locus-tag class description J5285_00015 PF01183 Glycosyl hydrolases family 25 J5285_00025 PF02219 Methylenetetrahydrofolate reductase J5285_00030 PF13847 Methyltransferase domain J5285_00030 PF03551 Transcriptional regulator PadR-like family J5285_00035 PF00672 HAMP domain J5285_00035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_00040 PF00005 ABC transporter J5285_00040 PF12848 ABC transporter J5285_00045 PF00561 alpha/beta hydrolase fold J5285_00050 PF02515 CoA-transferase family III J5285_00055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5285_00055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5285_00055 PF00205 Thiamine pyrophosphate enzyme, central domain J5285_00080 PF03734 L,D-transpeptidase catalytic domain J5285_00080 PF01476 LysM domain J5285_00085 PF07690 Major Facilitator Superfamily J5285_00090 PF00440 Bacterial regulatory proteins, tetR family J5285_00095 PF10609 NUBPL iron-transfer P-loop NTPase J5285_00105 PF00465 Iron-containing alcohol dehydrogenase J5285_00110 PF00171 Aldehyde dehydrogenase family J5285_00115 PF00120 Glutamine synthetase, catalytic domain J5285_00115 PF03951 Glutamine synthetase, beta-Grasp domain J5285_00120 PF13520 Amino acid permease J5285_00150 PF08402 TOBE domain J5285_00150 PF00005 ABC transporter J5285_00155 PF00107 Zinc-binding dehydrogenase J5285_00155 PF08240 Alcohol dehydrogenase GroES-like domain J5285_00160 PF00005 ABC transporter J5285_00170 PF07690 Major Facilitator Superfamily J5285_00180 PF01380 SIS domain J5285_00185 PF12804 MobA-like NTP transferase domain J5285_00185 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_00185 PF14602 Hexapeptide repeat of succinyl-transferase J5285_00195 PF08240 Alcohol dehydrogenase GroES-like domain J5285_00195 PF00107 Zinc-binding dehydrogenase J5285_00200 PF02310 B12 binding domain J5285_00200 PF02607 B12 binding domain J5285_00200 PF02965 Vitamin B12 dependent methionine synthase, activation domain J5285_00200 PF00809 Pterin binding enzyme J5285_00200 PF02574 Homocysteine S-methyltransferase J5285_00230 PF04402 Protein of unknown function (DUF541) J5285_00240 PF01894 Uncharacterised protein family UPF0047 J5285_00245 PF00360 Phytochrome region J5285_00245 PF00512 His Kinase A (phospho-acceptor) domain J5285_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_00245 PF08446 PAS fold J5285_00245 PF01590 GAF domain J5285_00255 PF03979 Sigma-70 factor, region 1.1 J5285_00255 PF04545 Sigma-70, region 4 J5285_00255 PF04539 Sigma-70 region 3 J5285_00255 PF04542 Sigma-70 region 2 J5285_00255 PF00140 Sigma-70 factor, region 1.2 J5285_00255 PF04546 Sigma-70, non-essential region J5285_00260 PF10410 DnaB-helicase binding domain of primase J5285_00260 PF08275 DNA primase catalytic core, N-terminal domain J5285_00260 PF01807 CHC2 zinc finger J5285_00260 PF08278 DNA primase DnaG DnaB-binding J5285_00280 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J5285_00280 PF00117 Glutamine amidotransferase class-I J5285_00285 PF01554 MatE J5285_00290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_00290 PF00672 HAMP domain J5285_00290 PF02743 Cache domain J5285_00300 PF04228 Putative neutral zinc metallopeptidase J5285_00310 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J5285_00310 PF02142 MGS-like domain J5285_00310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_00315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5285_00320 PF07690 Major Facilitator Superfamily J5285_00330 PF03167 Uracil DNA glycosylase superfamily J5285_00340 PF01272 Transcription elongation factor, GreA/GreB, C-term J5285_00340 PF03449 Transcription elongation factor, N-terminal J5285_00345 PF00534 Glycosyl transferases group 1 J5285_00350 PF13439 Glycosyltransferase Family 4 J5285_00350 PF00534 Glycosyl transferases group 1 J5285_00355 PF13439 Glycosyltransferase Family 4 J5285_00355 PF00534 Glycosyl transferases group 1 J5285_00360 PF00535 Glycosyl transferase family 2 J5285_00370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J5285_00375 PF16363 GDP-mannose 4,6 dehydratase J5285_00380 PF04321 RmlD substrate binding domain J5285_00385 PF00483 Nucleotidyl transferase J5285_00395 PF01037 Lrp/AsnC ligand binding domain J5285_00400 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_00405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_00405 PF03466 LysR substrate binding domain J5285_00415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5285_00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_00425 PF03466 LysR substrate binding domain J5285_00435 PF01699 Sodium/calcium exchanger protein J5285_00445 PF00155 Aminotransferase class I and II J5285_00450 PF05231 MASE1 J5285_00450 PF00563 EAL domain J5285_00465 PF00313 'Cold-shock' DNA-binding domain J5285_00475 PF00753 Metallo-beta-lactamase superfamily J5285_00485 PF12802 MarR family J5285_00490 PF00072 Response regulator receiver domain J5285_00490 PF00486 Transcriptional regulatory protein, C terminal J5285_00495 PF00672 HAMP domain J5285_00495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_00495 PF00512 His Kinase A (phospho-acceptor) domain J5285_00495 PF16527 Two-component sensor protein CpxA, periplasmic domain J5285_00500 PF01588 Putative tRNA binding domain J5285_00505 PF14748 Pyrroline-5-carboxylate reductase dimerisation J5285_00505 PF03807 NADP oxidoreductase coenzyme F420-dependent J5285_00520 PF01790 Prolipoprotein diacylglyceryl transferase J5285_00530 PF02578 Multi-copper polyphenol oxidoreductase laccase J5285_00545 PF14572 Phosphoribosyl synthetase-associated domain J5285_00545 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J5285_00555 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J5285_00560 PF00171 Aldehyde dehydrogenase family J5285_00565 PF02954 Bacterial regulatory protein, Fis family J5285_00565 PF13426 PAS domain J5285_00565 PF00158 Sigma-54 interaction domain J5285_00570 PF00563 EAL domain J5285_00570 PF00990 Diguanylate cyclase, GGDEF domain J5285_00570 PF03707 Bacterial signalling protein N terminal repeat J5285_00570 PF13188 PAS domain J5285_00580 PF01386 Ribosomal L25p family J5285_00580 PF14693 Ribosomal protein TL5, C-terminal domain J5285_00585 PF00563 EAL domain J5285_00585 PF00990 Diguanylate cyclase, GGDEF domain J5285_00585 PF03707 Bacterial signalling protein N terminal repeat J5285_00595 PF01195 Peptidyl-tRNA hydrolase J5285_00615 PF01926 50S ribosome-binding GTPase J5285_00615 PF06071 Protein of unknown function (DUF933) J5285_00645 PF00156 Phosphoribosyl transferase domain J5285_00650 PF02167 Cytochrome C1 family J5285_00650 PF00032 Cytochrome b(C-terminal)/b6/petD J5285_00650 PF00033 Cytochrome b/b6/petB J5285_00655 PF00033 Cytochrome b/b6/petB J5285_00655 PF00032 Cytochrome b(C-terminal)/b6/petD J5285_00660 PF00355 Rieske [2Fe-2S] domain J5285_00660 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J5285_00670 PF00005 ABC transporter J5285_00670 PF00664 ABC transporter transmembrane region J5285_00675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_00675 PF00672 HAMP domain J5285_00675 PF02203 Tar ligand binding domain homologue J5285_00680 PF00005 ABC transporter J5285_00680 PF00664 ABC transporter transmembrane region J5285_00685 PF00588 SpoU rRNA Methylase family J5285_00690 PF02690 Na+/Pi-cotransporter J5285_00710 PF01218 Coproporphyrinogen III oxidase J5285_00725 PF13735 tRNA nucleotidyltransferase domain 2 putative J5285_00725 PF12627 Probable RNA and SrmB- binding site of polymerase A J5285_00725 PF01743 Poly A polymerase head domain J5285_00730 PF00293 NUDIX domain J5285_00740 PF17863 AAA lid domain J5285_00740 PF07726 ATPase family associated with various cellular activities (AAA) J5285_00760 PF00583 Acetyltransferase (GNAT) family J5285_00770 PF07690 Major Facilitator Superfamily J5285_00780 PF13409 Glutathione S-transferase, N-terminal domain J5285_00785 PF00293 NUDIX domain J5285_00795 PF00665 Integrase core domain J5285_00800 PF00682 HMGL-like J5285_00800 PF08502 LeuA allosteric (dimerisation) domain J5285_00810 PF03594 Benzoate membrane transport protein J5285_00825 PF00271 Helicase conserved C-terminal domain J5285_00825 PF00270 DEAD/DEAH box helicase J5285_00830 PF00672 HAMP domain J5285_00830 PF00512 His Kinase A (phospho-acceptor) domain J5285_00830 PF01627 Hpt domain J5285_00830 PF00072 Response regulator receiver domain J5285_00830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J5285_00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_00835 PF07681 DoxX J5285_00845 PF03734 L,D-transpeptidase catalytic domain J5285_00845 PF17969 L,D-transpeptidase C-terminal domain J5285_00850 PF14403 Circularly permuted ATP-grasp type 2 J5285_00855 PF14403 Circularly permuted ATP-grasp type 2 J5285_00855 PF04168 A predicted alpha-helical domain with a conserved ER motif. J5285_00860 PF08379 Bacterial transglutaminase-like N-terminal region J5285_00860 PF01841 Transglutaminase-like superfamily J5285_00880 PF02653 Branched-chain amino acid transport system / permease component J5285_00885 PF00005 ABC transporter J5285_00890 PF13407 Periplasmic binding protein domain J5285_00895 PF03466 LysR substrate binding domain J5285_00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_00910 PF00480 ROK family J5285_00915 PF13407 Periplasmic binding protein domain J5285_00920 PF02653 Branched-chain amino acid transport system / permease component J5285_00925 PF00005 ABC transporter J5285_00930 PF12802 MarR family J5285_00975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5285_00975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5285_00975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5285_00975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5285_00980 PF01152 Bacterial-like globin J5285_00995 PF08362 YcdC-like protein, C-terminal region J5285_00995 PF00440 Bacterial regulatory proteins, tetR family J5285_01000 PF00529 HlyD membrane-fusion protein of T1SS J5285_01000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_01005 PF00873 AcrB/AcrD/AcrF family J5285_01010 PF00027 Cyclic nucleotide-binding domain J5285_01010 PF13545 Crp-like helix-turn-helix domain J5285_01015 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5285_01020 PF01730 UreF J5285_01025 PF02814 UreE urease accessory protein, N-terminal domain J5285_01025 PF05194 UreE urease accessory protein, C-terminal domain J5285_01030 PF00990 Diguanylate cyclase, GGDEF domain J5285_01035 PF08534 Redoxin J5285_01040 PF00449 Urease alpha-subunit, N-terminal domain J5285_01040 PF01979 Amidohydrolase family J5285_01045 PF07007 Lysozyme inhibitor LprI J5285_01055 PF00699 Urease beta subunit J5285_01060 PF06906 Protein of unknown function (DUF1272) J5285_01065 PF00547 Urease, gamma subunit J5285_01070 PF01774 UreD urease accessory protein J5285_01080 PF00005 ABC transporter J5285_01090 PF00005 ABC transporter J5285_01090 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_01100 PF02653 Branched-chain amino acid transport system / permease component J5285_01115 PF00120 Glutamine synthetase, catalytic domain J5285_01115 PF03951 Glutamine synthetase, beta-Grasp domain J5285_01120 PF18415 Histidine kinase receptor ArcB trans-membrane domain J5285_01120 PF00072 Response regulator receiver domain J5285_01120 PF00989 PAS fold J5285_01120 PF00512 His Kinase A (phospho-acceptor) domain J5285_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_01120 PF01627 Hpt domain J5285_01125 PF00072 Response regulator receiver domain J5285_01135 PF03668 P-loop ATPase protein family J5285_01140 PF13458 Periplasmic binding protein J5285_01150 PF00005 ABC transporter J5285_01155 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_01155 PF00005 ABC transporter J5285_01160 PF02653 Branched-chain amino acid transport system / permease component J5285_01160 PF11862 Domain of unknown function (DUF3382) J5285_01165 PF02653 Branched-chain amino acid transport system / permease component J5285_01170 PF00459 Inositol monophosphatase family J5285_01200 PF00072 Response regulator receiver domain J5285_01200 PF00486 Transcriptional regulatory protein, C terminal J5285_01215 PF10090 Histidine phosphotransferase C-terminal domain J5285_01240 PF00709 Adenylosuccinate synthetase J5285_01250 PF04545 Sigma-70, region 4 J5285_01250 PF04542 Sigma-70 region 2 J5285_01250 PF00140 Sigma-70 factor, region 1.2 J5285_01260 PF00849 RNA pseudouridylate synthase J5285_01270 PF00588 SpoU rRNA Methylase family J5285_01285 PF01609 Transposase DDE domain J5285_01290 PF00574 Clp protease J5285_01295 PF04955 HupE / UreJ protein J5285_01300 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) J5285_01305 PF14489 QueF-like protein J5285_01310 PF16916 Dimerisation domain of Zinc Transporter J5285_01310 PF01545 Cation efflux family J5285_01320 PF01810 LysE type translocator J5285_01330 PF00665 Integrase core domain J5285_01335 PF04715 Anthranilate synthase component I, N terminal region J5285_01335 PF00425 chorismate binding enzyme J5285_01335 PF00117 Glutamine amidotransferase class-I J5285_01345 PF07715 TonB-dependent Receptor Plug Domain J5285_01345 PF00593 TonB dependent receptor J5285_01350 PF03350 Uncharacterized protein family, UPF0114 J5285_01355 PF03472 Autoinducer binding domain J5285_01355 PF00196 Bacterial regulatory proteins, luxR family J5285_01370 PF00127 Copper binding proteins, plastocyanin/azurin family J5285_01375 PF00265 Thymidine kinase J5285_01380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J5285_01385 PF00528 Binding-protein-dependent transport system inner membrane component J5285_01390 PF00005 ABC transporter J5285_01390 PF00571 CBS domain J5285_01395 PF01022 Bacterial regulatory protein, arsR family J5285_01405 PF13458 Periplasmic binding protein J5285_01410 PF01979 Amidohydrolase family J5285_01410 PF13382 Adenine deaminase C-terminal domain J5285_01415 PF01966 HD domain J5285_01415 PF11871 Domain of unknown function (DUF3391) J5285_01420 PF00128 Alpha amylase, catalytic domain J5285_01425 PF00294 pfkB family carbohydrate kinase J5285_01440 PF01609 Transposase DDE domain J5285_01445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J5285_01445 PF01926 50S ribosome-binding GTPase J5285_01470 PF05992 SbmA/BacA-like family J5285_01475 PF00557 Metallopeptidase family M24 J5285_01490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5285_01490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5285_01500 PF00111 2Fe-2S iron-sulfur cluster binding domain J5285_01500 PF01799 [2Fe-2S] binding domain J5285_01505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J5285_01505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5285_01515 PF05973 Phage derived protein Gp49-like (DUF891) J5285_01520 PF01381 Helix-turn-helix J5285_01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_01530 PF03466 LysR substrate binding domain J5285_01540 PF01979 Amidohydrolase family J5285_01545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_01545 PF00672 HAMP domain J5285_01550 PF01070 FMN-dependent dehydrogenase J5285_01555 PF07943 Penicillin-binding protein 5, C-terminal domain J5285_01555 PF00768 D-alanyl-D-alanine carboxypeptidase J5285_01560 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system J5285_01575 PF00576 HIUase/Transthyretin family J5285_01580 PF04115 Ureidoglycolate lyase J5285_01605 PF06299 Protein of unknown function (DUF1045) J5285_01610 PF01266 FAD dependent oxidoreductase J5285_01610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J5285_01615 PF01266 FAD dependent oxidoreductase J5285_01615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J5285_01625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_01645 PF03167 Uracil DNA glycosylase superfamily J5285_01650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_01655 PF04304 Protein of unknown function (DUF454) J5285_01660 PF00005 ABC transporter J5285_01665 PF01032 FecCD transport family J5285_01670 PF01497 Periplasmic binding protein J5285_01680 PF06228 Haem utilisation ChuX/HutX J5285_01685 PF00551 Formyl transferase J5285_01695 PF00512 His Kinase A (phospho-acceptor) domain J5285_01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_01700 PF00486 Transcriptional regulatory protein, C terminal J5285_01700 PF00072 Response regulator receiver domain J5285_01710 PF03401 Tripartite tricarboxylate transporter family receptor J5285_01720 PF01970 Tripartite tricarboxylate transporter TctA family J5285_01730 PF00210 Ferritin-like domain J5285_01750 PF00700 Bacterial flagellin C-terminal helical region J5285_01750 PF00669 Bacterial flagellin N-terminal helical region J5285_01780 PF01842 ACT domain J5285_01780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_01780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5285_01790 PF13505 Outer membrane protein beta-barrel domain J5285_01795 PF13188 PAS domain J5285_01795 PF03707 Bacterial signalling protein N terminal repeat J5285_01795 PF00990 Diguanylate cyclase, GGDEF domain J5285_01795 PF00563 EAL domain J5285_01800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5285_01800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5285_01800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5285_01800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5285_01805 PF00004 ATPase family associated with various cellular activities (AAA) J5285_01805 PF17862 AAA+ lid domain J5285_01805 PF06480 FtsH Extracellular J5285_01805 PF01434 Peptidase family M41 J5285_01810 PF01171 PP-loop family J5285_01820 PF00691 OmpA family J5285_01825 PF07676 WD40-like Beta Propeller Repeat J5285_01825 PF04052 TolB amino-terminal domain J5285_01835 PF02472 Biopolymer transport protein ExbD/TolR J5285_01840 PF01618 MotA/TolQ/ExbB proton channel family J5285_01845 PF03061 Thioesterase superfamily J5285_01850 PF00293 NUDIX domain J5285_01855 PF00293 NUDIX domain J5285_01870 PF10518 TAT (twin-arginine translocation) pathway signal sequence J5285_01870 PF00149 Calcineurin-like phosphoesterase J5285_01875 PF17864 RuvB AAA lid domain J5285_01875 PF05491 RuvB C-terminal winged helix domain J5285_01875 PF05496 Holliday junction DNA helicase RuvB P-loop domain J5285_01890 PF07499 RuvA, C-terminal domain J5285_01890 PF01330 RuvA N terminal domain J5285_01895 PF02075 Crossover junction endodeoxyribonuclease RuvC J5285_01900 PF00296 Luciferase-like monooxygenase J5285_01910 PF01709 Transcriptional regulator J5285_01925 PF13277 YmdB-like protein J5285_01935 PF00571 CBS domain J5285_01935 PF03471 Transporter associated domain J5285_01935 PF01595 Cyclin M transmembrane N-terminal domain J5285_01955 PF00583 Acetyltransferase (GNAT) family J5285_01970 PF02779 Transketolase, pyrimidine binding domain J5285_01970 PF02780 Transketolase, C-terminal domain J5285_01970 PF00456 Transketolase, thiamine diphosphate binding domain J5285_01975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J5285_01975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J5285_01985 PF01381 Helix-turn-helix J5285_01995 PF03471 Transporter associated domain J5285_01995 PF00999 Sodium/hydrogen exchanger family J5285_01995 PF02080 TrkA-C domain J5285_02000 PF00162 Phosphoglycerate kinase J5285_02005 PF00274 Fructose-bisphosphate aldolase class-I J5285_02040 PF01197 Ribosomal protein L31 J5285_02045 PF00005 ABC transporter J5285_02045 PF00664 ABC transporter transmembrane region J5285_02050 PF00890 FAD binding domain J5285_02055 PF02798 Glutathione S-transferase, N-terminal domain J5285_02055 PF00043 Glutathione S-transferase, C-terminal domain J5285_02065 PF00444 Ribosomal protein L36 J5285_02070 PF02222 ATP-grasp domain J5285_02070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J5285_02075 PF00731 AIR carboxylase J5285_02105 PF00459 Inositol monophosphatase family J5285_02115 PF00691 OmpA family J5285_02115 PF01389 OmpA-like transmembrane domain J5285_02125 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) J5285_02145 PF02887 Pyruvate kinase, alpha/beta domain J5285_02145 PF00224 Pyruvate kinase, barrel domain J5285_02155 PF05951 Bacterial protein of unknown function (DUF882) J5285_02160 PF02954 Bacterial regulatory protein, Fis family J5285_02160 PF00072 Response regulator receiver domain J5285_02160 PF00158 Sigma-54 interaction domain J5285_02170 PF01063 Amino-transferase class IV J5285_02175 PF00990 Diguanylate cyclase, GGDEF domain J5285_02180 PF03435 Saccharopine dehydrogenase NADP binding domain J5285_02180 PF16653 Saccharopine dehydrogenase C-terminal domain J5285_02190 PF02872 5'-nucleotidase, C-terminal domain J5285_02190 PF00149 Calcineurin-like phosphoesterase J5285_02195 PF13593 SBF-like CPA transporter family (DUF4137) J5285_02210 PF01212 Beta-eliminating lyase J5285_02220 PF00310 Glutamine amidotransferases class-II J5285_02220 PF01645 Conserved region in glutamate synthase J5285_02220 PF04898 Glutamate synthase central domain J5285_02220 PF01493 GXGXG motif J5285_02230 PF01850 PIN domain J5285_02235 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J5285_02235 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_02250 PF13406 Transglycosylase SLT domain J5285_02255 PF00483 Nucleotidyl transferase J5285_02265 PF00571 CBS domain J5285_02265 PF01380 SIS domain J5285_02270 PF00795 Carbon-nitrogen hydrolase J5285_02280 PF16200 C-terminal region of band_7 J5285_02280 PF01145 SPFH domain / Band 7 family J5285_02285 PF00762 Ferrochelatase J5285_02290 PF00011 Hsp20/alpha crystallin family J5285_02300 PF00459 Inositol monophosphatase family J5285_02310 PF00072 Response regulator receiver domain J5285_02325 PF03061 Thioesterase superfamily J5285_02345 PF04168 A predicted alpha-helical domain with a conserved ER motif. J5285_02345 PF14403 Circularly permuted ATP-grasp type 2 J5285_02350 PF08379 Bacterial transglutaminase-like N-terminal region J5285_02350 PF01841 Transglutaminase-like superfamily J5285_02360 PF00343 Carbohydrate phosphorylase J5285_02365 PF00128 Alpha amylase, catalytic domain J5285_02365 PF02806 Alpha amylase, C-terminal all-beta domain J5285_02365 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J5285_02370 PF00483 Nucleotidyl transferase J5285_02375 PF00534 Glycosyl transferases group 1 J5285_02375 PF08323 Starch synthase catalytic domain J5285_02380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J5285_02380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J5285_02380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J5285_02380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J5285_02385 PF18390 Glycogen debranching enzyme C-terminal domain J5285_02385 PF00128 Alpha amylase, catalytic domain J5285_02385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J5285_02390 PF01575 MaoC like domain J5285_02410 PF17806 Sarcosine oxidase A3 domain J5285_02410 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_02410 PF08669 Glycine cleavage T-protein C-terminal barrel domain J5285_02410 PF01571 Aminomethyltransferase folate-binding domain J5285_02425 PF01266 FAD dependent oxidoreductase J5285_02430 PF01165 Ribosomal protein S21 J5285_02440 PF02233 NAD(P) transhydrogenase beta subunit J5285_02445 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J5285_02450 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J5285_02450 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J5285_02460 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5285_02465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5285_02470 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_02475 PF07722 Peptidase C26 J5285_02480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5285_02480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_02485 PF00356 Bacterial regulatory proteins, lacI family J5285_02490 PF01047 MarR family J5285_02495 PF02633 Creatinine amidohydrolase J5285_02500 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5285_02500 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5285_02525 PF03922 OmpW family J5285_02530 PF00672 HAMP domain J5285_02530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_02540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J5285_02540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J5285_02545 PF03466 LysR substrate binding domain J5285_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_02555 PF03824 High-affinity nickel-transport protein J5285_02575 PF01081 KDPG and KHG aldolase J5285_02580 PF01928 CYTH domain J5285_02590 PF17773 UPF0176 acylphosphatase like domain J5285_02590 PF00581 Rhodanese-like domain J5285_02595 PF00356 Bacterial regulatory proteins, lacI family J5285_02600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5285_02600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5285_02605 PF01261 Xylose isomerase-like TIM barrel J5285_02610 PF00665 Integrase core domain J5285_02615 PF00881 Nitroreductase family J5285_02620 PF09383 NIL domain J5285_02620 PF00005 ABC transporter J5285_02625 PF00528 Binding-protein-dependent transport system inner membrane component J5285_02630 PF03180 NLPA lipoprotein J5285_02635 PF00563 EAL domain J5285_02635 PF00990 Diguanylate cyclase, GGDEF domain J5285_02635 PF03707 Bacterial signalling protein N terminal repeat J5285_02640 PF07690 Major Facilitator Superfamily J5285_02645 PF13533 Biotin-lipoyl like J5285_02650 PF00440 Bacterial regulatory proteins, tetR family J5285_02655 PF03741 Integral membrane protein TerC family J5285_02655 PF03471 Transporter associated domain J5285_02665 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5285_02670 PF00152 tRNA synthetases class II (D, K and N) J5285_02670 PF01336 OB-fold nucleic acid binding domain J5285_02685 PF01297 Zinc-uptake complex component A periplasmic J5285_02690 PF00005 ABC transporter J5285_02695 PF00950 ABC 3 transport family J5285_02700 PF00950 ABC 3 transport family J5285_02705 PF07043 Protein of unknown function (DUF1328) J5285_02715 PF09339 IclR helix-turn-helix domain J5285_02715 PF01614 Bacterial transcriptional regulator J5285_02720 PF00923 Transaldolase/Fructose-6-phosphate aldolase J5285_02725 PF04198 Putative sugar-binding domain J5285_02725 PF13936 Helix-turn-helix domain J5285_02735 PF01402 Ribbon-helix-helix protein, copG family J5285_02740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5285_02740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5285_02750 PF10576 Iron-sulfur binding domain of endonuclease III J5285_02750 PF00633 Helix-hairpin-helix motif J5285_02750 PF00730 HhH-GPD superfamily base excision DNA repair protein J5285_02765 PF00625 Guanylate kinase J5285_02800 PF01259 SAICAR synthetase J5285_02805 PF00440 Bacterial regulatory proteins, tetR family J5285_02810 PF00529 HlyD membrane-fusion protein of T1SS J5285_02810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_02815 PF00873 AcrB/AcrD/AcrF family J5285_02820 PF02321 Outer membrane efflux protein J5285_02825 PF08207 Elongation factor P (EF-P) KOW-like domain J5285_02825 PF09285 Elongation factor P, C-terminal J5285_02825 PF01132 Elongation factor P (EF-P) OB domain J5285_02830 PF00152 tRNA synthetases class II (D, K and N) J5285_02835 PF04055 Radical SAM superfamily J5285_02835 PF12544 Lysine-2,3-aminomutase J5285_02850 PF01266 FAD dependent oxidoreductase J5285_02860 PF00528 Binding-protein-dependent transport system inner membrane component J5285_02865 PF00005 ABC transporter J5285_02865 PF03459 TOBE domain J5285_02870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_02870 PF03459 TOBE domain J5285_02875 PF03576 Peptidase family S58 J5285_02880 PF05690 Thiazole biosynthesis protein ThiG J5285_02890 PF01266 FAD dependent oxidoreductase J5285_02895 PF01964 Radical SAM ThiC family J5285_02895 PF13667 ThiC-associated domain J5285_02900 PF00550 Phosphopantetheine attachment site J5285_02925 PF00664 ABC transporter transmembrane region J5285_02925 PF00005 ABC transporter J5285_02930 PF00027 Cyclic nucleotide-binding domain J5285_02930 PF13545 Crp-like helix-turn-helix domain J5285_02935 PF12706 Beta-lactamase superfamily domain J5285_02940 PF00211 Adenylate and Guanylate cyclase catalytic domain J5285_02940 PF00672 HAMP domain J5285_02950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J5285_02950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J5285_02950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J5285_02955 PF13439 Glycosyltransferase Family 4 J5285_02955 PF00534 Glycosyl transferases group 1 J5285_02970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_02970 PF00005 ABC transporter J5285_02975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_02980 PF00528 Binding-protein-dependent transport system inner membrane component J5285_02985 PF00528 Binding-protein-dependent transport system inner membrane component J5285_02985 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_02995 PF13439 Glycosyltransferase Family 4 J5285_02995 PF00534 Glycosyl transferases group 1 J5285_03020 PF01494 FAD binding domain J5285_03025 PF01569 PAP2 superfamily J5285_03030 PF13288 DXP reductoisomerase C-terminal domain J5285_03030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J5285_03030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J5285_03035 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment J5285_03040 PF00155 Aminotransferase class I and II J5285_03050 PF01103 Surface antigen J5285_03050 PF17243 POTRA domain TamA domain 1 J5285_03060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_03060 PF08447 PAS fold J5285_03060 PF13426 PAS domain J5285_03065 PF01584 CheW-like domain J5285_03070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_03070 PF08447 PAS fold J5285_03070 PF13426 PAS domain J5285_03075 PF07690 Major Facilitator Superfamily J5285_03080 PF13426 PAS domain J5285_03080 PF13188 PAS domain J5285_03080 PF00512 His Kinase A (phospho-acceptor) domain J5285_03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_03080 PF00989 PAS fold J5285_03085 PF02954 Bacterial regulatory protein, Fis family J5285_03085 PF00072 Response regulator receiver domain J5285_03085 PF00158 Sigma-54 interaction domain J5285_03095 PF02634 FdhD/NarQ family J5285_03100 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J5285_03105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5285_03105 PF02874 ATP synthase alpha/beta family, beta-barrel domain J5285_03110 PF00231 ATP synthase J5285_03115 PF00306 ATP synthase alpha/beta chain, C terminal domain J5285_03115 PF02874 ATP synthase alpha/beta family, beta-barrel domain J5285_03115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5285_03120 PF00213 ATP synthase delta (OSCP) subunit J5285_03130 PF17764 3′ DNA-binding domain (3′BD) J5285_03130 PF18074 Primosomal protein N C-terminal domain J5285_03130 PF00270 DEAD/DEAH box helicase J5285_03130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J5285_03135 PF00589 Phage integrase family J5285_03135 PF02899 Phage integrase, N-terminal SAM-like domain J5285_03145 PF01292 Prokaryotic cytochrome b561 J5285_03150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5285_03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_03165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5285_03165 PF00364 Biotin-requiring enzyme J5285_03165 PF02817 e3 binding domain J5285_03170 PF16078 2-oxoglutarate dehydrogenase N-terminus J5285_03170 PF00676 Dehydrogenase E1 component J5285_03170 PF16870 2-oxoglutarate dehydrogenase C-terminal J5285_03170 PF02779 Transketolase, pyrimidine binding domain J5285_03175 PF02629 CoA binding domain J5285_03175 PF00549 CoA-ligase J5285_03180 PF08442 ATP-grasp domain J5285_03180 PF00549 CoA-ligase J5285_03185 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J5285_03185 PF00056 lactate/malate dehydrogenase, NAD binding domain J5285_03190 PF03969 AFG1-like ATPase J5285_03195 PF02974 Protease inhibitor Inh J5285_03200 PF13237 4Fe-4S dicluster domain J5285_03200 PF13085 2Fe-2S iron-sulfur cluster binding domain J5285_03210 PF02910 Fumarate reductase flavoprotein C-term J5285_03210 PF00890 FAD binding domain J5285_03220 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J5285_03245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J5285_03245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J5285_03250 PF00814 Glycoprotease family J5285_03255 PF03900 Porphobilinogen deaminase, C-terminal domain J5285_03255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J5285_03280 PF00117 Glutamine amidotransferase class-I J5285_03295 PF02325 YGGT family J5285_03300 PF02594 Uncharacterised ACR, YggU family COG1872 J5285_03305 PF00719 Inorganic pyrophosphatase J5285_03315 PF03144 Elongation factor Tu domain 2 J5285_03315 PF00009 Elongation factor Tu GTP binding domain J5285_03315 PF00679 Elongation factor G C-terminus J5285_03320 PF01432 Peptidase family M3 J5285_03330 PF07690 Major Facilitator Superfamily J5285_03335 PF00764 Arginosuccinate synthase J5285_03340 PF00106 short chain dehydrogenase J5285_03345 PF01810 LysE type translocator J5285_03350 PF00005 ABC transporter J5285_03355 PF02653 Branched-chain amino acid transport system / permease component J5285_03365 PF04055 Radical SAM superfamily J5285_03380 PF01329 Pterin 4 alpha carbinolamine dehydratase J5285_03385 PF01451 Low molecular weight phosphotyrosine protein phosphatase J5285_03390 PF02834 LigT like Phosphoesterase J5285_03395 PF13472 GDSL-like Lipase/Acylhydrolase family J5285_03400 PF00005 ABC transporter J5285_03410 PF01027 Inhibitor of apoptosis-promoting Bax1 J5285_03425 PF00694 Aconitase C-terminal domain J5285_03425 PF00330 Aconitase family (aconitate hydratase) J5285_03430 PF00005 ABC transporter J5285_03435 PF03379 CcmB protein J5285_03440 PF01578 Cytochrome C assembly protein J5285_03445 PF04995 Heme exporter protein D (CcmD) J5285_03450 PF08534 Redoxin J5285_03455 PF10755 Protein of unknown function (DUF2585) J5285_03460 PF04279 Intracellular septation protein A J5285_03465 PF00448 SRP54-type protein, GTPase domain J5285_03465 PF02881 SRP54-type protein, helical bundle domain J5285_03470 PF00919 Uncharacterized protein family UPF0004 J5285_03470 PF04055 Radical SAM superfamily J5285_03475 PF01678 Diaminopimelate epimerase J5285_03480 PF00330 Aconitase family (aconitate hydratase) J5285_03485 PF07690 Major Facilitator Superfamily J5285_03490 PF00528 Binding-protein-dependent transport system inner membrane component J5285_03500 PF00348 Polyprenyl synthetase J5285_03505 PF00912 Transglycosylase J5285_03510 PF01263 Aldose 1-epimerase J5285_03515 PF04204 Homoserine O-succinyltransferase J5285_03525 PF00005 ABC transporter J5285_03525 PF16326 ABC transporter C-terminal domain J5285_03535 PF01547 Bacterial extracellular solute-binding protein J5285_03540 PF00528 Binding-protein-dependent transport system inner membrane component J5285_03545 PF00005 ABC transporter J5285_03550 PF01435 Peptidase family M48 J5285_03555 PF12706 Beta-lactamase superfamily domain J5285_03560 PF00448 SRP54-type protein, GTPase domain J5285_03560 PF02881 SRP54-type protein, helical bundle domain J5285_03560 PF02978 Signal peptide binding domain J5285_03565 PF02153 Prephenate dehydrogenase J5285_03565 PF01817 Chorismate mutase type II J5285_03570 PF00886 Ribosomal protein S16 J5285_03575 PF05239 PRC-barrel domain J5285_03575 PF01782 RimM N-terminal domain J5285_03580 PF01746 tRNA (Guanine-1)-methyltransferase J5285_03590 PF01245 Ribosomal protein L19 J5285_03595 PF13488 Glycine zipper J5285_03595 PF00691 OmpA family J5285_03600 PF04551 GcpE protein J5285_03605 PF07690 Major Facilitator Superfamily J5285_03610 PF00455 DeoR C terminal sensor domain J5285_03610 PF08220 DeoR-like helix-turn-helix domain J5285_03615 PF02785 Biotin carboxylase C-terminal domain J5285_03615 PF00289 Biotin carboxylase, N-terminal domain J5285_03615 PF00364 Biotin-requiring enzyme J5285_03615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_03615 PF00682 HMGL-like J5285_03615 PF02436 Conserved carboxylase domain J5285_03620 PF00196 Bacterial regulatory proteins, luxR family J5285_03620 PF00072 Response regulator receiver domain J5285_03625 PF00005 ABC transporter J5285_03625 PF00664 ABC transporter transmembrane region J5285_03635 PF00501 AMP-binding enzyme J5285_03635 PF16177 Acetyl-coenzyme A synthetase N-terminus J5285_03635 PF13193 AMP-binding enzyme C-terminal domain J5285_03640 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_03645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5285_03650 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5285_03660 PF07729 FCD domain J5285_03660 PF00392 Bacterial regulatory proteins, gntR family J5285_03665 PF02913 FAD linked oxidases, C-terminal domain J5285_03665 PF01565 FAD binding domain J5285_03670 PF01370 NAD dependent epimerase/dehydratase family J5285_03675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5285_03675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5285_03680 PF00171 Aldehyde dehydrogenase family J5285_03685 PF00291 Pyridoxal-phosphate dependent enzyme J5285_03695 PF01266 FAD dependent oxidoreductase J5285_03705 PF01888 CbiD J5285_03710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_03710 PF07685 CobB/CobQ-like glutamine amidotransferase domain J5285_03715 PF02798 Glutathione S-transferase, N-terminal domain J5285_03725 PF03150 Di-haem cytochrome c peroxidase J5285_03730 PF00180 Isocitrate/isopropylmalate dehydrogenase J5285_03735 PF00694 Aconitase C-terminal domain J5285_03745 PF03328 HpcH/HpaI aldolase/citrate lyase family J5285_03760 PF00829 Ribosomal prokaryotic L21 protein J5285_03765 PF01016 Ribosomal L27 protein J5285_03770 PF13302 Acetyltransferase (GNAT) domain J5285_03780 PF01926 50S ribosome-binding GTPase J5285_03780 PF01018 GTP1/OBG J5285_03785 PF00696 Amino acid kinase family J5285_03785 PF01472 PUA domain J5285_03790 PF00171 Aldehyde dehydrogenase family J5285_03795 PF01467 Cytidylyltransferase-like J5285_03805 PF02590 Predicted SPOUT methyltransferase J5285_03815 PF03572 Peptidase family S41 J5285_03815 PF13180 PDZ domain J5285_03825 PF00293 NUDIX domain J5285_03830 PF00210 Ferritin-like domain J5285_03845 PF02803 Thiolase, C-terminal domain J5285_03845 PF00108 Thiolase, N-terminal domain J5285_03850 PF07879 PHB/PHA accumulation regulator DNA-binding domain J5285_03850 PF05233 PHB accumulation regulatory domain J5285_03855 PF11700 Vacuole effluxer Atg22 like J5285_03860 PF05088 Bacterial NAD-glutamate dehydrogenase J5285_03865 PF02559 CarD-like/TRCF domain J5285_03875 PF00072 Response regulator receiver domain J5285_03875 PF00486 Transcriptional regulatory protein, C terminal J5285_03900 PF03548 Outer membrane lipoprotein carrier protein LolA J5285_03905 PF17854 FtsK alpha domain J5285_03905 PF01580 FtsK/SpoIIIE family J5285_03905 PF09397 Ftsk gamma domain J5285_03905 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J5285_03910 PF00909 Ammonium Transporter Family J5285_03915 PF00543 Nitrogen regulatory protein P-II J5285_03925 PF01494 FAD binding domain J5285_03940 PF11953 Domain of unknown function (DUF3470) J5285_03940 PF00037 4Fe-4S binding domain J5285_03955 PF08264 Anticodon-binding domain of tRNA J5285_03955 PF00133 tRNA synthetases class I (I, L, M and V) J5285_03955 PF13603 Leucyl-tRNA synthetase, Domain 2 J5285_03960 PF01168 Alanine racemase, N-terminal domain J5285_03965 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J5285_03965 PF06165 Glycosyltransferase family 36 J5285_03965 PF10091 Putative glucoamylase J5285_03970 PF07687 Peptidase dimerisation domain J5285_03970 PF01546 Peptidase family M20/M25/M40 J5285_03975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5285_03985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5285_03990 PF02571 Precorrin-6x reductase CbiJ/CobK J5285_03995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5285_04000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5285_04005 PF02570 Precorrin-8X methylmutase J5285_04010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J5285_04015 PF02514 CobN/Magnesium Chelatase J5285_04020 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5285_04020 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5285_04030 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J5285_04030 PF12557 Cob(I)alamin adenosyltransferase N terminal J5285_04035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_04035 PF07685 CobB/CobQ-like glutamine amidotransferase domain J5285_04040 PF03186 CobD/Cbib protein J5285_04045 PF00155 Aminotransferase class I and II J5285_04050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_04050 PF13378 Enolase C-terminal domain-like J5285_04055 PF08240 Alcohol dehydrogenase GroES-like domain J5285_04055 PF00107 Zinc-binding dehydrogenase J5285_04065 PF00248 Aldo/keto reductase family J5285_04075 PF02653 Branched-chain amino acid transport system / permease component J5285_04080 PF00005 ABC transporter J5285_04085 PF00392 Bacterial regulatory proteins, gntR family J5285_04085 PF07729 FCD domain J5285_04090 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J5285_04090 PF08666 SAF domain J5285_04095 PF01808 AICARFT/IMPCHase bienzyme J5285_04095 PF02142 MGS-like domain J5285_04105 PF01189 16S rRNA methyltransferase RsmB/F J5285_04105 PF01029 NusB family J5285_04110 PF01435 Peptidase family M48 J5285_04120 PF02195 ParB-like nuclease domain J5285_04120 PF17762 HTH domain found in ParB protein J5285_04125 PF13614 AAA domain J5285_04130 PF02527 rRNA small subunit methyltransferase G J5285_04135 PF01134 Glucose inhibited division protein A J5285_04135 PF13932 GidA associated domain J5285_04140 PF01926 50S ribosome-binding GTPase J5285_04140 PF12631 MnmE helical domain J5285_04140 PF10396 GTP-binding protein TrmE N-terminus J5285_04145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5285_04145 PF07498 Rho termination factor, N-terminal domain J5285_04145 PF07497 Rho termination factor, RNA-binding domain J5285_04150 PF03653 Uncharacterised protein family (UPF0093) J5285_04155 PF01208 Uroporphyrinogen decarboxylase (URO-D) J5285_04165 PF03618 Kinase/pyrophosphorylase J5285_04170 PF02545 Maf-like protein J5285_04175 PF08501 Shikimate dehydrogenase substrate binding domain J5285_04175 PF01488 Shikimate / quinate 5-dehydrogenase J5285_04175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J5285_04180 PF01121 Dephospho-CoA kinase J5285_04185 PF00929 Exonuclease J5285_04190 PF02556 Preprotein translocase subunit SecB J5285_04195 PF04186 FxsA cytoplasmic membrane protein J5285_04220 PF00986 DNA gyrase B subunit, carboxyl terminus J5285_04220 PF00204 DNA gyrase B J5285_04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04220 PF01751 Toprim domain J5285_04230 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5285_04245 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J5285_04250 PF00291 Pyridoxal-phosphate dependent enzyme J5285_04255 PF00290 Tryptophan synthase alpha chain J5285_04260 PF01039 Carboxyl transferase domain J5285_04265 PF08245 Mur ligase middle domain J5285_04270 PF00085 Thioredoxin J5285_04275 PF12705 PD-(D/E)XK nuclease superfamily J5285_04275 PF13361 UvrD-like helicase C-terminal domain J5285_04275 PF00580 UvrD/REP helicase N-terminal domain J5285_04285 PF12804 MobA-like NTP transferase domain J5285_04290 PF01636 Phosphotransferase enzyme family J5285_04295 PF00512 His Kinase A (phospho-acceptor) domain J5285_04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04300 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J5285_04300 PF05221 S-adenosyl-L-homocysteine hydrolase J5285_04305 PF00381 PTS HPr component phosphorylation site J5285_04310 PF03610 PTS system fructose IIA component J5285_04310 PF03830 PTS system sorbose subfamily IIB component J5285_04315 PF07475 HPr Serine kinase C-terminal domain J5285_04315 PF02603 HPr Serine kinase N terminus J5285_04320 PF13755 Sensor N-terminal transmembrane domain J5285_04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04320 PF00672 HAMP domain J5285_04320 PF00512 His Kinase A (phospho-acceptor) domain J5285_04320 PF13756 Stimulus-sensing domain J5285_04325 PF00072 Response regulator receiver domain J5285_04325 PF00486 Transcriptional regulatory protein, C terminal J5285_04330 PF01293 Phosphoenolpyruvate carboxykinase J5285_04335 PF00472 RF-1 domain J5285_04340 PF00485 Phosphoribulokinase / Uridine kinase family J5285_04345 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J5285_04350 PF00977 Histidine biosynthesis protein J5285_04355 PF00977 Histidine biosynthesis protein J5285_04360 PF00117 Glutamine amidotransferase class-I J5285_04370 PF00475 Imidazoleglycerol-phosphate dehydratase J5285_04375 PF00227 Proteasome subunit J5285_04380 PF00004 ATPase family associated with various cellular activities (AAA) J5285_04380 PF07724 AAA domain (Cdc48 subfamily) J5285_04380 PF10431 C-terminal, D2-small domain, of ClpB protein J5285_04390 PF01274 Malate synthase J5285_04405 PF00072 Response regulator receiver domain J5285_04410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04410 PF00512 His Kinase A (phospho-acceptor) domain J5285_04415 PF00271 Helicase conserved C-terminal domain J5285_04415 PF04408 Helicase associated domain (HA2) J5285_04415 PF00270 DEAD/DEAH box helicase J5285_04415 PF08482 ATP-dependent helicase C-terminal J5285_04420 PF02423 Ornithine cyclodeaminase/mu-crystallin family J5285_04455 PF00625 Guanylate kinase J5285_04460 PF07969 Amidohydrolase family J5285_04465 PF06299 Protein of unknown function (DUF1045) J5285_04470 PF00528 Binding-protein-dependent transport system inner membrane component J5285_04475 PF00528 Binding-protein-dependent transport system inner membrane component J5285_04485 PF00005 ABC transporter J5285_04490 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_04495 PF00005 ABC transporter J5285_04500 PF00005 ABC transporter J5285_04505 PF06007 Phosphonate metabolism protein PhnJ J5285_04510 PF05861 Bacterial phosphonate metabolism protein (PhnI) J5285_04515 PF05845 Bacterial phosphonate metabolism protein (PhnH) J5285_04520 PF06754 Phosphonate metabolism protein PhnG J5285_04525 PF00392 Bacterial regulatory proteins, gntR family J5285_04525 PF07702 UTRA domain J5285_04535 PF02472 Biopolymer transport protein ExbD/TolR J5285_04540 PF01618 MotA/TolQ/ExbB proton channel family J5285_04545 PF00392 Bacterial regulatory proteins, gntR family J5285_04545 PF07702 UTRA domain J5285_04550 PF00528 Binding-protein-dependent transport system inner membrane component J5285_04555 PF00005 ABC transporter J5285_04560 PF00528 Binding-protein-dependent transport system inner membrane component J5285_04565 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J5285_04575 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_04575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5285_04585 PF02082 Transcriptional regulator J5285_04590 PF13416 Bacterial extracellular solute-binding protein J5285_04595 PF00171 Aldehyde dehydrogenase family J5285_04610 PF05962 HutD J5285_04615 PF17391 Urocanase N-terminal domain J5285_04615 PF01175 Urocanase Rossmann-like domain J5285_04615 PF17392 Urocanase C-terminal domain J5285_04625 PF00221 Aromatic amino acid lyase J5285_04630 PF01979 Amidohydrolase family J5285_04635 PF01979 Amidohydrolase family J5285_04640 PF00892 EamA-like transporter family J5285_04655 PF00877 NlpC/P60 family J5285_04665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J5285_04665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J5285_04670 PF02789 Cytosol aminopeptidase family, N-terminal domain J5285_04670 PF00883 Cytosol aminopeptidase family, catalytic domain J5285_04690 PF00437 Type II/IV secretion system protein J5285_04705 PF00263 Bacterial type II and III secretion system protein J5285_04705 PF13629 Pilus formation protein N terminal region J5285_04705 PF04972 BON domain J5285_04745 PF00360 Phytochrome region J5285_04745 PF00512 His Kinase A (phospho-acceptor) domain J5285_04745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04745 PF01590 GAF domain J5285_04745 PF08446 PAS fold J5285_04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04750 PF13426 PAS domain J5285_04750 PF00072 Response regulator receiver domain J5285_04755 PF00072 Response regulator receiver domain J5285_04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04760 PF13426 PAS domain J5285_04760 PF00072 Response regulator receiver domain J5285_04770 PF00005 ABC transporter J5285_04780 PF00245 Alkaline phosphatase J5285_04785 PF00012 Hsp70 protein J5285_04790 PF00684 DnaJ central domain J5285_04790 PF00226 DnaJ domain J5285_04790 PF01556 DnaJ C terminal domain J5285_04800 PF04102 SlyX J5285_04805 PF01970 Tripartite tricarboxylate transporter TctA family J5285_04815 PF03401 Tripartite tricarboxylate transporter family receptor J5285_04820 PF00072 Response regulator receiver domain J5285_04820 PF00158 Sigma-54 interaction domain J5285_04820 PF02954 Bacterial regulatory protein, Fis family J5285_04825 PF00512 His Kinase A (phospho-acceptor) domain J5285_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_04825 PF02743 Cache domain J5285_04830 PF01783 Ribosomal L32p protein family J5285_04835 PF00476 DNA polymerase family A J5285_04835 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J5285_04835 PF01367 5'-3' exonuclease, C-terminal SAM fold J5285_04835 PF01612 3'-5' exonuclease J5285_04850 PF00313 'Cold-shock' DNA-binding domain J5285_04855 PF04073 Aminoacyl-tRNA editing domain J5285_04860 PF00905 Penicillin binding protein transpeptidase domain J5285_04860 PF00912 Transglycosylase J5285_04865 PF01183 Glycosyl hydrolases family 25 J5285_04870 PF00892 EamA-like transporter family J5285_04875 PF00155 Aminotransferase class I and II J5285_04875 PF00392 Bacterial regulatory proteins, gntR family J5285_04895 PF00679 Elongation factor G C-terminus J5285_04895 PF00009 Elongation factor Tu GTP binding domain J5285_04895 PF03144 Elongation factor Tu domain 2 J5285_04895 PF06421 GTP-binding protein LepA C-terminus J5285_04900 PF01817 Chorismate mutase type II J5285_04900 PF00800 Prephenate dehydratase J5285_04905 PF02348 Cytidylyltransferase J5285_04910 PF00034 Cytochrome c J5285_04915 PF00873 AcrB/AcrD/AcrF family J5285_04920 PF13533 Biotin-lipoyl like J5285_04930 PF06114 IrrE N-terminal-like domain J5285_04945 PF01625 Peptide methionine sulfoxide reductase J5285_04950 PF02608 ABC transporter substrate-binding protein PnrA-like J5285_04955 PF00005 ABC transporter J5285_04960 PF02653 Branched-chain amino acid transport system / permease component J5285_04965 PF02653 Branched-chain amino acid transport system / permease component J5285_04970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5285_04975 PF01048 Phosphorylase superfamily J5285_04980 PF01791 DeoC/LacD family aldolase J5285_04985 PF02885 Glycosyl transferase family, helical bundle domain J5285_04985 PF00591 Glycosyl transferase family, a/b domain J5285_04985 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J5285_04990 PF00291 Pyridoxal-phosphate dependent enzyme J5285_04995 PF01810 LysE type translocator J5285_05000 PF00692 dUTPase J5285_05005 PF00009 Elongation factor Tu GTP binding domain J5285_05005 PF03144 Elongation factor Tu domain 2 J5285_05005 PF16658 Class II release factor RF3, C-terminal domain J5285_05010 PF04127 DNA / pantothenate metabolism flavoprotein J5285_05010 PF02441 Flavoprotein J5285_05020 PF00293 NUDIX domain J5285_05020 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J5285_05020 PF09297 NADH pyrophosphatase zinc ribbon domain J5285_05035 PF12169 DNA polymerase III subunits gamma and tau domain III J5285_05035 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J5285_05035 PF12170 DNA polymerase III tau subunit V interacting with alpha J5285_05040 PF02575 YbaB/EbfC DNA-binding family J5285_05050 PF13662 Toprim domain J5285_05050 PF02132 RecR protein J5285_05055 PF13406 Transglycosylase SLT domain J5285_05060 PF05977 Transmembrane secretion effector J5285_05065 PF17384 RimP C-terminal SH3 domain J5285_05065 PF02576 RimP N-terminal domain J5285_05070 PF13184 NusA-like KH domain J5285_05070 PF08529 NusA N-terminal domain J5285_05070 PF00575 S1 RNA binding domain J5285_05080 PF00009 Elongation factor Tu GTP binding domain J5285_05080 PF03144 Elongation factor Tu domain 2 J5285_05080 PF11987 Translation-initiation factor 2 J5285_05080 PF08364 Bacterial translation initiation factor IF-2 associated region J5285_05080 PF04760 Translation initiation factor IF-2, N-terminal region J5285_05085 PF02033 Ribosome-binding factor A J5285_05090 PF01509 TruB family pseudouridylate synthase (N terminal domain) J5285_05090 PF09157 Pseudouridine synthase II TruB, C-terminal J5285_05090 PF16198 tRNA pseudouridylate synthase B C-terminal domain J5285_05095 PF00312 Ribosomal protein S15 J5285_05105 PF00013 KH domain J5285_05105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J5285_05105 PF01138 3' exoribonuclease family, domain 1 J5285_05105 PF03725 3' exoribonuclease family, domain 2 J5285_05105 PF00575 S1 RNA binding domain J5285_05110 PF05175 Methyltransferase small domain J5285_05110 PF08468 Methyltransferase small domain N-terminal J5285_05120 PF00294 pfkB family carbohydrate kinase J5285_05130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5285_05130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_05135 PF00583 Acetyltransferase (GNAT) family J5285_05140 PF00899 ThiF family J5285_05140 PF00581 Rhodanese-like domain J5285_05145 PF02463 RecF/RecN/SMC N terminal domain J5285_05155 PF00485 Phosphoribulokinase / Uridine kinase family J5285_05160 PF00005 ABC transporter J5285_05165 PF02653 Branched-chain amino acid transport system / permease component J5285_05170 PF13407 Periplasmic binding protein domain J5285_05175 PF00480 ROK family J5285_05180 PF02615 Malate/L-lactate dehydrogenase J5285_05185 PF00300 Histidine phosphatase superfamily (branch 1) J5285_05190 PF05173 Dihydrodipicolinate reductase, C-terminus J5285_05190 PF01113 Dihydrodipicolinate reductase, N-terminus J5285_05195 PF00664 ABC transporter transmembrane region J5285_05195 PF00005 ABC transporter J5285_05200 PF02685 Glucokinase J5285_05205 PF02142 MGS-like domain J5285_05210 PF03411 Penicillin-insensitive murein endopeptidase J5285_05215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_05220 PF00528 Binding-protein-dependent transport system inner membrane component J5285_05225 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_05225 PF00528 Binding-protein-dependent transport system inner membrane component J5285_05240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_05240 PF00005 ABC transporter J5285_05245 PF01266 FAD dependent oxidoreductase J5285_05250 PF00120 Glutamine synthetase, catalytic domain J5285_05255 PF01266 FAD dependent oxidoreductase J5285_05265 PF06912 Protein of unknown function (DUF1275) J5285_05275 PF03458 UPF0126 domain J5285_05285 PF07977 FabA-like domain J5285_05290 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_05290 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_05300 PF04909 Amidohydrolase J5285_05320 PF07690 Major Facilitator Superfamily J5285_05320 PF00083 Sugar (and other) transporter J5285_05325 PF06481 COX Aromatic Rich Motif J5285_05325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J5285_05330 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5285_05335 PF00510 Cytochrome c oxidase subunit III J5285_05340 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J5285_05350 PF01676 Metalloenzyme superfamily J5285_05355 PF00962 Adenosine/AMP deaminase J5285_05375 PF01022 Bacterial regulatory protein, arsR family J5285_05380 PF00308 Bacterial dnaA protein J5285_05380 PF08299 Bacterial dnaA protein helix-turn-helix J5285_05380 PF11638 DnaA N-terminal domain J5285_05385 PF01649 Ribosomal protein S20 J5285_05390 PF00378 Enoyl-CoA hydratase/isomerase J5285_05395 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J5285_05395 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J5285_05395 PF06827 Zinc finger found in FPG and IleRS J5285_05400 PF01209 ubiE/COQ5 methyltransferase family J5285_05405 PF03109 ABC1 family J5285_05415 PF06969 HemN C-terminal domain J5285_05415 PF04055 Radical SAM superfamily J5285_05420 PF01725 Ham1 family J5285_05425 PF03725 3' exoribonuclease family, domain 2 J5285_05425 PF01138 3' exoribonuclease family, domain 1 J5285_05430 PF01628 HrcA protein C terminal domain J5285_05435 PF01025 GrpE J5285_05440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J5285_05445 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus J5285_05445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J5285_05450 PF00309 Sigma-54 factor, Activator interacting domain (AID) J5285_05450 PF04963 Sigma-54 factor, core binding domain J5285_05450 PF04552 Sigma-54, DNA binding domain J5285_05455 PF00005 ABC transporter J5285_05460 PF03968 OstA-like protein J5285_05470 PF01343 Peptidase family S49 J5285_05475 PF00216 Bacterial DNA-binding protein J5285_05485 PF10672 S-adenosylmethionine-dependent methyltransferase J5285_05485 PF17785 PUA-like domain J5285_05490 PF00588 SpoU rRNA Methylase family J5285_05490 PF08032 RNA 2'-O ribose methyltransferase substrate binding J5285_05495 PF01252 Signal peptidase (SPase) II J5285_05500 PF00672 HAMP domain J5285_05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_05500 PF00512 His Kinase A (phospho-acceptor) domain J5285_05500 PF01627 Hpt domain J5285_05500 PF00072 Response regulator receiver domain J5285_05500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J5285_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_05515 PF03466 LysR substrate binding domain J5285_05520 PF05192 MutS domain III J5285_05520 PF05188 MutS domain II J5285_05520 PF01624 MutS domain I J5285_05520 PF00488 MutS domain V J5285_05520 PF05190 MutS family domain IV J5285_05525 PF08335 GlnD PII-uridylyltransferase J5285_05525 PF01966 HD domain J5285_05525 PF01909 Nucleotidyltransferase domain J5285_05525 PF01842 ACT domain J5285_05530 PF03023 Lipid II flippase MurJ J5285_05535 PF00579 tRNA synthetases class I (W and Y) J5285_05545 PF01106 NifU-like domain J5285_05550 PF00814 Glycoprotease family J5285_05555 PF00583 Acetyltransferase (GNAT) family J5285_05560 PF01475 Ferric uptake regulator family J5285_05565 PF01553 Acyltransferase J5285_05570 PF00919 Uncharacterized protein family UPF0004 J5285_05570 PF04055 Radical SAM superfamily J5285_05570 PF01938 TRAM domain J5285_05575 PF02562 PhoH-like protein J5285_05580 PF02130 Uncharacterized protein family UPF0054 J5285_05585 PF00571 CBS domain J5285_05585 PF03471 Transporter associated domain J5285_05590 PF00795 Carbon-nitrogen hydrolase J5285_05595 PF01381 Helix-turn-helix J5285_05600 PF02773 S-adenosylmethionine synthetase, C-terminal domain J5285_05600 PF02772 S-adenosylmethionine synthetase, central domain J5285_05600 PF00438 S-adenosylmethionine synthetase, N-terminal domain J5285_05605 PF02390 Putative methyltransferase J5285_05610 PF08220 DeoR-like helix-turn-helix domain J5285_05610 PF00455 DeoR C terminal sensor domain J5285_05615 PF00293 NUDIX domain J5285_05620 PF00294 pfkB family carbohydrate kinase J5285_05625 PF02646 RmuC family J5285_05630 PF01327 Polypeptide deformylase J5285_05635 PF02911 Formyl transferase, C-terminal domain J5285_05635 PF00551 Formyl transferase J5285_05640 PF01416 tRNA pseudouridine synthase J5285_05645 PF03960 ArsC family J5285_05660 PF01546 Peptidase family M20/M25/M40 J5285_05660 PF07687 Peptidase dimerisation domain J5285_05665 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_05665 PF14602 Hexapeptide repeat of succinyl-transferase J5285_05665 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J5285_05675 PF00665 Integrase core domain J5285_05680 PF01156 Inosine-uridine preferring nucleoside hydrolase J5285_05685 PF00011 Hsp20/alpha crystallin family J5285_05710 PF00696 Amino acid kinase family J5285_05720 PF01926 50S ribosome-binding GTPase J5285_05725 PF02096 60Kd inner membrane protein J5285_05725 PF14849 YidC periplasmic domain J5285_05730 PF00825 Ribonuclease P J5285_05735 PF00468 Ribosomal protein L34 J5285_05740 PF00672 HAMP domain J5285_05740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_05740 PF02203 Tar ligand binding domain homologue J5285_05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_05745 PF00512 His Kinase A (phospho-acceptor) domain J5285_05765 PF13419 Haloacid dehalogenase-like hydrolase J5285_05790 PF05544 Proline racemase J5285_05795 PF01979 Amidohydrolase family J5285_05800 PF00156 Phosphoribosyl transferase domain J5285_05805 PF00294 pfkB family carbohydrate kinase J5285_05820 PF00375 Sodium:dicarboxylate symporter family J5285_05825 PF12852 Cupin J5285_05825 PF12833 Helix-turn-helix domain J5285_05830 PF07690 Major Facilitator Superfamily J5285_05835 PF00342 Phosphoglucose isomerase J5285_05840 PF00501 AMP-binding enzyme J5285_05840 PF13193 AMP-binding enzyme C-terminal domain J5285_05845 PF00005 ABC transporter J5285_05845 PF08402 TOBE domain J5285_05860 PF07715 TonB-dependent Receptor Plug Domain J5285_05860 PF00593 TonB dependent receptor J5285_05870 PF02311 AraC-like ligand binding domain J5285_05870 PF12833 Helix-turn-helix domain J5285_05895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5285_05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_05900 PF04542 Sigma-70 region 2 J5285_05900 PF04545 Sigma-70, region 4 J5285_05905 PF12973 ChrR Cupin-like domain J5285_05920 PF05336 L-rhamnose mutarotase J5285_05925 PF02653 Branched-chain amino acid transport system / permease component J5285_05930 PF02653 Branched-chain amino acid transport system / permease component J5285_05935 PF00005 ABC transporter J5285_05940 PF13407 Periplasmic binding protein domain J5285_05945 PF00455 DeoR C terminal sensor domain J5285_05945 PF08220 DeoR-like helix-turn-helix domain J5285_05950 PF00596 Class II Aldolase and Adducin N-terminal domain J5285_05955 PF01679 Proteolipid membrane potential modulator J5285_05960 PF01261 Xylose isomerase-like TIM barrel J5285_05970 PF02661 Fic/DOC family J5285_05970 PF12728 Helix-turn-helix domain J5285_05990 PF03976 Polyphosphate kinase 2 (PPK2) J5285_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_05995 PF00512 His Kinase A (phospho-acceptor) domain J5285_05995 PF00989 PAS fold J5285_05995 PF16736 Single Cache-like J5285_06000 PF12849 PBP superfamily domain J5285_06005 PF00528 Binding-protein-dependent transport system inner membrane component J5285_06010 PF00528 Binding-protein-dependent transport system inner membrane component J5285_06015 PF00005 ABC transporter J5285_06020 PF01895 PhoU domain J5285_06025 PF00072 Response regulator receiver domain J5285_06025 PF00486 Transcriptional regulatory protein, C terminal J5285_06035 PF00202 Aminotransferase class-III J5285_06040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J5285_06040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J5285_06045 PF01430 Hsp33 protein J5285_06050 PF07519 Tannase and feruloyl esterase J5285_06055 PF04379 ApaG domain J5285_06060 PF01053 Cys/Met metabolism PLP-dependent enzyme J5285_06065 PF00692 dUTPase J5285_06075 PF13356 Arm DNA-binding domain J5285_06075 PF00589 Phage integrase family J5285_06085 PF03852 DNA mismatch endonuclease Vsr J5285_06090 PF00145 C-5 cytosine-specific DNA methylase J5285_06105 PF02796 Helix-turn-helix domain of resolvase J5285_06105 PF00239 Resolvase, N terminal domain J5285_06185 PF00005 ABC transporter J5285_06185 PF00664 ABC transporter transmembrane region J5285_06200 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_06210 PF00196 Bacterial regulatory proteins, luxR family J5285_06210 PF00072 Response regulator receiver domain J5285_06220 PF01180 Dihydroorotate dehydrogenase J5285_06230 PF00270 DEAD/DEAH box helicase J5285_06230 PF08494 DEAD/H associated J5285_06230 PF00271 Helicase conserved C-terminal domain J5285_06240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) J5285_06240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 J5285_06265 PF01925 Sulfite exporter TauE/SafE J5285_06275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_06275 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5285_06275 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_06275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_06280 PF00108 Thiolase, N-terminal domain J5285_06280 PF02803 Thiolase, C-terminal domain J5285_06285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5285_06285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5285_06285 PF00378 Enoyl-CoA hydratase/isomerase J5285_06335 PF18073 Rubredoxin metal binding domain J5285_06355 PF03050 Transposase IS66 family J5285_06355 PF13817 IS66 C-terminal element J5285_06355 PF13007 Transposase C of IS166 homeodomain J5285_06355 PF13005 zinc-finger binding domain of transposase IS66 J5285_06360 PF05717 IS66 Orf2 like protein J5285_06365 PF01527 Transposase J5285_06380 PF00589 Phage integrase family J5285_06380 PF13356 Arm DNA-binding domain J5285_06400 PF05717 IS66 Orf2 like protein J5285_06405 PF13005 zinc-finger binding domain of transposase IS66 J5285_06405 PF13817 IS66 C-terminal element J5285_06405 PF03050 Transposase IS66 family J5285_06405 PF13007 Transposase C of IS166 homeodomain J5285_06410 PF07929 Plasmid pRiA4b ORF-3-like protein J5285_06415 PF05523 WxcM-like, C-terminal J5285_06420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J5285_06425 PF00535 Glycosyl transferase family 2 J5285_06445 PF00072 Response regulator receiver domain J5285_06445 PF00486 Transcriptional regulatory protein, C terminal J5285_06450 PF13492 GAF domain J5285_06450 PF02702 Osmosensitive K+ channel His kinase sensor domain J5285_06450 PF00512 His Kinase A (phospho-acceptor) domain J5285_06450 PF13493 Domain of unknown function (DUF4118) J5285_06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_06455 PF02669 K+-transporting ATPase, c chain J5285_06465 PF03814 Potassium-transporting ATPase A subunit J5285_06475 PF03334 Na+/H+ antiporter subunit J5285_06480 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J5285_06485 PF01899 Na+/H+ ion antiporter subunit J5285_06490 PF00361 Proton-conducting membrane transporter J5285_06495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5285_06500 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J5285_06500 PF13244 Domain of unknown function (DUF4040) J5285_06500 PF00361 Proton-conducting membrane transporter J5285_06500 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5285_06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_06520 PF00072 Response regulator receiver domain J5285_06525 PF01627 Hpt domain J5285_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_06525 PF02895 Signal transducing histidine kinase, homodimeric domain J5285_06525 PF01584 CheW-like domain J5285_06530 PF03705 CheR methyltransferase, all-alpha domain J5285_06530 PF01739 CheR methyltransferase, SAM binding domain J5285_06535 PF00072 Response regulator receiver domain J5285_06535 PF01339 CheB methylesterase J5285_06540 PF00072 Response regulator receiver domain J5285_06545 PF03975 CheD chemotactic sensory transduction J5285_06560 PF03275 UDP-galactopyranose mutase J5285_06570 PF01514 Secretory protein of YscJ/FliF family J5285_06570 PF08345 Flagellar M-ring protein C-terminal J5285_06575 PF00196 Bacterial regulatory proteins, luxR family J5285_06575 PF03472 Autoinducer binding domain J5285_06585 PF00672 HAMP domain J5285_06585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_06590 PF01627 Hpt domain J5285_06590 PF00672 HAMP domain J5285_06590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_06590 PF00512 His Kinase A (phospho-acceptor) domain J5285_06590 PF00072 Response regulator receiver domain J5285_06595 PF01741 Large-conductance mechanosensitive channel, MscL J5285_06600 PF00155 Aminotransferase class I and II J5285_06610 PF01312 FlhB HrpN YscU SpaS Family J5285_06615 PF01706 FliG C-terminal domain J5285_06615 PF14841 FliG middle domain J5285_06615 PF14842 FliG N-terminal domain J5285_06620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J5285_06625 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J5285_06630 PF01618 MotA/TolQ/ExbB proton channel family J5285_06635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5285_06635 PF00460 Flagella basal body rod protein J5285_06640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J5285_06640 PF18269 T3SS EscN ATPase C-terminal domain J5285_06655 PF00669 Bacterial flagellin N-terminal helical region J5285_06655 PF00700 Bacterial flagellin C-terminal helical region J5285_06660 PF00669 Bacterial flagellin N-terminal helical region J5285_06660 PF00700 Bacterial flagellin C-terminal helical region J5285_06665 PF00669 Bacterial flagellin N-terminal helical region J5285_06665 PF00700 Bacterial flagellin C-terminal helical region J5285_06670 PF00669 Bacterial flagellin N-terminal helical region J5285_06670 PF00700 Bacterial flagellin C-terminal helical region J5285_06680 PF00691 OmpA family J5285_06680 PF13677 Membrane MotB of proton-channel complex MotA/MotB J5285_06690 PF02120 Flagellar hook-length control protein FliK J5285_06700 PF00486 Transcriptional regulatory protein, C terminal J5285_06705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5285_06705 PF00460 Flagella basal body rod protein J5285_06705 PF07559 Flagellar basal body protein FlaE J5285_06710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5285_06710 PF00460 Flagella basal body rod protein J5285_06720 PF07309 Flagellar protein FlaF J5285_06725 PF07378 Flagellar protein FlbT J5285_06735 PF01313 Bacterial export proteins, family 3 J5285_06845 PF17862 AAA+ lid domain J5285_06845 PF01434 Peptidase family M41 J5285_06845 PF00004 ATPase family associated with various cellular activities (AAA) J5285_06900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5285_06910 PF00815 Histidinol dehydrogenase J5285_06915 PF06793 Uncharacterised protein family (UPF0262) J5285_06925 PF01176 Translation initiation factor 1A / IF-1 J5285_06930 PF02545 Maf-like protein J5285_06935 PF03884 DNA gyrase inhibitor YacG J5285_06945 PF00771 FHIPEP family J5285_06950 PF01311 Bacterial export proteins, family 1 J5285_06975 PF00813 FliP family J5285_06985 PF02107 Flagellar L-ring protein J5285_06995 PF02119 Flagellar P-ring protein J5285_07000 PF13144 Chaperone for flagella basal body P-ring formation J5285_07005 PF00460 Flagella basal body rod protein J5285_07005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5285_07010 PF02049 Flagellar hook-basal body complex protein FliE J5285_07015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J5285_07020 PF00460 Flagella basal body rod protein J5285_07030 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J5285_07030 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J5285_07035 PF00356 Bacterial regulatory proteins, lacI family J5285_07040 PF01547 Bacterial extracellular solute-binding protein J5285_07045 PF00528 Binding-protein-dependent transport system inner membrane component J5285_07050 PF00528 Binding-protein-dependent transport system inner membrane component J5285_07055 PF00128 Alpha amylase, catalytic domain J5285_07060 PF00005 ABC transporter J5285_07060 PF03459 TOBE domain J5285_07060 PF17912 MalK OB fold domain J5285_07070 PF00920 Dehydratase family J5285_07075 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J5285_07080 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J5285_07080 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J5285_07085 PF01266 FAD dependent oxidoreductase J5285_07090 PF00120 Glutamine synthetase, catalytic domain J5285_07115 PF09856 Predicted transcriptional regulator (DUF2083) J5285_07115 PF06114 IrrE N-terminal-like domain J5285_07115 PF01381 Helix-turn-helix J5285_07120 PF13416 Bacterial extracellular solute-binding protein J5285_07125 PF00005 ABC transporter J5285_07125 PF08402 TOBE domain J5285_07130 PF00528 Binding-protein-dependent transport system inner membrane component J5285_07135 PF00528 Binding-protein-dependent transport system inner membrane component J5285_07140 PF00501 AMP-binding enzyme J5285_07140 PF13193 AMP-binding enzyme C-terminal domain J5285_07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_07150 PF00512 His Kinase A (phospho-acceptor) domain J5285_07150 PF00989 PAS fold J5285_07150 PF13188 PAS domain J5285_07150 PF13426 PAS domain J5285_07160 PF02541 Ppx/GppA phosphatase family J5285_07165 PF01728 FtsJ-like methyltransferase J5285_07170 PF07690 Major Facilitator Superfamily J5285_07175 PF00753 Metallo-beta-lactamase superfamily J5285_07180 PF00571 CBS domain J5285_07180 PF00478 IMP dehydrogenase / GMP reductase domain J5285_07190 PF01738 Dienelactone hydrolase family J5285_07195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_07195 PF03466 LysR substrate binding domain J5285_07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_07205 PF03466 LysR substrate binding domain J5285_07215 PF04107 Glutamate-cysteine ligase family 2(GCS2) J5285_07220 PF04452 RNA methyltransferase J5285_07225 PF01384 Phosphate transporter family J5285_07235 PF05116 Sucrose-6F-phosphate phosphohydrolase J5285_07240 PF00534 Glycosyl transferases group 1 J5285_07240 PF13439 Glycosyltransferase Family 4 J5285_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_07245 PF03466 LysR substrate binding domain J5285_07250 PF01565 FAD binding domain J5285_07250 PF02913 FAD linked oxidases, C-terminal domain J5285_07255 PF01565 FAD binding domain J5285_07260 PF02754 Cysteine-rich domain J5285_07260 PF13183 4Fe-4S dicluster domain J5285_07265 PF03734 L,D-transpeptidase catalytic domain J5285_07265 PF17969 L,D-transpeptidase C-terminal domain J5285_07270 PF03352 Methyladenine glycosylase J5285_07280 PF03601 Conserved hypothetical protein 698 J5285_07285 PF03466 LysR substrate binding domain J5285_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_07315 PF03129 Anticodon binding domain J5285_07315 PF13393 Histidyl-tRNA synthetase J5285_07320 PF13393 Histidyl-tRNA synthetase J5285_07325 PF01634 ATP phosphoribosyltransferase J5285_07335 PF07681 DoxX J5285_07345 PF00118 TCP-1/cpn60 chaperonin family J5285_07350 PF00166 Chaperonin 10 Kd subunit J5285_07365 PF06574 FAD synthetase J5285_07365 PF01687 Riboflavin kinase J5285_07370 PF08264 Anticodon-binding domain of tRNA J5285_07370 PF00133 tRNA synthetases class I (I, L, M and V) J5285_07380 PF14437 MafB19-like deaminase J5285_07385 PF00849 RNA pseudouridylate synthase J5285_07385 PF01479 S4 domain J5285_07395 PF01734 Patatin-like phospholipase J5285_07400 PF01523 Putative modulator of DNA gyrase J5285_07405 PF00459 Inositol monophosphatase family J5285_07415 PF00534 Glycosyl transferases group 1 J5285_07415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J5285_07425 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J5285_07435 PF05974 Domain of unknown function (DUF892) J5285_07445 PF08676 MutL C terminal dimerisation domain J5285_07445 PF01119 DNA mismatch repair protein, C-terminal domain J5285_07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_07450 PF00512 His Kinase A (phospho-acceptor) domain J5285_07450 PF18415 Histidine kinase receptor ArcB trans-membrane domain J5285_07450 PF01627 Hpt domain J5285_07450 PF00989 PAS fold J5285_07450 PF00072 Response regulator receiver domain J5285_07455 PF00563 EAL domain J5285_07455 PF03707 Bacterial signalling protein N terminal repeat J5285_07455 PF00990 Diguanylate cyclase, GGDEF domain J5285_07455 PF13188 PAS domain J5285_07460 PF08450 SMP-30/Gluconolactonase/LRE-like region J5285_07465 PF01081 KDPG and KHG aldolase J5285_07470 PF05035 2-keto-3-deoxy-galactonokinase J5285_07480 PF09339 IclR helix-turn-helix domain J5285_07480 PF01614 Bacterial transcriptional regulator J5285_07485 PF03472 Autoinducer binding domain J5285_07485 PF00196 Bacterial regulatory proteins, luxR family J5285_07495 PF10609 NUBPL iron-transfer P-loop NTPase J5285_07500 PF01544 CorA-like Mg2+ transporter protein J5285_07505 PF02705 K+ potassium transporter J5285_07515 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter J5285_07520 PF00119 ATP synthase A chain J5285_07525 PF00137 ATP synthase subunit C J5285_07530 PF00430 ATP synthase B/B' CF(0) J5285_07535 PF00430 ATP synthase B/B' CF(0) J5285_07540 PF00672 HAMP domain J5285_07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_07545 PF01351 Ribonuclease HII J5285_07560 PF00994 Probable molybdopterin binding domain J5285_07565 PF00288 GHMP kinases N terminal domain J5285_07565 PF08544 GHMP kinases C terminal J5285_07575 PF00348 Polyprenyl synthetase J5285_07590 PF01541 GIY-YIG catalytic domain J5285_07595 PF06965 Na+/H+ antiporter 1 J5285_07595 PF01343 Peptidase family S49 J5285_07610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J5285_07615 PF04011 LemA family J5285_07620 PF02091 Glycyl-tRNA synthetase alpha subunit J5285_07625 PF05746 DALR anticodon binding domain J5285_07625 PF02092 Glycyl-tRNA synthetase beta subunit J5285_07640 PF04463 Protein of unknown function (DUF523) J5285_07645 PF00672 HAMP domain J5285_07645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_07645 PF17200 Single Cache domain 2 J5285_07655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J5285_07655 PF02844 Phosphoribosylglycinamide synthetase, N domain J5285_07655 PF02843 Phosphoribosylglycinamide synthetase, C domain J5285_07660 PF09371 Tex-like protein N-terminal domain J5285_07660 PF00575 S1 RNA binding domain J5285_07660 PF17674 HHH domain J5285_07660 PF16921 Tex protein YqgF-like domain J5285_07670 PF01040 UbiA prenyltransferase family J5285_07680 PF01565 FAD binding domain J5285_07680 PF02913 FAD linked oxidases, C-terminal domain J5285_07685 PF01300 Telomere recombination J5285_07685 PF03481 Putative GTP-binding controlling metal-binding J5285_07695 PF00355 Rieske [2Fe-2S] domain J5285_07695 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J5285_07700 PF00970 Oxidoreductase FAD-binding domain J5285_07700 PF00111 2Fe-2S iron-sulfur cluster binding domain J5285_07700 PF00175 Oxidoreductase NAD-binding domain J5285_07705 PF07886 BA14K-like protein J5285_07710 PF07886 BA14K-like protein J5285_07720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_07720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_07720 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_07720 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5285_07735 PF05958 tRNA (Uracil-5-)-methyltransferase J5285_07740 PF01479 S4 domain J5285_07740 PF01728 FtsJ-like methyltransferase J5285_07745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_07745 PF00672 HAMP domain J5285_07760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5285_07760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5285_07770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J5285_07770 PF02779 Transketolase, pyrimidine binding domain J5285_07770 PF02780 Transketolase, C-terminal domain J5285_07775 PF05726 Pirin C-terminal cupin domain J5285_07775 PF02678 Pirin J5285_07785 PF02609 Exonuclease VII small subunit J5285_07790 PF00850 Histone deacetylase domain J5285_07795 PF02632 BioY family J5285_07800 PF02361 Cobalt transport protein J5285_07805 PF00005 ABC transporter J5285_07810 PF06224 Winged helix DNA-binding domain J5285_07815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J5285_07815 PF00925 GTP cyclohydrolase II J5285_07820 PF01264 Chorismate synthase J5285_07825 PF08448 PAS fold J5285_07825 PF00563 EAL domain J5285_07825 PF00990 Diguanylate cyclase, GGDEF domain J5285_07825 PF08447 PAS fold J5285_07835 PF00300 Histidine phosphatase superfamily (branch 1) J5285_07845 PF01556 DnaJ C terminal domain J5285_07845 PF00226 DnaJ domain J5285_07845 PF00684 DnaJ central domain J5285_07855 PF01243 Pyridoxamine 5'-phosphate oxidase J5285_07855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J5285_07865 PF13419 Haloacid dehalogenase-like hydrolase J5285_07885 PF01523 Putative modulator of DNA gyrase J5285_07895 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J5285_07895 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J5285_07900 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5285_07905 PF01040 UbiA prenyltransferase family J5285_07910 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J5285_07915 PF00510 Cytochrome c oxidase subunit III J5285_07925 PF02104 SURF1 family J5285_07930 PF02401 LytB protein J5285_07935 PF01636 Phosphotransferase enzyme family J5285_07940 PF00075 RNase H J5285_07950 PF01609 Transposase DDE domain J5285_07955 PF01297 Zinc-uptake complex component A periplasmic J5285_07960 PF00950 ABC 3 transport family J5285_07965 PF00005 ABC transporter J5285_07970 PF08534 Redoxin J5285_07970 PF00462 Glutaredoxin J5285_07980 PF02622 Uncharacterized ACR, COG1678 J5285_07990 PF15887 Putative zinc-binding metallo-peptidase J5285_07990 PF10005 zinc-ribbon domain J5285_08000 PF13302 Acetyltransferase (GNAT) domain J5285_08005 PF05193 Peptidase M16 inactive domain J5285_08005 PF00675 Insulinase (Peptidase family M16) J5285_08010 PF14821 Threonine synthase N terminus J5285_08010 PF00291 Pyridoxal-phosphate dependent enzyme J5285_08025 PF13419 Haloacid dehalogenase-like hydrolase J5285_08035 PF02632 BioY family J5285_08050 PF01555 DNA methylase J5285_08050 PF18755 Restriction Enzyme Adenine Methylase Associated J5285_08065 PF00633 Helix-hairpin-helix motif J5285_08065 PF00730 HhH-GPD superfamily base excision DNA repair protein J5285_08065 PF14815 NUDIX domain J5285_08075 PF13462 Thioredoxin J5285_08080 PF02463 RecF/RecN/SMC N terminal domain J5285_08085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_08085 PF00672 HAMP domain J5285_08105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_08110 PF00391 PEP-utilising enzyme, mobile domain J5285_08110 PF02896 PEP-utilising enzyme, TIM barrel domain J5285_08110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J5285_08130 PF01850 PIN domain J5285_08150 PF06039 Malate:quinone oxidoreductase (Mqo) J5285_08175 PF12804 MobA-like NTP transferase domain J5285_08175 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_08190 PF00009 Elongation factor Tu GTP binding domain J5285_08195 PF01507 Phosphoadenosine phosphosulfate reductase family J5285_08200 PF01507 Phosphoadenosine phosphosulfate reductase family J5285_08210 PF00528 Binding-protein-dependent transport system inner membrane component J5285_08215 PF00528 Binding-protein-dependent transport system inner membrane component J5285_08220 PF00005 ABC transporter J5285_08220 PF12857 TOBE-like domain J5285_08235 PF16197 Ketoacyl-synthetase C-terminal extension J5285_08235 PF08659 KR domain J5285_08235 PF00550 Phosphopantetheine attachment site J5285_08235 PF14765 Polyketide synthase dehydratase J5285_08235 PF08240 Alcohol dehydrogenase GroES-like domain J5285_08235 PF00698 Acyl transferase domain J5285_08235 PF00107 Zinc-binding dehydrogenase J5285_08235 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_08235 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_08240 PF00563 EAL domain J5285_08240 PF00989 PAS fold J5285_08240 PF01590 GAF domain J5285_08240 PF00990 Diguanylate cyclase, GGDEF domain J5285_08250 PF00440 Bacterial regulatory proteins, tetR family J5285_08250 PF13977 BetI-type transcriptional repressor, C-terminal J5285_08255 PF00171 Aldehyde dehydrogenase family J5285_08260 PF05199 GMC oxidoreductase J5285_08260 PF00732 GMC oxidoreductase J5285_08275 PF00654 Voltage gated chloride channel J5285_08295 PF00990 Diguanylate cyclase, GGDEF domain J5285_08295 PF00563 EAL domain J5285_08295 PF13188 PAS domain J5285_08295 PF03707 Bacterial signalling protein N terminal repeat J5285_08310 PF07690 Major Facilitator Superfamily J5285_08320 PF04679 ATP dependent DNA ligase C terminal region J5285_08320 PF01068 ATP dependent DNA ligase domain J5285_08320 PF04675 DNA ligase N terminus J5285_08330 PF17969 L,D-transpeptidase C-terminal domain J5285_08330 PF03734 L,D-transpeptidase catalytic domain J5285_08335 PF17969 L,D-transpeptidase C-terminal domain J5285_08335 PF03734 L,D-transpeptidase catalytic domain J5285_08350 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J5285_08355 PF01047 MarR family J5285_08360 PF02566 OsmC-like protein J5285_08400 PF00248 Aldo/keto reductase family J5285_08410 PF08279 HTH domain J5285_08410 PF13280 WYL domain J5285_08425 PF01063 Amino-transferase class IV J5285_08440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_08440 PF03466 LysR substrate binding domain J5285_08445 PF01810 LysE type translocator J5285_08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_08450 PF03466 LysR substrate binding domain J5285_08470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J5285_08470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J5285_08475 PF00106 short chain dehydrogenase J5285_08480 PF01638 HxlR-like helix-turn-helix J5285_08490 PF05872 Bacterial protein of unknown function (DUF853) J5285_08500 PF01810 LysE type translocator J5285_08505 PF01322 Cytochrome C' J5285_08510 PF00034 Cytochrome c J5285_08515 PF00672 HAMP domain J5285_08515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_08540 PF00583 Acetyltransferase (GNAT) family J5285_08555 PF09278 MerR, DNA binding J5285_08555 PF00376 MerR family regulatory protein J5285_08565 PF02583 Metal-sensitive transcriptional repressor J5285_08585 PF00528 Binding-protein-dependent transport system inner membrane component J5285_08595 PF01609 Transposase DDE domain J5285_08600 PF00326 Prolyl oligopeptidase family J5285_08600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J5285_08615 PF00701 Dihydrodipicolinate synthetase family J5285_08640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_08650 PF03006 Haemolysin-III related J5285_08660 PF01965 DJ-1/PfpI family J5285_08670 PF01641 SelR domain J5285_08675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5285_08675 PF13244 Domain of unknown function (DUF4040) J5285_08675 PF00361 Proton-conducting membrane transporter J5285_08680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J5285_08685 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5285_08690 PF00361 Proton-conducting membrane transporter J5285_08695 PF01899 Na+/H+ ion antiporter subunit J5285_08700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J5285_08705 PF03334 Na+/H+ antiporter subunit J5285_08710 PF05443 ROS/MUCR transcriptional regulator protein J5285_08735 PF02657 Fe-S metabolism associated domain J5285_08740 PF17264 Family of unknown function (DUF5330) J5285_08745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_08745 PF00512 His Kinase A (phospho-acceptor) domain J5285_08755 PF00665 Integrase core domain J5285_08765 PF01584 CheW-like domain J5285_08770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_08770 PF00672 HAMP domain J5285_08805 PF01609 Transposase DDE domain J5285_08810 PF00665 Integrase core domain J5285_08815 PF07995 Glucose / Sorbosone dehydrogenase J5285_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_08825 PF03466 LysR substrate binding domain J5285_08840 PF00905 Penicillin binding protein transpeptidase domain J5285_08840 PF00912 Transglycosylase J5285_08845 PF03692 Putative zinc- or iron-chelating domain J5285_08855 PF01037 Lrp/AsnC ligand binding domain J5285_08855 PF13404 AsnC-type helix-turn-helix domain J5285_08865 PF09278 MerR, DNA binding J5285_08865 PF00376 MerR family regulatory protein J5285_08870 PF00403 Heavy-metal-associated domain J5285_08875 PF04221 RelB antitoxin J5285_08885 PF00905 Penicillin binding protein transpeptidase domain J5285_08890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J5285_08910 PF08244 Glycosyl hydrolases family 32 C terminal J5285_08910 PF00251 Glycosyl hydrolases family 32 N-terminal domain J5285_08960 PF05973 Phage derived protein Gp49-like (DUF891) J5285_08970 PF04860 Phage portal protein J5285_08990 PF01609 Transposase DDE domain J5285_09000 PF00665 Integrase core domain J5285_09070 PF00072 Response regulator receiver domain J5285_09070 PF00486 Transcriptional regulatory protein, C terminal J5285_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_09090 PF03100 CcmE J5285_09095 PF01578 Cytochrome C assembly protein J5285_09095 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J5285_09100 PF03918 Cytochrome C biogenesis protein J5285_09105 PF13180 PDZ domain J5285_09110 PF00072 Response regulator receiver domain J5285_09110 PF00486 Transcriptional regulatory protein, C terminal J5285_09115 PF00512 His Kinase A (phospho-acceptor) domain J5285_09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_09115 PF00672 HAMP domain J5285_09120 PF03710 Glutamate-ammonia ligase adenylyltransferase J5285_09120 PF08335 GlnD PII-uridylyltransferase J5285_09135 PF00149 Calcineurin-like phosphoesterase J5285_09140 PF00989 PAS fold J5285_09140 PF00512 His Kinase A (phospho-acceptor) domain J5285_09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_09145 PF01433 Peptidase family M1 domain J5285_09145 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J5285_09145 PF11940 Domain of unknown function (DUF3458) Ig-like fold J5285_09150 PF00672 HAMP domain J5285_09150 PF02743 Cache domain J5285_09150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_09180 PF00012 Hsp70 protein J5285_09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_09185 PF03466 LysR substrate binding domain J5285_09190 PF00905 Penicillin binding protein transpeptidase domain J5285_09210 PF01565 FAD binding domain J5285_09210 PF02913 FAD linked oxidases, C-terminal domain J5285_09230 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA J5285_09240 PF08240 Alcohol dehydrogenase GroES-like domain J5285_09240 PF00107 Zinc-binding dehydrogenase J5285_09245 PF01638 HxlR-like helix-turn-helix J5285_09250 PF00171 Aldehyde dehydrogenase family J5285_09255 PF02673 Bacitracin resistance protein BacA J5285_09270 PF01769 Divalent cation transporter J5285_09270 PF03448 MgtE intracellular N domain J5285_09270 PF00571 CBS domain J5285_09275 PF07690 Major Facilitator Superfamily J5285_09280 PF00781 Diacylglycerol kinase catalytic domain J5285_09285 PF00202 Aminotransferase class-III J5285_09295 PF00535 Glycosyl transferase family 2 J5285_09310 PF09957 Bacterial antitoxin of type II TA system, VapB J5285_09315 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus J5285_09315 PF01048 Phosphorylase superfamily J5285_09340 PF00756 Putative esterase J5285_09340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J5285_09375 PF00155 Aminotransferase class I and II J5285_09385 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_09385 PF14759 Reductase C-terminal J5285_09390 PF03328 HpcH/HpaI aldolase/citrate lyase family J5285_09410 PF02530 Porin subfamily J5285_09415 PF02530 Porin subfamily J5285_09420 PF14718 Soluble lytic murein transglycosylase L domain J5285_09420 PF01464 Transglycosylase SLT domain J5285_09425 PF00701 Dihydrodipicolinate synthetase family J5285_09430 PF01668 SmpB protein J5285_09440 PF08448 PAS fold J5285_09440 PF08447 PAS fold J5285_09440 PF00990 Diguanylate cyclase, GGDEF domain J5285_09440 PF00563 EAL domain J5285_09450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_09460 PF01192 RNA polymerase Rpb6 J5285_09465 PF13291 ACT domain J5285_09465 PF04607 Region found in RelA / SpoT proteins J5285_09465 PF02824 TGS domain J5285_09480 PF01648 4'-phosphopantetheinyl transferase superfamily J5285_09485 PF10502 Signal peptidase, peptidase S26 J5285_09490 PF14622 Ribonuclease-III-like J5285_09490 PF00035 Double-stranded RNA binding motif J5285_09495 PF07650 KH domain J5285_09495 PF01926 50S ribosome-binding GTPase J5285_09500 PF00027 Cyclic nucleotide-binding domain J5285_09500 PF13545 Crp-like helix-turn-helix domain J5285_09505 PF00072 Response regulator receiver domain J5285_09510 PF11967 Recombination protein O N terminal J5285_09510 PF02565 Recombination protein O C terminal J5285_09515 PF07690 Major Facilitator Superfamily J5285_09530 PF01966 HD domain J5285_09540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_09550 PF00005 ABC transporter J5285_09555 PF00528 Binding-protein-dependent transport system inner membrane component J5285_09570 PF00924 Mechanosensitive ion channel J5285_09570 PF05552 Conserved TM helix J5285_09585 PF01966 HD domain J5285_09610 PF00293 NUDIX domain J5285_09620 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J5285_09630 PF17158 Membrane-associated sensor, integral membrane domain J5285_09630 PF00990 Diguanylate cyclase, GGDEF domain J5285_09635 PF01066 CDP-alcohol phosphatidyltransferase J5285_09640 PF02666 Phosphatidylserine decarboxylase J5285_09645 PF00664 ABC transporter transmembrane region J5285_09645 PF00005 ABC transporter J5285_09650 PF01476 LysM domain J5285_09655 PF03641 Possible lysine decarboxylase J5285_09660 PF00892 EamA-like transporter family J5285_09665 PF00561 alpha/beta hydrolase fold J5285_09685 PF04480 Protein of unknown function (DUF559) J5285_09695 PF09190 DALR domain J5285_09695 PF01406 tRNA synthetases class I (C) catalytic domain J5285_09700 PF00106 short chain dehydrogenase J5285_09705 PF01609 Transposase DDE domain J5285_09710 PF00156 Phosphoribosyl transferase domain J5285_09710 PF13537 Glutamine amidotransferase domain J5285_09715 PF02674 Colicin V production protein J5285_09720 PF18073 Rubredoxin metal binding domain J5285_09720 PF06745 KaiC J5285_09735 PF01168 Alanine racemase, N-terminal domain J5285_09735 PF00842 Alanine racemase, C-terminal domain J5285_09740 PF00664 ABC transporter transmembrane region J5285_09740 PF00005 ABC transporter J5285_09745 PF03796 DnaB-like helicase C terminal domain J5285_09745 PF00772 DnaB-like helicase N terminal domain J5285_09760 PF13533 Biotin-lipoyl like J5285_09775 PF01281 Ribosomal protein L9, N-terminal domain J5285_09775 PF03948 Ribosomal protein L9, C-terminal domain J5285_09785 PF01084 Ribosomal protein S18 J5285_09790 PF01250 Ribosomal protein S6 J5285_09805 PF00248 Aldo/keto reductase family J5285_09810 PF00698 Acyl transferase domain J5285_09820 PF00550 Phosphopantetheine attachment site J5285_09825 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_09825 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_09830 PF02618 YceG-like family J5285_09835 PF03755 YicC-like family, N-terminal region J5285_09835 PF08340 Domain of unknown function (DUF1732) J5285_09840 PF00625 Guanylate kinase J5285_09845 PF02660 Glycerol-3-phosphate acyltransferase J5285_09850 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin J5285_09855 PF01850 PIN domain J5285_09860 PF00398 Ribosomal RNA adenine dimethylase J5285_09865 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J5285_09875 PF03968 OstA-like protein J5285_09875 PF04453 LPS transport system D J5285_09890 PF00883 Cytosol aminopeptidase family, catalytic domain J5285_09890 PF02789 Cytosol aminopeptidase family, N-terminal domain J5285_09900 PF00990 Diguanylate cyclase, GGDEF domain J5285_09900 PF03707 Bacterial signalling protein N terminal repeat J5285_09900 PF00563 EAL domain J5285_09905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_09910 PF01522 Polysaccharide deacetylase J5285_09920 PF00005 ABC transporter J5285_09920 PF12848 ABC transporter J5285_09925 PF08447 PAS fold J5285_09925 PF00563 EAL domain J5285_09925 PF00990 Diguanylate cyclase, GGDEF domain J5285_09925 PF05231 MASE1 J5285_09925 PF13426 PAS domain J5285_09925 PF08448 PAS fold J5285_09930 PF13417 Glutathione S-transferase, N-terminal domain J5285_09935 PF00334 Nucleoside diphosphate kinase J5285_09975 PF02504 Fatty acid synthesis protein J5285_09980 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J5285_09980 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J5285_09985 PF00216 Bacterial DNA-binding protein J5285_09990 PF13411 MerR HTH family regulatory protein J5285_10010 PF02386 Cation transport protein J5285_10015 PF00585 C-terminal regulatory domain of Threonine dehydratase J5285_10015 PF00291 Pyridoxal-phosphate dependent enzyme J5285_10025 PF02525 Flavodoxin-like fold J5285_10030 PF03466 LysR substrate binding domain J5285_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_10045 PF04002 RadC-like JAB domain J5285_10050 PF00557 Metallopeptidase family M24 J5285_10055 PF17746 SfsA N-terminal OB domain J5285_10055 PF03749 Sugar fermentation stimulation protein RE domain J5285_10060 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J5285_10085 PF00440 Bacterial regulatory proteins, tetR family J5285_10090 PF00027 Cyclic nucleotide-binding domain J5285_10090 PF13545 Crp-like helix-turn-helix domain J5285_10095 PF04055 Radical SAM superfamily J5285_10100 PF00550 Phosphopantetheine attachment site J5285_10105 PF07977 FabA-like domain J5285_10110 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_10110 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_10115 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_10115 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_10120 PF00107 Zinc-binding dehydrogenase J5285_10120 PF08240 Alcohol dehydrogenase GroES-like domain J5285_10140 PF01925 Sulfite exporter TauE/SafE J5285_10145 PF01156 Inosine-uridine preferring nucleoside hydrolase J5285_10150 PF00155 Aminotransferase class I and II J5285_10155 PF03447 Homoserine dehydrogenase, NAD binding domain J5285_10155 PF00742 Homoserine dehydrogenase J5285_10155 PF01842 ACT domain J5285_10170 PF02872 5'-nucleotidase, C-terminal domain J5285_10170 PF00149 Calcineurin-like phosphoesterase J5285_10190 PF00581 Rhodanese-like domain J5285_10195 PF02272 DHHA1 domain J5285_10195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5285_10195 PF01411 tRNA synthetases class II (A) J5285_10200 PF00291 Pyridoxal-phosphate dependent enzyme J5285_10200 PF00571 CBS domain J5285_10205 PF03441 FAD binding domain of DNA photolyase J5285_10205 PF00875 DNA photolyase J5285_10215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J5285_10215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J5285_10250 PF01757 Acyltransferase family J5285_10265 PF06055 Exopolysaccharide synthesis, ExoD J5285_10270 PF09335 SNARE associated Golgi protein J5285_10295 PF13005 zinc-finger binding domain of transposase IS66 J5285_10295 PF03050 Transposase IS66 family J5285_10295 PF13817 IS66 C-terminal element J5285_10295 PF13007 Transposase C of IS166 homeodomain J5285_10300 PF05717 IS66 Orf2 like protein J5285_10305 PF01527 Transposase J5285_10320 PF02397 Bacterial sugar transferase J5285_10340 PF02628 Cytochrome oxidase assembly protein J5285_10345 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase J5285_10350 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5285_10355 PF00491 Arginase family J5285_10360 PF01757 Acyltransferase family J5285_10365 PF00380 Ribosomal protein S9/S16 J5285_10370 PF00572 Ribosomal protein L13 J5285_10380 PF13380 CoA binding domain J5285_10385 PF01053 Cys/Met metabolism PLP-dependent enzyme J5285_10400 PF00067 Cytochrome P450 J5285_10410 PF17151 Periplasmic sensor domain J5285_10410 PF00990 Diguanylate cyclase, GGDEF domain J5285_10415 PF00574 Clp protease J5285_10420 PF07724 AAA domain (Cdc48 subfamily) J5285_10420 PF10431 C-terminal, D2-small domain, of ClpB protein J5285_10420 PF06689 ClpX C4-type zinc finger J5285_10425 PF05362 Lon protease (S16) C-terminal proteolytic domain J5285_10425 PF02190 ATP-dependent protease La (LON) substrate-binding domain J5285_10425 PF00004 ATPase family associated with various cellular activities (AAA) J5285_10430 PF00216 Bacterial DNA-binding protein J5285_10435 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J5285_10440 PF13378 Enolase C-terminal domain-like J5285_10440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_10445 PF00701 Dihydrodipicolinate synthetase family J5285_10450 PF01370 NAD dependent epimerase/dehydratase family J5285_10470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J5285_10475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J5285_10480 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J5285_10490 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J5285_10505 PF10531 SLBB domain J5285_10505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J5285_10505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J5285_10510 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J5285_10510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J5285_10510 PF00384 Molybdopterin oxidoreductase J5285_10515 PF00146 NADH dehydrogenase J5285_10520 PF12838 4Fe-4S dicluster domain J5285_10525 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J5285_10530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J5285_10535 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J5285_10535 PF00361 Proton-conducting membrane transporter J5285_10540 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J5285_10540 PF00361 Proton-conducting membrane transporter J5285_10545 PF00361 Proton-conducting membrane transporter J5285_10550 PF02237 Biotin protein ligase C terminal domain J5285_10550 PF03099 Biotin/lipoate A/B protein ligase family J5285_10550 PF03309 Type III pantothenate kinase J5285_10555 PF12706 Beta-lactamase superfamily domain J5285_10555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J5285_10555 PF17770 Ribonuclease J C-terminal domain J5285_10570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5285_10570 PF03129 Anticodon binding domain J5285_10575 PF12704 MacB-like periplasmic core domain J5285_10575 PF02687 FtsX-like permease family J5285_10580 PF00005 ABC transporter J5285_10585 PF02811 PHP domain J5285_10585 PF14579 Helix-hairpin-helix motif J5285_10585 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5285_10585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5285_10600 PF00817 impB/mucB/samB family J5285_10600 PF11799 impB/mucB/samB family C-terminal domain J5285_10615 PF00072 Response regulator receiver domain J5285_10620 PF00072 Response regulator receiver domain J5285_10620 PF00990 Diguanylate cyclase, GGDEF domain J5285_10625 PF00471 Ribosomal protein L33 J5285_10645 PF00575 S1 RNA binding domain J5285_10645 PF00773 RNB domain J5285_10645 PF08461 Ribonuclease R winged-helix domain J5285_10645 PF17876 Cold shock domain J5285_10645 PF08206 Ribonuclease B OB domain J5285_10650 PF01396 Topoisomerase DNA binding C4 zinc finger J5285_10650 PF13368 Topoisomerase C-terminal repeat J5285_10650 PF01751 Toprim domain J5285_10650 PF01131 DNA topoisomerase J5285_10660 PF17782 DprA winged helix domain J5285_10660 PF02481 DNA recombination-mediator protein A J5285_10665 PF02660 Glycerol-3-phosphate acyltransferase J5285_10670 PF01979 Amidohydrolase family J5285_10675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J5285_10675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J5285_10680 PF18158 Adaptive response protein AidB N-terminal domain J5285_10680 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_10680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_10705 PF03652 Holliday junction resolvase J5285_10710 PF03831 PhnA domain J5285_10710 PF08274 PhnA Zinc-Ribbon J5285_10725 PF02686 Glu-tRNAGln amidotransferase C subunit J5285_10730 PF01425 Amidase J5285_10735 PF00583 Acetyltransferase (GNAT) family J5285_10755 PF02934 GatB/GatE catalytic domain J5285_10755 PF02637 GatB domain J5285_10760 PF00583 Acetyltransferase (GNAT) family J5285_10780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J5285_10785 PF00289 Biotin carboxylase, N-terminal domain J5285_10785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_10785 PF02785 Biotin carboxylase C-terminal domain J5285_10790 PF00364 Biotin-requiring enzyme J5285_10795 PF01220 Dehydroquinase class II J5285_10805 PF00155 Aminotransferase class I and II J5285_10815 PF13581 Histidine kinase-like ATPase domain J5285_10815 PF07536 HWE histidine kinase J5285_10815 PF13426 PAS domain J5285_10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_10820 PF13426 PAS domain J5285_10820 PF00072 Response regulator receiver domain J5285_10825 PF00072 Response regulator receiver domain J5285_10835 PF13091 PLD-like domain J5285_10845 PF13660 Domain of unknown function (DUF4147) J5285_10845 PF05161 MOFRL family J5285_10850 PF09335 SNARE associated Golgi protein J5285_10860 PF02272 DHHA1 domain J5285_10860 PF01368 DHH family J5285_10860 PF17768 RecJ OB domain J5285_10880 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_10880 PF06426 Serine acetyltransferase, N-terminal J5285_10885 PF00561 alpha/beta hydrolase fold J5285_10895 PF01494 FAD binding domain J5285_10900 PF01053 Cys/Met metabolism PLP-dependent enzyme J5285_10905 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_10910 PF00528 Binding-protein-dependent transport system inner membrane component J5285_10915 PF00528 Binding-protein-dependent transport system inner membrane component J5285_10920 PF00005 ABC transporter J5285_10925 PF00582 Universal stress protein family J5285_10930 PF02464 Competence-damaged protein J5285_10930 PF18146 Damage-inducible protein CinA KH domain J5285_10930 PF00994 Probable molybdopterin binding domain J5285_10935 PF03358 NADPH-dependent FMN reductase J5285_10980 PF00111 2Fe-2S iron-sulfur cluster binding domain J5285_10990 PF00809 Pterin binding enzyme J5285_10995 PF02152 Dihydroneopterin aldolase J5285_11000 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J5285_11010 PF05128 Domain of unknown function (DUF697) J5285_11015 PF04317 YcjX-like family, DUF463 J5285_11025 PF01258 Prokaryotic dksA/traR C4-type zinc finger J5285_11040 PF02699 Preprotein translocase subunit J5285_11045 PF07549 SecD/SecF GG Motif J5285_11045 PF02355 Protein export membrane protein J5285_11095 PF05697 Bacterial trigger factor protein (TF) J5285_11095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J5285_11095 PF05698 Bacterial trigger factor protein (TF) C-terminus J5285_11110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5285_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_11120 PF00884 Sulfatase J5285_11125 PF00795 Carbon-nitrogen hydrolase J5285_11125 PF02540 NAD synthase J5285_11130 PF07676 WD40-like Beta Propeller Repeat J5285_11135 PF00881 Nitroreductase family J5285_11145 PF00390 Malic enzyme, N-terminal domain J5285_11145 PF03949 Malic enzyme, NAD binding domain J5285_11145 PF01515 Phosphate acetyl/butaryl transferase J5285_11155 PF13378 Enolase C-terminal domain-like J5285_11155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_11160 PF02405 Permease MlaE J5285_11165 PF00005 ABC transporter J5285_11175 PF03886 ABC-type transport auxiliary lipoprotein component J5285_11175 PF02470 MlaD protein J5285_11185 PF00285 Citrate synthase, C-terminal domain J5285_11195 PF00043 Glutathione S-transferase, C-terminal domain J5285_11195 PF13417 Glutathione S-transferase, N-terminal domain J5285_11205 PF01726 LexA DNA binding domain J5285_11205 PF00717 Peptidase S24-like J5285_11210 PF00793 DAHP synthetase I family J5285_11215 PF03952 Enolase, N-terminal domain J5285_11215 PF00113 Enolase, C-terminal TIM barrel domain J5285_11230 PF02683 Cytochrome C biogenesis protein transmembrane region J5285_11235 PF03547 Membrane transport protein J5285_11240 PF01494 FAD binding domain J5285_11250 PF00005 ABC transporter J5285_11260 PF02653 Branched-chain amino acid transport system / permease component J5285_11265 PF02608 ABC transporter substrate-binding protein PnrA-like J5285_11280 PF01327 Polypeptide deformylase J5285_11290 PF00384 Molybdopterin oxidoreductase J5285_11295 PF00571 CBS domain J5285_11295 PF01769 Divalent cation transporter J5285_11295 PF03448 MgtE intracellular N domain J5285_11300 PF00376 MerR family regulatory protein J5285_11300 PF09278 MerR, DNA binding J5285_11305 PF00990 Diguanylate cyclase, GGDEF domain J5285_11305 PF03707 Bacterial signalling protein N terminal repeat J5285_11305 PF00563 EAL domain J5285_11310 PF00563 EAL domain J5285_11310 PF00990 Diguanylate cyclase, GGDEF domain J5285_11310 PF03707 Bacterial signalling protein N terminal repeat J5285_11325 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J5285_11335 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5285_11350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J5285_11350 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J5285_11365 PF13746 4Fe-4S dicluster domain J5285_11365 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J5285_11365 PF12801 4Fe-4S binding domain J5285_11370 PF05751 FixH J5285_11380 PF03597 Cytochrome oxidase maturation protein cbb3-type J5285_11385 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J5285_11385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5285_11400 PF00248 Aldo/keto reductase family J5285_11410 PF08543 Phosphomethylpyrimidine kinase J5285_11415 PF01751 Toprim domain J5285_11415 PF00986 DNA gyrase B subunit, carboxyl terminus J5285_11415 PF00204 DNA gyrase B J5285_11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_11425 PF00121 Triosephosphate isomerase J5285_11430 PF03840 Preprotein translocase SecG subunit J5285_11435 PF06418 CTP synthase N-terminus J5285_11435 PF00117 Glutamine amidotransferase class-I J5285_11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_11450 PF00512 His Kinase A (phospho-acceptor) domain J5285_11450 PF08448 PAS fold J5285_11450 PF13188 PAS domain J5285_11450 PF00072 Response regulator receiver domain J5285_11455 PF00072 Response regulator receiver domain J5285_11455 PF00196 Bacterial regulatory proteins, luxR family J5285_11460 PF02617 ATP-dependent Clp protease adaptor protein ClpS J5285_11465 PF00004 ATPase family associated with various cellular activities (AAA) J5285_11465 PF07724 AAA domain (Cdc48 subfamily) J5285_11465 PF17871 AAA lid domain J5285_11465 PF02861 Clp amino terminal domain, pathogenicity island component J5285_11465 PF10431 C-terminal, D2-small domain, of ClpB protein J5285_11500 PF00313 'Cold-shock' DNA-binding domain J5285_11505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_11515 PF00005 ABC transporter J5285_11515 PF00571 CBS domain J5285_11520 PF01914 MarC family integral membrane protein J5285_11525 PF03989 DNA gyrase C-terminal domain, beta-propeller J5285_11525 PF00521 DNA gyrase/topoisomerase IV, subunit A J5285_11570 PF01339 CheB methylesterase J5285_11570 PF01739 CheR methyltransferase, SAM binding domain J5285_11570 PF03705 CheR methyltransferase, all-alpha domain J5285_11570 PF08448 PAS fold J5285_11580 PF01223 DNA/RNA non-specific endonuclease J5285_11585 PF00756 Putative esterase J5285_11595 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J5285_11600 PF00072 Response regulator receiver domain J5285_11600 PF00196 Bacterial regulatory proteins, luxR family J5285_11605 PF05532 CsbD-like J5285_11625 PF03330 Lytic transglycolase J5285_11625 PF05036 Sporulation related domain J5285_11630 PF00768 D-alanyl-D-alanine carboxypeptidase J5285_11630 PF07943 Penicillin-binding protein 5, C-terminal domain J5285_11635 PF02223 Thymidylate kinase J5285_11640 PF09115 DNA polymerase III, delta subunit, C terminal J5285_11650 PF08264 Anticodon-binding domain of tRNA J5285_11650 PF09334 tRNA synthetases class I (M) J5285_11655 PF01026 TatD related DNase J5285_11660 PF03099 Biotin/lipoate A/B protein ligase family J5285_11660 PF12706 Beta-lactamase superfamily domain J5285_11665 PF00654 Voltage gated chloride channel J5285_11670 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_11690 PF07690 Major Facilitator Superfamily J5285_11705 PF13419 Haloacid dehalogenase-like hydrolase J5285_11710 PF00849 RNA pseudouridylate synthase J5285_11710 PF01479 S4 domain J5285_11715 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J5285_11745 PF01571 Aminomethyltransferase folate-binding domain J5285_11745 PF08669 Glycine cleavage T-protein C-terminal barrel domain J5285_11750 PF01597 Glycine cleavage H-protein J5285_11755 PF02347 Glycine cleavage system P-protein J5285_11770 PF07690 Major Facilitator Superfamily J5285_11775 PF00175 Oxidoreductase NAD-binding domain J5285_11775 PF00970 Oxidoreductase FAD-binding domain J5285_11795 PF14824 Sirohaem biosynthesis protein central J5285_11795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5285_11795 PF10414 Sirohaem synthase dimerisation region J5285_11805 PF03819 MazG nucleotide pyrophosphohydrolase domain J5285_11810 PF00990 Diguanylate cyclase, GGDEF domain J5285_11815 PF16360 GTP-binding GTPase Middle Region J5285_11815 PF13167 GTP-binding GTPase N-terminal J5285_11815 PF01926 50S ribosome-binding GTPase J5285_11820 PF17209 Hfq protein J5285_11825 PF02080 TrkA-C domain J5285_11825 PF02254 TrkA-N domain J5285_11830 PF02954 Bacterial regulatory protein, Fis family J5285_11830 PF00072 Response regulator receiver domain J5285_11830 PF00158 Sigma-54 interaction domain J5285_11835 PF00989 PAS fold J5285_11835 PF00672 HAMP domain J5285_11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_11835 PF00512 His Kinase A (phospho-acceptor) domain J5285_11840 PF02954 Bacterial regulatory protein, Fis family J5285_11840 PF00072 Response regulator receiver domain J5285_11840 PF00158 Sigma-54 interaction domain J5285_11845 PF00512 His Kinase A (phospho-acceptor) domain J5285_11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_11845 PF00989 PAS fold J5285_11850 PF01207 Dihydrouridine synthase (Dus) J5285_11855 PF02542 YgbB family J5285_11855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J5285_11860 PF02464 Competence-damaged protein J5285_11885 PF12833 Helix-turn-helix domain J5285_11885 PF12852 Cupin J5285_11890 PF00892 EamA-like transporter family J5285_11905 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J5285_11905 PF04055 Radical SAM superfamily J5285_11920 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_11920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5285_11930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5285_11930 PF00364 Biotin-requiring enzyme J5285_11930 PF02817 e3 binding domain J5285_11935 PF02780 Transketolase, C-terminal domain J5285_11935 PF00364 Biotin-requiring enzyme J5285_11935 PF02779 Transketolase, pyrimidine binding domain J5285_11940 PF00676 Dehydrogenase E1 component J5285_11955 PF00436 Single-strand binding protein family J5285_11960 PF17755 UvrA DNA-binding domain J5285_11960 PF17760 UvrA interaction domain J5285_11975 PF01207 Dihydrouridine synthase (Dus) J5285_11985 PF01557 Fumarylacetoacetate (FAA) hydrolase family J5285_11990 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_12000 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J5285_12010 PF00950 ABC 3 transport family J5285_12015 PF00005 ABC transporter J5285_12020 PF01297 Zinc-uptake complex component A periplasmic J5285_12025 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5285_12025 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5285_12030 PF00005 ABC transporter J5285_12030 PF00664 ABC transporter transmembrane region J5285_12035 PF01594 AI-2E family transporter J5285_12040 PF00583 Acetyltransferase (GNAT) family J5285_12075 PF03129 Anticodon binding domain J5285_12075 PF02824 TGS domain J5285_12075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5285_12075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5285_12085 PF01809 Putative membrane protein insertion efficiency factor J5285_12095 PF01227 GTP cyclohydrolase I J5285_12100 PF01502 Phosphoribosyl-AMP cyclohydrolase J5285_12105 PF01734 Patatin-like phospholipase J5285_12145 PF03315 Serine dehydratase beta chain J5285_12145 PF03313 Serine dehydratase alpha chain J5285_12160 PF07015 VirC1 protein J5285_12170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_12170 PF03466 LysR substrate binding domain J5285_12180 PF00128 Alpha amylase, catalytic domain J5285_12180 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J5285_12185 PF00486 Transcriptional regulatory protein, C terminal J5285_12185 PF00072 Response regulator receiver domain J5285_12190 PF12833 Helix-turn-helix domain J5285_12190 PF01965 DJ-1/PfpI family J5285_12195 PF01256 Carbohydrate kinase J5285_12195 PF03853 YjeF-related protein N-terminus J5285_12200 PF00543 Nitrogen regulatory protein P-II J5285_12205 PF00120 Glutamine synthetase, catalytic domain J5285_12205 PF03951 Glutamine synthetase, beta-Grasp domain J5285_12220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_12230 PF00892 EamA-like transporter family J5285_12240 PF03461 TRCF domain J5285_12240 PF17757 UvrB interaction domain J5285_12240 PF00271 Helicase conserved C-terminal domain J5285_12240 PF00270 DEAD/DEAH box helicase J5285_12240 PF02559 CarD-like/TRCF domain J5285_12250 PF00270 DEAD/DEAH box helicase J5285_12250 PF00271 Helicase conserved C-terminal domain J5285_12250 PF17191 RecG wedge domain J5285_12260 PF04715 Anthranilate synthase component I, N terminal region J5285_12260 PF00425 chorismate binding enzyme J5285_12260 PF00117 Glutamine amidotransferase class-I J5285_12265 PF01702 Queuine tRNA-ribosyltransferase J5285_12270 PF02547 Queuosine biosynthesis protein J5285_12275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J5285_12280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J5285_12285 PF01467 Cytidylyltransferase-like J5285_12305 PF00591 Glycosyl transferase family, a/b domain J5285_12305 PF02885 Glycosyl transferase family, helical bundle domain J5285_12310 PF00218 Indole-3-glycerol phosphate synthase J5285_12315 PF01967 MoaC family J5285_12320 PF00994 Probable molybdopterin binding domain J5285_12320 PF03454 MoeA C-terminal region (domain IV) J5285_12320 PF03453 MoeA N-terminal region (domain I and II) J5285_12330 PF01571 Aminomethyltransferase folate-binding domain J5285_12330 PF01266 FAD dependent oxidoreductase J5285_12330 PF16350 FAD dependent oxidoreductase central domain J5285_12330 PF08669 Glycine cleavage T-protein C-terminal barrel domain J5285_12335 PF00924 Mechanosensitive ion channel J5285_12335 PF12795 Mechanosensitive ion channel porin domain J5285_12335 PF12794 Mechanosensitive ion channel inner membrane domain 1 J5285_12370 PF02567 Phenazine biosynthesis-like protein J5285_12375 PF01513 ATP-NAD kinase J5285_12395 PF17092 Penicillin-binding protein OB-like domain J5285_12395 PF00912 Transglycosylase J5285_12395 PF00905 Penicillin binding protein transpeptidase domain J5285_12400 PF11741 AMIN domain J5285_12400 PF01520 N-acetylmuramoyl-L-alanine amidase J5285_12405 PF12111 Polyribonucleotide phosphorylase C terminal J5285_12405 PF10150 Ribonuclease E/G family J5285_12405 PF00575 S1 RNA binding domain J5285_12420 PF02684 Lipid-A-disaccharide synthetase J5285_12425 PF06230 LpxI C-terminal domain J5285_12425 PF17930 LpxI N-terminal domain J5285_12430 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J5285_12430 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_12435 PF07977 FabA-like domain J5285_12440 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J5285_12440 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_12445 PF07244 Surface antigen variable number repeat J5285_12445 PF01103 Surface antigen J5285_12450 PF02163 Peptidase family M50 J5285_12450 PF17820 PDZ domain J5285_12460 PF01255 Putative undecaprenyl diphosphate synthase J5285_12465 PF01765 Ribosome recycling factor J5285_12470 PF00696 Amino acid kinase family J5285_12475 PF00889 Elongation factor TS J5285_12480 PF00318 Ribosomal protein S2 J5285_12505 PF01230 HIT domain J5285_12515 PF13505 Outer membrane protein beta-barrel domain J5285_12540 PF13533 Biotin-lipoyl like J5285_12545 PF00005 ABC transporter J5285_12545 PF02687 FtsX-like permease family J5285_12545 PF12704 MacB-like periplasmic core domain J5285_12550 PF00005 ABC transporter J5285_12550 PF02687 FtsX-like permease family J5285_12550 PF12704 MacB-like periplasmic core domain J5285_12555 PF01272 Transcription elongation factor, GreA/GreB, C-term J5285_12555 PF03449 Transcription elongation factor, N-terminal J5285_12565 PF01521 Iron-sulphur cluster biosynthesis J5285_12570 PF01883 Iron-sulfur cluster assembly protein J5285_12575 PF00266 Aminotransferase class-V J5285_12580 PF01458 Uncharacterized protein family (UPF0051) J5285_12585 PF00005 ABC transporter J5285_12590 PF01458 Uncharacterized protein family (UPF0051) J5285_12595 PF00266 Aminotransferase class-V J5285_12600 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J5285_12615 PF03702 Anhydro-N-acetylmuramic acid kinase J5285_12620 PF00579 tRNA synthetases class I (W and Y) J5285_12635 PF01202 Shikimate kinase J5285_12645 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J5285_12645 PF00586 AIR synthase related protein, N-terminal domain J5285_12645 PF02769 AIR synthase related protein, C-terminal domain J5285_12665 PF01522 Polysaccharide deacetylase J5285_12670 PF00462 Glutaredoxin J5285_12675 PF07690 Major Facilitator Superfamily J5285_12680 PF00459 Inositol monophosphatase family J5285_12685 PF00459 Inositol monophosphatase family J5285_12690 PF01171 PP-loop family J5285_12695 PF04960 Glutaminase J5285_12700 PF03734 L,D-transpeptidase catalytic domain J5285_12700 PF01471 Putative peptidoglycan binding domain J5285_12705 PF00206 Lyase J5285_12705 PF10415 Fumarase C C-terminus J5285_12710 PF00990 Diguanylate cyclase, GGDEF domain J5285_12710 PF17158 Membrane-associated sensor, integral membrane domain J5285_12720 PF02254 TrkA-N domain J5285_12720 PF00999 Sodium/hydrogen exchanger family J5285_12730 PF06463 Molybdenum Cofactor Synthesis C J5285_12730 PF04055 Radical SAM superfamily J5285_12735 PF00892 EamA-like transporter family J5285_12740 PF07690 Major Facilitator Superfamily J5285_12745 PF12804 MobA-like NTP transferase domain J5285_12750 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J5285_12755 PF01551 Peptidase family M23 J5285_12755 PF01476 LysM domain J5285_12765 PF01975 Survival protein SurE J5285_12770 PF02403 Seryl-tRNA synthetase N-terminal domain J5285_12770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J5285_12775 PF00902 Sec-independent protein translocase protein (TatC) J5285_12780 PF02416 mttA/Hcf106 family J5285_12785 PF02416 mttA/Hcf106 family J5285_12790 PF04079 Segregation and condensation complex subunit ScpB J5285_12795 PF02616 Segregation and condensation protein ScpA J5285_12800 PF00933 Glycosyl hydrolase family 3 N terminal domain J5285_12810 PF03485 Arginyl tRNA synthetase N terminal domain J5285_12810 PF05746 DALR anticodon binding domain J5285_12810 PF00750 tRNA synthetases class I (R) J5285_12815 PF01966 HD domain J5285_12815 PF13286 Phosphohydrolase-associated domain J5285_12820 PF01521 Iron-sulphur cluster biosynthesis J5285_12835 PF08238 Sel1 repeat J5285_12850 PF00133 tRNA synthetases class I (I, L, M and V) J5285_12850 PF08264 Anticodon-binding domain of tRNA J5285_12850 PF10458 Valyl tRNA synthetase tRNA binding arm J5285_12860 PF00578 AhpC/TSA family J5285_12865 PF01551 Peptidase family M23 J5285_12865 PF08525 Opacity-associated protein A N-terminal motif J5285_12865 PF01476 LysM domain J5285_12870 PF00271 Helicase conserved C-terminal domain J5285_12870 PF00270 DEAD/DEAH box helicase J5285_12885 PF00834 Ribulose-phosphate 3 epimerase family J5285_12890 PF00206 Lyase J5285_12890 PF10397 Adenylosuccinate lyase C-terminus J5285_12900 PF00990 Diguanylate cyclase, GGDEF domain J5285_12900 PF00563 EAL domain J5285_12900 PF03707 Bacterial signalling protein N terminal repeat J5285_12905 PF01259 SAICAR synthetase J5285_12910 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase J5285_12930 PF00155 Aminotransferase class I and II J5285_12930 PF00392 Bacterial regulatory proteins, gntR family J5285_12935 PF00990 Diguanylate cyclase, GGDEF domain J5285_12935 PF00072 Response regulator receiver domain J5285_12940 PF00156 Phosphoribosyl transferase domain J5285_12950 PF08471 Class II vitamin B12-dependent ribonucleotide reductase J5285_12950 PF02867 Ribonucleotide reductase, barrel domain J5285_12955 PF04480 Protein of unknown function (DUF559) J5285_12960 PF01474 Class-II DAHP synthetase family J5285_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_12965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5285_12975 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J5285_12980 PF13419 Haloacid dehalogenase-like hydrolase J5285_12985 PF00163 Ribosomal protein S4/S9 N-terminal domain J5285_12985 PF01479 S4 domain J5285_12990 PF03741 Integral membrane protein TerC family J5285_12995 PF01609 Transposase DDE domain J5285_13005 PF00892 EamA-like transporter family J5285_13010 PF01810 LysE type translocator J5285_13015 PF07690 Major Facilitator Superfamily J5285_13025 PF01177 Asp/Glu/Hydantoin racemase J5285_13030 PF00588 SpoU rRNA Methylase family J5285_13040 PF00180 Isocitrate/isopropylmalate dehydrogenase J5285_13060 PF03099 Biotin/lipoate A/B protein ligase family J5285_13075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J5285_13075 PF02272 DHHA1 domain J5285_13075 PF01411 tRNA synthetases class II (A) J5285_13080 PF00154 recA bacterial DNA recombination protein J5285_13085 PF00294 pfkB family carbohydrate kinase J5285_13090 PF04227 Indigoidine synthase A like protein J5285_13100 PF00691 OmpA family J5285_13100 PF01389 OmpA-like transmembrane domain J5285_13105 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_13110 PF00528 Binding-protein-dependent transport system inner membrane component J5285_13115 PF00528 Binding-protein-dependent transport system inner membrane component J5285_13120 PF06233 Usg-like family J5285_13125 PF08241 Methyltransferase domain J5285_13130 PF13404 AsnC-type helix-turn-helix domain J5285_13130 PF01037 Lrp/AsnC ligand binding domain J5285_13135 PF03167 Uracil DNA glycosylase superfamily J5285_13145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_13145 PF00989 PAS fold J5285_13145 PF00512 His Kinase A (phospho-acceptor) domain J5285_13150 PF01219 Prokaryotic diacylglycerol kinase J5285_13155 PF02277 Phosphoribosyltransferase J5285_13160 PF02654 Cobalamin-5-phosphate synthase J5285_13185 PF01061 ABC-2 type transporter J5285_13190 PF00005 ABC transporter J5285_13205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_13205 PF08269 Cache domain J5285_13215 PF12002 MgsA AAA+ ATPase C terminal J5285_13215 PF16193 AAA C-terminal domain J5285_13215 PF00004 ATPase family associated with various cellular activities (AAA) J5285_13220 PF13180 PDZ domain J5285_13220 PF00595 PDZ domain J5285_13255 PF00920 Dehydratase family J5285_13260 PF03796 DnaB-like helicase C terminal domain J5285_13265 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family J5285_13270 PF00174 Oxidoreductase molybdopterin binding domain J5285_13275 PF01794 Ferric reductase like transmembrane component J5285_13280 PF00795 Carbon-nitrogen hydrolase J5285_13290 PF00486 Transcriptional regulatory protein, C terminal J5285_13305 PF01196 Ribosomal protein L17 J5285_13310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J5285_13310 PF01000 RNA polymerase Rpb3/RpoA insert domain J5285_13310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J5285_13315 PF00411 Ribosomal protein S11 J5285_13320 PF00416 Ribosomal protein S13/S18 J5285_13330 PF00344 SecY translocase J5285_13335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J5285_13340 PF00327 Ribosomal protein L30p/L7e J5285_13345 PF03719 Ribosomal protein S5, C-terminal domain J5285_13345 PF00333 Ribosomal protein S5, N-terminal domain J5285_13350 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J5285_13355 PF00347 Ribosomal protein L6 J5285_13360 PF00410 Ribosomal protein S8 J5285_13365 PF00253 Ribosomal protein S14p/S29e J5285_13370 PF00673 ribosomal L5P family C-terminus J5285_13370 PF00281 Ribosomal protein L5 J5285_13375 PF00467 KOW motif J5285_13375 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J5285_13380 PF00238 Ribosomal protein L14p/L23e J5285_13385 PF00366 Ribosomal protein S17 J5285_13390 PF00831 Ribosomal L29 protein J5285_13395 PF00252 Ribosomal protein L16p/L10e J5285_13400 PF07650 KH domain J5285_13400 PF00189 Ribosomal protein S3, C-terminal domain J5285_13405 PF00237 Ribosomal protein L22p/L17e J5285_13410 PF00203 Ribosomal protein S19 J5285_13415 PF03947 Ribosomal Proteins L2, C-terminal domain J5285_13415 PF00181 Ribosomal Proteins L2, RNA binding domain J5285_13420 PF00276 Ribosomal protein L23 J5285_13425 PF00573 Ribosomal protein L4/L1 family J5285_13430 PF00297 Ribosomal protein L3 J5285_13435 PF00338 Ribosomal protein S10p/S20e J5285_13440 PF03144 Elongation factor Tu domain 2 J5285_13440 PF00009 Elongation factor Tu GTP binding domain J5285_13440 PF03143 Elongation factor Tu C-terminal domain J5285_13445 PF00009 Elongation factor Tu GTP binding domain J5285_13445 PF03764 Elongation factor G, domain IV J5285_13445 PF14492 Elongation Factor G, domain II J5285_13445 PF00679 Elongation factor G C-terminus J5285_13445 PF03144 Elongation factor Tu domain 2 J5285_13450 PF00177 Ribosomal protein S7p/S5e J5285_13455 PF00164 Ribosomal protein S12/S23 J5285_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_13470 PF03466 LysR substrate binding domain J5285_13480 PF03717 Penicillin-binding Protein dimerisation domain J5285_13480 PF00905 Penicillin binding protein transpeptidase domain J5285_13485 PF03466 LysR substrate binding domain J5285_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_13495 PF05000 RNA polymerase Rpb1, domain 4 J5285_13495 PF04983 RNA polymerase Rpb1, domain 3 J5285_13495 PF04998 RNA polymerase Rpb1, domain 5 J5285_13495 PF04997 RNA polymerase Rpb1, domain 1 J5285_13495 PF00623 RNA polymerase Rpb1, domain 2 J5285_13500 PF04563 RNA polymerase beta subunit J5285_13500 PF04561 RNA polymerase Rpb2, domain 2 J5285_13500 PF04565 RNA polymerase Rpb2, domain 3 J5285_13500 PF10385 RNA polymerase beta subunit external 1 domain J5285_13500 PF00562 RNA polymerase Rpb2, domain 6 J5285_13500 PF04560 RNA polymerase Rpb2, domain 7 J5285_13505 PF16320 Ribosomal protein L7/L12 dimerisation domain J5285_13505 PF00542 Ribosomal protein L7/L12 C-terminal domain J5285_13510 PF00466 Ribosomal protein L10 J5285_13515 PF00687 Ribosomal protein L1p/L10e family J5285_13520 PF00298 Ribosomal protein L11, RNA binding domain J5285_13520 PF03946 Ribosomal protein L11, N-terminal domain J5285_13525 PF00467 KOW motif J5285_13525 PF02357 Transcription termination factor nusG J5285_13530 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J5285_13550 PF00009 Elongation factor Tu GTP binding domain J5285_13550 PF03143 Elongation factor Tu C-terminal domain J5285_13550 PF03144 Elongation factor Tu domain 2 J5285_13555 PF03741 Integral membrane protein TerC family J5285_13560 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme J5285_13580 PF08032 RNA 2'-O ribose methyltransferase substrate binding J5285_13580 PF00588 SpoU rRNA Methylase family J5285_13585 PF03061 Thioesterase superfamily J5285_13630 PF00271 Helicase conserved C-terminal domain J5285_13630 PF04851 Type III restriction enzyme, res subunit J5285_13630 PF02151 UvrB/uvrC motif J5285_13630 PF12344 Ultra-violet resistance protein B J5285_13630 PF17757 UvrB interaction domain J5285_13635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J5285_13635 PF00756 Putative esterase J5285_13655 PF00226 DnaJ domain J5285_13655 PF01556 DnaJ C terminal domain J5285_13655 PF00684 DnaJ central domain J5285_13675 PF17151 Periplasmic sensor domain J5285_13675 PF00990 Diguanylate cyclase, GGDEF domain J5285_13685 PF08402 TOBE domain J5285_13685 PF00005 ABC transporter J5285_13700 PF02567 Phenazine biosynthesis-like protein J5285_13705 PF00155 Aminotransferase class I and II J5285_13710 PF05025 RbsD / FucU transport protein family J5285_13720 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J5285_13720 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J5285_13725 PF00440 Bacterial regulatory proteins, tetR family J5285_13730 PF01638 HxlR-like helix-turn-helix J5285_13735 PF05368 NmrA-like family J5285_13740 PF06719 AraC-type transcriptional regulator N-terminus J5285_13740 PF12833 Helix-turn-helix domain J5285_13745 PF08240 Alcohol dehydrogenase GroES-like domain J5285_13745 PF00107 Zinc-binding dehydrogenase J5285_13750 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_13755 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J5285_13765 PF14490 Helix-hairpin-helix containing domain J5285_13765 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain J5285_13765 PF13538 UvrD-like helicase C-terminal domain J5285_13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_13770 PF00672 HAMP domain J5285_13780 PF00248 Aldo/keto reductase family J5285_13785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_13785 PF00672 HAMP domain J5285_13795 PF01842 ACT domain J5285_13795 PF10369 Small subunit of acetolactate synthase J5285_13800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5285_13800 PF00205 Thiamine pyrophosphate enzyme, central domain J5285_13800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5285_13825 PF00005 ABC transporter J5285_13835 PF00528 Binding-protein-dependent transport system inner membrane component J5285_13840 PF00296 Luciferase-like monooxygenase J5285_13850 PF13180 PDZ domain J5285_13865 PF01145 SPFH domain / Band 7 family J5285_13870 PF12221 Bacterial membrane protein N terminal J5285_13870 PF01145 SPFH domain / Band 7 family J5285_13875 PF00186 Dihydrofolate reductase J5285_13880 PF00303 Thymidylate synthase J5285_13935 PF02913 FAD linked oxidases, C-terminal domain J5285_13935 PF01565 FAD binding domain J5285_13940 PF00873 AcrB/AcrD/AcrF family J5285_13945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_13955 PF00580 UvrD/REP helicase N-terminal domain J5285_13955 PF13361 UvrD-like helicase C-terminal domain J5285_13980 PF00857 Isochorismatase family J5285_14000 PF00557 Metallopeptidase family M24 J5285_14000 PF01321 Creatinase/Prolidase N-terminal domain J5285_14015 PF02630 SCO1/SenC J5285_14030 PF01584 CheW-like domain J5285_14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_14045 PF03466 LysR substrate binding domain J5285_14050 PF00892 EamA-like transporter family J5285_14055 PF00583 Acetyltransferase (GNAT) family J5285_14060 PF00533 BRCA1 C Terminus (BRCT) domain J5285_14060 PF01653 NAD-dependent DNA ligase adenylation domain J5285_14060 PF03120 NAD-dependent DNA ligase OB-fold domain J5285_14060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J5285_14060 PF12826 Helix-hairpin-helix motif J5285_14075 PF01810 LysE type translocator J5285_14085 PF02463 RecF/RecN/SMC N terminal domain J5285_14090 PF13525 Outer membrane lipoprotein J5285_14095 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J5285_14100 PF00091 Tubulin/FtsZ family, GTPase domain J5285_14100 PF12327 FtsZ family, C-terminal domain J5285_14105 PF02491 SHS2 domain inserted in FTSA J5285_14110 PF08478 POTRA domain, FtsQ-type J5285_14110 PF03799 Cell division protein FtsQ J5285_14115 PF07478 D-ala D-ala ligase C-terminus J5285_14115 PF01820 D-ala D-ala ligase N-terminus J5285_14135 PF00083 Sugar (and other) transporter J5285_14135 PF07690 Major Facilitator Superfamily J5285_14140 PF01565 FAD binding domain J5285_14140 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J5285_14145 PF01225 Mur ligase family, catalytic domain J5285_14145 PF02875 Mur ligase family, glutamate ligase domain J5285_14145 PF08245 Mur ligase middle domain J5285_14150 PF03033 Glycosyltransferase family 28 N-terminal domain J5285_14150 PF04101 Glycosyltransferase family 28 C-terminal domain J5285_14155 PF01098 Cell cycle protein J5285_14160 PF08245 Mur ligase middle domain J5285_14160 PF02875 Mur ligase family, glutamate ligase domain J5285_14165 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J5285_14165 PF00953 Glycosyl transferase family 4 J5285_14170 PF01225 Mur ligase family, catalytic domain J5285_14170 PF08245 Mur ligase middle domain J5285_14170 PF02875 Mur ligase family, glutamate ligase domain J5285_14175 PF08245 Mur ligase middle domain J5285_14175 PF02875 Mur ligase family, glutamate ligase domain J5285_14175 PF01225 Mur ligase family, catalytic domain J5285_14180 PF03717 Penicillin-binding Protein dimerisation domain J5285_14180 PF00905 Penicillin binding protein transpeptidase domain J5285_14190 PF01795 MraW methylase family J5285_14195 PF02381 MraZ protein, putative antitoxin-like J5285_14245 PF01510 N-acetylmuramoyl-L-alanine amidase J5285_14250 PF00226 DnaJ domain J5285_14250 PF05099 Tellurite resistance protein TerB J5285_14255 PF00365 Phosphofructokinase J5285_14270 PF05035 2-keto-3-deoxy-galactonokinase J5285_14275 PF00701 Dihydrodipicolinate synthetase family J5285_14280 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_14280 PF13378 Enolase C-terminal domain-like J5285_14290 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14295 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14300 PF00005 ABC transporter J5285_14300 PF17912 MalK OB fold domain J5285_14305 PF16363 GDP-mannose 4,6 dehydratase J5285_14310 PF08450 SMP-30/Gluconolactonase/LRE-like region J5285_14325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_14330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_14335 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14340 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14340 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_14350 PF01522 Polysaccharide deacetylase J5285_14360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_14360 PF00005 ABC transporter J5285_14365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_14365 PF00005 ABC transporter J5285_14370 PF01546 Peptidase family M20/M25/M40 J5285_14370 PF07687 Peptidase dimerisation domain J5285_14375 PF00990 Diguanylate cyclase, GGDEF domain J5285_14380 PF01381 Helix-turn-helix J5285_14395 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J5285_14420 PF08212 Lipocalin-like domain J5285_14425 PF00480 ROK family J5285_14425 PF01325 Iron dependent repressor, N-terminal DNA binding domain J5285_14430 PF02449 Beta-galactosidase J5285_14430 PF08533 Beta-galactosidase C-terminal domain J5285_14430 PF08532 Beta-galactosidase trimerisation domain J5285_14435 PF17912 MalK OB fold domain J5285_14435 PF00005 ABC transporter J5285_14440 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14445 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14460 PF01266 FAD dependent oxidoreductase J5285_14465 PF00005 ABC transporter J5285_14470 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14480 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_14485 PF01037 Lrp/AsnC ligand binding domain J5285_14490 PF03466 LysR substrate binding domain J5285_14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_14495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5285_14495 PF00205 Thiamine pyrophosphate enzyme, central domain J5285_14495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5285_14500 PF07715 TonB-dependent Receptor Plug Domain J5285_14500 PF00593 TonB dependent receptor J5285_14505 PF00756 Putative esterase J5285_14510 PF00005 ABC transporter J5285_14520 PF01032 FecCD transport family J5285_14525 PF00392 Bacterial regulatory proteins, gntR family J5285_14525 PF07729 FCD domain J5285_14530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_14535 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14540 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_14540 PF00528 Binding-protein-dependent transport system inner membrane component J5285_14545 PF00005 ABC transporter J5285_14545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_14550 PF13378 Enolase C-terminal domain-like J5285_14550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_14555 PF13378 Enolase C-terminal domain-like J5285_14555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_14560 PF02530 Porin subfamily J5285_14565 PF16197 Ketoacyl-synthetase C-terminal extension J5285_14565 PF08240 Alcohol dehydrogenase GroES-like domain J5285_14565 PF08659 KR domain J5285_14565 PF14765 Polyketide synthase dehydratase J5285_14565 PF00550 Phosphopantetheine attachment site J5285_14565 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_14565 PF00698 Acyl transferase domain J5285_14565 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_14570 PF00155 Aminotransferase class I and II J5285_14575 PF00106 short chain dehydrogenase J5285_14580 PF07929 Plasmid pRiA4b ORF-3-like protein J5285_14585 PF13005 zinc-finger binding domain of transposase IS66 J5285_14585 PF13007 Transposase C of IS166 homeodomain J5285_14585 PF13817 IS66 C-terminal element J5285_14585 PF03050 Transposase IS66 family J5285_14590 PF05717 IS66 Orf2 like protein J5285_14600 PF00884 Sulfatase J5285_14605 PF05159 Capsule polysaccharide biosynthesis protein J5285_14610 PF02563 Polysaccharide biosynthesis/export protein J5285_14615 PF01061 ABC-2 type transporter J5285_14620 PF00005 ABC transporter J5285_14630 PF05159 Capsule polysaccharide biosynthesis protein J5285_14635 PF02719 Polysaccharide biosynthesis protein J5285_14640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family J5285_14645 PF02348 Cytidylyltransferase J5285_14655 PF03102 NeuB family J5285_14655 PF08666 SAF domain J5285_14660 PF05159 Capsule polysaccharide biosynthesis protein J5285_14665 PF13649 Methyltransferase domain J5285_14675 PF05717 IS66 Orf2 like protein J5285_14680 PF13007 Transposase C of IS166 homeodomain J5285_14680 PF03050 Transposase IS66 family J5285_14680 PF13817 IS66 C-terminal element J5285_14680 PF13005 zinc-finger binding domain of transposase IS66 J5285_14685 PF07929 Plasmid pRiA4b ORF-3-like protein J5285_14690 PF13505 Outer membrane protein beta-barrel domain J5285_14695 PF00665 Integrase core domain J5285_14695 PF13333 Integrase core domain J5285_14695 PF13276 HTH-like domain J5285_14700 PF17841 BID domain of Bartonella effector protein (Bep) J5285_14700 PF03389 MobA/MobL family J5285_14700 PF01443 Viral (Superfamily 1) RNA helicase J5285_14710 PF02534 Type IV secretory system Conjugative DNA transfer J5285_14720 PF13378 Enolase C-terminal domain-like J5285_14720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_14725 PF01970 Tripartite tricarboxylate transporter TctA family J5285_14730 PF07331 Tripartite tricarboxylate transporter TctB family J5285_14735 PF03401 Tripartite tricarboxylate transporter family receptor J5285_14740 PF00356 Bacterial regulatory proteins, lacI family J5285_14765 PF01022 Bacterial regulatory protein, arsR family J5285_14780 PF13784 Fic/DOC family N-terminal J5285_14780 PF02661 Fic/DOC family J5285_14815 PF00313 'Cold-shock' DNA-binding domain J5285_14835 PF00999 Sodium/hydrogen exchanger family J5285_14850 PF00072 Response regulator receiver domain J5285_14850 PF00486 Transcriptional regulatory protein, C terminal J5285_14860 PF00440 Bacterial regulatory proteins, tetR family J5285_14890 PF02082 Transcriptional regulator J5285_14940 PF03050 Transposase IS66 family J5285_14940 PF13817 IS66 C-terminal element J5285_14940 PF13007 Transposase C of IS166 homeodomain J5285_14940 PF13005 zinc-finger binding domain of transposase IS66 J5285_14945 PF05717 IS66 Orf2 like protein J5285_14950 PF01527 Transposase J5285_15080 PF02355 Protein export membrane protein J5285_15080 PF07549 SecD/SecF GG Motif J5285_15105 PF13358 DDE superfamily endonuclease J5285_15110 PF13358 DDE superfamily endonuclease J5285_15135 PF07549 SecD/SecF GG Motif J5285_15135 PF02355 Protein export membrane protein J5285_15180 PF04717 Type VI secretion system, phage-baseplate injector J5285_15200 PF00440 Bacterial regulatory proteins, tetR family J5285_15210 PF00072 Response regulator receiver domain J5285_15210 PF00486 Transcriptional regulatory protein, C terminal J5285_15225 PF00999 Sodium/hydrogen exchanger family J5285_15235 PF03050 Transposase IS66 family J5285_15235 PF13005 zinc-finger binding domain of transposase IS66 J5285_15235 PF13007 Transposase C of IS166 homeodomain J5285_15235 PF13817 IS66 C-terminal element J5285_15245 PF01527 Transposase J5285_15250 PF08240 Alcohol dehydrogenase GroES-like domain J5285_15250 PF00107 Zinc-binding dehydrogenase J5285_15255 PF12833 Helix-turn-helix domain J5285_15255 PF02311 AraC-like ligand binding domain J5285_15260 PF01494 FAD binding domain J5285_15270 PF13378 Enolase C-terminal domain-like J5285_15270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_15275 PF00701 Dihydrodipicolinate synthetase family J5285_15280 PF07729 FCD domain J5285_15280 PF00392 Bacterial regulatory proteins, gntR family J5285_15285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_15290 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15295 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_15295 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_15300 PF00005 ABC transporter J5285_15305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_15305 PF00005 ABC transporter J5285_15335 PF00989 PAS fold J5285_15335 PF16736 Single Cache-like J5285_15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_15335 PF00512 His Kinase A (phospho-acceptor) domain J5285_15340 PF01339 CheB methylesterase J5285_15345 PF01739 CheR methyltransferase, SAM binding domain J5285_15345 PF03705 CheR methyltransferase, all-alpha domain J5285_15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_15350 PF00512 His Kinase A (phospho-acceptor) domain J5285_15350 PF09308 LuxQ, periplasmic J5285_15350 PF00072 Response regulator receiver domain J5285_15365 PF13581 Histidine kinase-like ATPase domain J5285_15365 PF07568 Histidine kinase J5285_15365 PF13426 PAS domain J5285_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_15370 PF13426 PAS domain J5285_15370 PF00072 Response regulator receiver domain J5285_15375 PF13426 PAS domain J5285_15375 PF08447 PAS fold J5285_15375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_15380 PF00990 Diguanylate cyclase, GGDEF domain J5285_15380 PF03707 Bacterial signalling protein N terminal repeat J5285_15380 PF00563 EAL domain J5285_15385 PF01850 PIN domain J5285_15395 PF00268 Ribonucleotide reductase, small chain J5285_15400 PF02867 Ribonucleotide reductase, barrel domain J5285_15400 PF00317 Ribonucleotide reductase, all-alpha domain J5285_15400 PF08343 Ribonucleotide reductase N-terminal J5285_15405 PF07972 NrdI Flavodoxin like J5285_15410 PF00462 Glutaredoxin J5285_15415 PF00593 TonB dependent receptor J5285_15415 PF07715 TonB-dependent Receptor Plug Domain J5285_15420 PF00005 ABC transporter J5285_15425 PF01032 FecCD transport family J5285_15430 PF01032 FecCD transport family J5285_15445 PF07536 HWE histidine kinase J5285_15445 PF08447 PAS fold J5285_15445 PF13426 PAS domain J5285_15450 PF00072 Response regulator receiver domain J5285_15455 PF00072 Response regulator receiver domain J5285_15455 PF13426 PAS domain J5285_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_15460 PF13426 PAS domain J5285_15460 PF00072 Response regulator receiver domain J5285_15465 PF01594 AI-2E family transporter J5285_15470 PF08448 PAS fold J5285_15470 PF00990 Diguanylate cyclase, GGDEF domain J5285_15470 PF08447 PAS fold J5285_15470 PF00563 EAL domain J5285_15475 PF08447 PAS fold J5285_15475 PF13426 PAS domain J5285_15475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_15480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_15480 PF00672 HAMP domain J5285_15490 PF01638 HxlR-like helix-turn-helix J5285_15500 PF00723 Glycosyl hydrolases family 15 J5285_15510 PF08450 SMP-30/Gluconolactonase/LRE-like region J5285_15520 PF02806 Alpha amylase, C-terminal all-beta domain J5285_15520 PF00128 Alpha amylase, catalytic domain J5285_15530 PF08281 Sigma-70, region 4 J5285_15530 PF04542 Sigma-70 region 2 J5285_15540 PF00561 alpha/beta hydrolase fold J5285_15565 PF04221 RelB antitoxin J5285_15575 PF13823 Alcohol dehydrogenase GroES-associated J5285_15575 PF08240 Alcohol dehydrogenase GroES-like domain J5285_15575 PF00107 Zinc-binding dehydrogenase J5285_15585 PF00795 Carbon-nitrogen hydrolase J5285_15585 PF02540 NAD synthase J5285_15615 PF16363 GDP-mannose 4,6 dehydratase J5285_15620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J5285_15620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5285_15625 PF03450 CO dehydrogenase flavoprotein C-terminal domain J5285_15625 PF00941 FAD binding domain in molybdopterin dehydrogenase J5285_15630 PF00111 2Fe-2S iron-sulfur cluster binding domain J5285_15630 PF01799 [2Fe-2S] binding domain J5285_15635 PF13478 XdhC Rossmann domain J5285_15635 PF02625 XdhC and CoxI family J5285_15640 PF17925 Tetracyclin repressor-like, C-terminal domain J5285_15640 PF00440 Bacterial regulatory proteins, tetR family J5285_15650 PF08402 TOBE domain J5285_15650 PF00005 ABC transporter J5285_15660 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15665 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15670 PF01177 Asp/Glu/Hydantoin racemase J5285_15680 PF00486 Transcriptional regulatory protein, C terminal J5285_15680 PF00072 Response regulator receiver domain J5285_15685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_15690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_15690 PF00005 ABC transporter J5285_15695 PF03841 L-seryl-tRNA selenium transferase J5285_15710 PF01979 Amidohydrolase family J5285_15715 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_15715 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15720 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_15730 PF00753 Metallo-beta-lactamase superfamily J5285_15730 PF04273 Putative phosphatase (DUF442) J5285_15735 PF03781 Sulfatase-modifying factor enzyme 1 J5285_15745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_15750 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15750 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_15755 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_15765 PF00581 Rhodanese-like domain J5285_15770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_15770 PF00005 ABC transporter J5285_15775 PF07729 FCD domain J5285_15775 PF00392 Bacterial regulatory proteins, gntR family J5285_15780 PF01177 Asp/Glu/Hydantoin racemase J5285_15785 PF01979 Amidohydrolase family J5285_15790 PF00701 Dihydrodipicolinate synthetase family J5285_15800 PF00155 Aminotransferase class I and II J5285_15820 PF00005 ABC transporter J5285_15820 PF17912 MalK OB fold domain J5285_15820 PF03459 TOBE domain J5285_15825 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15830 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15835 PF13416 Bacterial extracellular solute-binding protein J5285_15845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_15845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_15850 PF00356 Bacterial regulatory proteins, lacI family J5285_15865 PF03466 LysR substrate binding domain J5285_15865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_15875 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15880 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15885 PF00005 ABC transporter J5285_15885 PF08402 TOBE domain J5285_15890 PF13454 FAD-NAD(P)-binding J5285_15925 PF01263 Aldose 1-epimerase J5285_15930 PF13378 Enolase C-terminal domain-like J5285_15930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_15935 PF00005 ABC transporter J5285_15935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_15940 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15940 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_15945 PF00528 Binding-protein-dependent transport system inner membrane component J5285_15950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_15960 PF08450 SMP-30/Gluconolactonase/LRE-like region J5285_15965 PF00701 Dihydrodipicolinate synthetase family J5285_15970 PF00270 DEAD/DEAH box helicase J5285_15970 PF00271 Helicase conserved C-terminal domain J5285_15970 PF00570 HRDC domain J5285_15970 PF09382 RQC domain J5285_15970 PF16124 RecQ zinc-binding J5285_15980 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_15990 PF01547 Bacterial extracellular solute-binding protein J5285_16000 PF03459 TOBE domain J5285_16000 PF00005 ABC transporter J5285_16000 PF17912 MalK OB fold domain J5285_16005 PF07470 Glycosyl Hydrolase Family 88 J5285_16010 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16015 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16030 PF07729 FCD domain J5285_16030 PF00392 Bacterial regulatory proteins, gntR family J5285_16040 PF00005 ABC transporter J5285_16040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_16050 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_16050 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16055 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_16065 PF00392 Bacterial regulatory proteins, gntR family J5285_16065 PF07702 UTRA domain J5285_16070 PF12704 MacB-like periplasmic core domain J5285_16070 PF02687 FtsX-like permease family J5285_16070 PF00005 ABC transporter J5285_16075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_16085 PF00072 Response regulator receiver domain J5285_16085 PF00486 Transcriptional regulatory protein, C terminal J5285_16090 PF00672 HAMP domain J5285_16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_16090 PF00512 His Kinase A (phospho-acceptor) domain J5285_16120 PF00004 ATPase family associated with various cellular activities (AAA) J5285_16120 PF07724 AAA domain (Cdc48 subfamily) J5285_16120 PF17871 AAA lid domain J5285_16120 PF10431 C-terminal, D2-small domain, of ClpB protein J5285_16130 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 J5285_16135 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath J5285_16155 PF05947 Type VI secretion system, TssF J5285_16170 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE J5285_16175 PF00691 OmpA family J5285_16175 PF13677 Membrane MotB of proton-channel complex MotA/MotB J5285_16180 PF06761 Intracellular multiplication and human macrophage-killing J5285_16180 PF14331 ImcF-related N-terminal domain J5285_16180 PF06744 Type VI secretion protein IcmF C-terminal J5285_16190 PF00069 Protein kinase domain J5285_16195 PF02563 Polysaccharide biosynthesis/export protein J5285_16200 PF13188 PAS domain J5285_16200 PF00990 Diguanylate cyclase, GGDEF domain J5285_16200 PF03707 Bacterial signalling protein N terminal repeat J5285_16200 PF00563 EAL domain J5285_16210 PF03746 LamB/YcsF family J5285_16215 PF02682 Carboxyltransferase domain, subdomain C and D J5285_16220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_16220 PF00364 Biotin-requiring enzyme J5285_16220 PF00289 Biotin carboxylase, N-terminal domain J5285_16220 PF02785 Biotin carboxylase C-terminal domain J5285_16225 PF00005 ABC transporter J5285_16225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_16230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_16235 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16240 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_16240 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_16255 PF00529 HlyD membrane-fusion protein of T1SS J5285_16260 PF00005 ABC transporter J5285_16260 PF00664 ABC transporter transmembrane region J5285_16265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_16265 PF00005 ABC transporter J5285_16270 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_16270 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16275 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_16285 PF08220 DeoR-like helix-turn-helix domain J5285_16285 PF00455 DeoR C terminal sensor domain J5285_16290 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J5285_16290 PF01266 FAD dependent oxidoreductase J5285_16295 PF08402 TOBE domain J5285_16295 PF00005 ABC transporter J5285_16300 PF00005 ABC transporter J5285_16305 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16310 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16325 PF00296 Luciferase-like monooxygenase J5285_16330 PF00571 CBS domain J5285_16330 PF00005 ABC transporter J5285_16335 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16345 PF01116 Fructose-bisphosphate aldolase class-II J5285_16350 PF00578 AhpC/TSA family J5285_16350 PF10417 C-terminal domain of 1-Cys peroxiredoxin J5285_16355 PF12848 ABC transporter J5285_16355 PF00005 ABC transporter J5285_16360 PF00990 Diguanylate cyclase, GGDEF domain J5285_16370 PF00005 ABC transporter J5285_16375 PF01032 FecCD transport family J5285_16380 PF01497 Periplasmic binding protein J5285_16405 PF00925 GTP cyclohydrolase II J5285_16410 PF00107 Zinc-binding dehydrogenase J5285_16410 PF08240 Alcohol dehydrogenase GroES-like domain J5285_16420 PF00534 Glycosyl transferases group 1 J5285_16420 PF13439 Glycosyltransferase Family 4 J5285_16430 PF01872 RibD C-terminal domain J5285_16440 PF13454 FAD-NAD(P)-binding J5285_16460 PF12704 MacB-like periplasmic core domain J5285_16460 PF02687 FtsX-like permease family J5285_16465 PF00005 ABC transporter J5285_16490 PF00072 Response regulator receiver domain J5285_16490 PF00196 Bacterial regulatory proteins, luxR family J5285_16505 PF00664 ABC transporter transmembrane region J5285_16505 PF00005 ABC transporter J5285_16510 PF00529 HlyD membrane-fusion protein of T1SS J5285_16520 PF13532 2OG-Fe(II) oxygenase superfamily J5285_16535 PF00920 Dehydratase family J5285_16540 PF13407 Periplasmic binding protein domain J5285_16545 PF00005 ABC transporter J5285_16550 PF02653 Branched-chain amino acid transport system / permease component J5285_16555 PF02653 Branched-chain amino acid transport system / permease component J5285_16560 PF00392 Bacterial regulatory proteins, gntR family J5285_16560 PF07729 FCD domain J5285_16565 PF14579 Helix-hairpin-helix motif J5285_16565 PF01336 OB-fold nucleic acid binding domain J5285_16565 PF02811 PHP domain J5285_16565 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5285_16565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5285_16585 PF02563 Polysaccharide biosynthesis/export protein J5285_16590 PF02397 Bacterial sugar transferase J5285_16595 PF01965 DJ-1/PfpI family J5285_16605 PF10397 Adenylosuccinate lyase C-terminus J5285_16605 PF00206 Lyase J5285_16610 PF00775 Dioxygenase J5285_16615 PF00775 Dioxygenase J5285_16615 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J5285_16620 PF02627 Carboxymuconolactone decarboxylase family J5285_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_16630 PF03466 LysR substrate binding domain J5285_16635 PF01494 FAD binding domain J5285_16645 PF01614 Bacterial transcriptional regulator J5285_16645 PF09339 IclR helix-turn-helix domain J5285_16650 PF01144 Coenzyme A transferase J5285_16655 PF01144 Coenzyme A transferase J5285_16660 PF02803 Thiolase, C-terminal domain J5285_16660 PF00108 Thiolase, N-terminal domain J5285_16675 PF08448 PAS fold J5285_16675 PF08447 PAS fold J5285_16675 PF00563 EAL domain J5285_16675 PF00990 Diguanylate cyclase, GGDEF domain J5285_16680 PF13458 Periplasmic binding protein J5285_16695 PF00005 ABC transporter J5285_16695 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_16700 PF00005 ABC transporter J5285_16705 PF01571 Aminomethyltransferase folate-binding domain J5285_16710 PF07729 FCD domain J5285_16710 PF00392 Bacterial regulatory proteins, gntR family J5285_16715 PF04303 PrpF protein J5285_16720 PF03737 Aldolase/RraA J5285_16725 PF02585 GlcNAc-PI de-N-acetylase J5285_16730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_16740 PF00005 ABC transporter J5285_16745 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_16745 PF00005 ABC transporter J5285_16760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_16760 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_16760 PF12806 Acetyl-CoA dehydrogenase C-terminal like J5285_16760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_16765 PF00106 short chain dehydrogenase J5285_16770 PF00550 Phosphopantetheine attachment site J5285_16770 PF00501 AMP-binding enzyme J5285_16770 PF07993 Male sterility protein J5285_16775 PF00378 Enoyl-CoA hydratase/isomerase J5285_16790 PF01261 Xylose isomerase-like TIM barrel J5285_16790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_16800 PF00480 ROK family J5285_16805 PF01979 Amidohydrolase family J5285_16810 PF01380 SIS domain J5285_16815 PF00392 Bacterial regulatory proteins, gntR family J5285_16815 PF07702 UTRA domain J5285_16825 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16830 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16835 PF01547 Bacterial extracellular solute-binding protein J5285_16840 PF17912 MalK OB fold domain J5285_16840 PF00005 ABC transporter J5285_16845 PF07171 MlrC C-terminus J5285_16845 PF07364 Metallopeptidase family M81 J5285_16855 PF01042 Endoribonuclease L-PSP J5285_16860 PF01418 Helix-turn-helix domain, rpiR family J5285_16860 PF01380 SIS domain J5285_16870 PF00728 Glycosyl hydrolase family 20, catalytic domain J5285_16870 PF02838 Glycosyl hydrolase family 20, domain 2 J5285_16885 PF03932 CutC family J5285_16890 PF00817 impB/mucB/samB family J5285_16890 PF11799 impB/mucB/samB family C-terminal domain J5285_16910 PF00563 EAL domain J5285_16910 PF00990 Diguanylate cyclase, GGDEF domain J5285_16910 PF01590 GAF domain J5285_16910 PF00360 Phytochrome region J5285_16920 PF00581 Rhodanese-like domain J5285_16925 PF00296 Luciferase-like monooxygenase J5285_16940 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_16945 PF00005 ABC transporter J5285_16955 PF01546 Peptidase family M20/M25/M40 J5285_16955 PF07687 Peptidase dimerisation domain J5285_16960 PF00296 Luciferase-like monooxygenase J5285_16965 PF00296 Luciferase-like monooxygenase J5285_16975 PF03786 D-mannonate dehydratase (UxuA) J5285_16985 PF00005 ABC transporter J5285_16985 PF17912 MalK OB fold domain J5285_16985 PF03459 TOBE domain J5285_16990 PF00528 Binding-protein-dependent transport system inner membrane component J5285_16995 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17000 PF01547 Bacterial extracellular solute-binding protein J5285_17005 PF01263 Aldose 1-epimerase J5285_17030 PF00296 Luciferase-like monooxygenase J5285_17045 PF00005 ABC transporter J5285_17050 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17055 PF09084 NMT1/THI5 like J5285_17060 PF03180 NLPA lipoprotein J5285_17065 PF09383 NIL domain J5285_17065 PF00005 ABC transporter J5285_17070 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17080 PF00294 pfkB family carbohydrate kinase J5285_17085 PF01418 Helix-turn-helix domain, rpiR family J5285_17085 PF01380 SIS domain J5285_17090 PF02653 Branched-chain amino acid transport system / permease component J5285_17095 PF00005 ABC transporter J5285_17100 PF13407 Periplasmic binding protein domain J5285_17110 PF00294 pfkB family carbohydrate kinase J5285_17115 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17120 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17130 PF00005 ABC transporter J5285_17130 PF17912 MalK OB fold domain J5285_17130 PF03459 TOBE domain J5285_17140 PF01425 Amidase J5285_17150 PF13407 Periplasmic binding protein domain J5285_17160 PF02733 Dak1 domain J5285_17165 PF02734 DAK2 domain J5285_17170 PF02733 Dak1 domain J5285_17175 PF02734 DAK2 domain J5285_17190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_17195 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17200 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_17205 PF00005 ABC transporter J5285_17210 PF00005 ABC transporter J5285_17210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_17215 PF00248 Aldo/keto reductase family J5285_17225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_17225 PF03466 LysR substrate binding domain J5285_17230 PF00296 Luciferase-like monooxygenase J5285_17245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_17250 PF01546 Peptidase family M20/M25/M40 J5285_17250 PF07687 Peptidase dimerisation domain J5285_17255 PF00296 Luciferase-like monooxygenase J5285_17260 PF05368 NmrA-like family J5285_17270 PF00881 Nitroreductase family J5285_17275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_17285 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5285_17285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_17290 PF00296 Luciferase-like monooxygenase J5285_17295 PF00296 Luciferase-like monooxygenase J5285_17300 PF00005 ABC transporter J5285_17305 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17310 PF09084 NMT1/THI5 like J5285_17320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_17325 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17330 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17330 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_17335 PF00005 ABC transporter J5285_17335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_17340 PF00005 ABC transporter J5285_17340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_17350 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17355 PF00005 ABC transporter J5285_17360 PF00296 Luciferase-like monooxygenase J5285_17365 PF07690 Major Facilitator Superfamily J5285_17370 PF00248 Aldo/keto reductase family J5285_17375 PF03466 LysR substrate binding domain J5285_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_17425 PF01168 Alanine racemase, N-terminal domain J5285_17425 PF14031 Putative serine dehydratase domain J5285_17435 PF01547 Bacterial extracellular solute-binding protein J5285_17440 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17445 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17450 PF16875 Glycosyl hydrolase family 36 N-terminal domain J5285_17450 PF16874 Glycosyl hydrolase family 36 C-terminal domain J5285_17455 PF17912 MalK OB fold domain J5285_17455 PF00005 ABC transporter J5285_17460 PF08533 Beta-galactosidase C-terminal domain J5285_17460 PF02449 Beta-galactosidase J5285_17460 PF08532 Beta-galactosidase trimerisation domain J5285_17465 PF02627 Carboxymuconolactone decarboxylase family J5285_17470 PF13411 MerR HTH family regulatory protein J5285_17480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5285_17480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5285_17485 PF00106 short chain dehydrogenase J5285_17490 PF02653 Branched-chain amino acid transport system / permease component J5285_17495 PF00005 ABC transporter J5285_17500 PF13407 Periplasmic binding protein domain J5285_17505 PF06445 GyrI-like small molecule binding domain J5285_17505 PF12833 Helix-turn-helix domain J5285_17515 PF00107 Zinc-binding dehydrogenase J5285_17515 PF08240 Alcohol dehydrogenase GroES-like domain J5285_17520 PF03466 LysR substrate binding domain J5285_17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_17525 PF07859 alpha/beta hydrolase fold J5285_17530 PF13533 Biotin-lipoyl like J5285_17535 PF00873 AcrB/AcrD/AcrF family J5285_17540 PF11941 Domain of unknown function (DUF3459) J5285_17540 PF00128 Alpha amylase, catalytic domain J5285_17540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J5285_17545 PF00128 Alpha amylase, catalytic domain J5285_17550 PF00999 Sodium/hydrogen exchanger family J5285_17555 PF07690 Major Facilitator Superfamily J5285_17570 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J5285_17570 PF00722 Glycosyl hydrolases family 16 J5285_17575 PF17151 Periplasmic sensor domain J5285_17575 PF00990 Diguanylate cyclase, GGDEF domain J5285_17580 PF07883 Cupin domain J5285_17580 PF05899 Protein of unknown function (DUF861) J5285_17590 PF00990 Diguanylate cyclase, GGDEF domain J5285_17590 PF03707 Bacterial signalling protein N terminal repeat J5285_17590 PF13188 PAS domain J5285_17590 PF00563 EAL domain J5285_17595 PF00294 pfkB family carbohydrate kinase J5285_17600 PF00005 ABC transporter J5285_17600 PF17912 MalK OB fold domain J5285_17600 PF03459 TOBE domain J5285_17605 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17610 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17620 PF00392 Bacterial regulatory proteins, gntR family J5285_17620 PF07729 FCD domain J5285_17625 PF00701 Dihydrodipicolinate synthetase family J5285_17630 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J5285_17630 PF01580 FtsK/SpoIIIE family J5285_17630 PF17854 FtsK alpha domain J5285_17630 PF09397 Ftsk gamma domain J5285_17635 PF03030 Inorganic H+ pyrophosphatase J5285_17640 PF07690 Major Facilitator Superfamily J5285_17645 PF01029 NusB family J5285_17650 PF00885 6,7-dimethyl-8-ribityllumazine synthase J5285_17655 PF01810 LysE type translocator J5285_17660 PF00677 Lumazine binding domain J5285_17665 PF01872 RibD C-terminal domain J5285_17665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J5285_17670 PF03477 ATP cone domain J5285_17675 PF00464 Serine hydroxymethyltransferase J5285_17695 PF00490 Delta-aminolevulinic acid dehydratase J5285_17705 PF04376 Arginine-tRNA-protein transferase, N terminus J5285_17705 PF04377 Arginine-tRNA-protein transferase, C terminus J5285_17720 PF00521 DNA gyrase/topoisomerase IV, subunit A J5285_17720 PF03989 DNA gyrase C-terminal domain, beta-propeller J5285_17730 PF01740 STAS domain J5285_17730 PF00916 Sulfate permease family J5285_17740 PF01336 OB-fold nucleic acid binding domain J5285_17740 PF00152 tRNA synthetases class II (D, K and N) J5285_17740 PF02938 GAD domain J5285_17745 PF01612 3'-5' exonuclease J5285_17745 PF00570 HRDC domain J5285_17750 PF00211 Adenylate and Guanylate cyclase catalytic domain J5285_17760 PF02308 MgtC family J5285_17765 PF02541 Ppx/GppA phosphatase family J5285_17770 PF02503 Polyphosphate kinase middle domain J5285_17770 PF17941 Polyphosphate kinase C-terminal domain 1 J5285_17770 PF13089 Polyphosphate kinase N-terminal domain J5285_17770 PF13090 Polyphosphate kinase C-terminal domain 2 J5285_17780 PF01594 AI-2E family transporter J5285_17785 PF02769 AIR synthase related protein, C-terminal domain J5285_17785 PF00586 AIR synthase related protein, N-terminal domain J5285_17790 PF00551 Formyl transferase J5285_17805 PF00293 NUDIX domain J5285_17810 PF01568 Molydopterin dinucleotide binding domain J5285_17810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J5285_17810 PF00384 Molybdopterin oxidoreductase J5285_17815 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J5285_17825 PF00445 Ribonuclease T2 family J5285_17830 PF00043 Glutathione S-transferase, C-terminal domain J5285_17830 PF13417 Glutathione S-transferase, N-terminal domain J5285_17840 PF13505 Outer membrane protein beta-barrel domain J5285_17850 PF08459 UvrC Helix-hairpin-helix N-terminal J5285_17850 PF01541 GIY-YIG catalytic domain J5285_17850 PF02151 UvrB/uvrC motif J5285_17855 PF01066 CDP-alcohol phosphatidyltransferase J5285_17865 PF02391 MoaE protein J5285_17875 PF00403 Heavy-metal-associated domain J5285_17880 PF00892 EamA-like transporter family J5285_17885 PF02423 Ornithine cyclodeaminase/mu-crystallin family J5285_17890 PF00491 Arginase family J5285_17905 PF01261 Xylose isomerase-like TIM barrel J5285_17910 PF17912 MalK OB fold domain J5285_17910 PF03459 TOBE domain J5285_17910 PF00005 ABC transporter J5285_17920 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17925 PF00528 Binding-protein-dependent transport system inner membrane component J5285_17935 PF00480 ROK family J5285_17940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J5285_17940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J5285_17945 PF00300 Histidine phosphatase superfamily (branch 1) J5285_17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_17950 PF00512 His Kinase A (phospho-acceptor) domain J5285_17950 PF07689 KaiB domain J5285_17955 PF00486 Transcriptional regulatory protein, C terminal J5285_17955 PF00072 Response regulator receiver domain J5285_17960 PF05860 haemagglutination activity domain J5285_17980 PF01425 Amidase J5285_17985 PF01179 Copper amine oxidase, enzyme domain J5285_17985 PF07833 Copper amine oxidase N-terminal domain J5285_17985 PF02727 Copper amine oxidase, N2 domain J5285_17985 PF02728 Copper amine oxidase, N3 domain J5285_17990 PF00171 Aldehyde dehydrogenase family J5285_17995 PF12833 Helix-turn-helix domain J5285_18000 PF00378 Enoyl-CoA hydratase/isomerase J5285_18000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5285_18000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5285_18005 PF00005 ABC transporter J5285_18010 PF00005 ABC transporter J5285_18010 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_18015 PF11862 Domain of unknown function (DUF3382) J5285_18015 PF02653 Branched-chain amino acid transport system / permease component J5285_18020 PF02653 Branched-chain amino acid transport system / permease component J5285_18025 PF13458 Periplasmic binding protein J5285_18030 PF00378 Enoyl-CoA hydratase/isomerase J5285_18035 PF03061 Thioesterase superfamily J5285_18040 PF14535 AMP-binding enzyme C-terminal domain J5285_18040 PF00501 AMP-binding enzyme J5285_18045 PF13977 BetI-type transcriptional repressor, C-terminal J5285_18045 PF00440 Bacterial regulatory proteins, tetR family J5285_18050 PF00132 Bacterial transferase hexapeptide (six repeats) J5285_18055 PF00171 Aldehyde dehydrogenase family J5285_18055 PF01575 MaoC like domain J5285_18060 PF00111 2Fe-2S iron-sulfur cluster binding domain J5285_18060 PF00970 Oxidoreductase FAD-binding domain J5285_18060 PF00175 Oxidoreductase NAD-binding domain J5285_18065 PF01883 Iron-sulfur cluster assembly protein J5285_18070 PF05138 Phenylacetic acid catabolic protein J5285_18075 PF06243 Phenylacetic acid degradation B J5285_18080 PF05138 Phenylacetic acid catabolic protein J5285_18085 PF00108 Thiolase, N-terminal domain J5285_18085 PF02803 Thiolase, C-terminal domain J5285_18095 PF01544 CorA-like Mg2+ transporter protein J5285_18110 PF00313 'Cold-shock' DNA-binding domain J5285_18115 PF01165 Ribosomal protein S21 J5285_18125 PF13426 PAS domain J5285_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_18125 PF00072 Response regulator receiver domain J5285_18130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_18130 PF00512 His Kinase A (phospho-acceptor) domain J5285_18130 PF01590 GAF domain J5285_18130 PF00360 Phytochrome region J5285_18130 PF08446 PAS fold J5285_18150 PF03928 Haem-degrading J5285_18155 PF00669 Bacterial flagellin N-terminal helical region J5285_18155 PF00700 Bacterial flagellin C-terminal helical region J5285_18170 PF00141 Peroxidase J5285_18175 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_18180 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18185 PF00005 ABC transporter J5285_18195 PF00529 HlyD membrane-fusion protein of T1SS J5285_18195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_18200 PF00873 AcrB/AcrD/AcrF family J5285_18205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J5285_18220 PF00830 Ribosomal L28 family J5285_18225 PF02592 Putative vitamin uptake transporter J5285_18230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J5285_18235 PF00884 Sulfatase J5285_18235 PF12411 Choline sulfatase enzyme C terminal J5285_18245 PF04752 ChaC-like protein J5285_18255 PF04198 Putative sugar-binding domain J5285_18260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5285_18260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5285_18265 PF02779 Transketolase, pyrimidine binding domain J5285_18265 PF02780 Transketolase, C-terminal domain J5285_18270 PF00456 Transketolase, thiamine diphosphate binding domain J5285_18275 PF02653 Branched-chain amino acid transport system / permease component J5285_18280 PF13407 Periplasmic binding protein domain J5285_18285 PF00005 ABC transporter J5285_18300 PF16123 Hydroxyacylglutathione hydrolase C-terminus J5285_18300 PF00753 Metallo-beta-lactamase superfamily J5285_18305 PF01209 ubiE/COQ5 methyltransferase family J5285_18310 PF00155 Aminotransferase class I and II J5285_18315 PF02153 Prephenate dehydrogenase J5285_18320 PF02492 CobW/HypB/UreG, nucleotide-binding domain J5285_18320 PF07683 Cobalamin synthesis protein cobW C-terminal domain J5285_18325 PF07943 Penicillin-binding protein 5, C-terminal domain J5285_18325 PF00768 D-alanyl-D-alanine carboxypeptidase J5285_18330 PF07687 Peptidase dimerisation domain J5285_18330 PF01546 Peptidase family M20/M25/M40 J5285_18340 PF03576 Peptidase family S58 J5285_18345 PF01063 Amino-transferase class IV J5285_18355 PF01244 Membrane dipeptidase (Peptidase family M19) J5285_18360 PF03706 Lysylphosphatidylglycerol synthase TM region J5285_18360 PF09924 Uncharacterised conserved protein (DUF2156) J5285_18370 PF01321 Creatinase/Prolidase N-terminal domain J5285_18370 PF00557 Metallopeptidase family M24 J5285_18380 PF00005 ABC transporter J5285_18380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_18385 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18385 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_18390 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_18405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J5285_18410 PF00701 Dihydrodipicolinate synthetase family J5285_18415 PF00465 Iron-containing alcohol dehydrogenase J5285_18420 PF07005 Sugar-binding N-terminal domain J5285_18420 PF17042 Nucleotide-binding C-terminal domain J5285_18425 PF07729 FCD domain J5285_18425 PF00392 Bacterial regulatory proteins, gntR family J5285_18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_18430 PF03466 LysR substrate binding domain J5285_18435 PF02110 Hydroxyethylthiazole kinase family J5285_18440 PF02581 Thiamine monophosphate synthase J5285_18445 PF08543 Phosphomethylpyrimidine kinase J5285_18450 PF01037 Lrp/AsnC ligand binding domain J5285_18455 PF00842 Alanine racemase, C-terminal domain J5285_18455 PF01168 Alanine racemase, N-terminal domain J5285_18460 PF01266 FAD dependent oxidoreductase J5285_18470 PF02954 Bacterial regulatory protein, Fis family J5285_18470 PF00072 Response regulator receiver domain J5285_18470 PF00158 Sigma-54 interaction domain J5285_18475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_18475 PF00512 His Kinase A (phospho-acceptor) domain J5285_18480 PF00375 Sodium:dicarboxylate symporter family J5285_18485 PF00892 EamA-like transporter family J5285_18495 PF01039 Carboxyl transferase domain J5285_18500 PF18140 Propionyl-coenzyme A carboxylase BT domain J5285_18500 PF02785 Biotin carboxylase C-terminal domain J5285_18500 PF00289 Biotin carboxylase, N-terminal domain J5285_18500 PF00364 Biotin-requiring enzyme J5285_18500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_18505 PF01380 SIS domain J5285_18505 PF01418 Helix-turn-helix domain, rpiR family J5285_18510 PF00294 pfkB family carbohydrate kinase J5285_18515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5285_18515 PF00205 Thiamine pyrophosphate enzyme, central domain J5285_18515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5285_18520 PF01261 Xylose isomerase-like TIM barrel J5285_18525 PF04962 KduI/IolB family J5285_18530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_18530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_18540 PF01609 Transposase DDE domain J5285_18545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_18545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_18550 PF00005 ABC transporter J5285_18555 PF02653 Branched-chain amino acid transport system / permease component J5285_18590 PF00034 Cytochrome c J5285_18590 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J5285_18590 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J5285_18595 PF00115 Cytochrome C and Quinol oxidase polypeptide I J5285_18625 PF08281 Sigma-70, region 4 J5285_18625 PF04542 Sigma-70 region 2 J5285_18630 PF01209 ubiE/COQ5 methyltransferase family J5285_18645 PF03358 NADPH-dependent FMN reductase J5285_18645 PF01566 Natural resistance-associated macrophage protein J5285_18650 PF00384 Molybdopterin oxidoreductase J5285_18655 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18660 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18675 PF02735 Ku70/Ku80 beta-barrel domain J5285_18680 PF04679 ATP dependent DNA ligase C terminal region J5285_18680 PF01068 ATP dependent DNA ligase domain J5285_18680 PF13298 DNA polymerase Ligase (LigD) J5285_18685 PF02735 Ku70/Ku80 beta-barrel domain J5285_18690 PF00156 Phosphoribosyl transferase domain J5285_18695 PF07687 Peptidase dimerisation domain J5285_18695 PF01546 Peptidase family M20/M25/M40 J5285_18700 PF13382 Adenine deaminase C-terminal domain J5285_18700 PF01979 Amidohydrolase family J5285_18710 PF00005 ABC transporter J5285_18710 PF08402 TOBE domain J5285_18720 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18730 PF00356 Bacterial regulatory proteins, lacI family J5285_18735 PF02803 Thiolase, C-terminal domain J5285_18735 PF00108 Thiolase, N-terminal domain J5285_18740 PF01613 Flavin reductase like domain J5285_18745 PF02082 Transcriptional regulator J5285_18755 PF01270 Glycosyl hydrolases family 8 J5285_18765 PF00535 Glycosyl transferase family 2 J5285_18765 PF07238 PilZ domain J5285_18765 PF03552 Cellulose synthase J5285_18780 PF00155 Aminotransferase class I and II J5285_18790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J5285_18790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J5285_18795 PF13419 Haloacid dehalogenase-like hydrolase J5285_18800 PF08125 Mannitol dehydrogenase C-terminal domain J5285_18800 PF01232 Mannitol dehydrogenase Rossmann domain J5285_18805 PF08402 TOBE domain J5285_18805 PF00005 ABC transporter J5285_18810 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18815 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18825 PF00325 Bacterial regulatory proteins, crp family J5285_18825 PF04198 Putative sugar-binding domain J5285_18830 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_18830 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18835 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_18845 PF03466 LysR substrate binding domain J5285_18850 PF01609 Transposase DDE domain J5285_18855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_18855 PF00005 ABC transporter J5285_18860 PF00005 ABC transporter J5285_18860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_18865 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_18865 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18870 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_18880 PF01244 Membrane dipeptidase (Peptidase family M19) J5285_18885 PF03466 LysR substrate binding domain J5285_18885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_18890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_18890 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_18890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_18895 PF00171 Aldehyde dehydrogenase family J5285_18900 PF00135 Carboxylesterase family J5285_18905 PF00083 Sugar (and other) transporter J5285_18905 PF08946 Osmosensory transporter coiled coil J5285_18925 PF00085 Thioredoxin J5285_18935 PF03966 Trm112p-like protein J5285_18940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_18955 PF13426 PAS domain J5285_18955 PF00072 Response regulator receiver domain J5285_18955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_18970 PF03466 LysR substrate binding domain J5285_18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_18975 PF07729 FCD domain J5285_18975 PF00392 Bacterial regulatory proteins, gntR family J5285_18985 PF00005 ABC transporter J5285_18990 PF00528 Binding-protein-dependent transport system inner membrane component J5285_18995 PF00920 Dehydratase family J5285_19000 PF03737 Aldolase/RraA J5285_19005 PF00155 Aminotransferase class I and II J5285_19005 PF00392 Bacterial regulatory proteins, gntR family J5285_19020 PF00528 Binding-protein-dependent transport system inner membrane component J5285_19025 PF00005 ABC transporter J5285_19030 PF01546 Peptidase family M20/M25/M40 J5285_19030 PF07687 Peptidase dimerisation domain J5285_19035 PF17962 Bacterial macroglobulin domain 6 J5285_19035 PF00207 Alpha-2-macroglobulin family J5285_19035 PF07703 Alpha-2-macroglobulin bait region domain J5285_19035 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J5285_19035 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J5285_19035 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J5285_19035 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J5285_19035 PF01835 MG2 domain J5285_19035 PF07678 A-macroglobulin TED domain J5285_19040 PF00905 Penicillin binding protein transpeptidase domain J5285_19040 PF00912 Transglycosylase J5285_19040 PF06832 Penicillin-Binding Protein C-terminus Family J5285_19045 PF03466 LysR substrate binding domain J5285_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_19065 PF01078 Magnesium chelatase, subunit ChlI J5285_19065 PF13335 Magnesium chelatase, subunit ChlI C-terminal J5285_19070 PF01048 Phosphorylase superfamily J5285_19120 PF03733 Inner membrane component domain J5285_19135 PF07508 Recombinase J5285_19135 PF00239 Resolvase, N terminal domain J5285_19135 PF13408 Recombinase zinc beta ribbon domain J5285_19140 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J5285_19140 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J5285_19145 PF01126 Heme oxygenase J5285_19150 PF11800 Replication protein C C-terminal region J5285_19150 PF03428 Replication protein C N-terminal domain J5285_19155 PF07506 RepB plasmid partitioning protein J5285_19155 PF02195 ParB-like nuclease domain J5285_19160 PF13614 AAA domain J5285_19170 PF00202 Aminotransferase class-III J5285_19185 PF00873 AcrB/AcrD/AcrF family J5285_19190 PF13533 Biotin-lipoyl like J5285_19195 PF01042 Endoribonuclease L-PSP J5285_19200 PF00440 Bacterial regulatory proteins, tetR family J5285_19210 PF12146 Serine aminopeptidase, S33 J5285_19215 PF00707 Translation initiation factor IF-3, C-terminal domain J5285_19215 PF05198 Translation initiation factor IF-3, N-terminal domain J5285_19220 PF01632 Ribosomal protein L35 J5285_19225 PF00453 Ribosomal protein L20 J5285_19235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J5285_19235 PF01409 tRNA synthetases class II core domain (F) J5285_19250 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J5285_19250 PF03147 Ferredoxin-fold anticodon binding domain J5285_19250 PF03484 tRNA synthetase B5 domain J5285_19250 PF03483 B3/4 domain J5285_19250 PF01588 Putative tRNA binding domain J5285_19255 PF03401 Tripartite tricarboxylate transporter family receptor J5285_19265 PF00296 Luciferase-like monooxygenase J5285_19270 PF00857 Isochorismatase family J5285_19275 PF01042 Endoribonuclease L-PSP J5285_19280 PF00561 alpha/beta hydrolase fold J5285_19285 PF01613 Flavin reductase like domain J5285_19290 PF13378 Enolase C-terminal domain-like J5285_19290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_19305 PF07729 FCD domain J5285_19305 PF00392 Bacterial regulatory proteins, gntR family J5285_19310 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_19320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5285_19325 PF08240 Alcohol dehydrogenase GroES-like domain J5285_19325 PF00107 Zinc-binding dehydrogenase J5285_19330 PF03786 D-mannonate dehydratase (UxuA) J5285_19335 PF08125 Mannitol dehydrogenase C-terminal domain J5285_19335 PF01232 Mannitol dehydrogenase Rossmann domain J5285_19340 PF00083 Sugar (and other) transporter J5285_19345 PF01118 Semialdehyde dehydrogenase, NAD binding domain J5285_19345 PF02774 Semialdehyde dehydrogenase, dimerisation domain J5285_19355 PF00484 Carbonic anhydrase J5285_19370 PF02224 Cytidylate kinase J5285_19375 PF00575 S1 RNA binding domain J5285_19385 PF00476 DNA polymerase family A J5285_19385 PF01612 3'-5' exonuclease J5285_19395 PF00106 short chain dehydrogenase J5285_19400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_19400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_19405 PF00384 Molybdopterin oxidoreductase J5285_19405 PF01568 Molydopterin dinucleotide binding domain J5285_19405 PF04324 BFD-like [2Fe-2S] binding domain J5285_19405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J5285_19415 PF04324 BFD-like [2Fe-2S] binding domain J5285_19415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J5285_19415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J5285_19415 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_19415 PF18267 Rubredoxin NAD+ reductase C-terminal domain J5285_19420 PF00005 ABC transporter J5285_19425 PF00528 Binding-protein-dependent transport system inner membrane component J5285_19440 PF03861 ANTAR domain J5285_19440 PF08376 Nitrate and nitrite sensing J5285_19445 PF00392 Bacterial regulatory proteins, gntR family J5285_19445 PF07729 FCD domain J5285_19450 PF10415 Fumarase C C-terminus J5285_19450 PF00206 Lyase J5285_19455 PF00324 Amino acid permease J5285_19460 PF00710 Asparaginase, N-terminal J5285_19460 PF17763 Glutaminase/Asparaginase C-terminal domain J5285_19465 PF03471 Transporter associated domain J5285_19465 PF03741 Integral membrane protein TerC family J5285_19470 PF01011 PQQ enzyme repeat J5285_19480 PF01032 FecCD transport family J5285_19485 PF00005 ABC transporter J5285_19495 PF16363 GDP-mannose 4,6 dehydratase J5285_19500 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J5285_19500 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J5285_19500 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J5285_19505 PF00672 HAMP domain J5285_19505 PF00211 Adenylate and Guanylate cyclase catalytic domain J5285_19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_19510 PF03466 LysR substrate binding domain J5285_19515 PF00171 Aldehyde dehydrogenase family J5285_19520 PF03466 LysR substrate binding domain J5285_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_19525 PF00491 Arginase family J5285_19535 PF00005 ABC transporter J5285_19535 PF08402 TOBE domain J5285_19540 PF00528 Binding-protein-dependent transport system inner membrane component J5285_19550 PF00795 Carbon-nitrogen hydrolase J5285_19555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J5285_19555 PF14850 DNA-binding domain of Proline dehydrogenase J5285_19555 PF01619 Proline dehydrogenase J5285_19555 PF00171 Aldehyde dehydrogenase family J5285_19560 PF01037 Lrp/AsnC ligand binding domain J5285_19565 PF04542 Sigma-70 region 2 J5285_19565 PF08281 Sigma-70, region 4 J5285_19575 PF00072 Response regulator receiver domain J5285_19580 PF13426 PAS domain J5285_19580 PF07536 HWE histidine kinase J5285_19580 PF08447 PAS fold J5285_19585 PF07536 HWE histidine kinase J5285_19585 PF13426 PAS domain J5285_19595 PF16363 GDP-mannose 4,6 dehydratase J5285_19610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J5285_19615 PF16653 Saccharopine dehydrogenase C-terminal domain J5285_19615 PF03435 Saccharopine dehydrogenase NADP binding domain J5285_19635 PF00528 Binding-protein-dependent transport system inner membrane component J5285_19640 PF00528 Binding-protein-dependent transport system inner membrane component J5285_19645 PF00005 ABC transporter J5285_19650 PF01464 Transglycosylase SLT domain J5285_19650 PF10145 Phage-related minor tail protein J5285_19650 PF01551 Peptidase family M23 J5285_19685 PF00625 Guanylate kinase J5285_19695 PF03401 Tripartite tricarboxylate transporter family receptor J5285_19700 PF07729 FCD domain J5285_19700 PF00392 Bacterial regulatory proteins, gntR family J5285_19710 PF01970 Tripartite tricarboxylate transporter TctA family J5285_19725 PF07690 Major Facilitator Superfamily J5285_19730 PF13533 Biotin-lipoyl like J5285_19740 PF00561 alpha/beta hydrolase fold J5285_19760 PF00654 Voltage gated chloride channel J5285_19770 PF00440 Bacterial regulatory proteins, tetR family J5285_19770 PF13977 BetI-type transcriptional repressor, C-terminal J5285_19775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_19780 PF13533 Biotin-lipoyl like J5285_19785 PF00873 AcrB/AcrD/AcrF family J5285_19800 PF00248 Aldo/keto reductase family J5285_19805 PF00072 Response regulator receiver domain J5285_19805 PF12833 Helix-turn-helix domain J5285_19815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_19815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_19830 PF02601 Exonuclease VII, large subunit J5285_19830 PF13742 OB-fold nucleic acid binding domain J5285_19835 PF13378 Enolase C-terminal domain-like J5285_19835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_19840 PF01047 MarR family J5285_19845 PF00892 EamA-like transporter family J5285_19850 PF00285 Citrate synthase, C-terminal domain J5285_19855 PF00285 Citrate synthase, C-terminal domain J5285_19860 PF02073 Thermophilic metalloprotease (M29) J5285_19865 PF04073 Aminoacyl-tRNA editing domain J5285_19870 PF03960 ArsC family J5285_19890 PF00117 Glutamine amidotransferase class-I J5285_19890 PF00958 GMP synthase C terminal domain J5285_19905 PF03073 TspO/MBR family J5285_19930 PF01189 16S rRNA methyltransferase RsmB/F J5285_19930 PF01029 NusB family J5285_19935 PF03330 Lytic transglycolase J5285_19945 PF08331 Domain of unknown function (DUF1730) J5285_19950 PF13417 Glutathione S-transferase, N-terminal domain J5285_19950 PF00043 Glutathione S-transferase, C-terminal domain J5285_19965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J5285_19975 PF13649 Methyltransferase domain J5285_19980 PF02768 DNA polymerase III beta subunit, C-terminal domain J5285_19980 PF02767 DNA polymerase III beta subunit, central domain J5285_19980 PF00712 DNA polymerase III beta subunit, N-terminal domain J5285_19985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J5285_19990 PF02021 Uncharacterised protein family UPF0102 J5285_19995 PF13416 Bacterial extracellular solute-binding protein J5285_20000 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20005 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20010 PF00005 ABC transporter J5285_20025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_20025 PF00672 HAMP domain J5285_20035 PF12833 Helix-turn-helix domain J5285_20040 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_20050 PF00072 Response regulator receiver domain J5285_20055 PF00004 ATPase family associated with various cellular activities (AAA) J5285_20055 PF07724 AAA domain (Cdc48 subfamily) J5285_20055 PF17871 AAA lid domain J5285_20055 PF02861 Clp amino terminal domain, pathogenicity island component J5285_20055 PF10431 C-terminal, D2-small domain, of ClpB protein J5285_20060 PF00156 Phosphoribosyl transferase domain J5285_20070 PF00005 ABC transporter J5285_20095 PF06213 Cobalamin biosynthesis protein CobT J5285_20095 PF11775 Cobalamin biosynthesis protein CobT VWA domain J5285_20100 PF08406 CbbQ/NirQ/NorQ C-terminal J5285_20100 PF12556 Cobaltochelatase CobS subunit N terminal J5285_20100 PF07728 AAA domain (dynein-related subfamily) J5285_20105 PF00226 DnaJ domain J5285_20110 PF01722 BolA-like protein J5285_20115 PF01761 3-dehydroquinate synthase J5285_20120 PF01202 Shikimate kinase J5285_20130 PF00589 Phage integrase family J5285_20130 PF02899 Phage integrase, N-terminal SAM-like domain J5285_20135 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J5285_20160 PF00749 tRNA synthetases class I (E and Q), catalytic domain J5285_20170 PF00106 short chain dehydrogenase J5285_20180 PF01923 Cobalamin adenosyltransferase J5285_20185 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease J5285_20185 PF01694 Rhomboid family J5285_20190 PF01012 Electron transfer flavoprotein domain J5285_20195 PF00766 Electron transfer flavoprotein FAD-binding domain J5285_20195 PF01012 Electron transfer flavoprotein domain J5285_20200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J5285_20200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J5285_20205 PF00043 Glutathione S-transferase, C-terminal domain J5285_20205 PF13417 Glutathione S-transferase, N-terminal domain J5285_20210 PF08534 Redoxin J5285_20215 PF14698 Argininosuccinate lyase C-terminal J5285_20215 PF00206 Lyase J5285_20225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J5285_20225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J5285_20240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_20240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_20245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_20245 PF13807 G-rich domain on putative tyrosine kinase J5285_20245 PF02706 Chain length determinant protein J5285_20270 PF13439 Glycosyltransferase Family 4 J5285_20270 PF00534 Glycosyl transferases group 1 J5285_20275 PF13439 Glycosyltransferase Family 4 J5285_20275 PF00534 Glycosyl transferases group 1 J5285_20280 PF13439 Glycosyltransferase Family 4 J5285_20280 PF00534 Glycosyl transferases group 1 J5285_20290 PF01037 Lrp/AsnC ligand binding domain J5285_20295 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_20295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_20295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_20300 PF00676 Dehydrogenase E1 component J5285_20300 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal J5285_20305 PF02779 Transketolase, pyrimidine binding domain J5285_20305 PF02780 Transketolase, C-terminal domain J5285_20310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J5285_20310 PF00364 Biotin-requiring enzyme J5285_20310 PF02817 e3 binding domain J5285_20315 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_20315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J5285_20320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5285_20320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5285_20325 PF00005 ABC transporter J5285_20325 PF08402 TOBE domain J5285_20330 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20335 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20340 PF13416 Bacterial extracellular solute-binding protein J5285_20345 PF02810 SEC-C motif J5285_20345 PF07517 SecA DEAD-like domain J5285_20345 PF01043 SecA preprotein cross-linking domain J5285_20345 PF07516 SecA Wing and Scaffold domain J5285_20355 PF01960 ArgJ family J5285_20365 PF00293 NUDIX domain J5285_20380 PF08241 Methyltransferase domain J5285_20390 PF00462 Glutaredoxin J5285_20395 PF00795 Carbon-nitrogen hydrolase J5285_20405 PF08241 Methyltransferase domain J5285_20415 PF00271 Helicase conserved C-terminal domain J5285_20415 PF00270 DEAD/DEAH box helicase J5285_20420 PF00696 Amino acid kinase family J5285_20420 PF01842 ACT domain J5285_20420 PF13840 ACT domain J5285_20425 PF00391 PEP-utilising enzyme, mobile domain J5285_20425 PF01590 GAF domain J5285_20425 PF05524 PEP-utilising enzyme, N-terminal J5285_20425 PF02896 PEP-utilising enzyme, TIM barrel domain J5285_20430 PF00472 RF-1 domain J5285_20430 PF03462 PCRF domain J5285_20435 PF17827 PrmC N-terminal domain J5285_20435 PF05175 Methyltransferase small domain J5285_20445 PF02310 B12 binding domain J5285_20445 PF01642 Methylmalonyl-CoA mutase J5285_20460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J5285_20460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J5285_20475 PF01206 Sulfurtransferase TusA J5285_20475 PF00581 Rhodanese-like domain J5285_20485 PF13091 PLD-like domain J5285_20500 PF00034 Cytochrome c J5285_20505 PF02631 RecX family J5285_20520 PF14310 Fibronectin type III-like domain J5285_20520 PF00933 Glycosyl hydrolase family 3 N terminal domain J5285_20520 PF01915 Glycosyl hydrolase family 3 C-terminal domain J5285_20520 PF07691 PA14 domain J5285_20525 PF00211 Adenylate and Guanylate cyclase catalytic domain J5285_20540 PF13416 Bacterial extracellular solute-binding protein J5285_20545 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20550 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20555 PF00005 ABC transporter J5285_20555 PF17912 MalK OB fold domain J5285_20560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_20575 PF05209 Septum formation inhibitor MinC, N-terminal domain J5285_20575 PF03775 Septum formation inhibitor MinC, C-terminal domain J5285_20580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_20585 PF03776 Septum formation topological specificity factor MinE J5285_20590 PF07729 FCD domain J5285_20590 PF00392 Bacterial regulatory proteins, gntR family J5285_20595 PF00701 Dihydrodipicolinate synthetase family J5285_20600 PF00561 alpha/beta hydrolase fold J5285_20605 PF00005 ABC transporter J5285_20610 PF01032 FecCD transport family J5285_20615 PF01032 FecCD transport family J5285_20625 PF07715 TonB-dependent Receptor Plug Domain J5285_20625 PF00593 TonB dependent receptor J5285_20635 PF00672 HAMP domain J5285_20635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_20640 PF11972 HTH DNA binding domain J5285_20640 PF07756 Protein of unknown function (DUF1612) J5285_20645 PF00083 Sugar (and other) transporter J5285_20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_20650 PF00512 His Kinase A (phospho-acceptor) domain J5285_20655 PF00072 Response regulator receiver domain J5285_20655 PF00486 Transcriptional regulatory protein, C terminal J5285_20660 PF08019 Phosphoethanolamine transferase EptA/EptB J5285_20660 PF00884 Sulfatase J5285_20675 PF07995 Glucose / Sorbosone dehydrogenase J5285_20685 PF04445 Putative SAM-dependent methyltransferase J5285_20690 PF00849 RNA pseudouridylate synthase J5285_20695 PF01205 Uncharacterized protein family UPF0029 J5285_20700 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_20700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5285_20705 PF13426 PAS domain J5285_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_20705 PF00072 Response regulator receiver domain J5285_20710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_20715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_20715 PF13807 G-rich domain on putative tyrosine kinase J5285_20715 PF02706 Chain length determinant protein J5285_20720 PF00483 Nucleotidyl transferase J5285_20725 PF00535 Glycosyl transferase family 2 J5285_20730 PF00535 Glycosyl transferase family 2 J5285_20735 PF00535 Glycosyl transferase family 2 J5285_20745 PF00722 Glycosyl hydrolases family 16 J5285_20750 PF01757 Acyltransferase family J5285_20755 PF01943 Polysaccharide biosynthesis protein J5285_20760 PF00535 Glycosyl transferase family 2 J5285_20765 PF04230 Polysaccharide pyruvyl transferase J5285_20770 PF00535 Glycosyl transferase family 2 J5285_20775 PF11089 Exopolysaccharide production repressor J5285_20785 PF00356 Bacterial regulatory proteins, lacI family J5285_20790 PF00005 ABC transporter J5285_20795 PF02653 Branched-chain amino acid transport system / permease component J5285_20800 PF13407 Periplasmic binding protein domain J5285_20805 PF01266 FAD dependent oxidoreductase J5285_20810 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J5285_20815 PF01515 Phosphate acetyl/butaryl transferase J5285_20815 PF00390 Malic enzyme, N-terminal domain J5285_20815 PF03949 Malic enzyme, NAD binding domain J5285_20820 PF01050 Mannose-6-phosphate isomerase J5285_20820 PF00483 Nucleotidyl transferase J5285_20825 PF13614 AAA domain J5285_20830 PF01339 CheB methylesterase J5285_20830 PF00072 Response regulator receiver domain J5285_20835 PF01739 CheR methyltransferase, SAM binding domain J5285_20835 PF03705 CheR methyltransferase, all-alpha domain J5285_20840 PF01584 CheW-like domain J5285_20845 PF00672 HAMP domain J5285_20845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_20845 PF02203 Tar ligand binding domain homologue J5285_20850 PF00672 HAMP domain J5285_20850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_20850 PF02203 Tar ligand binding domain homologue J5285_20855 PF12729 Four helix bundle sensory module for signal transduction J5285_20855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_20855 PF00672 HAMP domain J5285_20860 PF00672 HAMP domain J5285_20860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_20860 PF02203 Tar ligand binding domain homologue J5285_20865 PF01584 CheW-like domain J5285_20870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_20870 PF01627 Hpt domain J5285_20870 PF09078 CheY binding J5285_20870 PF01584 CheW-like domain J5285_20870 PF02895 Signal transducing histidine kinase, homodimeric domain J5285_20875 PF00072 Response regulator receiver domain J5285_20885 PF00072 Response regulator receiver domain J5285_20890 PF01547 Bacterial extracellular solute-binding protein J5285_20895 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20900 PF00528 Binding-protein-dependent transport system inner membrane component J5285_20905 PF00005 ABC transporter J5285_20905 PF17912 MalK OB fold domain J5285_20915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_20915 PF10518 TAT (twin-arginine translocation) pathway signal sequence J5285_20925 PF06508 Queuosine biosynthesis protein QueC J5285_20930 PF01242 6-pyruvoyl tetrahydropterin synthase J5285_20935 PF04055 Radical SAM superfamily J5285_20950 PF02245 Methylpurine-DNA glycosylase (MPG) J5285_20965 PF03734 L,D-transpeptidase catalytic domain J5285_20965 PF17969 L,D-transpeptidase C-terminal domain J5285_20970 PF02954 Bacterial regulatory protein, Fis family J5285_20970 PF00158 Sigma-54 interaction domain J5285_20970 PF00072 Response regulator receiver domain J5285_20975 PF08769 Sporulation initiation factor Spo0A C terminal J5285_20975 PF00072 Response regulator receiver domain J5285_20980 PF01627 Hpt domain J5285_20980 PF00072 Response regulator receiver domain J5285_20980 PF18415 Histidine kinase receptor ArcB trans-membrane domain J5285_20980 PF00989 PAS fold J5285_20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_20980 PF00512 His Kinase A (phospho-acceptor) domain J5285_20985 PF06772 Bacterial low temperature requirement A protein (LtrA) J5285_21005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_21005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_21010 PF17938 Tetracyclin repressor-like, C-terminal domain J5285_21010 PF00440 Bacterial regulatory proteins, tetR family J5285_21020 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21025 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_21035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_21040 PF00005 ABC transporter J5285_21040 PF17912 MalK OB fold domain J5285_21040 PF03459 TOBE domain J5285_21045 PF01209 ubiE/COQ5 methyltransferase family J5285_21055 PF01032 FecCD transport family J5285_21060 PF00005 ABC transporter J5285_21065 PF13454 FAD-NAD(P)-binding J5285_21070 PF01323 DSBA-like thioredoxin domain J5285_21075 PF01244 Membrane dipeptidase (Peptidase family M19) J5285_21085 PF00005 ABC transporter J5285_21085 PF08402 TOBE domain J5285_21090 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21095 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21100 PF00135 Carboxylesterase family J5285_21105 PF00291 Pyridoxal-phosphate dependent enzyme J5285_21110 PF03466 LysR substrate binding domain J5285_21110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_21120 PF00005 ABC transporter J5285_21120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_21125 PF00005 ABC transporter J5285_21125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_21130 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21130 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_21135 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_21145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J5285_21145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J5285_21155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_21155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_21175 PF00171 Aldehyde dehydrogenase family J5285_21180 PF04070 Domain of unknown function (DUF378) J5285_21185 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J5285_21190 PF00919 Uncharacterized protein family UPF0004 J5285_21190 PF04055 Radical SAM superfamily J5285_21200 PF01488 Shikimate / quinate 5-dehydrogenase J5285_21200 PF08501 Shikimate dehydrogenase substrate binding domain J5285_21200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J5285_21205 PF00005 ABC transporter J5285_21210 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21215 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21220 PF01220 Dehydroquinase class II J5285_21225 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_21230 PF07729 FCD domain J5285_21230 PF00392 Bacterial regulatory proteins, gntR family J5285_21235 PF01799 [2Fe-2S] binding domain J5285_21235 PF10518 TAT (twin-arginine translocation) pathway signal sequence J5285_21235 PF00111 2Fe-2S iron-sulfur cluster binding domain J5285_21240 PF03450 CO dehydrogenase flavoprotein C-terminal domain J5285_21240 PF00941 FAD binding domain in molybdopterin dehydrogenase J5285_21245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J5285_21245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J5285_21250 PF02625 XdhC and CoxI family J5285_21250 PF13478 XdhC Rossmann domain J5285_21280 PF02706 Chain length determinant protein J5285_21280 PF13807 G-rich domain on putative tyrosine kinase J5285_21280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_21295 PF00534 Glycosyl transferases group 1 J5285_21295 PF13439 Glycosyltransferase Family 4 J5285_21310 PF13439 Glycosyltransferase Family 4 J5285_21350 PF07690 Major Facilitator Superfamily J5285_21355 PF07715 TonB-dependent Receptor Plug Domain J5285_21355 PF00593 TonB dependent receptor J5285_21360 PF04773 FecR protein J5285_21360 PF16220 Domain of unknown function (DUF4880) J5285_21385 PF07729 FCD domain J5285_21385 PF00392 Bacterial regulatory proteins, gntR family J5285_21390 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_21395 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21400 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21405 PF00005 ABC transporter J5285_21410 PF01055 Glycosyl hydrolases family 31 J5285_21415 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21420 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21425 PF01547 Bacterial extracellular solute-binding protein J5285_21430 PF08402 TOBE domain J5285_21430 PF00005 ABC transporter J5285_21435 PF07702 UTRA domain J5285_21435 PF00392 Bacterial regulatory proteins, gntR family J5285_21440 PF00296 Luciferase-like monooxygenase J5285_21445 PF00248 Aldo/keto reductase family J5285_21450 PF01613 Flavin reductase like domain J5285_21460 PF11818 C-terminal domain of tail specific protease (DUF3340) J5285_21460 PF00595 PDZ domain J5285_21460 PF03572 Peptidase family S41 J5285_21460 PF17804 Tail specific protease N-terminal domain J5285_21465 PF00563 EAL domain J5285_21465 PF08447 PAS fold J5285_21465 PF00990 Diguanylate cyclase, GGDEF domain J5285_21465 PF08448 PAS fold J5285_21470 PF13419 Haloacid dehalogenase-like hydrolase J5285_21475 PF00860 Permease family J5285_21480 PF07690 Major Facilitator Superfamily J5285_21485 PF00202 Aminotransferase class-III J5285_21490 PF00282 Pyridoxal-dependent decarboxylase conserved domain J5285_21495 PF04183 IucA / IucC family J5285_21495 PF06276 Ferric iron reductase FhuF-like transporter J5285_21505 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) J5285_21510 PF04183 IucA / IucC family J5285_21510 PF06276 Ferric iron reductase FhuF-like transporter J5285_21515 PF12833 Helix-turn-helix domain J5285_21520 PF00593 TonB dependent receptor J5285_21520 PF07715 TonB-dependent Receptor Plug Domain J5285_21565 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J5285_21595 PF00072 Response regulator receiver domain J5285_21595 PF13426 PAS domain J5285_21595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_21600 PF00486 Transcriptional regulatory protein, C terminal J5285_21600 PF00072 Response regulator receiver domain J5285_21615 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21620 PF00005 ABC transporter J5285_21620 PF08402 TOBE domain J5285_21625 PF00459 Inositol monophosphatase family J5285_21635 PF01053 Cys/Met metabolism PLP-dependent enzyme J5285_21640 PF01547 Bacterial extracellular solute-binding protein J5285_21645 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21650 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21655 PF17912 MalK OB fold domain J5285_21655 PF00005 ABC transporter J5285_21685 PF03466 LysR substrate binding domain J5285_21685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_21690 PF00248 Aldo/keto reductase family J5285_21695 PF07690 Major Facilitator Superfamily J5285_21710 PF02559 CarD-like/TRCF domain J5285_21710 PF00270 DEAD/DEAH box helicase J5285_21710 PF00271 Helicase conserved C-terminal domain J5285_21710 PF03461 TRCF domain J5285_21710 PF17757 UvrB interaction domain J5285_21715 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J5285_21720 PF03786 D-mannonate dehydratase (UxuA) J5285_21725 PF00005 ABC transporter J5285_21725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_21730 PF00005 ABC transporter J5285_21730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_21735 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_21735 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21740 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_21760 PF00480 ROK family J5285_21770 PF00440 Bacterial regulatory proteins, tetR family J5285_21775 PF00561 alpha/beta hydrolase fold J5285_21785 PF01638 HxlR-like helix-turn-helix J5285_21790 PF00356 Bacterial regulatory proteins, lacI family J5285_21805 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21810 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_21810 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21815 PF00005 ABC transporter J5285_21815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_21820 PF01261 Xylose isomerase-like TIM barrel J5285_21825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5285_21825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5285_21830 PF05161 MOFRL family J5285_21830 PF13660 Domain of unknown function (DUF4147) J5285_21845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_21850 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21855 PF00528 Binding-protein-dependent transport system inner membrane component J5285_21855 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_21860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_21860 PF00005 ABC transporter J5285_21910 PF02195 ParB-like nuclease domain J5285_21910 PF17762 HTH domain found in ParB protein J5285_21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_21950 PF03466 LysR substrate binding domain J5285_21955 PF08240 Alcohol dehydrogenase GroES-like domain J5285_21955 PF00107 Zinc-binding dehydrogenase J5285_21960 PF17754 MftR C-terminal domain J5285_21960 PF00440 Bacterial regulatory proteins, tetR family J5285_21990 PF01638 HxlR-like helix-turn-helix J5285_22010 PF05284 Protein of unknown function (DUF736) J5285_22020 PF00216 Bacterial DNA-binding protein J5285_22035 PF02534 Type IV secretory system Conjugative DNA transfer J5285_22040 PF06412 Conjugal transfer protein TraD J5285_22045 PF07820 TraC-like protein J5285_22050 PF01443 Viral (Superfamily 1) RNA helicase J5285_22050 PF17841 BID domain of Bartonella effector protein (Bep) J5285_22050 PF03389 MobA/MobL family J5285_22055 PF10502 Signal peptidase, peptidase S26 J5285_22060 PF00795 Carbon-nitrogen hydrolase J5285_22065 PF06871 TraH_2 J5285_22085 PF09228 Prokaryotic Transcriptional repressor TraM J5285_22090 PF00196 Bacterial regulatory proteins, luxR family J5285_22090 PF03472 Autoinducer binding domain J5285_22100 PF02690 Na+/Pi-cotransporter J5285_22105 PF00459 Inositol monophosphatase family J5285_22110 PF03009 Glycerophosphoryl diester phosphodiesterase family J5285_22120 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22125 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22130 PF08402 TOBE domain J5285_22130 PF00005 ABC transporter J5285_22135 PF00480 ROK family J5285_22140 PF07929 Plasmid pRiA4b ORF-3-like protein J5285_22145 PF13007 Transposase C of IS166 homeodomain J5285_22145 PF13005 zinc-finger binding domain of transposase IS66 J5285_22145 PF13817 IS66 C-terminal element J5285_22145 PF03050 Transposase IS66 family J5285_22150 PF05717 IS66 Orf2 like protein J5285_22170 PF00982 Glycosyltransferase family 20 J5285_22190 PF13276 HTH-like domain J5285_22190 PF13683 Integrase core domain J5285_22205 PF13458 Periplasmic binding protein J5285_22210 PF00155 Aminotransferase class I and II J5285_22230 PF00486 Transcriptional regulatory protein, C terminal J5285_22230 PF00072 Response regulator receiver domain J5285_22235 PF00672 HAMP domain J5285_22235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_22235 PF00512 His Kinase A (phospho-acceptor) domain J5285_22250 PF00664 ABC transporter transmembrane region J5285_22250 PF00005 ABC transporter J5285_22250 PF03412 Peptidase C39 family J5285_22270 PF07929 Plasmid pRiA4b ORF-3-like protein J5285_22300 PF02705 K+ potassium transporter J5285_22315 PF00067 Cytochrome P450 J5285_22320 PF00512 His Kinase A (phospho-acceptor) domain J5285_22320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_22335 PF13358 DDE superfamily endonuclease J5285_22340 PF01464 Transglycosylase SLT domain J5285_22345 PF04956 TrbC/VIRB2 family J5285_22350 PF05101 Type IV secretory pathway, VirB3-like protein J5285_22355 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J5285_22365 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J5285_22370 PF17413 Outer membrane lipoprotein virB7 J5285_22375 PF04335 VirB8 protein J5285_22380 PF03524 Conjugal transfer protein J5285_22385 PF03743 Bacterial conjugation TrbI-like protein J5285_22390 PF00437 Type II/IV secretion system protein J5285_22395 PF00072 Response regulator receiver domain J5285_22395 PF00486 Transcriptional regulatory protein, C terminal J5285_22400 PF07181 VirC2 protein J5285_22405 PF07015 VirC1 protein J5285_22410 PF07328 T-DNA border endonuclease VirD1 J5285_22415 PF03432 Relaxase/Mobilisation nuclease domain J5285_22425 PF02534 Type IV secretory system Conjugative DNA transfer J5285_22435 PF12189 Single-strand DNA-binding protein J5285_22440 PF07229 VirE2 J5285_22475 PF05717 IS66 Orf2 like protein J5285_22480 PF01527 Transposase J5285_22500 PF03050 Transposase IS66 family J5285_22500 PF13817 IS66 C-terminal element J5285_22500 PF13007 Transposase C of IS166 homeodomain J5285_22500 PF13005 zinc-finger binding domain of transposase IS66 J5285_22505 PF05717 IS66 Orf2 like protein J5285_22510 PF01527 Transposase J5285_22530 PF01425 Amidase J5285_22535 PF01593 Flavin containing amine oxidoreductase J5285_22535 PF02027 RolB/RolC glucosidase family J5285_22550 PF01380 SIS domain J5285_22555 PF00300 Histidine phosphatase superfamily (branch 1) J5285_22555 PF00106 short chain dehydrogenase J5285_22560 PF00557 Metallopeptidase family M24 J5285_22560 PF01321 Creatinase/Prolidase N-terminal domain J5285_22570 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain J5285_22570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J5285_22580 PF02423 Ornithine cyclodeaminase/mu-crystallin family J5285_22585 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain J5285_22590 PF00491 Arginase family J5285_22595 PF04324 BFD-like [2Fe-2S] binding domain J5285_22595 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_22605 PF01266 FAD dependent oxidoreductase J5285_22610 PF03466 LysR substrate binding domain J5285_22610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_22615 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22620 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22625 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_22630 PF00005 ABC transporter J5285_22635 PF03466 LysR substrate binding domain J5285_22635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_22640 PF01037 Lrp/AsnC ligand binding domain J5285_22650 PF01053 Cys/Met metabolism PLP-dependent enzyme J5285_22655 PF01636 Phosphotransferase enzyme family J5285_22665 PF02574 Homocysteine S-methyltransferase J5285_22670 PF03472 Autoinducer binding domain J5285_22670 PF00196 Bacterial regulatory proteins, luxR family J5285_22685 PF00005 ABC transporter J5285_22685 PF08402 TOBE domain J5285_22690 PF00557 Metallopeptidase family M24 J5285_22690 PF01321 Creatinase/Prolidase N-terminal domain J5285_22695 PF00294 pfkB family carbohydrate kinase J5285_22710 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22715 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22720 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_22730 PF13936 Helix-turn-helix domain J5285_22730 PF00665 Integrase core domain J5285_22745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_22745 PF00529 HlyD membrane-fusion protein of T1SS J5285_22750 PF00529 HlyD membrane-fusion protein of T1SS J5285_22750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_22765 PF01638 HxlR-like helix-turn-helix J5285_22795 PF08240 Alcohol dehydrogenase GroES-like domain J5285_22795 PF00107 Zinc-binding dehydrogenase J5285_22795 PF16197 Ketoacyl-synthetase C-terminal extension J5285_22795 PF02801 Beta-ketoacyl synthase, C-terminal domain J5285_22795 PF08659 KR domain J5285_22795 PF00550 Phosphopantetheine attachment site J5285_22795 PF14765 Polyketide synthase dehydratase J5285_22795 PF00698 Acyl transferase domain J5285_22795 PF00109 Beta-ketoacyl synthase, N-terminal domain J5285_22800 PF00440 Bacterial regulatory proteins, tetR family J5285_22805 PF00171 Aldehyde dehydrogenase family J5285_22825 PF00005 ABC transporter J5285_22825 PF00571 CBS domain J5285_22830 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22835 PF00528 Binding-protein-dependent transport system inner membrane component J5285_22845 PF00296 Luciferase-like monooxygenase J5285_22850 PF08240 Alcohol dehydrogenase GroES-like domain J5285_22850 PF00107 Zinc-binding dehydrogenase J5285_22855 PF03358 NADPH-dependent FMN reductase J5285_22865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J5285_22880 PF01638 HxlR-like helix-turn-helix J5285_22885 PF03466 LysR substrate binding domain J5285_22885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_22925 PF00512 His Kinase A (phospho-acceptor) domain J5285_22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_22925 PF00672 HAMP domain J5285_22930 PF00072 Response regulator receiver domain J5285_22930 PF00486 Transcriptional regulatory protein, C terminal J5285_22960 PF03466 LysR substrate binding domain J5285_22960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_22965 PF07690 Major Facilitator Superfamily J5285_22970 PF00180 Isocitrate/isopropylmalate dehydrogenase J5285_22975 PF05161 MOFRL family J5285_22975 PF13660 Domain of unknown function (DUF4147) J5285_22985 PF13298 DNA polymerase Ligase (LigD) J5285_22985 PF04679 ATP dependent DNA ligase C terminal region J5285_22985 PF01068 ATP dependent DNA ligase domain J5285_23000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J5285_23000 PF00356 Bacterial regulatory proteins, lacI family J5285_23010 PF00067 Cytochrome P450 J5285_23015 PF07992 Pyridine nucleotide-disulphide oxidoreductase J5285_23015 PF14759 Reductase C-terminal J5285_23020 PF00005 ABC transporter J5285_23025 PF02653 Branched-chain amino acid transport system / permease component J5285_23030 PF02653 Branched-chain amino acid transport system / permease component J5285_23035 PF01156 Inosine-uridine preferring nucleoside hydrolase J5285_23055 PF01527 Transposase J5285_23060 PF05717 IS66 Orf2 like protein J5285_23065 PF03050 Transposase IS66 family J5285_23065 PF13005 zinc-finger binding domain of transposase IS66 J5285_23065 PF13007 Transposase C of IS166 homeodomain J5285_23065 PF13817 IS66 C-terminal element J5285_23080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5285_23080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_23085 PF00890 FAD binding domain J5285_23090 PF05199 GMC oxidoreductase J5285_23090 PF00732 GMC oxidoreductase J5285_23095 PF01266 FAD dependent oxidoreductase J5285_23105 PF00171 Aldehyde dehydrogenase family J5285_23110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J5285_23110 PF00925 GTP cyclohydrolase II J5285_23115 PF02954 Bacterial regulatory protein, Fis family J5285_23115 PF01590 GAF domain J5285_23115 PF00158 Sigma-54 interaction domain J5285_23120 PF01613 Flavin reductase like domain J5285_23125 PF00296 Luciferase-like monooxygenase J5285_23130 PF07690 Major Facilitator Superfamily J5285_23140 PF03313 Serine dehydratase alpha chain J5285_23140 PF03315 Serine dehydratase beta chain J5285_23155 PF00005 ABC transporter J5285_23155 PF08402 TOBE domain J5285_23160 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23165 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23170 PF05199 GMC oxidoreductase J5285_23170 PF00732 GMC oxidoreductase J5285_23175 PF05161 MOFRL family J5285_23175 PF13660 Domain of unknown function (DUF4147) J5285_23180 PF01548 Transposase J5285_23180 PF02371 Transposase IS116/IS110/IS902 family J5285_23205 PF07676 WD40-like Beta Propeller Repeat J5285_23210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_23220 PF17912 MalK OB fold domain J5285_23220 PF00005 ABC transporter J5285_23225 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23230 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23235 PF01547 Bacterial extracellular solute-binding protein J5285_23240 PF00356 Bacterial regulatory proteins, lacI family J5285_23260 PF17912 MalK OB fold domain J5285_23260 PF00005 ABC transporter J5285_23260 PF03459 TOBE domain J5285_23265 PF00248 Aldo/keto reductase family J5285_23270 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23275 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23285 PF03786 D-mannonate dehydratase (UxuA) J5285_23290 PF01614 Bacterial transcriptional regulator J5285_23290 PF09339 IclR helix-turn-helix domain J5285_23295 PF13378 Enolase C-terminal domain-like J5285_23295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_23300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_23300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_23305 PF03928 Haem-degrading J5285_23310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_23310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_23315 PF08240 Alcohol dehydrogenase GroES-like domain J5285_23315 PF00107 Zinc-binding dehydrogenase J5285_23320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5285_23320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_23335 PF03328 HpcH/HpaI aldolase/citrate lyase family J5285_23350 PF05378 Hydantoinase/oxoprolinase N-terminal region J5285_23350 PF01968 Hydantoinase/oxoprolinase J5285_23355 PF03466 LysR substrate binding domain J5285_23355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_23360 PF00155 Aminotransferase class I and II J5285_23365 PF00005 ABC transporter J5285_23370 PF00005 ABC transporter J5285_23370 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_23375 PF02653 Branched-chain amino acid transport system / permease component J5285_23380 PF02653 Branched-chain amino acid transport system / permease component J5285_23385 PF13458 Periplasmic binding protein J5285_23430 PF03328 HpcH/HpaI aldolase/citrate lyase family J5285_23440 PF02515 CoA-transferase family III J5285_23445 PF02515 CoA-transferase family III J5285_23460 PF07729 FCD domain J5285_23460 PF00392 Bacterial regulatory proteins, gntR family J5285_23465 PF00753 Metallo-beta-lactamase superfamily J5285_23470 PF00005 ABC transporter J5285_23475 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_23475 PF00005 ABC transporter J5285_23485 PF02653 Branched-chain amino acid transport system / permease component J5285_23490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J5285_23490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5285_23505 PF02515 CoA-transferase family III J5285_23510 PF01047 MarR family J5285_23520 PF00581 Rhodanese-like domain J5285_23525 PF00005 ABC transporter J5285_23530 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23545 PF00296 Luciferase-like monooxygenase J5285_23550 PF00581 Rhodanese-like domain J5285_23565 PF03743 Bacterial conjugation TrbI-like protein J5285_23575 PF03524 Conjugal transfer protein J5285_23580 PF04335 VirB8 protein J5285_23585 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J5285_23590 PF10907 Protein of unknown function (DUF2749) J5285_23600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J5285_23605 PF05101 Type IV secretory pathway, VirB3-like protein J5285_23610 PF04956 TrbC/VIRB2 family J5285_23615 PF00437 Type II/IV secretion system protein J5285_23620 PF00765 Autoinducer synthase J5285_23625 PF13614 AAA domain J5285_23630 PF07506 RepB plasmid partitioning protein J5285_23630 PF02195 ParB-like nuclease domain J5285_23635 PF03428 Replication protein C N-terminal domain J5285_23635 PF11800 Replication protein C C-terminal region J5285_23665 PF01695 IstB-like ATP binding protein J5285_23670 PF08281 Sigma-70, region 4 J5285_23670 PF00665 Integrase core domain J5285_23680 PF07516 SecA Wing and Scaffold domain J5285_23680 PF02810 SEC-C motif J5285_23680 PF07517 SecA DEAD-like domain J5285_23680 PF01043 SecA preprotein cross-linking domain J5285_23705 PF01548 Transposase J5285_23705 PF02371 Transposase IS116/IS110/IS902 family J5285_23715 PF00665 Integrase core domain J5285_23720 PF03358 NADPH-dependent FMN reductase J5285_23725 PF00296 Luciferase-like monooxygenase J5285_23730 PF12399 Branched-chain amino acid ATP-binding cassette transporter J5285_23730 PF00005 ABC transporter J5285_23740 PF02653 Branched-chain amino acid transport system / permease component J5285_23750 PF00005 ABC transporter J5285_23755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5285_23755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_23755 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_23765 PF00266 Aminotransferase class-V J5285_23845 PF01022 Bacterial regulatory protein, arsR family J5285_23850 PF12833 Helix-turn-helix domain J5285_23850 PF14525 AraC-binding-like domain J5285_23870 PF00313 'Cold-shock' DNA-binding domain J5285_23885 PF00364 Biotin-requiring enzyme J5285_23890 PF02785 Biotin carboxylase C-terminal domain J5285_23890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_23890 PF00289 Biotin carboxylase, N-terminal domain J5285_23905 PF02626 Carboxyltransferase domain, subdomain A and B J5285_23910 PF03746 LamB/YcsF family J5285_23915 PF00155 Aminotransferase class I and II J5285_23920 PF03466 LysR substrate binding domain J5285_23920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_23925 PF00106 short chain dehydrogenase J5285_23930 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23935 PF00528 Binding-protein-dependent transport system inner membrane component J5285_23940 PF00005 ABC transporter J5285_23945 PF00497 Bacterial extracellular solute-binding proteins, family 3 J5285_23950 PF03737 Aldolase/RraA J5285_23965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J5285_23965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J5285_23970 PF08240 Alcohol dehydrogenase GroES-like domain J5285_23970 PF00107 Zinc-binding dehydrogenase J5285_23975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_23975 PF03466 LysR substrate binding domain J5285_23985 PF00456 Transketolase, thiamine diphosphate binding domain J5285_23990 PF02779 Transketolase, pyrimidine binding domain J5285_23990 PF02780 Transketolase, C-terminal domain J5285_23995 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_23995 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5285_24000 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_24000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J5285_24005 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5285_24010 PF00005 ABC transporter J5285_24015 PF02653 Branched-chain amino acid transport system / permease component J5285_24020 PF13407 Periplasmic binding protein domain J5285_24025 PF04909 Amidohydrolase J5285_24035 PF00356 Bacterial regulatory proteins, lacI family J5285_24040 PF13407 Periplasmic binding protein domain J5285_24045 PF00005 ABC transporter J5285_24050 PF02653 Branched-chain amino acid transport system / permease component J5285_24055 PF13407 Periplasmic binding protein domain J5285_24060 PF01261 Xylose isomerase-like TIM barrel J5285_24065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_24065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_24075 PF00294 pfkB family carbohydrate kinase J5285_24080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J5285_24080 PF00205 Thiamine pyrophosphate enzyme, central domain J5285_24080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J5285_24085 PF01261 Xylose isomerase-like TIM barrel J5285_24090 PF04962 KduI/IolB family J5285_24105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_24105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_24110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_24110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_24115 PF01261 Xylose isomerase-like TIM barrel J5285_24120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_24120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_24125 PF00356 Bacterial regulatory proteins, lacI family J5285_24130 PF13407 Periplasmic binding protein domain J5285_24135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_24135 PF00672 HAMP domain J5285_24145 PF00440 Bacterial regulatory proteins, tetR family J5285_24150 PF00873 AcrB/AcrD/AcrF family J5285_24155 PF00529 HlyD membrane-fusion protein of T1SS J5285_24155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_24165 PF07690 Major Facilitator Superfamily J5285_24180 PF03472 Autoinducer binding domain J5285_24180 PF00196 Bacterial regulatory proteins, luxR family J5285_24200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_24205 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24210 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_24210 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_24215 PF00005 ABC transporter J5285_24220 PF09587 Bacterial capsule synthesis protein PGA_cap J5285_24225 PF01425 Amidase J5285_24240 PF05284 Protein of unknown function (DUF736) J5285_24260 PF05406 WGR domain J5285_24265 PF02534 Type IV secretory system Conjugative DNA transfer J5285_24270 PF06412 Conjugal transfer protein TraD J5285_24275 PF07820 TraC-like protein J5285_24280 PF17841 BID domain of Bartonella effector protein (Bep) J5285_24280 PF03389 MobA/MobL family J5285_24280 PF01443 Viral (Superfamily 1) RNA helicase J5285_24285 PF10502 Signal peptidase, peptidase S26 J5285_24290 PF00795 Carbon-nitrogen hydrolase J5285_24295 PF06871 TraH_2 J5285_24310 PF01381 Helix-turn-helix J5285_24315 PF09228 Prokaryotic Transcriptional repressor TraM J5285_24320 PF03472 Autoinducer binding domain J5285_24320 PF00196 Bacterial regulatory proteins, luxR family J5285_24325 PF03743 Bacterial conjugation TrbI-like protein J5285_24330 PF08139 Prokaryotic membrane lipoprotein lipid attachment site J5285_24335 PF03524 Conjugal transfer protein J5285_24340 PF04335 VirB8 protein J5285_24345 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J5285_24360 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J5285_24365 PF05101 Type IV secretory pathway, VirB3-like protein J5285_24370 PF04956 TrbC/VIRB2 family J5285_24375 PF00437 Type II/IV secretion system protein J5285_24380 PF00765 Autoinducer synthase J5285_24415 PF14525 AraC-binding-like domain J5285_24415 PF12833 Helix-turn-helix domain J5285_24420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J5285_24430 PF03466 LysR substrate binding domain J5285_24430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_24445 PF03466 LysR substrate binding domain J5285_24445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_24485 PF02735 Ku70/Ku80 beta-barrel domain J5285_24490 PF02735 Ku70/Ku80 beta-barrel domain J5285_24495 PF04679 ATP dependent DNA ligase C terminal region J5285_24495 PF13298 DNA polymerase Ligase (LigD) J5285_24495 PF01068 ATP dependent DNA ligase domain J5285_24510 PF07859 alpha/beta hydrolase fold J5285_24520 PF00580 UvrD/REP helicase N-terminal domain J5285_24520 PF13361 UvrD-like helicase C-terminal domain J5285_24535 PF00459 Inositol monophosphatase family J5285_24540 PF03009 Glycerophosphoryl diester phosphodiesterase family J5285_24545 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24550 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24555 PF17912 MalK OB fold domain J5285_24555 PF00005 ABC transporter J5285_24565 PF00480 ROK family J5285_24565 PF01047 MarR family J5285_24580 PF06628 Catalase-related immune-responsive J5285_24580 PF00199 Catalase J5285_24580 PF18011 C-terminal domain found in long catalases J5285_24595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J5285_24595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J5285_24600 PF00534 Glycosyl transferases group 1 J5285_24600 PF13439 Glycosyltransferase Family 4 J5285_24605 PF00072 Response regulator receiver domain J5285_24605 PF00486 Transcriptional regulatory protein, C terminal J5285_24610 PF00672 HAMP domain J5285_24610 PF00512 His Kinase A (phospho-acceptor) domain J5285_24610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_24620 PF00202 Aminotransferase class-III J5285_24645 PF00892 EamA-like transporter family J5285_24655 PF13378 Enolase C-terminal domain-like J5285_24655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J5285_24665 PF07729 FCD domain J5285_24665 PF00392 Bacterial regulatory proteins, gntR family J5285_24670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_24670 PF00005 ABC transporter J5285_24675 PF00005 ABC transporter J5285_24675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_24680 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_24680 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24685 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_24695 PF13188 PAS domain J5285_24695 PF03707 Bacterial signalling protein N terminal repeat J5285_24695 PF00990 Diguanylate cyclase, GGDEF domain J5285_24695 PF00563 EAL domain J5285_24700 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J5285_24700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J5285_24715 PF01323 DSBA-like thioredoxin domain J5285_24720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J5285_24725 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24730 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24730 PF12911 N-terminal TM domain of oligopeptide transport permease C J5285_24735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J5285_24735 PF00005 ABC transporter J5285_24740 PF00296 Luciferase-like monooxygenase J5285_24745 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J5285_24750 PF03358 NADPH-dependent FMN reductase J5285_24755 PF01384 Phosphate transporter family J5285_24760 PF01865 Protein of unknown function DUF47 J5285_24770 PF00929 Exonuclease J5285_24790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_24790 PF03466 LysR substrate binding domain J5285_24795 PF00248 Aldo/keto reductase family J5285_24800 PF01381 Helix-turn-helix J5285_24810 PF03328 HpcH/HpaI aldolase/citrate lyase family J5285_24815 PF01575 MaoC like domain J5285_24820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J5285_24820 PF02785 Biotin carboxylase C-terminal domain J5285_24820 PF00289 Biotin carboxylase, N-terminal domain J5285_24820 PF00364 Biotin-requiring enzyme J5285_24825 PF01039 Carboxyl transferase domain J5285_24830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J5285_24830 PF02770 Acyl-CoA dehydrogenase, middle domain J5285_24830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J5285_24835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_24835 PF03466 LysR substrate binding domain J5285_24845 PF00550 Phosphopantetheine attachment site J5285_24865 PF07470 Glycosyl Hydrolase Family 88 J5285_24870 PF00295 Glycosyl hydrolases family 28 J5285_24880 PF00005 ABC transporter J5285_24880 PF08402 TOBE domain J5285_24885 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24890 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24895 PF02311 AraC-like ligand binding domain J5285_24895 PF12833 Helix-turn-helix domain J5285_24900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J5285_24910 PF03480 Bacterial extracellular solute-binding protein, family 7 J5285_24920 PF04962 KduI/IolB family J5285_24940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_24940 PF00672 HAMP domain J5285_24945 PF00202 Aminotransferase class-III J5285_24955 PF07729 FCD domain J5285_24955 PF00392 Bacterial regulatory proteins, gntR family J5285_24970 PF00005 ABC transporter J5285_24970 PF08402 TOBE domain J5285_24975 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24980 PF00528 Binding-protein-dependent transport system inner membrane component J5285_24985 PF00202 Aminotransferase class-III J5285_24990 PF00149 Calcineurin-like phosphoesterase J5285_24995 PF00722 Glycosyl hydrolases family 16 J5285_25005 PF00535 Glycosyl transferase family 2 J5285_25010 PF00535 Glycosyl transferase family 2 J5285_25015 PF00535 Glycosyl transferase family 2 J5285_25025 PF13807 G-rich domain on putative tyrosine kinase J5285_25025 PF02706 Chain length determinant protein J5285_25025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J5285_25035 PF02563 Polysaccharide biosynthesis/export protein J5285_25055 PF02397 Bacterial sugar transferase J5285_25060 PF01757 Acyltransferase family J5285_25070 PF01943 Polysaccharide biosynthesis protein J5285_25090 PF00664 ABC transporter transmembrane region J5285_25090 PF00005 ABC transporter J5285_25095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J5285_25095 PF00529 HlyD membrane-fusion protein of T1SS J5285_25120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_25120 PF00672 HAMP domain J5285_25125 PF06472 ABC transporter transmembrane region 2 J5285_25125 PF00005 ABC transporter J5285_25130 PF07886 BA14K-like protein J5285_25135 PF03631 Virulence factor BrkB J5285_25140 PF00563 EAL domain J5285_25140 PF04940 Sensors of blue-light using FAD J5285_25150 PF01965 DJ-1/PfpI family J5285_25150 PF12833 Helix-turn-helix domain J5285_25155 PF01261 Xylose isomerase-like TIM barrel J5285_25160 PF00485 Phosphoribulokinase / Uridine kinase family J5285_25165 PF01261 Xylose isomerase-like TIM barrel J5285_25170 PF02653 Branched-chain amino acid transport system / permease component J5285_25175 PF02653 Branched-chain amino acid transport system / permease component J5285_25180 PF00005 ABC transporter J5285_25190 PF00356 Bacterial regulatory proteins, lacI family J5285_25195 PF00296 Luciferase-like monooxygenase J5285_25210 PF13614 AAA domain J5285_25210 PF00376 MerR family regulatory protein J5285_25215 PF07506 RepB plasmid partitioning protein J5285_25215 PF02195 ParB-like nuclease domain J5285_25220 PF11800 Replication protein C C-terminal region J5285_25220 PF03428 Replication protein C N-terminal domain J5285_25225 PF00768 D-alanyl-D-alanine carboxypeptidase J5285_25225 PF07943 Penicillin-binding protein 5, C-terminal domain J5285_25235 PF00005 ABC transporter J5285_25245 PF04303 PrpF protein J5285_25250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J5285_25250 PF03466 LysR substrate binding domain J5285_25325 PF00239 Resolvase, N terminal domain J5285_25325 PF02796 Helix-turn-helix domain of resolvase J5285_25330 PF01526 Tn3 transposase DDE domain J5285_25330 PF13700 Domain of unknown function (DUF4158) J5285_25335 PF13700 Domain of unknown function (DUF4158) J5285_25335 PF01526 Tn3 transposase DDE domain J5285_25355 PF03747 ADP-ribosylglycohydrolase J5285_25365 PF13007 Transposase C of IS166 homeodomain J5285_25365 PF13817 IS66 C-terminal element J5285_25365 PF03050 Transposase IS66 family J5285_25365 PF13005 zinc-finger binding domain of transposase IS66 J5285_25370 PF05717 IS66 Orf2 like protein J5285_25375 PF01527 Transposase J5285_25385 PF03527 RHS protein J5285_25385 PF05593 RHS Repeat J5285_25405 PF06715 Gp5 C-terminal repeat (3 copies) J5285_25405 PF04717 Type VI secretion system, phage-baseplate injector J5285_25420 PF11972 HTH DNA binding domain J5285_25420 PF07756 Protein of unknown function (DUF1612) J5285_25450 PF13276 HTH-like domain J5285_25450 PF01527 Transposase J5285_25450 PF00665 Integrase core domain J5285_25450 PF13333 Integrase core domain J5285_25485 PF06532 Negative regulator of sigma F J5285_25490 PF04545 Sigma-70, region 4 J5285_25490 PF04542 Sigma-70 region 2 J5285_25500 PF01292 Prokaryotic cytochrome b561 J5285_25505 PF00174 Oxidoreductase molybdopterin binding domain J5285_25530 PF02469 Fasciclin domain J5285_25540 PF05717 IS66 Orf2 like protein J5285_25545 PF13817 IS66 C-terminal element J5285_25545 PF03050 Transposase IS66 family J5285_25545 PF13007 Transposase C of IS166 homeodomain J5285_25545 PF13005 zinc-finger binding domain of transposase IS66 J5285_25550 PF07929 Plasmid pRiA4b ORF-3-like protein J5285_25555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J5285_25555 PF00672 HAMP domain J5285_25570 PF12728 Helix-turn-helix domain J5285_25570 PF02661 Fic/DOC family J5285_25605 PF00072 Response regulator receiver domain J5285_25610 PF13581 Histidine kinase-like ATPase domain J5285_25610 PF07568 Histidine kinase J5285_25610 PF13426 PAS domain J5285_25615 PF00512 His Kinase A (phospho-acceptor) domain J5285_25615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_25615 PF13188 PAS domain J5285_25615 PF00072 Response regulator receiver domain J5285_25615 PF08448 PAS fold J5285_25620 PF00072 Response regulator receiver domain J5285_25620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_25620 PF13426 PAS domain J5285_25635 PF07536 HWE histidine kinase J5285_25635 PF08447 PAS fold J5285_25635 PF13426 PAS domain J5285_25645 PF06965 Na+/H+ antiporter 1 J5285_25655 PF02028 BCCT, betaine/carnitine/choline family transporter J5285_25660 PF10011 Predicted membrane protein (DUF2254) J5285_25665 PF01758 Sodium Bile acid symporter family J5285_25670 PF07536 HWE histidine kinase J5285_25670 PF13426 PAS domain J5285_25670 PF13581 Histidine kinase-like ATPase domain J5285_25675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_25675 PF13426 PAS domain J5285_25675 PF00072 Response regulator receiver domain J5285_25680 PF07536 HWE histidine kinase J5285_25680 PF08447 PAS fold J5285_25680 PF13426 PAS domain J5285_25700 PF13298 DNA polymerase Ligase (LigD) J5285_25700 PF01068 ATP dependent DNA ligase domain J5285_25700 PF04679 ATP dependent DNA ligase C terminal region J5285_25715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J5285_25715 PF14579 Helix-hairpin-helix motif J5285_25715 PF07733 Bacterial DNA polymerase III alpha NTPase domain J5285_25715 PF02811 PHP domain J5285_25725 PF00672 HAMP domain J5285_25725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J5285_25725 PF00512 His Kinase A (phospho-acceptor) domain J5285_25730 PF00072 Response regulator receiver domain J5285_25730 PF00486 Transcriptional regulatory protein, C terminal J5285_25745 PF01636 Phosphotransferase enzyme family J5285_25750 PF02796 Helix-turn-helix domain of resolvase J5285_25750 PF00239 Resolvase, N terminal domain J5285_25760 PF02371 Transposase IS116/IS110/IS902 family J5285_25760 PF01548 Transposase J5285_25825 PF03428 Replication protein C N-terminal domain J5285_25825 PF11800 Replication protein C C-terminal region J5285_25860 PF05101 Type IV secretory pathway, VirB3-like protein J5285_25865 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J5285_25885 PF04335 VirB8 protein J5285_25890 PF03524 Conjugal transfer protein J5285_25895 PF03743 Bacterial conjugation TrbI-like protein J5285_25900 PF00437 Type II/IV secretion system protein J5285_25905 PF02534 Type IV secretory system Conjugative DNA transfer J5285_25920 PF18543 Intracellular delivery domain J5285_25920 PF02661 Fic/DOC family J5285_25950 PF17762 HTH domain found in ParB protein J5285_25950 PF02195 ParB-like nuclease domain J5285_25955 PF13614 AAA domain J5285_25995 PF00239 Resolvase, N terminal domain J5285_25995 PF02796 Helix-turn-helix domain of resolvase J5285_26005 PF07704 Rv0623-like transcription factor J5285_26010 PF01850 PIN domain J5285_26075 PF13298 DNA polymerase Ligase (LigD) J5285_26075 PF04679 ATP dependent DNA ligase C terminal region J5285_26075 PF01068 ATP dependent DNA ligase domain J5285_26095 PF00717 Peptidase S24-like J5285_26100 PF13438 Domain of unknown function (DUF4113) J5285_26100 PF00817 impB/mucB/samB family J5285_26100 PF11799 impB/mucB/samB family C-terminal domain