locus-tag	class	description
B0909_00005	COG3842	ATPase activity
B0909_00010	COG0395	ABC-type sugar transport system, permease component
B0909_00025	COG3976	FMN-binding domain protein
B0909_00025	COG1053	succinate dehydrogenase
B0909_00030	COG1609	Transcriptional regulator
B0909_00060	COG2084	Dehydrogenase
B0909_00065	COG3622	Belongs to the hyi family
B0909_00075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_00080	COG0601	transmembrane transport
B0909_00090	COG0747	negative chemotaxis
B0909_00095	COG1609	Transcriptional regulator
B0909_00100	COG1902	pentaerythritol trinitrate reductase activity
B0909_00110	COG0583	DNA-binding transcription factor activity
B0909_00125	COG0477	Major facilitator Superfamily
B0909_00130	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
B0909_00135	COG0251	oxidation-reduction process
B0909_00140	COG2423	ornithine cyclodeaminase activity
B0909_00150	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
B0909_00170	COG1335	isochorismatase
B0909_00175	COG0583	DNA-binding transcription factor activity
B0909_00180	COG0583	DNA-binding transcription factor activity
B0909_00190	COG1335	isochorismatase
B0909_00200	COG0583	DNA-binding transcription factor activity
B0909_00210	COG2207	Transcriptional regulator
B0909_00210	COG3708	Transcriptional regulator
B0909_00220	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_00220	COG1388	LysM domain
B0909_00230	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
B0909_00230	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
B0909_00235	COG4232	protein-disulfide reductase activity
B0909_00240	COG0745	RESPONSE REGULATOR receiver
B0909_00245	COG0642	Histidine kinase
B0909_00250	COG1902	pentaerythritol trinitrate reductase activity
B0909_00250	COG0446	pyridine nucleotide-disulphide oxidoreductase
B0909_00260	COG0745	RESPONSE REGULATOR receiver
B0909_00290	COG1960	acyl-CoA dehydrogenase activity
B0909_00350	COG0601	transmembrane transport
B0909_00360	COG0444	Belongs to the ABC transporter superfamily
B0909_00365	COG4608	Belongs to the ABC transporter superfamily
B0909_00380	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
B0909_00390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_00395	COG3842	ATPase activity
B0909_00400	COG0395	ABC-type sugar transport system, permease component
B0909_00405	COG1175	transmembrane transport
B0909_00420	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_00430	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_00435	COG1335	isochorismatase
B0909_00440	COG0251	oxidation-reduction process
B0909_00445	COG2267	carboxylic ester hydrolase activity
B0909_00450	COG0778	Nitroreductase
B0909_00455	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
B0909_00460	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
B0909_00480	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
B0909_00490	COG0288	reversible hydration of carbon dioxide
B0909_00495	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
B0909_00500	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
B0909_00520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_00530	COG0583	DNA-binding transcription factor activity
B0909_00540	COG2814	Major facilitator Superfamily
B0909_00545	COG0656	L-ascorbic acid biosynthetic process
B0909_00560	COG0783	Belongs to the Dps family
B0909_00565	COG4604	ABC transporter, ATP-binding protein
B0909_00570	COG4605	iron ion homeostasis
B0909_00575	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_00620	COG2205	protein histidine kinase activity
B0909_00640	COG3721	Heme iron utilization protein
B0909_00650	COG4558	Periplasmic binding protein
B0909_00655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_00660	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
B0909_00665	COG2832	Protein of unknown function (DUF454)
B0909_00675	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
B0909_00685	COG0346	lactoylglutathione lyase activity
B0909_00715	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
B0909_00725	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
B0909_00735	COG0564	pseudouridine synthase activity
B0909_00815	COG1218	3'(2'),5'-bisphosphate nucleotidase
B0909_00830	COG0411	ABC transporter
B0909_00850	COG0726	polysaccharide deacetylase
B0909_00865	COG0784	Response regulator, receiver
B0909_00865	COG2198	Histidine kinase
B0909_00865	COG5002	protein histidine kinase activity
B0909_00870	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_00875	COG0174	glutamine synthetase
B0909_00890	COG0559	Belongs to the binding-protein-dependent transport system permease family
B0909_00900	COG0411	ABC transporter
B0909_00920	COG0829	nickel cation binding
B0909_00925	COG0831	urea catabolic process
B0909_00930	COG3813	Protein conserved in bacteria
B0909_00935	COG0832	Belongs to the urease beta subunit family
B0909_00945	COG3755	Protein conserved in bacteria
B0909_00950	COG1442	glycosyl transferase family 8
B0909_00955	COG0804	urea catabolic process
B0909_00970	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
B0909_00975	COG0830	nickel cation binding
B0909_00980	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
B0909_01010	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_01015	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_01025	COG0494	nUDIX hydrolase
B0909_01040	COG1309	transcriptional regulator
B0909_01060	COG2346	COG2346, Truncated hemoglobins
B0909_01065	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
B0909_01080	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
B0909_01095	COG1215	transferase activity, transferring glycosyl groups
B0909_01130	COG4215	(ABC) transporter
B0909_01140	COG0646	methionine synthase
B0909_01140	COG1410	methionine synthase
B0909_01155	COG0840	transmembrane signaling receptor activity
B0909_01160	COG3238	Protein conserved in bacteria
B0909_01165	COG1247	-acetyltransferase
B0909_01195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_01200	COG4974	Belongs to the 'phage' integrase family
B0909_01215	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
B0909_01245	COG3501	Rhs element vgr protein
B0909_01270	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
B0909_01280	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
B0909_01320	COG4213	ABC transporter substrate-binding protein
B0909_01330	COG4214	carbohydrate transport
B0909_01360	COG1305	Transglutaminase-like
B0909_01370	COG2308	Evidence 4 Homologs of previously reported genes of
B0909_01380	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_01385	COG2259	Doxx family
B0909_01395	COG0513	Belongs to the DEAD box helicase family
B0909_01400	COG2205	protein histidine kinase activity
B0909_01400	COG0784	Response regulator, receiver
B0909_01400	COG5002	protein histidine kinase activity
B0909_01405	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
B0909_01405	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_01410	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
B0909_01410	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_01415	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
B0909_01425	COG3195	allantoin biosynthetic process
B0909_01425	COG3648	Uricase
B0909_01440	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
B0909_01445	COG2351	hydroxyisourate hydrolase activity
B0909_01455	COG1686	Belongs to the peptidase S11 family
B0909_01460	COG1309	transcriptional regulator
B0909_01470	COG1304	FMN binding
B0909_01480	COG0402	S-adenosylhomocysteine deaminase activity
B0909_01495	COG0583	DNA-binding transcription factor activity
B0909_01505	COG1529	Aldehyde oxidase and xanthine dehydrogenase
B0909_01520	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_01535	COG0024	Methionine aminopeptidase
B0909_01550	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
B0909_01570	COG1160	GTP binding
B0909_01590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_01595	COG0366	Alpha amylase catalytic
B0909_01605	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
B0909_01620	COG0512	Glutamine amidotransferase of anthranilate synthase
B0909_01620	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
B0909_01635	COG4771	TonB-dependent receptor
B0909_01635	COG1629	transport
B0909_01640	COG2862	Uncharacterized protein family, UPF0114
B0909_01660	COG1435	thymidine kinase activity
B0909_01675	COG4175	Glycine betaine
B0909_01705	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
B0909_01710	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
B0909_01725	COG0740	serine-type endopeptidase activity
B0909_01750	COG3135	benzoate transporter
B0909_01760	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
B0909_01770	COG0494	nUDIX hydrolase
B0909_01775	COG0435	Glutathione S-transferase
B0909_01785	COG0477	Major facilitator Superfamily
B0909_01800	COG0454	-acetyltransferase
B0909_01820	COG0714	Associated with various cellular activities
B0909_01830	COG0494	nUDIX hydrolase
B0909_01835	COG0617	tRNA 3'-terminal CCA addition
B0909_01850	COG0408	coproporphyrinogen oxidase activity
B0909_01865	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
B0909_01875	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
B0909_01880	COG1132	(ABC) transporter
B0909_01890	COG1132	(ABC) transporter
B0909_01895	COG0840	transmembrane signaling receptor activity
B0909_01915	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
B0909_01915	COG2857	Cytochrome c1
B0909_01920	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
B0909_01945	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
B0909_01955	COG0193	aminoacyl-tRNA hydrolase activity
B0909_01965	COG5001	Diguanylate cyclase
B0909_01970	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
B0909_01975	COG5001	Diguanylate cyclase
B0909_01975	COG3300	MHYT domain
B0909_01985	COG1012	belongs to the aldehyde dehydrogenase family
B0909_01990	COG0840	transmembrane signaling receptor activity
B0909_02015	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
B0909_02040	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
B0909_02060	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
B0909_02065	COG2205	protein histidine kinase activity
B0909_02070	COG0745	RESPONSE REGULATOR receiver
B0909_02075	COG1846	Transcriptional regulator
B0909_02085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
B0909_02090	COG1278	Cold shock
B0909_02110	COG2199	diguanylate cyclase activity
B0909_02110	COG2200	EAL domain
B0909_02120	COG0387	Pfam Sodium calcium exchanger
B0909_02150	COG1902	pentaerythritol trinitrate reductase activity
B0909_02160	COG0583	DNA-binding transcription factor activity
B0909_02165	COG0492	ferredoxin-NADP+ reductase activity
B0909_02170	COG1522	sequence-specific DNA binding
B0909_02180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
B0909_02190	COG1573	uracil-dna glycosylase
B0909_02195	COG3706	GGDEF domain
B0909_02205	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
B0909_02220	COG2321	neutral zinc metallopeptidase
B0909_02240	COG0534	Mate efflux family protein
B0909_02245	COG0505	Belongs to the CarA family
B0909_02255	COG0358	DNA primase activity
B0909_02260	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
B0909_02280	COG0432	Pfam Uncharacterised protein family UPF0047
B0909_02290	COG2968	Membrane
B0909_02330	COG0477	Major facilitator Superfamily
B0909_02350	COG3842	ATPase activity
B0909_02375	COG1737	Transcriptional regulator
B0909_02385	COG0531	amino acid
B0909_02390	COG0174	glutamine synthetase
B0909_02395	COG1012	belongs to the aldehyde dehydrogenase family
B0909_02420	COG2814	Major facilitator Superfamily
B0909_02425	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_02440	COG0251	oxidation-reduction process
B0909_02455	COG1804	L-carnitine dehydratase bile acid-inducible protein F
B0909_02460	COG2267	carboxylic ester hydrolase activity
B0909_02490	COG4106	trans-aconitate 2-methyltransferase activity
B0909_02515	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
B0909_02520	COG3023	N-Acetylmuramoyl-L-alanine amidase
B0909_02555	COG2001	Belongs to the MraZ family
B0909_02560	COG0275	rRNA processing
B0909_02575	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
B0909_02585	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
B0909_02590	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
B0909_02600	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
B0909_02605	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
B0909_02610	COG0812	UDP-N-acetylmuramate dehydrogenase activity
B0909_02615	COG3300	MHYT domain
B0909_02615	COG5001	Diguanylate cyclase
B0909_02620	COG0477	Major facilitator Superfamily
B0909_02625	COG1181	Belongs to the D-alanine--D-alanine ligase family
B0909_02630	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
B0909_02635	COG0849	cell division
B0909_02640	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
B0909_02650	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
B0909_02655	COG0497	DNA recombination
B0909_02660	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
B0909_02670	COG1247	-acetyltransferase
B0909_02675	COG0697	spore germination
B0909_02680	COG0583	DNA-binding transcription factor activity
B0909_02685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
B0909_02695	COG0835	chemotaxis
B0909_02705	COG1999	signal sequence binding
B0909_02710	COG2264	protein methyltransferase activity
B0909_02740	COG1335	isochorismatase
B0909_02780	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
B0909_02785	COG0277	FAD linked oxidase domain protein
B0909_02825	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
B0909_02835	COG0330	HflC and HflK could
B0909_02840	COG0330	HflC and HflK could
B0909_02850	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_02860	COG0560	Phosphoserine phosphatase
B0909_02860	COG3830	Belongs to the UPF0237 family
B0909_02865	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
B0909_02875	COG0028	Belongs to the TPP enzyme family
B0909_02880	COG0440	acetolactate synthase activity
B0909_02895	COG0656	L-ascorbic acid biosynthetic process
B0909_02935	COG1090	epimerase
B0909_02940	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
B0909_02950	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
B0909_02955	COG1252	NADH dehydrogenase
B0909_02960	COG1064	alcohol dehydrogenase
B0909_02965	COG2207	Transcriptional regulator
B0909_02975	COG1733	regulation of RNA biosynthetic process
B0909_02985	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
B0909_02995	COG4154	Belongs to the RbsD FucU family
B0909_03000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
B0909_03005	COG1840	ABC-type Fe3 transport system, periplasmic component
B0909_03010	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
B0909_03040	COG0484	heat shock protein binding
B0909_03060	COG2382	esterase
B0909_03070	COG0556	nucleotide-excision repair
B0909_03085	COG1733	regulation of RNA biosynthetic process
B0909_03090	COG2910	NAD(P)H-binding
B0909_03115	COG1607	acyl-coa hydrolase
B0909_03120	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
B0909_03145	COG1132	(ABC) transporter
B0909_03180	COG0861	Integral membrane protein TerC family
B0909_03185	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
B0909_03210	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
B0909_03215	COG0081	regulation of translation
B0909_03220	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
B0909_03225	COG0222	ribosome binding
B0909_03230	COG0085	RNA polymerase activity
B0909_03235	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
B0909_03255	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
B0909_03260	COG0049	tRNA binding
B0909_03265	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
B0909_03270	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
B0909_03275	COG0051	transcription antitermination factor activity, RNA binding
B0909_03280	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
B0909_03285	COG0088	Forms part of the polypeptide exit tunnel
B0909_03290	COG0089	rRNA binding
B0909_03295	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
B0909_03300	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
B0909_03305	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
B0909_03310	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
B0909_03315	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
B0909_03320	COG0255	Belongs to the universal ribosomal protein uL29 family
B0909_03325	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
B0909_03330	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
B0909_03335	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
B0909_03340	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
B0909_03345	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
B0909_03350	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
B0909_03355	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
B0909_03360	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
B0909_03365	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
B0909_03370	COG1841	ribosomal large subunit assembly
B0909_03375	COG0200	Binds to the 23S rRNA
B0909_03380	COG0201	protein transport
B0909_03385	COG0563	adenylate kinase activity
B0909_03390	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
B0909_03395	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
B0909_03400	COG0202	RNA polymerase activity
B0909_03405	COG0203	ribosomal protein L17
B0909_03415	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
B0909_03420	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
B0909_03425	COG0129	dihydroxy-acid dehydratase activity
B0909_03450	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
B0909_03455	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
B0909_03465	COG0840	transmembrane signaling receptor activity
B0909_03465	COG0840	transmembrane signaling receptor activity
B0909_03485	COG1131	(ABC) transporter
B0909_03490	COG0842	Transport permease protein
B0909_03500	COG2390	Transcriptional regulator
B0909_03505	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
B0909_03510	COG3958	Transketolase
B0909_03515	COG3959	Transketolase, thiamine diphosphate binding domain
B0909_03520	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_03525	COG1879	ABC-type sugar transport system periplasmic component
B0909_03530	COG1129	ABC transporter
B0909_03535	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_03540	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
B0909_03555	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
B0909_03560	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
B0909_03565	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
B0909_03570	COG2205	protein histidine kinase activity
B0909_03570	COG2202	Pas domain
B0909_03580	COG1573	uracil-dna glycosylase
B0909_03585	COG1522	sequence-specific DNA binding
B0909_03590	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
B0909_03600	COG5425	PFAM Usg family protein
B0909_03610	COG4215	(ABC) transporter
B0909_03615	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_03625	COG2313	pseudouridylate synthase activity
B0909_03630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_03635	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
B0909_03640	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
B0909_03665	COG0538	isocitrate dehydrogenase activity
B0909_03675	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
B0909_03680	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
B0909_03695	COG1280	lysine exporter protein (LysE YggA)
B0909_03710	COG0861	Integral membrane protein TerC family
B0909_03715	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
B0909_03720	COG2066	Belongs to the glutaminase family
B0909_03725	COG0037	tRNA processing
B0909_03730	COG0483	inositol monophosphate 1-phosphatase activity
B0909_03735	COG0483	inositol monophosphate 1-phosphatase activity
B0909_03740	COG2814	Major facilitator Superfamily
B0909_03745	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
B0909_03765	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
B0909_03770	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
B0909_03785	COG0047	phosphoribosylformylglycinamidine synthase activity
B0909_03790	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
B0909_03795	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
B0909_03805	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
B0909_03830	COG0513	Belongs to the DEAD box helicase family
B0909_03835	COG0739	heme binding
B0909_03840	COG2833	Protein of unknown function (DUF455)
B0909_03845	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
B0909_03855	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
B0909_03860	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
B0909_03865	COG2945	thiolester hydrolase activity
B0909_03870	COG1104	cysteine desulfurase activity
B0909_03875	COG0719	Fe-S assembly protein
B0909_03885	COG0396	ATPase activity
B0909_03890	COG0719	Fe-S assembly protein
B0909_03895	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
B0909_03900	COG2151	metal-sulfur cluster biosynthetic enzyme
B0909_03925	COG0577	efflux transmembrane transporter activity
B0909_03925	COG1136	(ABC) transporter
B0909_03930	COG1136	(ABC) transporter
B0909_03930	COG0577	efflux transmembrane transporter activity
B0909_03990	COG1278	Cold shock
B0909_04015	COG0583	DNA-binding transcription factor activity
B0909_04020	COG4221	oxidoreductase activity
B0909_04035	COG0785	Cytochrome C biogenesis protein
B0909_04040	COG0679	Auxin Efflux Carrier
B0909_04045	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
B0909_04050	COG1183	phosphatidylcholine synthase activity
B0909_04055	COG1129	ABC transporter
B0909_04075	COG2186	Transcriptional regulator
B0909_04080	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
B0909_04085	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
B0909_04115	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
B0909_04125	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
B0909_04140	COG0697	spore germination
B0909_04170	COG0174	glutamine synthetase
B0909_04175	COG0347	Belongs to the P(II) protein family
B0909_04180	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
B0909_04180	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
B0909_04195	COG0583	DNA-binding transcription factor activity
B0909_04230	COG1760	l-serine dehydratase
B0909_04265	COG0517	IMP dehydrogenase activity
B0909_04265	COG0516	GMP reductase activity
B0909_04275	COG1752	Esterase of the alpha-beta hydrolase superfamily
B0909_04280	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
B0909_04285	COG0302	gtp cyclohydrolase
B0909_04295	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
B0909_04305	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
B0909_04340	COG0628	permease
B0909_04345	COG1132	(ABC) transporter
B0909_04360	COG1914	H( )-stimulated, divalent metal cation uptake system
B0909_04380	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
B0909_04385	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
B0909_04390	COG0589	response to stress
B0909_04395	COG1058	Belongs to the CinA family
B0909_04395	COG1546	Belongs to the CinA family
B0909_04400	COG0655	NAD(P)H dehydrogenase (quinone) activity
B0909_04430	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
B0909_04440	COG0525	valine-tRNA ligase activity
B0909_04465	COG0316	Belongs to the HesB IscA family
B0909_04470	COG0232	Belongs to the dGTPase family. Type 2 subfamily
B0909_04475	COG0018	arginyl-trna synthetase
B0909_04485	COG1472	Belongs to the glycosyl hydrolase 3 family
B0909_04490	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
B0909_04495	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
B0909_04500	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
B0909_04505	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
B0909_04510	COG0805	protein transport
B0909_04515	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
B0909_04520	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
B0909_04525	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
B0909_04530	COG0739	heme binding
B0909_04535	COG1763	Mo-molybdopterin cofactor biosynthetic process
B0909_04540	COG0746	molybdenum cofactor guanylyltransferase activity
B0909_04545	COG2814	Major facilitator Superfamily
B0909_04550	COG0697	spore germination
B0909_04555	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
B0909_04565	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
B0909_04565	COG0475	glutathione-regulated potassium exporter activity
B0909_04575	COG3706	GGDEF domain
B0909_04580	COG0303	'Molybdopterin
B0909_04585	COG0315	cyclic pyranopterin monophosphate synthase activity
B0909_04590	COG0134	indole-3-glycerol-phosphate synthase activity
B0909_04595	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
B0909_04620	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
B0909_04625	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
B0909_04630	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
B0909_04635	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
B0909_04640	COG0343	queuine tRNA-ribosyltransferase activity
B0909_04645	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
B0909_04645	COG0512	Glutamine amidotransferase of anthranilate synthase
B0909_04670	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
B0909_04690	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
B0909_04715	COG0544	peptidyl-prolyl cis-trans isomerase activity
B0909_04740	COG1368	sulfuric ester hydrolase activity
B0909_04755	COG0823	Involved in the tonB-independent uptake of proteins
B0909_04760	COG0778	Nitroreductase
B0909_04770	COG0281	malic enzyme
B0909_04770	COG0280	phosphate acetyltransferase
B0909_04780	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_04785	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
B0909_04790	COG1127	ABC transporter
B0909_04855	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
B0909_04855	COG3264	Mechanosensitive ion channel
B0909_04870	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
B0909_04875	COG0640	Transcriptional regulator
B0909_04885	COG0740	serine-type endopeptidase activity
B0909_04895	COG0187	DNA topoisomerase II activity
B0909_04905	COG0149	triose-phosphate isomerase activity
B0909_04915	COG0504	CTP synthase activity
B0909_04925	COG0114	fumarate hydratase activity
B0909_04935	COG0546	phosphoglycolate phosphatase activity
B0909_04940	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
B0909_04955	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
B0909_04970	COG2003	Belongs to the UPF0758 family
B0909_04975	COG0024	Methionine aminopeptidase
B0909_04980	COG1489	DNA binding
B0909_04985	COG3243	poly(R)-hydroxyalkanoic acid synthase
B0909_05000	COG0635	Involved in the biosynthesis of porphyrin-containing compound
B0909_05005	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
B0909_05010	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
B0909_05020	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
B0909_05050	COG0436	Aminotransferase
B0909_05065	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
B0909_05080	COG1126	abc transporter atp-binding protein
B0909_05085	COG0765	amino acid transport
B0909_05090	COG4597	amino acid ABC transporter
B0909_05095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_05100	COG0626	cystathionine gamma-synthase activity
B0909_05105	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
B0909_05125	COG3772	lysozyme
B0909_05300	COG2124	cytochrome p450
B0909_05350	COG1064	alcohol dehydrogenase
B0909_05355	COG0321	lipoyl(octanoyl) transferase activity
B0909_05480	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
B0909_05785	COG2205	protein histidine kinase activity
B0909_05785	COG2202	Pas domain
B0909_05800	COG0242	peptide deformylase activity
B0909_05810	COG0243	molybdopterin cofactor binding
B0909_05815	COG2239	Acts as a magnesium transporter
B0909_05895	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
B0909_05905	COG0667	Aldo Keto reductase
B0909_05915	COG1609	Transcriptional regulator
B0909_05920	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
B0909_05925	COG1121	(ABC) transporter
B0909_05930	COG1108	ABC-type Mn2 Zn2 transport systems permease components
B0909_05945	COG0179	Fumarylacetoacetate (FAA) hydrolase
B0909_05950	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
B0909_05965	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
B0909_05970	COG0629	single-stranded DNA binding
B0909_05985	COG2095	MarC family integral membrane protein
B0909_05990	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
B0909_06045	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
B0909_06055	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
B0909_06060	COG0084	hydrolase, TatD family'
B0909_06065	COG0321	lipoyl(octanoyl) transferase activity
B0909_06065	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
B0909_06080	COG0583	DNA-binding transcription factor activity
B0909_06095	COG0601	transmembrane transport
B0909_06105	COG2226	methyltransferase
B0909_06125	COG1280	lysine exporter protein (LysE YggA)
B0909_06130	COG0625	glutathione transferase activity
B0909_06135	COG0477	Major facilitator Superfamily
B0909_06145	COG0450	alkyl hydroperoxide reductase
B0909_06160	COG1671	Belongs to the UPF0178 family
B0909_06170	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
B0909_06175	COG0251	oxidation-reduction process
B0909_06200	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
B0909_06230	COG0404	The glycine cleavage system catalyzes the degradation of glycine
B0909_06235	COG0509	glycine decarboxylation via glycine cleavage system
B0909_06240	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
B0909_06240	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
B0909_06275	COG1648	precorrin-2 dehydrogenase activity
B0909_06275	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
B0909_06290	COG3956	TIGRFAM MazG family protein
B0909_06295	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
B0909_06300	COG1923	regulation of RNA biosynthetic process
B0909_06305	COG0569	domain protein
B0909_06310	COG2204	response regulator
B0909_06315	COG5000	phosphorelay sensor kinase activity
B0909_06320	COG2204	response regulator
B0909_06325	COG3852	Histidine kinase
B0909_06335	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
B0909_06335	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
B0909_06340	COG1546	Belongs to the CinA family
B0909_06345	COG2867	negative regulation of translational initiation
B0909_06365	COG0697	spore germination
B0909_06370	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
B0909_06380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
B0909_06390	COG0508	dehydrogenase complex catalyzes the overall conversion of
B0909_06395	COG0022	dehydrogenase e1 component
B0909_06395	COG0508	dehydrogenase complex catalyzes the overall conversion of
B0909_06400	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
B0909_06410	COG0148	phosphopyruvate hydratase activity
B0909_06415	COG2877	3-deoxy-8-phosphooctulonate synthase activity
B0909_06425	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
B0909_06440	COG0372	Belongs to the citrate synthase family
B0909_06450	COG0765	amino acid transport
B0909_06455	COG0765	amino acid transport
B0909_06465	COG2186	Transcriptional regulator
B0909_06470	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
B0909_06475	COG3494	Protein of unknown function (DUF1009)
B0909_06480	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
B0909_06485	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
B0909_06490	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
B0909_06495	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
B0909_06500	COG0750	zinc metalloprotease
B0909_06505	COG0575	Belongs to the CDS family
B0909_06510	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
B0909_06515	COG0233	cytoplasmic translational termination
B0909_06520	COG0528	UMP kinase activity
B0909_06525	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
B0909_06530	COG0052	Belongs to the universal ribosomal protein uS2 family
B0909_06555	COG0537	adenosine 5'-monophosphoramidase activity
B0909_06590	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
B0909_06605	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
B0909_06615	COG3106	COG3106 Predicted ATPase
B0909_06620	COG3768	UPF0283 membrane protein
B0909_06630	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
B0909_06635	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
B0909_06650	COG0633	Ferredoxin
B0909_06665	COG0384	phenazine biosynthesis protein PhzF
B0909_06670	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
B0909_06690	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
B0909_06705	COG1530	ribonuclease E activity
B0909_06710	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_06730	COG0436	Aminotransferase
B0909_06740	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
B0909_06745	COG0511	ligase activity, forming carbon-carbon bonds
B0909_06750	COG0439	Biotin carboxylase
B0909_06755	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
B0909_06770	COG0456	acetyltransferase
B0909_06780	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
B0909_06795	COG3811	Belongs to the UPF0386 family
B0909_06800	COG0456	acetyltransferase
B0909_06805	COG0154	amidase activity
B0909_06810	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
B0909_06815	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
B0909_06820	COG2824	Alkylphosphonate utilization operon protein PhnA
B0909_06825	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
B0909_06850	COG0456	acetyltransferase
B0909_06855	COG1960	acyl-CoA dehydrogenase activity
B0909_06865	COG0540	Belongs to the ATCase OTCase family
B0909_06875	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
B0909_06880	COG0758	DNA mediated transformation
B0909_06890	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
B0909_06895	COG0557	exoribonuclease II activity
B0909_06910	COG0477	Major facilitator Superfamily
B0909_06915	COG0267	Belongs to the bacterial ribosomal protein bL33 family
B0909_06920	COG0745	RESPONSE REGULATOR receiver
B0909_06920	COG3706	GGDEF domain
B0909_06925	COG0784	Response regulator, receiver
B0909_06935	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
B0909_06945	COG0587	DNA-directed DNA polymerase activity
B0909_06955	COG1136	(ABC) transporter
B0909_06965	COG0442	prolyl-tRNA aminoacylation
B0909_06990	COG1007	ATP synthesis coupled electron transport
B0909_07005	COG0713	ATP synthesis coupled electron transport
B0909_07015	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
B0909_07020	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
B0909_07030	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
B0909_07035	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
B0909_07045	COG0649	NAD binding
B0909_07055	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
B0909_07060	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
B0909_07065	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
B0909_07085	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
B0909_07095	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
B0909_07110	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
B0909_07115	COG0740	serine-type endopeptidase activity
B0909_07120	COG2199	diguanylate cyclase activity
B0909_07125	COG2124	cytochrome p450
B0909_07145	COG1832	CoA-binding protein
B0909_07155	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
B0909_07160	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B0909_07165	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
B0909_07170	COG1396	sequence-specific DNA binding
B0909_07175	COG0010	Belongs to the arginase family
B0909_07180	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
B0909_07190	COG1612	heme a metabolic process
B0909_07260	COG1238	metal cluster binding
B0909_07265	COG3932	Exopolysaccharide synthesis, ExoD
B0909_07295	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
B0909_07305	COG0415	Belongs to the DNA photolyase family
B0909_07320	COG2897	thiosulfate sulfurtransferase activity
B0909_07345	COG0737	Belongs to the 5'-nucleotidase family
B0909_07360	COG0583	DNA-binding transcription factor activity
B0909_07365	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
B0909_07370	COG0745	RESPONSE REGULATOR receiver
B0909_07370	COG3706	GGDEF domain
B0909_07380	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
B0909_07385	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
B0909_07400	COG4608	Belongs to the ABC transporter superfamily
B0909_07405	COG0444	Belongs to the ABC transporter superfamily
B0909_07410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_07415	COG0601	transmembrane transport
B0909_07450	COG0776	regulation of translation
B0909_07455	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
B0909_07460	COG0416	fatty acid biosynthetic process
B0909_07480	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
B0909_07485	COG2814	Major facilitator Superfamily
B0909_07490	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
B0909_07495	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
B0909_07500	COG1280	lysine exporter protein (LysE YggA)
B0909_07515	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
B0909_07515	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
B0909_07520	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
B0909_07525	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
B0909_07550	COG0113	porphobilinogen synthase activity
B0909_07560	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
B0909_07565	COG2336	PFAM SpoVT AbrB
B0909_07570	COG3654	unkown
B0909_07575	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
B0909_07585	COG0659	secondary active sulfate transmembrane transporter activity
B0909_07590	COG0840	transmembrane signaling receptor activity
B0909_07595	COG4452	Inner membrane protein CreD
B0909_07600	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
B0909_07605	COG0477	Major facilitator Superfamily
B0909_07610	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
B0909_07620	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
B0909_07645	COG0248	Ppx GppA phosphatase
B0909_07650	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
B0909_07660	COG0628	permease
B0909_07670	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
B0909_07675	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
B0909_07695	COG0243	molybdopterin cofactor binding
B0909_07700	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
B0909_07715	COG0625	glutathione transferase activity
B0909_07725	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_07730	COG0322	excinuclease ABC activity
B0909_07735	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
B0909_07745	COG0314	molybdopterin synthase activity
B0909_07765	COG0105	UTP biosynthetic process
B0909_07775	COG3706	GGDEF domain
B0909_07780	COG0488	(ABC) transporter
B0909_07790	COG4566	intracellular signal transduction
B0909_07795	COG4191	Histidine kinase
B0909_07800	COG5001	Diguanylate cyclase
B0909_07820	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
B0909_07835	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
B0909_07845	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
B0909_07850	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
B0909_07855	COG0400	carboxylic ester hydrolase activity
B0909_07860	COG0194	GDP metabolic process
B0909_07865	COG1561	YicC-like family, N-terminal region
B0909_07870	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
B0909_07875	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
B0909_07880	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
B0909_07890	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
B0909_07895	COG0667	Aldo Keto reductase
B0909_07905	COG0360	Binds together with S18 to 16S ribosomal RNA
B0909_07910	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
B0909_07920	COG0359	binds to the 23S rRNA
B0909_07940	COG0305	Participates in initiation and elongation during chromosome replication
B0909_07945	COG5265	(ABC) transporter
B0909_07955	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
B0909_07965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
B0909_07985	COG1286	toxin biosynthetic process
B0909_07990	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
B0909_07995	COG4221	oxidoreductase activity
B0909_08015	COG0215	cysteine-tRNA ligase activity
B0909_08020	COG2852	Protein conserved in bacteria
B0909_08065	COG5265	(ABC) transporter
B0909_08070	COG0688	phosphatidylethanolamine metabolic process
B0909_08075	COG1183	phosphatidylcholine synthase activity
B0909_08080	COG0745	RESPONSE REGULATOR receiver
B0909_08080	COG3706	GGDEF domain
B0909_08090	COG1742	UPF0060 membrane protein
B0909_08120	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
B0909_08130	COG0668	transmembrane transport
B0909_08135	COG3443	Belongs to the bacterial solute-binding protein 9 family
B0909_08140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_08145	COG1116	anion transmembrane transporter activity
B0909_08155	COG0346	lactoylglutathione lyase activity
B0909_08165	COG1418	mRNA catabolic process
B0909_08175	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
B0909_08185	COG1381	Involved in DNA repair and RecF pathway recombination
B0909_08190	COG0784	Response regulator, receiver
B0909_08195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
B0909_08200	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
B0909_08205	COG0571	ribonuclease III activity
B0909_08210	COG0681	Belongs to the peptidase S26 family
B0909_08215	COG0736	holo-[acyl-carrier-protein] synthase activity
B0909_08240	COG1758	RNA polymerase activity
B0909_08250	COG0840	transmembrane signaling receptor activity
B0909_08255	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
B0909_08260	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_08270	COG0741	lytic transglycosylase activity
B0909_08275	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
B0909_08320	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
B0909_08345	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
B0909_08370	COG2814	Major facilitator Superfamily
B0909_08375	COG2239	Acts as a magnesium transporter
B0909_08380	COG1968	undecaprenyl-diphosphatase activity
B0909_08390	COG1733	regulation of RNA biosynthetic process
B0909_08420	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
B0909_08440	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_08445	COG3447	MASE1 domain protein
B0909_08445	COG5001	Diguanylate cyclase
B0909_08445	COG5002	protein histidine kinase activity
B0909_08450	COG0443	Heat shock 70 kDa protein
B0909_08465	COG0697	spore germination
B0909_08470	COG0308	aminopeptidase N
B0909_08480	COG2202	Pas domain
B0909_08480	COG2205	protein histidine kinase activity
B0909_08485	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
B0909_08490	COG3713	MltA-interacting MipA family protein
B0909_08495	COG3011	Protein conserved in bacteria
B0909_08510	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
B0909_08515	COG3088	subunit of a heme lyase
B0909_08520	COG1138	Cytochrome C-type biogenesis protein
B0909_08525	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
B0909_08530	COG4235	cytochrome complex assembly
B0909_08540	COG2205	protein histidine kinase activity
B0909_08545	COG0745	RESPONSE REGULATOR receiver
B0909_08645	COG4695	Portal protein
B0909_08685	COG0110	maltose O-acetyltransferase activity
B0909_08705	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
B0909_08710	COG1621	beta-fructofuranosidase activity
B0909_08720	COG2814	Major facilitator Superfamily
B0909_08760	COG3077	Addiction module antitoxin, RelB DinJ family
B0909_08775	COG2983	Belongs to the UPF0260 family
B0909_08780	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
B0909_08800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
B0909_08840	COG2205	protein histidine kinase activity
B0909_08850	COG2166	iron-sulfur cluster assembly
B0909_08865	COG4957	zinc ion binding
B0909_08870	COG1320	monovalent cation:proton antiporter activity
B0909_08875	COG2212	antiporter activity
B0909_08880	COG1863	multisubunit Na H antiporter MnhE subunit
B0909_08890	COG1006	Multisubunit Na H antiporter MnhC subunit
B0909_08895	COG2111	Na H antiporter
B0909_08905	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
B0909_08915	COG1272	protein, Hemolysin III
B0909_08920	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
B0909_08935	COG2514	catechol 2,3-dioxygenase activity
B0909_08950	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
B0909_08950	COG2169	Transcriptional regulator
B0909_08960	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_08985	COG4176	ABC-type proline glycine betaine transport system permease component
B0909_08990	COG0517	IMP dehydrogenase activity
B0909_08990	COG4175	Glycine betaine
B0909_09015	COG0789	Transcriptional regulator
B0909_09050	COG2010	Cytochrome c
B0909_09055	COG3909	cytochrome
B0909_09075	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
B0909_09095	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
B0909_09100	COG4106	trans-aconitate 2-methyltransferase activity
B0909_09110	COG2378	regulation of single-species biofilm formation
B0909_09115	COG3781	membrane
B0909_09120	COG0656	L-ascorbic acid biosynthetic process
B0909_09140	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
B0909_09145	COG1733	regulation of RNA biosynthetic process
B0909_09160	COG0433	COG0433 Predicted ATPase
B0909_09180	COG0488	(ABC) transporter
B0909_09220	COG1764	response to oxidative stress
B0909_09225	COG1846	Transcriptional regulator
B0909_09230	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_09235	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_09250	COG1793	dna ligase
B0909_09270	COG0477	Major facilitator Superfamily
B0909_09315	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
B0909_09320	COG1012	belongs to the aldehyde dehydrogenase family
B0909_09325	COG1309	transcriptional regulator
B0909_09340	COG2199	diguanylate cyclase activity
B0909_09340	COG2203	Gaf domain
B0909_09340	COG2200	EAL domain
B0909_09355	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
B0909_09360	COG4208	sulfate ABC transporter
B0909_09365	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
B0909_09370	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
B0909_09375	COG1959	2 iron, 2 sulfur cluster binding
B0909_09380	COG0175	sulfate reduction
B0909_09385	COG0175	sulfate reduction
B0909_09390	COG2895	sulfate adenylyltransferase (ATP) activity
B0909_09410	COG0579	oxidoreductase
B0909_09450	COG0574	Belongs to the PEP-utilizing enzyme family
B0909_09450	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
B0909_09455	COG2514	catechol 2,3-dioxygenase activity
B0909_09460	COG1196	nuclear chromosome segregation
B0909_09465	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
B0909_09490	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
B0909_09505	COG2189	Belongs to the N(4) N(6)-methyltransferase family
B0909_09525	COG1802	Transcriptional regulator
B0909_09530	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
B0909_09545	COG0612	Peptidase, M16
B0909_09550	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
B0909_09555	COG3300	MHYT domain
B0909_09555	COG5001	Diguanylate cyclase
B0909_09565	COG3237	CsbD-like
B0909_09570	COG1678	Uncharacterized ACR, COG1678
B0909_09580	COG0678	peroxiredoxin activity
B0909_09580	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
B0909_09590	COG0328	RNA-DNA hybrid ribonuclease activity
B0909_09595	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
B0909_09600	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
B0909_09605	COG3346	SURF1 family
B0909_09620	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
B0909_09630	COG0109	protoheme IX farnesyltransferase activity
B0909_09635	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
B0909_09650	COG0312	modulator of DNA gyrase
B0909_09660	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
B0909_09680	COG0259	pyridoxamine-phosphate oxidase activity
B0909_09695	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
B0909_09710	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
B0909_09720	COG3214	Protein conserved in bacteria
B0909_09725	COG1122	ATPase activity
B0909_09730	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
B0909_09735	COG1268	BioY protein
B0909_09740	COG0123	including yeast histone deacetylase and acetoin utilization protein
B0909_09745	COG1722	exodeoxyribonuclease VII activity
B0909_09750	COG1741	Belongs to the pirin family
B0909_09755	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
B0909_09785	COG1522	sequence-specific DNA binding
B0909_09795	COG2972	Histidine kinase
B0909_09795	COG0840	transmembrane signaling receptor activity
B0909_09805	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
B0909_09820	COG1960	acyl-CoA dehydrogenase activity
B0909_09845	COG4638	Rieske (2fe-2S)
B0909_09855	COG0009	L-threonylcarbamoyladenylate synthase
B0909_09880	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
B0909_09885	COG0789	Transcriptional regulator
B0909_09895	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
B0909_09900	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
B0909_09910	COG0356	it plays a direct role in the translocation of protons across the membrane
B0909_09925	COG3158	transport of potassium into the cell
B0909_09930	COG0598	Magnesium transport protein CorA
B0909_09940	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
B0909_09945	COG2197	response regulator
B0909_09955	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_09960	COG3734	2-keto-3-deoxy-galactonokinase
B0909_09965	COG0800	Aldolase
B0909_09970	COG3386	PFAM SMP-30 Gluconolaconase
B0909_09975	COG3300	MHYT domain
B0909_09975	COG5001	Diguanylate cyclase
B0909_09985	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
B0909_09995	COG1663	tetraacyldisaccharide 4'-kinase activity
B0909_10005	COG1519	Transferase
B0909_10015	COG0483	inositol monophosphate 1-phosphatase activity
B0909_10020	COG0312	modulator of DNA gyrase
B0909_10030	COG1752	Esterase of the alpha-beta hydrolase superfamily
B0909_10035	COG0742	ribosomal rna small subunit methyltransferase
B0909_10040	COG1187	pseudouridine synthase activity
B0909_10045	COG0590	tRNA wobble adenosine to inosine editing
B0909_10055	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
B0909_10060	COG0196	riboflavin kinase activity
B0909_10070	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
B0909_10075	COG0459	protein refolding
B0909_10090	COG2259	Doxx family
B0909_10095	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
B0909_10100	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
B0909_10110	COG0124	histidyl-tRNA synthetase
B0909_10140	COG0583	DNA-binding transcription factor activity
B0909_10145	COG2855	membrane
B0909_10155	COG2818	Glycosylase
B0909_10160	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_10170	COG0247	lactate metabolic process
B0909_10175	COG0277	FAD linked oxidase domain protein
B0909_10185	COG0277	FAD linked oxidase domain protein
B0909_10190	COG0583	DNA-binding transcription factor activity
B0909_10200	COG2186	Transcriptional regulator
B0909_10205	COG0438	transferase activity, transferring glycosyl groups
B0909_10210	COG0561	phosphatase activity
B0909_10220	COG0306	phosphate transporter
B0909_10240	COG0583	DNA-binding transcription factor activity
B0909_10255	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
B0909_10265	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
B0909_10270	COG2183	response to ionizing radiation
B0909_10275	COG0151	Belongs to the GarS family
B0909_10285	COG0840	transmembrane signaling receptor activity
B0909_10300	COG0751	glycine-tRNA ligase activity
B0909_10310	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
B0909_10315	COG1704	LemA family
B0909_10320	COG0752	glycyl-tRNA synthetase alpha subunit
B0909_10325	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
B0909_10350	COG0142	geranyltranstransferase activity
B0909_10360	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
B0909_10365	COG0521	Mo-molybdopterin cofactor biosynthetic process
B0909_10400	COG0477	Major facilitator Superfamily
B0909_10405	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
B0909_10410	COG0248	Ppx GppA phosphatase
B0909_10430	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
B0909_10550	COG2205	protein histidine kinase activity
B0909_10560	COG1177	transmembrane transport
B0909_10565	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_10570	COG3842	ATPase activity
B0909_10585	COG2224	Isocitrate lyase
B0909_10610	COG2081	HI0933 family
B0909_10620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_10625	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
B0909_10630	COG0363	glucosamine-6-phosphate deaminase activity
B0909_10635	COG0129	dihydroxy-acid dehydratase activity
B0909_10650	COG3842	ATPase activity
B0909_10655	COG0366	Alpha amylase catalytic
B0909_10660	COG0395	ABC-type sugar transport system, permease component
B0909_10665	COG1175	transmembrane transport
B0909_10670	COG1653	transport
B0909_10675	COG1609	Transcriptional regulator
B0909_10680	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
B0909_10720	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
B0909_10730	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
B0909_10735	COG5443	negative regulation of bacterial-type flagellum assembly
B0909_10755	COG1749	Flagellar hook protein flgE
B0909_10780	COG1360	Flagellar Motor Protein
B0909_10790	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
B0909_10805	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
B0909_10810	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
B0909_10815	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
B0909_10820	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
B0909_10825	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
B0909_10835	COG4786	Flagellar basal body rod
B0909_10840	COG1157	protein secretion by the type III secretion system
B0909_10850	COG1280	lysine exporter protein (LysE YggA)
B0909_10855	COG1815	bacterial-type flagellum-dependent cell motility
B0909_10860	COG1558	bacterial-type flagellum-dependent cell motility
B0909_10865	COG1677	Flagellar hook-basal body complex protein FliE
B0909_10870	COG4786	Flagellar basal body rod
B0909_10875	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
B0909_10880	COG1706	bacterial-type flagellum-dependent cell motility
B0909_10890	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
B0909_10900	COG1338	Plays a role in the flagellum-specific transport system
B0909_10940	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
B0909_10950	COG1881	PFAM PEBP family protein
B0909_10960	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
B0909_10965	COG5328	Belongs to the UPF0262 family
B0909_10975	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
B0909_10980	COG0424	maF-like protein
B0909_10985	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
B0909_11000	COG0436	Aminotransferase
B0909_11005	COG1970	mechanosensitive ion channel activity
B0909_11010	COG0784	Response regulator, receiver
B0909_11010	COG2198	Histidine kinase
B0909_11010	COG2205	protein histidine kinase activity
B0909_11015	COG0840	transmembrane signaling receptor activity
B0909_11015	COG2972	Histidine kinase
B0909_11025	COG2771	luxR family
B0909_11030	COG1766	The M ring may be actively involved in energy transduction
B0909_11040	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
B0909_11045	COG0745	RESPONSE REGULATOR receiver
B0909_11050	COG2201	protein-glutamate methylesterase activity
B0909_11055	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
B0909_11060	COG0643	Histidine kinase
B0909_11060	COG2198	Histidine kinase
B0909_11075	COG0840	transmembrane signaling receptor activity
B0909_11085	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
B0909_11085	COG2111	Na H antiporter
B0909_11090	COG1006	Multisubunit Na H antiporter MnhC subunit
B0909_11095	COG0651	ATP synthesis coupled electron transport
B0909_11100	COG1863	multisubunit Na H antiporter MnhE subunit
B0909_11105	COG2212	antiporter activity
B0909_11110	COG1320	monovalent cation:proton antiporter activity
B0909_11140	COG1250	3-hydroxyacyl-CoA dehydrogenase
B0909_11140	COG1024	Enoyl-CoA hydratase
B0909_11145	COG0183	Belongs to the thiolase family
B0909_11150	COG1960	acyl-CoA dehydrogenase activity
B0909_11185	COG1201	RNA secondary structure unwinding
B0909_11190	COG1959	2 iron, 2 sulfur cluster binding
B0909_11210	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
B0909_11225	COG0167	dihydroorotate dehydrogenase activity
B0909_11275	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
B0909_11285	COG0717	Belongs to the dCTP deaminase family
B0909_11295	COG2967	ApaG domain
B0909_11300	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
B0909_11305	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
B0909_11310	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
B0909_11325	COG0745	RESPONSE REGULATOR receiver
B0909_11330	COG0704	Plays a role in the regulation of phosphate uptake
B0909_11335	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
B0909_11345	COG0573	inorganic phosphate transmembrane transporter activity
B0909_11350	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
B0909_11355	COG5002	protein histidine kinase activity
B0909_11360	COG2326	polyphosphate kinase activity
B0909_11400	COG4774	siderophore transport
B0909_11405	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
B0909_11410	COG1840	ABC-type Fe3 transport system, periplasmic component
B0909_11415	COG3842	ATPase activity
B0909_11420	COG0318	PFAM AMP-dependent synthetase and ligase
B0909_11425	COG0166	Belongs to the GPI family
B0909_11430	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
B0909_11450	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
B0909_11455	COG0418	dihydroorotase activity
B0909_11460	COG3938	Belongs to the proline racemase family
B0909_11470	COG0427	acetyl-CoA hydrolase
B0909_11485	COG0395	ABC-type sugar transport system, permease component
B0909_11490	COG1175	transmembrane transport
B0909_11495	COG3842	ATPase activity
B0909_11500	COG2226	methyltransferase
B0909_11540	COG0230	Belongs to the bacterial ribosomal protein bL34 family
B0909_11545	COG0594	ribonuclease P activity
B0909_11550	COG0706	membrane insertase activity
B0909_11555	COG0218	Necessary for normal cell division and for the maintenance of normal septation
B0909_11565	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
B0909_11590	COG0071	Belongs to the small heat shock protein (HSP20) family
B0909_11600	COG2972	Histidine kinase
B0909_11600	COG0840	transmembrane signaling receptor activity
B0909_11610	COG2171	N-acyltransferase activity
B0909_11615	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
B0909_11625	COG1393	Belongs to the ArsC family
B0909_11630	COG0101	tRNA pseudouridine synthase activity
B0909_11635	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
B0909_11640	COG0242	peptide deformylase activity
B0909_11650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_11655	COG0220	tRNA (guanine-N7-)-methyltransferase activity
B0909_11660	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
B0909_11665	COG1396	sequence-specific DNA binding
B0909_11670	COG0815	Transfers the fatty acyl group on membrane lipoproteins
B0909_11680	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
B0909_11685	COG1702	phosphate starvation-inducible protein PhoH
B0909_11690	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
B0909_11715	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
B0909_11725	COG0180	Tryptophanyl-tRNA synthetase
B0909_11735	COG0728	peptidoglycan biosynthetic process
B0909_11740	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
B0909_11745	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
B0909_11760	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
B0909_11765	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
B0909_11770	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
B0909_11780	COG0776	regulation of translation
B0909_11785	COG0616	signal peptide processing
B0909_11795	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
B0909_11800	COG1137	ATPase activity
B0909_11810	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
B0909_11815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
B0909_11820	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
B0909_11825	COG1420	regulation of RNA biosynthetic process
B0909_11830	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
B0909_11835	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
B0909_11840	COG0635	Involved in the biosynthesis of porphyrin-containing compound
B0909_11845	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
B0909_11850	COG0268	Binds directly to 16S ribosomal RNA
B0909_11855	COG1024	Enoyl-CoA hydratase
B0909_11860	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
B0909_11865	COG2226	methyltransferase
B0909_11870	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
B0909_11885	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
B0909_11890	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
B0909_11895	COG0756	dUTP diphosphatase activity
B0909_11900	COG1280	lysine exporter protein (LysE YggA)
B0909_11905	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
B0909_11910	COG0606	chelatase, subunit chli
B0909_11915	COG0189	ligase activity
B0909_11925	COG3842	ATPase activity
B0909_11930	COG0395	ABC-type sugar transport system, permease component
B0909_11935	COG1175	transmembrane transport
B0909_11950	COG0792	nuclease activity
B0909_11955	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
B0909_11960	COG0592	DNA-directed DNA polymerase activity
B0909_11965	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
B0909_11975	COG0284	orotidine-5'-phosphate decarboxylase activity
B0909_11995	COG1968	undecaprenyl-diphosphatase activity
B0909_12005	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
B0909_12015	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
B0909_12045	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
B0909_12060	COG0518	GMP synthase (glutamine-hydrolyzing) activity
B0909_12060	COG0519	Catalyzes the synthesis of GMP from XMP
B0909_12080	COG1205	dead DEAH box helicase
B0909_12080	COG1111	helicase
B0909_12085	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
B0909_12130	COG1393	Belongs to the ArsC family
B0909_12140	COG2309	aminopeptidase activity
B0909_12145	COG0697	spore germination
B0909_12150	COG1846	Transcriptional regulator
B0909_12160	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_12165	COG1570	exodeoxyribonuclease VII activity
B0909_12190	COG4977	sequence-specific DNA binding
B0909_12210	COG0667	Aldo Keto reductase
B0909_12215	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
B0909_12215	COG0072	phenylalanine-tRNA ligase activity
B0909_12220	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
B0909_12230	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
B0909_12235	COG0291	Belongs to the bacterial ribosomal protein bL35 family
B0909_12240	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
B0909_12265	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
B0909_12270	COG2169	Transcriptional regulator
B0909_12270	COG1917	Cupin 2, conserved barrel domain protein
B0909_12285	COG1396	sequence-specific DNA binding
B0909_12300	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
B0909_12305	COG0481	GTPase activity
B0909_12335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
B0909_12340	COG0697	spore germination
B0909_12345	COG3757	hydrolase, family 25
B0909_12350	COG3422	double-strand break repair
B0909_12400	COG4964	Belongs to the GSP D family
B0909_12440	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
B0909_12450	COG0791	NLP P60 protein
B0909_12465	COG0697	spore germination
B0909_12480	COG4269	membrane
B0909_12485	COG0501	Belongs to the peptidase M48B family
B0909_12490	COG1840	ABC-type Fe3 transport system, periplasmic component
B0909_12495	COG1959	2 iron, 2 sulfur cluster binding
B0909_12505	COG1732	Glycine betaine
B0909_12510	COG1174	glycine betaine transport
B0909_12515	COG1125	glycine betaine transport
B0909_12520	COG1174	glycine betaine transport
B0909_12525	COG3265	gluconokinase activity
B0909_12530	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_12535	COG0174	glutamine synthetase
B0909_12540	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_12545	COG4172	Belongs to the ABC transporter superfamily
B0909_12550	COG4239	(ABC) transporter, permease
B0909_12555	COG4174	ABC transporter (Permease)
B0909_12560	COG4166	transmembrane transport
B0909_12565	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
B0909_12570	COG1803	Methylglyoxal synthase
B0909_12575	COG0837	glucose binding
B0909_12580	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
B0909_12585	COG2188	Transcriptional regulator
B0909_12590	COG3624	Phosphonate C-P lyase system protein PhnG
B0909_12595	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
B0909_12600	COG3626	phosphonate metabolism
B0909_12605	COG3627	carbon phosphorus lyase activity
B0909_12610	COG4107	phosphonate C-P lyase system protein PhnK
B0909_12615	COG4778	phosphonate C-P lyase system protein PhnL
B0909_12625	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
B0909_12630	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
B0909_12635	COG3639	organic phosphonate transmembrane transporter activity
B0909_12640	COG3639	organic phosphonate transmembrane transporter activity
B0909_12645	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
B0909_12650	COG3454	Phosphonate metabolism
B0909_12655	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
B0909_12670	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
B0909_12680	COG0848	biopolymer transport protein
B0909_12700	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_12735	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
B0909_12745	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
B0909_12760	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
B0909_12765	COG0069	glutamate synthase activity
B0909_12765	COG0070	glutamate synthase
B0909_12765	COG0067	glutamate synthase
B0909_12770	COG0477	Major facilitator Superfamily
B0909_12780	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
B0909_12785	COG1845	cytochrome c oxidase, subunit III
B0909_12790	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
B0909_12800	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
B0909_12805	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
B0909_12810	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
B0909_12820	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
B0909_12825	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
B0909_12830	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
B0909_12835	COG0295	cytidine deaminase activity
B0909_12860	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
B0909_12885	COG0443	Heat shock 70 kDa protein
B0909_12890	COG0484	heat shock protein binding
B0909_12900	COG2900	Belongs to the SlyX family
B0909_12935	COG0333	Belongs to the bacterial ribosomal protein bL32 family
B0909_12945	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
B0909_12945	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
B0909_12955	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
B0909_12960	COG1278	Cold shock
B0909_12970	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
B0909_12975	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
B0909_12985	COG3474	cytochrome
B0909_12990	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
B0909_12995	COG1605	Chorismate mutase
B0909_12995	COG0077	Prephenate dehydratase
B0909_13000	COG2816	NAD+ diphosphatase activity
B0909_13015	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
B0909_13020	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
B0909_13030	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
B0909_13035	COG2951	lytic endotransglycosylase activity
B0909_13040	COG2814	Major facilitator Superfamily
B0909_13045	COG0779	Required for maturation of 30S ribosomal subunits
B0909_13060	COG3064	Membrane
B0909_13060	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
B0909_13065	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
B0909_13070	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
B0909_13075	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
B0909_13080	COG1185	polyribonucleotide nucleotidyltransferase activity
B0909_13085	COG2813	Specifically methylates the guanine in position
B0909_13095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_13125	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
B0909_13145	COG1780	Probably involved in ribonucleotide reductase function
B0909_13155	COG1072	(Pantothenic acid kinase))
B0909_13180	COG0514	ATP-dependent DNA helicase (RecQ)
B0909_13320	COG0583	DNA-binding transcription factor activity
B0909_13340	COG2072	flavoprotein involved in K transport
B0909_13355	COG2130	NADP-dependent
B0909_13375	COG2801	Transposase and inactivated derivatives
B0909_13455	COG1120	ATPase activity
B0909_13460	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_13465	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_13540	COG1012	belongs to the aldehyde dehydrogenase family
B0909_13545	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
B0909_13560	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_13565	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_13570	COG1129	ABC transporter
B0909_13575	COG1879	ABC-type sugar transport system periplasmic component
B0909_13580	COG1349	DNA-binding transcription factor activity
B0909_13605	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
B0909_13700	COG1368	sulfuric ester hydrolase activity
B0909_13705	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_13780	COG1082	Xylose isomerase domain protein TIM barrel
B0909_13790	COG1082	Xylose isomerase domain protein TIM barrel
B0909_13800	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_13805	COG1129	ABC transporter
B0909_13825	COG3284	Transcriptional regulator
B0909_13830	COG1063	alcohol dehydrogenase
B0909_13840	COG0488	(ABC) transporter
B0909_13845	COG5265	(ABC) transporter
B0909_13850	COG3181	Tripartite tricarboxylate transporter family receptor
B0909_13865	COG3842	ATPase activity
B0909_13875	COG1840	ABC-type Fe3 transport system, periplasmic component
B0909_13880	COG1840	ABC-type Fe3 transport system, periplasmic component
B0909_13885	COG0745	RESPONSE REGULATOR receiver
B0909_13905	COG0405	Gamma-glutamyltransferase
B0909_13915	COG0601	transmembrane transport
B0909_13920	COG0747	negative chemotaxis
B0909_13925	COG2186	Transcriptional regulator
B0909_13935	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_13940	COG4172	Belongs to the ABC transporter superfamily
B0909_13945	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_13950	COG0601	transmembrane transport
B0909_13955	COG0747	negative chemotaxis
B0909_13960	COG2186	Transcriptional regulator
B0909_13970	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_13985	COG3383	formate dehydrogenase (NAD+) activity
B0909_14010	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
B0909_14015	COG1802	Transcriptional regulator
B0909_14020	COG4608	Belongs to the ABC transporter superfamily
B0909_14025	COG0444	Belongs to the ABC transporter superfamily
B0909_14030	COG0402	S-adenosylhomocysteine deaminase activity
B0909_14040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_14045	COG0601	transmembrane transport
B0909_14055	COG0402	S-adenosylhomocysteine deaminase activity
B0909_14070	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
B0909_14080	COG0765	amino acid transport
B0909_14090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_14100	COG1609	Transcriptional regulator
B0909_14105	COG3938	Belongs to the proline racemase family
B0909_14115	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_14125	COG0765	amino acid transport
B0909_14140	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
B0909_14145	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_14155	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
B0909_14160	COG0784	Response regulator, receiver
B0909_14180	COG1486	melibiose metabolic process
B0909_14185	COG4172	Belongs to the ABC transporter superfamily
B0909_14190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_14195	COG0601	transmembrane transport
B0909_14200	COG0747	negative chemotaxis
B0909_14205	COG1486	melibiose metabolic process
B0909_14230	COG1940	carbohydrate kinase activity
B0909_14235	COG2182	Extracellular solute-binding protein
B0909_14240	COG1175	transmembrane transport
B0909_14245	COG0395	ABC-type sugar transport system, permease component
B0909_14250	COG0165	Argininosuccinate lyase
B0909_14255	COG3842	ATPase activity
B0909_14260	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_14265	COG3119	arylsulfatase activity
B0909_14275	COG0583	DNA-binding transcription factor activity
B0909_14280	COG1012	belongs to the aldehyde dehydrogenase family
B0909_14325	COG1120	ATPase activity
B0909_14330	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_14335	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_14345	COG4774	siderophore transport
B0909_14350	COG2207	Transcriptional regulator
B0909_14360	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
B0909_14405	COG5002	protein histidine kinase activity
B0909_14410	COG0745	RESPONSE REGULATOR receiver
B0909_14430	COG1392	Phosphate transport regulator
B0909_14435	COG0306	phosphate transporter
B0909_14440	COG5001	Diguanylate cyclase
B0909_14440	COG3300	MHYT domain
B0909_14450	COG0747	negative chemotaxis
B0909_14455	COG1312	Catalyzes the dehydration of D-mannonate
B0909_14460	COG2186	Transcriptional regulator
B0909_14465	COG0601	transmembrane transport
B0909_14470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_14475	COG0444	Belongs to the ABC transporter superfamily
B0909_14495	COG0210	DNA helicase
B0909_14500	COG4774	siderophore transport
B0909_14505	COG1120	ATPase activity
B0909_14510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_14515	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_14530	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
B0909_14535	COG1088	dTDP-glucose 4,6-dehydratase activity
B0909_14540	COG1091	dTDP-4-dehydrorhamnose reductase activity
B0909_14545	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
B0909_14555	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
B0909_14560	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
B0909_14565	COG1132	(ABC) transporter
B0909_14580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_14590	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_14600	COG0179	Fumarylacetoacetate (FAA) hydrolase
B0909_14610	COG0583	DNA-binding transcription factor activity
B0909_14615	COG0667	Aldo Keto reductase
B0909_14620	COG0385	Bile acid
B0909_14645	COG0300	oxidoreductase activity
B0909_14650	COG0483	inositol monophosphate 1-phosphatase activity
B0909_14655	COG0584	glycerophosphoryl diester phosphodiesterase
B0909_14665	COG4149	molybdate abc transporter
B0909_14670	COG3842	ATPase activity
B0909_14680	COG1940	carbohydrate kinase activity
B0909_14690	COG3712	iron ion homeostasis
B0909_14695	COG4774	siderophore transport
B0909_14700	COG2814	Major facilitator Superfamily
B0909_14720	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
B0909_14735	COG1175	transmembrane transport
B0909_14740	COG0395	ABC-type sugar transport system, permease component
B0909_14745	COG1609	Transcriptional regulator
B0909_14755	COG0673	inositol 2-dehydrogenase activity
B0909_14760	COG1082	Xylose isomerase domain protein TIM barrel
B0909_14775	COG1609	Transcriptional regulator
B0909_14785	COG0183	Belongs to the thiolase family
B0909_14790	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
B0909_14800	COG1414	Transcriptional regulator
B0909_14815	COG0583	DNA-binding transcription factor activity
B0909_14825	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
B0909_14830	COG3485	protocatechuate 3,4-dioxygenase
B0909_14835	COG3485	protocatechuate 3,4-dioxygenase
B0909_14845	COG0765	amino acid transport
B0909_14850	COG0765	amino acid transport
B0909_14855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_14860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_14865	COG1126	abc transporter atp-binding protein
B0909_14870	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
B0909_14875	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
B0909_14900	COG0747	negative chemotaxis
B0909_14910	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_14920	COG2207	Transcriptional regulator
B0909_14930	COG0683	leucine binding
B0909_14940	COG0559	Belongs to the binding-protein-dependent transport system permease family
B0909_14970	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_14975	COG3962	Belongs to the TPP enzyme family
B0909_14990	COG3718	enzyme involved in inositol metabolism
B0909_15005	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
B0909_15015	COG1609	Transcriptional regulator
B0909_15020	COG1846	Transcriptional regulator
B0909_15030	COG0523	cobalamin synthesis protein
B0909_15075	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
B0909_15095	COG0800	Aldolase
B0909_15115	COG5001	Diguanylate cyclase
B0909_15115	COG3300	MHYT domain
B0909_15125	COG2011	ABC-type metal ion transport system permease component
B0909_15130	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
B0909_15135	COG0778	Nitroreductase
B0909_15175	COG0583	DNA-binding transcription factor activity
B0909_15180	COG1879	ABC-type sugar transport system periplasmic component
B0909_15185	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_15190	COG1129	ABC transporter
B0909_15200	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
B0909_15205	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_15210	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
B0909_15215	COG1309	transcriptional regulator
B0909_15225	COG3257	ureidoglycine aminohydrolase activity
B0909_15235	COG5001	Diguanylate cyclase
B0909_15240	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
B0909_15250	COG0747	negative chemotaxis
B0909_15255	COG0601	transmembrane transport
B0909_15260	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_15265	COG0444	Belongs to the ABC transporter superfamily
B0909_15270	COG4608	Belongs to the ABC transporter superfamily
B0909_15275	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
B0909_15290	COG0346	lactoylglutathione lyase activity
B0909_15300	COG0129	dihydroxy-acid dehydratase activity
B0909_15305	COG1879	ABC-type sugar transport system periplasmic component
B0909_15310	COG1129	ABC transporter
B0909_15315	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_15320	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_15325	COG2186	Transcriptional regulator
B0909_15340	COG0523	cobalamin synthesis protein
B0909_15345	COG1653	transport
B0909_15350	COG1175	transmembrane transport
B0909_15355	COG0395	ABC-type sugar transport system, permease component
B0909_15360	COG3842	ATPase activity
B0909_15370	COG3047	cAMP biosynthetic process
B0909_15375	COG2115	Belongs to the xylose isomerase family
B0909_15380	COG1070	Carbohydrate kinase
B0909_15385	COG1609	Transcriptional regulator
B0909_15400	COG1309	transcriptional regulator
B0909_15405	COG1253	flavin adenine dinucleotide binding
B0909_15410	COG2827	Endonuclease containing a URI domain
B0909_15415	COG0471	metal ion transport
B0909_15415	COG3273	potassium ion transport
B0909_15420	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
B0909_15430	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
B0909_15435	COG1752	Esterase of the alpha-beta hydrolase superfamily
B0909_15445	COG0803	Belongs to the bacterial solute-binding protein 9 family
B0909_15450	COG1121	(ABC) transporter
B0909_15455	COG1108	ABC-type Mn2 Zn2 transport systems permease components
B0909_15460	COG1108	ABC-type Mn2 Zn2 transport systems permease components
B0909_15470	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_15475	COG1414	Transcriptional regulator
B0909_15480	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
B0909_15495	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
B0909_15520	COG1069	ribulokinase activity
B0909_15550	COG1175	transmembrane transport
B0909_15560	COG2390	Transcriptional regulator
B0909_15565	COG4172	Belongs to the ABC transporter superfamily
B0909_15570	COG1473	amidohydrolase
B0909_15580	COG0601	transmembrane transport
B0909_15585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_15600	COG0693	protein deglycase activity
B0909_15605	COG0154	amidase activity
B0909_15610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_15620	COG0747	negative chemotaxis
B0909_15625	COG0583	DNA-binding transcription factor activity
B0909_15635	COG0444	Belongs to the ABC transporter superfamily
B0909_15645	COG0601	transmembrane transport
B0909_15650	COG0747	negative chemotaxis
B0909_15665	COG1473	amidohydrolase
B0909_15670	COG2814	Major facilitator Superfamily
B0909_15675	COG0583	DNA-binding transcription factor activity
B0909_15680	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
B0909_15690	COG3842	ATPase activity
B0909_15700	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_15710	COG1609	Transcriptional regulator
B0909_15715	COG0583	DNA-binding transcription factor activity
B0909_15720	COG1960	acyl-CoA dehydrogenase activity
B0909_15725	COG1629	transport
B0909_15725	COG4774	siderophore transport
B0909_15740	COG1120	ATPase activity
B0909_15745	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_15750	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_15760	COG2375	cellular response to nickel ion
B0909_15770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
B0909_15775	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
B0909_15775	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
B0909_15785	COG1169	isochorismate synthase
B0909_15790	COG1021	2,3-dihydroxybenzoate-AMP ligase
B0909_15795	COG1535	isochorismatase
B0909_15795	COG3433	isochorismatase activity
B0909_15800	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_15815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_15820	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
B0909_15825	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
B0909_15830	COG0583	DNA-binding transcription factor activity
B0909_15835	COG3005	denitrification pathway
B0909_15845	COG0243	molybdopterin cofactor binding
B0909_15860	COG4459	periplasmic nitrate reductase
B0909_15870	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
B0909_15905	COG3189	MarR family transcriptional regulator
B0909_15910	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
B0909_15945	COG3256	nitric oxide reductase
B0909_15950	COG0714	Associated with various cellular activities
B0909_16010	COG0673	inositol 2-dehydrogenase activity
B0909_16020	COG1609	Transcriptional regulator
B0909_16025	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_16030	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_16035	COG1129	ABC transporter
B0909_16040	COG1879	ABC-type sugar transport system periplasmic component
B0909_16060	COG0668	transmembrane transport
B0909_16075	COG0404	The glycine cleavage system catalyzes the degradation of glycine
B0909_16075	COG0446	pyridine nucleotide-disulphide oxidoreductase
B0909_16085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_16115	COG1177	transmembrane transport
B0909_16120	COG3842	ATPase activity
B0909_16140	COG1082	Xylose isomerase domain protein TIM barrel
B0909_16145	COG1609	Transcriptional regulator
B0909_16150	COG0673	inositol 2-dehydrogenase activity
B0909_16165	COG0583	DNA-binding transcription factor activity
B0909_16195	COG1609	Transcriptional regulator
B0909_16200	COG0673	inositol 2-dehydrogenase activity
B0909_16215	COG1175	transmembrane transport
B0909_16220	COG0395	ABC-type sugar transport system, permease component
B0909_16225	COG3842	ATPase activity
B0909_16240	COG2188	Transcriptional regulator
B0909_16260	COG0586	Pfam SNARE associated Golgi protein
B0909_16265	COG1253	flavin adenine dinucleotide binding
B0909_16275	COG0483	inositol monophosphate 1-phosphatase activity
B0909_16295	COG3842	ATPase activity
B0909_16300	COG1178	ABC-type Fe3 transport system permease component
B0909_16330	COG5001	Diguanylate cyclase
B0909_16330	COG3300	MHYT domain
B0909_16450	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_16460	COG1879	ABC-type sugar transport system periplasmic component
B0909_16470	COG1063	alcohol dehydrogenase
B0909_16485	COG1136	(ABC) transporter
B0909_16500	COG1309	transcriptional regulator
B0909_16515	COG1522	sequence-specific DNA binding
B0909_16525	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
B0909_16530	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
B0909_16535	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
B0909_16540	COG2423	ornithine cyclodeaminase activity
B0909_16545	COG0006	proline dipeptidase activity
B0909_16550	COG3608	succinylglutamate desuccinylase aspartoacylase
B0909_16555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_16560	COG0765	amino acid transport
B0909_16565	COG0765	amino acid transport
B0909_16570	COG1126	abc transporter atp-binding protein
B0909_16575	COG0583	DNA-binding transcription factor activity
B0909_16580	COG4221	oxidoreductase activity
B0909_16620	COG1929	Belongs to the glycerate kinase type-1 family
B0909_16625	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
B0909_16630	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_16640	COG0583	DNA-binding transcription factor activity
B0909_16665	COG2814	Major facilitator Superfamily
B0909_16675	COG2205	protein histidine kinase activity
B0909_16680	COG0745	RESPONSE REGULATOR receiver
B0909_16690	COG2132	Multicopper oxidase
B0909_16695	COG0583	DNA-binding transcription factor activity
B0909_16700	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
B0909_16705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_16710	COG4597	amino acid ABC transporter
B0909_16715	COG0765	amino acid transport
B0909_16720	COG1126	abc transporter atp-binding protein
B0909_16735	COG1609	Transcriptional regulator
B0909_16745	COG0673	inositol 2-dehydrogenase activity
B0909_16750	COG0363	glucosamine-6-phosphate deaminase activity
B0909_16755	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
B0909_16760	COG3842	ATPase activity
B0909_16770	COG1175	transmembrane transport
B0909_16775	COG0395	ABC-type sugar transport system, permease component
B0909_16780	COG1312	Catalyzes the dehydration of D-mannonate
B0909_16785	COG0246	Mannitol dehydrogenase
B0909_16795	COG1126	abc transporter atp-binding protein
B0909_16800	COG0765	amino acid transport
B0909_16815	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
B0909_16825	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
B0909_16840	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
B0909_16850	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_16905	COG0739	heme binding
B0909_16905	COG0741	lytic transglycosylase activity
B0909_16905	COG1196	nuclear chromosome segregation
B0909_16910	COG0542	response to heat
B0909_16920	COG2890	protein-(glutamine-N5) methyltransferase activity
B0909_16925	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
B0909_16935	COG0527	aspartate kinase activity
B0909_16955	COG1309	transcriptional regulator
B0909_16965	COG0019	diaminopimelate decarboxylase activity
B0909_16980	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
B0909_16990	COG3920	Histidine kinase
B0909_17000	COG0784	Response regulator, receiver
B0909_17015	COG1522	sequence-specific DNA binding
B0909_17025	COG1116	anion transmembrane transporter activity
B0909_17030	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_17035	COG1012	belongs to the aldehyde dehydrogenase family
B0909_17040	COG0583	DNA-binding transcription factor activity
B0909_17045	COG0435	Glutathione S-transferase
B0909_17055	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
B0909_17060	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
B0909_17065	COG0189	ligase activity
B0909_17080	COG4993	Dehydrogenase
B0909_17100	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_17105	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
B0909_17125	COG0559	Belongs to the binding-protein-dependent transport system permease family
B0909_17130	COG0410	ABC transporter
B0909_17150	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_17165	COG0246	Mannitol dehydrogenase
B0909_17170	COG4608	Belongs to the ABC transporter superfamily
B0909_17175	COG0444	Belongs to the ABC transporter superfamily
B0909_17180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_17185	COG0601	transmembrane transport
B0909_17190	COG0747	negative chemotaxis
B0909_17205	COG4221	oxidoreductase activity
B0909_17235	COG0539	negative regulation of cytoplasmic translation
B0909_17240	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
B0909_17270	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
B0909_17275	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
B0909_17305	COG1294	oxidase, subunit
B0909_17315	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
B0909_17320	COG4988	ABC transporter
B0909_17330	COG1063	alcohol dehydrogenase
B0909_17335	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_17340	COG2084	Dehydrogenase
B0909_17350	COG1522	sequence-specific DNA binding
B0909_17355	COG1794	racemase activity, acting on amino acids and derivatives
B0909_17370	COG0058	SHG alpha-glucan phosphorylase activity
B0909_17375	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
B0909_17380	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
B0909_17385	COG0297	glycogen (starch) synthase activity
B0909_17390	COG0033	Phosphoglucomutase
B0909_17405	COG1733	regulation of RNA biosynthetic process
B0909_17420	COG0404	The glycine cleavage system catalyzes the degradation of glycine
B0909_17420	COG0446	pyridine nucleotide-disulphide oxidoreductase
B0909_17435	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_17445	COG0828	Belongs to the bacterial ribosomal protein bS21 family
B0909_17465	COG1215	transferase activity, transferring glycosyl groups
B0909_17470	COG2327	Polysaccharide pyruvyl transferase
B0909_17475	COG0463	Glycosyl transferase, family 2
B0909_17480	COG2244	polysaccharide biosynthetic process
B0909_17485	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
B0909_17490	COG2273	Hydrolase Family 16
B0909_17505	COG1215	transferase activity, transferring glycosyl groups
B0909_17510	COG1215	transferase activity, transferring glycosyl groups
B0909_17515	COG1210	Utp--glucose-1-phosphate uridylyltransferase
B0909_17520	COG3206	protein involved in exopolysaccharide biosynthesis
B0909_17520	COG0489	protein tyrosine kinase activity
B0909_17525	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
B0909_17535	COG4176	ABC-type proline glycine betaine transport system permease component
B0909_17540	COG4175	Glycine betaine
B0909_17540	COG0517	IMP dehydrogenase activity
B0909_17555	COG0564	pseudouridine synthase activity
B0909_17560	COG0500	methyltransferase
B0909_17570	COG2133	pyrroloquinoline quinone binding
B0909_17580	COG2197	response regulator
B0909_17585	COG4585	Histidine kinase
B0909_17595	COG1879	ABC-type sugar transport system periplasmic component
B0909_17600	COG1129	ABC transporter
B0909_17605	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_17615	COG3386	PFAM SMP-30 Gluconolaconase
B0909_17620	COG2137	regulation of response to DNA damage stimulus
B0909_17625	COG3474	cytochrome
B0909_17635	COG1120	ATPase activity
B0909_17650	COG4774	siderophore transport
B0909_17655	COG0583	DNA-binding transcription factor activity
B0909_17665	COG2194	sulfuric ester hydrolase activity
B0909_17670	COG0745	RESPONSE REGULATOR receiver
B0909_17675	COG0642	Histidine kinase
B0909_17680	COG0477	Major facilitator Superfamily
B0909_17700	COG0673	inositol 2-dehydrogenase activity
B0909_17710	COG0697	spore germination
B0909_17735	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
B0909_17740	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
B0909_17745	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
B0909_17755	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
B0909_17780	COG0745	RESPONSE REGULATOR receiver
B0909_17785	COG2205	protein histidine kinase activity
B0909_17825	COG0477	Major facilitator Superfamily
B0909_17830	COG0583	DNA-binding transcription factor activity
B0909_17860	COG2268	Band 7 protein
B0909_17865	COG1309	transcriptional regulator
B0909_17885	COG0356	it plays a direct role in the translocation of protons across the membrane
B0909_17890	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
B0909_17900	COG2706	6-phosphogluconolactonase activity
B0909_17940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_17950	COG0583	DNA-binding transcription factor activity
B0909_17960	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
B0909_17965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_17970	COG2274	protein secretion by the type I secretion system
B0909_17985	COG1538	Outer membrane efflux protein
B0909_17990	COG2986	histidine ammonia-lyase
B0909_17995	COG0517	IMP dehydrogenase activity
B0909_17995	COG4175	Glycine betaine
B0909_18000	COG4176	ABC-type proline glycine betaine transport system permease component
B0909_18040	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
B0909_18045	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
B0909_18050	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
B0909_18055	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_18060	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_18070	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_18075	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_18080	COG1063	alcohol dehydrogenase
B0909_18090	COG3842	ATPase activity
B0909_18095	COG0395	ABC-type sugar transport system, permease component
B0909_18120	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
B0909_18130	COG3938	Belongs to the proline racemase family
B0909_18135	COG4176	ABC-type proline glycine betaine transport system permease component
B0909_18140	COG4176	ABC-type proline glycine betaine transport system permease component
B0909_18145	COG3448	diguanylate cyclase activity
B0909_18145	COG4175	Glycine betaine
B0909_18160	COG1012	belongs to the aldehyde dehydrogenase family
B0909_18165	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_18170	COG1802	Transcriptional regulator
B0909_18195	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_18200	COG3842	ATPase activity
B0909_18220	COG2072	flavoprotein involved in K transport
B0909_18230	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
B0909_18235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_18240	COG1116	anion transmembrane transporter activity
B0909_18250	COG1522	sequence-specific DNA binding
B0909_18255	COG1733	regulation of RNA biosynthetic process
B0909_18275	COG2382	esterase
B0909_18285	COG0789	Transcriptional regulator
B0909_18290	COG2814	Major facilitator Superfamily
B0909_18385	COG0402	S-adenosylhomocysteine deaminase activity
B0909_18390	COG1228	amidohydrolase
B0909_18395	COG2986	histidine ammonia-lyase
B0909_18410	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
B0909_18440	COG1192	Involved in chromosome partitioning
B0909_18445	COG1475	DNA binding
B0909_18450	COG1414	Transcriptional regulator
B0909_18460	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
B0909_18465	COG4771	TonB-dependent receptor
B0909_18470	COG0789	Transcriptional regulator
B0909_18475	COG0366	Alpha amylase catalytic
B0909_18480	COG4770	biotin carboxylase activity
B0909_18485	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
B0909_18490	COG4336	lyase activity
B0909_18495	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
B0909_18500	COG1914	H( )-stimulated, divalent metal cation uptake system
B0909_18505	COG1802	Transcriptional regulator
B0909_18510	COG3707	response regulator
B0909_18520	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
B0909_18525	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_18530	COG1116	anion transmembrane transporter activity
B0909_18535	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
B0909_18550	COG0243	molybdopterin cofactor binding
B0909_18555	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
B0909_18555	COG1648	precorrin-2 dehydrogenase activity
B0909_18570	COG3842	ATPase activity
B0909_18585	COG0395	ABC-type sugar transport system, permease component
B0909_18600	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
B0909_18615	COG0071	Belongs to the small heat shock protein (HSP20) family
B0909_18645	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
B0909_18655	COG1129	ABC transporter
B0909_18670	COG0667	Aldo Keto reductase
B0909_18675	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
B0909_18680	COG1830	Aldolase
B0909_18685	COG1070	Carbohydrate kinase
B0909_18700	COG2076	Multidrug Resistance protein
B0909_18710	COG1647	Serine aminopeptidase, S33
B0909_18730	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
B0909_18735	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
B0909_18740	COG2205	protein histidine kinase activity
B0909_18745	COG0745	RESPONSE REGULATOR receiver
B0909_18760	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
B0909_18775	COG3842	ATPase activity
B0909_18780	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_18785	COG1177	transmembrane transport
B0909_18800	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
B0909_18810	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
B0909_18825	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_18835	COG4172	Belongs to the ABC transporter superfamily
B0909_18840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_18845	COG0601	transmembrane transport
B0909_18850	COG4166	transmembrane transport
B0909_18855	COG0395	ABC-type sugar transport system, permease component
B0909_18925	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
B0909_18940	COG1032	radical SAM domain protein
B0909_18955	COG0372	Belongs to the citrate synthase family
B0909_18960	COG0372	Belongs to the citrate synthase family
B0909_19020	COG4221	oxidoreductase activity
B0909_19030	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_19035	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
B0909_19045	COG3842	ATPase activity
B0909_19050	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
B0909_19055	COG1984	allophanate hydrolase subunit 2
B0909_19060	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
B0909_19070	COG0439	Biotin carboxylase
B0909_19075	COG0511	ligase activity, forming carbon-carbon bonds
B0909_19080	COG0697	spore germination
B0909_19085	COG0697	spore germination
B0909_19100	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
B0909_19115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
B0909_19125	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
B0909_19130	COG4221	oxidoreductase activity
B0909_19135	COG0765	amino acid transport
B0909_19140	COG0765	amino acid transport
B0909_19150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_19155	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
B0909_19160	COG1063	alcohol dehydrogenase
B0909_19200	COG1846	Transcriptional regulator
B0909_19210	COG1304	FMN binding
B0909_19215	COG2171	N-acyltransferase activity
B0909_19235	COG3842	ATPase activity
B0909_19245	COG0395	ABC-type sugar transport system, permease component
B0909_19250	COG1175	transmembrane transport
B0909_19265	COG2186	Transcriptional regulator
B0909_19270	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
B0909_19275	COG0488	(ABC) transporter
B0909_19290	COG2307	Protein conserved in bacteria
B0909_19290	COG2308	Evidence 4 Homologs of previously reported genes of
B0909_19315	COG1607	acyl-coa hydrolase
B0909_19330	COG2186	Transcriptional regulator
B0909_19335	COG1454	alcohol dehydrogenase
B0909_19340	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
B0909_19350	COG0747	negative chemotaxis
B0909_19355	COG0601	transmembrane transport
B0909_19365	COG4172	Belongs to the ABC transporter superfamily
B0909_19370	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_19385	COG2957	Belongs to the agmatine deiminase family
B0909_19390	COG1082	Xylose isomerase domain protein TIM barrel
B0909_19395	COG1082	Xylose isomerase domain protein TIM barrel
B0909_19400	COG0673	inositol 2-dehydrogenase activity
B0909_19405	COG1082	Xylose isomerase domain protein TIM barrel
B0909_19425	COG1609	Transcriptional regulator
B0909_19435	COG0446	pyridine nucleotide-disulphide oxidoreductase
B0909_19435	COG0404	The glycine cleavage system catalyzes the degradation of glycine
B0909_19440	COG4311	Sarcosine oxidase, delta subunit
B0909_19445	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_19450	COG4977	sequence-specific DNA binding
B0909_19460	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
B0909_19465	COG2218	PFAM glutamate synthase alpha subunit domain protein
B0909_19470	COG0069	glutamate synthase activity
B0909_19475	COG0174	glutamine synthetase
B0909_19500	COG1126	abc transporter atp-binding protein
B0909_19515	COG2267	carboxylic ester hydrolase activity
B0909_19525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_19530	COG1012	belongs to the aldehyde dehydrogenase family
B0909_19545	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_19550	COG1177	transmembrane transport
B0909_19555	COG3842	ATPase activity
B0909_19565	COG1309	transcriptional regulator
B0909_19580	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
B0909_19585	COG2186	Transcriptional regulator
B0909_19590	COG1027	Aspartate ammonia-lyase
B0909_19600	COG0252	asparaginase activity
B0909_19610	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
B0909_19615	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
B0909_19620	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
B0909_19625	COG2205	protein histidine kinase activity
B0909_19640	COG0070	glutamate synthase
B0909_19640	COG0067	glutamate synthase
B0909_19640	COG0069	glutamate synthase activity
B0909_19650	COG2205	protein histidine kinase activity
B0909_19665	COG2951	lytic endotransglycosylase activity
B0909_19670	COG1210	Utp--glucose-1-phosphate uridylyltransferase
B0909_19700	COG0330	HflC and HflK could
B0909_19705	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
B0909_19710	COG0737	Belongs to the 5'-nucleotidase family
B0909_19720	COG5310	Homospermidine synthase
B0909_19730	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
B0909_19735	COG1164	Oligoendopeptidase f
B0909_19740	COG2204	response regulator
B0909_19745	COG3108	Peptidase M15
B0909_19750	COG0469	pyruvate kinase activity
B0909_19770	COG3750	Belongs to the UPF0335 family
B0909_19775	COG0457	Tetratricopeptide repeat
B0909_19780	COG0257	Belongs to the bacterial ribosomal protein bL36 family
B0909_19785	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
B0909_19790	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
B0909_19820	COG0483	inositol monophosphate 1-phosphatase activity
B0909_19830	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
B0909_19830	COG2885	chlorophyll binding
B0909_19840	COG1132	(ABC) transporter
B0909_19845	COG0254	rRNA binding
B0909_19865	COG3588	fructose-bisphosphate aldolase
B0909_19870	COG0126	phosphoglycerate kinase activity
B0909_19915	COG1253	flavin adenine dinucleotide binding
B0909_19925	COG1692	metallophosphoesterase
B0909_19940	COG0217	transcriptional regulatory protein
B0909_19945	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_19950	COG0840	transmembrane signaling receptor activity
B0909_19955	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
B0909_19960	COG0632	four-way junction helicase activity
B0909_19965	COG2255	four-way junction helicase activity
B0909_19980	COG0494	nUDIX hydrolase
B0909_19990	COG0824	Thioesterase
B0909_20010	COG0823	Involved in the tonB-independent uptake of proteins
B0909_20015	COG2885	chlorophyll binding
B0909_20025	COG0037	tRNA processing
B0909_20030	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
B0909_20035	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
B0909_20050	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
B0909_20065	COG0482	sulfurtransferase activity
B0909_20085	COG3118	belongs to the thioredoxin family
B0909_20095	COG2835	tetraacyldisaccharide 4'-kinase activity
B0909_20100	COG2373	Large extracellular alpha-helical protein
B0909_20105	COG4953	penicillin-binding protein 1C
B0909_20120	COG1129	ABC transporter
B0909_20125	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_20145	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
B0909_20155	COG1012	belongs to the aldehyde dehydrogenase family
B0909_20160	COG0673	inositol 2-dehydrogenase activity
B0909_20165	COG3962	Belongs to the TPP enzyme family
B0909_20175	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_20185	COG0673	inositol 2-dehydrogenase activity
B0909_20195	COG3501	Rhs element vgr protein
B0909_20240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_20245	COG1609	Transcriptional regulator
B0909_20250	COG4209	transmembrane transport
B0909_20255	COG0395	ABC-type sugar transport system, permease component
B0909_20270	COG3842	ATPase activity
B0909_20290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_20295	COG0577	efflux transmembrane transporter activity
B0909_20295	COG1136	(ABC) transporter
B0909_20305	COG1733	regulation of RNA biosynthetic process
B0909_20320	COG2072	flavoprotein involved in K transport
B0909_20325	COG0583	DNA-binding transcription factor activity
B0909_20335	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
B0909_20345	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_20350	COG3842	ATPase activity
B0909_20385	COG4691	Plasmid stability protein
B0909_20415	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
B0909_20420	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
B0909_20470	COG1473	amidohydrolase
B0909_20475	COG1686	Belongs to the peptidase S11 family
B0909_20480	COG0523	cobalamin synthesis protein
B0909_20485	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
B0909_20485	COG0425	Belongs to the sulfur carrier protein TusA family
B0909_20490	COG3034	peptidoglycan biosynthetic process
B0909_20495	COG0825	malonyl-CoA metabolic process
B0909_20500	COG4974	Belongs to the 'phage' integrase family
B0909_20510	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
B0909_20515	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
B0909_20550	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
B0909_20555	COG0227	Belongs to the bacterial ribosomal protein bL28 family
B0909_20570	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
B0909_20575	COG2226	methyltransferase
B0909_20580	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
B0909_20585	COG0287	Prephenate dehydrogenase
B0909_20595	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
B0909_20615	COG2884	Cell division ATP-binding protein ftsE
B0909_20650	COG0165	Argininosuccinate lyase
B0909_20655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
B0909_20665	COG1250	3-hydroxyacyl-CoA dehydrogenase
B0909_20675	COG2086	electron transfer activity
B0909_20695	COG0300	oxidoreductase activity
B0909_20705	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
B0909_20715	COG3800	Transcriptional regulator
B0909_20715	COG1396	sequence-specific DNA binding
B0909_20720	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
B0909_20725	COG0625	glutathione transferase activity
B0909_20735	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
B0909_20770	COG4213	ABC transporter substrate-binding protein
B0909_20775	COG4214	carbohydrate transport
B0909_20780	COG1129	ABC transporter
B0909_20785	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
B0909_20795	COG1396	sequence-specific DNA binding
B0909_20850	COG3833	ABC-type maltose transport systems, permease component
B0909_20855	COG3842	ATPase activity
B0909_20870	COG2273	Hydrolase Family 16
B0909_20870	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
B0909_20890	COG0438	transferase activity, transferring glycosyl groups
B0909_20895	COG0438	transferase activity, transferring glycosyl groups
B0909_20900	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
B0909_20920	COG3206	protein involved in exopolysaccharide biosynthesis
B0909_20920	COG0489	protein tyrosine kinase activity
B0909_20930	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
B0909_20945	COG2244	polysaccharide biosynthetic process
B0909_20960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
B0909_20990	COG1733	regulation of RNA biosynthetic process
B0909_21025	COG0653	protein targeting
B0909_21030	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
B0909_21035	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
B0909_21045	COG0494	nUDIX hydrolase
B0909_21060	COG2226	methyltransferase
B0909_21065	COG1040	competence protein
B0909_21075	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
B0909_21090	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
B0909_21105	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
B0909_21120	COG4208	sulfate ABC transporter
B0909_21125	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
B0909_21130	COG4335	DNA alkylation repair
B0909_21150	COG5001	Diguanylate cyclase
B0909_21155	COG2264	protein methyltransferase activity
B0909_21170	COG3254	rhamnose metabolic process
B0909_21180	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_21185	COG1129	ABC transporter
B0909_21200	COG1349	DNA-binding transcription factor activity
B0909_21205	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_21205	COG3347	Dehydrogenase
B0909_21210	COG4952	isomerase
B0909_21215	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
B0909_21220	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
B0909_21225	COG1024	Enoyl-CoA hydratase
B0909_21240	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
B0909_21245	COG1960	acyl-CoA dehydrogenase activity
B0909_21255	COG0183	Belongs to the thiolase family
B0909_21260	COG1960	acyl-CoA dehydrogenase activity
B0909_21270	COG0022	dehydrogenase e1 component
B0909_21285	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
B0909_21290	COG2391	methyltransferase activity
B0909_21300	COG0640	Transcriptional regulator
B0909_21305	COG3453	Protein conserved in bacteria
B0909_21305	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
B0909_21310	COG2186	Transcriptional regulator
B0909_21320	COG0601	transmembrane transport
B0909_21330	COG0444	Belongs to the ABC transporter superfamily
B0909_21335	COG4608	Belongs to the ABC transporter superfamily
B0909_21355	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_21375	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_21380	COG1473	amidohydrolase
B0909_21385	COG0747	negative chemotaxis
B0909_21415	COG2994	toxin metabolic process
B0909_21435	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
B0909_21440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_21465	COG0583	DNA-binding transcription factor activity
B0909_21475	COG0667	Aldo Keto reductase
B0909_21510	COG1960	acyl-CoA dehydrogenase activity
B0909_21540	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
B0909_21550	COG1959	2 iron, 2 sulfur cluster binding
B0909_21555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_21560	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_21565	COG1473	amidohydrolase
B0909_21575	COG1126	abc transporter atp-binding protein
B0909_21590	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_21595	COG1522	sequence-specific DNA binding
B0909_21600	COG4172	Belongs to the ABC transporter superfamily
B0909_21605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_21645	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_21650	COG1012	belongs to the aldehyde dehydrogenase family
B0909_21655	COG0473	3-isopropylmalate dehydrogenase activity
B0909_21660	COG1012	belongs to the aldehyde dehydrogenase family
B0909_21670	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
B0909_21675	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
B0909_21690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_21695	COG1120	ATPase activity
B0909_21705	COG2226	methyltransferase
B0909_21720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
B0909_21725	COG1120	ATPase activity
B0909_21730	COG1595	DNA-templated transcription, initiation
B0909_21750	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
B0909_21755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_21775	COG0673	inositol 2-dehydrogenase activity
B0909_21780	COG0673	inositol 2-dehydrogenase activity
B0909_21790	COG1175	transmembrane transport
B0909_21795	COG0395	ABC-type sugar transport system, permease component
B0909_21800	COG3842	ATPase activity
B0909_21810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
B0909_21815	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
B0909_21820	COG2197	response regulator
B0909_21825	COG0601	transmembrane transport
B0909_21850	COG0747	negative chemotaxis
B0909_21865	COG1446	asparaginase
B0909_21870	COG0583	DNA-binding transcription factor activity
B0909_21875	COG0601	transmembrane transport
B0909_21885	COG4172	Belongs to the ABC transporter superfamily
B0909_21900	COG1473	amidohydrolase
B0909_21915	COG1129	ABC transporter
B0909_21920	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_21925	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
B0909_21930	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
B0909_21940	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
B0909_21955	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_21970	COG2079	MmgE PrpD family protein
B0909_21975	COG1126	abc transporter atp-binding protein
B0909_21980	COG0765	amino acid transport
B0909_21995	COG0280	phosphate acetyltransferase
B0909_21995	COG0281	malic enzyme
B0909_22020	COG0395	ABC-type sugar transport system, permease component
B0909_22035	COG0673	inositol 2-dehydrogenase activity
B0909_22040	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
B0909_22045	COG0720	synthase
B0909_22050	COG0602	queuosine metabolic process
B0909_22055	COG0673	inositol 2-dehydrogenase activity
B0909_22065	COG3842	ATPase activity
B0909_22080	COG1653	transport
B0909_22085	COG1609	Transcriptional regulator
B0909_22100	COG2094	Belongs to the DNA glycosylase MPG family
B0909_22110	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_22120	COG1376	ErfK ybiS ycfS ynhG family protein
B0909_22125	COG0840	transmembrane signaling receptor activity
B0909_22125	COG2972	Histidine kinase
B0909_22140	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
B0909_22145	COG1596	polysaccharide export
B0909_22150	COG3307	-O-antigen
B0909_22190	COG2197	response regulator
B0909_22200	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
B0909_22225	COG2942	2-epimerase
B0909_22235	COG1215	transferase activity, transferring glycosyl groups
B0909_22265	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_22270	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
B0909_22280	COG1301	dicarboxylic acid transport
B0909_22285	COG4191	Histidine kinase
B0909_22290	COG2204	response regulator
B0909_22300	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_22305	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
B0909_22310	COG1522	sequence-specific DNA binding
B0909_22320	COG0351	phosphomethylpyrimidine kinase
B0909_22325	COG0352	thiamine-phosphate diphosphorylase activity
B0909_22330	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
B0909_22335	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
B0909_22340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_22350	COG1501	Belongs to the glycosyl hydrolase 31 family
B0909_22355	COG0395	ABC-type sugar transport system, permease component
B0909_22360	COG1175	transmembrane transport
B0909_22365	COG1653	transport
B0909_22370	COG3842	ATPase activity
B0909_22385	COG4989	oxidoreductase activity
B0909_22415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_22420	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
B0909_22425	COG0438	transferase activity, transferring glycosyl groups
B0909_22435	COG0747	negative chemotaxis
B0909_22440	COG0601	transmembrane transport
B0909_22450	COG3964	amidohydrolase
B0909_22465	COG1921	L-seryl-tRNASec selenium transferase activity
B0909_22475	COG0625	glutathione transferase activity
B0909_22480	COG0640	Transcriptional regulator
B0909_22490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
B0909_22495	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
B0909_22500	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
B0909_22520	COG1312	Catalyzes the dehydration of D-mannonate
B0909_22525	COG1063	alcohol dehydrogenase
B0909_22530	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
B0909_22540	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
B0909_22545	COG2186	Transcriptional regulator
B0909_22555	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
B0909_22560	COG0850	regulation of cytokinetic process
B0909_22565	COG2894	cell division
B0909_22570	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
B0909_22580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
B0909_22585	COG5001	Diguanylate cyclase
B0909_22600	COG0673	inositol 2-dehydrogenase activity
B0909_22610	COG1653	transport
B0909_22615	COG1175	transmembrane transport
B0909_22620	COG0395	ABC-type sugar transport system, permease component
B0909_22625	COG3842	ATPase activity
B0909_22635	COG0673	inositol 2-dehydrogenase activity
B0909_22660	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
B0909_22665	COG0587	DNA-directed DNA polymerase activity
B0909_22670	COG2226	methyltransferase
B0909_22685	COG0523	cobalamin synthesis protein
B0909_22690	COG1121	(ABC) transporter
B0909_22700	COG0803	Belongs to the bacterial solute-binding protein 9 family
B0909_22705	COG0328	RNA-DNA hybrid ribonuclease activity
B0909_22715	COG0626	cystathionine gamma-synthase activity
B0909_22730	COG0395	ABC-type sugar transport system, permease component
B0909_22750	COG1175	transmembrane transport
B0909_22755	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
B0909_22760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
B0909_22775	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_22780	COG1063	alcohol dehydrogenase
B0909_22785	COG1609	Transcriptional regulator
B0909_22800	COG2084	Dehydrogenase
B0909_22805	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
B0909_22815	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
B0909_22820	COG0583	DNA-binding transcription factor activity
B0909_22825	COG2223	nitrite transmembrane transporter activity
B0909_22830	COG4977	sequence-specific DNA binding
B0909_22860	COG0667	Aldo Keto reductase
B0909_22875	COG2186	Transcriptional regulator
B0909_22880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
B0909_22885	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
B0909_22890	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_22895	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_22900	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_22905	COG3618	amidohydrolase
B0909_22915	COG1175	transmembrane transport
B0909_22920	COG0395	ABC-type sugar transport system, permease component
B0909_22940	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
B0909_22945	COG2205	protein histidine kinase activity
B0909_22950	COG0745	RESPONSE REGULATOR receiver
B0909_22965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_22970	COG1136	(ABC) transporter
B0909_22970	COG0577	efflux transmembrane transporter activity
B0909_22985	COG1278	Cold shock
B0909_22990	COG0673	inositol 2-dehydrogenase activity
B0909_23005	COG0673	inositol 2-dehydrogenase activity
B0909_23010	COG1309	transcriptional regulator
B0909_23015	COG1653	transport
B0909_23020	COG1175	transmembrane transport
B0909_23025	COG0395	ABC-type sugar transport system, permease component
B0909_23030	COG3842	ATPase activity
B0909_23035	COG1082	Xylose isomerase domain protein TIM barrel
B0909_23040	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
B0909_23080	COG1175	transmembrane transport
B0909_23085	COG0395	ABC-type sugar transport system, permease component
B0909_23090	COG3842	ATPase activity
B0909_23095	COG0395	ABC-type sugar transport system, permease component
B0909_23100	COG1175	transmembrane transport
B0909_23105	COG1653	transport
B0909_23135	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
B0909_23165	COG3842	ATPase activity
B0909_23175	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_23180	COG0395	ABC-type sugar transport system, permease component
B0909_23210	COG5001	Diguanylate cyclase
B0909_23215	COG2233	PERMEase
B0909_23220	COG0583	DNA-binding transcription factor activity
B0909_23225	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
B0909_23235	COG0583	DNA-binding transcription factor activity
B0909_23240	COG2828	Protein conserved in bacteria
B0909_23255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
B0909_23260	COG3734	2-keto-3-deoxy-galactonokinase
B0909_23265	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
B0909_23270	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_23280	COG1175	transmembrane transport
B0909_23285	COG0395	ABC-type sugar transport system, permease component
B0909_23290	COG3842	ATPase activity
B0909_23295	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
B0909_23300	COG1414	Transcriptional regulator
B0909_23305	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_23310	COG0483	inositol monophosphate 1-phosphatase activity
B0909_23320	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
B0909_23340	COG0840	transmembrane signaling receptor activity
B0909_23375	COG3842	ATPase activity
B0909_23380	COG3501	Rhs element vgr protein
B0909_23445	COG0640	Transcriptional regulator
B0909_23530	COG1595	DNA-templated transcription, initiation
B0909_23535	COG0110	maltose O-acetyltransferase activity
B0909_23560	COG0583	DNA-binding transcription factor activity
B0909_23570	COG2814	Major facilitator Superfamily
B0909_23590	COG0270	DNA (cytosine-5-)-methyltransferase activity
B0909_23670	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
B0909_23680	COG4974	Belongs to the 'phage' integrase family
B0909_23685	COG0582	viral genome integration into host DNA
B0909_23690	COG4974	Belongs to the 'phage' integrase family
B0909_23740	COG1192	Involved in chromosome partitioning
B0909_23890	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
B0909_23910	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
B0909_23950	COG0640	Transcriptional regulator
B0909_23955	COG1475	DNA binding
B0909_23960	COG1192	Involved in chromosome partitioning
B0909_23965	COG3916	Acyl-homoserine-lactone synthase
B0909_23970	COG4962	Type ii secretion system protein e
B0909_23975	COG3838	Conjugal transfer protein Trbc
B0909_23980	COG5268	conjugation
B0909_23985	COG3451	type IV secretory pathway VirB4
B0909_23990	COG5314	conjugation
B0909_24000	COG3846	protein secretion by the type IV secretion system
B0909_24005	COG3701	Conjugal transfer protein
B0909_24010	COG3504	Conjugal transfer protein
B0909_24020	COG2948	multi-organism process
B0909_24025	COG2771	luxR family
B0909_24045	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
B0909_24050	COG4959	Type IV secretory pathway protease TraF
B0909_24055	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
B0909_24070	COG3505	Type IV secretory pathway VirD4
B0909_24085	COG0840	transmembrane signaling receptor activity
B0909_24090	COG1879	ABC-type sugar transport system periplasmic component
B0909_24100	COG3831	ATPase activity
B0909_24105	COG5489	Protein of unknown function (DUF736)
B0909_24110	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
B0909_24115	COG4227	nucleotidyltransferase activity
B0909_24155	COG1475	DNA binding
B0909_24190	COG1396	sequence-specific DNA binding
B0909_24200	COG0149	triose-phosphate isomerase activity
B0909_24205	COG0191	fructose-bisphosphate aldolase activity
B0909_24215	COG0840	transmembrane signaling receptor activity
B0909_24215	COG2972	Histidine kinase
B0909_24220	COG0563	adenylate kinase activity
B0909_24225	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
B0909_24235	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
B0909_24250	COG1172	Belongs to the binding-protein-dependent transport system permease family
B0909_24260	COG1879	ABC-type sugar transport system periplasmic component
B0909_24270	COG1940	carbohydrate kinase activity
B0909_24275	COG0840	transmembrane signaling receptor activity
B0909_24275	COG2972	Histidine kinase
B0909_24280	COG1349	DNA-binding transcription factor activity
B0909_24300	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
B0909_24305	COG1349	DNA-binding transcription factor activity
B0909_24310	COG4172	Belongs to the ABC transporter superfamily
B0909_24315	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_24330	COG0154	amidase activity
B0909_24340	COG4303	Ethanolamine ammonia lyase large subunit
B0909_24345	COG4302	ethanolamine ammonia-lyase activity
B0909_24405	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
B0909_24415	COG1228	amidohydrolase
B0909_24425	COG1177	transmembrane transport
B0909_24430	COG1176	ABC-type spermidine putrescine transport system, permease component I
B0909_24435	COG3842	ATPase activity
B0909_24470	COG0145	ligase activity
B0909_24485	COG0765	amino acid transport
B0909_24775	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
B0909_24785	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
B0909_24790	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
B0909_24800	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
B0909_24825	COG0583	DNA-binding transcription factor activity
B0909_24830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
B0909_24835	COG0725	ABC transporter, periplasmic molybdate-binding protein
B0909_24840	COG4149	molybdate abc transporter
B0909_24845	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
B0909_24855	COG3191	aminopeptidase activity
B0909_24860	COG2022	thiamine diphosphate biosynthetic process
B0909_24875	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
B0909_24880	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
B0909_24890	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
B0909_24915	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
B0909_24915	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
B0909_24940	COG0438	transferase activity, transferring glycosyl groups
B0909_24960	COG4166	transmembrane transport
B0909_24965	COG0601	transmembrane transport
B0909_24970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
B0909_24985	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
B0909_24990	COG3142	Participates in the control of copper homeostasis
B0909_24995	COG2814	Major facilitator Superfamily
B0909_25010	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_25015	COG1737	Transcriptional regulator
B0909_25025	COG3842	ATPase activity
B0909_25035	COG0395	ABC-type sugar transport system, permease component
B0909_25040	COG1175	transmembrane transport
B0909_25065	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
B0909_25070	COG1940	carbohydrate kinase activity
B0909_25080	COG0671	phosphoesterase, PA-phosphatase related
B0909_25085	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
B0909_25090	COG0156	8-amino-7-oxononanoate synthase activity
B0909_25100	COG0729	surface antigen
B0909_25110	COG0835	chemotaxis
B0909_25120	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
B0909_25125	COG0355	proton-transporting ATP synthase activity, rotational mechanism
B0909_25130	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
B0909_25135	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
B0909_25140	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
B0909_25145	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
B0909_25160	COG4974	Belongs to the 'phage' integrase family
B0909_25185	COG1280	lysine exporter protein (LysE YggA)
B0909_25195	COG0508	dehydrogenase complex catalyzes the overall conversion of
B0909_25200	COG0567	Dehydrogenase, E1 component
B0909_25205	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
B0909_25210	COG0045	succinate-CoA ligase (ADP-forming) activity
B0909_25215	COG0039	L-malate dehydrogenase activity
B0909_25220	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
B0909_25260	COG2264	protein methyltransferase activity
B0909_25275	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
B0909_25280	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
B0909_25285	COG0181	hydroxymethylbilane synthase activity
B0909_25320	COG1872	DUF167
B0909_25325	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
B0909_25340	COG0339	signal peptide processing
B0909_25350	COG1846	Transcriptional regulator
B0909_25355	COG2814	Major facilitator Superfamily
B0909_25360	COG0137	argininosuccinate synthase activity
B0909_25370	COG1280	lysine exporter protein (LysE YggA)
B0909_25375	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
B0909_25380	COG4120	Belongs to the binding-protein-dependent transport system permease family
B0909_25390	COG0820	rRNA (adenine-C2-)-methyltransferase activity
B0909_25405	COG2154	pterin-4-alpha-carbinolamine dehydratase
B0909_25410	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
B0909_25415	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
B0909_25425	COG4181	ATPase activity
B0909_25435	COG0670	Belongs to the BI1 family
B0909_25450	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
B0909_25455	COG4133	protoheme IX ABC transporter activity
B0909_25465	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
B0909_25470	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
B0909_25485	COG3706	GGDEF domain
B0909_25495	COG2917	probably involved in intracellular septation
B0909_25500	COG0552	protein localization to endoplasmic reticulum
B0909_25505	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
B0909_25510	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
B0909_25525	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
B0909_25530	COG0287	Prephenate dehydrogenase
B0909_25530	COG1605	Chorismate mutase
B0909_25535	COG0228	four-way junction DNA binding
B0909_25540	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
B0909_25545	COG0336	Belongs to the RNA methyltransferase TrmD family
B0909_25555	COG0335	large ribosomal subunit rRNA binding
B0909_25565	COG0765	amino acid transport
B0909_25580	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
B0909_25595	COG4783	chaperone-mediated protein folding
B0909_25605	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
B0909_25635	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
B0909_25645	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
B0909_25650	COG0142	geranyltranstransferase activity
B0909_25655	COG2885	chlorophyll binding
B0909_25660	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
B0909_25665	COG2223	nitrite transmembrane transporter activity
B0909_25670	COG1349	DNA-binding transcription factor activity
B0909_25675	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
B0909_25680	COG2197	response regulator
B0909_25685	COG1132	(ABC) transporter
B0909_25695	COG3459	Glycosyltransferase 36 associated
B0909_25700	COG1473	amidohydrolase
B0909_25710	COG0579	oxidoreductase
B0909_25720	COG0129	dihydroxy-acid dehydratase activity
B0909_25725	COG2084	Dehydrogenase
B0909_25730	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
B0909_25735	COG0277	FAD linked oxidase domain protein
B0909_25740	COG2186	Transcriptional regulator
B0909_25750	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
B0909_25755	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
B0909_25760	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
B0909_25765	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
B0909_25775	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
B0909_25780	COG0495	leucyl-tRNA aminoacylation
B0909_25800	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
B0909_25815	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
B0909_25820	COG1946	Acyl-CoA thioesterase
B0909_25825	COG0347	Belongs to the P(II) protein family
B0909_25830	COG0004	ammonium transporteR
B0909_25835	COG1674	ftsk spoiiie
B0909_25840	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
B0909_25855	COG0745	RESPONSE REGULATOR receiver
B0909_25865	COG1329	Transcriptional regulator
B0909_25870	COG2902	Dehydrogenase
B0909_25875	COG2270	Major facilitator Superfamily
B0909_25890	COG1028	Short-chain dehydrogenase reductase Sdr
B0909_25905	COG0494	nUDIX hydrolase
B0909_25915	COG0793	Belongs to the peptidase S41A family
B0909_25925	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
B0909_25930	COG0799	negative regulation of ribosome biogenesis
B0909_25935	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
B0909_25940	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
B0909_25945	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
B0909_25950	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
B0909_25965	COG0211	Belongs to the bacterial ribosomal protein bL27 family
B0909_25970	COG0261	This protein binds to 23S rRNA in the presence of protein L20
B0909_25995	COG0066	3-isopropylmalate dehydratase activity
B0909_26000	COG0473	3-isopropylmalate dehydrogenase activity
B0909_26005	COG1858	cytochrome C peroxidase
B0909_26010	COG1797	cobyrinic acid a,c-diamide synthase activity
B0909_26015	COG1648	precorrin-2 dehydrogenase activity
B0909_26015	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
B0909_26020	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
B0909_26085	COG1492	cobalamin metabolic process
B0909_26100	COG4948	Mandelate Racemase Muconate Lactonizing
B0909_26105	COG3254	rhamnose metabolic process
B0909_26110	COG0246	Mannitol dehydrogenase
B0909_26115	COG1063	alcohol dehydrogenase
B0909_26135	COG4214	carbohydrate transport
B0909_26140	COG1129	ABC transporter
B0909_26145	COG2186	Transcriptional regulator
B0909_26150	COG2721	sulfolactate sulfo-lyase activity
B0909_26155	COG0138	bifunctional purine biosynthesis protein purh
B0909_26165	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
B0909_26165	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
B0909_26170	COG0501	Belongs to the peptidase M48B family
B0909_26180	COG1475	DNA binding
B0909_26185	COG1192	Involved in chromosome partitioning
B0909_26190	COG0357	Ribosomal RNA small subunit methyltransferase G
B0909_26195	COG0445	tRNA wobble uridine modification
B0909_26200	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
B0909_26205	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
B0909_26215	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
B0909_26225	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
B0909_26230	COG0424	maF-like protein
B0909_26235	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
B0909_26240	COG0237	dephospho-CoA kinase activity
B0909_26250	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
B0909_26255	COG3030	protein affecting phage T7 exclusion by the F plasmid
B0909_26265	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
B0909_26280	COG0187	DNA topoisomerase II activity
B0909_26290	COG0179	Fumarylacetoacetate (FAA) hydrolase
B0909_26305	COG0135	phosphoribosylanthranilate isomerase activity
B0909_26310	COG0133	tryptophan synthase activity
B0909_26315	COG0159	tryptophan synthase activity
B0909_26320	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
B0909_26335	COG1074	ATP-dependent DNA helicase activity
B0909_26345	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
B0909_26355	COG2205	protein histidine kinase activity
B0909_26365	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
B0909_26370	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
B0909_26375	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
B0909_26375	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
B0909_26380	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
B0909_26385	COG0642	Histidine kinase
B0909_26390	COG0745	RESPONSE REGULATOR receiver
B0909_26395	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
B0909_26405	COG1652	LysM domain
B0909_26410	COG1072	(Pantothenic acid kinase))
B0909_26415	COG0140	phosphoribosyl-ATP diphosphatase activity
B0909_26420	COG0107	imidazoleglycerol-phosphate synthase activity
B0909_26425	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
B0909_26430	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
B0909_26440	COG0131	Imidazoleglycerol-phosphate dehydratase
B0909_26445	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
B0909_26450	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
B0909_26460	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
B0909_26475	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
B0909_26485	COG1643	Atp-dependent helicase