 305 SUPERFAMILY SSF56436 48 287 2.26E-37 T 14-10-2018 IPR016187 C-type lectin fold Atu4381 014c37340c138386e098a1b5ad2c75e5 305 Pfam PF03781 Sulfatase-modifying factor enzyme 1 48 286 2.3E-43 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Atu4381 014c37340c138386e098a1b5ad2c75e5 305 Gene3D G3DSA:3.90.1580.10 48 288 7.0E-24 T 14-10-2018 Atu4359 79315c552be92481e823cd6a7c2f05fc 275 SUPERFAMILY SSF161098 8 275 4.19E-63 T 14-10-2018 IPR035906 MetI-like superfamily Atu4359 79315c552be92481e823cd6a7c2f05fc 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 269 6.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4359 79315c552be92481e823cd6a7c2f05fc 275 Gene3D G3DSA:1.10.3720.10 4 267 2.5E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu0559 46b9e10eff3df4f01a40740949d939b3 211 SUPERFAMILY SSF158837 1 176 7.32E-66 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0559 46b9e10eff3df4f01a40740949d939b3 211 Pfam PF06748 Protein of unknown function (DUF1217) 13 161 1.3E-56 T 14-10-2018 IPR010626 Protein of unknown function DUF1217 Atu0559 46b9e10eff3df4f01a40740949d939b3 211 Gene3D G3DSA:1.10.3700.10 1 177 2.9E-80 T 14-10-2018 IPR023157 AGR-C-984p-like superfamily Atu0262 497ede02fa9f6701d82a3d271cc57c84 147 Pfam PF00583 Acetyltransferase (GNAT) family 35 131 8.2E-14 T 14-10-2018 IPR000182 GNAT domain Atu0262 497ede02fa9f6701d82a3d271cc57c84 147 SUPERFAMILY SSF55729 3 133 1.05E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0262 497ede02fa9f6701d82a3d271cc57c84 147 Gene3D G3DSA:3.40.630.30 1 144 4.5E-36 T 14-10-2018 Atu0013 2a37eab2477f557b1df9c17339f3c35e 200 Pfam PF00881 Nitroreductase family 19 63 4.1E-14 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu0013 2a37eab2477f557b1df9c17339f3c35e 200 Pfam PF00881 Nitroreductase family 74 162 2.5E-6 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu0013 2a37eab2477f557b1df9c17339f3c35e 200 Gene3D G3DSA:3.40.109.10 1 200 5.6E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu0013 2a37eab2477f557b1df9c17339f3c35e 200 SUPERFAMILY SSF55469 10 196 1.02E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu2181 1cce162f8d63e769582ef6048a515822 410 SMART SM00729 58 285 0.005 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Atu2181 1cce162f8d63e769582ef6048a515822 410 SUPERFAMILY SSF102114 47 193 5.36E-13 T 14-10-2018 Atu2181 1cce162f8d63e769582ef6048a515822 410 Gene3D G3DSA:3.20.20.70 53 206 9.5E-9 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu2181 1cce162f8d63e769582ef6048a515822 410 SUPERFAMILY SSF47781 308 380 3.67E-9 T 14-10-2018 IPR010994 RuvA domain 2-like Atu2181 1cce162f8d63e769582ef6048a515822 410 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 398 2.8E-170 T 14-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative Atu1470 c7b4c18ba132c511cb1b5be46586b1bf 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 20.67 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Atu1470 c7b4c18ba132c511cb1b5be46586b1bf 125 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 2.3E-29 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Atu1470 c7b4c18ba132c511cb1b5be46586b1bf 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 117 1.2E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Atu4136 2f713258ecdb4aaa9725fa4b230b3c6c 166 SUPERFAMILY SSF47240 1 154 1.73E-57 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu4136 2f713258ecdb4aaa9725fa4b230b3c6c 166 Gene3D G3DSA:1.20.1260.10 1 166 8.4E-65 T 14-10-2018 IPR012347 Ferritin-like Atu4136 2f713258ecdb4aaa9725fa4b230b3c6c 166 Pfam PF05974 Domain of unknown function (DUF892) 6 161 2.1E-64 T 14-10-2018 IPR010287 Domain of unknown function DUF892 Atu1325 3bade4b92502e719fd34586cab4507a6 165 Pfam PF13673 Acetyltransferase (GNAT) domain 38 155 3.0E-18 T 14-10-2018 IPR000182 GNAT domain Atu1325 3bade4b92502e719fd34586cab4507a6 165 SUPERFAMILY SSF55729 1 163 1.22E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1325 3bade4b92502e719fd34586cab4507a6 165 Gene3D G3DSA:3.40.630.30 2 153 2.8E-32 T 14-10-2018 Atu4601 92bed4eb3c7c9c7257b2bbf9561be809 275 Pfam PF13276 HTH-like domain 33 85 5.0E-13 T 14-10-2018 IPR025948 HTH-like domain Atu4601 92bed4eb3c7c9c7257b2bbf9561be809 275 Pfam PF00665 Integrase core domain 108 228 3.4E-23 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu4601 92bed4eb3c7c9c7257b2bbf9561be809 275 SUPERFAMILY SSF53098 106 272 2.53E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu4601 92bed4eb3c7c9c7257b2bbf9561be809 275 Gene3D G3DSA:3.30.420.10 106 269 7.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu1802 994d5edd703c968e88c936d31321fcfe 146 Gene3D G3DSA:3.10.180.10 1 132 4.7E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1802 994d5edd703c968e88c936d31321fcfe 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 1.6E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1802 994d5edd703c968e88c936d31321fcfe 146 SUPERFAMILY SSF54593 1 129 4.83E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3500 cd69253a9344d7a9296c3a6bd0ac9262 270 Pfam PF08713 DNA alkylation repair enzyme 28 141 6.1E-5 T 14-10-2018 IPR014825 DNA alkylation repair enzyme Atu3500 cd69253a9344d7a9296c3a6bd0ac9262 270 Gene3D G3DSA:1.25.40.290 26 144 1.0E-35 T 14-10-2018 Atu3500 cd69253a9344d7a9296c3a6bd0ac9262 270 SUPERFAMILY SSF48371 2 144 2.43E-37 T 14-10-2018 IPR016024 Armadillo-type fold Atu1810 c210c9dca59750b9cc51aaf61488e18f 101 Pfam PF04800 ETC complex I subunit conserved region 3 96 6.0E-34 T 14-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 Atu1810 c210c9dca59750b9cc51aaf61488e18f 101 Gene3D G3DSA:3.30.160.190 1 80 2.4E-33 T 14-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu6082 973dfaaa123083b1f82e80e4791fff9a 345 SMART SM00382 139 271 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6082 973dfaaa123083b1f82e80e4791fff9a 345 Gene3D G3DSA:3.40.50.300 92 289 1.1E-44 T 14-10-2018 Atu6082 973dfaaa123083b1f82e80e4791fff9a 345 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 143 266 4.2E-29 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Atu6082 973dfaaa123083b1f82e80e4791fff9a 345 SUPERFAMILY SSF52540 98 337 7.14E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu8161 140c5ccf204d63c8cb31670f120f4945 47 Pfam PF06568 Domain of unknown function (DUF1127) 5 39 8.3E-14 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 Atu3260 ad962b06e7fecc4e67b7a19b4d294ca2 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 316 1.1E-60 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Atu3260 ad962b06e7fecc4e67b7a19b4d294ca2 332 PIRSF PIRSF006470 7 331 5.1E-71 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3260 ad962b06e7fecc4e67b7a19b4d294ca2 332 SUPERFAMILY SSF53850 145 276 9.55E-5 T 14-10-2018 Atu3260 ad962b06e7fecc4e67b7a19b4d294ca2 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 286 1.3E-52 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Atu3260 ad962b06e7fecc4e67b7a19b4d294ca2 332 Gene3D G3DSA:3.40.190.170 32 331 2.5E-79 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Atu1415 2b313143fc4703979229be4f4a0dd78a 257 Pfam PF00106 short chain dehydrogenase 8 206 1.3E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 Gene3D G3DSA:3.40.50.720 1 256 1.3E-76 T 14-10-2018 Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.3E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.8E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1415 2b313143fc4703979229be4f4a0dd78a 257 SUPERFAMILY SSF51735 7 250 2.66E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1415 2b313143fc4703979229be4f4a0dd78a 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu3877 fabbcf4cfa7f286e851791cf5cc805e1 332 SUPERFAMILY SSF51430 8 325 3.01E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3877 fabbcf4cfa7f286e851791cf5cc805e1 332 Gene3D G3DSA:3.20.20.100 7 329 6.6E-103 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu3877 fabbcf4cfa7f286e851791cf5cc805e1 332 Pfam PF00248 Aldo/keto reductase family 21 319 5.0E-64 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu3877 fabbcf4cfa7f286e851791cf5cc805e1 332 PRINTS PR00069 Aldo-keto reductase signature 123 141 1.2E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu3877 fabbcf4cfa7f286e851791cf5cc805e1 332 PRINTS PR00069 Aldo-keto reductase signature 154 171 1.2E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.4E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5210 471b27377c08bff9d198345b81bf966a 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu5210 471b27377c08bff9d198345b81bf966a 259 SUPERFAMILY SSF51735 8 255 3.16E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5210 471b27377c08bff9d198345b81bf966a 259 Gene3D G3DSA:3.40.50.720 1 259 1.0E-65 T 14-10-2018 Atu5210 471b27377c08bff9d198345b81bf966a 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 254 7.3E-40 T 14-10-2018 Atu0415 a21bd4d8df6b7c2d884f5e211110e578 320 Pfam PF03060 Nitronate monooxygenase 13 307 3.9E-20 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Atu0415 a21bd4d8df6b7c2d884f5e211110e578 320 Gene3D G3DSA:3.20.20.70 8 319 5.0E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0415 a21bd4d8df6b7c2d884f5e211110e578 320 SUPERFAMILY SSF51412 6 295 3.3E-58 T 14-10-2018 Atu1100 d2ca5a52ade6eaf0616a9f9e57d4b238 295 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 295 2.4E-63 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Atu1100 d2ca5a52ade6eaf0616a9f9e57d4b238 295 Pfam PF08340 Domain of unknown function (DUF1732) 212 295 1.2E-32 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 Atu1100 d2ca5a52ade6eaf0616a9f9e57d4b238 295 Pfam PF03755 YicC-like family, N-terminal region 3 157 7.5E-35 T 14-10-2018 IPR013527 YicC-like, N-terminal Atu4238 b67f816a3c955e423ffb92874e18c845 281 Gene3D G3DSA:3.40.50.1820 28 277 2.7E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4238 b67f816a3c955e423ffb92874e18c845 281 SUPERFAMILY SSF53474 30 275 5.54E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4238 b67f816a3c955e423ffb92874e18c845 281 Pfam PF12697 Alpha/beta hydrolase family 40 268 9.7E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu1214 449187921bb5b4df01a1ba6ead204d28 214 Gene3D G3DSA:3.40.430.10 1 211 2.5E-46 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu1214 449187921bb5b4df01a1ba6ead204d28 214 SUPERFAMILY SSF53597 5 194 1.1E-28 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu1214 449187921bb5b4df01a1ba6ead204d28 214 Pfam PF01872 RibD C-terminal domain 5 201 2.0E-21 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Atu1872 ddf1c44b07cd50771b85113ed2123ccf 127 SUPERFAMILY SSF54593 1 120 5.09E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1872 ddf1c44b07cd50771b85113ed2123ccf 127 Gene3D G3DSA:3.10.180.10 1 125 3.2E-43 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1872 ddf1c44b07cd50771b85113ed2123ccf 127 Pfam PF12681 Glyoxalase-like domain 3 123 4.9E-46 T 14-10-2018 IPR025870 Glyoxalase-like domain Atu3576 d109ef99c4da632e656ddd93b24164b1 346 Pfam PF13407 Periplasmic binding protein domain 28 285 7.3E-60 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3576 d109ef99c4da632e656ddd93b24164b1 346 Gene3D G3DSA:3.40.50.2300 128 319 5.1E-96 T 14-10-2018 Atu3576 d109ef99c4da632e656ddd93b24164b1 346 SUPERFAMILY SSF53822 25 320 9.27E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3576 d109ef99c4da632e656ddd93b24164b1 346 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 332 5.4E-129 T 14-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 Atu3576 d109ef99c4da632e656ddd93b24164b1 346 Gene3D G3DSA:3.40.50.2300 29 309 5.1E-96 T 14-10-2018 Atu4031 09399e83e252a185625740001c59f95e 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 297 5.9E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu2459 efbaa5a23d59963a7bdd7761967d8d59 362 SUPERFAMILY SSF81345 20 351 5.75E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu2459 efbaa5a23d59963a7bdd7761967d8d59 362 Pfam PF01032 FecCD transport family 32 351 7.4E-90 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu2459 efbaa5a23d59963a7bdd7761967d8d59 362 Gene3D G3DSA:1.10.3470.10 18 356 7.0E-99 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu2266 ac16a2fbab86c5794ee41f54c67bed29 360 Pfam PF13449 Esterase-like activity of phytase 43 340 2.5E-77 T 14-10-2018 IPR027372 Phytase-like domain Atu2266 ac16a2fbab86c5794ee41f54c67bed29 360 SUPERFAMILY SSF101898 43 339 5.75E-9 T 14-10-2018 Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 SUPERFAMILY SSF109755 327 532 5.65E-36 T 14-10-2018 Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 Gene3D G3DSA:1.20.58.220 440 533 4.0E-10 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 Gene3D G3DSA:1.20.58.220 333 422 1.9E-10 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 Pfam PF01895 PhoU domain 446 529 6.4E-8 T 14-10-2018 IPR026022 PhoU domain Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 Pfam PF01895 PhoU domain 342 419 2.2E-9 T 14-10-2018 IPR026022 PhoU domain Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 70 521 4.7E-166 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Atu6136 d3f3fc4192d6c806a53102e48613a88a 550 Pfam PF02690 Na+/Pi-cotransporter 16 150 1.1E-31 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Atu2558 f85dd48531fbcb9d216e13037fb823d2 78 Pfam PF01037 Lrp/AsnC ligand binding domain 6 73 4.6E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Atu2558 f85dd48531fbcb9d216e13037fb823d2 78 SUPERFAMILY SSF54909 4 76 2.01E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu2558 f85dd48531fbcb9d216e13037fb823d2 78 Gene3D G3DSA:3.30.70.920 4 77 1.6E-18 T 14-10-2018 Atu4336 6e471140a514baa487314f9b4ffdc743 334 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 36 310 4.3E-80 T 14-10-2018 IPR010732 Type VI secretion, TssG-like Atu4336 6e471140a514baa487314f9b4ffdc743 334 Pfam PF06996 Type VI secretion, TssG 51 309 4.2E-60 T 14-10-2018 IPR010732 Type VI secretion, TssG-like Atu1473 9cbb5d9645a4dd2b586ce44d6b0b600f 264 Gene3D G3DSA:1.10.3580.10 90 263 2.7E-64 T 14-10-2018 IPR023335 ATP12 orthogonal Bundle domain superfamily Atu1473 9cbb5d9645a4dd2b586ce44d6b0b600f 264 Pfam PF07542 ATP12 chaperone protein 31 149 2.2E-34 T 14-10-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 Atu1473 9cbb5d9645a4dd2b586ce44d6b0b600f 264 Gene3D G3DSA:3.30.2180.10 1 89 2.1E-24 T 14-10-2018 Atu1473 9cbb5d9645a4dd2b586ce44d6b0b600f 264 SUPERFAMILY SSF160909 2 257 3.14E-89 T 14-10-2018 Atu5427 0362d8fa804a05ef9444a0ea57e32f6e 192 SUPERFAMILY SSF69118 12 189 2.55E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu5427 0362d8fa804a05ef9444a0ea57e32f6e 192 Pfam PF02627 Carboxymuconolactone decarboxylase family 61 124 1.5E-9 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Atu5427 0362d8fa804a05ef9444a0ea57e32f6e 192 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 17 192 1.5E-71 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related Atu5427 0362d8fa804a05ef9444a0ea57e32f6e 192 Gene3D G3DSA:1.20.1290.10 75 192 9.2E-32 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Atu3434 c0696146d2bb12e0e174ee185892ede2 329 Gene3D G3DSA:1.10.3720.10 93 321 3.2E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu3434 c0696146d2bb12e0e174ee185892ede2 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 325 1.6E-44 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3434 c0696146d2bb12e0e174ee185892ede2 329 SUPERFAMILY SSF161098 98 314 2.09E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu0761 30ef73395cf15826bf1ddeebe947a0a3 239 Pfam PF01925 Sulfite exporter TauE/SafE 3 228 2.8E-21 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu1573 6b864602f4e4bf685039d848e4ea7c37 81 Gene3D G3DSA:2.60.260.40 1 81 2.7E-41 T 14-10-2018 Atu1573 6b864602f4e4bf685039d848e4ea7c37 81 Pfam PF10276 Zinc-finger domain 24 58 1.1E-10 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4620 cb543a9fc72b49a88987ac2e809783ab 245 SMART SM00382 30 216 3.1E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4620 cb543a9fc72b49a88987ac2e809783ab 245 Gene3D G3DSA:3.40.50.300 1 243 9.0E-76 T 14-10-2018 Atu4620 cb543a9fc72b49a88987ac2e809783ab 245 SUPERFAMILY SSF52540 1 226 2.4E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4620 cb543a9fc72b49a88987ac2e809783ab 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu4620 cb543a9fc72b49a88987ac2e809783ab 245 Pfam PF00005 ABC transporter 22 167 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 Gene3D G3DSA:1.10.455.10 2 156 6.0E-63 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.6E-69 T 14-10-2018 IPR023798 Ribosomal protein S7 domain Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 SUPERFAMILY SSF47973 4 149 6.67E-65 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.345 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.9E-69 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Atu1950 075eb4b91be577069f2c258e81d2f9f9 156 PIRSF PIRSF002122 2 156 6.7E-64 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Atu5249 bcf28b90a4bb43239fb6d4df120e1498 379 Gene3D G3DSA:3.40.190.10 39 324 1.8E-21 T 14-10-2018 Atu5249 bcf28b90a4bb43239fb6d4df120e1498 379 SUPERFAMILY SSF53850 33 373 1.52E-35 T 14-10-2018 Atu5249 bcf28b90a4bb43239fb6d4df120e1498 379 Pfam PF13416 Bacterial extracellular solute-binding protein 59 320 3.0E-13 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu5249 bcf28b90a4bb43239fb6d4df120e1498 379 Gene3D G3DSA:3.40.190.10 146 281 1.8E-21 T 14-10-2018 Atu3620 6df445210b6e010eabf84f5c93f3b09e 341 Pfam PF13449 Esterase-like activity of phytase 75 326 1.2E-40 T 14-10-2018 IPR027372 Phytase-like domain Atu3620 6df445210b6e010eabf84f5c93f3b09e 341 PIRSF PIRSF031900 1 341 2.8E-164 T 14-10-2018 IPR014567 Uncharacterised conserved protein UCP031900 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 Gene3D G3DSA:3.30.930.10 1 334 1.8E-115 T 14-10-2018 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 SUPERFAMILY SSF55681 89 334 2.21E-78 T 14-10-2018 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 SUPERFAMILY SSF46589 2 88 4.92E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 9 76 2.8E-21 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 333 43.735 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 Pfam PF01409 tRNA synthetases class II core domain (F) 81 332 2.1E-103 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Atu0258 a72cdbb7331cbf414d77407b5def2803 349 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 28 332 7.8E-102 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Atu8042 16947f99cd4684fe05cb7b1fec5bd70a 221 Gene3D G3DSA:3.30.1330.80 63 214 1.6E-8 T 14-10-2018 Atu8042 16947f99cd4684fe05cb7b1fec5bd70a 221 SUPERFAMILY SSF117856 63 207 3.66E-19 T 14-10-2018 Atu6184 37931ea5958b77bae16f3c36f51c1fc1 668 SUPERFAMILY SSF52540 137 540 2.07E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6184 37931ea5958b77bae16f3c36f51c1fc1 668 Gene3D G3DSA:3.40.50.300 288 539 1.9E-42 T 14-10-2018 Atu6184 37931ea5958b77bae16f3c36f51c1fc1 668 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 97 537 2.5E-160 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Atu0841 b115e420a51781ce9efdecd68396690b 321 SUPERFAMILY SSF53474 78 320 1.12E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0841 b115e420a51781ce9efdecd68396690b 321 Gene3D G3DSA:3.40.50.1820 57 320 1.2E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0841 b115e420a51781ce9efdecd68396690b 321 Pfam PF00326 Prolyl oligopeptidase family 145 242 7.0E-11 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Atu3048 c2868b638d4234ec284aaede69f44799 316 Gene3D G3DSA:1.10.3720.10 87 309 3.0E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu3048 c2868b638d4234ec284aaede69f44799 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 314 3.0E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3048 c2868b638d4234ec284aaede69f44799 316 SUPERFAMILY SSF161098 92 302 8.99E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu1486 b3adc5eda05b5de40f264ae167868b3e 129 Pfam PF03640 Secreted repeat of unknown function 87 128 4.2E-19 T 14-10-2018 IPR005297 Lipoprotein repeat Atu1486 b3adc5eda05b5de40f264ae167868b3e 129 Pfam PF03640 Secreted repeat of unknown function 33 72 3.1E-14 T 14-10-2018 IPR005297 Lipoprotein repeat Atu1486 b3adc5eda05b5de40f264ae167868b3e 129 PIRSF PIRSF029720 1 129 3.7E-51 T 14-10-2018 IPR014558 Uncharacterised conserved lipoprotein Atu3819 04121a798a0dac17b0f38ac501b5b9a2 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 320 2.3E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5086 854e133e9baf18eaee9b6524c079be85 480 SUPERFAMILY SSF52540 249 471 4.03E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5086 854e133e9baf18eaee9b6524c079be85 480 Pfam PF06745 KaiC 11 237 1.7E-37 T 14-10-2018 IPR014774 KaiC-like domain Atu5086 854e133e9baf18eaee9b6524c079be85 480 Pfam PF06745 KaiC 253 471 1.2E-30 T 14-10-2018 IPR014774 KaiC-like domain Atu5086 854e133e9baf18eaee9b6524c079be85 480 PIRSF PIRSF039117 3 476 5.6E-105 T 14-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Atu5086 854e133e9baf18eaee9b6524c079be85 480 SUPERFAMILY SSF52540 10 237 1.51E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5086 854e133e9baf18eaee9b6524c079be85 480 Gene3D G3DSA:3.40.50.300 7 244 2.3E-46 T 14-10-2018 Atu5086 854e133e9baf18eaee9b6524c079be85 480 Gene3D G3DSA:3.40.50.300 245 473 7.0E-42 T 14-10-2018 Atu5086 854e133e9baf18eaee9b6524c079be85 480 SMART SM00382 270 435 0.4 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5086 854e133e9baf18eaee9b6524c079be85 480 SMART SM00382 27 137 0.21 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1740 f8abfdb58e07a6a7a64ed9ffbf68f9d1 151 SUPERFAMILY SSF55729 18 151 2.4E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1740 f8abfdb58e07a6a7a64ed9ffbf68f9d1 151 Pfam PF00583 Acetyltransferase (GNAT) family 41 129 1.4E-14 T 14-10-2018 IPR000182 GNAT domain Atu1740 f8abfdb58e07a6a7a64ed9ffbf68f9d1 151 Gene3D G3DSA:3.40.630.30 2 151 9.7E-41 T 14-10-2018 Atu0962 7bbba58effa89448c2bd0aa2cb4d3c92 134 Gene3D G3DSA:3.30.2020.20 10 105 2.3E-23 T 14-10-2018 Atu0962 7bbba58effa89448c2bd0aa2cb4d3c92 134 Pfam PF10387 Protein of unknown function (DUF2442) 27 96 1.8E-16 T 14-10-2018 IPR018841 Protein of unknown function DUF2442 Atu8204 76eddadf029b2cb9e57510562c6b716c 53 Gene3D G3DSA:3.40.50.1820 1 53 1.2E-17 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu8204 76eddadf029b2cb9e57510562c6b716c 53 SUPERFAMILY SSF53474 3 53 7.76E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1849 39e6fc87d880f0fd440ea6ece1d6ecdd 196 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 114 195 8.5E-20 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related Atu1849 39e6fc87d880f0fd440ea6ece1d6ecdd 196 Gene3D G3DSA:2.40.160.20 93 194 1.3E-6 T 14-10-2018 Atu3451 9f52b533898ee549d5b5473b49869a19 342 Pfam PF00296 Luciferase-like monooxygenase 24 264 1.8E-24 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3451 9f52b533898ee549d5b5473b49869a19 342 SUPERFAMILY SSF51679 11 324 3.79E-47 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3451 9f52b533898ee549d5b5473b49869a19 342 Gene3D G3DSA:3.20.20.30 16 307 3.4E-46 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu2127 2013e0a362597f36fbbb7d186c374d6e 400 Gene3D G3DSA:3.30.1540.10 238 329 1.7E-142 T 14-10-2018 Atu2127 2013e0a362597f36fbbb7d186c374d6e 400 SUPERFAMILY SSF89796 9 391 5.1E-139 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Atu2127 2013e0a362597f36fbbb7d186c374d6e 400 Gene3D G3DSA:3.40.50.10540 10 366 1.7E-142 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Atu2127 2013e0a362597f36fbbb7d186c374d6e 400 Pfam PF02515 CoA-transferase family III 11 384 1.6E-128 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Atu3055 46b940b5317c8e48cca094793137b3d3 421 Gene3D G3DSA:1.50.10.20 105 280 2.8E-6 T 14-10-2018 Atu3055 46b940b5317c8e48cca094793137b3d3 421 SUPERFAMILY SSF48239 74 343 1.0E-13 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Atu5517 c5cc6310dbab9071cf24fae2fc0f1448 86 SUPERFAMILY SSF103481 6 74 2.88E-9 T 14-10-2018 Atu2117 2f9ebb6c9a56adff612f1eeac3191dd5 358 Pfam PF01464 Transglycosylase SLT domain 250 342 1.2E-13 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu2117 2f9ebb6c9a56adff612f1eeac3191dd5 358 SUPERFAMILY SSF53955 246 352 1.72E-24 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu2117 2f9ebb6c9a56adff612f1eeac3191dd5 358 Gene3D G3DSA:1.10.530.10 237 351 1.6E-17 T 14-10-2018 Atu0397 c2ce4fdea03a193c9008e79c705ee5e7 440 PIRSF PIRSF033909 1 367 1.1E-161 T 14-10-2018 IPR014586 Uncharacterised conserved protein UCP033909 Atu0397 c2ce4fdea03a193c9008e79c705ee5e7 440 SUPERFAMILY SSF53474 89 289 1.39E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu0397 c2ce4fdea03a193c9008e79c705ee5e7 440 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 110 336 1.7E-88 T 14-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like Atu4374 36526a4163f1d126e168e64cf1e361c4 349 Gene3D G3DSA:3.20.20.150 19 324 3.2E-68 T 14-10-2018 Atu4374 36526a4163f1d126e168e64cf1e361c4 349 Pfam PF07582 AP endonuclease family 2 C terminus 279 333 6.6E-21 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Atu4374 36526a4163f1d126e168e64cf1e361c4 349 Pfam PF01261 Xylose isomerase-like TIM barrel 29 278 6.0E-37 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4374 36526a4163f1d126e168e64cf1e361c4 349 SUPERFAMILY SSF51658 8 322 5.94E-62 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu5280 98d3c6804bf5822333b0b0810defb092 192 Gene3D G3DSA:3.40.50.850 1 188 2.3E-25 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu5280 98d3c6804bf5822333b0b0810defb092 192 SUPERFAMILY SSF52499 1 180 1.18E-33 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu5280 98d3c6804bf5822333b0b0810defb092 192 Pfam PF00857 Isochorismatase family 1 167 3.9E-24 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu0143 cebc315286d73b6f65734e3309b39051 440 Gene3D G3DSA:1.20.1250.20 28 440 3.4E-37 T 14-10-2018 Atu0143 cebc315286d73b6f65734e3309b39051 440 SUPERFAMILY SSF103473 27 433 6.54E-38 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0143 cebc315286d73b6f65734e3309b39051 440 Pfam PF00083 Sugar (and other) transporter 33 250 3.9E-14 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Atu0143 cebc315286d73b6f65734e3309b39051 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 310 327 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Atu1720 76223e2493541bfa5ff1d437df79f168 333 Pfam PF10691 Protein of unknown function (DUF2497) 263 329 9.5E-24 T 14-10-2018 IPR019632 Protein of unknown function DUF2497 Atu4746 7acabc8788511c66c9a7086f7ddd1d6c 338 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 311 2.0E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu3369 5763053487e000b17d5c3d35d1c0e121 251 SUPERFAMILY SSF52317 1 247 1.83E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3369 5763053487e000b17d5c3d35d1c0e121 251 Pfam PF07722 Peptidase C26 4 223 2.8E-75 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Atu3369 5763053487e000b17d5c3d35d1c0e121 251 Gene3D G3DSA:3.40.50.880 2 251 2.3E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4377 0a778032bf8e1f05275437d19b4e1950 561 Gene3D G3DSA:3.50.50.60 1 170 4.3E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4377 0a778032bf8e1f05275437d19b4e1950 561 SUPERFAMILY SSF51905 1 556 7.63E-64 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4377 0a778032bf8e1f05275437d19b4e1950 561 Gene3D G3DSA:3.50.50.60 196 346 1.2E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4377 0a778032bf8e1f05275437d19b4e1950 561 Gene3D G3DSA:3.50.50.60 465 560 9.0E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4377 0a778032bf8e1f05275437d19b4e1950 561 Pfam PF05199 GMC oxidoreductase 425 548 1.1E-20 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Atu4377 0a778032bf8e1f05275437d19b4e1950 561 SUPERFAMILY SSF54373 347 497 1.22E-48 T 14-10-2018 Atu4377 0a778032bf8e1f05275437d19b4e1950 561 Pfam PF00732 GMC oxidoreductase 90 312 3.8E-8 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Atu2742 12f066f53071c3db896d49731cca6815 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 152 1.2E-29 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 Pfam PF03466 LysR substrate binding domain 95 291 1.7E-37 T 14-10-2018 IPR005119 LysR, substrate-binding Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 SUPERFAMILY SSF46785 4 86 1.61E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 Gene3D G3DSA:1.10.10.10 7 95 5.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 SUPERFAMILY SSF53850 95 294 6.83E-40 T 14-10-2018 Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 Gene3D G3DSA:3.40.190.10 103 288 4.4E-60 T 14-10-2018 Atu2078 a52558472384f1fb4b265f0f5f5f0302 300 Gene3D G3DSA:3.40.190.10 163 261 4.4E-60 T 14-10-2018 Atu1491 7575c5351e133c902504f04465ce41c5 352 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 329 7.8E-111 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Atu1491 7575c5351e133c902504f04465ce41c5 352 Gene3D G3DSA:1.20.1530.20 1 336 3.3E-14 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Atu1491 7575c5351e133c902504f04465ce41c5 352 PIRSF PIRSF005508 1 346 8.7E-116 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Atu1491 7575c5351e133c902504f04465ce41c5 352 Pfam PF01758 Sodium Bile acid symporter family 47 242 2.5E-34 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Atu4845 3d6ba9d0cc845ec2231437f99722480e 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 321 3.3E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5494 361fc0311e065969711344125ef03120 164 Pfam PF05974 Domain of unknown function (DUF892) 3 157 3.0E-57 T 14-10-2018 IPR010287 Domain of unknown function DUF892 Atu5494 361fc0311e065969711344125ef03120 164 SUPERFAMILY SSF47240 1 156 1.54E-47 T 14-10-2018 IPR009078 Ferritin-like superfamily Atu5494 361fc0311e065969711344125ef03120 164 Gene3D G3DSA:1.20.1260.10 1 162 3.4E-59 T 14-10-2018 IPR012347 Ferritin-like Atu0273 295dd5b425cd564e388d9a5df5ed84f4 287 Pfam PF00892 EamA-like transporter family 12 137 6.9E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0273 295dd5b425cd564e388d9a5df5ed84f4 287 Pfam PF00892 EamA-like transporter family 147 279 1.1E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0273 295dd5b425cd564e388d9a5df5ed84f4 287 SUPERFAMILY SSF103481 181 284 6.02E-15 T 14-10-2018 Atu0273 295dd5b425cd564e388d9a5df5ed84f4 287 SUPERFAMILY SSF103481 51 140 1.05E-9 T 14-10-2018 Atu1357 16c46867c29b842acc921b12f53ca100 492 Pfam PF04317 YcjX-like family, DUF463 31 491 2.8E-176 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Atu1357 16c46867c29b842acc921b12f53ca100 492 PIRSF PIRSF019381 4 492 1.6E-169 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Atu5529 bdd7d754b12381a31ad21c1d6373e3f9 383 Gene3D G3DSA:3.40.50.2300 9 337 4.1E-131 T 14-10-2018 Atu5529 bdd7d754b12381a31ad21c1d6373e3f9 383 Gene3D G3DSA:3.40.50.2300 122 354 4.1E-131 T 14-10-2018 Atu5529 bdd7d754b12381a31ad21c1d6373e3f9 383 Pfam PF13433 Periplasmic binding protein domain 7 368 2.3E-139 T 14-10-2018 Atu5529 bdd7d754b12381a31ad21c1d6373e3f9 383 SUPERFAMILY SSF53822 8 366 7.06E-90 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu6193 fe45b43eb6ca2ba7097ddf9a22c37283 243 Gene3D G3DSA:3.20.20.150 3 213 8.9E-31 T 14-10-2018 Atu6193 fe45b43eb6ca2ba7097ddf9a22c37283 243 SUPERFAMILY SSF51658 17 212 9.17E-31 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu6193 fe45b43eb6ca2ba7097ddf9a22c37283 243 Pfam PF01261 Xylose isomerase-like TIM barrel 25 212 7.1E-23 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu3282 e7a4745b0963a521e099c34be87ea31c 416 SUPERFAMILY SSF53850 39 394 1.57E-80 T 14-10-2018 Atu3282 e7a4745b0963a521e099c34be87ea31c 416 Gene3D G3DSA:3.40.190.10 142 408 2.4E-95 T 14-10-2018 Atu3282 e7a4745b0963a521e099c34be87ea31c 416 Pfam PF01547 Bacterial extracellular solute-binding protein 43 328 1.7E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3282 e7a4745b0963a521e099c34be87ea31c 416 Gene3D G3DSA:3.40.190.10 51 369 2.4E-95 T 14-10-2018 Atu1245 6c3e5cd61da6da8226b8745d72e7b618 317 TIGRFAM TIGR01230 agmatinase: agmatinase 44 307 2.5E-66 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Atu1245 6c3e5cd61da6da8226b8745d72e7b618 317 Gene3D G3DSA:3.40.800.10 3 315 1.7E-95 T 14-10-2018 Atu1245 6c3e5cd61da6da8226b8745d72e7b618 317 Pfam PF00491 Arginase family 44 306 4.7E-78 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu1245 6c3e5cd61da6da8226b8745d72e7b618 317 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Atu1245 6c3e5cd61da6da8226b8745d72e7b618 317 PIRSF PIRSF036979 22 312 9.2E-80 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Atu1245 6c3e5cd61da6da8226b8745d72e7b618 317 SUPERFAMILY SSF52768 22 310 2.52E-85 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Atu4364 d2560e3728e07b4e468bf768563121b8 354 Gene3D G3DSA:1.10.260.40 2 58 4.5E-18 T 14-10-2018 Atu4364 d2560e3728e07b4e468bf768563121b8 354 SMART SM00354 1 71 6.1E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4364 d2560e3728e07b4e468bf768563121b8 354 Gene3D G3DSA:3.40.50.2300 80 313 1.3E-63 T 14-10-2018 Atu4364 d2560e3728e07b4e468bf768563121b8 354 SUPERFAMILY SSF53822 75 314 2.36E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4364 d2560e3728e07b4e468bf768563121b8 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 48 5.9E-10 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4364 d2560e3728e07b4e468bf768563121b8 354 SUPERFAMILY SSF47413 3 59 1.07E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4364 d2560e3728e07b4e468bf768563121b8 354 Gene3D G3DSA:3.40.50.2300 166 295 1.3E-63 T 14-10-2018 Atu4364 d2560e3728e07b4e468bf768563121b8 354 Pfam PF13377 Periplasmic binding protein-like domain 174 338 5.4E-23 T 14-10-2018 Atu1863 0f90b1d1f272611b5e75719835b074a9 297 SUPERFAMILY SSF103481 40 132 1.05E-11 T 14-10-2018 Atu1863 0f90b1d1f272611b5e75719835b074a9 297 Pfam PF00892 EamA-like transporter family 6 131 1.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1863 0f90b1d1f272611b5e75719835b074a9 297 Pfam PF00892 EamA-like transporter family 141 280 2.2E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1863 0f90b1d1f272611b5e75719835b074a9 297 SUPERFAMILY SSF103481 185 284 4.45E-10 T 14-10-2018 Atu2810 a1bc36e3d40b533500962e5452899eb0 348 Gene3D G3DSA:3.40.640.10 45 253 5.4E-51 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu2810 a1bc36e3d40b533500962e5452899eb0 348 SUPERFAMILY SSF53383 14 341 4.81E-54 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu2810 a1bc36e3d40b533500962e5452899eb0 348 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 15 340 2.7E-102 T 14-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Atu2810 a1bc36e3d40b533500962e5452899eb0 348 Pfam PF00155 Aminotransferase class I and II 55 304 3.7E-28 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu2810 a1bc36e3d40b533500962e5452899eb0 348 Gene3D G3DSA:3.90.1150.10 33 317 5.4E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu3820 0ed298b3cc4a6f483d19f7d2f98ebaa5 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 301 2.5E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0014 a87933ee9a00dac158474f88a88d12ec 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 276 4.0E-71 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Atu0014 a87933ee9a00dac158474f88a88d12ec 280 Gene3D G3DSA:3.90.850.10 66 279 3.4E-87 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu0014 a87933ee9a00dac158474f88a88d12ec 280 SUPERFAMILY SSF56529 61 277 1.83E-81 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Atu0660 d62008ac8b84d1415e6d40466bad2fc9 248 SUPERFAMILY SSF56784 3 244 3.1E-26 T 14-10-2018 IPR036412 HAD-like superfamily Atu0660 d62008ac8b84d1415e6d40466bad2fc9 248 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 202 2.5E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Atu0660 d62008ac8b84d1415e6d40466bad2fc9 248 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 5 245 4.0E-74 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Atu0660 d62008ac8b84d1415e6d40466bad2fc9 248 Gene3D G3DSA:3.90.1070.10 94 163 4.6E-65 T 14-10-2018 Atu0660 d62008ac8b84d1415e6d40466bad2fc9 248 Gene3D G3DSA:3.40.50.1000 6 242 4.6E-65 T 14-10-2018 IPR023214 HAD superfamily Atu4318 77ce4ddd352577f96b44d1d3797918af 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 140 1.3E-23 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Atu4318 77ce4ddd352577f96b44d1d3797918af 350 Gene3D G3DSA:3.40.50.720 158 294 3.4E-97 T 14-10-2018 Atu4318 77ce4ddd352577f96b44d1d3797918af 350 SMART SM00829 10 340 3.5E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Atu4318 77ce4ddd352577f96b44d1d3797918af 350 Pfam PF00107 Zinc-binding dehydrogenase 181 308 2.7E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Atu4318 77ce4ddd352577f96b44d1d3797918af 350 SUPERFAMILY SSF51735 144 313 9.15E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4318 77ce4ddd352577f96b44d1d3797918af 350 SUPERFAMILY SSF50129 1 179 3.65E-49 T 14-10-2018 IPR011032 GroES-like superfamily Atu4318 77ce4ddd352577f96b44d1d3797918af 350 Gene3D G3DSA:3.90.180.10 27 333 3.4E-97 T 14-10-2018 Atu4318 77ce4ddd352577f96b44d1d3797918af 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Atu0848 09453cbb9ba00c5a4cad703939704c0c 127 Pfam PF09722 Protein of unknown function (DUF2384) 76 124 7.0E-12 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 Atu5143 12129d671f26e7c89b470bd7a67e7e17 274 Gene3D G3DSA:2.160.10.10 78 274 3.1E-54 T 14-10-2018 Atu5143 12129d671f26e7c89b470bd7a67e7e17 274 SUPERFAMILY SSF51161 87 271 1.66E-39 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Atu5143 12129d671f26e7c89b470bd7a67e7e17 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 180 214 9.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Atu5143 12129d671f26e7c89b470bd7a67e7e17 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 189 217 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Atu4332 0e76b5e71404b7c58d2d600ec49e9720 1159 Pfam PF14331 ImcF-related N-terminal domain 203 442 2.6E-78 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain Atu4332 0e76b5e71404b7c58d2d600ec49e9720 1159 Pfam PF06744 Type VI secretion protein IcmF C-terminal 911 1108 6.5E-52 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal Atu4332 0e76b5e71404b7c58d2d600ec49e9720 1159 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 26 1156 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF Atu4332 0e76b5e71404b7c58d2d600ec49e9720 1159 SUPERFAMILY SSF52540 107 295 1.28E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4332 0e76b5e71404b7c58d2d600ec49e9720 1159 Pfam PF06761 Intracellular multiplication and human macrophage-killing 496 793 6.8E-60 T 14-10-2018 IPR009612 ImcF-related Atu1051 57506a9ff00fbc9b65df1b6c4b5b6e47 172 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 87 97 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Atu1051 57506a9ff00fbc9b65df1b6c4b5b6e47 172 SUPERFAMILY SSF52799 60 154 5.94E-15 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu1051 57506a9ff00fbc9b65df1b6c4b5b6e47 172 Gene3D G3DSA:3.90.190.10 7 134 6.7E-8 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Atu0516 cea87551b12a318cbd6c146573a8cbae 121 SUPERFAMILY SSF52172 3 120 1.57E-36 T 14-10-2018 IPR011006 CheY-like superfamily Atu0516 cea87551b12a318cbd6c146573a8cbae 121 Pfam PF00072 Response regulator receiver domain 5 117 4.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0516 cea87551b12a318cbd6c146573a8cbae 121 SMART SM00448 3 116 6.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu0516 cea87551b12a318cbd6c146573a8cbae 121 Gene3D G3DSA:3.40.50.12740 2 121 2.9E-37 T 14-10-2018 Atu4709 69cb113dbc3c1f32e99c668165a1b679 114 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 9 67 2.8E-23 T 14-10-2018 IPR021074 Formate dehydrogenase, delta subunit Atu1544 23dd71574fa0ad7aa03143f45de0b75a 230 Pfam PF04654 Protein of unknown function, DUF599 8 219 2.6E-57 T 14-10-2018 IPR006747 Protein of unknown function DUF599 Atu5013 d74f3c0c994d955542b4542376b9ceb3 82 Pfam PF07704 Rv0623-like transcription factor 6 51 4.4E-7 T 14-10-2018 IPR011660 Antitoxin VapB-like Atu6078 3cf061188882437aa94dd7a895160ea1 408 Gene3D G3DSA:3.20.20.30 36 405 4.2E-85 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu6078 3cf061188882437aa94dd7a895160ea1 408 Pfam PF00296 Luciferase-like monooxygenase 41 377 1.1E-76 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu6078 3cf061188882437aa94dd7a895160ea1 408 SUPERFAMILY SSF51679 37 406 3.93E-83 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu4830 ba9f3cbf12b8b967d1d1a928698f685e 231 Pfam PF08808 RES domain 77 219 5.6E-27 T 14-10-2018 IPR014914 RES domain Atu4830 ba9f3cbf12b8b967d1d1a928698f685e 231 SMART SM00953 84 212 6.7E-19 T 14-10-2018 IPR014914 RES domain Atu1086 1a405a8056a76da41ce079e3be702dc8 540 Gene3D G3DSA:1.20.1250.20 18 213 6.8E-14 T 14-10-2018 Atu1086 1a405a8056a76da41ce079e3be702dc8 540 Pfam PF07690 Major Facilitator Superfamily 31 392 6.0E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1086 1a405a8056a76da41ce079e3be702dc8 540 SUPERFAMILY SSF103473 14 203 4.58E-19 T 14-10-2018 IPR036259 MFS transporter superfamily Atu1428 02dcd41b0f7eb29fd33b6380ed119ed9 105 Pfam PF04977 Septum formation initiator 23 101 1.9E-17 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Atu1091 ae7b4b059fec5af7f9b7c5c11be192db 153 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 21.202 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Atu1091 ae7b4b059fec5af7f9b7c5c11be192db 153 Gene3D G3DSA:3.30.70.60 1 101 3.5E-29 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Atu1091 ae7b4b059fec5af7f9b7c5c11be192db 153 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 9.1E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1091 ae7b4b059fec5af7f9b7c5c11be192db 153 Pfam PF01250 Ribosomal protein S6 4 91 4.5E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1091 ae7b4b059fec5af7f9b7c5c11be192db 153 SUPERFAMILY SSF54995 1 104 2.62E-34 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2458 565f49d7a0bd51013107738d99de69f3 260 SMART SM00382 26 216 5.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu2458 565f49d7a0bd51013107738d99de69f3 260 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu2458 565f49d7a0bd51013107738d99de69f3 260 Pfam PF00005 ABC transporter 17 168 4.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu2458 565f49d7a0bd51013107738d99de69f3 260 Gene3D G3DSA:3.40.50.300 1 244 2.5E-63 T 14-10-2018 Atu2458 565f49d7a0bd51013107738d99de69f3 260 SUPERFAMILY SSF52540 6 222 2.28E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5544 534521ffcfa7bbba20246fef51934257 124 SUPERFAMILY SSF54593 2 122 2.48E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu5544 534521ffcfa7bbba20246fef51934257 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 116 1.4E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu5544 534521ffcfa7bbba20246fef51934257 124 Gene3D G3DSA:3.10.180.10 1 121 5.6E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu5370 b39e54c1cfe7068c397a36bd219e7e18 286 SUPERFAMILY SSF53098 116 281 1.9E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu5370 b39e54c1cfe7068c397a36bd219e7e18 286 Gene3D G3DSA:3.30.420.10 121 272 6.3E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Atu5370 b39e54c1cfe7068c397a36bd219e7e18 286 Pfam PF13276 HTH-like domain 44 99 2.6E-13 T 14-10-2018 IPR025948 HTH-like domain Atu5370 b39e54c1cfe7068c397a36bd219e7e18 286 Pfam PF00665 Integrase core domain 123 237 2.0E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu3326 4ba03c642de5de82b4dc9aa11752e93f 418 Pfam PF02563 Polysaccharide biosynthesis/export protein 32 118 1.5E-14 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Atu3326 4ba03c642de5de82b4dc9aa11752e93f 418 Gene3D G3DSA:3.10.560.10 118 270 1.3E-5 T 14-10-2018 Atu3326 4ba03c642de5de82b4dc9aa11752e93f 418 Gene3D G3DSA:3.30.1950.10 41 117 1.9E-8 T 14-10-2018 Atu3509 484a98c3ef97e5031b4dd654cdb34b89 142 Pfam PF06676 Protein of unknown function (DUF1178) 2 138 1.2E-51 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 Atu3509 484a98c3ef97e5031b4dd654cdb34b89 142 PIRSF PIRSF032131 1 142 2.4E-69 T 14-10-2018 IPR009562 Protein of unknown function DUF1178 Atu0220 3ac23ed83237c79ef72ab398046228a2 193 TIGRFAM TIGR02522 pilus_cpaD: pilus (Caulobacter type) biogenesis lipoprotein CpaD 2 186 2.2E-60 T 14-10-2018 IPR013361 Pilus biogenesis CpaD Atu0220 3ac23ed83237c79ef72ab398046228a2 193 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 3 184 1.7E-64 T 14-10-2018 IPR019027 Pilus biogenesis CpaD-related Atu4061 8abf0b35d3ba70806cb1fd091a3d9506 92 ProDom PD594998 EXOPOLYSACCHARIDE REPRESSOR PLASMID PRODUCTION TRANSMEMBRANE MEMBRANE NODULATION SYNTHESIS SYRA PSIA 5 57 6.0E-23 T 14-10-2018 IPR024239 Exopolysaccharide production repressor Atu4061 8abf0b35d3ba70806cb1fd091a3d9506 92 Pfam PF11089 Exopolysaccharide production repressor 18 55 1.4E-18 T 14-10-2018 IPR024239 Exopolysaccharide production repressor Atu1511 444aeb93bec4d40b55c9b852d886b864 88 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 73 4.2E-5 T 14-10-2018 IPR022789 Antitoxin ParD Atu1511 444aeb93bec4d40b55c9b852d886b864 88 Gene3D G3DSA:1.10.8.1250 10 88 2.8E-8 T 14-10-2018 IPR038296 Antitoxin ParD superfamily Atu1511 444aeb93bec4d40b55c9b852d886b864 88 SUPERFAMILY SSF47598 1 43 1.67E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu1511 444aeb93bec4d40b55c9b852d886b864 88 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 73 3.1E-14 T 14-10-2018 IPR022789 Antitoxin ParD Atu5000 01d4b587f6fb2234043155bac1eae046 435 Pfam PF13614 AAA domain 151 333 2.9E-38 T 14-10-2018 IPR025669 AAA domain Atu5000 01d4b587f6fb2234043155bac1eae046 435 TIGRFAM TIGR03453 partition_RepA: plasmid partitioning protein RepA 48 434 1.4E-183 T 14-10-2018 IPR017818 Plasmid partitioning protein, RepA Atu5000 01d4b587f6fb2234043155bac1eae046 435 Gene3D G3DSA:3.40.50.300 151 432 6.1E-66 T 14-10-2018 Atu5000 01d4b587f6fb2234043155bac1eae046 435 SUPERFAMILY SSF52540 151 429 1.59E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1930 6c457421fbec8c6407835e9058337928 120 Gene3D G3DSA:3.30.420.100 2 120 7.5E-42 T 14-10-2018 Atu1930 6c457421fbec8c6407835e9058337928 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 120 28.0 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1930 6c457421fbec8c6407835e9058337928 120 SUPERFAMILY SSF53137 4 118 1.5E-49 T 14-10-2018 Atu1930 6c457421fbec8c6407835e9058337928 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 120 4.8E-39 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu1930 6c457421fbec8c6407835e9058337928 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 120 1.7E-42 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu2737 db8420e78265e23c49381ba7137ead68 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 12 165 2.2E-46 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Atu2737 db8420e78265e23c49381ba7137ead68 300 SUPERFAMILY SSF51735 11 169 2.56E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2737 db8420e78265e23c49381ba7137ead68 300 Gene3D G3DSA:3.40.50.720 3 167 1.7E-48 T 14-10-2018 Atu2737 db8420e78265e23c49381ba7137ead68 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 289 2.7E-23 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Atu2737 db8420e78265e23c49381ba7137ead68 300 Gene3D G3DSA:1.10.1040.10 168 297 2.7E-29 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Atu2737 db8420e78265e23c49381ba7137ead68 300 PIRSF PIRSF000103 5 300 6.0E-72 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Atu2737 db8420e78265e23c49381ba7137ead68 300 SUPERFAMILY SSF48179 169 296 2.95E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu5149 393a66edf89d5f738a0525830274e397 180 Pfam PF00583 Acetyltransferase (GNAT) family 60 152 4.6E-5 T 14-10-2018 IPR000182 GNAT domain Atu5149 393a66edf89d5f738a0525830274e397 180 Gene3D G3DSA:3.40.630.30 25 155 9.0E-16 T 14-10-2018 Atu5149 393a66edf89d5f738a0525830274e397 180 SUPERFAMILY SSF55729 25 152 2.61E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3411 d26c5bf5ff6e3231579c2059905f4e49 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 279 5.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3411 d26c5bf5ff6e3231579c2059905f4e49 283 Gene3D G3DSA:1.10.3720.10 72 280 2.8E-12 T 14-10-2018 IPR035906 MetI-like superfamily Atu3411 d26c5bf5ff6e3231579c2059905f4e49 283 SUPERFAMILY SSF161098 77 265 6.7E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu4309 d831b88c0f2d1d83051251984db3ddad 343 Gene3D G3DSA:3.40.50.880 6 209 1.9E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4309 d831b88c0f2d1d83051251984db3ddad 343 SMART SM00342 238 321 4.8E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4309 d831b88c0f2d1d83051251984db3ddad 343 Pfam PF01965 DJ-1/PfpI family 11 179 2.2E-15 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Atu4309 d831b88c0f2d1d83051251984db3ddad 343 Pfam PF12833 Helix-turn-helix domain 244 322 2.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu4309 d831b88c0f2d1d83051251984db3ddad 343 SUPERFAMILY SSF52317 11 201 5.9E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu4309 d831b88c0f2d1d83051251984db3ddad 343 SUPERFAMILY SSF46689 274 324 8.06E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4309 d831b88c0f2d1d83051251984db3ddad 343 Gene3D G3DSA:1.10.10.60 217 327 1.4E-24 T 14-10-2018 Atu1625 b86cd30731ff0084d3feac0782dff7e1 287 SUPERFAMILY SSF53335 15 212 3.34E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1625 b86cd30731ff0084d3feac0782dff7e1 287 Gene3D G3DSA:3.40.50.150 1 255 6.2E-43 T 14-10-2018 Atu1625 b86cd30731ff0084d3feac0782dff7e1 287 Pfam PF08241 Methyltransferase domain 51 148 3.8E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu3656 fc1d5496a6bb7924f3c8d67bd6c30389 128 Gene3D G3DSA:3.40.630.30 11 124 6.7E-21 T 14-10-2018 Atu3656 fc1d5496a6bb7924f3c8d67bd6c30389 128 SUPERFAMILY SSF55729 15 121 1.22E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3656 fc1d5496a6bb7924f3c8d67bd6c30389 128 Pfam PF13673 Acetyltransferase (GNAT) domain 36 121 3.5E-11 T 14-10-2018 IPR000182 GNAT domain Atu2460 1f0e2ad29b923c28d2ebc6afcbdbc4cd 297 Gene3D G3DSA:3.40.50.1980 35 154 1.1E-37 T 14-10-2018 Atu2460 1f0e2ad29b923c28d2ebc6afcbdbc4cd 297 Pfam PF01497 Periplasmic binding protein 39 268 2.6E-35 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Atu2460 1f0e2ad29b923c28d2ebc6afcbdbc4cd 297 Gene3D G3DSA:3.40.50.1980 155 294 9.5E-45 T 14-10-2018 Atu2460 1f0e2ad29b923c28d2ebc6afcbdbc4cd 297 SUPERFAMILY SSF53807 36 293 9.42E-55 T 14-10-2018 Atu3257 6c08d9f62c9ec3ee1b773caeae471406 402 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 402 189.996 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3257 6c08d9f62c9ec3ee1b773caeae471406 402 SUPERFAMILY SSF51658 1 386 5.8E-70 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu3257 6c08d9f62c9ec3ee1b773caeae471406 402 PIRSF PIRSF016049 1 395 1.1E-166 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3257 6c08d9f62c9ec3ee1b773caeae471406 402 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 391 2.0E-123 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu3257 6c08d9f62c9ec3ee1b773caeae471406 402 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 391 6.4E-151 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Atu4352 a056538555c0709d5b54918b1c968526 101 Pfam PF05488 PAAR motif 21 92 1.4E-17 T 14-10-2018 IPR008727 PAAR motif Atu4352 a056538555c0709d5b54918b1c968526 101 Gene3D G3DSA:2.60.200.60 1 58 1.9E-5 T 14-10-2018 Atu4352 a056538555c0709d5b54918b1c968526 101 Gene3D G3DSA:2.60.200.60 59 98 2.7E-6 T 14-10-2018 Atu2795 e22b33dc7966799a314099a66ebe017b 378 Pfam PF01888 CbiD 10 267 4.5E-90 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Atu2795 e22b33dc7966799a314099a66ebe017b 378 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 17 318 1.6E-54 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Atu2795 e22b33dc7966799a314099a66ebe017b 378 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 10 358 29.466 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Atu2795 e22b33dc7966799a314099a66ebe017b 378 PIRSF PIRSF026782 6 365 1.4E-135 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Atu2795 e22b33dc7966799a314099a66ebe017b 378 Gene3D G3DSA:3.30.2110.10 12 182 8.1E-50 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Atu2795 e22b33dc7966799a314099a66ebe017b 378 SUPERFAMILY SSF111342 2 284 1.28E-85 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Atu3114 2e89d0ab4c71e713a53045d5cfd4684d 429 SUPERFAMILY SSF53850 35 421 3.07E-52 T 14-10-2018 Atu3114 2e89d0ab4c71e713a53045d5cfd4684d 429 Gene3D G3DSA:3.40.190.10 144 416 2.6E-122 T 14-10-2018 Atu3114 2e89d0ab4c71e713a53045d5cfd4684d 429 Pfam PF01547 Bacterial extracellular solute-binding protein 47 334 3.9E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3114 2e89d0ab4c71e713a53045d5cfd4684d 429 Gene3D G3DSA:3.40.190.10 35 373 2.6E-122 T 14-10-2018 Atu3639 7074653accfeee4d45227f15bc6f51fb 243 Pfam PF08906 Domain of unknown function (DUF1851) 155 212 5.6E-18 T 14-10-2018 IPR015002 Domain of unknown function DUF1851 Atu3639 7074653accfeee4d45227f15bc6f51fb 243 Pfam PF08887 GAD-like domain 13 114 3.4E-34 T 14-10-2018 IPR014983 GAD-related Atu0920 43d3d63b3277b4cf20d923184bfcdfc2 141 ProDom PD102069 BLL3070 ATU0920 MEMBRANE AGR_C_1676P PRECURSOR TRANSMEMBRANE R01001 MLL7648 SIGNAL 1 87 3.0E-45 T 14-10-2018 IPR035220 Protein of unknown function DUF5330 Atu0920 43d3d63b3277b4cf20d923184bfcdfc2 141 Pfam PF17264 Family of unknown function (DUF5330) 34 95 1.2E-25 T 14-10-2018 IPR035220 Protein of unknown function DUF5330 Atu4285 4cc128e46f320d6520553d4dea491a7e 224 Pfam PF03737 Aldolase/RraA 27 172 2.2E-34 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Atu4285 4cc128e46f320d6520553d4dea491a7e 224 Gene3D G3DSA:3.50.30.40 24 174 4.4E-48 T 14-10-2018 Atu4285 4cc128e46f320d6520553d4dea491a7e 224 SUPERFAMILY SSF89562 21 181 3.4E-43 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Atu3800 760884057e24462c67bec07722eb49cf 345 Gene3D G3DSA:3.40.190.10 32 333 1.5E-47 T 14-10-2018 Atu3800 760884057e24462c67bec07722eb49cf 345 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 322 1.6E-67 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu3800 760884057e24462c67bec07722eb49cf 345 SUPERFAMILY SSF53850 29 338 6.79E-76 T 14-10-2018 Atu3800 760884057e24462c67bec07722eb49cf 345 Gene3D G3DSA:3.40.190.100 117 266 1.5E-47 T 14-10-2018 Atu1844 0d282d6f4afca4cc1da262b3e5fb0e36 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 22.223 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1844 0d282d6f4afca4cc1da262b3e5fb0e36 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 79 5.3E-30 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1844 0d282d6f4afca4cc1da262b3e5fb0e36 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 7.4E-33 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1844 0d282d6f4afca4cc1da262b3e5fb0e36 80 Gene3D G3DSA:3.30.1280.10 1 80 1.0E-31 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu1844 0d282d6f4afca4cc1da262b3e5fb0e36 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 79 5.0E-34 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Atu1844 0d282d6f4afca4cc1da262b3e5fb0e36 80 SUPERFAMILY SSF82697 2 79 1.26E-28 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Atu4252 ee065fe1fc3457772e3b8f5ded25eeee 419 Pfam PF01547 Bacterial extracellular solute-binding protein 40 326 2.4E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4252 ee065fe1fc3457772e3b8f5ded25eeee 419 SUPERFAMILY SSF53850 26 410 3.85E-58 T 14-10-2018 Atu4252 ee065fe1fc3457772e3b8f5ded25eeee 419 Gene3D G3DSA:3.40.190.10 22 414 3.4E-68 T 14-10-2018 Atu3728 5c7f9530a120e51b18227c4e1803d520 167 Gene3D G3DSA:2.30.110.10 9 166 2.9E-39 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Atu3728 5c7f9530a120e51b18227c4e1803d520 167 SUPERFAMILY SSF50475 10 138 2.27E-22 T 14-10-2018 Atu3728 5c7f9530a120e51b18227c4e1803d520 167 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 12 154 1.7E-44 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain Atu5394 8627941fba27b2baad0e25213bf615c1 313 SMART SM01130 2 301 1.9E-59 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5394 8627941fba27b2baad0e25213bf615c1 313 PIRSF PIRSF001365 1 312 8.6E-68 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5394 8627941fba27b2baad0e25213bf615c1 313 Pfam PF00701 Dihydrodipicolinate synthetase family 3 296 1.9E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu5394 8627941fba27b2baad0e25213bf615c1 313 Gene3D G3DSA:3.20.20.70 1 302 5.2E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu5394 8627941fba27b2baad0e25213bf615c1 313 SUPERFAMILY SSF51569 2 301 1.88E-62 T 14-10-2018 Atu0204 d5b63580f756c182f440d8b541774c5c 367 Pfam PF05987 Bacterial protein of unknown function (DUF898) 17 360 7.3E-100 T 14-10-2018 IPR010295 Protein of unknown function DUF898 Atu1320 555694a8e6d9f0cccdb2898efddb1b60 155 Gene3D G3DSA:3.40.630.30 1 154 1.5E-26 T 14-10-2018 Atu1320 555694a8e6d9f0cccdb2898efddb1b60 155 Pfam PF00583 Acetyltransferase (GNAT) family 27 127 1.2E-19 T 14-10-2018 IPR000182 GNAT domain Atu1320 555694a8e6d9f0cccdb2898efddb1b60 155 SUPERFAMILY SSF55729 27 135 1.96E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1440 e790594d62787eb6264ec4be851b1b0a 189 Gene3D G3DSA:3.40.50.300 12 82 4.1E-7 T 14-10-2018 Atu1440 e790594d62787eb6264ec4be851b1b0a 189 SUPERFAMILY SSF52540 18 154 4.72E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4284 92c54d4130cbdab041b12115dcce94de 278 SUPERFAMILY SSF53850 4 255 9.19E-58 T 14-10-2018 Atu4284 92c54d4130cbdab041b12115dcce94de 278 Gene3D G3DSA:3.40.190.10 32 251 3.4E-53 T 14-10-2018 Atu4284 92c54d4130cbdab041b12115dcce94de 278 SMART SM00062 34 255 1.0E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4284 92c54d4130cbdab041b12115dcce94de 278 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site Atu4284 92c54d4130cbdab041b12115dcce94de 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 6.8E-51 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu4284 92c54d4130cbdab041b12115dcce94de 278 Gene3D G3DSA:3.40.190.10 119 217 3.4E-53 T 14-10-2018 Atu1891 8dff187af8ac2c32ec1f8062d61171e0 261 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 257 3.0E-33 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Atu1891 8dff187af8ac2c32ec1f8062d61171e0 261 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 261 43.494 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Atu1891 8dff187af8ac2c32ec1f8062d61171e0 261 Pfam PF02654 Cobalamin-5-phosphate synthase 14 255 1.1E-50 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Atu3421 c2ea803491bce5a760937e1bc1c9fc78 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 326 1.1E-98 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 Atu3421 c2ea803491bce5a760937e1bc1c9fc78 333 Gene3D G3DSA:3.20.20.30 1 329 7.3E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3421 c2ea803491bce5a760937e1bc1c9fc78 333 Pfam PF00296 Luciferase-like monooxygenase 20 298 2.2E-26 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3421 c2ea803491bce5a760937e1bc1c9fc78 333 SUPERFAMILY SSF51679 4 326 9.94E-58 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu0265 c1191de2e98469e1b9d0f3ec9df32b5b 186 SUPERFAMILY SSF52499 4 182 1.06E-36 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu0265 c1191de2e98469e1b9d0f3ec9df32b5b 186 Gene3D G3DSA:3.40.50.850 2 186 4.7E-38 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu0265 c1191de2e98469e1b9d0f3ec9df32b5b 186 Pfam PF00857 Isochorismatase family 6 143 1.7E-26 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu2671 1ecaf0e957ab4124de2280590788cf6a 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 257 2.7E-28 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5348 a6f642e0f63e6825862a52ef8f5cad52 302 Pfam PF07859 alpha/beta hydrolase fold 72 265 2.1E-57 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Atu5348 a6f642e0f63e6825862a52ef8f5cad52 302 Gene3D G3DSA:3.40.50.1820 1 294 1.0E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5348 a6f642e0f63e6825862a52ef8f5cad52 302 SUPERFAMILY SSF53474 36 287 3.44E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 Gene3D G3DSA:1.10.10.10 1 140 2.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 SUPERFAMILY SSF46785 6 136 1.14E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 Pfam PF01047 MarR family 33 91 6.7E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 SMART SM00347 26 126 3.0E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 5.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 5.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 5.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu2532 33ecf56c77fbc35e812a1ea98c348adf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 5.3E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 PRINTS PR00095 Anthranilate synthase component I signature 179 192 3.1E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 PRINTS PR00095 Anthranilate synthase component I signature 273 287 3.1E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 PRINTS PR00095 Anthranilate synthase component I signature 193 206 3.1E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 PRINTS PR00095 Anthranilate synthase component I signature 288 302 3.1E-13 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 Pfam PF00425 chorismate binding enzyme 79 332 1.8E-81 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 Gene3D G3DSA:3.60.120.10 49 339 5.9E-105 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 11 335 8.8E-136 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Atu1676 5b9bfe53df096aa53f5fdf8c458a7405 344 SUPERFAMILY SSF56322 8 335 1.44E-105 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Atu3903 3552f8e65dd93df1a786130b906695ab 265 Gene3D G3DSA:3.40.50.300 2 248 8.2E-61 T 14-10-2018 Atu3903 3552f8e65dd93df1a786130b906695ab 265 SMART SM00382 33 216 1.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu3903 3552f8e65dd93df1a786130b906695ab 265 Pfam PF00005 ABC transporter 24 166 2.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3903 3552f8e65dd93df1a786130b906695ab 265 SUPERFAMILY SSF52540 5 232 2.48E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3903 3552f8e65dd93df1a786130b906695ab 265 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 2.3E-103 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 Atu3903 3552f8e65dd93df1a786130b906695ab 265 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0270 897022fa0edf49f779b101236b052103 400 SUPERFAMILY SSF54826 1 112 2.41E-26 T 14-10-2018 Atu0270 897022fa0edf49f779b101236b052103 400 Pfam PF13378 Enolase C-terminal domain-like 158 383 8.7E-53 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Atu0270 897022fa0edf49f779b101236b052103 400 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 108 4.7E-16 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Atu0270 897022fa0edf49f779b101236b052103 400 SUPERFAMILY SSF51604 96 390 2.49E-67 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Atu0270 897022fa0edf49f779b101236b052103 400 SMART SM00922 153 263 4.1E-9 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Atu4223 1d03ee52592fe3f54baafb6eecee62d2 91 Pfam PF04267 Sarcosine oxidase, delta subunit family 5 80 5.2E-32 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4223 1d03ee52592fe3f54baafb6eecee62d2 91 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 4 84 5.2E-36 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu4223 1d03ee52592fe3f54baafb6eecee62d2 91 Gene3D G3DSA:3.30.2270.10 2 91 4.3E-32 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 Atu3172 f5f86adf9d14465b8a779f74bf97934b 276 SUPERFAMILY SSF161098 4 276 2.24E-74 T 14-10-2018 IPR035906 MetI-like superfamily Atu3172 f5f86adf9d14465b8a779f74bf97934b 276 Gene3D G3DSA:1.10.3720.10 1 267 1.3E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu3172 f5f86adf9d14465b8a779f74bf97934b 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 270 1.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 Gene3D G3DSA:1.20.120.530 92 239 1.2E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 SUPERFAMILY SSF46785 13 81 3.98E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 SUPERFAMILY SSF48008 104 237 3.14E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 2.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 SMART SM00895 106 230 1.6E-16 T 14-10-2018 IPR011711 GntR, C-terminal Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.2E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.2E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 Gene3D G3DSA:1.10.10.10 12 79 2.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 Pfam PF07729 FCD domain 107 229 9.9E-20 T 14-10-2018 IPR011711 GntR, C-terminal Atu1788 d94738a8b8a73317754a4c1c1faf2e7e 245 SMART SM00345 18 77 1.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu6152 4e9f3cfa40b148beb305be5b0fd392e2 307 Pfam PF01548 Transposase 7 154 8.8E-18 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Atu6152 4e9f3cfa40b148beb305be5b0fd392e2 307 Pfam PF02371 Transposase IS116/IS110/IS902 family 225 295 1.9E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Atu2397 7122d0ac7154ff814505da6657e7ae6e 210 Gene3D G3DSA:1.10.4190.10 1 206 1.4E-40 T 14-10-2018 IPR038277 UreF domain superfamily Atu2397 7122d0ac7154ff814505da6657e7ae6e 210 Hamap MF_01385 Urease accessory protein UreF [ureF]. 1 210 24.449 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Atu2397 7122d0ac7154ff814505da6657e7ae6e 210 Pfam PF01730 UreF 28 166 2.2E-25 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Atu2397 7122d0ac7154ff814505da6657e7ae6e 210 PIRSF PIRSF009467 1 210 1.1E-58 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Atu4476 f7324c66fad4f1a76c26db969c03c259 253 Pfam PF03741 Integral membrane protein TerC family 18 209 7.9E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Atu1166 2e74e1a6508f6f4e7bc10bb93c70cd48 159 Pfam PF03477 ATP cone domain 50 135 2.5E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Atu1166 2e74e1a6508f6f4e7bc10bb93c70cd48 159 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 2.7E-47 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Atu1166 2e74e1a6508f6f4e7bc10bb93c70cd48 159 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 84.9 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 SUPERFAMILY SSF47413 3 64 4.9E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 Gene3D G3DSA:1.10.260.40 1 65 6.1E-18 T 14-10-2018 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 Gene3D G3DSA:3.40.50.2300 175 334 5.8E-35 T 14-10-2018 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 Pfam PF13377 Periplasmic binding protein-like domain 189 338 3.5E-17 T 14-10-2018 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 Gene3D G3DSA:3.40.50.2300 93 331 5.8E-35 T 14-10-2018 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.5E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 SUPERFAMILY SSF53822 84 342 6.6E-24 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4254 97e91cebb71978ae539c4d36d5ca7a9f 352 SMART SM00354 4 77 1.7E-8 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Atu1416 4d29206be00b6d3596615c42359e8f8e 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 14-10-2018 IPR020845 AMP-binding, conserved site Atu1416 4d29206be00b6d3596615c42359e8f8e 611 SUPERFAMILY SSF56801 22 531 3.01E-74 T 14-10-2018 Atu1416 4d29206be00b6d3596615c42359e8f8e 611 Pfam PF00501 AMP-binding enzyme 42 466 2.6E-48 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Atu1416 4d29206be00b6d3596615c42359e8f8e 611 Gene3D G3DSA:3.40.50.12780 31 447 1.4E-58 T 14-10-2018 Atu1071 9e9191263ad9723b75ae894a03aee527 157 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 106 1.2E-19 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Atu1071 9e9191263ad9723b75ae894a03aee527 157 Gene3D G3DSA:2.170.150.70 5 109 2.0E-14 T 14-10-2018 Atu1071 9e9191263ad9723b75ae894a03aee527 157 SUPERFAMILY SSF51316 1 126 3.03E-42 T 14-10-2018 IPR011057 Mss4-like superfamily Atu4892 be0e0113ac08f5f83458757934e1fd13 697 Gene3D G3DSA:3.40.50.150 1 288 1.3E-27 T 14-10-2018 Atu4892 be0e0113ac08f5f83458757934e1fd13 697 SUPERFAMILY SSF53335 18 301 2.14E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4892 be0e0113ac08f5f83458757934e1fd13 697 Pfam PF02384 N-6 DNA Methylase 19 259 4.1E-6 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Atu4892 be0e0113ac08f5f83458757934e1fd13 697 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 142 148 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu4892 be0e0113ac08f5f83458757934e1fd13 697 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 20 34 1.7E-6 T 14-10-2018 Atu4892 be0e0113ac08f5f83458757934e1fd13 697 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 139 151 1.7E-6 T 14-10-2018 Atu1862 0ae488f7fad35b246c590c4905d0f239 514 Gene3D G3DSA:3.40.50.300 34 253 1.3E-35 T 14-10-2018 Atu1862 0ae488f7fad35b246c590c4905d0f239 514 Pfam PF01935 Domain of unknown function DUF87 15 84 8.4E-10 T 14-10-2018 IPR002789 Helicase HerA, central domain Atu1862 0ae488f7fad35b246c590c4905d0f239 514 SUPERFAMILY SSF52540 13 254 3.75E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1862 0ae488f7fad35b246c590c4905d0f239 514 PIRSF PIRSF034081 10 514 1.0E-293 T 14-10-2018 IPR014588 ATPase, Atu1862 type, predicted Atu1862 0ae488f7fad35b246c590c4905d0f239 514 SMART SM00382 33 293 7.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu1370 0c9c5690e6e2474317167ad5737d641e 399 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 13 389 9.0E-158 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition Atu1370 0c9c5690e6e2474317167ad5737d641e 399 SUPERFAMILY SSF55729 190 365 1.01E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2318 b8dd2b5e8ca25a0836c724cdf7456057 382 PIRSF PIRSF000138 2 382 5.6E-132 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Atu2318 b8dd2b5e8ca25a0836c724cdf7456057 382 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 279 285 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Atu2318 b8dd2b5e8ca25a0836c724cdf7456057 382 SUPERFAMILY SSF51395 9 380 3.36E-106 T 14-10-2018 Atu2318 b8dd2b5e8ca25a0836c724cdf7456057 382 Pfam PF01070 FMN-dependent dehydrogenase 19 381 1.6E-137 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Atu2318 b8dd2b5e8ca25a0836c724cdf7456057 382 Gene3D G3DSA:3.20.20.70 8 382 4.9E-137 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 350 373 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 9 468 33.885 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 SUPERFAMILY SSF51905 4 375 6.94E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 8 429 1.5E-162 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 Pfam PF01134 Glucose inhibited division protein A 9 380 6.7E-108 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 Gene3D G3DSA:3.50.50.60 267 479 8.7E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1669 a75eaba6edbaa8cebf09e9a1b4d5e2e2 481 Gene3D G3DSA:3.50.50.60 7 184 3.0E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3881 bffd309c70b30af463c3c814c480bd32 337 SUPERFAMILY SSF53822 38 311 1.0E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu3881 bffd309c70b30af463c3c814c480bd32 337 Pfam PF13407 Periplasmic binding protein domain 46 283 2.3E-48 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3881 bffd309c70b30af463c3c814c480bd32 337 Gene3D G3DSA:3.40.50.2300 141 325 2.4E-63 T 14-10-2018 Atu3881 bffd309c70b30af463c3c814c480bd32 337 Gene3D G3DSA:3.40.50.2300 49 317 2.4E-63 T 14-10-2018 Atu3017 a8ff7e2984df53d5775566bd2a4905cf 97 Gene3D G3DSA:3.40.50.1240 1 96 4.5E-11 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu3017 a8ff7e2984df53d5775566bd2a4905cf 97 PIRSF PIRSF000709 1 94 2.9E-7 T 14-10-2018 Atu3017 a8ff7e2984df53d5775566bd2a4905cf 97 SUPERFAMILY SSF53254 2 88 2.36E-11 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Atu3017 a8ff7e2984df53d5775566bd2a4905cf 97 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 87 1.2E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Atu0959 41e2a18fe148f1b99ec983d0149613ec 131 Pfam PF11367 Protein of unknown function (DUF3168) 10 126 5.3E-27 T 14-10-2018 IPR021508 Tail completion protein Atu0959 41e2a18fe148f1b99ec983d0149613ec 131 Gene3D G3DSA:3.30.2000.30 1 130 2.7E-21 T 14-10-2018 Atu2457 ef884512f90ee701d0e38bfc08c28411 118 PIRSF PIRSF016789 1 118 8.4E-47 T 14-10-2018 IPR007401 Protein of unknown function DUF454 Atu2457 ef884512f90ee701d0e38bfc08c28411 118 Pfam PF04304 Protein of unknown function (DUF454) 2 117 2.4E-40 T 14-10-2018 IPR007401 Protein of unknown function DUF454 Atu5133 c39bb54aa92bc2e2cff1adb406421922 382 Pfam PF12704 MacB-like periplasmic core domain 29 178 9.5E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Atu5133 c39bb54aa92bc2e2cff1adb406421922 382 Pfam PF02687 FtsX-like permease family 284 371 6.9E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu0210 df02a5d64f006cf6672d9867b48e8185 114 SMART SM00347 22 114 0.0052 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu0210 df02a5d64f006cf6672d9867b48e8185 114 SUPERFAMILY SSF46785 25 109 7.81E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0210 df02a5d64f006cf6672d9867b48e8185 114 Gene3D G3DSA:1.10.10.10 6 114 5.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0210 df02a5d64f006cf6672d9867b48e8185 114 Pfam PF12802 MarR family 28 86 1.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu6181 eb4011a560bda3e95f6629d47d8e7ec0 147 ProDom PD021660 PLASMID ENDONUCLEASE VIRD1 3.1.-.- BORDER HYDROLASE GALL CROWN T-DNA NUCLEASE 1 147 4.0E-71 T 14-10-2018 IPR009933 T-DNA border endonuclease VirD1 GO:0004519 Atu6181 eb4011a560bda3e95f6629d47d8e7ec0 147 Pfam PF07328 T-DNA border endonuclease VirD1 5 146 1.7E-88 T 14-10-2018 IPR009933 T-DNA border endonuclease VirD1 GO:0004519 Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 Gene3D G3DSA:3.40.1410.10 101 234 5.9E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 Gene3D G3DSA:1.10.10.10 10 91 9.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 SUPERFAMILY SSF64288 68 244 1.02E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 5.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 16 245 3.4E-86 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 SMART SM00345 21 80 3.2E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 Pfam PF07702 UTRA domain 102 237 1.2E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 SMART SM00866 101 238 2.9E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Atu3936 cf79ec0668875960b2e58b879d0cff5c 248 SUPERFAMILY SSF46785 11 84 1.82E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3404 06f1e81ec32ae2f2b9d18403737e9077 424 Gene3D G3DSA:3.50.50.60 27 383 1.2E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3404 06f1e81ec32ae2f2b9d18403737e9077 424 SUPERFAMILY SSF51905 25 409 1.68E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3404 06f1e81ec32ae2f2b9d18403737e9077 424 Gene3D G3DSA:3.30.9.10 120 345 1.2E-80 T 14-10-2018 Atu3404 06f1e81ec32ae2f2b9d18403737e9077 424 Pfam PF01266 FAD dependent oxidoreductase 27 381 7.8E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu5138 f9d6626ae552a52c3b0c6f8620bdb768 386 Gene3D G3DSA:1.20.1090.10 189 386 2.1E-64 T 14-10-2018 Atu5138 f9d6626ae552a52c3b0c6f8620bdb768 386 SUPERFAMILY SSF56796 3 385 2.22E-116 T 14-10-2018 Atu5138 f9d6626ae552a52c3b0c6f8620bdb768 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 20 377 1.1E-110 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Atu5138 f9d6626ae552a52c3b0c6f8620bdb768 386 Gene3D G3DSA:3.40.50.1970 1 186 7.9E-50 T 14-10-2018 Atu5138 f9d6626ae552a52c3b0c6f8620bdb768 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 175 203 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Atu0162 4c8d48d27ce7f7daa8e89f06da046ea4 167 Gene3D G3DSA:3.30.420.270 64 133 1.7E-25 T 14-10-2018 Atu0162 4c8d48d27ce7f7daa8e89f06da046ea4 167 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 16 137 3.3E-64 T 14-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 Atu0162 4c8d48d27ce7f7daa8e89f06da046ea4 167 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 134 1.8E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Atu0658 98a0fac09cacaa09fe965b4ad794cd77 501 Pfam PF01384 Phosphate transporter family 78 489 2.1E-101 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Atu3160 251d69f0a0c42c4ca07d230b0a962ffa 100 SUPERFAMILY SSF54909 6 93 2.18E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu3160 251d69f0a0c42c4ca07d230b0a962ffa 100 Gene3D G3DSA:3.30.70.100 1 98 3.6E-25 T 14-10-2018 Atu3160 251d69f0a0c42c4ca07d230b0a962ffa 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 80 1.2E-22 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu6096 b824534e13a8c65bec6a73cbd694d3e6 359 Pfam PF13155 Toprim-like 254 345 3.6E-18 T 14-10-2018 Atu6096 b824534e13a8c65bec6a73cbd694d3e6 359 PIRSF PIRSF036054 46 355 1.4E-169 T 14-10-2018 IPR017041 Uncharacterised conserved protein UCP036054 Atu6096 b824534e13a8c65bec6a73cbd694d3e6 359 Pfam PF13154 Protein of unknown function (DUF3991) 180 247 1.1E-19 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 Atu6096 b824534e13a8c65bec6a73cbd694d3e6 359 SUPERFAMILY SSF57783 55 145 6.8E-5 T 14-10-2018 Atu1490 0fdd39622383c552de2dd443c2b4f84e 140 SUPERFAMILY SSF52833 2 136 8.83E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu1490 0fdd39622383c552de2dd443c2b4f84e 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 3.3E-43 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 Atu1490 0fdd39622383c552de2dd443c2b4f84e 140 Pfam PF03960 ArsC family 6 113 2.5E-14 T 14-10-2018 IPR006660 Arsenate reductase-like Atu1490 0fdd39622383c552de2dd443c2b4f84e 140 Gene3D G3DSA:3.40.30.10 1 140 5.0E-55 T 14-10-2018 Atu4092 23846d998bb72b8af4047f91eb7efb60 385 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 12 367 1.9E-107 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atu4092 23846d998bb72b8af4047f91eb7efb60 385 PIRSF PIRSF000267 7 384 9.3E-124 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atu4092 23846d998bb72b8af4047f91eb7efb60 385 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 382 1.2E-137 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Atu4168 a920872869946148ab0c05e23f5fddea 148 Pfam PF05957 Bacterial protein of unknown function (DUF883) 57 148 9.2E-16 T 14-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 Atu0481 4d2f476cf8d4b45a6388dbee3a1e7629 431 Pfam PF04932 O-Antigen ligase 211 356 3.1E-13 T 14-10-2018 IPR007016 O-antigen ligase-related Atu2032 a1434cc9479797931d498894e639a41b 281 SUPERFAMILY SSF51430 8 272 1.44E-83 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu2032 a1434cc9479797931d498894e639a41b 281 Gene3D G3DSA:3.20.20.100 1 281 3.4E-105 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu2032 a1434cc9479797931d498894e639a41b 281 PIRSF PIRSF000097 117 269 1.7E-21 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu2032 a1434cc9479797931d498894e639a41b 281 PIRSF PIRSF000097 1 119 1.7E-21 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu2032 a1434cc9479797931d498894e639a41b 281 PRINTS PR00069 Aldo-keto reductase signature 129 146 5.4E-16 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu2032 a1434cc9479797931d498894e639a41b 281 PRINTS PR00069 Aldo-keto reductase signature 99 117 5.4E-16 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu2032 a1434cc9479797931d498894e639a41b 281 PRINTS PR00069 Aldo-keto reductase signature 43 67 5.4E-16 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu2032 a1434cc9479797931d498894e639a41b 281 PRINTS PR00069 Aldo-keto reductase signature 203 227 5.4E-16 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Atu2032 a1434cc9479797931d498894e639a41b 281 Pfam PF00248 Aldo/keto reductase family 19 267 5.6E-56 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu2032 a1434cc9479797931d498894e639a41b 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 237 252 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Atu5275 aede2c8c19bd368b1986677c91f89036 314 Gene3D G3DSA:3.40.50.1820 8 302 1.1E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu5275 aede2c8c19bd368b1986677c91f89036 314 SUPERFAMILY SSF53474 25 281 1.12E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu6033 fbacbd7935b15ad16678321e1d718db9 284 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 65 269 5.8E-94 T 14-10-2018 IPR014142 P-type conjugative transfer protein TrbG Atu6033 fbacbd7935b15ad16678321e1d718db9 284 Gene3D G3DSA:2.60.40.2500 190 282 1.0E-9 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Atu6033 fbacbd7935b15ad16678321e1d718db9 284 Pfam PF03524 Conjugal transfer protein 72 281 3.1E-55 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atu4872 5b2ceb769656097481d31d6f391bce54 299 SUPERFAMILY SSF53850 92 296 3.98E-40 T 14-10-2018 Atu4872 5b2ceb769656097481d31d6f391bce54 299 Gene3D G3DSA:3.40.190.10 94 293 1.0E-48 T 14-10-2018 Atu4872 5b2ceb769656097481d31d6f391bce54 299 Gene3D G3DSA:1.10.10.10 5 92 2.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu4872 5b2ceb769656097481d31d6f391bce54 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4872 5b2ceb769656097481d31d6f391bce54 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4872 5b2ceb769656097481d31d6f391bce54 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4872 5b2ceb769656097481d31d6f391bce54 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.5E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu4872 5b2ceb769656097481d31d6f391bce54 299 Pfam PF03466 LysR substrate binding domain 90 295 1.5E-36 T 14-10-2018 IPR005119 LysR, substrate-binding Atu4872 5b2ceb769656097481d31d6f391bce54 299 Gene3D G3DSA:3.40.190.10 166 269 1.0E-48 T 14-10-2018 Atu4872 5b2ceb769656097481d31d6f391bce54 299 SUPERFAMILY SSF46785 6 80 2.01E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 ProSitePatterns PS00018 EF-hand calcium-binding domain. 54 66 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 Pfam PF13202 EF hand 47 66 2.1E-6 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 Pfam PF13202 EF hand 72 92 2.7E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 Pfam PF13202 EF hand 174 190 0.0018 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 SUPERFAMILY SSF47473 48 191 1.24E-15 T 14-10-2018 IPR011992 EF-hand domain pair Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 ProSitePatterns PS00018 EF-hand calcium-binding domain. 180 192 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 Gene3D G3DSA:1.10.238.10 150 195 1.3E-8 T 14-10-2018 Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 Gene3D G3DSA:1.10.238.10 42 104 7.5E-12 T 14-10-2018 Atu0377 8d2a1d6492e8d367e0352fc764c2d8a9 198 ProSitePatterns PS00018 EF-hand calcium-binding domain. 78 90 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site Atu4788 0d11439cc3b5fc5049a9854ad1ce33e3 359 Gene3D G3DSA:3.40.50.150 3 184 4.7E-25 T 14-10-2018 Atu4788 0d11439cc3b5fc5049a9854ad1ce33e3 359 Pfam PF13649 Methyltransferase domain 47 140 3.6E-15 T 14-10-2018 Atu4788 0d11439cc3b5fc5049a9854ad1ce33e3 359 SUPERFAMILY SSF53335 4 147 1.67E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4059 e0e497ff6824c12577e92797364a7e34 322 Pfam PF04230 Polysaccharide pyruvyl transferase 142 189 7.9E-9 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase Atu6071 9cc015bdeb723910103f93ed8270b26a 276 Pfam PF00753 Metallo-beta-lactamase superfamily 41 202 2.8E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu6071 9cc015bdeb723910103f93ed8270b26a 276 SUPERFAMILY SSF56281 34 265 1.57E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu6071 9cc015bdeb723910103f93ed8270b26a 276 SMART SM00849 42 259 3.0E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu6071 9cc015bdeb723910103f93ed8270b26a 276 Gene3D G3DSA:3.60.15.10 1 276 1.5E-106 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2328 f7135e3d121aa2d669d2986cb9fec5ec 307 Gene3D G3DSA:3.20.20.370 1 306 2.7E-97 T 14-10-2018 Atu2328 f7135e3d121aa2d669d2986cb9fec5ec 307 SUPERFAMILY SSF88713 5 303 1.97E-86 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu2328 f7135e3d121aa2d669d2986cb9fec5ec 307 Pfam PF01522 Polysaccharide deacetylase 78 164 1.8E-9 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atu2328 f7135e3d121aa2d669d2986cb9fec5ec 307 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 303 2.0E-159 T 14-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 Atu2294 6fa7e97a18fd56686087afc063b1563e 155 Pfam PF00583 Acetyltransferase (GNAT) family 24 134 1.2E-12 T 14-10-2018 IPR000182 GNAT domain Atu2294 6fa7e97a18fd56686087afc063b1563e 155 Gene3D G3DSA:3.40.630.30 9 148 3.1E-31 T 14-10-2018 Atu2294 6fa7e97a18fd56686087afc063b1563e 155 SUPERFAMILY SSF55729 15 144 9.12E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2294 6fa7e97a18fd56686087afc063b1563e 155 PIRSF PIRSF000452 5 148 3.4E-42 T 14-10-2018 IPR024170 Aminoglycoside N6-acetyltransferase Atu0461 7508f42f0b7e8f863c5bd9bcc8138d12 386 SUPERFAMILY SSF69279 6 177 7.23E-18 T 14-10-2018 Atu0461 7508f42f0b7e8f863c5bd9bcc8138d12 386 Pfam PF05954 Phage late control gene D protein (GPD) 87 295 1.1E-15 T 14-10-2018 Atu2461 2d5e8c535cf1876212b46a206f4852f1 115 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 1.6E-19 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Atu2461 2d5e8c535cf1876212b46a206f4852f1 115 Gene3D G3DSA:3.30.70.100 1 108 4.0E-30 T 14-10-2018 Atu2461 2d5e8c535cf1876212b46a206f4852f1 115 SUPERFAMILY SSF54909 1 103 1.61E-31 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1068 f0f87d77d6a06ef134e9bab072e860a5 302 TIGRFAM TIGR00688 rarD: protein RarD 18 269 2.3E-53 T 14-10-2018 IPR004626 RarD protein GO:0005887 Atu1068 f0f87d77d6a06ef134e9bab072e860a5 302 SUPERFAMILY SSF103481 198 296 8.76E-8 T 14-10-2018 Atu1068 f0f87d77d6a06ef134e9bab072e860a5 302 Pfam PF00892 EamA-like transporter family 18 153 3.7E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1068 f0f87d77d6a06ef134e9bab072e860a5 302 SUPERFAMILY SSF103481 56 156 2.88E-7 T 14-10-2018 Atu1253 3bb35418cbc9ae6e1a4dccbb5a01411c 113 Gene3D G3DSA:2.60.120.10 2 111 6.7E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1253 3bb35418cbc9ae6e1a4dccbb5a01411c 113 SUPERFAMILY SSF51182 14 111 1.91E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu1253 3bb35418cbc9ae6e1a4dccbb5a01411c 113 Pfam PF05899 Protein of unknown function (DUF861) 37 109 5.2E-26 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Atu2736 d2efa602542c74803545d567892ab950 594 SUPERFAMILY SSF52016 384 577 5.02E-46 T 14-10-2018 Atu2736 d2efa602542c74803545d567892ab950 594 SUPERFAMILY SSF143975 10 381 3.01E-115 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu2736 d2efa602542c74803545d567892ab950 594 Gene3D G3DSA:3.50.30.80 384 549 1.8E-32 T 14-10-2018 Atu2736 d2efa602542c74803545d567892ab950 594 Pfam PF00920 Dehydratase family 47 574 8.3E-154 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Atu8137 ec85fbee62c2f7905a196e6f492f523c 175 Pfam PF05258 Protein of unknown function (DUF721) 17 116 9.9E-19 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Atu8137 ec85fbee62c2f7905a196e6f492f523c 175 PIRSF PIRSF032064 1 171 2.6E-79 T 14-10-2018 IPR010593 Protein of unknown function DUF1159 Atu4316 b467c25305aa2b53a3d74c211c3d7841 409 SUPERFAMILY SSF103473 17 390 2.09E-30 T 14-10-2018 IPR036259 MFS transporter superfamily Atu4316 b467c25305aa2b53a3d74c211c3d7841 409 Pfam PF07690 Major Facilitator Superfamily 218 382 3.0E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu4316 b467c25305aa2b53a3d74c211c3d7841 409 Gene3D G3DSA:1.20.1250.20 16 385 4.9E-27 T 14-10-2018 Atu3742 fa2c65f44878526603a72853ca5a8731 171 Gene3D G3DSA:1.10.8.930 14 145 2.1E-47 T 14-10-2018 IPR038301 AraC-like superfamily Atu3742 fa2c65f44878526603a72853ca5a8731 171 Pfam PF07323 Protein of unknown function (DUF1465) 14 168 2.8E-62 T 14-10-2018 IPR010848 Protein of unknown function DUF1465 Atu5372 60c663799ec036f07a11e41131d80909 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 215 376 2.0E-40 T 14-10-2018 IPR000160 GGDEF domain Atu5372 60c663799ec036f07a11e41131d80909 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 217 372 2.6E-39 T 14-10-2018 IPR000160 GGDEF domain Atu5372 60c663799ec036f07a11e41131d80909 411 Gene3D G3DSA:3.30.70.270 205 375 1.5E-47 T 14-10-2018 Atu5372 60c663799ec036f07a11e41131d80909 411 SMART SM00267 206 376 2.7E-48 T 14-10-2018 IPR000160 GGDEF domain Atu5372 60c663799ec036f07a11e41131d80909 411 SUPERFAMILY SSF55073 222 374 8.63E-40 T 14-10-2018 IPR029787 Nucleotide cyclase Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 Gene3D G3DSA:3.40.309.10 259 492 6.7E-83 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 Pfam PF00171 Aldehyde dehydrogenase family 21 482 5.5E-171 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 Gene3D G3DSA:3.40.605.10 1 258 5.8E-107 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 10 493 60.979 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 SUPERFAMILY SSF53720 10 488 7.72E-167 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu0829 c2e4298500ab0d057ff12dd7953dd188 493 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 16 480 2.9E-232 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Atu3205 3bb0f2858a431161cc0ac70b0bf5dfca 264 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 2 263 1.2E-115 T 14-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Atu3205 3bb0f2858a431161cc0ac70b0bf5dfca 264 Pfam PF05899 Protein of unknown function (DUF861) 54 136 4.8E-16 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Atu3205 3bb0f2858a431161cc0ac70b0bf5dfca 264 Gene3D G3DSA:2.60.120.10 19 259 2.1E-102 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3205 3bb0f2858a431161cc0ac70b0bf5dfca 264 Pfam PF07883 Cupin domain 186 248 2.8E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu3205 3bb0f2858a431161cc0ac70b0bf5dfca 264 SUPERFAMILY SSF51182 12 263 1.05E-77 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3205 3bb0f2858a431161cc0ac70b0bf5dfca 264 Gene3D G3DSA:2.60.120.10 31 156 2.1E-102 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu1237 ac5ea6788bd0dbd64c0f9c20f483b692 393 Gene3D G3DSA:3.40.50.2000 203 374 3.3E-53 T 14-10-2018 Atu1237 ac5ea6788bd0dbd64c0f9c20f483b692 393 Pfam PF13579 Glycosyl transferase 4-like domain 32 202 4.2E-19 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu1237 ac5ea6788bd0dbd64c0f9c20f483b692 393 SUPERFAMILY SSF53756 24 391 5.76E-63 T 14-10-2018 Atu1237 ac5ea6788bd0dbd64c0f9c20f483b692 393 Pfam PF00534 Glycosyl transferases group 1 204 350 9.5E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu1237 ac5ea6788bd0dbd64c0f9c20f483b692 393 Gene3D G3DSA:3.40.50.2000 31 383 3.3E-53 T 14-10-2018 Atu1057 2074635c51bd304701f6937916e7882a 138 PRINTS PR00502 NUDIX hydrolase family signature 35 49 8.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu1057 2074635c51bd304701f6937916e7882a 138 PRINTS PR00502 NUDIX hydrolase family signature 49 64 8.5E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu1057 2074635c51bd304701f6937916e7882a 138 Pfam PF00293 NUDIX domain 7 123 1.2E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu1057 2074635c51bd304701f6937916e7882a 138 Gene3D G3DSA:3.90.79.10 6 136 3.8E-29 T 14-10-2018 Atu1057 2074635c51bd304701f6937916e7882a 138 SUPERFAMILY SSF55811 4 137 4.87E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu1057 2074635c51bd304701f6937916e7882a 138 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 140 162 6.7E-33 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 163 183 6.7E-33 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 22 39 6.7E-33 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 220 6.7E-33 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 97 118 6.7E-33 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 245 263 6.7E-33 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 21 262 1.1E-74 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 Gene3D G3DSA:2.120.10.30 8 292 3.7E-79 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu4190 29cb378ae1175e54fd3f724dc8ac900f 293 SUPERFAMILY SSF63829 7 291 4.25E-61 T 14-10-2018 Atu6185 a81b7b35e1b6116c7f8d993172c24618 840 SMART SM00795 62 840 0.0 T 14-10-2018 IPR006819 Agrobacterium VirD5 protein Atu6185 a81b7b35e1b6116c7f8d993172c24618 840 PIRSF PIRSF035823 1 840 0.0 T 14-10-2018 IPR006819 Agrobacterium VirD5 protein Atu6185 a81b7b35e1b6116c7f8d993172c24618 840 Pfam PF04730 Agrobacterium VirD5 protein 55 165 1.9E-33 T 14-10-2018 IPR006819 Agrobacterium VirD5 protein Atu6185 a81b7b35e1b6116c7f8d993172c24618 840 Pfam PF04730 Agrobacterium VirD5 protein 167 836 3.9E-271 T 14-10-2018 IPR006819 Agrobacterium VirD5 protein Atu4686 fb51a764f511a359b78d6dac8f73c310 106 SUPERFAMILY SSF54909 1 105 5.04E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu4686 fb51a764f511a359b78d6dac8f73c310 106 Gene3D G3DSA:3.30.70.100 10 104 1.3E-6 T 14-10-2018 Atu0309 c4b760e82b7bf27b1ae000266f15e021 170 SUPERFAMILY SSF51182 39 145 2.02E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu0309 c4b760e82b7bf27b1ae000266f15e021 170 Gene3D G3DSA:2.60.120.10 43 143 5.3E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu0309 c4b760e82b7bf27b1ae000266f15e021 170 Pfam PF05899 Protein of unknown function (DUF861) 70 139 3.2E-24 T 14-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Atu0443 f32a010411a3b424177d0873ac567663 231 SMART SM00530 13 68 9.1E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0443 f32a010411a3b424177d0873ac567663 231 SUPERFAMILY SSF51306 121 210 2.09E-8 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Atu0443 f32a010411a3b424177d0873ac567663 231 Gene3D G3DSA:1.10.260.40 1 83 1.0E-12 T 14-10-2018 Atu0443 f32a010411a3b424177d0873ac567663 231 SUPERFAMILY SSF47413 3 68 1.51E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu0443 f32a010411a3b424177d0873ac567663 231 Pfam PF01381 Helix-turn-helix 14 66 9.8E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu0443 f32a010411a3b424177d0873ac567663 231 Pfam PF00717 Peptidase S24-like 141 211 5.8E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Atu4579 e4b13c163b41f66a6d725c3706786915 561 SUPERFAMILY SSF161098 303 555 5.98E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu4579 e4b13c163b41f66a6d725c3706786915 561 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 286 4.2E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4579 e4b13c163b41f66a6d725c3706786915 561 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 373 550 1.3E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4579 e4b13c163b41f66a6d725c3706786915 561 Gene3D G3DSA:1.10.3720.10 310 558 2.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu4579 e4b13c163b41f66a6d725c3706786915 561 Gene3D G3DSA:1.10.3720.10 20 291 4.5E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu4579 e4b13c163b41f66a6d725c3706786915 561 SUPERFAMILY SSF161098 23 289 1.03E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu3958 7a285fbfc05e48de21d5deed2032c9d4 448 SUPERFAMILY SSF51905 37 425 2.96E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3958 7a285fbfc05e48de21d5deed2032c9d4 448 Gene3D G3DSA:3.30.9.10 134 364 7.5E-46 T 14-10-2018 Atu3958 7a285fbfc05e48de21d5deed2032c9d4 448 Pfam PF01266 FAD dependent oxidoreductase 38 402 4.3E-35 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3958 7a285fbfc05e48de21d5deed2032c9d4 448 Gene3D G3DSA:3.50.50.60 38 403 7.5E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1435 56bfc696e27fbf8f882e5b4447b0e0e9 82 Pfam PF04226 Transglycosylase associated protein 34 82 7.1E-12 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Atu2075 7c069a114971885f170c2578a789c9b8 155 SMART SM00260 12 146 1.1E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atu2075 7c069a114971885f170c2578a789c9b8 155 Gene3D G3DSA:2.30.30.40 15 140 9.3E-39 T 14-10-2018 Atu2075 7c069a114971885f170c2578a789c9b8 155 Pfam PF01584 CheW-like domain 14 148 5.4E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Atu2075 7c069a114971885f170c2578a789c9b8 155 SUPERFAMILY SSF50341 7 149 2.49E-38 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Atu2075 7c069a114971885f170c2578a789c9b8 155 Gene3D G3DSA:2.40.50.180 32 141 9.3E-39 T 14-10-2018 Atu3224 9f4c29e9f8b174aad91026fdf90e18fb 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 312 3.7E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1600 662b4e7d0b53632b1b15895d1041f8b3 94 SUPERFAMILY SSF47336 3 63 6.41E-16 T 14-10-2018 IPR036736 ACP-like superfamily Atu1600 662b4e7d0b53632b1b15895d1041f8b3 94 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Atu1600 662b4e7d0b53632b1b15895d1041f8b3 94 Pfam PF00550 Phosphopantetheine attachment site 8 61 9.1E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Atu1600 662b4e7d0b53632b1b15895d1041f8b3 94 Gene3D G3DSA:1.10.1200.10 3 94 2.7E-30 T 14-10-2018 IPR036736 ACP-like superfamily Atu8140 3e921b6e7b991bf302342d3ac8522b93 217 Gene3D G3DSA:3.30.20.10 94 140 5.5E-10 T 14-10-2018 Atu8140 3e921b6e7b991bf302342d3ac8522b93 217 SUPERFAMILY SSF53955 9 198 7.31E-27 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu5204 d97a45a56896602ff857e7838cd2a6a1 484 Gene3D G3DSA:3.40.309.10 253 446 2.5E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Atu5204 d97a45a56896602ff857e7838cd2a6a1 484 SUPERFAMILY SSF53720 4 479 1.44E-137 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Atu5204 d97a45a56896602ff857e7838cd2a6a1 484 Pfam PF00171 Aldehyde dehydrogenase family 17 476 1.1E-143 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Atu5204 d97a45a56896602ff857e7838cd2a6a1 484 Gene3D G3DSA:3.40.605.10 17 470 2.5E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Atu4815 9c4a2d699459af7c27bc55e80d65ddfc 391 SUPERFAMILY SSF53756 1 382 2.74E-68 T 14-10-2018 Atu4815 9c4a2d699459af7c27bc55e80d65ddfc 391 Pfam PF13579 Glycosyl transferase 4-like domain 15 183 9.9E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu4815 9c4a2d699459af7c27bc55e80d65ddfc 391 Gene3D G3DSA:3.40.50.2000 184 364 3.3E-60 T 14-10-2018 Atu4815 9c4a2d699459af7c27bc55e80d65ddfc 391 Gene3D G3DSA:3.40.50.2000 9 381 3.3E-60 T 14-10-2018 Atu4815 9c4a2d699459af7c27bc55e80d65ddfc 391 Pfam PF00534 Glycosyl transferases group 1 198 362 1.2E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 Gene3D G3DSA:1.10.10.10 2 142 3.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 SUPERFAMILY SSF46785 4 142 1.79E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 SMART SM00347 29 129 8.4E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 Pfam PF01047 MarR family 39 93 5.4E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 6.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 6.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 6.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu1422 d68f1c8ba303681f06d2d7fb52f0de03 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 6.2E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Atu3050 d2ad917f4e9462c369d4477664a7ae9f 443 Gene3D G3DSA:3.50.50.60 374 416 2.8E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3050 d2ad917f4e9462c369d4477664a7ae9f 443 Gene3D G3DSA:3.30.9.10 99 273 7.1E-59 T 14-10-2018 Atu3050 d2ad917f4e9462c369d4477664a7ae9f 443 Gene3D G3DSA:3.50.50.60 20 234 7.1E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3050 d2ad917f4e9462c369d4477664a7ae9f 443 SUPERFAMILY SSF51905 19 432 1.04E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3050 d2ad917f4e9462c369d4477664a7ae9f 443 Pfam PF01266 FAD dependent oxidoreductase 20 413 6.6E-67 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu3050 d2ad917f4e9462c369d4477664a7ae9f 443 Gene3D G3DSA:3.30.9.10 330 373 2.8E-21 T 14-10-2018 Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 52 74 6.4E-5 T 14-10-2018 Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 344 6.4E-5 T 14-10-2018 Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 196 205 6.4E-5 T 14-10-2018 Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 SUPERFAMILY SSF51905 51 372 3.17E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 Gene3D G3DSA:3.50.50.60 48 100 2.1E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 134 281 3.7E-10 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Atu6077 dd0f15b3c1c5d05932a2bb7774b7a11f 495 Gene3D G3DSA:3.50.50.60 104 388 7.5E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5335 fa90637ec621b8e4236238db0d0b167b 219 Gene3D G3DSA:3.20.20.70 3 214 2.6E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu5335 fa90637ec621b8e4236238db0d0b167b 219 SUPERFAMILY SSF51395 11 188 1.78E-39 T 14-10-2018 Atu5335 fa90637ec621b8e4236238db0d0b167b 219 Pfam PF01070 FMN-dependent dehydrogenase 21 186 7.2E-49 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Atu4557 dd251a2fa4645647a4f8ac95ffdd5647 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 251 1.3E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4557 dd251a2fa4645647a4f8ac95ffdd5647 259 SUPERFAMILY SSF161098 38 259 2.35E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu4557 dd251a2fa4645647a4f8ac95ffdd5647 259 Gene3D G3DSA:1.10.3720.10 24 250 4.9E-58 T 14-10-2018 IPR035906 MetI-like superfamily Atu8064 2e9531c077db7b63fab1230eeadb39ab 35 SUPERFAMILY SSF51735 3 34 1.02E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5134 f949a6cbe519368a13430aefc2b2694f 355 Gene3D G3DSA:2.40.370.10 235 355 9.9E-32 T 14-10-2018 IPR023374 AttH-like domain superfamily Atu5134 f949a6cbe519368a13430aefc2b2694f 355 Gene3D G3DSA:2.40.370.10 47 234 4.2E-67 T 14-10-2018 IPR023374 AttH-like domain superfamily Atu5134 f949a6cbe519368a13430aefc2b2694f 355 SUPERFAMILY SSF159245 36 355 3.27E-109 T 14-10-2018 Atu5134 f949a6cbe519368a13430aefc2b2694f 355 Pfam PF07143 CrtC N-terminal lipocalin domain 59 231 1.3E-57 T 14-10-2018 IPR010791 AttH domain Atu5134 f949a6cbe519368a13430aefc2b2694f 355 Pfam PF17186 Lipocalin-like domain 234 355 5.6E-41 T 14-10-2018 Atu0637 f47981c70fadbf38662879a7b9144282 260 Gene3D G3DSA:3.40.1750.20 98 164 4.2E-52 T 14-10-2018 Atu0637 f47981c70fadbf38662879a7b9144282 260 Gene3D G3DSA:3.90.226.10 12 199 4.2E-52 T 14-10-2018 Atu0637 f47981c70fadbf38662879a7b9144282 260 Pfam PF01343 Peptidase family S49 58 201 1.0E-28 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Atu0637 f47981c70fadbf38662879a7b9144282 260 SUPERFAMILY SSF52096 16 194 4.97E-32 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 322 753 4.7E-176 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 SUPERFAMILY SSF160975 850 899 1.31E-7 T 14-10-2018 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 Pfam PF14579 Helix-hairpin-helix motif 826 914 4.0E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 Pfam PF02811 PHP domain 22 198 3.4E-35 T 14-10-2018 IPR004013 PHP domain GO:0003824 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 Gene3D G3DSA:1.10.10.1600 462 537 1.6E-26 T 14-10-2018 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 Gene3D G3DSA:3.20.20.140 3 293 3.3E-77 T 14-10-2018 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 Gene3D G3DSA:1.10.150.870 822 902 1.9E-6 T 14-10-2018 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 SUPERFAMILY SSF89550 20 287 1.02E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 SMART SM00481 21 88 5.0E-21 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Atu1292 d73e66a4f92cd3652e44a3314f98a8a2 1167 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 20 1048 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Atu2649 97409afa69b3d72419e1fe54de5fd16b 97 Gene3D G3DSA:3.30.70.1060 1 97 2.6E-30 T 14-10-2018 Atu2649 97409afa69b3d72419e1fe54de5fd16b 97 Pfam PF03795 YCII-related domain 1 88 3.5E-23 T 14-10-2018 IPR005545 YCII-related Atu2649 97409afa69b3d72419e1fe54de5fd16b 97 SUPERFAMILY SSF54909 1 92 9.65E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu1279 0b9129ab13185a41bcaf19f27a01a626 204 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 168 5.8E-37 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1279 0b9129ab13185a41bcaf19f27a01a626 204 Gene3D G3DSA:1.20.120.1200 5 170 5.0E-43 T 14-10-2018 Atu6148 03ebac0ae6d8f81056c1795b98ee91c0 294 Gene3D G3DSA:1.10.10.10 3 47 2.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0827 5da0b5def922cfe816359d1130379512 78 Gene3D G3DSA:1.10.8.1250 11 76 2.4E-5 T 14-10-2018 IPR038296 Antitoxin ParD superfamily Atu0827 5da0b5def922cfe816359d1130379512 78 SUPERFAMILY SSF47598 1 41 2.89E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu1152 3009d58a0eec3be4ab56b5439da5fb04 429 Gene3D G3DSA:1.20.1250.20 7 183 1.8E-11 T 14-10-2018 Atu1152 3009d58a0eec3be4ab56b5439da5fb04 429 Gene3D G3DSA:1.20.1250.20 194 379 1.7E-21 T 14-10-2018 Atu1152 3009d58a0eec3be4ab56b5439da5fb04 429 Pfam PF07690 Major Facilitator Superfamily 19 304 3.5E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu1152 3009d58a0eec3be4ab56b5439da5fb04 429 SUPERFAMILY SSF103473 5 385 5.89E-45 T 14-10-2018 IPR036259 MFS transporter superfamily Atu8012 aa1695eaa987a4537609bb2b984022a8 73 SUPERFAMILY SSF54909 2 66 5.37E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu8012 aa1695eaa987a4537609bb2b984022a8 73 Gene3D G3DSA:3.30.70.100 1 72 3.5E-11 T 14-10-2018 Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 SUPERFAMILY SSF51735 7 255 1.44E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5122 adcd7be4222fda95432989218916ec5b 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 7.8E-50 T 14-10-2018 Atu5122 adcd7be4222fda95432989218916ec5b 259 Gene3D G3DSA:3.40.50.720 1 256 1.5E-65 T 14-10-2018 Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 5.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5122 adcd7be4222fda95432989218916ec5b 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 5.3E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu5070 070aeff9cdb2af19b386f3299a43d7b5 304 SUPERFAMILY SSF161098 89 291 1.6E-15 T 14-10-2018 IPR035906 MetI-like superfamily Atu5070 070aeff9cdb2af19b386f3299a43d7b5 304 Gene3D G3DSA:1.10.3720.10 81 303 4.5E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu5070 070aeff9cdb2af19b386f3299a43d7b5 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 304 5.7E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu8122 ab42385c2fe5a709f9e1f5a8509f9a13 301 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 40 297 9.1E-45 T 14-10-2018 IPR019276 Protein of unkown function DUF2303 Atu3418 e47d142454490a36b0a3ba3ffb63f1f6 181 Pfam PF00583 Acetyltransferase (GNAT) family 42 133 1.0E-10 T 14-10-2018 IPR000182 GNAT domain Atu3418 e47d142454490a36b0a3ba3ffb63f1f6 181 SUPERFAMILY SSF55729 24 140 1.21E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3418 e47d142454490a36b0a3ba3ffb63f1f6 181 Gene3D G3DSA:3.40.630.30 7 164 2.5E-24 T 14-10-2018 Atu3751 795671eb1b04999f04a5c158f7acd4c8 254 Pfam PF01925 Sulfite exporter TauE/SafE 12 247 1.5E-27 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu2775 9dcad31395fc8d9ec229a5b8162d6e5a 465 Gene3D G3DSA:2.70.70.10 308 454 1.2E-23 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu2775 9dcad31395fc8d9ec229a5b8162d6e5a 465 SUPERFAMILY SSF51261 300 452 2.3E-21 T 14-10-2018 IPR011055 Duplicated hybrid motif Atu2775 9dcad31395fc8d9ec229a5b8162d6e5a 465 Pfam PF01551 Peptidase family M23 346 448 4.4E-18 T 14-10-2018 IPR016047 Peptidase M23 Atu0951 87d3f78fd649021f8f49a10ac983e6a9 402 Gene3D G3DSA:3.40.50.300 6 159 4.7E-12 T 14-10-2018 Atu0951 87d3f78fd649021f8f49a10ac983e6a9 402 Pfam PF03237 Terminase-like family 24 226 1.1E-22 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Atu0951 87d3f78fd649021f8f49a10ac983e6a9 402 Pfam PF17289 Terminase RNaseH-like domain 242 388 8.2E-21 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like Atu2413 ad047778e1c2606c34504b9515f57de8 537 Pfam PF02653 Branched-chain amino acid transport system / permease component 247 519 9.2E-55 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu2413 ad047778e1c2606c34504b9515f57de8 537 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 243 533 6.4E-129 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type Atu4199 e1e5cb7f4684ca64df5a9df1c53eaf38 190 SUPERFAMILY SSF48498 85 179 6.4E-18 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu4199 e1e5cb7f4684ca64df5a9df1c53eaf38 190 Pfam PF13305 WHG domain 93 169 3.1E-12 T 14-10-2018 IPR025996 WHG domain Atu4199 e1e5cb7f4684ca64df5a9df1c53eaf38 190 SUPERFAMILY SSF46689 6 78 1.74E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu4199 e1e5cb7f4684ca64df5a9df1c53eaf38 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu4199 e1e5cb7f4684ca64df5a9df1c53eaf38 190 Gene3D G3DSA:1.10.357.10 2 187 6.6E-42 T 14-10-2018 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 SUPERFAMILY SSF55729 174 343 1.01E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 Pfam PF13432 Tetratricopeptide repeat 366 424 1.7E-5 T 14-10-2018 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 Pfam PF13432 Tetratricopeptide repeat 437 491 0.0091 T 14-10-2018 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 SMART SM00028 362 395 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 SMART SM00028 396 429 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 SMART SM00028 430 463 5.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 Gene3D G3DSA:1.25.40.10 310 522 3.0E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 SUPERFAMILY SSF48452 359 515 3.57E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3302 1bb0f237a16898f4de6cf0efca2f3067 548 Pfam PF13480 Acetyltransferase (GNAT) domain 186 331 2.9E-27 T 14-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Atu1689 130e4f950899c7e088462913869adf93 163 SUPERFAMILY SSF55040 14 158 6.67E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1689 130e4f950899c7e088462913869adf93 163 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 5 161 38.318 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1689 130e4f950899c7e088462913869adf93 163 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 7 155 1.9E-63 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1689 130e4f950899c7e088462913869adf93 163 Pfam PF01967 MoaC family 18 153 5.2E-55 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1689 130e4f950899c7e088462913869adf93 163 Gene3D G3DSA:3.30.70.640 5 163 4.1E-68 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Atu1842 63b74f55119cc70213180fca42cccf3d 187 Pfam PF06821 Serine hydrolase 8 176 1.3E-69 T 14-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 Atu1842 63b74f55119cc70213180fca42cccf3d 187 SUPERFAMILY SSF53474 8 178 1.77E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1842 63b74f55119cc70213180fca42cccf3d 187 Gene3D G3DSA:3.40.50.1820 1 185 1.5E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1301 d8d3729e412450ab8760394a4d6aed56 228 Pfam PF00293 NUDIX domain 24 190 7.9E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu1301 d8d3729e412450ab8760394a4d6aed56 228 SUPERFAMILY SSF55811 16 198 2.14E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu1301 d8d3729e412450ab8760394a4d6aed56 228 Gene3D G3DSA:3.90.79.10 122 204 1.7E-9 T 14-10-2018 Atu1301 d8d3729e412450ab8760394a4d6aed56 228 Gene3D G3DSA:3.90.79.10 18 121 7.8E-24 T 14-10-2018 Atu0810 62ff96f279c29c9e47ce2c1b2a15b040 93 SUPERFAMILY SSF47598 3 45 5.78E-10 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu0810 62ff96f279c29c9e47ce2c1b2a15b040 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 8 84 1.0E-8 T 14-10-2018 IPR022789 Antitoxin ParD Atu0810 62ff96f279c29c9e47ce2c1b2a15b040 93 Gene3D G3DSA:1.10.8.1250 13 90 9.0E-14 T 14-10-2018 IPR038296 Antitoxin ParD superfamily Atu0810 62ff96f279c29c9e47ce2c1b2a15b040 93 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 7 78 7.3E-13 T 14-10-2018 IPR022789 Antitoxin ParD Atu6037 65d5aee097e54355aa795b6a21376d95 267 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 7 267 6.6E-90 T 14-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ Atu6037 65d5aee097e54355aa795b6a21376d95 267 Pfam PF10907 Protein of unknown function (DUF2749) 243 267 1.7E-5 T 14-10-2018 IPR024475 Type IV conjugative transfer protein TrbJ/K, C-terminal Atu6037 65d5aee097e54355aa795b6a21376d95 267 SUPERFAMILY SSF101082 63 227 6.28E-5 T 14-10-2018 Atu3135 89bb596ddd73259b0516d1d26455a5a6 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 6.9E-135 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3135 89bb596ddd73259b0516d1d26455a5a6 426 PIRSF PIRSF006066 1 426 1.7E-151 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3135 89bb596ddd73259b0516d1d26455a5a6 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 2.1E-108 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu5436 0e7aa998dbccf0316e65054bd25d2f7e 300 SUPERFAMILY SSF51658 1 298 9.95E-61 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu5436 0e7aa998dbccf0316e65054bd25d2f7e 300 Gene3D G3DSA:3.20.20.150 4 292 4.4E-49 T 14-10-2018 Atu5436 0e7aa998dbccf0316e65054bd25d2f7e 300 Pfam PF01261 Xylose isomerase-like TIM barrel 20 250 2.7E-42 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4341 fba6135d2477e8796a22760d2946c66f 493 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 490 2.1E-190 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Atu4341 fba6135d2477e8796a22760d2946c66f 493 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 490 3.7E-217 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Atu0496 61645e7810462dc2d123d0e2e87d59d0 145 Pfam PF00582 Universal stress protein family 1 144 8.1E-33 T 14-10-2018 IPR006016 UspA Atu0496 61645e7810462dc2d123d0e2e87d59d0 145 Gene3D G3DSA:3.40.50.620 1 145 1.9E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu0496 61645e7810462dc2d123d0e2e87d59d0 145 PRINTS PR01438 Universal stress protein signature 104 116 2.4E-16 T 14-10-2018 IPR006015 Universal stress protein A Atu0496 61645e7810462dc2d123d0e2e87d59d0 145 PRINTS PR01438 Universal stress protein signature 2 20 2.4E-16 T 14-10-2018 IPR006015 Universal stress protein A Atu0496 61645e7810462dc2d123d0e2e87d59d0 145 PRINTS PR01438 Universal stress protein signature 122 144 2.4E-16 T 14-10-2018 IPR006015 Universal stress protein A Atu0496 61645e7810462dc2d123d0e2e87d59d0 145 SUPERFAMILY SSF52402 1 144 1.67E-34 T 14-10-2018 Atu4896 17425cc57f1449a74225753d7cebcadf 182 Pfam PF13302 Acetyltransferase (GNAT) domain 15 154 9.9E-27 T 14-10-2018 IPR000182 GNAT domain Atu4896 17425cc57f1449a74225753d7cebcadf 182 Gene3D G3DSA:3.40.630.30 4 182 1.1E-35 T 14-10-2018 Atu4896 17425cc57f1449a74225753d7cebcadf 182 SUPERFAMILY SSF55729 10 181 2.05E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1953 8e72195fc6f32f473e835482a8a11583 116 SUPERFAMILY SSF54593 6 112 1.34E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1953 8e72195fc6f32f473e835482a8a11583 116 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 111 1.8E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu1953 8e72195fc6f32f473e835482a8a11583 116 Gene3D G3DSA:3.10.180.10 14 116 5.3E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu0431 aa3615fc4fd9a3f68b446863d93c95c4 130 Pfam PF04379 ApaG domain 19 104 6.0E-34 T 14-10-2018 IPR007474 ApaG domain Atu0431 aa3615fc4fd9a3f68b446863d93c95c4 130 Hamap MF_00791 Protein ApaG [apaG]. 2 130 34.574 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG Atu0431 aa3615fc4fd9a3f68b446863d93c95c4 130 SUPERFAMILY SSF110069 5 127 2.88E-50 T 14-10-2018 IPR036767 ApaG domain superfamily Atu0431 aa3615fc4fd9a3f68b446863d93c95c4 130 Gene3D G3DSA:2.60.40.1470 2 129 3.4E-48 T 14-10-2018 IPR036767 ApaG domain superfamily Atu3182 95780f5571124ff2d4089d9acea508e5 145 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 4 135 3.0E-5 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 Atu3182 95780f5571124ff2d4089d9acea508e5 145 Pfam PF09335 SNARE associated Golgi protein 27 140 2.2E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein Atu1650 1b1f3f3e458f1e87a8425426f1d68acb 374 Pfam PF01757 Acyltransferase family 2 344 3.2E-17 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu0209 cfa50a94dde0bdfbb245d1f47b3824d8 368 Pfam PF04332 Protein of unknown function (DUF475) 59 354 5.0E-106 T 14-10-2018 IPR007427 Protein of unknown function DUF475 Atu3232 a1b96070dc91036801f8901ac491c0c7 426 Gene3D G3DSA:3.40.50.10180 40 256 2.6E-140 T 14-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Atu3232 a1b96070dc91036801f8901ac491c0c7 426 SUPERFAMILY SSF82544 13 425 4.71E-147 T 14-10-2018 Atu3232 a1b96070dc91036801f8901ac491c0c7 426 Pfam PF13660 Domain of unknown function (DUF4147) 16 237 3.0E-84 T 14-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Atu3232 a1b96070dc91036801f8901ac491c0c7 426 Gene3D G3DSA:3.40.1480.10 257 421 2.6E-140 T 14-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Atu3232 a1b96070dc91036801f8901ac491c0c7 426 Pfam PF05161 MOFRL family 313 419 6.1E-36 T 14-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Atu2499 f59e1533e8e506bd6eed879c20a3dfaa 246 SUPERFAMILY SSF52499 14 238 1.44E-55 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu2499 f59e1533e8e506bd6eed879c20a3dfaa 246 Gene3D G3DSA:3.40.50.850 17 245 4.6E-58 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu2499 f59e1533e8e506bd6eed879c20a3dfaa 246 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 20 244 2.1E-136 T 14-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 Atu2499 f59e1533e8e506bd6eed879c20a3dfaa 246 Pfam PF00857 Isochorismatase family 35 233 2.2E-41 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu2499 f59e1533e8e506bd6eed879c20a3dfaa 246 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 18 245 61.158 T 14-10-2018 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110 Atu0599 3b071517c1c366d73749bc672530378d 232 Gene3D G3DSA:3.40.50.1360 1 232 5.0E-67 T 14-10-2018 Atu0599 3b071517c1c366d73749bc672530378d 232 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 221 2.0E-52 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Atu0599 3b071517c1c366d73749bc672530378d 232 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 7 224 3.3E-54 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Atu0599 3b071517c1c366d73749bc672530378d 232 SUPERFAMILY SSF100950 5 225 7.78E-55 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Atu2156 e5a8ffcf9b331d8eacdfd14983bb91d8 415 SUPERFAMILY SSF48208 11 405 1.07E-107 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Atu2156 e5a8ffcf9b331d8eacdfd14983bb91d8 415 Gene3D G3DSA:1.50.10.10 9 414 2.9E-140 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Atu2156 e5a8ffcf9b331d8eacdfd14983bb91d8 415 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 41 392 1.3E-129 T 14-10-2018 Atu0296 272b1fca839e382dfa3707f8d7a543ac 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 207 1.2E-13 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu0296 272b1fca839e382dfa3707f8d7a543ac 326 SUPERFAMILY SSF51735 10 269 7.45E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu0296 272b1fca839e382dfa3707f8d7a543ac 326 Gene3D G3DSA:3.40.50.720 9 262 3.5E-47 T 14-10-2018 Atu0424 db8e790829d7343b88dd4581d080ef09 241 Gene3D G3DSA:1.20.58.220 1 120 1.6E-35 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu0424 db8e790829d7343b88dd4581d080ef09 241 SUPERFAMILY SSF109755 12 231 3.87E-69 T 14-10-2018 Atu0424 db8e790829d7343b88dd4581d080ef09 241 Pfam PF01895 PhoU domain 25 113 3.3E-20 T 14-10-2018 IPR026022 PhoU domain Atu0424 db8e790829d7343b88dd4581d080ef09 241 Pfam PF01895 PhoU domain 130 213 2.8E-19 T 14-10-2018 IPR026022 PhoU domain Atu0424 db8e790829d7343b88dd4581d080ef09 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 222 3.4E-70 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Atu0424 db8e790829d7343b88dd4581d080ef09 241 PIRSF PIRSF003107 7 227 6.9E-61 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Atu0424 db8e790829d7343b88dd4581d080ef09 241 Gene3D G3DSA:1.20.58.220 121 231 4.2E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily Atu1009 05628e22b5ab769fd0e84d03277a2f60 112 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 61 111 3.5E-11 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 Atu1009 05628e22b5ab769fd0e84d03277a2f60 112 Gene3D G3DSA:2.40.128.520 49 112 3.7E-5 T 14-10-2018 Atu1520 58f72c92d33da4fcc171d07b7ca1b193 299 Gene3D G3DSA:3.40.50.300 4 252 1.6E-49 T 14-10-2018 Atu1520 58f72c92d33da4fcc171d07b7ca1b193 299 Pfam PF00005 ABC transporter 29 156 8.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu1520 58f72c92d33da4fcc171d07b7ca1b193 299 SUPERFAMILY SSF52540 10 224 3.74E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu1520 58f72c92d33da4fcc171d07b7ca1b193 299 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu1520 58f72c92d33da4fcc171d07b7ca1b193 299 SMART SM00382 37 205 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu6175 853a3953565b059a96662ac908865604 293 Gene3D G3DSA:2.60.40.2500 163 292 3.8E-37 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily Atu6175 853a3953565b059a96662ac908865604 293 Pfam PF03524 Conjugal transfer protein 32 266 6.3E-51 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Atu6175 853a3953565b059a96662ac908865604 293 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 6 268 2.6E-73 T 14-10-2018 IPR014148 P-type conjugative transfer protein VirB9 Atu4265 4dba9b3cfe81ef1b6e881ccc1e8dc279 204 Gene3D G3DSA:3.30.460.40 21 98 8.4E-7 T 14-10-2018 Atu4265 4dba9b3cfe81ef1b6e881ccc1e8dc279 204 SUPERFAMILY SSF81301 23 171 2.78E-7 T 14-10-2018 Atu1636 b7b23aaa2c508409f4ccad2dc802a227 145 Gene3D G3DSA:3.30.1150.10 24 126 1.5E-8 T 14-10-2018 Atu1636 b7b23aaa2c508409f4ccad2dc802a227 145 PIRSF PIRSF034077 15 142 1.2E-57 T 14-10-2018 IPR014587 Uncharacterised conserved protein UCP034077 Atu1636 b7b23aaa2c508409f4ccad2dc802a227 145 SUPERFAMILY SSF74653 43 118 7.85E-5 T 14-10-2018 Atu5003 7757b4e41b24a76c1c02cc848dffce88 375 SUPERFAMILY SSF51905 9 373 4.01E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5003 7757b4e41b24a76c1c02cc848dffce88 375 Gene3D G3DSA:3.30.9.10 87 317 5.6E-44 T 14-10-2018 Atu5003 7757b4e41b24a76c1c02cc848dffce88 375 Pfam PF01266 FAD dependent oxidoreductase 9 353 2.0E-38 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu5003 7757b4e41b24a76c1c02cc848dffce88 375 Gene3D G3DSA:3.50.50.60 9 359 5.6E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5521 9e7c50764dbbd58c710595e8f9a3a48a 259 SMART SM00382 33 225 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu5521 9e7c50764dbbd58c710595e8f9a3a48a 259 SUPERFAMILY SSF52540 7 247 3.0E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5521 9e7c50764dbbd58c710595e8f9a3a48a 259 Gene3D G3DSA:3.40.50.300 3 249 4.4E-50 T 14-10-2018 Atu5521 9e7c50764dbbd58c710595e8f9a3a48a 259 Pfam PF00005 ABC transporter 24 175 5.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu3752 0599e343467735d992d2b25aec13a5f6 58 Gene3D G3DSA:1.20.58.660 2 58 1.2E-7 T 14-10-2018 Atu3752 0599e343467735d992d2b25aec13a5f6 58 Pfam PF04325 Protein of unknown function (DUF465) 8 53 4.5E-14 T 14-10-2018 IPR007420 Protein of unknown function DUF465 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 Gene3D G3DSA:3.30.930.10 3 375 3.0E-99 T 14-10-2018 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 15 459 2.6E-115 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 Pfam PF03129 Anticodon binding domain 384 466 9.0E-9 T 14-10-2018 IPR004154 Anticodon-binding Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 PIRSF PIRSF001549 9 474 9.4E-127 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 SUPERFAMILY SSF52954 381 493 5.07E-16 T 14-10-2018 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 Gene3D G3DSA:3.40.50.800 380 495 1.6E-18 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 Pfam PF13393 Histidyl-tRNA synthetase 18 363 4.9E-44 T 14-10-2018 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 SUPERFAMILY SSF55681 13 372 2.19E-72 T 14-10-2018 Atu0676 b28a5a1392e5630d377f2ef5d794913e 507 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 11 491 26.646 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Atu0066 7e5fadfd4353af65d3b37dc1c2a168a3 209 SUPERFAMILY SSF52540 19 200 6.83E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0066 7e5fadfd4353af65d3b37dc1c2a168a3 209 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 23 160 7.3E-7 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Atu0066 7e5fadfd4353af65d3b37dc1c2a168a3 209 Gene3D G3DSA:3.40.50.300 3 207 7.8E-53 T 14-10-2018 Atu1908 34449edeece4364ee7b881837a0c88d1 273 Pfam PF01925 Sulfite exporter TauE/SafE 14 266 4.1E-46 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 Gene3D G3DSA:2.40.420.20 46 358 1.5E-55 T 14-10-2018 Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 267 3.0E-9 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 SUPERFAMILY SSF111369 57 269 3.92E-19 T 14-10-2018 Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 360 3.3E-60 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 Gene3D G3DSA:2.40.30.170 53 286 1.5E-55 T 14-10-2018 Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 Gene3D G3DSA:1.10.287.470 101 173 1.5E-55 T 14-10-2018 Atu4218 0c9fe2d7fa817d5ab5c0c9b83cc1109f 369 Gene3D G3DSA:2.40.50.100 67 213 1.5E-55 T 14-10-2018 Atu3544 9f271a8085f19fff274f932036d74d83 417 PRINTS PR00758 Arsenical pump membrane protein signature 358 383 2.7E-26 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atu3544 9f271a8085f19fff274f932036d74d83 417 PRINTS PR00758 Arsenical pump membrane protein signature 391 415 2.7E-26 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atu3544 9f271a8085f19fff274f932036d74d83 417 PRINTS PR00758 Arsenical pump membrane protein signature 179 202 2.7E-26 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atu3544 9f271a8085f19fff274f932036d74d83 417 PRINTS PR00758 Arsenical pump membrane protein signature 276 300 2.7E-26 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atu3544 9f271a8085f19fff274f932036d74d83 417 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 2.7E-26 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atu3544 9f271a8085f19fff274f932036d74d83 417 Pfam PF02040 Arsenical pump membrane protein 28 415 1.7E-33 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Atu4568 17396cf4328dbb1ae4a0563f8e59c8af 409 Pfam PF13416 Bacterial extracellular solute-binding protein 71 370 6.4E-21 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4568 17396cf4328dbb1ae4a0563f8e59c8af 409 Gene3D G3DSA:3.40.190.10 49 169 6.5E-14 T 14-10-2018 Atu4568 17396cf4328dbb1ae4a0563f8e59c8af 409 Gene3D G3DSA:3.40.190.10 170 357 1.3E-8 T 14-10-2018 Atu4568 17396cf4328dbb1ae4a0563f8e59c8af 409 SUPERFAMILY SSF53850 53 379 1.86E-37 T 14-10-2018 Atu3331 b6608d0024da9ef276e3014f247a331c 261 SUPERFAMILY SSF141523 82 224 7.98E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu3331 b6608d0024da9ef276e3014f247a331c 261 Gene3D G3DSA:2.40.440.10 50 238 1.5E-38 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu3331 b6608d0024da9ef276e3014f247a331c 261 Pfam PF03734 L,D-transpeptidase catalytic domain 86 223 8.5E-18 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu4255 7b66915ef8fb06534c7749d96183628e 174 Gene3D G3DSA:3.40.630.30 2 164 1.7E-39 T 14-10-2018 Atu4255 7b66915ef8fb06534c7749d96183628e 174 SUPERFAMILY SSF55729 2 147 1.45E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu4255 7b66915ef8fb06534c7749d96183628e 174 Pfam PF13302 Acetyltransferase (GNAT) domain 9 146 6.2E-31 T 14-10-2018 IPR000182 GNAT domain Atu0932 1b71920b500c31274de2933319b44e51 159 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 8.7E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Atu0932 1b71920b500c31274de2933319b44e51 159 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 147 42.807 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Atu0932 1b71920b500c31274de2933319b44e51 159 PIRSF PIRSF006173 1 147 6.4E-68 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Atu5424 9f6f3a79fae1be24a67cbb9995b8b77c 492 SUPERFAMILY SSF51905 48 362 6.41E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu5424 9f6f3a79fae1be24a67cbb9995b8b77c 492 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 50 264 7.6E-16 T 14-10-2018 Atu5424 9f6f3a79fae1be24a67cbb9995b8b77c 492 Gene3D G3DSA:3.50.50.60 38 383 9.3E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu3512 a4bbe48954056ef93fd8bd31f8267a25 263 SUPERFAMILY SSF53271 84 256 1.57E-29 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Atu3512 a4bbe48954056ef93fd8bd31f8267a25 263 Pfam PF00156 Phosphoribosyl transferase domain 213 254 1.2E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Atu3512 a4bbe48954056ef93fd8bd31f8267a25 263 Gene3D G3DSA:3.40.50.2020 101 260 2.6E-16 T 14-10-2018 Atu1563 b68afa1bf541e84b8b7f1235e6260c97 115 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 102 4.7E-22 T 14-10-2018 IPR003849 Preprotein translocase YajC Atu1563 b68afa1bf541e84b8b7f1235e6260c97 115 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 1.8E-12 T 14-10-2018 IPR003849 Preprotein translocase YajC Atu1563 b68afa1bf541e84b8b7f1235e6260c97 115 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 1.8E-12 T 14-10-2018 IPR003849 Preprotein translocase YajC Atu1563 b68afa1bf541e84b8b7f1235e6260c97 115 Pfam PF02699 Preprotein translocase subunit 24 100 1.5E-23 T 14-10-2018 IPR003849 Preprotein translocase YajC Atu1563 b68afa1bf541e84b8b7f1235e6260c97 115 SMART SM01323 20 103 4.6E-35 T 14-10-2018 IPR003849 Preprotein translocase YajC Atu2033 f761e2b06f48b3b49c2e7a15c86e0c52 177 Gene3D G3DSA:3.30.530.20 10 176 2.0E-41 T 14-10-2018 IPR023393 START-like domain superfamily Atu2033 f761e2b06f48b3b49c2e7a15c86e0c52 177 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 28 152 1.8E-19 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Atu2033 f761e2b06f48b3b49c2e7a15c86e0c52 177 SUPERFAMILY SSF55961 4 174 6.08E-37 T 14-10-2018 Atu4193 71f2ea478c431a905bef4578cf5fd352 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 326 9.3E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4193 71f2ea478c431a905bef4578cf5fd352 328 Gene3D G3DSA:1.10.3720.10 84 327 6.7E-16 T 14-10-2018 IPR035906 MetI-like superfamily Atu4193 71f2ea478c431a905bef4578cf5fd352 328 SUPERFAMILY SSF161098 96 314 5.63E-14 T 14-10-2018 IPR035906 MetI-like superfamily Atu2519 0049d1ee434ee78f5f8f0aa2098a0118 346 SUPERFAMILY SSF51556 5 345 1.08E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu2519 0049d1ee434ee78f5f8f0aa2098a0118 346 Gene3D G3DSA:3.20.20.140 3 346 3.1E-121 T 14-10-2018 Atu2519 0049d1ee434ee78f5f8f0aa2098a0118 346 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 4 341 4.3E-111 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Atu2235 17572f471a71f6c0e7db396a8361fefd 155 Pfam PF01575 MaoC like domain 9 109 5.7E-9 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Atu2235 17572f471a71f6c0e7db396a8361fefd 155 Gene3D G3DSA:3.10.129.10 3 154 1.1E-29 T 14-10-2018 Atu2235 17572f471a71f6c0e7db396a8361fefd 155 SUPERFAMILY SSF54637 8 152 3.33E-24 T 14-10-2018 IPR029069 HotDog domain superfamily Atu1206 8491b1d62515e04257dfd3d66aa322f5 103 Pfam PF10115 Transcriptional activator HlyU 3 100 7.8E-34 T 14-10-2018 IPR018772 Transcription activator HlyU Atu4458 b5a651409e711b6dea3d7c14189713ae 160 Pfam PF10003 Integral membrane protein (DUF2244) 14 153 2.7E-45 T 14-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane Atu4458 b5a651409e711b6dea3d7c14189713ae 160 PIRSF PIRSF032162 1 160 1.1E-72 T 14-10-2018 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane Atu2159 6af62b243b778b463e8dc75b8655cc3a 209 Gene3D G3DSA:2.40.160.20 41 209 9.8E-19 T 14-10-2018 Atu2159 6af62b243b778b463e8dc75b8655cc3a 209 Pfam PF13505 Outer membrane protein beta-barrel domain 9 209 2.8E-25 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel Atu2159 6af62b243b778b463e8dc75b8655cc3a 209 SUPERFAMILY SSF56925 39 209 1.65E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 SMART SM00869 914 1177 2.2E-38 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 SUPERFAMILY SSF103515 865 1192 5.62E-44 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 730 1192 1.5E-122 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 Pfam PF03797 Autotransporter beta-domain 917 1166 1.1E-40 T 14-10-2018 IPR005546 Autotransporter beta-domain Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 SUPERFAMILY SSF51126 457 845 3.77E-28 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 Gene3D G3DSA:2.160.20.20 685 848 1.0E-42 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Atu5354 965fa601bb476ae1191a0fa3c558bb67 1192 Gene3D G3DSA:2.40.128.130 858 1192 2.9E-73 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 SUPERFAMILY SSF51735 5 260 2.32E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 Gene3D G3DSA:3.40.50.720 6 260 1.1E-82 T 14-10-2018 Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1905 87b2fae2d4ea3af6e459da2a132be207 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 258 2.6E-63 T 14-10-2018 Atu4334 a623d98014a982a6eb478a682e8fb7c8 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 444 8.9E-157 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Atu4334 a623d98014a982a6eb478a682e8fb7c8 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 445 3.3E-164 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Atu0036 66b820f9bffb9f5a9b350f3e250345f4 144 SUPERFAMILY SSF110916 20 107 8.11E-10 T 14-10-2018 Atu0036 66b820f9bffb9f5a9b350f3e250345f4 144 Gene3D G3DSA:3.30.160.20 6 143 9.8E-36 T 14-10-2018 Atu0036 66b820f9bffb9f5a9b350f3e250345f4 144 Pfam PF00472 RF-1 domain 12 138 2.0E-22 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Atu4771 fe99abd574db807c329af146f9722a90 415 SUPERFAMILY SSF51182 45 411 2.03E-90 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4771 fe99abd574db807c329af146f9722a90 415 Gene3D G3DSA:2.60.120.10 46 405 2.9E-137 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4771 fe99abd574db807c329af146f9722a90 415 Gene3D G3DSA:2.60.120.10 87 262 2.9E-137 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu4771 fe99abd574db807c329af146f9722a90 415 Pfam PF00190 Cupin 263 401 2.1E-20 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 Atu4771 fe99abd574db807c329af146f9722a90 415 Pfam PF00190 Cupin 89 220 4.9E-21 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 Atu4771 fe99abd574db807c329af146f9722a90 415 SMART SM00835 261 403 4.9E-29 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 Atu4771 fe99abd574db807c329af146f9722a90 415 SMART SM00835 84 224 1.0E-19 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 Atu4771 fe99abd574db807c329af146f9722a90 415 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 44 412 9.9E-168 T 14-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 Atu0344 b0671a2a74e87aa6faa499b988e427e4 293 SUPERFAMILY SSF55729 37 260 6.56E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu0344 b0671a2a74e87aa6faa499b988e427e4 293 Gene3D G3DSA:3.40.630.30 36 187 2.6E-19 T 14-10-2018 Atu0344 b0671a2a74e87aa6faa499b988e427e4 293 Pfam PF13444 Acetyltransferase (GNAT) domain 54 164 1.4E-33 T 14-10-2018 Atu0288 4c298a1d6255074c5c432ef44bc2516f 425 Pfam PF09375 Imelysin 42 396 3.9E-98 T 14-10-2018 IPR018976 Imelysin-like domain Atu0288 4c298a1d6255074c5c432ef44bc2516f 425 Gene3D G3DSA:1.20.1420.20 17 402 1.3E-81 T 14-10-2018 IPR038352 Imelysin-like domain superfamily Atu1945 b0ff5d1a0a0b82b734efa50c6ff337b5 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 31.185 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1945 b0ff5d1a0a0b82b734efa50c6ff337b5 206 Gene3D G3DSA:3.40.1370.10 1 206 8.5E-74 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Atu1945 b0ff5d1a0a0b82b734efa50c6ff337b5 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 203 1.4E-70 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Atu1945 b0ff5d1a0a0b82b734efa50c6ff337b5 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 204 9.3E-64 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Atu1945 b0ff5d1a0a0b82b734efa50c6ff337b5 206 SUPERFAMILY SSF52166 1 205 1.31E-72 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 Gene3D G3DSA:4.10.520.10 1 91 5.6E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.0E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 SMART SM00411 1 90 7.4E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.6E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.6E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.6E-16 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Atu1262 34fab1e2d565b1cc44f3579f2581dbf1 91 SUPERFAMILY SSF47729 1 90 1.06E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Atu0547 c219d1146847e5779b9b753b05ffd8ca 166 Pfam PF03748 Flagellar basal body-associated protein FliL 77 165 3.3E-11 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Atu3547 4b1daa65afb81ffc4466e834cc679a4d 218 Pfam PF09929 Putative PD-(D/E)XK phosphodiesterase (DUF2161) 102 209 5.0E-38 T 14-10-2018 IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) Atu3166 a726e16c51884d5fbf49224661160158 329 Gene3D G3DSA:3.40.1190.20 15 322 6.1E-67 T 14-10-2018 IPR029056 Ribokinase-like Atu3166 a726e16c51884d5fbf49224661160158 329 SUPERFAMILY SSF53613 16 320 7.02E-64 T 14-10-2018 IPR029056 Ribokinase-like Atu3166 a726e16c51884d5fbf49224661160158 329 Pfam PF00294 pfkB family carbohydrate kinase 47 308 5.7E-39 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu5238 4cb1e0a19755388accbc774a9d9cee18 335 Gene3D G3DSA:3.40.630.10 2 335 9.8E-90 T 14-10-2018 Atu5238 4cb1e0a19755388accbc774a9d9cee18 335 SUPERFAMILY SSF53187 17 331 1.78E-53 T 14-10-2018 Atu5238 4cb1e0a19755388accbc774a9d9cee18 335 PIRSF PIRSF039012 1 335 1.4E-74 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Atu5238 4cb1e0a19755388accbc774a9d9cee18 335 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 330 5.9E-77 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Atu8153 2c5f355a813d429b408d5fd9f467fc0c 143 SUPERFAMILY SSF54427 3 117 2.41E-6 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu8153 2c5f355a813d429b408d5fd9f467fc0c 143 Gene3D G3DSA:3.10.450.50 1 126 3.6E-5 T 14-10-2018 Atu5089 9884462f7c7e7fa17190324d74d2a4b9 371 Gene3D G3DSA:3.30.450.20 86 191 3.1E-10 T 14-10-2018 Atu0927 4f8eb7268e5081955ddf249548db9266 202 Pfam PF01810 LysE type translocator 14 200 1.3E-39 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu2631 afedcf102cc5f3866295b45447758334 166 Pfam PF01292 Prokaryotic cytochrome b561 9 166 4.3E-21 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Atu2631 afedcf102cc5f3866295b45447758334 166 SUPERFAMILY SSF81342 8 166 6.67E-20 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Atu3169 03bc6860592d3416d6e8677c85fa0794 274 Gene3D G3DSA:1.10.3720.10 1 262 1.5E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu3169 03bc6860592d3416d6e8677c85fa0794 274 SUPERFAMILY SSF161098 7 274 2.24E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu3169 03bc6860592d3416d6e8677c85fa0794 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 263 1.6E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3650 1237269162614622beb46217ed46e36a 191 SUPERFAMILY SSF55729 5 161 1.54E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3650 1237269162614622beb46217ed46e36a 191 Gene3D G3DSA:3.40.630.30 1 163 4.6E-28 T 14-10-2018 Atu3650 1237269162614622beb46217ed46e36a 191 Pfam PF13302 Acetyltransferase (GNAT) domain 13 152 3.2E-22 T 14-10-2018 IPR000182 GNAT domain Atu6001 da9fd0eed0015d0fc5ee6d58d17c2903 227 Pfam PF02027 RolB/RolC glucosidase family 3 200 1.0E-57 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu2752 d5ecb06126ab4aa4679787180c23615f 138 Pfam PF01479 S4 domain 13 59 4.6E-15 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu2752 d5ecb06126ab4aa4679787180c23615f 138 SUPERFAMILY SSF55174 11 96 7.92E-23 T 14-10-2018 Atu2752 d5ecb06126ab4aa4679787180c23615f 138 Gene3D G3DSA:3.10.290.10 7 111 3.0E-26 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Atu2752 d5ecb06126ab4aa4679787180c23615f 138 SMART SM00363 13 72 1.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu0704 3103ab15f62c92acdbf71c699b55cb9a 304 SUPERFAMILY SSF53067 1 75 3.24E-6 T 14-10-2018 Atu0704 3103ab15f62c92acdbf71c699b55cb9a 304 Gene3D G3DSA:3.30.420.300 1 79 1.3E-29 T 14-10-2018 Atu0704 3103ab15f62c92acdbf71c699b55cb9a 304 Pfam PF05035 2-keto-3-deoxy-galactonokinase 10 297 2.9E-99 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 Atu0704 3103ab15f62c92acdbf71c699b55cb9a 304 Gene3D G3DSA:3.30.420.310 80 304 5.4E-79 T 14-10-2018 Atu3395 aa6e9fabeb33167d90690a26f2c5291b 317 Pfam PF01032 FecCD transport family 5 310 6.1E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu3395 aa6e9fabeb33167d90690a26f2c5291b 317 Gene3D G3DSA:1.10.3470.10 1 317 4.0E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu3395 aa6e9fabeb33167d90690a26f2c5291b 317 SUPERFAMILY SSF81345 25 310 1.44E-74 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu2510 2a0d29d2e47a9471dc658736282033d8 352 Gene3D G3DSA:3.60.70.12 7 352 6.2E-116 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu2510 2a0d29d2e47a9471dc658736282033d8 352 Pfam PF03576 Peptidase family S58 25 329 2.4E-104 T 14-10-2018 IPR005321 Peptidase S58, DmpA Atu2510 2a0d29d2e47a9471dc658736282033d8 352 SUPERFAMILY SSF56266 6 350 9.94E-93 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Atu1847 9666e877cb2d6c4620df3ad06b4c4790 101 Pfam PF06568 Domain of unknown function (DUF1127) 56 84 4.7E-8 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 Atu3750 24ee991e608b81e642a91c50e8b48dc7 217 Gene3D G3DSA:3.20.20.70 2 211 3.3E-29 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3750 24ee991e608b81e642a91c50e8b48dc7 217 SUPERFAMILY SSF51391 5 200 3.92E-38 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu3750 24ee991e608b81e642a91c50e8b48dc7 217 Pfam PF02581 Thiamine monophosphate synthase 10 189 8.4E-37 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Atu1821 f090def0440b01e0b5fac44223b17949 408 PIRSF PIRSF005572 24 405 3.9E-51 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Atu1821 f090def0440b01e0b5fac44223b17949 408 Gene3D G3DSA:3.40.640.10 38 298 2.8E-169 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu1821 f090def0440b01e0b5fac44223b17949 408 SUPERFAMILY SSF53383 5 402 8.11E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1821 f090def0440b01e0b5fac44223b17949 408 Pfam PF00266 Aminotransferase class-V 28 396 1.1E-142 T 14-10-2018 IPR000192 Aminotransferase class V domain Atu1821 f090def0440b01e0b5fac44223b17949 408 Gene3D G3DSA:3.90.1150.10 10 400 2.8E-169 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Atu1821 f090def0440b01e0b5fac44223b17949 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 9 407 2.1E-178 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Atu4308 dc1d19eb752f1cc51728743959edcaf1 271 Pfam PF09955 Predicted integral membrane protein (DUF2189) 73 198 2.8E-38 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 Atu6041 acecb95c526261f78f0135c2476c8f21 323 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 212 226 - T 14-10-2018 IPR001482 Type II/IV secretion system protein Atu6041 acecb95c526261f78f0135c2476c8f21 323 Gene3D G3DSA:3.40.50.300 117 322 2.1E-54 T 14-10-2018 Atu6041 acecb95c526261f78f0135c2476c8f21 323 SUPERFAMILY SSF52540 11 290 7.83E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu6041 acecb95c526261f78f0135c2476c8f21 323 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 9 310 4.3E-151 T 14-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 Atu6041 acecb95c526261f78f0135c2476c8f21 323 Pfam PF00437 Type II/IV secretion system protein 23 288 1.0E-85 T 14-10-2018 IPR001482 Type II/IV secretion system protein Atu6041 acecb95c526261f78f0135c2476c8f21 323 Gene3D G3DSA:3.30.450.90 18 116 9.4E-12 T 14-10-2018 Atu3558 59463f12e76a0bb052dedfd22ea3eb98 404 Pfam PF13692 Glycosyl transferases group 1 231 364 1.3E-19 T 14-10-2018 Atu3558 59463f12e76a0bb052dedfd22ea3eb98 404 Gene3D G3DSA:3.40.50.2000 1 220 9.1E-27 T 14-10-2018 Atu3558 59463f12e76a0bb052dedfd22ea3eb98 404 Pfam PF13579 Glycosyl transferase 4-like domain 16 207 1.8E-19 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu3558 59463f12e76a0bb052dedfd22ea3eb98 404 SUPERFAMILY SSF53756 1 398 1.8E-64 T 14-10-2018 Atu3558 59463f12e76a0bb052dedfd22ea3eb98 404 Gene3D G3DSA:3.40.50.2000 221 380 2.1E-27 T 14-10-2018 Atu3245 c9003573a52a7ac0e7a69350dd17c668 297 Gene3D G3DSA:3.40.190.10 25 272 1.4E-87 T 14-10-2018 Atu3245 c9003573a52a7ac0e7a69350dd17c668 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 267 1.2E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3245 c9003573a52a7ac0e7a69350dd17c668 297 SUPERFAMILY SSF53850 1 270 9.66E-57 T 14-10-2018 Atu3245 c9003573a52a7ac0e7a69350dd17c668 297 SMART SM00062 36 269 3.2E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Atu3245 c9003573a52a7ac0e7a69350dd17c668 297 Gene3D G3DSA:3.40.190.10 130 225 1.4E-87 T 14-10-2018 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Gene3D G3DSA:3.90.1170.50 62 161 2.0E-68 T 14-10-2018 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 SUPERFAMILY SSF56003 153 764 2.36E-160 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 47 160 2.0E-20 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Atu5500 cf35940d2c8051b6c728621af6d4236a 767 SUPERFAMILY SSF54665 27 173 4.84E-37 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Gene3D G3DSA:3.30.365.10 45 305 2.0E-68 T 14-10-2018 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 186 707 2.3E-116 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Gene3D G3DSA:3.30.365.10 461 621 2.2E-103 T 14-10-2018 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 SMART SM01008 47 161 7.0E-32 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Gene3D G3DSA:3.30.365.10 162 342 2.0E-68 T 14-10-2018 Atu5500 cf35940d2c8051b6c728621af6d4236a 767 Gene3D G3DSA:3.30.365.10 388 761 2.2E-103 T 14-10-2018 Atu2500 5a07f417db4f0263661bbfe33b3d454f 363 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 355 1.0E-211 T 14-10-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 Atu2500 5a07f417db4f0263661bbfe33b3d454f 363 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 67.785 T 14-10-2018 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 Atu2500 5a07f417db4f0263661bbfe33b3d454f 363 SUPERFAMILY SSF51679 1 355 1.02E-72 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu2500 5a07f417db4f0263661bbfe33b3d454f 363 Pfam PF00296 Luciferase-like monooxygenase 1 320 1.4E-63 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu2500 5a07f417db4f0263661bbfe33b3d454f 363 Gene3D G3DSA:3.20.20.30 1 357 3.3E-76 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3892 242d61daa7c9681326663487e41d0e00 97 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 9 96 1.2E-35 T 14-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane Atu3954 af088f0560717d39645b6ec2852c7478 283 SUPERFAMILY SSF161098 86 270 2.49E-35 T 14-10-2018 IPR035906 MetI-like superfamily Atu3954 af088f0560717d39645b6ec2852c7478 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 266 1.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3954 af088f0560717d39645b6ec2852c7478 283 Gene3D G3DSA:1.10.3720.10 83 272 4.2E-30 T 14-10-2018 IPR035906 MetI-like superfamily Atu3967 8bf66dc7b55b8de2ed672fbe915c192e 423 Pfam PF13416 Bacterial extracellular solute-binding protein 45 345 3.9E-25 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3967 8bf66dc7b55b8de2ed672fbe915c192e 423 SUPERFAMILY SSF53850 26 421 9.24E-55 T 14-10-2018 Atu3967 8bf66dc7b55b8de2ed672fbe915c192e 423 Gene3D G3DSA:3.40.190.10 19 419 1.7E-58 T 14-10-2018 Atu4808 ffd59a67fd504f030d8580add68c2823 410 Pfam PF04230 Polysaccharide pyruvyl transferase 13 328 2.2E-25 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase Atu2816 bd7059ab1c60f9ef2a75f42b4aed0683 337 SUPERFAMILY SSF51430 6 322 8.64E-59 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu2816 bd7059ab1c60f9ef2a75f42b4aed0683 337 Gene3D G3DSA:3.20.20.100 5 323 5.7E-57 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu2816 bd7059ab1c60f9ef2a75f42b4aed0683 337 Pfam PF00248 Aldo/keto reductase family 19 321 3.3E-43 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4083 c6ca118060ebd5c7da0c4ab279cfba12 327 Gene3D G3DSA:2.70.98.10 6 324 1.5E-54 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Atu4083 c6ca118060ebd5c7da0c4ab279cfba12 327 Pfam PF01263 Aldose 1-epimerase 17 319 4.0E-38 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Atu4083 c6ca118060ebd5c7da0c4ab279cfba12 327 SUPERFAMILY SSF74650 8 323 4.58E-54 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu2336 05a52f3fd9bfed1ea49c39537bc34682 205 SUPERFAMILY SSF141523 62 203 1.19E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2336 05a52f3fd9bfed1ea49c39537bc34682 205 Pfam PF03734 L,D-transpeptidase catalytic domain 68 202 5.5E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu2336 05a52f3fd9bfed1ea49c39537bc34682 205 Gene3D G3DSA:2.40.440.10 21 205 4.6E-42 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu2812 4a19d70ea78db4587b61fe4f89f10f96 109 SUPERFAMILY SSF54909 1 109 9.65E-36 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu2812 4a19d70ea78db4587b61fe4f89f10f96 109 Gene3D G3DSA:3.30.70.100 1 96 9.8E-30 T 14-10-2018 Atu2812 4a19d70ea78db4587b61fe4f89f10f96 109 Pfam PF05336 L-rhamnose mutarotase 3 108 2.4E-37 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 Atu3424 c240dd2b876dbd1258f4611dde334cbb 314 SUPERFAMILY SSF56645 40 188 1.2E-14 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Atu3424 c240dd2b876dbd1258f4611dde334cbb 314 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 115 3.5E-5 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Atu3424 c240dd2b876dbd1258f4611dde334cbb 314 Gene3D G3DSA:1.10.540.10 22 118 6.1E-11 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Atu5163 a400781694276c696d169aa989e1b070 99 Pfam PF04956 TrbC/VIRB2 family 10 96 5.2E-24 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Atu4368 23c055cc5269a7375e80eb3d54414eb2 131 Pfam PF07883 Cupin domain 42 98 4.8E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Atu4368 23c055cc5269a7375e80eb3d54414eb2 131 SUPERFAMILY SSF51182 12 129 7.83E-30 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu4368 23c055cc5269a7375e80eb3d54414eb2 131 Gene3D G3DSA:2.60.120.10 1 130 3.8E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3560 ce5eb4fbafe800d35b4cd3731d4997e5 382 Gene3D G3DSA:3.40.50.2000 180 367 6.0E-66 T 14-10-2018 Atu3560 ce5eb4fbafe800d35b4cd3731d4997e5 382 SUPERFAMILY SSF53756 5 380 4.08E-75 T 14-10-2018 Atu3560 ce5eb4fbafe800d35b4cd3731d4997e5 382 Pfam PF00534 Glycosyl transferases group 1 202 359 3.3E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Atu3560 ce5eb4fbafe800d35b4cd3731d4997e5 382 Gene3D G3DSA:3.40.50.2000 13 179 6.0E-66 T 14-10-2018 Atu3560 ce5eb4fbafe800d35b4cd3731d4997e5 382 Pfam PF13439 Glycosyltransferase Family 4 68 182 2.5E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Atu3678 3751701152d6f5eaa465ecb7f5e97ff6 79 Pfam PF03621 MbtH-like protein 1 52 1.1E-19 T 14-10-2018 IPR005153 MbtH-like domain Atu3678 3751701152d6f5eaa465ecb7f5e97ff6 79 SUPERFAMILY SSF160582 2 69 7.19E-26 T 14-10-2018 IPR038020 MbtH-like domain superfamily Atu3678 3751701152d6f5eaa465ecb7f5e97ff6 79 Gene3D G3DSA:3.90.820.10 1 72 3.6E-28 T 14-10-2018 Atu3678 3751701152d6f5eaa465ecb7f5e97ff6 79 SMART SM00923 5 53 1.9E-14 T 14-10-2018 IPR005153 MbtH-like domain Atu4357 774237bbe82ff372966f54e725c21005 221 Gene3D G3DSA:3.10.620.30 41 209 3.7E-27 T 14-10-2018 Atu4357 774237bbe82ff372966f54e725c21005 221 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 32 189 2.5E-68 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Atu3409 fe0e5ac6d247bb5bcbcf4cd9a8ce994c 536 Gene3D G3DSA:3.40.190.10 215 514 2.2E-96 T 14-10-2018 Atu3409 fe0e5ac6d247bb5bcbcf4cd9a8ce994c 536 PIRSF PIRSF002741 21 535 4.7E-72 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu3409 fe0e5ac6d247bb5bcbcf4cd9a8ce994c 536 SUPERFAMILY SSF53850 55 526 9.91E-114 T 14-10-2018 Atu3409 fe0e5ac6d247bb5bcbcf4cd9a8ce994c 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 107 449 4.2E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu3409 fe0e5ac6d247bb5bcbcf4cd9a8ce994c 536 Gene3D G3DSA:3.10.105.10 290 505 2.2E-96 T 14-10-2018 Atu3409 fe0e5ac6d247bb5bcbcf4cd9a8ce994c 536 Gene3D G3DSA:3.90.76.10 74 214 2.2E-96 T 14-10-2018 Atu2696 8d735c8fbca2956232904839a9e61fb6 356 Pfam PF12706 Beta-lactamase superfamily domain 112 311 1.3E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu2696 8d735c8fbca2956232904839a9e61fb6 356 Gene3D G3DSA:3.60.15.10 83 356 1.5E-73 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2696 8d735c8fbca2956232904839a9e61fb6 356 SUPERFAMILY SSF56281 94 337 9.43E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2696 8d735c8fbca2956232904839a9e61fb6 356 SMART SM00849 100 305 0.0099 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu2696 8d735c8fbca2956232904839a9e61fb6 356 PIRSF PIRSF038896 65 354 4.0E-85 T 14-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 Atu0196 4430cc18fc17c54014d6285d1b1f5474 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 229 4.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0196 4430cc18fc17c54014d6285d1b1f5474 246 SUPERFAMILY SSF161098 48 228 3.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu0196 4430cc18fc17c54014d6285d1b1f5474 246 Gene3D G3DSA:1.10.3720.10 45 240 8.7E-24 T 14-10-2018 IPR035906 MetI-like superfamily Atu4570 9e971fcfd545bafeb5d6b3389f044400 284 SUPERFAMILY SSF161098 8 271 1.31E-46 T 14-10-2018 IPR035906 MetI-like superfamily Atu4570 9e971fcfd545bafeb5d6b3389f044400 284 Gene3D G3DSA:1.10.3720.10 9 275 2.6E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu4570 9e971fcfd545bafeb5d6b3389f044400 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 274 1.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3510 36f66990549535f744c7f6bbbbd562c4 286 Gene3D G3DSA:3.60.110.10 3 270 1.1E-82 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu3510 36f66990549535f744c7f6bbbbd562c4 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Atu3510 36f66990549535f744c7f6bbbbd562c4 286 Pfam PF00795 Carbon-nitrogen hydrolase 4 258 4.7E-49 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu3510 36f66990549535f744c7f6bbbbd562c4 286 SUPERFAMILY SSF56317 3 265 1.7E-74 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu1354 cda8dc20306e6cf6b656840b05262465 166 Gene3D G3DSA:3.30.70.560 1 163 4.4E-53 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atu1354 cda8dc20306e6cf6b656840b05262465 166 SUPERFAMILY SSF55083 1 150 8.24E-51 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atu1354 cda8dc20306e6cf6b656840b05262465 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 1 128 3.2E-43 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atu1354 cda8dc20306e6cf6b656840b05262465 166 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 83 94 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atu1354 cda8dc20306e6cf6b656840b05262465 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 1 128 1.0E-35 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Atu4347 34a3be69c6bc9c957f48ee9f24201b6b 166 Gene3D G3DSA:2.30.30.1010 73 161 4.6E-29 T 14-10-2018 Atu4347 34a3be69c6bc9c957f48ee9f24201b6b 166 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 43 158 2.3E-20 T 14-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 Atu4350 2ccfc512112fda4b30291cc96f3c1291 278 Pfam PF15604 Novel toxin 15 100 247 1.1E-51 T 14-10-2018 IPR028949 Novel toxin 15 Atu2199 6977e4655e487e72d5780c904d5755bc 300 SUPERFAMILY SSF103481 190 284 9.81E-12 T 14-10-2018 Atu2199 6977e4655e487e72d5780c904d5755bc 300 SUPERFAMILY SSF103481 39 140 2.62E-10 T 14-10-2018 Atu2199 6977e4655e487e72d5780c904d5755bc 300 Pfam PF00892 EamA-like transporter family 8 139 3.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu2199 6977e4655e487e72d5780c904d5755bc 300 Pfam PF00892 EamA-like transporter family 148 282 2.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0636 7fb12bd1b74e8cbb08e7a9d1cf27a8e7 236 Gene3D G3DSA:3.40.50.150 2 220 3.0E-53 T 14-10-2018 Atu0636 7fb12bd1b74e8cbb08e7a9d1cf27a8e7 236 SUPERFAMILY SSF53335 3 180 8.83E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0636 7fb12bd1b74e8cbb08e7a9d1cf27a8e7 236 Pfam PF05175 Methyltransferase small domain 5 149 6.4E-11 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Atu0636 7fb12bd1b74e8cbb08e7a9d1cf27a8e7 236 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 97 103 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu0063 42c8be8cfe7bfac9c6511f38d806b25c 340 Gene3D G3DSA:3.40.50.2300 32 297 9.2E-69 T 14-10-2018 Atu0063 42c8be8cfe7bfac9c6511f38d806b25c 340 Gene3D G3DSA:3.40.50.2300 132 279 9.2E-69 T 14-10-2018 Atu0063 42c8be8cfe7bfac9c6511f38d806b25c 340 Pfam PF13407 Periplasmic binding protein domain 31 300 2.1E-44 T 14-10-2018 IPR025997 Periplasmic binding protein Atu0063 42c8be8cfe7bfac9c6511f38d806b25c 340 SUPERFAMILY SSF53822 12 324 2.9E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu2301 ada9b1bb79ae96a30439cb411ed9a908 223 Pfam PF09976 Tetratricopeptide repeat-like domain 23 216 1.1E-18 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Atu2301 ada9b1bb79ae96a30439cb411ed9a908 223 Gene3D G3DSA:1.25.40.10 43 218 2.5E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2301 ada9b1bb79ae96a30439cb411ed9a908 223 SUPERFAMILY SSF48452 102 196 4.81E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2517 b449f8bd0f7eefbbd51111be82c45875 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 339 9.1E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2517 b449f8bd0f7eefbbd51111be82c45875 339 SUPERFAMILY SSF161098 99 323 1.47E-13 T 14-10-2018 IPR035906 MetI-like superfamily Atu2085 a95f220cb05420fa920204d5f1851ee7 318 SUPERFAMILY SSF54211 140 285 7.59E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu2085 a95f220cb05420fa920204d5f1851ee7 318 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 9 282 7.1E-98 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atu2085 a95f220cb05420fa920204d5f1851ee7 318 SUPERFAMILY SSF54211 8 129 1.06E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Atu2085 a95f220cb05420fa920204d5f1851ee7 318 Gene3D G3DSA:3.30.1700.10 135 309 2.4E-54 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atu2085 a95f220cb05420fa920204d5f1851ee7 318 Gene3D G3DSA:3.30.230.20 7 134 5.2E-44 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atu2085 a95f220cb05420fa920204d5f1851ee7 318 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 7 286 40.515 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atu2085 a95f220cb05420fa920204d5f1851ee7 318 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 9 294 7.0E-92 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Atu0407 1386b3687b4782642ad65aa09c2914f0 338 Gene3D G3DSA:3.40.190.10 121 331 4.5E-117 T 14-10-2018 Atu0407 1386b3687b4782642ad65aa09c2914f0 338 Pfam PF13343 Bacterial extracellular solute-binding protein 73 300 3.1E-21 T 14-10-2018 Atu0407 1386b3687b4782642ad65aa09c2914f0 338 PIRSF PIRSF002825 3 338 6.8E-77 T 14-10-2018 IPR026045 Ferric binding protein Atu0407 1386b3687b4782642ad65aa09c2914f0 338 Gene3D G3DSA:3.40.190.10 28 298 4.5E-117 T 14-10-2018 Atu0407 1386b3687b4782642ad65aa09c2914f0 338 SUPERFAMILY SSF53850 25 335 3.26E-72 T 14-10-2018 Atu0025 29a37b8a7e9cfa302413d6d52c7b900c 245 Pfam PF12804 MobA-like NTP transferase domain 6 117 2.8E-16 T 14-10-2018 IPR025877 MobA-like NTP transferase Atu0025 29a37b8a7e9cfa302413d6d52c7b900c 245 Gene3D G3DSA:3.90.550.10 5 244 9.1E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0025 29a37b8a7e9cfa302413d6d52c7b900c 245 SUPERFAMILY SSF53448 5 237 4.96E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4201 8d16450a61b8e62a0926bd8a6874b119 193 Pfam PF03358 NADPH-dependent FMN reductase 50 105 6.6E-9 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Atu4201 8d16450a61b8e62a0926bd8a6874b119 193 ProSitePatterns PS00201 Flavodoxin signature. 11 27 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Atu4201 8d16450a61b8e62a0926bd8a6874b119 193 Gene3D G3DSA:3.40.50.360 1 193 1.1E-66 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu4201 8d16450a61b8e62a0926bd8a6874b119 193 SUPERFAMILY SSF52218 8 187 5.63E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Atu1617 5b95d63af2c01d7c5508fb36082805bd 310 Gene3D G3DSA:3.40.50.1820 65 310 1.4E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1617 5b95d63af2c01d7c5508fb36082805bd 310 Pfam PF07859 alpha/beta hydrolase fold 98 283 1.0E-8 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Atu1617 5b95d63af2c01d7c5508fb36082805bd 310 SUPERFAMILY SSF53474 66 307 2.8E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu6130 5699ef43fe5c467322b4456a15a67da6 209 Pfam PF06871 TraH_2 1 206 1.3E-111 T 14-10-2018 IPR010680 TraH-2 Atu6130 5699ef43fe5c467322b4456a15a67da6 209 ProDom PD019155 PLASMID TRAH Y4DP RIORF115 DTR CONJUGAL TRANSFER TIORF112 SYSTEM PROTEIN 1 206 2.0E-115 T 14-10-2018 Atu3516 81736196da4e0f247a33ac906e304ce7 137 Gene3D G3DSA:3.90.79.10 4 137 5.6E-42 T 14-10-2018 Atu3516 81736196da4e0f247a33ac906e304ce7 137 SUPERFAMILY SSF55811 6 134 6.23E-41 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu3516 81736196da4e0f247a33ac906e304ce7 137 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Atu3516 81736196da4e0f247a33ac906e304ce7 137 PRINTS PR00502 NUDIX hydrolase family signature 38 52 4.1E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu3516 81736196da4e0f247a33ac906e304ce7 137 PRINTS PR00502 NUDIX hydrolase family signature 52 67 4.1E-9 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Atu3516 81736196da4e0f247a33ac906e304ce7 137 TIGRFAM TIGR00586 mutt: mutator mutT protein 6 133 1.4E-29 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Atu3516 81736196da4e0f247a33ac906e304ce7 137 Pfam PF14815 NUDIX domain 13 129 1.2E-22 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Atu2648 6bcb045247e9d1bb4d81bf36cb857a69 147 Pfam PF01878 EVE domain 3 136 6.7E-42 T 14-10-2018 IPR002740 EVE domain Atu2648 6bcb045247e9d1bb4d81bf36cb857a69 147 SUPERFAMILY SSF88697 3 142 2.98E-53 T 14-10-2018 IPR015947 PUA-like superfamily Atu2648 6bcb045247e9d1bb4d81bf36cb857a69 147 Gene3D G3DSA:3.10.590.10 1 147 7.5E-60 T 14-10-2018 Atu1696 1d2bc1b64ac4a2711de3809bea9a01d4 322 Pfam PF00892 EamA-like transporter family 149 278 2.3E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1696 1d2bc1b64ac4a2711de3809bea9a01d4 322 Pfam PF00892 EamA-like transporter family 8 140 5.3E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1696 1d2bc1b64ac4a2711de3809bea9a01d4 322 SUPERFAMILY SSF103481 49 144 6.93E-13 T 14-10-2018 Atu1696 1d2bc1b64ac4a2711de3809bea9a01d4 322 SUPERFAMILY SSF103481 190 285 2.75E-11 T 14-10-2018 Atu4400 a16aea401c197533fbd8efc28f2477c1 717 Pfam PF00593 TonB dependent receptor 293 715 1.2E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Atu4400 a16aea401c197533fbd8efc28f2477c1 717 SUPERFAMILY SSF56935 23 717 1.08E-96 T 14-10-2018 Atu4400 a16aea401c197533fbd8efc28f2477c1 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 168 1.7E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain Atu4400 a16aea401c197533fbd8efc28f2477c1 717 Gene3D G3DSA:2.170.130.10 37 172 3.4E-13 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Atu2271 79b47ded9f8865bfaf60e8912878678b 196 Pfam PF04955 HupE / UreJ protein 12 192 2.7E-58 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein Atu2271 79b47ded9f8865bfaf60e8912878678b 196 PIRSF PIRSF016919 1 196 6.8E-63 T 14-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein Atu5342 bff6b8e3bd03e985237b5ebce579b339 295 Pfam PF05853 beta-keto acid cleavage enzyme 5 292 1.9E-100 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Atu5342 bff6b8e3bd03e985237b5ebce579b339 295 Gene3D G3DSA:3.20.20.70 2 294 1.5E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3715 244252b6ad7c70c2ddee4b180d8d445b 384 Gene3D G3DSA:3.30.1150.10 264 383 3.3E-17 T 14-10-2018 Atu4537 35b031f7d5531a3b5965c176f8ecdcc4 222 SUPERFAMILY SSF161098 16 202 1.44E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu4537 35b031f7d5531a3b5965c176f8ecdcc4 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 214 5.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4537 35b031f7d5531a3b5965c176f8ecdcc4 222 Gene3D G3DSA:1.10.3720.10 3 216 4.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily Atu4537 35b031f7d5531a3b5965c176f8ecdcc4 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 3.0E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu0515 471b42e22c8795d4d88961c28a4f2d28 99 Pfam PF13466 STAS domain 11 88 2.0E-14 T 14-10-2018 IPR002645 STAS domain Atu0515 471b42e22c8795d4d88961c28a4f2d28 99 SUPERFAMILY SSF52091 10 88 1.2E-5 T 14-10-2018 IPR036513 STAS domain superfamily Atu0515 471b42e22c8795d4d88961c28a4f2d28 99 Gene3D G3DSA:3.30.750.24 3 97 9.4E-7 T 14-10-2018 IPR036513 STAS domain superfamily Atu2364 f1bb797d37ca16d46c7e8cd1a482d844 240 SUPERFAMILY SSF161098 20 234 1.83E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu2364 f1bb797d37ca16d46c7e8cd1a482d844 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 127 4.6E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu2364 f1bb797d37ca16d46c7e8cd1a482d844 240 Gene3D G3DSA:1.10.3720.10 18 237 1.3E-47 T 14-10-2018 IPR035906 MetI-like superfamily Atu2364 f1bb797d37ca16d46c7e8cd1a482d844 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 234 2.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0420 5e1a3445a4a701cf823899fd4d4259c5 344 Gene3D G3DSA:3.40.190.10 27 310 4.0E-53 T 14-10-2018 Atu0420 5e1a3445a4a701cf823899fd4d4259c5 344 Gene3D G3DSA:3.40.190.10 112 283 4.0E-53 T 14-10-2018 Atu0420 5e1a3445a4a701cf823899fd4d4259c5 344 Pfam PF12849 PBP superfamily domain 19 310 1.1E-46 T 14-10-2018 IPR024370 PBP domain Atu0420 5e1a3445a4a701cf823899fd4d4259c5 344 SUPERFAMILY SSF53850 19 338 9.31E-68 T 14-10-2018 Atu5053 678d5f9d169947d0a70a0c401afff830 99 Pfam PF06169 Protein of unknown function (DUF982) 8 78 2.3E-20 T 14-10-2018 IPR010385 Protein of unknown function DUF982 Atu0675 565d75955a71de3fd2a30890e63ccfcb 75 SUPERFAMILY SSF47598 4 44 8.65E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Atu0675 565d75955a71de3fd2a30890e63ccfcb 75 Pfam PF01402 Ribbon-helix-helix protein, copG family 7 41 4.2E-8 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Atu4051 9a807cef452b17dadba93b63a46d36b6 326 SUPERFAMILY SSF53448 8 229 7.16E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4051 9a807cef452b17dadba93b63a46d36b6 326 Pfam PF00535 Glycosyl transferase family 2 11 176 9.1E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Atu4051 9a807cef452b17dadba93b63a46d36b6 326 Gene3D G3DSA:3.90.550.10 1 261 4.4E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu6057 7176375150ea89b5161504798bc81488 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 288 6.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6057 7176375150ea89b5161504798bc81488 313 Gene3D G3DSA:1.10.3720.10 112 301 3.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu6057 7176375150ea89b5161504798bc81488 313 SUPERFAMILY SSF161098 110 291 2.22E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu2112 fe248fe54306937d234939e756b00b98 179 Pfam PF01464 Transglycosylase SLT domain 63 161 3.8E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Atu2112 fe248fe54306937d234939e756b00b98 179 SUPERFAMILY SSF53955 56 176 4.22E-34 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Atu2112 fe248fe54306937d234939e756b00b98 179 Gene3D G3DSA:1.10.530.10 49 176 1.3E-30 T 14-10-2018 Atu1475 9962c7d7f616ba5f341cf4b91740c2e3 129 Pfam PF01042 Endoribonuclease L-PSP 13 127 5.0E-30 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Atu1475 9962c7d7f616ba5f341cf4b91740c2e3 129 Gene3D G3DSA:3.30.1330.40 1 129 1.0E-43 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu1475 9962c7d7f616ba5f341cf4b91740c2e3 129 SUPERFAMILY SSF55298 7 129 1.88E-37 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu5292 3073edf848e3f5094757106f6dca2d94 120 Pfam PF12823 Domain of unknown function (DUF3817) 19 107 6.6E-16 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane Atu5292 3073edf848e3f5094757106f6dca2d94 120 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 23 104 3.8E-19 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane Atu3027 595f624f674b9cc05c558e560862691f 331 SUPERFAMILY SSF51735 104 292 1.38E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3027 595f624f674b9cc05c558e560862691f 331 Gene3D G3DSA:3.40.50.720 9 312 2.5E-86 T 14-10-2018 Atu3027 595f624f674b9cc05c558e560862691f 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Atu3027 595f624f674b9cc05c558e560862691f 331 SUPERFAMILY SSF52283 13 122 2.68E-7 T 14-10-2018 Atu3027 595f624f674b9cc05c558e560862691f 331 Gene3D G3DSA:3.40.50.720 100 290 2.5E-86 T 14-10-2018 Atu3027 595f624f674b9cc05c558e560862691f 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 124 291 3.0E-46 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Atu4360 0e262b75dfe7c492328679cf2ad093ef 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 290 5.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4360 0e262b75dfe7c492328679cf2ad093ef 300 SUPERFAMILY SSF161098 60 288 7.72E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu4360 0e262b75dfe7c492328679cf2ad093ef 300 Gene3D G3DSA:1.10.3720.10 56 298 8.7E-62 T 14-10-2018 IPR035906 MetI-like superfamily Atu8118 ef4ae766c876bf50546c521e5c701af3 163 SUPERFAMILY SSF52402 14 124 1.59E-12 T 14-10-2018 Atu8118 ef4ae766c876bf50546c521e5c701af3 163 Gene3D G3DSA:3.40.50.620 12 151 8.6E-14 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu8118 ef4ae766c876bf50546c521e5c701af3 163 Pfam PF00582 Universal stress protein family 13 149 2.3E-15 T 14-10-2018 IPR006016 UspA Atu0391 19b8f504ce4649e4a77d0221020787f8 343 SMART SM00382 2 192 0.0015 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0391 19b8f504ce4649e4a77d0221020787f8 343 ProSitePatterns PS00211 ABC transporters family signature. 115 129 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Atu0391 19b8f504ce4649e4a77d0221020787f8 343 Gene3D G3DSA:2.40.50.140 261 318 2.1E-17 T 14-10-2018 Atu0391 19b8f504ce4649e4a77d0221020787f8 343 SUPERFAMILY SSF52540 2 224 1.33E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0391 19b8f504ce4649e4a77d0221020787f8 343 Gene3D G3DSA:3.40.50.300 1 202 2.4E-56 T 14-10-2018 Atu0391 19b8f504ce4649e4a77d0221020787f8 343 Gene3D G3DSA:2.40.50.940 203 327 2.1E-17 T 14-10-2018 Atu0391 19b8f504ce4649e4a77d0221020787f8 343 Pfam PF00005 ABC transporter 2 142 3.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu0391 19b8f504ce4649e4a77d0221020787f8 343 SUPERFAMILY SSF50331 217 333 6.8E-14 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Atu5110 dd1c5e84022dbadbaf37150193f9572c 95 Pfam PF07820 TraC-like protein 4 91 2.0E-37 T 14-10-2018 IPR012930 TraC-like GO:0000746 Atu1418 2e77e827d4230c6ce0beb5f1f374c97e 306 SUPERFAMILY SSF51730 26 295 7.26E-45 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Atu1418 2e77e827d4230c6ce0beb5f1f374c97e 306 Gene3D G3DSA:3.20.20.220 18 298 1.7E-21 T 14-10-2018 Atu3758 bdd87d034da1e760794c6b6c618ca13c 85 Hamap MF_00797 UPF0335 protein . 7 84 20.959 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 Atu3758 bdd87d034da1e760794c6b6c618ca13c 85 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 12 83 2.4E-33 T 14-10-2018 IPR018753 Azospirillum phage Cd, Gp10 Atu1764 71af64069145d58a767db08c8afe4a48 306 Gene3D G3DSA:3.20.20.220 34 286 1.0E-23 T 14-10-2018 Atu1764 71af64069145d58a767db08c8afe4a48 306 Pfam PF02219 Methylenetetrahydrofolate reductase 130 224 1.7E-4 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Atu1764 71af64069145d58a767db08c8afe4a48 306 SUPERFAMILY SSF51730 18 285 5.89E-38 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Atu2609 0bcead738f59d921d934197e8c2e428f 308 Gene3D G3DSA:3.30.420.40 5 294 3.1E-68 T 14-10-2018 Atu2609 0bcead738f59d921d934197e8c2e428f 308 Gene3D G3DSA:3.30.420.40 116 287 3.1E-68 T 14-10-2018 Atu2609 0bcead738f59d921d934197e8c2e428f 308 Pfam PF00480 ROK family 3 296 9.3E-50 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Atu2609 0bcead738f59d921d934197e8c2e428f 308 SUPERFAMILY SSF53067 1 300 6.11E-49 T 14-10-2018 Atu3541 c811434304377d49a9d2a599aa7f9915 200 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 50 200 1.8E-44 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Atu3541 c811434304377d49a9d2a599aa7f9915 200 Gene3D G3DSA:3.10.620.30 74 199 1.7E-19 T 14-10-2018 Atu2038 094f6e17f73357a88ee49fb478a1dfb7 668 SUPERFAMILY SSF52540 140 518 4.47E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu2038 094f6e17f73357a88ee49fb478a1dfb7 668 Pfam PF01935 Domain of unknown function DUF87 148 387 1.1E-45 T 14-10-2018 IPR002789 Helicase HerA, central domain Atu2038 094f6e17f73357a88ee49fb478a1dfb7 668 Gene3D G3DSA:3.40.50.300 132 237 2.8E-12 T 14-10-2018 Atu2038 094f6e17f73357a88ee49fb478a1dfb7 668 Gene3D G3DSA:3.40.50.300 330 526 6.2E-42 T 14-10-2018 Atu0355 6623230440422734bd2411b71b3ef517 264 Pfam PF01553 Acyltransferase 53 182 3.2E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atu0355 6623230440422734bd2411b71b3ef517 264 SUPERFAMILY SSF69593 11 255 3.01E-27 T 14-10-2018 Atu0355 6623230440422734bd2411b71b3ef517 264 SMART SM00563 66 185 2.4E-28 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atu6009 6d9d4d2d84d40c2d1c47d7749088eb10 221 Pfam PF02027 RolB/RolC glucosidase family 4 199 6.5E-55 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu0765 d50157bf9c5d8a05d15b4c5b4a155fec 471 Pfam PF01523 Putative modulator of DNA gyrase 31 321 2.3E-61 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Atu0765 d50157bf9c5d8a05d15b4c5b4a155fec 471 SUPERFAMILY SSF111283 18 469 2.75E-127 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Atu0765 d50157bf9c5d8a05d15b4c5b4a155fec 471 PIRSF PIRSF004919 11 470 4.6E-136 T 14-10-2018 IPR025502 TldD Atu0765 d50157bf9c5d8a05d15b4c5b4a155fec 471 Gene3D G3DSA:3.30.2290.10 9 229 4.8E-12 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Atu3513 993e5598b0c5e6bc6b9e9525ce66a266 293 Pfam PF08241 Methyltransferase domain 56 137 2.2E-7 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu3513 993e5598b0c5e6bc6b9e9525ce66a266 293 Gene3D G3DSA:3.40.50.150 31 259 3.2E-14 T 14-10-2018 Atu3513 993e5598b0c5e6bc6b9e9525ce66a266 293 SUPERFAMILY SSF53335 33 216 1.07E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2584 98e8c0f731091621100d94e4dccc5878 247 SUPERFAMILY SSF88713 24 227 2.06E-13 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu2584 98e8c0f731091621100d94e4dccc5878 247 Gene3D G3DSA:3.20.20.370 7 246 1.9E-11 T 14-10-2018 Atu1539 5e7787ac7f5dca7165c7ebcb8d1ce3d7 537 Gene3D G3DSA:3.30.750.24 398 532 4.2E-18 T 14-10-2018 IPR036513 STAS domain superfamily Atu1539 5e7787ac7f5dca7165c7ebcb8d1ce3d7 537 SUPERFAMILY SSF52091 423 530 7.85E-11 T 14-10-2018 IPR036513 STAS domain superfamily Atu1539 5e7787ac7f5dca7165c7ebcb8d1ce3d7 537 Pfam PF00916 Sulfate permease family 7 360 2.2E-61 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Atu1539 5e7787ac7f5dca7165c7ebcb8d1ce3d7 537 Pfam PF01740 STAS domain 420 519 1.5E-8 T 14-10-2018 IPR002645 STAS domain Atu0807 28a9ed38ee85396b02bf93fd649acdec 302 Gene3D G3DSA:3.60.15.10 15 220 7.9E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu0807 28a9ed38ee85396b02bf93fd649acdec 302 Gene3D G3DSA:1.10.10.10 227 295 5.2E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0807 28a9ed38ee85396b02bf93fd649acdec 302 Pfam PF00753 Metallo-beta-lactamase superfamily 37 215 2.1E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu0807 28a9ed38ee85396b02bf93fd649acdec 302 SUPERFAMILY SSF56281 17 288 1.26E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu0807 28a9ed38ee85396b02bf93fd649acdec 302 SMART SM00849 39 215 3.7E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3517 20fd98dc36cdba1c41fd349daf5a10ca 258 SUPERFAMILY SSF55729 77 252 2.4E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu3517 20fd98dc36cdba1c41fd349daf5a10ca 258 Pfam PF00583 Acetyltransferase (GNAT) family 159 243 2.0E-13 T 14-10-2018 IPR000182 GNAT domain Atu3517 20fd98dc36cdba1c41fd349daf5a10ca 258 Gene3D G3DSA:3.40.630.30 15 256 1.6E-21 T 14-10-2018 Atu2760 fd7a6cb71d2840214a58ac26a1451858 224 SUPERFAMILY SSF89392 53 215 5.1E-30 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Atu2760 fd7a6cb71d2840214a58ac26a1451858 224 Gene3D G3DSA:2.50.20.10 49 220 1.1E-23 T 14-10-2018 Atu2760 fd7a6cb71d2840214a58ac26a1451858 224 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 61 215 3.9E-44 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Atu4148 a6f7a2437859685699a76c576ba9c673 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 5.3E-50 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu4148 a6f7a2437859685699a76c576ba9c673 339 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-22 T 14-10-2018 Atu4148 a6f7a2437859685699a76c576ba9c673 339 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.2E-22 T 14-10-2018 Atu4148 a6f7a2437859685699a76c576ba9c673 339 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 1.2E-22 T 14-10-2018 Atu4148 a6f7a2437859685699a76c576ba9c673 339 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 1.2E-22 T 14-10-2018 Atu4148 a6f7a2437859685699a76c576ba9c673 339 Gene3D G3DSA:3.40.50.720 4 317 8.0E-91 T 14-10-2018 Atu4148 a6f7a2437859685699a76c576ba9c673 339 SUPERFAMILY SSF51735 1 332 7.82E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4148 a6f7a2437859685699a76c576ba9c673 339 Gene3D G3DSA:3.90.25.10 180 329 8.0E-91 T 14-10-2018 Atu2507 ab56622148e3e1cff5b61cd61efa8464 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 266 1.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2507 ab56622148e3e1cff5b61cd61efa8464 278 Gene3D G3DSA:1.10.3720.10 4 264 6.2E-60 T 14-10-2018 IPR035906 MetI-like superfamily Atu2507 ab56622148e3e1cff5b61cd61efa8464 278 SUPERFAMILY SSF161098 8 277 6.15E-68 T 14-10-2018 IPR035906 MetI-like superfamily Atu0887 4a8e9492c8070f23119a0db382a7f50e 162 Gene3D G3DSA:3.40.630.30 12 160 1.5E-33 T 14-10-2018 Atu0887 4a8e9492c8070f23119a0db382a7f50e 162 Pfam PF00583 Acetyltransferase (GNAT) family 59 147 1.4E-14 T 14-10-2018 IPR000182 GNAT domain Atu0887 4a8e9492c8070f23119a0db382a7f50e 162 SUPERFAMILY SSF55729 15 150 9.29E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu4138 40b52b1f7a7ffcf7b190f7c26a38f912 408 SUPERFAMILY SSF51905 37 400 4.14E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu4138 40b52b1f7a7ffcf7b190f7c26a38f912 408 Pfam PF01266 FAD dependent oxidoreductase 39 392 7.1E-44 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Atu4138 40b52b1f7a7ffcf7b190f7c26a38f912 408 Gene3D G3DSA:3.30.9.10 132 353 1.8E-54 T 14-10-2018 Atu4138 40b52b1f7a7ffcf7b190f7c26a38f912 408 Gene3D G3DSA:3.50.50.60 39 394 1.8E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu0671 4d08d34b3fdc89a5c1c2a7a0ab01401f 305 Pfam PF03601 Conserved hypothetical protein 698 7 284 9.5E-67 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Atu5063 428aa72438a92eb475ac28ac406f64db 292 Gene3D G3DSA:1.10.10.10 6 84 2.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu5063 428aa72438a92eb475ac28ac406f64db 292 SUPERFAMILY SSF46689 11 83 2.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu5063 428aa72438a92eb475ac28ac406f64db 292 Pfam PF01380 SIS domain 138 242 1.9E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Atu5063 428aa72438a92eb475ac28ac406f64db 292 SUPERFAMILY SSF53697 110 267 5.12E-19 T 14-10-2018 Atu5063 428aa72438a92eb475ac28ac406f64db 292 Gene3D G3DSA:3.40.50.10490 104 286 7.7E-24 T 14-10-2018 Atu5063 428aa72438a92eb475ac28ac406f64db 292 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 81 8.1E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Atu3746 662029b53986e7e93ba2209301234e40 261 Gene3D G3DSA:3.30.1330.60 95 261 7.2E-48 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu3746 662029b53986e7e93ba2209301234e40 261 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 221 240 7.6E-5 T 14-10-2018 Atu3746 662029b53986e7e93ba2209301234e40 261 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 203 220 7.6E-5 T 14-10-2018 Atu3746 662029b53986e7e93ba2209301234e40 261 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 241 261 7.6E-5 T 14-10-2018 Atu3746 662029b53986e7e93ba2209301234e40 261 Pfam PF00691 OmpA family 146 252 2.3E-19 T 14-10-2018 IPR006665 OmpA-like domain Atu3746 662029b53986e7e93ba2209301234e40 261 SUPERFAMILY SSF103088 128 257 4.45E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily Atu1056 b1c772e0128058337b4b580c0544dff8 145 Pfam PF09539 Protein of unknown function (DUF2385) 47 143 2.3E-34 T 14-10-2018 IPR012645 Conserved hypothetical protein CHP02301 Atu1056 b1c772e0128058337b4b580c0544dff8 145 TIGRFAM TIGR02301 TIGR02301: TIGR02301 family protein 24 143 2.1E-52 T 14-10-2018 IPR012645 Conserved hypothetical protein CHP02301 Atu5196 4d9b93aca4ddb4e2481d45720114617c 238 Gene3D G3DSA:2.40.440.10 67 238 9.8E-37 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu5196 4d9b93aca4ddb4e2481d45720114617c 238 SUPERFAMILY SSF141523 90 232 4.97E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu5196 4d9b93aca4ddb4e2481d45720114617c 238 Pfam PF03734 L,D-transpeptidase catalytic domain 94 231 2.1E-16 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu4165 fd686b2dd0e4c0da76e791491cc837e0 191 Pfam PF05239 PRC-barrel domain 75 152 1.5E-16 T 14-10-2018 IPR027275 PRC-barrel domain Atu4165 fd686b2dd0e4c0da76e791491cc837e0 191 Gene3D G3DSA:2.30.30.240 68 161 2.5E-24 T 14-10-2018 Atu4165 fd686b2dd0e4c0da76e791491cc837e0 191 SUPERFAMILY SSF50346 21 168 6.87E-14 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Atu2003 6f65bcb2b9dd0f724300c7ff71c023ee 141 Pfam PF08818 Domain of unknown function (DU1801) 32 125 2.1E-17 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 Atu2003 6f65bcb2b9dd0f724300c7ff71c023ee 141 SUPERFAMILY SSF159888 19 133 4.05E-16 T 14-10-2018 Atu5107 c28c0a0fdcaff999ccec0974836d587b 103 SUPERFAMILY SSF142921 3 81 8.5E-24 T 14-10-2018 IPR036930 WGR domain superfamily Atu5107 c28c0a0fdcaff999ccec0974836d587b 103 Pfam PF05406 WGR domain 6 81 1.4E-22 T 14-10-2018 IPR008893 WGR domain Atu5107 c28c0a0fdcaff999ccec0974836d587b 103 SMART SM00773 6 84 3.3E-27 T 14-10-2018 IPR008893 WGR domain Atu5107 c28c0a0fdcaff999ccec0974836d587b 103 Gene3D G3DSA:2.20.140.10 2 85 3.9E-8 T 14-10-2018 IPR036930 WGR domain superfamily Atu6143 2b52a0b18c0dc2bc4ff04d8792015698 286 Gene3D G3DSA:1.10.3720.10 75 282 2.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu6143 2b52a0b18c0dc2bc4ff04d8792015698 286 SUPERFAMILY SSF161098 80 267 7.85E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu6143 2b52a0b18c0dc2bc4ff04d8792015698 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 286 2.4E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3648 6c0a21ec4bbd62174358078dc666cc0e 73 Pfam PF06042 Nucleotidyltransferase 18 71 3.7E-14 T 14-10-2018 IPR009267 Putative nucleotidyltransferase Atu2339 14c5e45f03e6998a417d72dfeaa5e0dc 313 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 309 8.4E-90 T 14-10-2018 IPR007296 Domain of unknown function DUF403 Atu3410 03b81bf416870c1cc7b0699af409e16c 316 SUPERFAMILY SSF161098 94 298 2.22E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu3410 03b81bf416870c1cc7b0699af409e16c 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 316 3.9E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3410 03b81bf416870c1cc7b0699af409e16c 316 Gene3D G3DSA:1.10.3720.10 88 309 7.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu6097 89bae03035b3e6ebfc70f87b11d28e24 198 SUPERFAMILY SSF140931 37 196 1.83E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu6097 89bae03035b3e6ebfc70f87b11d28e24 198 Pfam PF02661 Fic/DOC family 60 151 4.1E-17 T 14-10-2018 IPR003812 Fido domain Atu6097 89bae03035b3e6ebfc70f87b11d28e24 198 TIGRFAM TIGR02613 mob_myst_B: mobile mystery protein B 11 197 1.0E-100 T 14-10-2018 IPR013436 Mobile mystery protein B Atu6097 89bae03035b3e6ebfc70f87b11d28e24 198 Gene3D G3DSA:1.10.3290.10 25 198 3.3E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu1250 9a1ef17490a5c28c426d91daad194b7d 144 Pfam PF13380 CoA binding domain 19 137 2.7E-37 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Atu1250 9a1ef17490a5c28c426d91daad194b7d 144 SMART SM00881 15 111 2.1E-19 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Atu1250 9a1ef17490a5c28c426d91daad194b7d 144 Gene3D G3DSA:3.40.50.720 7 144 4.9E-38 T 14-10-2018 Atu1250 9a1ef17490a5c28c426d91daad194b7d 144 SUPERFAMILY SSF51735 10 141 3.82E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5314 ef60f57c40d09e6d020f4f62ea6867cf 361 SUPERFAMILY SSF81345 28 355 1.96E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu5314 ef60f57c40d09e6d020f4f62ea6867cf 361 Gene3D G3DSA:1.10.3470.10 31 360 3.2E-92 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu5314 ef60f57c40d09e6d020f4f62ea6867cf 361 Pfam PF01032 FecCD transport family 45 355 1.0E-89 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Atu1621 6cf43b1fd356a7d11d42b4af4910f722 293 Gene3D G3DSA:3.40.50.1820 95 293 3.3E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1621 6cf43b1fd356a7d11d42b4af4910f722 293 SUPERFAMILY SSF53474 91 279 1.69E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu1621 6cf43b1fd356a7d11d42b4af4910f722 293 Pfam PF01738 Dienelactone hydrolase family 160 275 1.4E-4 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Atu2573 9c2aad2bcec30e70c029c41099047a51 231 Gene3D G3DSA:3.30.930.10 1 230 9.8E-76 T 14-10-2018 Atu2573 9c2aad2bcec30e70c029c41099047a51 231 SUPERFAMILY SSF55681 38 229 5.36E-19 T 14-10-2018 Atu1804 a5b79e44f762e338087264ee1634f0ec 148 Pfam PF02643 Uncharacterized ACR, COG1430 39 140 9.6E-32 T 14-10-2018 IPR003795 Protein of unknown function DUF192 Atu1804 a5b79e44f762e338087264ee1634f0ec 148 Gene3D G3DSA:2.60.120.1140 17 148 2.2E-47 T 14-10-2018 IPR038695 Saro_0823-like superfamily Atu2190 78197bbf362841e059d2399352a36945 345 SUPERFAMILY SSF51735 17 320 1.49E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu2190 78197bbf362841e059d2399352a36945 345 Pfam PF13460 NAD(P)H-binding 21 172 2.9E-14 T 14-10-2018 IPR016040 NAD(P)-binding domain Atu2190 78197bbf362841e059d2399352a36945 345 Gene3D G3DSA:3.40.50.720 17 320 9.0E-37 T 14-10-2018 Atu6112 876af73dff42af2e4ad9d056a167e56c 216 Pfam PF05284 Protein of unknown function (DUF736) 115 212 2.7E-30 T 14-10-2018 IPR007948 Protein of unknown function DUF736 Atu5096 cff38e44309b4c6b8404cd506ef0a50b 257 SUPERFAMILY SSF143081 2 237 1.26E-64 T 14-10-2018 IPR036590 SOS response associated peptidase-like Atu5096 cff38e44309b4c6b8404cd506ef0a50b 257 Gene3D G3DSA:3.90.1680.20 140 223 1.5E-24 T 14-10-2018 Atu5096 cff38e44309b4c6b8404cd506ef0a50b 257 Pfam PF02586 SOS response associated peptidase (SRAP) 10 231 9.7E-16 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) Atu5350 54c234a2a03171175a26f0383946477d 368 Pfam PF02661 Fic/DOC family 113 222 6.3E-19 T 14-10-2018 IPR003812 Fido domain Atu5350 54c234a2a03171175a26f0383946477d 368 SUPERFAMILY SSF140931 98 289 9.16E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu5350 54c234a2a03171175a26f0383946477d 368 Gene3D G3DSA:1.10.3290.10 28 284 5.4E-47 T 14-10-2018 IPR036597 Fido-like domain superfamily Atu5350 54c234a2a03171175a26f0383946477d 368 Pfam PF13776 Domain of unknown function (DUF4172) 3 84 5.6E-26 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 Atu2275 687b7e3f0251f45df67e90a73f79a282 133 SUPERFAMILY SSF54593 20 129 2.06E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu2275 687b7e3f0251f45df67e90a73f79a282 133 Gene3D G3DSA:3.10.180.10 12 132 5.5E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu3086 4564bc32a87737a07446cea8b1eb1343 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 265 1.1E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3086 4564bc32a87737a07446cea8b1eb1343 272 Gene3D G3DSA:1.10.3720.10 2 262 5.6E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu3086 4564bc32a87737a07446cea8b1eb1343 272 SUPERFAMILY SSF161098 6 260 4.3E-45 T 14-10-2018 IPR035906 MetI-like superfamily Atu0536 e942a722f35deca5aee50b0cc3f7e2d4 157 Hamap MF_00678 UPF0262 protein . 5 156 40.722 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 Atu0536 e942a722f35deca5aee50b0cc3f7e2d4 157 Pfam PF06793 Uncharacterised protein family (UPF0262) 7 156 1.1E-72 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 Atu0536 e942a722f35deca5aee50b0cc3f7e2d4 157 PIRSF PIRSF032146 1 157 2.8E-84 T 14-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 Atu2171 a69fbab24fcb07b0c2a5c36b12492a76 504 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 141 152 7.9E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Atu2171 a69fbab24fcb07b0c2a5c36b12492a76 504 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 117 7.9E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Atu2171 a69fbab24fcb07b0c2a5c36b12492a76 504 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 220 234 7.9E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Atu2171 a69fbab24fcb07b0c2a5c36b12492a76 504 SUPERFAMILY SSF53474 104 473 1.36E-19 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2171 a69fbab24fcb07b0c2a5c36b12492a76 504 Pfam PF00561 alpha/beta hydrolase fold 107 477 8.8E-32 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu5481 26be680635cc5be5a87a0f24250820cd 242 Gene3D G3DSA:1.10.3720.10 5 218 6.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu5481 26be680635cc5be5a87a0f24250820cd 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 1.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5481 26be680635cc5be5a87a0f24250820cd 242 SUPERFAMILY SSF161098 13 200 2.88E-43 T 14-10-2018 IPR035906 MetI-like superfamily Atu5481 26be680635cc5be5a87a0f24250820cd 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 3.1E-31 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4812 e9f3866a217f0809692f333d40c1ada7 232 Pfam PF02698 DUF218 domain 74 177 1.8E-20 T 14-10-2018 IPR003848 Domain of unknown function DUF218 Atu0017 08fce046de89bbc7f96347fb0a67dcd0 220 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 213 37.777 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Atu0017 08fce046de89bbc7f96347fb0a67dcd0 220 SUPERFAMILY SSF51366 5 210 2.35E-58 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Atu0017 08fce046de89bbc7f96347fb0a67dcd0 220 Gene3D G3DSA:3.20.20.70 3 211 1.1E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu0017 08fce046de89bbc7f96347fb0a67dcd0 220 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 208 2.4E-44 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Atu0065 911c8d897bb07baa340d5cbf4cb176de 260 SUPERFAMILY SSF52540 4 237 3.74E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu0065 911c8d897bb07baa340d5cbf4cb176de 260 SMART SM00382 31 236 8.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu0065 911c8d897bb07baa340d5cbf4cb176de 260 Gene3D G3DSA:3.40.50.300 1 253 2.0E-54 T 14-10-2018 Atu0065 911c8d897bb07baa340d5cbf4cb176de 260 Pfam PF00005 ABC transporter 22 180 5.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu8120 916e335029ae4569fad3b76d6a602e3b 80 Pfam PF06169 Protein of unknown function (DUF982) 8 75 5.2E-20 T 14-10-2018 IPR010385 Protein of unknown function DUF982 Atu4688 1f7e53009922fe18ffc5313fd3420637 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 111 1.2E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu4688 1f7e53009922fe18ffc5313fd3420637 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 212 9.8E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4688 1f7e53009922fe18ffc5313fd3420637 234 SUPERFAMILY SSF161098 15 206 2.94E-39 T 14-10-2018 IPR035906 MetI-like superfamily Atu4688 1f7e53009922fe18ffc5313fd3420637 234 Gene3D G3DSA:1.10.3720.10 3 219 3.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu0068 58abb4310e6538127436ce52f015eacd 73 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 71 1.9E-30 T 14-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 Atu0068 58abb4310e6538127436ce52f015eacd 73 Gene3D G3DSA:3.40.30.10 1 73 3.4E-26 T 14-10-2018 Atu0068 58abb4310e6538127436ce52f015eacd 73 SUPERFAMILY SSF52833 1 69 5.54E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Atu0068 58abb4310e6538127436ce52f015eacd 73 Pfam PF00462 Glutaredoxin 3 61 8.2E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Atu0780 db7ebdc35557705e05c467b1b0ec8b56 282 Pfam PF11412 Disulphide bond corrector protein DsbC 52 156 3.0E-15 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Atu0940 1ff22bac9a587bea6b24ebae316e3a26 119 SUPERFAMILY SSF50118 4 116 5.23E-24 T 14-10-2018 Atu0940 1ff22bac9a587bea6b24ebae316e3a26 119 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 8 115 4.5E-22 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Atu0940 1ff22bac9a587bea6b24ebae316e3a26 119 Gene3D G3DSA:2.30.30.110 8 117 3.4E-28 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Atu1529 d4732fa4d316e680460658af140fa87d 166 Pfam PF05751 FixH 13 149 5.8E-40 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH Atu1529 d4732fa4d316e680460658af140fa87d 166 PIRSF PIRSF011386 3 163 1.3E-65 T 14-10-2018 IPR018037 Nitrogen fixation protein FixH, Proteobacterial Atu3013 ae224b1f008214afbb5887f7e08b0895 134 SUPERFAMILY SSF88723 3 127 1.96E-18 T 14-10-2018 IPR029060 PIN-like domain superfamily Atu3013 ae224b1f008214afbb5887f7e08b0895 134 Gene3D G3DSA:3.40.50.1010 1 128 1.1E-12 T 14-10-2018 Atu3013 ae224b1f008214afbb5887f7e08b0895 134 Pfam PF01850 PIN domain 3 116 1.6E-10 T 14-10-2018 IPR002716 PIN domain Atu4468 3a9a3d2d4a2938c61cf17567b4febda3 284 SUPERFAMILY SSF81345 6 268 2.22E-35 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4468 3a9a3d2d4a2938c61cf17567b4febda3 284 Gene3D G3DSA:1.10.3470.10 41 276 6.3E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4468 3a9a3d2d4a2938c61cf17567b4febda3 284 Pfam PF00950 ABC 3 transport family 14 267 5.4E-76 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Atu3805 63bdab8c95d5a00c68e4745880e20439 315 Pfam PF03690 Uncharacterised protein family (UPF0160) 6 300 1.9E-70 T 14-10-2018 IPR003226 Metal-dependent protein hydrolase Atu5334 a7304291a33c292828f9d3d19a2984a3 421 Pfam PF13660 Domain of unknown function (DUF4147) 11 231 2.2E-78 T 14-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Atu5334 a7304291a33c292828f9d3d19a2984a3 421 Pfam PF05161 MOFRL family 309 414 1.6E-34 T 14-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Atu5334 a7304291a33c292828f9d3d19a2984a3 421 SUPERFAMILY SSF82544 6 420 1.2E-145 T 14-10-2018 Atu5334 a7304291a33c292828f9d3d19a2984a3 421 Gene3D G3DSA:3.40.50.10180 35 253 6.1E-134 T 14-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Atu5334 a7304291a33c292828f9d3d19a2984a3 421 Gene3D G3DSA:3.40.1480.10 254 415 6.1E-134 T 14-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Atu1404 b4aa87f7972dbba0a94a35af840f5260 405 Gene3D G3DSA:3.40.190.10 34 403 5.5E-61 T 14-10-2018 Atu1404 b4aa87f7972dbba0a94a35af840f5260 405 Pfam PF01547 Bacterial extracellular solute-binding protein 46 318 9.0E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu1404 b4aa87f7972dbba0a94a35af840f5260 405 SUPERFAMILY SSF53850 30 398 2.92E-66 T 14-10-2018 Atu3441 3bc4961b8178a0cd48174aaea670f328 450 PIRSF PIRSF000337 4 445 4.0E-166 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3441 3bc4961b8178a0cd48174aaea670f328 450 SUPERFAMILY SSF51679 6 436 4.32E-132 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu3441 3bc4961b8178a0cd48174aaea670f328 450 Pfam PF00296 Luciferase-like monooxygenase 22 386 2.8E-60 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu3441 3bc4961b8178a0cd48174aaea670f328 450 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 430 7.8E-177 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 Atu3441 3bc4961b8178a0cd48174aaea670f328 450 Gene3D G3DSA:3.20.20.30 1 449 8.7E-158 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu2041 278faf249d1c58203698bdc765efc8e5 187 Pfam PF13302 Acetyltransferase (GNAT) domain 8 150 2.1E-28 T 14-10-2018 IPR000182 GNAT domain Atu2041 278faf249d1c58203698bdc765efc8e5 187 SUPERFAMILY SSF55729 1 153 7.36E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu2041 278faf249d1c58203698bdc765efc8e5 187 Gene3D G3DSA:3.40.630.30 2 163 1.1E-35 T 14-10-2018 Atu3173 a845fe35d9634a70a5b64e657316d1db 294 SUPERFAMILY SSF161098 57 281 6.67E-61 T 14-10-2018 IPR035906 MetI-like superfamily Atu3173 a845fe35d9634a70a5b64e657316d1db 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 290 1.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3173 a845fe35d9634a70a5b64e657316d1db 294 Gene3D G3DSA:1.10.3720.10 49 293 1.8E-69 T 14-10-2018 IPR035906 MetI-like superfamily Atu2021 908fd8fed3240f46f38417e4f77aef64 301 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 180 1.3E-44 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Atu2021 908fd8fed3240f46f38417e4f77aef64 301 Gene3D G3DSA:1.10.10.60 188 296 4.2E-26 T 14-10-2018 Atu2021 908fd8fed3240f46f38417e4f77aef64 301 Pfam PF12833 Helix-turn-helix domain 215 290 3.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu2021 908fd8fed3240f46f38417e4f77aef64 301 SUPERFAMILY SSF46689 245 290 8.06E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2021 908fd8fed3240f46f38417e4f77aef64 301 SUPERFAMILY SSF46689 192 243 2.12E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu2021 908fd8fed3240f46f38417e4f77aef64 301 SMART SM00342 209 292 8.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Atu1730 524d7abad1195ad975867552d371390d 281 SUPERFAMILY SSF52402 1 146 5.78E-9 T 14-10-2018 Atu1730 524d7abad1195ad975867552d371390d 281 Pfam PF00582 Universal stress protein family 155 279 9.8E-7 T 14-10-2018 IPR006016 UspA Atu1730 524d7abad1195ad975867552d371390d 281 SUPERFAMILY SSF52402 153 273 2.93E-16 T 14-10-2018 Atu1730 524d7abad1195ad975867552d371390d 281 Gene3D G3DSA:3.40.50.12370 5 281 1.3E-28 T 14-10-2018 Atu1730 524d7abad1195ad975867552d371390d 281 PRINTS PR01438 Universal stress protein signature 241 253 8.9E-6 T 14-10-2018 IPR006015 Universal stress protein A Atu1730 524d7abad1195ad975867552d371390d 281 PRINTS PR01438 Universal stress protein signature 259 281 8.9E-6 T 14-10-2018 IPR006015 Universal stress protein A Atu1730 524d7abad1195ad975867552d371390d 281 PRINTS PR01438 Universal stress protein signature 155 173 8.9E-6 T 14-10-2018 IPR006015 Universal stress protein A Atu1897 b32e586deb8906f4b485ffed23750afc 262 SUPERFAMILY SSF51735 12 261 4.16E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1897 b32e586deb8906f4b485ffed23750afc 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 259 2.3E-61 T 14-10-2018 Atu1897 b32e586deb8906f4b485ffed23750afc 262 Gene3D G3DSA:3.40.50.720 2 261 2.8E-75 T 14-10-2018 Atu1897 b32e586deb8906f4b485ffed23750afc 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 6.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 6.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 6.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 6.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 6.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 6.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 6.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 6.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu1897 b32e586deb8906f4b485ffed23750afc 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 6.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Atu3991 44dfe62af1b1f77ec69308fd0769f35b 449 Pfam PF07731 Multicopper oxidase 215 330 3.4E-21 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Atu3991 44dfe62af1b1f77ec69308fd0769f35b 449 Gene3D G3DSA:2.60.40.420 50 339 1.8E-68 T 14-10-2018 IPR008972 Cupredoxin Atu3991 44dfe62af1b1f77ec69308fd0769f35b 449 SUPERFAMILY SSF49503 164 326 1.75E-33 T 14-10-2018 IPR008972 Cupredoxin Atu3991 44dfe62af1b1f77ec69308fd0769f35b 449 Pfam PF07732 Multicopper oxidase 81 191 3.0E-36 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Atu3991 44dfe62af1b1f77ec69308fd0769f35b 449 ProSitePatterns PS00080 Multicopper oxidases signature 2. 315 326 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 Atu3991 44dfe62af1b1f77ec69308fd0769f35b 449 SUPERFAMILY SSF49503 60 193 1.75E-37 T 14-10-2018 IPR008972 Cupredoxin Atu3616 9d19f351e31532ea14096255b7a0a368 257 Pfam PF11306 Protein of unknown function (DUF3108) 20 255 2.3E-29 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 Atu4878 3750f7eebeb1cabd2c4b4910eaa470d3 137 SUPERFAMILY SSF54427 7 135 4.79E-29 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu4878 3750f7eebeb1cabd2c4b4910eaa470d3 137 Gene3D G3DSA:3.10.450.50 5 136 9.0E-34 T 14-10-2018 Atu4878 3750f7eebeb1cabd2c4b4910eaa470d3 137 Pfam PF12680 SnoaL-like domain 13 119 7.7E-19 T 14-10-2018 IPR037401 SnoaL-like domain Atu0278 5a1cd0ba019a64d605104d4b83ab8116 295 Pfam PF02834 LigT like Phosphoesterase 96 174 2.4E-8 T 14-10-2018 IPR014051 Phosphoesterase, HXTX Atu0278 5a1cd0ba019a64d605104d4b83ab8116 295 SUPERFAMILY SSF55144 94 261 7.85E-19 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Atu0278 5a1cd0ba019a64d605104d4b83ab8116 295 Gene3D G3DSA:3.90.1140.10 89 262 1.5E-19 T 14-10-2018 Atu1531 f07ac2ceece4d4f463b7dc8daf165272 134 Gene3D G3DSA:3.30.530.20 2 134 6.9E-53 T 14-10-2018 IPR023393 START-like domain superfamily Atu1531 f07ac2ceece4d4f463b7dc8daf165272 134 SUPERFAMILY SSF55961 1 133 2.02E-35 T 14-10-2018 Atu1322 0e0c3c33c64f3c92c151de670bb4aa4f 169 Gene3D G3DSA:3.40.630.30 1 163 1.9E-23 T 14-10-2018 Atu1322 0e0c3c33c64f3c92c151de670bb4aa4f 169 SUPERFAMILY SSF55729 2 138 3.26E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1322 0e0c3c33c64f3c92c151de670bb4aa4f 169 Pfam PF00583 Acetyltransferase (GNAT) family 45 131 2.1E-13 T 14-10-2018 IPR000182 GNAT domain Atu2375 57bdbab651649caabd16cf64741ba8de 266 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 74 243 8.0E-53 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Atu2375 57bdbab651649caabd16cf64741ba8de 266 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 70 247 2.1E-37 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Atu1242 0c58498ae6590fd63cefde04beb52806 372 Hamap MF_01665 Heme A synthase [ctaA]. 28 361 25.902 T 14-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Atu1242 0c58498ae6590fd63cefde04beb52806 372 Pfam PF02628 Cytochrome oxidase assembly protein 32 351 6.6E-117 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Atu4078 d87b04e2209cc306406517650e85f1a0 820 SUPERFAMILY SSF53756 19 819 0.0 T 14-10-2018 Atu4078 d87b04e2209cc306406517650e85f1a0 820 Gene3D G3DSA:3.40.50.2000 487 813 0.0 T 14-10-2018 Atu4078 d87b04e2209cc306406517650e85f1a0 820 Gene3D G3DSA:3.40.50.2000 30 819 0.0 T 14-10-2018 Atu4078 d87b04e2209cc306406517650e85f1a0 820 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 21 819 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atu4078 d87b04e2209cc306406517650e85f1a0 820 Pfam PF00343 Carbohydrate phosphorylase 109 819 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atu4078 d87b04e2209cc306406517650e85f1a0 820 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 665 677 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atu4078 d87b04e2209cc306406517650e85f1a0 820 PIRSF PIRSF000460 9 820 3.6E-224 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Atu4037 e05995b2ced67c14f2e180c74a0fff61 409 Pfam PF07995 Glucose / Sorbosone dehydrogenase 73 397 9.3E-126 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Atu4037 e05995b2ced67c14f2e180c74a0fff61 409 SUPERFAMILY SSF50952 57 396 9.81E-43 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Atu4037 e05995b2ced67c14f2e180c74a0fff61 409 Gene3D G3DSA:2.120.10.30 56 407 1.8E-107 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu4338 c763c14e1876f632908bed59ae1639b8 169 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 17 162 8.5E-33 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein Atu4338 c763c14e1876f632908bed59ae1639b8 169 Pfam PF04965 Gene 25-like lysozyme 44 142 1.9E-13 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Atu4338 c763c14e1876f632908bed59ae1639b8 169 SUPERFAMILY SSF160719 49 156 6.41E-5 T 14-10-2018 Atu0374 246234c848bd6ff7e8d976b221b0576b 314 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 305 5.8E-96 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Atu0374 246234c848bd6ff7e8d976b221b0576b 314 SUPERFAMILY SSF53590 4 312 1.7E-106 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Atu0374 246234c848bd6ff7e8d976b221b0576b 314 Gene3D G3DSA:3.90.245.10 1 313 4.2E-115 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Atu2436 8e717e8930016a367024150c8e79f69f 305 SUPERFAMILY SSF53474 20 300 2.34E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2436 8e717e8930016a367024150c8e79f69f 305 PIRSF PIRSF031982 1 305 1.2E-97 T 14-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL Atu2436 8e717e8930016a367024150c8e79f69f 305 Pfam PF12146 Serine aminopeptidase, S33 37 140 1.5E-8 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu3505 05ab68509318232271d83b458a781041 350 SUPERFAMILY SSF52096 5 323 1.47E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu3505 05ab68509318232271d83b458a781041 350 Gene3D G3DSA:3.90.226.40 1 346 2.6E-127 T 14-10-2018 Atu3505 05ab68509318232271d83b458a781041 350 Pfam PF16113 Enoyl-CoA hydratase/isomerase 14 337 3.8E-124 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 Atu2406 664172e40d6dfba12f5d00139ff3d04a 85 Pfam PF06906 Protein of unknown function (DUF1272) 2 58 4.3E-30 T 14-10-2018 IPR010696 Protein of unknown function DUF1272 Atu0571 1391eef44e61528a788a6fd047ba618b 449 Gene3D G3DSA:3.30.750.140 279 407 1.9E-7 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Atu0571 1391eef44e61528a788a6fd047ba618b 449 Pfam PF02120 Flagellar hook-length control protein FliK 306 380 1.5E-16 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Atu3142 0be666aa7bb989231c1e38486571339f 274 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 4 274 55.124 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Atu3142 0be666aa7bb989231c1e38486571339f 274 Pfam PF04962 KduI/IolB family 34 262 2.2E-26 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Atu3142 0be666aa7bb989231c1e38486571339f 274 PIRSF PIRSF006625 4 274 5.2E-128 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Atu3142 0be666aa7bb989231c1e38486571339f 274 SUPERFAMILY SSF51182 5 258 7.13E-97 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu3142 0be666aa7bb989231c1e38486571339f 274 Gene3D G3DSA:2.60.120.520 33 140 2.6E-108 T 14-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Atu3142 0be666aa7bb989231c1e38486571339f 274 Gene3D G3DSA:2.60.120.10 13 259 2.6E-108 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu6169 3db23ca1223ee8dbdc249122539f5ead 108 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 7 89 3.7E-18 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Atu0851 b15524a0b62ec5fbde5540a45dafd4ff 140 SUPERFAMILY SSF54909 1 118 4.08E-33 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Atu0851 b15524a0b62ec5fbde5540a45dafd4ff 140 Gene3D G3DSA:3.30.70.1060 1 118 7.3E-28 T 14-10-2018 Atu0851 b15524a0b62ec5fbde5540a45dafd4ff 140 Pfam PF03795 YCII-related domain 1 115 1.5E-18 T 14-10-2018 IPR005545 YCII-related Atu3459 12a297f943562b69f54d92d9a32e5a93 340 SUPERFAMILY SSF161098 97 325 1.7E-15 T 14-10-2018 IPR035906 MetI-like superfamily Atu3459 12a297f943562b69f54d92d9a32e5a93 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 340 5.8E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3459 12a297f943562b69f54d92d9a32e5a93 340 Gene3D G3DSA:1.10.3720.10 89 340 9.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu0158 39c22e9d57b7ac3260105a3eb57ce034 257 SUPERFAMILY SSF161098 58 242 4.06E-28 T 14-10-2018 IPR035906 MetI-like superfamily Atu0158 39c22e9d57b7ac3260105a3eb57ce034 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 251 8.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0158 39c22e9d57b7ac3260105a3eb57ce034 257 Gene3D G3DSA:1.10.3720.10 58 251 2.4E-20 T 14-10-2018 IPR035906 MetI-like superfamily Atu3861 593827f01b8174c0377043b2b0783021 129 Pfam PF03061 Thioesterase superfamily 26 95 1.8E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Atu3861 593827f01b8174c0377043b2b0783021 129 SUPERFAMILY SSF54637 8 127 1.8E-37 T 14-10-2018 IPR029069 HotDog domain superfamily Atu3861 593827f01b8174c0377043b2b0783021 129 Gene3D G3DSA:3.10.129.10 1 129 1.3E-37 T 14-10-2018 Atu5352 039022f00eb4c81812e7912fb76a49af 502 Pfam PF01526 Tn3 transposase DDE domain 91 477 4.5E-141 T 14-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 Atu1248 5a919fb452ea1f0aa0cd3e5e677edd59 278 SUPERFAMILY SSF103481 39 134 2.75E-11 T 14-10-2018 Atu1248 5a919fb452ea1f0aa0cd3e5e677edd59 278 Pfam PF00892 EamA-like transporter family 140 275 8.8E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu1248 5a919fb452ea1f0aa0cd3e5e677edd59 278 SUPERFAMILY SSF103481 179 277 3.14E-12 T 14-10-2018 Atu3098 9dcbe2db806e2d8e8d7563863670f9d9 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 289 2.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3098 9dcbe2db806e2d8e8d7563863670f9d9 294 Gene3D G3DSA:1.10.3720.10 2 287 3.4E-44 T 14-10-2018 IPR035906 MetI-like superfamily Atu3098 9dcbe2db806e2d8e8d7563863670f9d9 294 SUPERFAMILY SSF161098 5 292 1.53E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu5098 9c93cb49a364da541cdbcf41e8c77b6c 250 PIRSF PIRSF034285 1 250 2.2E-86 T 14-10-2018 IPR017026 Inducible mutagenesis protein A Atu5098 9c93cb49a364da541cdbcf41e8c77b6c 250 SUPERFAMILY SSF52540 48 165 2.55E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu5098 9c93cb49a364da541cdbcf41e8c77b6c 250 Gene3D G3DSA:3.40.50.300 50 164 6.7E-16 T 14-10-2018 Atu8166 f6bd8129425aefc5311745b65f79edd2 89 Pfam PF06169 Protein of unknown function (DUF982) 16 86 5.5E-21 T 14-10-2018 IPR010385 Protein of unknown function DUF982 Atu1316 30b9d201975b38f249c5252ee27d001f 159 SMART SM00732 17 117 4.1E-35 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Atu1316 30b9d201975b38f249c5252ee27d001f 159 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 23.459 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Atu1316 30b9d201975b38f249c5252ee27d001f 159 SUPERFAMILY SSF53098 18 151 2.28E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Atu1316 30b9d201975b38f249c5252ee27d001f 159 Pfam PF03652 Holliday junction resolvase 18 149 6.4E-39 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Atu1316 30b9d201975b38f249c5252ee27d001f 159 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 21 149 1.4E-31 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Atu1316 30b9d201975b38f249c5252ee27d001f 159 Gene3D G3DSA:3.30.420.140 16 157 4.2E-42 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Atu1005 488dc571917dacfdf04b1af65a3581f0 76 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 48 7.6E-19 T 14-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB Atu0711 e10ccb3043d7b669d491690faec26d0d 639 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 20 639 33.151 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup Atu0711 e10ccb3043d7b669d491690faec26d0d 639 Pfam PF02705 K+ potassium transporter 29 561 2.6E-205 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 Atu1933 899eabd52cc52bb17858d0213d75ce40 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.193 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Atu1933 899eabd52cc52bb17858d0213d75ce40 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Atu1933 899eabd52cc52bb17858d0213d75ce40 101 SUPERFAMILY SSF57716 2 101 2.07E-34 T 14-10-2018 Atu1933 899eabd52cc52bb17858d0213d75ce40 101 Gene3D G3DSA:4.10.830.10 41 101 2.8E-21 T 14-10-2018 Atu1933 899eabd52cc52bb17858d0213d75ce40 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.4E-22 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Atu3821 31b82434a7a1143c6cb5f0b6d07da5f0 309 Gene3D G3DSA:3.40.50.2300 29 295 1.8E-63 T 14-10-2018 Atu3821 31b82434a7a1143c6cb5f0b6d07da5f0 309 Gene3D G3DSA:3.40.50.2300 128 302 1.8E-63 T 14-10-2018 Atu3821 31b82434a7a1143c6cb5f0b6d07da5f0 309 Pfam PF13407 Periplasmic binding protein domain 28 285 1.1E-50 T 14-10-2018 IPR025997 Periplasmic binding protein Atu3821 31b82434a7a1143c6cb5f0b6d07da5f0 309 SUPERFAMILY SSF53822 23 304 3.7E-67 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu5475 d49ce7d965b2f85ca48f39271fba9890 137 Gene3D G3DSA:3.10.180.10 1 134 1.0E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu5475 d49ce7d965b2f85ca48f39271fba9890 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 2.7E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Atu5475 d49ce7d965b2f85ca48f39271fba9890 137 SUPERFAMILY SSF54593 2 129 5.23E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Atu1477 af90426e6ddfbb3a59d9567e5cf01c6a 229 Pfam PF07077 Protein of unknown function (DUF1345) 48 218 2.2E-49 T 14-10-2018 IPR009781 Protein of unknown function DUF1345 Atu3085 eade946537666c7da032a0d8c018675b 247 Gene3D G3DSA:3.40.50.12500 1 243 2.1E-82 T 14-10-2018 Atu3085 eade946537666c7da032a0d8c018675b 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 53 209 6.7E-12 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Atu0863 6560b495d0a8d5afba3923ae00ca7751 143 Pfam PF01638 HxlR-like helix-turn-helix 37 123 1.1E-23 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Atu0863 6560b495d0a8d5afba3923ae00ca7751 143 Gene3D G3DSA:1.10.10.10 22 137 3.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0863 6560b495d0a8d5afba3923ae00ca7751 143 SUPERFAMILY SSF46785 31 133 8.56E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu3575 f88dfed18434fc5c7643cc271849f8c0 437 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 426 9.4E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1393 698cb77cab3acd12165651b2cb59bd0d 809 Pfam PF13567 Domain of unknown function (DUF4131) 80 233 8.7E-10 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 Atu1393 698cb77cab3acd12165651b2cb59bd0d 809 Pfam PF03772 Competence protein 283 571 2.2E-51 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Atu1393 698cb77cab3acd12165651b2cb59bd0d 809 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 302 503 4.9E-18 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Atu0217 6974ee58ae253931e67a1a430affcfb3 334 Gene3D G3DSA:1.20.81.30 156 269 6.3E-10 T 14-10-2018 Atu0217 6974ee58ae253931e67a1a430affcfb3 334 Pfam PF00482 Type II secretion system (T2SS), protein F 167 291 2.2E-20 T 14-10-2018 IPR018076 Type II secretion system F domain Atu3962 369c84e11e990e91b56ec1634de24f1a 269 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 2 234 5.2E-53 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Atu3962 369c84e11e990e91b56ec1634de24f1a 269 SUPERFAMILY SSF63829 2 267 5.45E-50 T 14-10-2018 Atu3962 369c84e11e990e91b56ec1634de24f1a 269 Gene3D G3DSA:2.120.10.30 1 269 1.2E-66 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Atu3962 369c84e11e990e91b56ec1634de24f1a 269 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 110 132 3.5E-15 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu3962 369c84e11e990e91b56ec1634de24f1a 269 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 173 190 3.5E-15 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu3962 369c84e11e990e91b56ec1634de24f1a 269 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 67 88 3.5E-15 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu3962 369c84e11e990e91b56ec1634de24f1a 269 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 216 234 3.5E-15 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Atu1659 27c64d2bd856a6d5d1196306b8aff49a 216 Pfam PF06210 Protein of unknown function (DUF1003) 101 190 3.2E-35 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 Atu2574 543c8ced65abd5102f87d8b27b741e3d 215 Pfam PF08893 Domain of unknown function (DUF1839) 1 204 7.8E-77 T 14-10-2018 IPR014989 Protein of unknown function DUF1839 Atu0108 28caf79267e5db4824d8b2f8fff56ec0 463 Pfam PF07687 Peptidase dimerisation domain 202 361 6.5E-24 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Atu0108 28caf79267e5db4824d8b2f8fff56ec0 463 SUPERFAMILY SSF53187 7 461 2.1E-64 T 14-10-2018 Atu0108 28caf79267e5db4824d8b2f8fff56ec0 463 Gene3D G3DSA:3.30.70.360 210 380 4.7E-149 T 14-10-2018 Atu0108 28caf79267e5db4824d8b2f8fff56ec0 463 Gene3D G3DSA:3.40.630.10 20 453 4.7E-149 T 14-10-2018 Atu0108 28caf79267e5db4824d8b2f8fff56ec0 463 Pfam PF01546 Peptidase family M20/M25/M40 85 458 2.9E-39 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Atu1608 014ff3123453591f52fbdbddd7fb853c 140 Pfam PF07811 TadE-like protein 13 55 8.9E-13 T 14-10-2018 IPR012495 TadE-like Atu1643 17c31a461223a2b1f985b9f924aaf07e 145 Pfam PF05232 Chlorhexidine efflux transporter 72 134 1.8E-24 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter Atu1643 17c31a461223a2b1f985b9f924aaf07e 145 Pfam PF05232 Chlorhexidine efflux transporter 2 65 6.4E-24 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter Atu3968 fe49020e2ad8304f939329001490d778 322 Gene3D G3DSA:1.10.3720.10 90 321 5.3E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu3968 fe49020e2ad8304f939329001490d778 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 8.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3968 fe49020e2ad8304f939329001490d778 322 SUPERFAMILY SSF161098 92 310 2.62E-59 T 14-10-2018 IPR035906 MetI-like superfamily Atu2462 6bb8f9fd38f440a557a09fc42a09212b 174 SUPERFAMILY SSF144064 4 171 4.45E-48 T 14-10-2018 Atu2462 6bb8f9fd38f440a557a09fc42a09212b 174 Gene3D G3DSA:3.40.1570.10 1 174 1.1E-68 T 14-10-2018 Atu2462 6bb8f9fd38f440a557a09fc42a09212b 174 PIRSF PIRSF030840 1 174 3.5E-86 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like Atu2462 6bb8f9fd38f440a557a09fc42a09212b 174 Pfam PF06228 Haem utilisation ChuX/HutX 32 168 3.9E-29 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like Atu2462 6bb8f9fd38f440a557a09fc42a09212b 174 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 19 168 4.1E-52 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like Atu6111 8306e7441b98f1305a01a4e02e2f257a 304 SUPERFAMILY SSF52402 23 237 1.46E-6 T 14-10-2018 Atu2783 b91a1e0c07a370712c6f05fab8d5271e 210 Gene3D G3DSA:3.40.630.30 7 178 9.4E-43 T 14-10-2018 Atu2783 b91a1e0c07a370712c6f05fab8d5271e 210 Pfam PF13302 Acetyltransferase (GNAT) domain 34 172 1.5E-29 T 14-10-2018 IPR000182 GNAT domain Atu2783 b91a1e0c07a370712c6f05fab8d5271e 210 SUPERFAMILY SSF55729 28 175 1.06E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Atu1142 b9930111dc0ca8305cd57ddd949c68d2 385 Pfam PF01594 AI-2E family transporter 14 343 1.6E-70 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Atu3886 775c38989bf02271a3af26510edb4db9 313 Gene3D G3DSA:3.40.50.1820 13 313 2.7E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3886 775c38989bf02271a3af26510edb4db9 313 SUPERFAMILY SSF53474 16 309 5.74E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3886 775c38989bf02271a3af26510edb4db9 313 Pfam PF12146 Serine aminopeptidase, S33 43 296 1.2E-44 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu1694 ccde91b841a636ef55a89ab204becbba 122 Gene3D G3DSA:3.30.2020.30 1 98 2.6E-26 T 14-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Atu1694 ccde91b841a636ef55a89ab204becbba 122 Pfam PF06155 Protein of unknown function (DUF971) 11 92 5.7E-27 T 14-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Atu2201 2cb5ccff5b3ab06cff129812374a8b8b 214 SUPERFAMILY SSF56281 11 212 1.35E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2201 2cb5ccff5b3ab06cff129812374a8b8b 214 Pfam PF00753 Metallo-beta-lactamase superfamily 13 195 4.8E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu2201 2cb5ccff5b3ab06cff129812374a8b8b 214 Gene3D G3DSA:3.60.15.10 5 213 6.3E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Atu2201 2cb5ccff5b3ab06cff129812374a8b8b 214 SMART SM00849 15 195 2.4E-34 T 14-10-2018 IPR001279 Metallo-beta-lactamase Atu3615 a4750a791607f2a1886163e9ce249cdb 142 Gene3D G3DSA:2.60.120.10 1 142 6.3E-67 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Atu3615 a4750a791607f2a1886163e9ce249cdb 142 Pfam PF06172 Cupin superfamily (DUF985) 4 131 9.4E-48 T 14-10-2018 IPR009327 Cupin domain of unknown function DUF985 Atu3615 a4750a791607f2a1886163e9ce249cdb 142 SUPERFAMILY SSF51182 1 137 1.25E-54 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Atu0398 673cd5b66ef16e7348cac242e24a5582 345 Gene3D G3DSA:3.10.310.10 7 333 1.4E-121 T 14-10-2018 Atu0398 673cd5b66ef16e7348cac242e24a5582 345 Gene3D G3DSA:3.10.310.10 148 311 1.4E-121 T 14-10-2018 Atu0398 673cd5b66ef16e7348cac242e24a5582 345 SUPERFAMILY SSF54506 1 332 8.01E-99 T 14-10-2018 Atu0398 673cd5b66ef16e7348cac242e24a5582 345 PIRSF PIRSF029792 1 335 2.5E-125 T 14-10-2018 IPR008794 Proline racemase family Atu0398 673cd5b66ef16e7348cac242e24a5582 345 Pfam PF05544 Proline racemase 10 332 1.2E-129 T 14-10-2018 IPR008794 Proline racemase family Atu3174 07b054a954ca99d249cbb4c8dacec394 419 Gene3D G3DSA:3.40.190.10 20 415 2.1E-78 T 14-10-2018 Atu3174 07b054a954ca99d249cbb4c8dacec394 419 Pfam PF01547 Bacterial extracellular solute-binding protein 34 324 1.2E-44 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu3174 07b054a954ca99d249cbb4c8dacec394 419 SUPERFAMILY SSF53850 21 411 1.14E-85 T 14-10-2018 Atu5367 7b21b707368fbd61267bb3b4276e91a8 114 Pfam PF05717 IS66 Orf2 like protein 7 103 8.0E-32 T 14-10-2018 IPR008878 Transposase IS66, Orf2 Atu1004 606fa2fdb81fd6805438828e75cbfa33 129 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 128 11.669 T 14-10-2018 IPR022907 VapC family GO:0004540 Atu1004 606fa2fdb81fd6805438828e75cbfa33 129 Pfam PF01850 PIN domain 2 120 4.6E-11 T 14-10-2018 IPR002716 PIN domain Atu1004 606fa2fdb81fd6805438828e75cbfa33 129 Gene3D G3DSA:3.40.50.1010 1 128 5.1E-29 T 14-10-2018 Atu1004 606fa2fdb81fd6805438828e75cbfa33 129 SUPERFAMILY SSF88723 1 120 1.09E-18 T 14-10-2018 IPR029060 PIN-like domain superfamily Atu5109 3e0488f316572119950b34a9b857589f 77 Pfam PF06412 Conjugal transfer protein TraD 4 61 3.5E-18 T 14-10-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 Atu3609 0586755024b61e95f4a60cb766d2a693 265 Pfam PF01553 Acyltransferase 59 183 1.1E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atu3609 0586755024b61e95f4a60cb766d2a693 265 SMART SM00563 72 186 3.8E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Atu3609 0586755024b61e95f4a60cb766d2a693 265 SUPERFAMILY SSF69593 8 218 9.02E-35 T 14-10-2018 Atu0649 75f63c90270a326e5977c1a561f4d357 418 PIRSF PIRSF003085 1 403 3.1E-125 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Atu0649 75f63c90270a326e5977c1a561f4d357 418 Gene3D G3DSA:3.40.50.150 120 389 7.1E-93 T 14-10-2018 Atu0649 75f63c90270a326e5977c1a561f4d357 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 116 380 1.2E-87 T 14-10-2018 Atu0649 75f63c90270a326e5977c1a561f4d357 418 SUPERFAMILY SSF53335 122 384 9.43E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu3835 8f7410bfbb164a82d7e1e29d2ec10450 261 TIGRFAM TIGR04255 sporadTIGR04255: TIGR04255 family protein 8 253 1.8E-28 T 14-10-2018 IPR026349 Conserved hypothetical protein CHP04255 Atu4124 eaa9c026473a1d7d2b7ababf2f5e5d7d 268 SUPERFAMILY SSF52540 23 264 9.4E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu4124 eaa9c026473a1d7d2b7ababf2f5e5d7d 268 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 264 5.7E-7 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Atu4124 eaa9c026473a1d7d2b7ababf2f5e5d7d 268 Pfam PF00005 ABC transporter 39 195 1.1E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Atu4124 eaa9c026473a1d7d2b7ababf2f5e5d7d 268 SMART SM00382 48 257 8.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Atu4124 eaa9c026473a1d7d2b7ababf2f5e5d7d 268 Gene3D G3DSA:3.40.50.300 21 267 1.3E-55 T 14-10-2018 Atu2505 26525c8b3e64be2d60020a884c317378 443 SUPERFAMILY SSF53850 41 434 7.61E-61 T 14-10-2018 Atu2505 26525c8b3e64be2d60020a884c317378 443 Gene3D G3DSA:3.40.190.10 164 430 4.7E-84 T 14-10-2018 Atu2505 26525c8b3e64be2d60020a884c317378 443 Pfam PF01547 Bacterial extracellular solute-binding protein 56 348 4.9E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu2505 26525c8b3e64be2d60020a884c317378 443 Gene3D G3DSA:3.40.190.10 58 392 4.7E-84 T 14-10-2018 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 195 213 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 169 187 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 65 80 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 PRINTS PR01010 Flagellar P-ring protein signature 261 273 1.6E-93 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 Pfam PF02119 Flagellar P-ring protein 30 371 1.0E-132 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu0550 282ea784a5b906dfe6c035eadc7376a1 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 10 373 37.541 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Atu4371 9c911dae474993d6778ea0c5919a0299 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 305 1.0E-28 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu4456 18f4959ee2f1131113a808a33e9f32f3 245 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 9 214 9.0E-23 T 14-10-2018 Atu3550 c0f9979274c450c072963ecfd3c91a9d 492 Pfam PF13440 Polysaccharide biosynthesis protein 35 324 7.7E-63 T 14-10-2018 Atu3879 f9f7a09829f8af6b6ef49059adbbb2fb 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 322 2.8E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu4876 5854015c235f74ebe248ea25f4ac85d7 353 Pfam PF00248 Aldo/keto reductase family 16 320 7.4E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu4876 5854015c235f74ebe248ea25f4ac85d7 353 Gene3D G3DSA:3.20.20.100 1 341 1.9E-124 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu4876 5854015c235f74ebe248ea25f4ac85d7 353 SUPERFAMILY SSF51430 1 319 1.23E-101 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu1628 5c40801d9cedf79f62a3f85d830193c0 118 Gene3D G3DSA:3.30.530.20 4 112 3.5E-7 T 14-10-2018 IPR023393 START-like domain superfamily Atu1628 5c40801d9cedf79f62a3f85d830193c0 118 SUPERFAMILY SSF55961 10 96 3.25E-11 T 14-10-2018 Atu2799 d3ac9f1857b562908a03920e33ace5a0 260 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 4 228 5.8E-40 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Atu2799 d3ac9f1857b562908a03920e33ace5a0 260 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 5 245 2.5E-65 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Atu3101 6b33d5b40f3311485f7f4a40d7d37f59 292 Gene3D G3DSA:1.10.3720.10 49 290 8.1E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu3101 6b33d5b40f3311485f7f4a40d7d37f59 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 282 7.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3101 6b33d5b40f3311485f7f4a40d7d37f59 292 SUPERFAMILY SSF161098 53 281 6.28E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu1702 1cca2e43850d576fc24d6ce4dc11a63f 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 238 8.1E-65 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atu1702 1cca2e43850d576fc24d6ce4dc11a63f 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 255 36.038 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atu1702 1cca2e43850d576fc24d6ce4dc11a63f 256 Pfam PF01975 Survival protein SurE 3 184 9.2E-54 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atu1702 1cca2e43850d576fc24d6ce4dc11a63f 256 SUPERFAMILY SSF64167 1 249 4.97E-79 T 14-10-2018 Atu1702 1cca2e43850d576fc24d6ce4dc11a63f 256 Gene3D G3DSA:3.40.1210.10 1 255 1.1E-92 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Atu8019 5895db62ac17ec703d4dfed058d10d13 53 Pfam PF08085 Entericidin EcnA/B family 24 43 9.8E-6 T 14-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 Atu0279 a3acde4c20d9e1ceba52530a2cc4108d 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 1.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0279 a3acde4c20d9e1ceba52530a2cc4108d 192 SUPERFAMILY SSF48498 78 190 2.19E-30 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Atu0279 a3acde4c20d9e1ceba52530a2cc4108d 192 SUPERFAMILY SSF46689 5 71 4.99E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Atu0279 a3acde4c20d9e1ceba52530a2cc4108d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0279 a3acde4c20d9e1ceba52530a2cc4108d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Atu0279 a3acde4c20d9e1ceba52530a2cc4108d 192 Gene3D G3DSA:1.10.357.10 1 192 5.8E-82 T 14-10-2018 Atu4720 c0664c783b0852b54f6746542e6e4d04 315 SUPERFAMILY SSF161098 91 297 2.35E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu4720 c0664c783b0852b54f6746542e6e4d04 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 3.3E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4720 c0664c783b0852b54f6746542e6e4d04 315 Gene3D G3DSA:1.10.3720.10 84 305 2.4E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu0379 bd6ee54c54746c0af4b13064a92b4c27 305 Pfam PF00892 EamA-like transporter family 199 301 1.9E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0379 bd6ee54c54746c0af4b13064a92b4c27 305 Pfam PF00892 EamA-like transporter family 9 140 2.0E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu0379 bd6ee54c54746c0af4b13064a92b4c27 305 SUPERFAMILY SSF103481 210 302 7.32E-12 T 14-10-2018 Atu0379 bd6ee54c54746c0af4b13064a92b4c27 305 SUPERFAMILY SSF103481 45 142 1.1E-7 T 14-10-2018 Atu3496 881e873a61f67fa50b86b9a0eacb03c3 168 SUPERFAMILY SSF56524 46 167 5.1E-15 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Atu2325 18cdef1e2ff9ee16c913b8c5e9f1a40f 120 Pfam PF01934 Protein of unknown function DUF86 18 108 6.7E-22 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Atu4797 4b1034a1f6416a29a9636108d1484e05 270 SUPERFAMILY SSF53448 1 252 1.22E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4797 4b1034a1f6416a29a9636108d1484e05 270 Pfam PF00483 Nucleotidyl transferase 3 200 4.2E-9 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atu4797 4b1034a1f6416a29a9636108d1484e05 270 Gene3D G3DSA:3.90.550.10 1 254 1.3E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0733 06c1ed6112336c343e859940c2d307a1 252 Gene3D G3DSA:3.90.226.10 11 236 2.3E-55 T 14-10-2018 Atu0733 06c1ed6112336c343e859940c2d307a1 252 SUPERFAMILY SSF52096 3 251 2.07E-58 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Atu0733 06c1ed6112336c343e859940c2d307a1 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 249 7.2E-42 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Atu4857 7eb0a60718918cd34b70bb01219eac01 111 ProDom PD029395 PLASMID MOBILIZATION C MOBILITY CONJUGATION MOBC MOBS ORF94 PROBABLE ORF110 16 89 9.0E-37 T 14-10-2018 Atu4346 2659cb8c3a6166adb8bc2e8a94d58b42 129 Gene3D G3DSA:1.10.890.40 54 128 2.0E-22 T 14-10-2018 Atu5087 15f7de85d200c54b608aca3842759b5b 350 Pfam PF07536 HWE histidine kinase 155 237 5.0E-23 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu5087 15f7de85d200c54b608aca3842759b5b 350 SMART SM00911 155 237 4.1E-26 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Atu5087 15f7de85d200c54b608aca3842759b5b 350 Gene3D G3DSA:3.30.565.10 230 340 6.5E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Atu5245 cb8e3b347dc549a590a60c049831c2c2 233 Pfam PF00857 Isochorismatase family 29 223 1.6E-35 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Atu5245 cb8e3b347dc549a590a60c049831c2c2 233 Gene3D G3DSA:3.40.50.850 7 231 3.9E-53 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu5245 cb8e3b347dc549a590a60c049831c2c2 233 SUPERFAMILY SSF52499 9 228 1.01E-51 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Atu1916 d54cedb3a5e780d6d6bf7363cde9516c 116 PIRSF PIRSF037256 2 116 2.8E-58 T 14-10-2018 IPR017160 Uncharacterised conserved protein UCP037256 Atu0049 ca1c501f51d907cb1bb83e2d7d852ca7 161 Gene3D G3DSA:3.40.1350.10 12 158 2.9E-52 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Atu0049 ca1c501f51d907cb1bb83e2d7d852ca7 161 PIRSF PIRSF031796 1 161 2.9E-96 T 14-10-2018 IPR009394 DNA repair protein MmcB-like Atu0049 ca1c501f51d907cb1bb83e2d7d852ca7 161 Pfam PF06319 DNA repair protein MmcB-like 9 154 2.0E-77 T 14-10-2018 IPR009394 DNA repair protein MmcB-like Atu3777 9dbfda06470333721df1e1e4a6d620ce 497 Pfam PF10082 Putative beta-barrel porin 2 125 496 5.8E-109 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 Atu3777 9dbfda06470333721df1e1e4a6d620ce 497 SUPERFAMILY SSF56925 222 369 8.63E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu0942 9d3e12faf57d43db0915d1e2578d6df3 460 Gene3D G3DSA:1.20.1720.10 18 224 7.2E-24 T 14-10-2018 Atu0942 9d3e12faf57d43db0915d1e2578d6df3 460 SUPERFAMILY SSF103473 17 457 1.24E-36 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0942 9d3e12faf57d43db0915d1e2578d6df3 460 Gene3D G3DSA:1.20.1250.20 268 453 1.5E-6 T 14-10-2018 Atu0942 9d3e12faf57d43db0915d1e2578d6df3 460 Pfam PF07690 Major Facilitator Superfamily 25 409 9.4E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu2815 b63706257e1bccd0a67d98ab0097e738 273 Gene3D G3DSA:3.20.20.140 1 273 1.4E-80 T 14-10-2018 Atu2815 b63706257e1bccd0a67d98ab0097e738 273 Pfam PF04909 Amidohydrolase 3 269 6.2E-49 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu2815 b63706257e1bccd0a67d98ab0097e738 273 SUPERFAMILY SSF51556 3 270 1.04E-67 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu3759 dd7448b92cad839e67903c8df339a155 101 Gene3D G3DSA:1.10.3340.10 1 101 2.3E-48 T 14-10-2018 IPR036810 SMc04008-like superfamily Atu3759 dd7448b92cad839e67903c8df339a155 101 SUPERFAMILY SSF158757 5 80 2.09E-38 T 14-10-2018 IPR036810 SMc04008-like superfamily Atu3759 dd7448b92cad839e67903c8df339a155 101 Pfam PF06844 Protein of unknown function (DUF1244) 30 96 1.3E-37 T 14-10-2018 IPR023163 SMc04008-like domain Atu1548 704842a722dcb8a1315b71f1fb723083 788 Gene3D G3DSA:3.40.228.10 205 484 4.3E-63 T 14-10-2018 Atu1548 704842a722dcb8a1315b71f1fb723083 788 Pfam PF00384 Molybdopterin oxidoreductase 132 514 1.3E-20 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu1548 704842a722dcb8a1315b71f1fb723083 788 Pfam PF01568 Molydopterin dinucleotide binding domain 670 776 3.7E-9 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Atu1548 704842a722dcb8a1315b71f1fb723083 788 PIRSF PIRSF000144 17 787 0.0 T 14-10-2018 Atu1548 704842a722dcb8a1315b71f1fb723083 788 SUPERFAMILY SSF53706 70 655 2.62E-140 T 14-10-2018 Atu1548 704842a722dcb8a1315b71f1fb723083 788 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 36 781 1.4E-285 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Atu1548 704842a722dcb8a1315b71f1fb723083 788 SUPERFAMILY SSF50692 666 784 3.84E-16 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Atu8176 8a420e19ab0ee78ea397948fc3c8ccad 85 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 2 77 3.7E-25 T 14-10-2018 IPR014299 Pentapeptide MXKDX repeat protein Atu4756 c28f1304514c7488b023d09c0c922ae2 337 Gene3D G3DSA:3.40.630.10 6 334 5.5E-113 T 14-10-2018 Atu4756 c28f1304514c7488b023d09c0c922ae2 337 SUPERFAMILY SSF53187 9 331 1.19E-56 T 14-10-2018 Atu4756 c28f1304514c7488b023d09c0c922ae2 337 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 7 331 7.3E-193 T 14-10-2018 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB KEGG: 00260+3.5.1.125|MetaCyc: PWY-7855 Atu4756 c28f1304514c7488b023d09c0c922ae2 337 PIRSF PIRSF039012 5 337 3.8E-84 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Atu4756 c28f1304514c7488b023d09c0c922ae2 337 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 52 332 9.7E-83 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Atu1742 9f5ce0fa0d2897d626f32a24801c224a 384 PIRSF PIRSF035865 1 384 2.9E-164 T 14-10-2018 IPR014598 Uncharacterised conserved protein UCP035865 Atu1742 9f5ce0fa0d2897d626f32a24801c224a 384 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 92 339 5.2E-63 T 14-10-2018 IPR019285 Protein of unknown function DUF2336 Atu0446 46baf27ca55bc45e3610cec15ea5ac0f 381 Gene3D G3DSA:3.40.50.150 183 293 3.7E-6 T 14-10-2018 Atu0446 46baf27ca55bc45e3610cec15ea5ac0f 381 SUPERFAMILY SSF53335 184 350 3.5E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu0446 46baf27ca55bc45e3610cec15ea5ac0f 381 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 259 265 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Atu0917 86ee3491b9f0503abe504b55b6c9495b 140 SUPERFAMILY SSF48295 61 127 2.35E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu0917 86ee3491b9f0503abe504b55b6c9495b 140 SMART SM00760 38 107 9.8E-14 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Atu0917 86ee3491b9f0503abe504b55b6c9495b 140 Gene3D G3DSA:1.10.1750.10 33 130 3.0E-15 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu0917 86ee3491b9f0503abe504b55b6c9495b 140 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 51 106 2.1E-11 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Atu1649 2c5d8c144a28f9485ca54335f2f4a7ad 276 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 12 226 1.2E-12 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Atu1649 2c5d8c144a28f9485ca54335f2f4a7ad 276 Gene3D G3DSA:3.60.21.10 8 252 7.6E-20 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu1649 2c5d8c144a28f9485ca54335f2f4a7ad 276 SUPERFAMILY SSF56300 8 247 1.42E-34 T 14-10-2018 Atu4361 b724a93308053f72afd09ed641c05430 410 SUPERFAMILY SSF53850 26 406 1.5E-89 T 14-10-2018 Atu4361 b724a93308053f72afd09ed641c05430 410 Gene3D G3DSA:3.40.190.10 46 368 5.7E-149 T 14-10-2018 Atu4361 b724a93308053f72afd09ed641c05430 410 Pfam PF01547 Bacterial extracellular solute-binding protein 45 324 6.6E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Atu4361 b724a93308053f72afd09ed641c05430 410 Gene3D G3DSA:3.40.190.10 144 399 5.7E-149 T 14-10-2018 Atu1880 74f4e46a17ee4db65b335a2a7f95a0c9 267 Gene3D G3DSA:1.10.3720.10 44 265 1.4E-41 T 14-10-2018 IPR035906 MetI-like superfamily Atu1880 74f4e46a17ee4db65b335a2a7f95a0c9 267 SUPERFAMILY SSF161098 48 261 1.57E-33 T 14-10-2018 IPR035906 MetI-like superfamily Atu1880 74f4e46a17ee4db65b335a2a7f95a0c9 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 251 1.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1880 74f4e46a17ee4db65b335a2a7f95a0c9 267 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 49 153 3.7E-13 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Atu0376 8fd79433b6373251bbd38015db09cedb 85 Pfam PF06620 Protein of unknown function (DUF1150) 10 85 3.7E-31 T 14-10-2018 IPR009531 Protein of unknown function DUF1150 Atu2818 52bebb76d93b0be74d226e60cadd96ed 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 330 4.7E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 Gene3D G3DSA:3.30.9.50 72 264 7.4E-86 T 14-10-2018 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 9.9E-22 T 14-10-2018 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 9.9E-22 T 14-10-2018 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 9.9E-22 T 14-10-2018 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 9.9E-22 T 14-10-2018 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 SUPERFAMILY SSF51905 3 377 6.24E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 Pfam PF01494 FAD binding domain 5 314 2.6E-33 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 Gene3D G3DSA:3.50.50.60 5 316 7.4E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Atu1794 68447dfecbbbe2d2b5b66d0d90d12850 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 379 2.8E-99 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Atu4189 cce48dcc0be5f0eb95ceda9e02bdfdba 298 PIRSF PIRSF001365 7 298 1.6E-49 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4189 cce48dcc0be5f0eb95ceda9e02bdfdba 298 SMART SM01130 9 298 6.2E-47 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4189 cce48dcc0be5f0eb95ceda9e02bdfdba 298 SUPERFAMILY SSF51569 8 297 7.43E-58 T 14-10-2018 Atu4189 cce48dcc0be5f0eb95ceda9e02bdfdba 298 Pfam PF00701 Dihydrodipicolinate synthetase family 10 277 6.3E-35 T 14-10-2018 IPR002220 DapA-like GO:0016829 Atu4189 cce48dcc0be5f0eb95ceda9e02bdfdba 298 Gene3D G3DSA:3.20.20.70 1 298 1.8E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Atu3812 db12a28d3aa99c31a515037b019a7b71 135 Pfam PF04120 Low affinity iron permease 5 116 1.6E-47 T 14-10-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 Atu1784 b81c2d8bd4c820d92a8bacdbf9c963c3 222 Pfam PF04367 Protein of unknown function (DUF502) 70 177 1.2E-32 T 14-10-2018 IPR007462 Protein of unknown function DUF502 Atu1892 23fd05d45e6ec2300184ae559277dc8d 63 Pfam PF06945 Protein of unknown function (DUF1289) 3 49 2.0E-20 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 Atu3542 574a7a5594a9a26b613ab4697470d300 263 Gene3D G3DSA:3.60.21.10 31 261 1.1E-53 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Atu3542 574a7a5594a9a26b613ab4697470d300 263 SUPERFAMILY SSF56300 32 254 5.47E-43 T 14-10-2018 Atu3542 574a7a5594a9a26b613ab4697470d300 263 Pfam PF00149 Calcineurin-like phosphoesterase 34 235 4.8E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Atu3804 61eed8edcdf3b42ee2e7b95b16dfb697 402 SUPERFAMILY SSF103473 16 401 1.07E-55 T 14-10-2018 IPR036259 MFS transporter superfamily Atu3804 61eed8edcdf3b42ee2e7b95b16dfb697 402 Pfam PF07690 Major Facilitator Superfamily 41 349 2.1E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu3804 61eed8edcdf3b42ee2e7b95b16dfb697 402 Gene3D G3DSA:1.20.1250.20 22 399 5.0E-42 T 14-10-2018 Atu6126 91e8bee07636202b302f1e9fc0cc553a 98 Pfam PF07820 TraC-like protein 2 98 2.8E-35 T 14-10-2018 IPR012930 TraC-like GO:0000746 Atu4649 50d6592aae8466adf41639be4ef029a4 297 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Atu4649 50d6592aae8466adf41639be4ef029a4 297 Gene3D G3DSA:3.40.1190.20 3 297 1.2E-57 T 14-10-2018 IPR029056 Ribokinase-like Atu4649 50d6592aae8466adf41639be4ef029a4 297 Pfam PF00294 pfkB family carbohydrate kinase 9 290 2.9E-40 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Atu4649 50d6592aae8466adf41639be4ef029a4 297 SUPERFAMILY SSF53613 7 292 1.71E-54 T 14-10-2018 IPR029056 Ribokinase-like Atu1487 a90cfde8c9b9715730f90b1170877586 188 Pfam PF04264 YceI-like domain 31 184 3.1E-23 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Atu1487 a90cfde8c9b9715730f90b1170877586 188 Gene3D G3DSA:2.40.128.110 30 188 2.5E-31 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Atu1487 a90cfde8c9b9715730f90b1170877586 188 SUPERFAMILY SSF101874 27 188 2.22E-34 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Atu1487 a90cfde8c9b9715730f90b1170877586 188 SMART SM00867 30 187 1.2E-34 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Atu4846 b1f622dfa5052221043e71215092d0de 360 Pfam PF14486 Domain of unknown function (DUF4432) 35 342 1.4E-17 T 14-10-2018 IPR027839 Protein of unknown function DUF4432 Atu4846 b1f622dfa5052221043e71215092d0de 360 Gene3D G3DSA:2.70.98.80 28 360 1.1E-21 T 14-10-2018 Atu4846 b1f622dfa5052221043e71215092d0de 360 SUPERFAMILY SSF74650 38 342 2.67E-11 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Atu2249 301d5ecd5f7bd79b42618179c6162b59 61 Pfam PF06348 Protein of unknown function (DUF1059) 1 56 4.6E-22 T 14-10-2018 IPR009409 Protein of unknown function DUF1059 Atu3778 d7eb9bab75f05ffe28b48befba03b937 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 267 2.0E-104 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Atu3778 d7eb9bab75f05ffe28b48befba03b937 295 SUPERFAMILY SSF53448 7 276 2.93E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3778 d7eb9bab75f05ffe28b48befba03b937 295 Gene3D G3DSA:3.90.550.10 1 291 3.9E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3778 d7eb9bab75f05ffe28b48befba03b937 295 Pfam PF00483 Nucleotidyl transferase 14 268 2.3E-20 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Atu5263 48b4a0333d27e68c19e4eb379b3f24bd 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 284 1.0E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu5263 48b4a0333d27e68c19e4eb379b3f24bd 293 Gene3D G3DSA:1.10.3720.10 3 284 2.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily Atu5263 48b4a0333d27e68c19e4eb379b3f24bd 293 SUPERFAMILY SSF161098 7 293 1.03E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu0148 018dcfc60015a35c0f676037f5a6aa0d 198 Pfam PF07811 TadE-like protein 19 61 2.7E-7 T 14-10-2018 IPR012495 TadE-like Atu0354 429691fc4c1d1edb194c3f4a263bee17 142 SUPERFAMILY SSF46785 8 135 3.63E-38 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0354 429691fc4c1d1edb194c3f4a263bee17 142 Gene3D G3DSA:3.30.1490.190 88 141 4.0E-19 T 14-10-2018 Atu0354 429691fc4c1d1edb194c3f4a263bee17 142 Gene3D G3DSA:1.10.10.10 2 87 1.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0354 429691fc4c1d1edb194c3f4a263bee17 142 Pfam PF01475 Ferric uptake regulator family 14 133 4.9E-43 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Atu5031 3ad1caf3fee074199507ff8caf18f612 372 Pfam PF04471 Restriction endonuclease 8 121 7.2E-5 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Atu8199 693496c36ad09b13f699a259e1ad8d43 115 Pfam PF04972 BON domain 28 77 1.2E-7 T 14-10-2018 IPR007055 BON domain Atu1796 c342460b3a202ec001fd8bb8a8a6e736 214 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 19 191 1.3E-48 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Atu2630 620758a6a7bcee6b17cd53ecd0f9f581 177 Pfam PF11066 Protein of unknown function (DUF2867) 20 152 6.1E-33 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 Atu0773 87722b09331ba6287b15b2e4f1c6379c 244 Pfam PF02104 SURF1 family 17 225 8.4E-38 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu5532 8940fef36f09af27eaafe9ff4c388d50 269 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 1 269 1.8E-96 T 14-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type Atu5532 8940fef36f09af27eaafe9ff4c388d50 269 Pfam PF02653 Branched-chain amino acid transport system / permease component 1 256 4.5E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0881 8063604f4311f61311a0329f9875e1c8 135 PRINTS PR00608 Class II cytochrome C signature 121 132 3.2E-6 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup Atu0881 8063604f4311f61311a0329f9875e1c8 135 PRINTS PR00608 Class II cytochrome C signature 98 121 3.2E-6 T 14-10-2018 IPR015984 Cytochrome c prime, subgroup Atu0881 8063604f4311f61311a0329f9875e1c8 135 PIRSF PIRSF000027 1 134 2.5E-40 T 14-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 Atu0881 8063604f4311f61311a0329f9875e1c8 135 Gene3D G3DSA:1.20.120.10 15 135 5.8E-34 T 14-10-2018 Atu0881 8063604f4311f61311a0329f9875e1c8 135 Pfam PF01322 Cytochrome C' 17 132 8.9E-31 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 Atu0881 8063604f4311f61311a0329f9875e1c8 135 SUPERFAMILY SSF47175 12 134 1.03E-33 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Atu1125 9403895306816cf7e62f9a03199ecf4f 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 286 5.5E-22 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1535 8a7deb3af57df7fbec9e23255afb00ad 50 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 50 1.7E-22 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component Atu3568 5a79a23f5e4e751fa12c1272606cc7de 642 SUPERFAMILY SSF48452 420 573 2.47E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3568 5a79a23f5e4e751fa12c1272606cc7de 642 Pfam PF03704 Bacterial transcriptional activator domain 103 241 1.4E-24 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Atu3568 5a79a23f5e4e751fa12c1272606cc7de 642 SMART SM01043 101 241 4.0E-9 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Atu3568 5a79a23f5e4e751fa12c1272606cc7de 642 Gene3D G3DSA:1.25.40.10 93 266 2.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu3568 5a79a23f5e4e751fa12c1272606cc7de 642 Gene3D G3DSA:1.25.40.10 394 616 6.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu2067 2549fda6f8667fdb6bb220321f099cc3 78 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 73 2.5E-21 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 Atu2444 4aba45275ab5abf4953c983fd42931b1 274 Gene3D G3DSA:3.40.50.150 9 198 7.4E-18 T 14-10-2018 Atu2444 4aba45275ab5abf4953c983fd42931b1 274 SUPERFAMILY SSF53335 44 176 5.76E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu2444 4aba45275ab5abf4953c983fd42931b1 274 Pfam PF13578 Methyltransferase domain 46 162 3.1E-11 T 14-10-2018 Atu4416 8b838a4fadc378541abd7cd941566fc2 238 PRINTS PR01399 Enterobactin synthetase component D signature 165 181 4.6E-20 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Atu4416 8b838a4fadc378541abd7cd941566fc2 238 PRINTS PR01399 Enterobactin synthetase component D signature 60 80 4.6E-20 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Atu4416 8b838a4fadc378541abd7cd941566fc2 238 PRINTS PR01399 Enterobactin synthetase component D signature 90 108 4.6E-20 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 Atu4416 8b838a4fadc378541abd7cd941566fc2 238 SUPERFAMILY SSF56214 123 206 9.03E-12 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atu4416 8b838a4fadc378541abd7cd941566fc2 238 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 124 189 1.0E-8 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 Gene3D G3DSA:3.40.190.10 97 286 1.2E-76 T 14-10-2018 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 296 1.5E-117 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 Gene3D G3DSA:3.40.190.10 164 264 1.2E-76 T 14-10-2018 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 SUPERFAMILY SSF46785 1 108 2.1E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 Gene3D G3DSA:1.10.10.10 1 83 6.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 SUPERFAMILY SSF53850 96 276 2.71E-20 T 14-10-2018 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Atu0928 86c515aa81cafe74c60fa2b83bca0a3b 301 Pfam PF03466 LysR substrate binding domain 92 276 3.0E-14 T 14-10-2018 IPR005119 LysR, substrate-binding Atu0587 7c3235deb4e684eacf68fe3c58dc20bb 224 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 71 219 7.5E-17 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Atu3133 e9b3d017be76f90d79e27ea72231d139 293 SUPERFAMILY SSF161098 49 276 3.01E-57 T 14-10-2018 IPR035906 MetI-like superfamily Atu3133 e9b3d017be76f90d79e27ea72231d139 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 281 1.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3133 e9b3d017be76f90d79e27ea72231d139 293 Gene3D G3DSA:1.10.3720.10 45 286 2.0E-67 T 14-10-2018 IPR035906 MetI-like superfamily Atu4793 be227401e9b9bd24c9748f1bb48ae4eb 419 Gene3D G3DSA:3.30.1950.10 39 109 2.8E-16 T 14-10-2018 Atu4793 be227401e9b9bd24c9748f1bb48ae4eb 419 Pfam PF02563 Polysaccharide biosynthesis/export protein 33 105 2.1E-15 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Atu4793 be227401e9b9bd24c9748f1bb48ae4eb 419 Pfam PF10531 SLBB domain 111 147 2.4E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu4793 be227401e9b9bd24c9748f1bb48ae4eb 419 Gene3D G3DSA:3.10.560.10 28 172 2.8E-16 T 14-10-2018 Atu0335 b66ad0936fbfebed194ce50671794c8b 235 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 59 225 9.5E-7 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Atu0064 a1bd0ceb6e365a9b8b411a553c2307ee 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 78 349 7.0E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu4425 d66dcede61ab553b3a295e0f278e8cbd 306 Gene3D G3DSA:3.90.245.10 2 305 2.5E-69 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Atu4425 d66dcede61ab553b3a295e0f278e8cbd 306 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 291 8.2E-56 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Atu4425 d66dcede61ab553b3a295e0f278e8cbd 306 SUPERFAMILY SSF53590 2 302 5.23E-65 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like Atu1667 3f770588bb1839b58e3e3e750b2072b2 77 Pfam PF06568 Domain of unknown function (DUF1127) 32 68 2.3E-15 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 Atu3522 5fb4fe3800dba1fda9feeced2202c281 400 Pfam PF01757 Acyltransferase family 10 363 3.9E-34 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu2303 cbdc1105a7da82d142149cf12ad0e097 327 SUPERFAMILY SSF88713 22 320 7.23E-31 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu2303 cbdc1105a7da82d142149cf12ad0e097 327 Gene3D G3DSA:3.20.20.370 90 324 7.0E-30 T 14-10-2018 Atu2303 cbdc1105a7da82d142149cf12ad0e097 327 Pfam PF01522 Polysaccharide deacetylase 24 192 1.5E-5 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atu3894 b0aa7dc3263b6730d9e947b09086df12 288 Gene3D G3DSA:1.10.3720.10 46 285 7.9E-51 T 14-10-2018 IPR035906 MetI-like superfamily Atu3894 b0aa7dc3263b6730d9e947b09086df12 288 SUPERFAMILY SSF161098 51 275 1.19E-48 T 14-10-2018 IPR035906 MetI-like superfamily Atu3894 b0aa7dc3263b6730d9e947b09086df12 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 277 3.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0535 856c5c2dccc22d03412bc34bf3181f6f 162 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 17 107 1.7E-14 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atu0535 856c5c2dccc22d03412bc34bf3181f6f 162 SUPERFAMILY SSF52788 15 148 9.29E-33 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Atu0535 856c5c2dccc22d03412bc34bf3181f6f 162 SMART SM00226 15 150 8.9E-14 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Atu0535 856c5c2dccc22d03412bc34bf3181f6f 162 Gene3D G3DSA:3.40.50.2300 13 150 2.4E-30 T 14-10-2018 Atu6083 257ae2acbb839616fff1d776b634ebf3 836 Pfam PF00082 Subtilase family 290 624 3.5E-35 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Atu6083 257ae2acbb839616fff1d776b634ebf3 836 Gene3D G3DSA:3.40.50.200 262 636 8.5E-30 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Atu6083 257ae2acbb839616fff1d776b634ebf3 836 SUPERFAMILY SSF52743 272 639 6.15E-40 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Atu1591 26011a67d281d5eb7ff3f9492fb758c1 267 Pfam PF01925 Sulfite exporter TauE/SafE 12 247 1.3E-42 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Atu1658 8a4b3bb5e755384b7d7239f3cc585f0e 597 Gene3D G3DSA:3.40.720.10 218 517 6.0E-36 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Atu1658 8a4b3bb5e755384b7d7239f3cc585f0e 597 Pfam PF00884 Sulfatase 224 515 1.4E-36 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Atu1658 8a4b3bb5e755384b7d7239f3cc585f0e 597 SUPERFAMILY SSF53649 285 490 2.11E-18 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Atu2105 2dd7c915a791b86097ce230342853673 198 Pfam PF06693 Protein of unknown function (DUF1190) 28 194 2.2E-30 T 14-10-2018 IPR009576 Biofilm formation YgiB Atu4202 6165a2415a4b1e6e2ce115a7d0d725ce 233 Pfam PF13649 Methyltransferase domain 56 150 3.8E-17 T 14-10-2018 Atu4202 6165a2415a4b1e6e2ce115a7d0d725ce 233 SUPERFAMILY SSF53335 15 219 2.66E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1372 42c2c2cf46d72bae4a843cb1a36e67e5 156 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 153 8.9E-34 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Atu1372 42c2c2cf46d72bae4a843cb1a36e67e5 156 SUPERFAMILY SSF55298 5 154 3.46E-53 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu1372 42c2c2cf46d72bae4a843cb1a36e67e5 156 Gene3D G3DSA:3.30.1330.40 1 156 1.1E-65 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Atu1838 6bfed999ae44e08ad1e347ef0df6d863 359 Gene3D G3DSA:3.40.50.2300 134 259 7.7E-40 T 14-10-2018 Atu1838 6bfed999ae44e08ad1e347ef0df6d863 359 Pfam PF13458 Periplasmic binding protein 24 348 4.0E-26 T 14-10-2018 IPR028081 Leucine-binding protein domain Atu1838 6bfed999ae44e08ad1e347ef0df6d863 359 Gene3D G3DSA:3.40.50.2300 24 330 7.7E-40 T 14-10-2018 Atu1838 6bfed999ae44e08ad1e347ef0df6d863 359 SUPERFAMILY SSF53822 24 354 1.74E-44 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu0997 88b363ac9ccc30c165d25769557a5cee 129 Gene3D G3DSA:1.10.10.10 3 119 3.0E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0997 88b363ac9ccc30c165d25769557a5cee 129 SUPERFAMILY SSF46785 13 114 9.39E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0997 88b363ac9ccc30c165d25769557a5cee 129 Pfam PF01638 HxlR-like helix-turn-helix 24 110 8.2E-33 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type Atu2441 ad5567c851797e94f8beedaf66f5dc3c 232 Gene3D G3DSA:3.40.1280.10 73 229 1.3E-37 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Atu2441 ad5567c851797e94f8beedaf66f5dc3c 232 Pfam PF00588 SpoU rRNA Methylase family 84 223 4.9E-27 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Atu2441 ad5567c851797e94f8beedaf66f5dc3c 232 SUPERFAMILY SSF75217 80 225 1.57E-31 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Atu1083 8995573d26fc5c0ccd0d0edd30e74a28 100 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 96 1.0E-13 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Atu0878 6a8b3247f00fb4d1aa1fc5c82b0c8540 243 SUPERFAMILY SSF46785 1 62 4.97E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Atu0878 6a8b3247f00fb4d1aa1fc5c82b0c8540 243 Gene3D G3DSA:1.10.10.10 1 64 3.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Atu0878 6a8b3247f00fb4d1aa1fc5c82b0c8540 243 Pfam PF08279 HTH domain 6 60 6.5E-18 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Atu0878 6a8b3247f00fb4d1aa1fc5c82b0c8540 243 Pfam PF13280 WYL domain 138 228 4.3E-13 T 14-10-2018 IPR026881 WYL domain Atu1782 71a7cf585ad48bcc496c3bcc2b239e8e 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 90 4.8E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu1782 71a7cf585ad48bcc496c3bcc2b239e8e 96 Gene3D G3DSA:3.30.2310.20 4 93 2.5E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu1782 71a7cf585ad48bcc496c3bcc2b239e8e 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 3.3E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Atu0578 17b38b43bf269bba88219140d160bc97 149 PIRSF PIRSF009533 3 147 1.1E-64 T 14-10-2018 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 Atu0578 17b38b43bf269bba88219140d160bc97 149 Hamap MF_00783 Probable flagellum biosynthesis repressor protein FlbT [flbT]. 5 130 32.551 T 14-10-2018 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 Atu0578 17b38b43bf269bba88219140d160bc97 149 Pfam PF07378 Flagellar protein FlbT 5 128 6.6E-42 T 14-10-2018 IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 Atu0717 f67a7b7395cec1b1eb15aaace57eb950 161 Pfam PF00430 ATP synthase B/B' CF(0) 14 136 7.9E-22 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atu0717 f67a7b7395cec1b1eb15aaace57eb950 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.931 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Atu2463 b650dbb2e1214a17ba5d155a396caa4a 258 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 33 134 1.3E-35 T 14-10-2018 IPR039366 YscW/ExsB Atu2463 b650dbb2e1214a17ba5d155a396caa4a 258 Gene3D G3DSA:2.40.128.270 148 258 6.0E-19 T 14-10-2018 IPR038670 HslJ-like superfamily Atu2463 b650dbb2e1214a17ba5d155a396caa4a 258 Pfam PF03724 META domain 150 255 5.5E-27 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ Atu4626 e0f15eef5840205940e8e347bf7c0270 528 Gene3D G3DSA:3.10.105.10 284 504 1.5E-107 T 14-10-2018 Atu4626 e0f15eef5840205940e8e347bf7c0270 528 SUPERFAMILY SSF53850 29 526 6.15E-105 T 14-10-2018 Atu4626 e0f15eef5840205940e8e347bf7c0270 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 437 3.5E-79 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Atu4626 e0f15eef5840205940e8e347bf7c0270 528 Gene3D G3DSA:3.40.190.10 205 515 1.5E-107 T 14-10-2018 Atu4626 e0f15eef5840205940e8e347bf7c0270 528 PIRSF PIRSF002741 1 528 1.2E-76 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Atu4626 e0f15eef5840205940e8e347bf7c0270 528 Gene3D G3DSA:3.90.76.10 44 204 1.5E-107 T 14-10-2018 Atu0508 66cf98186e886eefe27f7108df6831a4 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 86 1.8E-19 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Atu2383 0b9efc2f4000b009cbdb2972340adb34 141 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 37 128 7.7E-24 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 Atu2302 659c1bf4ae64dc84f559f9cbcd83608c 194 Pfam PF07298 NnrU protein 4 191 2.7E-60 T 14-10-2018 IPR009915 NnrU domain Atu3213 46dd6cd913007fedde25c4da5eeba687 329 SUPERFAMILY SSF161098 95 308 1.96E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu3213 46dd6cd913007fedde25c4da5eeba687 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 322 9.7E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3213 46dd6cd913007fedde25c4da5eeba687 329 Gene3D G3DSA:1.10.3720.10 90 317 2.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu1967 0dcb3fa1d6fe602594830aa6596aad73 210 Pfam PF03741 Integral membrane protein TerC family 14 196 3.6E-43 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Atu1967 0dcb3fa1d6fe602594830aa6596aad73 210 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 11 196 8.2E-67 T 14-10-2018 IPR022301 Integral membrane protein YjbE Atu4635 4c2a3f2f41d5a8e9dad1fe6d0048c4f1 179 Gene3D G3DSA:3.90.79.10 34 169 4.1E-20 T 14-10-2018 Atu4635 4c2a3f2f41d5a8e9dad1fe6d0048c4f1 179 SUPERFAMILY SSF55811 35 161 7.28E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Atu4635 4c2a3f2f41d5a8e9dad1fe6d0048c4f1 179 Pfam PF00293 NUDIX domain 37 152 7.3E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Atu6000 b57d2ca1cde79da4fc905cb3e303a7b7 371 SUPERFAMILY SSF51695 10 171 4.19E-12 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Atu1519 b07d4328fb958ff2f28ab443afeebb9d 272 Gene3D G3DSA:1.10.3470.10 29 260 6.8E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu1519 b07d4328fb958ff2f28ab443afeebb9d 272 Pfam PF00950 ABC 3 transport family 4 257 6.9E-72 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Atu1519 b07d4328fb958ff2f28ab443afeebb9d 272 SUPERFAMILY SSF81345 3 256 1.96E-36 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Atu4768 1278b2f583d6e79164536ed55acbd524 145 Pfam PF07012 Curlin associated repeat 26 50 6.4E-5 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 Atu4768 1278b2f583d6e79164536ed55acbd524 145 Pfam PF07012 Curlin associated repeat 78 111 1.8E-8 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 Atu0882 7fc3a63f30dd0b30c9dc3078c78f4b09 306 SUPERFAMILY SSF46626 42 171 1.62E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu0882 7fc3a63f30dd0b30c9dc3078c78f4b09 306 Gene3D G3DSA:1.10.760.10 175 305 7.6E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu0882 7fc3a63f30dd0b30c9dc3078c78f4b09 306 Gene3D G3DSA:1.10.760.10 4 159 1.9E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu0882 7fc3a63f30dd0b30c9dc3078c78f4b09 306 Pfam PF00034 Cytochrome c 46 148 4.1E-5 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu0882 7fc3a63f30dd0b30c9dc3078c78f4b09 306 SUPERFAMILY SSF46626 183 304 5.63E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1403 256f096d955d7e2b2be7e331ad14fb31 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 292 8.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu1403 256f096d955d7e2b2be7e331ad14fb31 305 SUPERFAMILY SSF161098 62 290 7.59E-55 T 14-10-2018 IPR035906 MetI-like superfamily Atu1403 256f096d955d7e2b2be7e331ad14fb31 305 Gene3D G3DSA:1.10.3720.10 57 302 3.0E-64 T 14-10-2018 IPR035906 MetI-like superfamily Atu4748 b08148f6430359876253c31716ee9913 283 Pfam PF01261 Xylose isomerase-like TIM barrel 27 209 4.7E-23 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4748 b08148f6430359876253c31716ee9913 283 Gene3D G3DSA:3.20.20.150 2 281 2.4E-60 T 14-10-2018 Atu4748 b08148f6430359876253c31716ee9913 283 SUPERFAMILY SSF51658 8 256 3.8E-50 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu1190 8c9d6a1ef6b694e45ecf8b3b5cd92296 196 Gene3D G3DSA:1.10.10.1190 138 194 2.3E-5 T 14-10-2018 Atu1190 8c9d6a1ef6b694e45ecf8b3b5cd92296 196 Pfam PF07275 Antirestriction protein (ArdA) 3 191 3.7E-54 T 14-10-2018 IPR009899 Antirestriction Atu2809 a01631745020f6804105f55615e44d96 321 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 321 95.951 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Atu2809 a01631745020f6804105f55615e44d96 321 Pfam PF03186 CobD/Cbib protein 7 300 2.6E-89 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Atu2809 a01631745020f6804105f55615e44d96 321 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 271 1.9E-59 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Atu4140 fe99a711894e7cb383ab747b20968466 286 Pfam PF09622 Putative integral membrane protein (DUF2391) 22 286 1.2E-98 T 14-10-2018 IPR024464 Protein of unknown function DUF2391 Atu4140 fe99a711894e7cb383ab747b20968466 286 TIGRFAM TIGR02587 TIGR02587: putative integral membrane protein TIGR02587 16 286 2.5E-141 T 14-10-2018 IPR013416 Conserved hypothetical protein CHP02587, putative integral membrane Atu0902 789e6e87cc071690234e205f8bf6c6c5 386 Pfam PF01594 AI-2E family transporter 54 371 1.3E-30 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Atu1901 8f674222f569d55f5bf4be3a09adf194 269 Gene3D G3DSA:3.40.50.970 3 268 5.0E-93 T 14-10-2018 Atu1901 8f674222f569d55f5bf4be3a09adf194 269 SUPERFAMILY SSF52518 4 265 9.63E-79 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Atu1901 8f674222f569d55f5bf4be3a09adf194 269 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 249 7.0E-46 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Atu5112 d5d1725425e418f3aa2814b0e631ccfb 440 PIRSF PIRSF028135 1 440 3.7E-202 T 14-10-2018 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like Atu5112 d5d1725425e418f3aa2814b0e631ccfb 440 Pfam PF07804 HipA-like C-terminal domain 173 391 1.5E-30 T 14-10-2018 IPR012893 HipA-like, C-terminal Atu0263 551f8607eb89a9cf3c223b7ef7fac3bc 316 Pfam PF00248 Aldo/keto reductase family 15 314 3.9E-76 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Atu0263 551f8607eb89a9cf3c223b7ef7fac3bc 316 SUPERFAMILY SSF51430 2 314 5.5E-94 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu0263 551f8607eb89a9cf3c223b7ef7fac3bc 316 Gene3D G3DSA:3.20.20.100 1 316 2.6E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Atu4014 3f8fb2e2b0c26d92a3ca98b1a1fb4d42 76 SMART SM00530 21 75 0.0018 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Atu4014 3f8fb2e2b0c26d92a3ca98b1a1fb4d42 76 Gene3D G3DSA:1.10.260.40 18 76 1.0E-7 T 14-10-2018 Atu4014 3f8fb2e2b0c26d92a3ca98b1a1fb4d42 76 SUPERFAMILY SSF47413 14 75 1.46E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Atu4263 5930384084a6a80ff3df94ec2acf5e7f 365 SUPERFAMILY SSF54506 6 175 2.67E-65 T 14-10-2018 Atu4263 5930384084a6a80ff3df94ec2acf5e7f 365 Gene3D G3DSA:3.10.310.10 174 340 1.7E-120 T 14-10-2018 Atu4263 5930384084a6a80ff3df94ec2acf5e7f 365 SUPERFAMILY SSF54506 178 356 7.46E-56 T 14-10-2018 Atu4263 5930384084a6a80ff3df94ec2acf5e7f 365 Pfam PF04303 PrpF protein 10 355 2.7E-131 T 14-10-2018 IPR007400 PrpF protein Atu4263 5930384084a6a80ff3df94ec2acf5e7f 365 Gene3D G3DSA:3.10.310.10 12 352 1.7E-120 T 14-10-2018 Atu6004 a8c69e3963f63909863585e5906fcb52 231 Pfam PF02027 RolB/RolC glucosidase family 4 204 1.5E-51 T 14-10-2018 IPR006064 Cytokinin glycosidase Atu1545 55e06033c8e10b4751a30171f87fc102 321 Pfam PF07786 Protein of unknown function (DUF1624) 15 234 9.9E-76 T 14-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 Atu6189 33a3f2d0a08ee3e327857a19fbaf810f 63 ProDom PD027292 PLASMID VIRE1 CROWN VIRULENCE TUMOR GALL TIORF162 1 63 9.0E-30 T 14-10-2018 IPR024237 VirE1 GO:0005515|GO:0006457|GO:0009405 Atu6189 33a3f2d0a08ee3e327857a19fbaf810f 63 Pfam PF12189 Single-strand DNA-binding protein 1 63 9.0E-44 T 14-10-2018 IPR024237 VirE1 GO:0005515|GO:0006457|GO:0009405 Atu1041 6630aa02b29e24530c07ba65823ca06c 244 Gene3D G3DSA:3.40.50.150 26 243 3.2E-69 T 14-10-2018 Atu1041 6630aa02b29e24530c07ba65823ca06c 244 Pfam PF08241 Methyltransferase domain 47 141 7.9E-25 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Atu1041 6630aa02b29e24530c07ba65823ca06c 244 SUPERFAMILY SSF53335 6 240 5.73E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu5132 e58048f651212eeb2061fa97ebfd0df2 420 Pfam PF02687 FtsX-like permease family 257 352 1.5E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu1334 166f81cf3d6b63c41399cba216fe4433 387 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 6.8E-11 T 14-10-2018 Atu1334 166f81cf3d6b63c41399cba216fe4433 387 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 166 190 6.8E-11 T 14-10-2018 Atu1334 166f81cf3d6b63c41399cba216fe4433 387 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 202 225 6.8E-11 T 14-10-2018 Atu1334 166f81cf3d6b63c41399cba216fe4433 387 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 94 114 6.8E-11 T 14-10-2018 Atu1334 166f81cf3d6b63c41399cba216fe4433 387 SUPERFAMILY SSF53383 9 386 1.48E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Atu1334 166f81cf3d6b63c41399cba216fe4433 387 Pfam PF00155 Aminotransferase class I and II 33 382 4.0E-54 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Atu1334 166f81cf3d6b63c41399cba216fe4433 387 Gene3D G3DSA:3.40.640.10 3 387 1.2E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Atu3327 39252201d50d6ff80f3786178fff19ad 226 Pfam PF02397 Bacterial sugar transferase 29 220 9.7E-64 T 14-10-2018 IPR003362 Bacterial sugar transferase Atu8117 3ed6c602c24066a42163dd6b13821dd9 133 Gene3D G3DSA:3.10.450.50 1 131 3.8E-38 T 14-10-2018 Atu8117 3ed6c602c24066a42163dd6b13821dd9 133 Pfam PF12680 SnoaL-like domain 7 117 3.9E-17 T 14-10-2018 IPR037401 SnoaL-like domain Atu8117 3ed6c602c24066a42163dd6b13821dd9 133 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 5 132 4.0E-42 T 14-10-2018 IPR011721 Conserved hypothetical protein CHP02096 Atu8117 3ed6c602c24066a42163dd6b13821dd9 133 SUPERFAMILY SSF54427 1 132 7.03E-28 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu1457 472bf3ee2f504eb0e14cad1d98a55f67 168 PIRSF PIRSF030820 1 166 2.8E-64 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 Atu1457 472bf3ee2f504eb0e14cad1d98a55f67 168 Pfam PF06073 Bacterial protein of unknown function (DUF934) 51 151 1.4E-34 T 14-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 Atu5183 4598109c3c53f98eaa2b6eb5092292d2 198 SUPERFAMILY SSF51735 1 180 1.43E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu5183 4598109c3c53f98eaa2b6eb5092292d2 198 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 90 1.3E-17 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Atu5183 4598109c3c53f98eaa2b6eb5092292d2 198 Gene3D G3DSA:3.40.50.720 1 197 1.1E-50 T 14-10-2018 Atu8192 afb97a3c1ace897e7a8daac59e46b849 90 Pfam PF13747 Domain of unknown function (DUF4164) 4 90 4.7E-32 T 14-10-2018 IPR025310 Protein of unknown function DUF4164 Atu0950 ef13076d52063dc8f087087a858c7cc4 554 PIRSF PIRSF007542 1 554 5.8E-276 T 14-10-2018 IPR012037 Alpha/beta-hydrolase family Atu0950 ef13076d52063dc8f087087a858c7cc4 554 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 29 236 8.1E-69 T 14-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain Atu0950 ef13076d52063dc8f087087a858c7cc4 554 Pfam PF10081 Alpha/beta-hydrolase family 253 540 1.4E-113 T 14-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain Atu2011 dbab2875a3d4ccdfe7a074a2c0fa1662 319 Gene3D G3DSA:3.60.10.10 2 317 3.7E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu2011 dbab2875a3d4ccdfe7a074a2c0fa1662 319 SUPERFAMILY SSF56219 13 317 6.02E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Atu1536 bd28ebaf2c2ce3a1655b7913f9bef28c 243 Gene3D G3DSA:1.10.760.10 44 235 2.4E-65 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1536 bd28ebaf2c2ce3a1655b7913f9bef28c 243 SUPERFAMILY SSF46626 21 227 5.1E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1536 bd28ebaf2c2ce3a1655b7913f9bef28c 243 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 231 7.5E-98 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Atu1536 bd28ebaf2c2ce3a1655b7913f9bef28c 243 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 8 238 1.4E-121 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Atu1978 aca474a4a350d41fc53dde9f2adcd235 272 Pfam PF07103 Protein of unknown function (DUF1365) 9 247 7.3E-65 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 Atu2603 9981bf57dd8b046d47832eaa1a730f74 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 289 6.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2603 9981bf57dd8b046d47832eaa1a730f74 294 SUPERFAMILY SSF161098 54 280 5.63E-53 T 14-10-2018 IPR035906 MetI-like superfamily Atu2603 9981bf57dd8b046d47832eaa1a730f74 294 Gene3D G3DSA:1.10.3720.10 48 293 5.9E-63 T 14-10-2018 IPR035906 MetI-like superfamily Atu4198 6ed9a20c5206f24d44c5aab10273e5a6 98 SUPERFAMILY SSF53822 1 80 1.77E-5 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu4198 6ed9a20c5206f24d44c5aab10273e5a6 98 Gene3D G3DSA:3.40.50.2300 1 93 1.4E-9 T 14-10-2018 Atu3358 91298588593ae97fe17a7ea457e2f5d8 210 Gene3D G3DSA:1.10.3720.10 1 205 3.5E-38 T 14-10-2018 IPR035906 MetI-like superfamily Atu3358 91298588593ae97fe17a7ea457e2f5d8 210 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 14 203 4.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3358 91298588593ae97fe17a7ea457e2f5d8 210 SUPERFAMILY SSF161098 1 189 7.46E-32 T 14-10-2018 IPR035906 MetI-like superfamily Atu1187 f9939e51258814815b9f8eb266af7eec 458 Pfam PF03906 Phage T7 tail fibre protein 3 150 5.7E-72 T 14-10-2018 IPR005604 Bacteriophage T7 tail fibre protein Atu1170 b7f328d2e8286f12b3342ae62ecf83aa 210 Pfam PF01810 LysE type translocator 18 208 4.3E-30 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu1170 b7f328d2e8286f12b3342ae62ecf83aa 210 PIRSF PIRSF006324 1 210 3.2E-50 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu4114 f11765baa40298cf68f49fd2e2db50c0 335 Gene3D G3DSA:1.10.3720.10 87 326 1.0E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu4114 f11765baa40298cf68f49fd2e2db50c0 335 SUPERFAMILY SSF161098 92 320 6.87E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu4114 f11765baa40298cf68f49fd2e2db50c0 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 3.9E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu0046 193dbaa52ef311ad18802547d9425826 321 Pfam PF07182 Protein of unknown function (DUF1402) 19 321 2.1E-159 T 14-10-2018 IPR009842 Protein of unknown function DUF1402 Atu4585 b69be82ca6b9aee213ea828d80859ccf 175 SUPERFAMILY SSF53597 4 174 5.24E-32 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu4585 b69be82ca6b9aee213ea828d80859ccf 175 Gene3D G3DSA:3.40.430.10 6 173 2.5E-36 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Atu4585 b69be82ca6b9aee213ea828d80859ccf 175 Pfam PF01872 RibD C-terminal domain 53 167 8.5E-14 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Atu2414 0a0615f56e3694378fea55f2a12e6031 429 Gene3D G3DSA:3.40.50.2300 146 386 1.6E-131 T 14-10-2018 Atu2414 0a0615f56e3694378fea55f2a12e6031 429 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 391 1.6E-169 T 14-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like Atu2414 0a0615f56e3694378fea55f2a12e6031 429 Pfam PF13433 Periplasmic binding protein domain 31 398 2.7E-168 T 14-10-2018 Atu2414 0a0615f56e3694378fea55f2a12e6031 429 SUPERFAMILY SSF53822 30 396 4.42E-88 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Atu2414 0a0615f56e3694378fea55f2a12e6031 429 Gene3D G3DSA:3.40.50.2300 33 367 1.6E-131 T 14-10-2018 Atu5277 10c203a216ffe626438588d5332f2a40 135 Pfam PF04120 Low affinity iron permease 5 121 2.1E-46 T 14-10-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 Atu0044 6a4f70c17f680b011006b96e39ce4139 160 SUPERFAMILY SSF56235 1 157 2.04E-50 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu0044 6a4f70c17f680b011006b96e39ce4139 160 Gene3D G3DSA:3.60.20.10 1 158 2.0E-61 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu0044 6a4f70c17f680b011006b96e39ce4139 160 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 1 157 2.4E-78 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Atu0044 6a4f70c17f680b011006b96e39ce4139 160 Pfam PF00227 Proteasome subunit 1 156 1.2E-18 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Atu1805 5f08a592ef0808f4b47c1545f3b99c7f 82 Pfam PF04972 BON domain 20 70 3.1E-8 T 14-10-2018 IPR007055 BON domain Atu3711 d2c8aa913500db6dbc5a9f27c10e6047 443 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 19 315 19.909 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atu3711 d2c8aa913500db6dbc5a9f27c10e6047 443 Gene3D G3DSA:3.40.50.620 23 260 4.9E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Atu3711 d2c8aa913500db6dbc5a9f27c10e6047 443 Pfam PF01171 PP-loop family 31 215 1.8E-42 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Atu3711 d2c8aa913500db6dbc5a9f27c10e6047 443 SUPERFAMILY SSF52402 25 217 8.76E-41 T 14-10-2018 Atu3711 d2c8aa913500db6dbc5a9f27c10e6047 443 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 31 217 1.1E-40 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Atu1514 c50491df49515e6f3ce08b03d0df91cc 266 Gene3D G3DSA:3.20.20.410 1 266 4.0E-51 T 14-10-2018 IPR036520 UPF0759 superfamily Atu1514 c50491df49515e6f3ce08b03d0df91cc 266 Pfam PF01904 Protein of unknown function DUF72 24 264 6.7E-56 T 14-10-2018 IPR002763 Protein of unknown function DUF72 Atu1514 c50491df49515e6f3ce08b03d0df91cc 266 SUPERFAMILY SSF117396 7 265 1.83E-69 T 14-10-2018 IPR036520 UPF0759 superfamily Atu8143 07510f6f85e65786f971883ab7017662 286 SUPERFAMILY SSF56925 172 286 5.1E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu8143 07510f6f85e65786f971883ab7017662 286 Pfam PF06629 MltA-interacting protein MipA 67 286 9.3E-44 T 14-10-2018 IPR010583 MltA-interacting MipA Atu0229 6e934c543c661fb8652f5ea432086e72 149 Pfam PF07681 DoxX 29 106 1.5E-14 T 14-10-2018 IPR032808 DoxX family Atu1889 88a074c7d739c24f391e60436c20061a 134 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 81 92 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Atu1889 88a074c7d739c24f391e60436c20061a 134 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 125 7.1E-21 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Atu1889 88a074c7d739c24f391e60436c20061a 134 Gene3D G3DSA:1.10.3830.10 15 132 7.3E-27 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Atu0580 c3c117305e6ac30ebe0a8a181fb52072 88 Pfam PF01313 Bacterial export proteins, family 3 6 76 2.4E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atu0580 c3c117305e6ac30ebe0a8a181fb52072 88 PIRSF PIRSF004669 1 88 1.5E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atu0580 c3c117305e6ac30ebe0a8a181fb52072 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atu0580 c3c117305e6ac30ebe0a8a181fb52072 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atu0580 c3c117305e6ac30ebe0a8a181fb52072 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Atu0232 8aa5a46050e177594c626a91319c1a1b 62 Pfam PF07411 Domain of unknown function (DUF1508) 9 56 7.2E-21 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 Atu0232 8aa5a46050e177594c626a91319c1a1b 62 Gene3D G3DSA:3.30.160.160 1 48 6.2E-26 T 14-10-2018 Atu0232 8aa5a46050e177594c626a91319c1a1b 62 SUPERFAMILY SSF160113 1 59 1.83E-19 T 14-10-2018 IPR036913 YegP-like superfamily Atu6158 9fba7bf03e52c03428bb0ddc3d962591 106 Pfam PF07804 HipA-like C-terminal domain 5 106 3.3E-21 T 14-10-2018 IPR012893 HipA-like, C-terminal Atu4389 3f23f9faf67b9280fdb2dc5010e57b3c 150 SUPERFAMILY SSF46626 33 148 3.65E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu4389 3f23f9faf67b9280fdb2dc5010e57b3c 150 Pfam PF00034 Cytochrome c 50 134 1.8E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu4389 3f23f9faf67b9280fdb2dc5010e57b3c 150 Gene3D G3DSA:1.10.760.10 1 150 1.7E-42 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Atu1985 99b676b45e56ad9db7a38ce09cc2cc41 145 SUPERFAMILY SSF52172 6 135 1.71E-26 T 14-10-2018 IPR011006 CheY-like superfamily Atu1985 99b676b45e56ad9db7a38ce09cc2cc41 145 Pfam PF00072 Response regulator receiver domain 10 132 2.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1985 99b676b45e56ad9db7a38ce09cc2cc41 145 Gene3D G3DSA:3.40.50.2300 5 143 8.8E-32 T 14-10-2018 Atu1985 99b676b45e56ad9db7a38ce09cc2cc41 145 SMART SM00448 8 132 4.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Atu1483 42a10544c0dcf98777df70807d21cebe 214 Pfam PF01292 Prokaryotic cytochrome b561 25 198 3.2E-26 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Atu1483 42a10544c0dcf98777df70807d21cebe 214 SUPERFAMILY SSF81342 19 198 3.06E-32 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Atu1758 dace8438a2bf607f2225f99fb9217b27 144 Pfam PF07370 Protein of unknown function (DUF1489) 5 144 5.7E-55 T 14-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 Atu1758 dace8438a2bf607f2225f99fb9217b27 144 PIRSF PIRSF032025 1 144 7.0E-77 T 14-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 Atu5366 4df93e56e949bfb2452d4aaf2880b54f 128 Pfam PF01527 Transposase 29 77 8.1E-16 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu5366 4df93e56e949bfb2452d4aaf2880b54f 128 SUPERFAMILY SSF48295 24 77 1.31E-10 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu4801 a821164a171d3a1043893361d5e02eff 356 SUPERFAMILY SSF51735 1 324 3.03E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu4801 a821164a171d3a1043893361d5e02eff 356 Gene3D G3DSA:3.40.50.720 1 308 7.9E-52 T 14-10-2018 Atu4801 a821164a171d3a1043893361d5e02eff 356 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 237 1.7E-38 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Atu2335 4b3ab347c197add8f236b3f9f92e9e6a 131 Pfam PF07681 DoxX 18 92 2.6E-13 T 14-10-2018 IPR032808 DoxX family Atu6108 824e2cde6ccb1fa763ceecf36bea5312 101 Pfam PF03831 PhnA domain 34 100 2.2E-30 T 14-10-2018 IPR013988 PhnA protein, C-terminal Atu6108 824e2cde6ccb1fa763ceecf36bea5312 101 Gene3D G3DSA:2.30.30.40 30 101 4.8E-33 T 14-10-2018 Atu6108 824e2cde6ccb1fa763ceecf36bea5312 101 SUPERFAMILY SSF82057 31 100 2.24E-25 T 14-10-2018 Atu5016 97cd4c47e0078d19b517d7eceb7ac7e5 382 Pfam PF07756 Protein of unknown function (DUF1612) 194 320 2.4E-53 T 14-10-2018 IPR011670 Protein of unknown function DUF1612 Atu5016 97cd4c47e0078d19b517d7eceb7ac7e5 382 Pfam PF11972 HTH DNA binding domain 329 382 4.2E-29 T 14-10-2018 IPR021068 HTH DNA binding domain Atu0879 50a9a2fdc0a3c548f6eaa91519fb49eb 214 Pfam PF01810 LysE type translocator 18 202 1.2E-23 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu2174 23cd05f00252a7691464071038238eb9 159 Pfam PF11158 Protein of unknown function (DUF2938) 9 157 3.8E-65 T 14-10-2018 IPR021329 Protein of unknown function DUF2938 Atu4398 11656cfa16ddfa962eb8571b2d4776a5 312 Pfam PF01136 Peptidase family U32 114 257 3.6E-17 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Atu3384 7e009399e2003743512fa8a428b17c9c 251 Gene3D G3DSA:2.150.10.10 4 249 2.9E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu3384 7e009399e2003743512fa8a428b17c9c 251 SUPERFAMILY SSF51120 151 245 1.01E-7 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Atu4731 132b56a8eeff76f7b0f31b808a3cabbc 812 Gene3D G3DSA:2.60.40.2610 638 730 7.5E-15 T 14-10-2018 Atu4731 132b56a8eeff76f7b0f31b808a3cabbc 812 Gene3D G3DSA:2.60.40.3110 254 342 1.4E-10 T 14-10-2018 Atu4731 132b56a8eeff76f7b0f31b808a3cabbc 812 Pfam PF00577 Outer membrane usher protein 246 723 4.0E-32 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 Atu4404 9453eea5f9f8aadd5db9b2e40e5651a9 395 Pfam PF05940 NnrS protein 5 386 1.0E-71 T 14-10-2018 IPR010266 NnrS Atu1412 468216044831c8218f60b308d2b8025e 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 330 7.5E-18 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu6147 33221632bb048a197c7184376f87a0bf 327 Pfam PF14486 Domain of unknown function (DUF4432) 29 303 1.3E-66 T 14-10-2018 IPR027839 Protein of unknown function DUF4432 Atu6147 33221632bb048a197c7184376f87a0bf 327 Gene3D G3DSA:2.70.98.80 4 323 5.3E-79 T 14-10-2018 Atu4002 743bb6a0521dc298fdcbd11ddeb4b623 297 SUPERFAMILY SSF103481 193 297 5.1E-8 T 14-10-2018 Atu4002 743bb6a0521dc298fdcbd11ddeb4b623 297 SUPERFAMILY SSF103481 42 141 4.05E-14 T 14-10-2018 Atu4002 743bb6a0521dc298fdcbd11ddeb4b623 297 Pfam PF00892 EamA-like transporter family 4 136 6.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4002 743bb6a0521dc298fdcbd11ddeb4b623 297 Pfam PF00892 EamA-like transporter family 157 295 4.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Atu4227 9417055833fc2ed6146c4ac26f798370 301 SUPERFAMILY SSF56235 2 298 4.77E-49 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu4227 9417055833fc2ed6146c4ac26f798370 301 Pfam PF13522 Glutamine amidotransferase domain 140 269 6.2E-22 T 14-10-2018 Atu4227 9417055833fc2ed6146c4ac26f798370 301 Gene3D G3DSA:3.60.20.10 108 301 2.9E-40 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu4227 9417055833fc2ed6146c4ac26f798370 301 Gene3D G3DSA:3.60.20.10 2 84 3.0E-5 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu1799 d44dd0b659b7840f5c5ba5cbdb78b747 247 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 8 182 5.0E-15 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 Atu1974 70cf70a1b08678f47a0800b04feb5ca5 341 Pfam PF02353 Mycolic acid cyclopropane synthetase 62 298 7.4E-39 T 14-10-2018 Atu1974 70cf70a1b08678f47a0800b04feb5ca5 341 SUPERFAMILY SSF53335 65 331 3.84E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu1974 70cf70a1b08678f47a0800b04feb5ca5 341 Gene3D G3DSA:3.40.50.150 55 334 5.3E-66 T 14-10-2018 Atu0914 f26afb9580ee13e53f6b02b6f97d7efb 128 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 8.3E-18 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Atu6129 66916aa8a1070594536666fb18f1cd97 365 Gene3D G3DSA:3.60.110.10 175 362 2.6E-6 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu6129 66916aa8a1070594536666fb18f1cd97 365 PIRSF PIRSF017932 1 365 1.5E-198 T 14-10-2018 IPR016707 Conjugal transfer, TraB, rhizobiales GO:0000746|GO:0016021 Atu6129 66916aa8a1070594536666fb18f1cd97 365 Pfam PF00795 Carbon-nitrogen hydrolase 26 353 2.4E-63 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Atu6129 66916aa8a1070594536666fb18f1cd97 365 SUPERFAMILY SSF56317 187 362 2.75E-16 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Atu2272 bd50f6fe6d29f8d84c7f5fdf0c559733 248 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 243 1.1E-67 T 14-10-2018 IPR018648 Protein of unknown function DUF2076 Atu2370 4e8f69c7c8159f65d9a47f434f58c0b5 361 SUPERFAMILY SSF53448 83 229 2.25E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu4340 067640429babcdab798558a3ddad4449 464 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 12 444 8.1E-124 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Atu4340 067640429babcdab798558a3ddad4449 464 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 14 444 1.5E-153 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Atu8144 8faa73d2e1c4720a64b0e81d56e6e575 87 SUPERFAMILY SSF81901 18 67 6.67E-6 T 14-10-2018 Atu8144 8faa73d2e1c4720a64b0e81d56e6e575 87 Gene3D G3DSA:1.25.40.10 10 87 1.8E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Atu0199 e409a470d8e38a6ab5264b0288b40acf 303 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 298 7.5E-57 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Atu0199 e409a470d8e38a6ab5264b0288b40acf 303 Gene3D G3DSA:3.40.190.120 127 240 5.1E-97 T 14-10-2018 Atu0199 e409a470d8e38a6ab5264b0288b40acf 303 SUPERFAMILY SSF53850 24 301 9.23E-56 T 14-10-2018 Atu0199 e409a470d8e38a6ab5264b0288b40acf 303 Gene3D G3DSA:3.40.190.10 26 296 5.1E-97 T 14-10-2018 Atu3242 62dfa699805cc24671c50bbda975fdd7 213 Pfam PF06283 Trehalose utilisation 4 211 1.2E-41 T 14-10-2018 IPR029010 ThuA-like domain Atu3242 62dfa699805cc24671c50bbda975fdd7 213 Gene3D G3DSA:3.40.50.880 2 213 1.1E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu3242 62dfa699805cc24671c50bbda975fdd7 213 SUPERFAMILY SSF52317 4 213 1.16E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Atu1302 dfaf3a0f72a43c193f4c4f6390cff290 147 Pfam PF06170 Protein of unknown function (DUF983) 42 126 1.1E-31 T 14-10-2018 IPR009325 Protein of unknown function DUF983 Atu6076 cac7b1e38ff5649ed4b755114a6e94e3 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 331 3.7E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu6076 cac7b1e38ff5649ed4b755114a6e94e3 333 SUPERFAMILY SSF161098 103 319 2.35E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu6076 cac7b1e38ff5649ed4b755114a6e94e3 333 Gene3D G3DSA:1.10.3720.10 98 327 5.7E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu5269 8ee2643adeffb78e1498d6b6040604b2 490 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 12 441 1.8E-95 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu5269 8ee2643adeffb78e1498d6b6040604b2 490 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 437 4.2E-119 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu2234 cda32ee12ab2aad0f3ca8d72a1659a6e 157 Gene3D G3DSA:3.10.129.10 6 149 6.0E-37 T 14-10-2018 Atu2234 cda32ee12ab2aad0f3ca8d72a1659a6e 157 Pfam PF01575 MaoC like domain 22 111 4.5E-13 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Atu2234 cda32ee12ab2aad0f3ca8d72a1659a6e 157 SUPERFAMILY SSF54637 6 151 7.46E-32 T 14-10-2018 IPR029069 HotDog domain superfamily Atu8168 be8caddf6fbe4137dadf73158452971f 117 SUPERFAMILY SSF54427 3 116 1.0E-27 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu8168 be8caddf6fbe4137dadf73158452971f 117 Gene3D G3DSA:3.10.450.50 2 116 1.8E-35 T 14-10-2018 Atu8168 be8caddf6fbe4137dadf73158452971f 117 Pfam PF12893 Putative lumazine-binding 3 114 7.7E-26 T 14-10-2018 IPR039437 Putative lumazine-binding Atu4303 1c4781d80b3834498de616d6af61815e 143 Gene3D G3DSA:3.10.580.10 1 140 2.3E-25 T 14-10-2018 Atu4303 1c4781d80b3834498de616d6af61815e 143 Pfam PF00571 CBS domain 11 60 0.0016 T 14-10-2018 IPR000644 CBS domain Atu4303 1c4781d80b3834498de616d6af61815e 143 Pfam PF00571 CBS domain 69 124 1.1E-8 T 14-10-2018 IPR000644 CBS domain Atu4303 1c4781d80b3834498de616d6af61815e 143 SUPERFAMILY SSF54631 9 136 2.32E-22 T 14-10-2018 Atu6035 eb4bc48e4f501c37be82324a88ecdb73 398 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 66 269 2.9E-30 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Atu6035 eb4bc48e4f501c37be82324a88ecdb73 398 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 29 320 7.9E-97 T 14-10-2018 IPR014150 Conjugal transfer, TrbL Atu4580 a2b992eab9f428182e4b664513088521 318 SUPERFAMILY SSF81606 11 130 7.32E-5 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Atu3366 e85bbd10b1eba62994990603769eb6a0 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.1E-24 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu1360 ccf636e6a4f58cb4a164cdaf87ef4910 413 Pfam PF04347 Flagellar biosynthesis protein, FliO 32 98 3.5E-9 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Atu0102 3364737486623412e0398f46b8c96e46 241 Pfam PF02397 Bacterial sugar transferase 47 233 1.3E-61 T 14-10-2018 IPR003362 Bacterial sugar transferase Atu1078 bc1375170fb96b76cbf75307987316b5 54 Gene3D G3DSA:3.30.2310.20 1 47 1.0E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Atu4874 8fcb34076c82a791ce663c3773506ff7 144 Gene3D G3DSA:3.30.70.100 11 144 4.0E-28 T 14-10-2018 Atu0900 064235e4ea14979156fd54ae61d9d707 248 SUPERFAMILY SSF88713 44 240 8.34E-24 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Atu0900 064235e4ea14979156fd54ae61d9d707 248 Gene3D G3DSA:3.20.20.370 45 243 6.7E-24 T 14-10-2018 Atu0900 064235e4ea14979156fd54ae61d9d707 248 Pfam PF01522 Polysaccharide deacetylase 43 175 1.9E-17 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Atu1113 5ede62f66b7ab959a08df3f18f97a340 308 Gene3D G3DSA:3.30.360.10 117 308 6.8E-84 T 14-10-2018 Atu1113 5ede62f66b7ab959a08df3f18f97a340 308 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 113 4.0E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Atu1113 5ede62f66b7ab959a08df3f18f97a340 308 SUPERFAMILY SSF51735 5 170 6.24E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu1113 5ede62f66b7ab959a08df3f18f97a340 308 Gene3D G3DSA:3.40.50.720 1 116 3.9E-39 T 14-10-2018 Atu4869 6f7737aad35086179f04dfc8cd09406e 140 Pfam PF06719 AraC-type transcriptional regulator N-terminus 9 102 1.5E-20 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Atu5209 f1bba4077aa53e8139093ef5f95dbd26 109 Pfam PF12680 SnoaL-like domain 10 104 1.4E-6 T 14-10-2018 IPR037401 SnoaL-like domain Atu5209 f1bba4077aa53e8139093ef5f95dbd26 109 SUPERFAMILY SSF54427 5 103 1.96E-11 T 14-10-2018 IPR032710 NTF2-like domain superfamily Atu5209 f1bba4077aa53e8139093ef5f95dbd26 109 Gene3D G3DSA:3.10.450.50 2 107 1.4E-31 T 14-10-2018 Atu4372 f6aac03a0d6080c6e31ad84063b0cf69 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 311 1.9E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu6086 b5fd91c312e19733bb5efca4c31dac55 266 SUPERFAMILY SSF161098 64 250 1.83E-31 T 14-10-2018 IPR035906 MetI-like superfamily Atu6086 b5fd91c312e19733bb5efca4c31dac55 266 Gene3D G3DSA:1.10.3720.10 65 256 3.1E-22 T 14-10-2018 IPR035906 MetI-like superfamily Atu6086 b5fd91c312e19733bb5efca4c31dac55 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 256 1.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3467 fb7bbc91d329d34dc0554704f9395c45 124 Pfam PF04143 Sulphur transport 37 113 4.1E-8 T 14-10-2018 IPR007272 Sulphur transport domain Atu0091 550fbaecc66a3cefee9f7c06405464f1 503 Gene3D G3DSA:1.20.1250.20 1 359 1.3E-38 T 14-10-2018 Atu0091 550fbaecc66a3cefee9f7c06405464f1 503 SUPERFAMILY SSF103473 1 359 4.32E-49 T 14-10-2018 IPR036259 MFS transporter superfamily Atu0091 550fbaecc66a3cefee9f7c06405464f1 503 Pfam PF05977 Transmembrane secretion effector 1 487 3.0E-207 T 14-10-2018 IPR010290 Transmembrane secretion effector Atu2176 40c9fefaf22c65c3c4c9f569f891e24a 162 Pfam PF10067 Predicted membrane protein (DUF2306) 15 110 1.0E-13 T 14-10-2018 IPR018750 Protein of unknown function DUF2306, membrane Atu1893 08e2daef7d27c50114a6d81de33eac6c 235 SUPERFAMILY SSF50630 117 221 1.2E-17 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily Atu1893 08e2daef7d27c50114a6d81de33eac6c 235 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 114 233 1.4E-41 T 14-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Atu1893 08e2daef7d27c50114a6d81de33eac6c 235 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 138 149 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Atu1893 08e2daef7d27c50114a6d81de33eac6c 235 Pfam PF13975 gag-polyprotein putative aspartyl protease 128 218 3.4E-23 T 14-10-2018 Atu1893 08e2daef7d27c50114a6d81de33eac6c 235 Gene3D G3DSA:2.40.70.10 106 234 3.4E-32 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily Atu0722 31af1753ae47a3a2568af7a5107163b0 172 Gene3D G3DSA:3.90.550.10 1 144 6.9E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu0722 31af1753ae47a3a2568af7a5107163b0 172 SUPERFAMILY SSF53448 2 120 4.28E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Atu3506 b309b649196078a29e240f29eba96304 133 Pfam PF11154 Protein of unknown function (DUF2934) 54 85 2.5E-13 T 14-10-2018 IPR021327 Protein of unknown function DUF2934 Atu0854 b651b33d2d37227c60bbb3b2e4124127 164 Pfam PF07617 Protein of unknown function (DUF1579) 7 162 5.7E-52 T 14-10-2018 IPR011473 Protein of unknown function DUF1579 Atu2277 592e66bb621c9222f6161841900f2a09 391 Pfam PF11294 Protein of unknown function (DUF3095) 8 382 4.6E-141 T 14-10-2018 IPR021445 Protein of unknown function DUF3095 Atu2655 7ca8e6920e93dbe7ab517af9246681db 481 Pfam PF09731 Mitochondrial inner membrane protein 275 454 8.1E-10 T 14-10-2018 IPR019133 Mitochondrial inner membrane protein Mitofilin Reactome: R-HSA-8949613 Atu2051 f3af1be81e7954c06935010f4be32ed1 69 Gene3D G3DSA:1.10.3990.20 1 69 2.2E-15 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily Atu2051 f3af1be81e7954c06935010f4be32ed1 69 Pfam PF13467 Ribbon-helix-helix domain 3 66 1.1E-25 T 14-10-2018 IPR027373 Ribbon-helix-helix domain Atu5028 905b64b0b500320a497dec9a04e97b5f 125 Pfam PF01527 Transposase 16 94 1.3E-24 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu5028 905b64b0b500320a497dec9a04e97b5f 125 SUPERFAMILY SSF48295 15 69 1.62E-13 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu1421 a922abe41557d84c2415e56c0edc0b0d 291 Gene3D G3DSA:3.20.20.140 14 290 8.2E-60 T 14-10-2018 Atu1421 a922abe41557d84c2415e56c0edc0b0d 291 SUPERFAMILY SSF51556 9 291 1.85E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase Atu1421 a922abe41557d84c2415e56c0edc0b0d 291 Pfam PF04909 Amidohydrolase 68 291 2.0E-52 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Atu5227 3750bb575bf596fc4b4c96ef5d2f5d4b 358 Gene3D G3DSA:3.20.20.30 1 348 2.1E-70 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu5227 3750bb575bf596fc4b4c96ef5d2f5d4b 358 Pfam PF00296 Luciferase-like monooxygenase 1 315 5.4E-58 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Atu5227 3750bb575bf596fc4b4c96ef5d2f5d4b 358 SUPERFAMILY SSF51679 13 344 2.0E-69 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Atu0663 8379e0e71fa92a336c5b5dbc26c7b1c3 424 Pfam PF11902 Protein of unknown function (DUF3422) 11 419 6.8E-154 T 14-10-2018 IPR021830 Protein of unknown function DUF3422 Atu0890 d80c26bffbabe39f10d0a484e27a74f3 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 7.8E-21 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Atu0890 d80c26bffbabe39f10d0a484e27a74f3 90 Gene3D G3DSA:1.20.58.1000 1 90 5.0E-28 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Atu4436 c4def87f5fa873262111d53feab7d7d3 345 Pfam PF01609 Transposase DDE domain 137 330 1.3E-26 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Atu4436 c4def87f5fa873262111d53feab7d7d3 345 Pfam PF05598 Transposase domain (DUF772) 51 124 6.6E-26 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Atu0294 18c76ab27bcba3fca78332bcb7bfc139 268 Pfam PF02673 Bacitracin resistance protein BacA 9 259 1.7E-76 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atu0294 18c76ab27bcba3fca78332bcb7bfc139 268 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 6.7E-69 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atu0294 18c76ab27bcba3fca78332bcb7bfc139 268 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.199 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Atu0313 7230e923f7268e261fe33ee7330ef609 205 Pfam PF01810 LysE type translocator 15 202 1.4E-26 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Atu1972 d61d2b511f61fd1699c5e5ce9a976c3d 108 Pfam PF07886 BA14K-like protein 76 105 3.9E-13 T 14-10-2018 IPR012413 BA14k family GO:0009405 Atu4714 069377b2a894874d6ad9981c7e48b99c 168 Pfam PF06186 Protein of unknown function (DUF992) 28 165 6.0E-51 T 14-10-2018 IPR009333 Protein of unknown function DUF992 Atu5538 d656dd5082b5525f8e411a36e15a556a 153 Pfam PF13548 Domain of unknown function (DUF4126) 3 153 1.7E-6 T 14-10-2018 IPR025196 Domain of unknown function DUF4126 Atu0910 75088f22f8f2cb1e5b2edd1e715c32a8 139 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 5 127 3.2E-31 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Atu0464 96989503d680682f45c830c790743adb 107 Pfam PF16083 LydA holin phage, holin superfamily III 21 96 9.3E-18 T 14-10-2018 IPR032126 LydA-like holin Atu5331 728496dc0ea883d45b4f99cfb0ba85c0 154 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 18 150 5.3E-15 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 Atu8085 9fdf204ca042b3b44cbf98cd7df7d7f5 147 Gene3D G3DSA:2.60.120.380 43 145 4.9E-9 T 14-10-2018 Atu1182 0d4239754d7e37c5e5f875843e435bc0 242 SUPERFAMILY SSF50199 143 233 4.32E-9 T 14-10-2018 Atu3367 42d8fb2bce5b7e1ca5351fb5bd9ed522 489 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 434 5.9E-109 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Atu3367 42d8fb2bce5b7e1ca5351fb5bd9ed522 489 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 438 4.9E-99 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Atu3047 07bb46f1cd80cc3b029739ce6b339344 296 SUPERFAMILY SSF161098 89 275 2.22E-27 T 14-10-2018 IPR035906 MetI-like superfamily Atu3047 07bb46f1cd80cc3b029739ce6b339344 296 Gene3D G3DSA:1.10.3720.10 84 290 1.9E-21 T 14-10-2018 IPR035906 MetI-like superfamily Atu3047 07bb46f1cd80cc3b029739ce6b339344 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 293 3.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu3047 07bb46f1cd80cc3b029739ce6b339344 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 69 1.0E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Atu3192 4798dd8b2dcb3d8f0c9a32f6e9b6f443 431 Gene3D G3DSA:1.20.1250.20 14 211 2.9E-22 T 14-10-2018 Atu3192 4798dd8b2dcb3d8f0c9a32f6e9b6f443 431 Gene3D G3DSA:1.20.1250.20 224 428 1.3E-16 T 14-10-2018 Atu3192 4798dd8b2dcb3d8f0c9a32f6e9b6f443 431 SUPERFAMILY SSF103473 16 420 2.22E-55 T 14-10-2018 IPR036259 MFS transporter superfamily Atu3192 4798dd8b2dcb3d8f0c9a32f6e9b6f443 431 Pfam PF07690 Major Facilitator Superfamily 26 383 5.4E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Atu3535 2dd009d7ba7000c7b6c5566328847db0 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 308 2.4E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu3704 c94143cf619d06a6a453bf56d562ebbe 396 PIRSF PIRSF028704 1 396 3.4E-153 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC Atu3704 c94143cf619d06a6a453bf56d562ebbe 396 Pfam PF10129 OpgC protein 7 384 1.4E-91 T 14-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC Atu4750 0272e6f5806ee5fa61468c28741576ea 289 Pfam PF01261 Xylose isomerase-like TIM barrel 23 221 4.3E-27 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu4750 0272e6f5806ee5fa61468c28741576ea 289 Gene3D G3DSA:3.20.20.150 2 289 6.7E-80 T 14-10-2018 Atu4750 0272e6f5806ee5fa61468c28741576ea 289 SUPERFAMILY SSF51658 1 262 6.94E-53 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu4095 c0bd55d768590c47fe6aa09fb418a7ad 83 Pfam PF04226 Transglycosylase associated protein 36 83 1.4E-11 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Atu4392 18a368d183c43c5ecddbf7cf55f7a345 225 Pfam PF07298 NnrU protein 3 221 5.9E-64 T 14-10-2018 IPR009915 NnrU domain Atu4094 fb08878c1d255c2bc76b416a8495f5ce 139 Pfam PF12200 Domain of unknown function (DUF3597) 4 134 2.9E-52 T 14-10-2018 IPR022016 Domain of unknown function DUF3597 Atu4094 fb08878c1d255c2bc76b416a8495f5ce 139 SUPERFAMILY SSF158634 1 139 2.48E-49 T 14-10-2018 Atu4432 07488ca9259ed973e091dab04ed5b4a8 355 Gene3D G3DSA:1.10.3720.10 106 350 1.6E-23 T 14-10-2018 IPR035906 MetI-like superfamily Atu4432 07488ca9259ed973e091dab04ed5b4a8 355 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 353 2.4E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4432 07488ca9259ed973e091dab04ed5b4a8 355 SUPERFAMILY SSF161098 112 336 2.29E-18 T 14-10-2018 IPR035906 MetI-like superfamily Atu4071 574bee300eee0334e3722cb4023e15d5 346 PIRSF PIRSF012608 1 346 7.3E-154 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 Atu4071 574bee300eee0334e3722cb4023e15d5 346 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 7 341 3.3E-109 T 14-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 Atu2787 a82ce996aaef97c80184ec9794ad74aa 68 Pfam PF08410 Domain of unknown function (DUF1737) 2 52 4.2E-29 T 14-10-2018 IPR013619 Domain of unknown function DUF1737 Atu4080 ed127107b7e043a12f94506b5d817784 256 Gene3D G3DSA:3.60.20.10 1 255 6.4E-86 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu4080 ed127107b7e043a12f94506b5d817784 256 SUPERFAMILY SSF56235 2 254 1.29E-37 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Atu4080 ed127107b7e043a12f94506b5d817784 256 Pfam PF13230 Glutamine amidotransferases class-II 27 198 6.6E-17 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 Atu0286 d5c5c008ca79abeae4cd55e556ab9b07 373 Gene3D G3DSA:1.20.1420.20 36 373 1.6E-65 T 14-10-2018 IPR038352 Imelysin-like domain superfamily Atu0286 d5c5c008ca79abeae4cd55e556ab9b07 373 Pfam PF09375 Imelysin 54 344 5.8E-49 T 14-10-2018 IPR018976 Imelysin-like domain Atu4397 0bddd359598d281ce46ca1c49e3336e1 325 Pfam PF01136 Peptidase family U32 81 322 4.6E-58 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Atu5434 5513455d131b5d581dc3aba0d2cfb6d2 307 SUPERFAMILY SSF51658 7 304 9.67E-51 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Atu5434 5513455d131b5d581dc3aba0d2cfb6d2 307 Gene3D G3DSA:3.20.20.150 1 305 7.3E-67 T 14-10-2018 Atu5434 5513455d131b5d581dc3aba0d2cfb6d2 307 Pfam PF01261 Xylose isomerase-like TIM barrel 29 259 5.9E-40 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Atu0365 195775e1f3b0ca47b13c130fc987d9cf 410 Pfam PF02646 RmuC family 100 379 4.3E-57 T 14-10-2018 IPR003798 DNA recombination RmuC Atu1861 7997c9b86d47c8e91e64762dc13f4564 327 Pfam PF03741 Integral membrane protein TerC family 78 286 1.8E-56 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Atu1861 7997c9b86d47c8e91e64762dc13f4564 327 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 12 321 4.5E-125 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Atu5166 227a863e7a3b9e78c5d43f4eed530788 232 TIGRFAM TIGR02791 VirB5: P-type DNA transfer protein VirB5 4 218 4.7E-86 T 14-10-2018 IPR014158 Type IV secretion system, VirB5 Atu5166 227a863e7a3b9e78c5d43f4eed530788 232 Pfam PF07996 Type IV secretion system proteins 26 216 9.2E-58 T 14-10-2018 IPR014158 Type IV secretion system, VirB5 Atu5166 227a863e7a3b9e78c5d43f4eed530788 232 Gene3D G3DSA:1.20.58.430 26 218 2.5E-44 T 14-10-2018 IPR023220 Type IV secretion system, VirB5-domain Atu5166 227a863e7a3b9e78c5d43f4eed530788 232 SUPERFAMILY SSF101082 26 218 1.44E-41 T 14-10-2018 Atu3549 ab4b4c68fd5ba7dd1a2ea6f8ce158b2d 445 Pfam PF04230 Polysaccharide pyruvyl transferase 70 369 5.4E-23 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase Atu3549 ab4b4c68fd5ba7dd1a2ea6f8ce158b2d 445 SUPERFAMILY SSF53756 67 366 4.71E-6 T 14-10-2018 Atu2427 17eaa6be2066523e70665644a1cdcb2f 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 284 9.0E-50 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu1744 22a9a340dd834e798148e26ee10b374f 193 Pfam PF00881 Nitroreductase family 12 169 1.4E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Atu1744 22a9a340dd834e798148e26ee10b374f 193 PIRSF PIRSF000232 2 192 3.3E-57 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Atu1744 22a9a340dd834e798148e26ee10b374f 193 Gene3D G3DSA:3.40.109.10 6 171 3.3E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu1744 22a9a340dd834e798148e26ee10b374f 193 SUPERFAMILY SSF55469 7 189 1.96E-33 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Atu8097 804c5a56aeab4511dfb1595aca0dd097 649 Pfam PF12708 Pectate lyase superfamily protein 268 385 9.7E-22 T 14-10-2018 IPR024535 Pectate lyase superfamily protein Atu8097 804c5a56aeab4511dfb1595aca0dd097 649 SUPERFAMILY SSF51126 258 635 2.09E-33 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Atu0549 58d8e08d18f2719fe411879ab3b34a6e 178 SUPERFAMILY SSF158791 107 165 8.89E-7 T 14-10-2018 Atu3313 ba3041389943cac4c91383a00cff9a4a 167 Pfam PF06191 Protein of unknown function (DUF995) 15 152 2.6E-52 T 14-10-2018 IPR009337 Protein of unknown function DUF995 Atu4258 3190e9c3b64088bef945b2ffaf6115c7 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.2E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4258 3190e9c3b64088bef945b2ffaf6115c7 307 SUPERFAMILY SSF161098 89 293 1.41E-15 T 14-10-2018 IPR035906 MetI-like superfamily Atu4258 3190e9c3b64088bef945b2ffaf6115c7 307 Gene3D G3DSA:1.10.3720.10 83 298 1.9E-16 T 14-10-2018 IPR035906 MetI-like superfamily Atu2288 3135b8c3e596cbaf7771b6b3c04a276f 300 Pfam PF06904 Extensin-like protein C-terminus 120 300 3.4E-52 T 14-10-2018 IPR009683 Extensin-like, C-terminal Atu6040 ad6b642f0414e09ede9b2deee4677b68 133 Pfam PF04956 TrbC/VIRB2 family 4 100 4.8E-20 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Atu4587 6b3dd26e4fc5ced1895cca55760a9f5f 266 Gene3D G3DSA:2.40.160.20 35 266 1.4E-5 T 14-10-2018 Atu4587 6b3dd26e4fc5ced1895cca55760a9f5f 266 SUPERFAMILY SSF56925 57 266 1.44E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Atu1653 fc8ab9b84831fb008e8ba2e5ed4451e7 361 Pfam PF11064 Protein of unknown function (DUF2865) 176 276 2.1E-31 T 14-10-2018 IPR021293 Protein of unknown function DUF2865 Atu1213 e1352045cd3faca7fe6c279b129d7fb7 235 Pfam PF14247 Putative metallopeptidase 18 119 5.5E-8 T 14-10-2018 IPR025644 Putative metallopeptidase Atu1213 e1352045cd3faca7fe6c279b129d7fb7 235 Pfam PF14247 Putative metallopeptidase 134 211 1.7E-7 T 14-10-2018 IPR025644 Putative metallopeptidase Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 Pfam PF01202 Shikimate kinase 31 186 3.2E-48 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 Gene3D G3DSA:3.40.50.300 11 193 3.7E-54 T 14-10-2018 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 ProSitePatterns PS01128 Shikimate kinase signature. 78 103 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 Hamap MF_00109 Shikimate kinase [aroK]. 22 187 27.597 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 PRINTS PR01100 Shikimate kinase family signature 25 40 7.3E-21 T 14-10-2018 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 PRINTS PR01100 Shikimate kinase family signature 95 104 7.3E-21 T 14-10-2018 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 PRINTS PR01100 Shikimate kinase family signature 49 62 7.3E-21 T 14-10-2018 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 PRINTS PR01100 Shikimate kinase family signature 77 85 7.3E-21 T 14-10-2018 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 PRINTS PR01100 Shikimate kinase family signature 116 133 7.3E-21 T 14-10-2018 Atu3626 62c25d981fc3e04f8263a1991c600c9e 193 SUPERFAMILY SSF52540 24 186 1.47E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Atu3370 a3aee087cdb604c58de8ea58f594c6da 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 329 2.4E-49 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0154 4b1f188045a1d49f367c0aacb6b8096e 212 Pfam PF03458 UPF0126 domain 92 164 1.6E-17 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 Atu0154 4b1f188045a1d49f367c0aacb6b8096e 212 Pfam PF03458 UPF0126 domain 6 80 3.5E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 Atu1241 16d3aafbb5b4258e28f29156740183ab 70 Pfam PF11003 Protein of unknown function (DUF2842) 6 64 8.8E-22 T 14-10-2018 IPR021265 Protein of unknown function DUF2842 Atu4349 70ce66b23a2aedeaa2cbe08d59c80432 318 Pfam PF13503 Domain of unknown function (DUF4123) 32 161 1.1E-11 T 14-10-2018 IPR025391 Domain of unknown function DUF4123 Atu0669 8dc3462e0febbbd97ed0974cc9926d02 258 Pfam PF03734 L,D-transpeptidase catalytic domain 126 257 9.1E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Atu0669 8dc3462e0febbbd97ed0974cc9926d02 258 Gene3D G3DSA:2.40.440.10 80 258 6.2E-49 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu0669 8dc3462e0febbbd97ed0974cc9926d02 258 SUPERFAMILY SSF141523 119 258 1.57E-34 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Atu5453 734f8cd8a4e551e6cc66e3b07baf71a0 802 Pfam PF12704 MacB-like periplasmic core domain 449 628 2.1E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Atu5453 734f8cd8a4e551e6cc66e3b07baf71a0 802 Pfam PF02687 FtsX-like permease family 257 352 1.3E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu5453 734f8cd8a4e551e6cc66e3b07baf71a0 802 Pfam PF02687 FtsX-like permease family 704 791 4.5E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Atu2061 ffaada1397e1d6b94803502867bacd2d 286 SUPERFAMILY SSF53474 10 268 1.11E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2061 ffaada1397e1d6b94803502867bacd2d 286 Gene3D G3DSA:3.40.50.1820 5 269 3.8E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu2061 ffaada1397e1d6b94803502867bacd2d 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2061 ffaada1397e1d6b94803502867bacd2d 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Atu2061 ffaada1397e1d6b94803502867bacd2d 286 Pfam PF12146 Serine aminopeptidase, S33 34 254 1.2E-21 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Atu0584 58d7a5eaf4c6e810fd93799ee6384d13 175 Pfam PF10135 Rod binding protein 88 129 1.6E-9 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Atu4522 7f49db1331b8053e8a7c884a17bf2ee0 577 Gene3D G3DSA:3.40.630.10 293 570 1.9E-30 T 14-10-2018 Atu4522 7f49db1331b8053e8a7c884a17bf2ee0 577 SUPERFAMILY SSF53187 324 459 9.26E-16 T 14-10-2018 Atu6172 5c7a8c259adc7f5e75046a320d042ceb 295 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 43 232 1.9E-15 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Atu0475 a6da690c6bf6e34656f6b02ca43eeffd 234 Pfam PF10099 Anti-sigma-K factor rskA 64 228 1.4E-25 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 Atu5360 e43d2a31ceff262f1c7157f998422f04 74 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 17 24 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Atu3225 b9d1463c7ce441985eb5638d6d1bfc5e 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 305 8.3E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu6156 d354c80fff44096ce82cb9e63a913797 144 Pfam PF06903 VirK protein 26 122 2.3E-40 T 14-10-2018 IPR010694 Uncharacterised protein family VirK Atu4640 69fa7e262ae9b83592297b23768ec964 315 Pfam PF11769 Protein of unknown function (DUF3313) 56 244 4.1E-40 T 14-10-2018 IPR021747 Protein of unknown function DUF3313 Atu6160 a2387736f27ba3735ef888a6ab8293f5 59 Pfam PF01527 Transposase 15 58 1.5E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Atu6160 a2387736f27ba3735ef888a6ab8293f5 59 SUPERFAMILY SSF48295 9 58 1.78E-8 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu2267 170dea0eef76302a8a8f637ea9e8ed64 214 Pfam PF06532 Protein of unknown function (DUF1109) 11 214 2.4E-61 T 14-10-2018 IPR009495 Anti-sigma-F factor NrsF Atu5300 31f898c89c9939f84043b176cde3c273 138 Pfam PF13470 PIN domain 22 70 2.9E-8 T 14-10-2018 IPR002716 PIN domain Atu3127 5508a62387d76587237ff38c41d16b37 365 Pfam PF01757 Acyltransferase family 12 340 6.6E-18 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu1327 80a044f0507d51e060e57336d18ee127 132 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 27 130 3.3E-26 T 14-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 Atu3611 c747b5cf877bb2ef3e441ccd88dce450 309 SUPERFAMILY SSF48179 178 288 5.33E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Atu3611 c747b5cf877bb2ef3e441ccd88dce450 309 Gene3D G3DSA:3.40.50.720 4 181 7.2E-59 T 14-10-2018 Atu3611 c747b5cf877bb2ef3e441ccd88dce450 309 Gene3D G3DSA:1.10.3660.10 182 289 3.4E-35 T 14-10-2018 Atu3611 c747b5cf877bb2ef3e441ccd88dce450 309 SUPERFAMILY SSF51735 8 174 2.55E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Atu3611 c747b5cf877bb2ef3e441ccd88dce450 309 Pfam PF02153 Prephenate dehydrogenase 21 278 6.7E-76 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Atu5523 b05e8fe9ba2a2a92eb992385447f2c97 364 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 321 9.7E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu2346 f674f2916df99d1d506f1f09c2747d01 398 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 388 6.9E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu3284 d26324bd5da772b74dcaf43f7a333d54 285 SUPERFAMILY SSF161098 18 285 5.12E-68 T 14-10-2018 IPR035906 MetI-like superfamily Atu3284 d26324bd5da772b74dcaf43f7a333d54 285 Gene3D G3DSA:1.10.3720.10 15 275 5.9E-59 T 14-10-2018 IPR035906 MetI-like superfamily Atu3284 d26324bd5da772b74dcaf43f7a333d54 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 275 1.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4383 9052fd9e67cd6516d16193d0df762b79 410 Pfam PF05940 NnrS protein 30 405 4.2E-113 T 14-10-2018 IPR010266 NnrS Atu8183 115b9d4ec8f65513309bf8ad99e542c8 149 Pfam PF13801 Heavy-metal resistance 12 133 1.2E-27 T 14-10-2018 IPR025961 Heavy-metal resistance protein Atu0007 146e9748222a594cc7fe50f64ebb08cc 178 Pfam PF04186 FxsA cytoplasmic membrane protein 9 113 1.7E-30 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Atu4603 ded89ff1ccb75b764ad9d01c29c22f7c 102 SUPERFAMILY SSF48295 2 59 1.05E-11 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Atu3909 a9c7ddb02d75d5fd7787f25cefc573c0 413 Pfam PF01566 Natural resistance-associated macrophage protein 48 382 2.0E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Atu2104 1f7cf71da2f8cc77824aa710f526fe7e 133 Pfam PF03994 Domain of Unknown Function (DUF350) 79 131 2.2E-10 T 14-10-2018 IPR007140 Protein of unknown function DUF350 Atu2104 1f7cf71da2f8cc77824aa710f526fe7e 133 Pfam PF03994 Domain of Unknown Function (DUF350) 14 66 1.4E-10 T 14-10-2018 IPR007140 Protein of unknown function DUF350 Atu3295 ce6450d22a0e2608432ab6ceb705051a 170 Pfam PF07886 BA14K-like protein 139 167 4.6E-13 T 14-10-2018 IPR012413 BA14k family GO:0009405 Atu0991 cbf1e16cb37dae2cccd901c8ec6d882c 306 Pfam PF01545 Cation efflux family 8 216 1.5E-38 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Atu0991 cbf1e16cb37dae2cccd901c8ec6d882c 306 Gene3D G3DSA:1.20.1510.10 5 216 6.6E-21 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu0991 cbf1e16cb37dae2cccd901c8ec6d882c 306 SUPERFAMILY SSF161111 5 214 1.28E-31 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Atu0119 aa3a2383ae66b4d3e43db222a7aad328 70 Hamap MF_00715 Protein SlyX [slyX]. 4 70 15.023 T 14-10-2018 IPR007236 SlyX Atu0119 aa3a2383ae66b4d3e43db222a7aad328 70 Pfam PF04102 SlyX 6 70 1.4E-19 T 14-10-2018 IPR007236 SlyX Atu2415 6e1d60020f220ef79d1ee10d5bb833db 65 Pfam PF10931 Protein of unknown function (DUF2735) 9 58 2.0E-19 T 14-10-2018 IPR021232 Protein of unknown function DUF2735 Atu6023 ba73c02f2dbb6d0b0f3a2ed8fbc3c0da 651 Pfam PF02538 Hydantoinase B/oxoprolinase 2 528 9.8E-129 T 14-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Atu2220 c761a89a7d1fa017df3ac82b6b2514ae 496 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 228 2.5E-21 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Atu0224 0e65cacd8cb05c64f40168ffb7763e52 63 Pfam PF04964 Flp/Fap pilin component 8 53 2.6E-22 T 14-10-2018 IPR007047 Flp/Fap pilin component Atu3036 cd3b45cb6dcd6746bd4b46f0c289fb60 342 Gene3D G3DSA:1.10.3720.10 87 342 3.0E-17 T 14-10-2018 IPR035906 MetI-like superfamily Atu3036 cd3b45cb6dcd6746bd4b46f0c289fb60 342 SUPERFAMILY SSF161098 96 338 1.96E-12 T 14-10-2018 IPR035906 MetI-like superfamily Atu3036 cd3b45cb6dcd6746bd4b46f0c289fb60 342 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 338 1.9E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu4811 e11110d6663f145389bb1f0cd9ee2531 381 Pfam PF00953 Glycosyl transferase family 4 75 233 9.8E-29 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Atu0466 388b1942bd8d4dc834d64c0a3f963f3b 119 Pfam PF14076 Domain of unknown function (DUF4258) 29 105 9.7E-11 T 14-10-2018 IPR025354 Protein of unknown function DUF4258 Atu5541 f8b38f819bf2ff974363aa05e5a56457 649 Pfam PF04632 Fusaric acid resistance protein family 1 614 7.0E-140 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 Atu1910 e1148ab550489427cda5220741f504ec 282 Pfam PF06904 Extensin-like protein C-terminus 105 281 2.6E-53 T 14-10-2018 IPR009683 Extensin-like, C-terminal Atu6099 4602529ace97686b6c866d33a0f3e833 200 Pfam PF07215 Protein of unknown function (DUF1419) 2 111 7.3E-60 T 14-10-2018 IPR009862 Protein of unknown function DUF1419 Atu0645 a2431c01d0061f27120821efeb5eaf90 164 Pfam PF04463 Protein of unknown function (DUF523) 8 152 2.4E-41 T 14-10-2018 IPR007553 Domain of unknown function DUF523 Atu2746 c5187b4a0729920def0bfcedb2972cf8 228 Pfam PF06242 Protein of unknown function (DUF1013) 29 166 6.9E-67 T 14-10-2018 IPR010421 Protein of unknown function DUF1013 Atu2069 a77ede90d2e17e1512570890b44c8037 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 98 1.7E-13 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Atu5540 363413fbd8962288a33be12a9a15b089 69 Pfam PF07869 Protein of unknown function (DUF1656) 5 58 5.1E-18 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 Atu5524 638cf2f029164e577a28c6af048a2ed9 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 284 2.8E-26 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu8156 96097d0daad30565ee29cffebe336042 252 Pfam PF03591 AzlC protein 29 160 1.3E-12 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease Atu3214 3ad38955c373579cea1b025ecad8732b 276 SUPERFAMILY SSF161098 70 256 1.31E-25 T 14-10-2018 IPR035906 MetI-like superfamily Atu3214 3ad38955c373579cea1b025ecad8732b 276 Gene3D G3DSA:1.10.3720.10 65 270 5.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily Atu3214 3ad38955c373579cea1b025ecad8732b 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 269 4.0E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Atu2629 9deb98de7a94fe3529813b362e6afae0 365 Pfam PF01963 TraB family 90 363 1.7E-67 T 14-10-2018 IPR002816 Pheromone shutdown, TraB Atu0577 4e2cebcb2802cb9087175973dbbb986b 114 Pfam PF07309 Flagellar protein FlaF 2 113 2.8E-32 T 14-10-2018 IPR010845 Flagellar FlaF GO:0044781 Atu2471 a267aff932b5eb10eeda3a97b89bf807 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 2.4E-142 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Atu1323 8b3bf5bb26c00db5374734510a87d594 137 Pfam PF06961 Protein of unknown function (DUF1294) 42 96 5.0E-23 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 Atu0318 a14e5819f790603b8b06c2aff9fd4958 304 Pfam PF04116 Fatty acid hydroxylase superfamily 125 258 4.1E-27 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 Atu1478 1470775b0349cfc038f9b55f009aef59 136 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 4 132 2.4E-44 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 Atu3641 3b116b0bdf2db176cffa2bf45ee82185 369 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 336 2.2E-86 T 14-10-2018 IPR018683 Domain of unknown function DUF2169 Atu6171 6da7affa61937d9d1220a9150fe2f756 220 ProDom PD023267 PLASMID VIRB5 PRECURSOR CROWN TUMOR SIGNAL GALL RIORF157 TYPE TIORF145 1 220 3.0E-95 T 14-10-2018 Atu0138 769131c7eace5463a19ef9e4980d4f34 276 Pfam PF02104 SURF1 family 49 253 2.4E-41 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Atu1852 24e1ceb66620b9acc04d2eaa93ce1343 382 SUPERFAMILY SSF53474 197 315 1.94E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu4767 3d3454b7fb9c1cefc655f015167904e2 132 Gene3D G3DSA:2.60.40.2420 39 130 6.4E-25 T 14-10-2018 Atu2356 df17b16e981bd3c717a7d5f785c9eaf4 477 Pfam PF04932 O-Antigen ligase 216 360 3.3E-7 T 14-10-2018 IPR007016 O-antigen ligase-related Atu3254 cb24906b9f44cd2d088b98442378f615 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 44 173 4.1E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Atu2175 7a149cc5efae834fcd62b553eaf1db02 305 Pfam PF04228 Putative neutral zinc metallopeptidase 1 301 1.2E-128 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Atu0680 12c42b7bd80bef948d069ec826416921 163 Pfam PF07681 DoxX 23 104 1.3E-20 T 14-10-2018 IPR032808 DoxX family Atu5018 09cf5103378445204ae9b5e4652c8467 274 Pfam PF11185 Protein of unknown function (DUF2971) 100 199 8.6E-11 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 Atu2616 192d0d65f1e56c8c0b7856fb3cbe6913 1386 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1038 1386 2.8E-57 T 14-10-2018 IPR007452 Translocation and assembly module TamB Atu4862 d0c313c76e141a0a8ac9071e2c455440 498 Pfam PF00665 Integrase core domain 119 245 1.6E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Atu8201 c07fbd0d98d764494dabf557f10e2ea9 65 Pfam PF09926 Uncharacterized small protein (DUF2158) 6 56 1.0E-17 T 14-10-2018 IPR019226 Protein of unknown function DUF2158 Atu0491 cd14b4928bd66b437ac38f86ad56832a 213 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 28 201 1.4E-27 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Atu8152 5b718c599c773eddcba915091ec3fc12 102 Pfam PF12096 Protein of unknown function (DUF3572) 13 94 1.7E-31 T 14-10-2018 IPR021955 Protein of unknown function DUF3572 Atu4026 581334cd472b22c8f3dfbe1c7c913f85 175 Pfam PF06186 Protein of unknown function (DUF992) 35 172 3.5E-50 T 14-10-2018 IPR009333 Protein of unknown function DUF992 Atu4127 ab7024e454b4894ed0d249dab9613c03 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 296 2.2E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu5140 7811985a61b6f8b6e396883d2a1cccf8 238 Gene3D G3DSA:3.40.50.150 7 236 2.3E-27 T 14-10-2018 Atu5140 7811985a61b6f8b6e396883d2a1cccf8 238 Pfam PF08242 Methyltransferase domain 55 150 4.3E-11 T 14-10-2018 IPR013217 Methyltransferase type 12 Atu5140 7811985a61b6f8b6e396883d2a1cccf8 238 SUPERFAMILY SSF53335 13 232 1.97E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Atu4405 e3c8b2b04f6b30640533f403bc6c2acf 61 Pfam PF06796 Periplasmic nitrate reductase protein NapE 13 58 1.5E-20 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE Atu4405 e3c8b2b04f6b30640533f403bc6c2acf 61 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 16 57 6.8E-23 T 14-10-2018 IPR004448 Nitrate reductas, NapE, periplasmic Atu2284 99e1c17c5204ec1fdc4d320347137fdc 385 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 159 277 5.9E-9 T 14-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Atu2284 99e1c17c5204ec1fdc4d320347137fdc 385 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 290 384 1.3E-6 T 14-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Atu0923 b3d3a2af85e942288769ef1d85e50b9a 314 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 70 118 1.5E-8 T 14-10-2018 IPR019285 Protein of unknown function DUF2336 Atu4356 50977a00fd3890b5b63150fc2f61789e 338 Pfam PF07182 Protein of unknown function (DUF1402) 23 320 1.5E-152 T 14-10-2018 IPR009842 Protein of unknown function DUF1402 Atu4395 df62174f575ac684d6df141565a2134b 116 Pfam PF04343 Protein of unknown function, DUF488 5 113 1.7E-33 T 14-10-2018 IPR007438 Protein of unknown function DUF488 Atu4713 cab3af296124108ff359d0099d89209b 189 SUPERFAMILY SSF101756 61 143 3.14E-13 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily Atu0247 5986f42cafae53320c7153f8e19c2ded 357 PIRSF PIRSF031982 1 357 2.3E-108 T 14-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL Atu0247 5986f42cafae53320c7153f8e19c2ded 357 SUPERFAMILY SSF53474 7 316 8.43E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Atu3080 eacb97a606793d23b7ac31b6cb2c9652 407 Pfam PF07394 Protein of unknown function (DUF1501) 39 369 1.8E-38 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 Atu0216 06c19cf0dd6adbed1b1013b74b65660a 328 Pfam PF00482 Type II secretion system (T2SS), protein F 189 317 8.1E-23 T 14-10-2018 IPR018076 Type II secretion system F domain Atu1366 67ed663b3e36cc5a1b209decaf79e42c 113 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 106 8.6E-12 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Atu1222 33c210fd2eb27a03afa11b8194cd9516 243 Pfam PF11154 Protein of unknown function (DUF2934) 113 149 2.9E-12 T 14-10-2018 IPR021327 Protein of unknown function DUF2934 Atu4747 7c5f7b8c9d27622faeb74aa009f9c0c1 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 314 1.8E-33 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Atu0449 0904cb22a6d8a99e92642936be5f5e9b 406 Pfam PF13730 Helix-turn-helix domain 22 76 9.5E-8 T 14-10-2018 Atu3258 eed9592593087f35e302b9d7e003472d 140 PIRSF PIRSF033367 24 140 2.2E-43 T 14-10-2018 IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170 Atu0643 2c12323784527b4405cb1f1dc7b7d08b 645 Pfam PF09972 Predicted membrane protein (DUF2207) 27 449 2.3E-71 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Atu0643 2c12323784527b4405cb1f1dc7b7d08b 645 Pfam PF09972 Predicted membrane protein (DUF2207) 457 565 7.0E-20 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Atu0759 159a73eff9ae72075cf04f553d1b16db 149 Pfam PF16998 17 kDa outer membrane surface antigen 38 148 3.9E-38 T 14-10-2018 IPR032635 Surface antigen domain Atu0853 3b0a1210e4331a391556548846991b45 242 Pfam PF05988 Bacterial protein of unknown function (DUF899) 2 231 1.4E-88 T 14-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like Atu5104 f70e77f30ef0d5a79896201213d5378e 181 Pfam PF05284 Protein of unknown function (DUF736) 82 177 7.1E-31 T 14-10-2018 IPR007948 Protein of unknown function DUF736 Atu1710 60cc9fc82d74d8b7a58c3007ff1e8f9e 1008 SUPERFAMILY SSF110997 927 1006 1.26E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Atu1710 60cc9fc82d74d8b7a58c3007ff1e8f9e 1008 Pfam PF05036 Sporulation related domain 928 1006 1.3E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 Atu2827 bd69cdaebb1047793ac12d4fd1f0cb1e 70 Pfam PF07896 Protein of unknown function (DUF1674) 26 70 8.1E-12 T 14-10-2018 IPR012875 Protein of unknown function DUF1674 Atu8095 da845b3025d567fee075229c1054ed49 333 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 31 331 1.3E-65 T 14-10-2018 IPR018666 Protein of unknown function DUF2125 Atu1981 92fd398f33bd667e1bde6037ab99d33c 143 Pfam PF09945 Predicted membrane protein (DUF2177) 4 126 8.6E-45 T 14-10-2018 IPR018687 Protein of unknown function DUF2177, membrane Atu4056 e39d1210760a66bcf6046f20ad8e70ff 382 Pfam PF01757 Acyltransferase family 11 328 1.5E-30 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Atu0510 1c19a3a386790542ffc4a633d148dd91 547 Pfam PF00361 Proton-conducting membrane transporter 138 436 8.6E-36 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Atu6191 19d179cab81a7c85656c84c09721560d 684 PIRSF PIRSF036105 1 684 0.0 T 14-10-2018 IPR009550 VirE3 Atu6191 19d179cab81a7c85656c84c09721560d 684 Pfam PF06661 VirE3 43 354 1.9E-200 T 14-10-2018 IPR009550 VirE3 Atu8187 1dc56b4b661d85dd585e7174bb4daae5 299 Pfam PF17038 Cellulose biosynthesis protein BcsN 1 299 5.1E-213 T 14-10-2018 IPR031482 Cellulose biosynthesis protein BcsN Atu0650 01898800a4979963d0b916a739ffc717 266 Pfam PF06629 MltA-interacting protein MipA 35 261 2.1E-40 T 14-10-2018 IPR010583 MltA-interacting MipA Atu1148 bdbb3d49019a8e3ef99186604a4b96ed 452 Pfam PF13449 Esterase-like activity of phytase 89 423 2.6E-61 T 14-10-2018 IPR027372 Phytase-like domain Atu0538 15ed4f1a2c1bd442794994393e18fc93 146 Pfam PF11164 Protein of unknown function (DUF2948) 4 142 7.0E-52 T 14-10-2018 IPR021335 Protein of unknown function DUF2948 Atu3918 91749013b8f071e0d212b0c6865cebb6 399 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 27 385 4.9E-99 T 14-10-2018 IPR010640 Low temperature requirement A Atu0480 00b459771d6ff2998ae8e097c97604f8 400 Pfam PF01943 Polysaccharide biosynthesis protein 5 238 2.1E-11 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Atu1328 fbf73fe6bed9530d94240fcbd1591dd7 145 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 40 131 1.6E-36 T 14-10-2018 IPR019225 Protein of unknown function DUF2155 Atu8115 75d7a75029018c65d9716fc53f8809cc 164 Pfam PF10947 Protein of unknown function (DUF2628) 18 89 3.0E-8 T 14-10-2018 IPR024399 Protein of unknown function DUF2628 Atu8139 44ab2b688061ef06acfd918fc8c1dd8b 265 Pfam PF12570 Protein of unknown function (DUF3750) 70 198 8.6E-45 T 14-10-2018 IPR022224 Protein of unknown function DUF3750 Atu3332 3533a2f9c30ee3fad1d89d14dc463056 328 SUPERFAMILY SSF141523 43 164 3.79E-8 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like