locus-tag class description F3X89_00005 PF08299 Bacterial dnaA protein helix-turn-helix F3X89_00005 PF11638 DnaA N-terminal domain F3X89_00005 PF00308 Bacterial dnaA protein F3X89_00015 PF03466 LysR substrate binding domain F3X89_00015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_00020 PF00892 EamA-like transporter family F3X89_00025 PF04055 Radical SAM superfamily F3X89_00025 PF06969 HemN C-terminal domain F3X89_00030 PF01725 Ham1 family F3X89_00040 PF03725 3' exoribonuclease family, domain 2 F3X89_00040 PF01138 3' exoribonuclease family, domain 1 F3X89_00045 PF01628 HrcA protein C terminal domain F3X89_00055 PF01025 GrpE F3X89_00060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3X89_00065 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F3X89_00065 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus F3X89_00070 PF04963 Sigma-54 factor, core binding domain F3X89_00070 PF00309 Sigma-54 factor, Activator interacting domain (AID) F3X89_00070 PF04552 Sigma-54, DNA binding domain F3X89_00075 PF00005 ABC transporter F3X89_00080 PF03968 OstA-like protein F3X89_00090 PF01343 Peptidase family S49 F3X89_00095 PF00216 Bacterial DNA-binding protein F3X89_00105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_00105 PF08447 PAS fold F3X89_00105 PF13426 PAS domain F3X89_00110 PF00583 Acetyltransferase (GNAT) family F3X89_00120 PF17785 PUA-like domain F3X89_00120 PF10672 S-adenosylmethionine-dependent methyltransferase F3X89_00125 PF00588 SpoU rRNA Methylase family F3X89_00125 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3X89_00130 PF01252 Signal peptidase (SPase) II F3X89_00135 PF00672 HAMP domain F3X89_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_00135 PF00512 His Kinase A (phospho-acceptor) domain F3X89_00135 PF01627 Hpt domain F3X89_00135 PF00072 Response regulator receiver domain F3X89_00135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F3X89_00150 PF00390 Malic enzyme, N-terminal domain F3X89_00150 PF03949 Malic enzyme, NAD binding domain F3X89_00150 PF01515 Phosphate acetyl/butaryl transferase F3X89_00155 PF05192 MutS domain III F3X89_00155 PF00488 MutS domain V F3X89_00155 PF01624 MutS domain I F3X89_00155 PF05190 MutS family domain IV F3X89_00155 PF05188 MutS domain II F3X89_00165 PF01909 Nucleotidyltransferase domain F3X89_00165 PF01966 HD domain F3X89_00165 PF08335 GlnD PII-uridylyltransferase F3X89_00165 PF01842 ACT domain F3X89_00170 PF03023 Lipid II flippase MurJ F3X89_00185 PF00579 tRNA synthetases class I (W and Y) F3X89_00195 PF01106 NifU-like domain F3X89_00200 PF00814 Glycoprotease family F3X89_00210 PF01475 Ferric uptake regulator family F3X89_00215 PF01553 Acyltransferase F3X89_00220 PF01938 TRAM domain F3X89_00220 PF04055 Radical SAM superfamily F3X89_00220 PF00919 Uncharacterized protein family UPF0004 F3X89_00225 PF02562 PhoH-like protein F3X89_00230 PF02130 Uncharacterized protein family UPF0054 F3X89_00235 PF03471 Transporter associated domain F3X89_00235 PF00571 CBS domain F3X89_00240 PF00795 Carbon-nitrogen hydrolase F3X89_00245 PF01381 Helix-turn-helix F3X89_00250 PF02773 S-adenosylmethionine synthetase, C-terminal domain F3X89_00250 PF02772 S-adenosylmethionine synthetase, central domain F3X89_00250 PF00438 S-adenosylmethionine synthetase, N-terminal domain F3X89_00255 PF02390 Putative methyltransferase F3X89_00265 PF00011 Hsp20/alpha crystallin family F3X89_00270 PF01156 Inosine-uridine preferring nucleoside hydrolase F3X89_00275 PF00672 HAMP domain F3X89_00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_00280 PF00294 pfkB family carbohydrate kinase F3X89_00290 PF01327 Polypeptide deformylase F3X89_00300 PF01850 PIN domain F3X89_00305 PF00551 Formyl transferase F3X89_00305 PF02911 Formyl transferase, C-terminal domain F3X89_00310 PF01416 tRNA pseudouridine synthase F3X89_00315 PF06039 Malate:quinone oxidoreductase (Mqo) F3X89_00325 PF07687 Peptidase dimerisation domain F3X89_00325 PF01546 Peptidase family M20/M25/M40 F3X89_00330 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_00330 PF14602 Hexapeptide repeat of succinyl-transferase F3X89_00330 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F3X89_00340 PF13202 EF hand F3X89_00340 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3X89_00355 PF03466 LysR substrate binding domain F3X89_00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_00360 PF00106 short chain dehydrogenase F3X89_00365 PF00696 Amino acid kinase family F3X89_00380 PF02469 Fasciclin domain F3X89_00385 PF01926 50S ribosome-binding GTPase F3X89_00390 PF12833 Helix-turn-helix domain F3X89_00390 PF06445 GyrI-like small molecule binding domain F3X89_00400 PF02096 60Kd inner membrane protein F3X89_00400 PF14849 YidC periplasmic domain F3X89_00405 PF00825 Ribonuclease P F3X89_00410 PF00468 Ribosomal protein L34 F3X89_00415 PF00672 HAMP domain F3X89_00415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_00420 PF00512 His Kinase A (phospho-acceptor) domain F3X89_00435 PF07690 Major Facilitator Superfamily F3X89_00440 PF01638 HxlR-like helix-turn-helix F3X89_00460 PF07690 Major Facilitator Superfamily F3X89_00470 PF07886 BA14K-like protein F3X89_00475 PF00106 short chain dehydrogenase F3X89_00480 PF00398 Ribosomal RNA adenine dimethylase F3X89_00485 PF00440 Bacterial regulatory proteins, tetR family F3X89_00485 PF16925 Tetracyclin repressor-like, C-terminal domain F3X89_00490 PF03466 LysR substrate binding domain F3X89_00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_00495 PF00106 short chain dehydrogenase F3X89_00500 PF00248 Aldo/keto reductase family F3X89_00510 PF01266 FAD dependent oxidoreductase F3X89_00520 PF05544 Proline racemase F3X89_00535 PF13407 Periplasmic binding protein domain F3X89_00540 PF02653 Branched-chain amino acid transport system / permease component F3X89_00545 PF00005 ABC transporter F3X89_00550 PF00485 Phosphoribulokinase / Uridine kinase family F3X89_00555 PF01979 Amidohydrolase family F3X89_00565 PF00156 Phosphoribosyl transferase domain F3X89_00570 PF00294 pfkB family carbohydrate kinase F3X89_00575 PF00342 Phosphoglucose isomerase F3X89_00580 PF00501 AMP-binding enzyme F3X89_00580 PF13193 AMP-binding enzyme C-terminal domain F3X89_00590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_00595 PF03795 YCII-related domain F3X89_00600 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_00605 PF00005 ABC transporter F3X89_00610 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_00615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3X89_00620 PF03466 LysR substrate binding domain F3X89_00620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_00660 PF03976 Polyphosphate kinase 2 (PPK2) F3X89_00665 PF00512 His Kinase A (phospho-acceptor) domain F3X89_00665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_00665 PF16736 Single Cache-like F3X89_00665 PF00989 PAS fold F3X89_00675 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_00680 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_00685 PF00005 ABC transporter F3X89_00690 PF01895 PhoU domain F3X89_00695 PF00486 Transcriptional regulatory protein, C terminal F3X89_00695 PF00072 Response regulator receiver domain F3X89_00710 PF00202 Aminotransferase class-III F3X89_00715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3X89_00715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3X89_00720 PF01430 Hsp33 protein F3X89_00725 PF04379 ApaG domain F3X89_00730 PF01053 Cys/Met metabolism PLP-dependent enzyme F3X89_00735 PF00692 dUTPase F3X89_00745 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_00765 PF01726 LexA DNA binding domain F3X89_00765 PF00717 Peptidase S24-like F3X89_00780 PF01180 Dihydroorotate dehydrogenase F3X89_00785 PF01554 MatE F3X89_00805 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F3X89_00805 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F3X89_00815 PF00120 Glutamine synthetase, catalytic domain F3X89_00815 PF03951 Glutamine synthetase, beta-Grasp domain F3X89_00820 PF02627 Carboxymuconolactone decarboxylase family F3X89_00825 PF02082 Transcriptional regulator F3X89_00830 PF00270 DEAD/DEAH box helicase F3X89_00830 PF08494 DEAD/H associated F3X89_00830 PF00271 Helicase conserved C-terminal domain F3X89_00845 PF01638 HxlR-like helix-turn-helix F3X89_00855 PF01925 Sulfite exporter TauE/SafE F3X89_00870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3X89_00870 PF12806 Acetyl-CoA dehydrogenase C-terminal like F3X89_00870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_00870 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_00875 PF02803 Thiolase, C-terminal domain F3X89_00875 PF00108 Thiolase, N-terminal domain F3X89_00880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3X89_00880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3X89_00880 PF00378 Enoyl-CoA hydratase/isomerase F3X89_00895 PF01741 Large-conductance mechanosensitive channel, MscL F3X89_00900 PF00155 Aminotransferase class I and II F3X89_00905 PF01370 NAD dependent epimerase/dehydratase family F3X89_00920 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_00920 PF00005 ABC transporter F3X89_00925 PF00005 ABC transporter F3X89_00930 PF02653 Branched-chain amino acid transport system / permease component F3X89_00935 PF02653 Branched-chain amino acid transport system / permease component F3X89_00940 PF00732 GMC oxidoreductase F3X89_00940 PF05199 GMC oxidoreductase F3X89_00945 PF00378 Enoyl-CoA hydratase/isomerase F3X89_00950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_00950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3X89_00955 PF00580 UvrD/REP helicase N-terminal domain F3X89_00955 PF13361 UvrD-like helicase C-terminal domain F3X89_00965 PF02355 Protein export membrane protein F3X89_00965 PF07549 SecD/SecF GG Motif F3X89_00975 PF00999 Sodium/hydrogen exchanger family F3X89_00975 PF02254 TrkA-N domain F3X89_00985 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase F3X89_00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_01000 PF00072 Response regulator receiver domain F3X89_01005 PF01627 Hpt domain F3X89_01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_01005 PF02895 Signal transducing histidine kinase, homodimeric domain F3X89_01005 PF01584 CheW-like domain F3X89_01010 PF01584 CheW-like domain F3X89_01015 PF03705 CheR methyltransferase, all-alpha domain F3X89_01015 PF01739 CheR methyltransferase, SAM binding domain F3X89_01020 PF00072 Response regulator receiver domain F3X89_01020 PF01339 CheB methylesterase F3X89_01025 PF00072 Response regulator receiver domain F3X89_01030 PF03975 CheD chemotactic sensory transduction F3X89_01040 PF08345 Flagellar M-ring protein C-terminal F3X89_01040 PF01514 Secretory protein of YscJ/FliF family F3X89_01045 PF00196 Bacterial regulatory proteins, luxR family F3X89_01045 PF03472 Autoinducer binding domain F3X89_01060 PF01312 FlhB HrpN YscU SpaS Family F3X89_01065 PF14841 FliG middle domain F3X89_01065 PF14842 FliG N-terminal domain F3X89_01065 PF01706 FliG C-terminal domain F3X89_01070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3X89_01075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3X89_01080 PF01618 MotA/TolQ/ExbB proton channel family F3X89_01085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3X89_01085 PF00460 Flagella basal body rod protein F3X89_01090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3X89_01090 PF18269 T3SS EscN ATPase C-terminal domain F3X89_01100 PF00460 Flagella basal body rod protein F3X89_01105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3X89_01110 PF02049 Flagellar hook-basal body complex protein FliE F3X89_01115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3X89_01115 PF00460 Flagella basal body rod protein F3X89_01120 PF13144 Chaperone for flagella basal body P-ring formation F3X89_01125 PF02119 Flagellar P-ring protein F3X89_01135 PF02107 Flagellar L-ring protein F3X89_01145 PF00813 FliP family F3X89_01160 PF00669 Bacterial flagellin N-terminal helical region F3X89_01160 PF00700 Bacterial flagellin C-terminal helical region F3X89_01165 PF00669 Bacterial flagellin N-terminal helical region F3X89_01165 PF00700 Bacterial flagellin C-terminal helical region F3X89_01175 PF00282 Pyridoxal-dependent decarboxylase conserved domain F3X89_01180 PF00669 Bacterial flagellin N-terminal helical region F3X89_01180 PF00700 Bacterial flagellin C-terminal helical region F3X89_01185 PF00669 Bacterial flagellin N-terminal helical region F3X89_01185 PF00700 Bacterial flagellin C-terminal helical region F3X89_01195 PF13677 Membrane MotB of proton-channel complex MotA/MotB F3X89_01195 PF00691 OmpA family F3X89_01205 PF02120 Flagellar hook-length control protein FliK F3X89_01215 PF00486 Transcriptional regulatory protein, C terminal F3X89_01220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3X89_01220 PF00460 Flagella basal body rod protein F3X89_01220 PF07559 Flagellar basal body protein FlaE F3X89_01240 PF07378 Flagellar protein FlbT F3X89_01250 PF01313 Bacterial export proteins, family 3 F3X89_01255 PF00771 FHIPEP family F3X89_01260 PF01311 Bacterial export proteins, family 1 F3X89_01295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F3X89_01295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F3X89_01300 PF00356 Bacterial regulatory proteins, lacI family F3X89_01305 PF01547 Bacterial extracellular solute-binding protein F3X89_01310 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_01315 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_01320 PF00128 Alpha amylase, catalytic domain F3X89_01325 PF03459 TOBE domain F3X89_01325 PF00005 ABC transporter F3X89_01325 PF17912 MalK OB fold domain F3X89_01335 PF17754 MftR C-terminal domain F3X89_01335 PF00440 Bacterial regulatory proteins, tetR family F3X89_01345 PF00920 Dehydratase family F3X89_01350 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F3X89_01355 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F3X89_01355 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F3X89_01360 PF01266 FAD dependent oxidoreductase F3X89_01365 PF00120 Glutamine synthetase, catalytic domain F3X89_01380 PF00672 HAMP domain F3X89_01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_01395 PF13416 Bacterial extracellular solute-binding protein F3X89_01400 PF08402 TOBE domain F3X89_01400 PF00005 ABC transporter F3X89_01405 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_01410 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_01420 PF13193 AMP-binding enzyme C-terminal domain F3X89_01420 PF00501 AMP-binding enzyme F3X89_01425 PF00270 DEAD/DEAH box helicase F3X89_01425 PF00271 Helicase conserved C-terminal domain F3X89_01435 PF13426 PAS domain F3X89_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_01435 PF00989 PAS fold F3X89_01435 PF00512 His Kinase A (phospho-acceptor) domain F3X89_01435 PF13188 PAS domain F3X89_01455 PF00171 Aldehyde dehydrogenase family F3X89_01465 PF05987 Bacterial protein of unknown function (DUF898) F3X89_01475 PF02082 Transcriptional regulator F3X89_01480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_01485 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_01490 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_01490 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_01495 PF00005 ABC transporter F3X89_01495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_01500 PF00005 ABC transporter F3X89_01500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_01505 PF01202 Shikimate kinase F3X89_01510 PF01266 FAD dependent oxidoreductase F3X89_01515 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family F3X89_01520 PF00195 Chalcone and stilbene synthases, N-terminal domain F3X89_01520 PF02797 Chalcone and stilbene synthases, C-terminal domain F3X89_01530 PF04542 Sigma-70 region 2 F3X89_01530 PF08281 Sigma-70, region 4 F3X89_01545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_01545 PF03466 LysR substrate binding domain F3X89_01550 PF02541 Ppx/GppA phosphatase family F3X89_01555 PF01728 FtsJ-like methyltransferase F3X89_01565 PF07690 Major Facilitator Superfamily F3X89_01575 PF00478 IMP dehydrogenase / GMP reductase domain F3X89_01575 PF00571 CBS domain F3X89_01595 PF03466 LysR substrate binding domain F3X89_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_01610 PF00005 ABC transporter F3X89_01630 PF04107 Glutamate-cysteine ligase family 2(GCS2) F3X89_01640 PF04452 RNA methyltransferase F3X89_01645 PF01384 Phosphate transporter family F3X89_01655 PF03466 LysR substrate binding domain F3X89_01655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_01660 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F3X89_01660 PF05221 S-adenosyl-L-homocysteine hydrolase F3X89_01665 PF03466 LysR substrate binding domain F3X89_01665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_01670 PF01565 FAD binding domain F3X89_01670 PF02913 FAD linked oxidases, C-terminal domain F3X89_01675 PF01565 FAD binding domain F3X89_01680 PF13183 4Fe-4S dicluster domain F3X89_01680 PF02754 Cysteine-rich domain F3X89_01695 PF17969 L,D-transpeptidase C-terminal domain F3X89_01695 PF01476 LysM domain F3X89_01695 PF03734 L,D-transpeptidase catalytic domain F3X89_01700 PF03734 L,D-transpeptidase catalytic domain F3X89_01700 PF17969 L,D-transpeptidase C-terminal domain F3X89_01705 PF03352 Methyladenine glycosylase F3X89_01720 PF00248 Aldo/keto reductase family F3X89_01725 PF14765 Polyketide synthase dehydratase F3X89_01725 PF16197 Ketoacyl-synthetase C-terminal extension F3X89_01725 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_01725 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_01725 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_01725 PF00550 Phosphopantetheine attachment site F3X89_01725 PF00698 Acyl transferase domain F3X89_01725 PF00107 Zinc-binding dehydrogenase F3X89_01725 PF08659 KR domain F3X89_01730 PF03466 LysR substrate binding domain F3X89_01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_01755 PF03129 Anticodon binding domain F3X89_01755 PF13393 Histidyl-tRNA synthetase F3X89_01760 PF13393 Histidyl-tRNA synthetase F3X89_01765 PF01634 ATP phosphoribosyltransferase F3X89_01780 PF07681 DoxX F3X89_01785 PF02798 Glutathione S-transferase, N-terminal domain F3X89_01785 PF00043 Glutathione S-transferase, C-terminal domain F3X89_01795 PF00118 TCP-1/cpn60 chaperonin family F3X89_01800 PF00166 Chaperonin 10 Kd subunit F3X89_01815 PF01687 Riboflavin kinase F3X89_01815 PF06574 FAD synthetase F3X89_01820 PF07730 Histidine kinase F3X89_01820 PF17200 Single Cache domain 2 F3X89_01825 PF00072 Response regulator receiver domain F3X89_01825 PF00196 Bacterial regulatory proteins, luxR family F3X89_01835 PF00474 Sodium:solute symporter family F3X89_01840 PF00133 tRNA synthetases class I (I, L, M and V) F3X89_01840 PF08264 Anticodon-binding domain of tRNA F3X89_01850 PF14437 MafB19-like deaminase F3X89_01855 PF01479 S4 domain F3X89_01855 PF00849 RNA pseudouridylate synthase F3X89_01865 PF01734 Patatin-like phospholipase F3X89_01870 PF02254 TrkA-N domain F3X89_01870 PF00999 Sodium/hydrogen exchanger family F3X89_01875 PF01523 Putative modulator of DNA gyrase F3X89_01880 PF00459 Inositol monophosphatase family F3X89_01890 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F3X89_01895 PF13419 Haloacid dehalogenase-like hydrolase F3X89_01900 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F3X89_01910 PF08676 MutL C terminal dimerisation domain F3X89_01910 PF01119 DNA mismatch repair protein, C-terminal domain F3X89_01915 PF00486 Transcriptional regulatory protein, C terminal F3X89_01915 PF00072 Response regulator receiver domain F3X89_01920 PF00990 Diguanylate cyclase, GGDEF domain F3X89_01920 PF03707 Bacterial signalling protein N terminal repeat F3X89_01920 PF00563 EAL domain F3X89_01920 PF13188 PAS domain F3X89_01925 PF01037 Lrp/AsnC ligand binding domain F3X89_01930 PF00764 Arginosuccinate synthase F3X89_01940 PF08450 SMP-30/Gluconolactonase/LRE-like region F3X89_01945 PF01081 KDPG and KHG aldolase F3X89_01950 PF05035 2-keto-3-deoxy-galactonokinase F3X89_01960 PF09339 IclR helix-turn-helix domain F3X89_01960 PF01614 Bacterial transcriptional regulator F3X89_01965 PF03472 Autoinducer binding domain F3X89_01965 PF00196 Bacterial regulatory proteins, luxR family F3X89_01970 PF10609 NUBPL iron-transfer P-loop NTPase F3X89_01970 PF01883 Iron-sulfur cluster assembly protein F3X89_01975 PF01544 CorA-like Mg2+ transporter protein F3X89_01980 PF02705 K+ potassium transporter F3X89_01990 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter F3X89_01995 PF00119 ATP synthase A chain F3X89_02000 PF00137 ATP synthase subunit C F3X89_02005 PF00430 ATP synthase B/B' CF(0) F3X89_02010 PF00430 ATP synthase B/B' CF(0) F3X89_02020 PF01351 Ribonuclease HII F3X89_02040 PF00994 Probable molybdopterin binding domain F3X89_02045 PF00288 GHMP kinases N terminal domain F3X89_02045 PF08544 GHMP kinases C terminal F3X89_02055 PF00348 Polyprenyl synthetase F3X89_02075 PF07883 Cupin domain F3X89_02075 PF01381 Helix-turn-helix F3X89_02085 PF01202 Shikimate kinase F3X89_02090 PF06965 Na+/H+ antiporter 1 F3X89_02090 PF01343 Peptidase family S49 F3X89_02110 PF02091 Glycyl-tRNA synthetase alpha subunit F3X89_02115 PF04011 LemA family F3X89_02120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3X89_02135 PF02092 Glycyl-tRNA synthetase beta subunit F3X89_02135 PF05746 DALR anticodon binding domain F3X89_02140 PF04463 Protein of unknown function (DUF523) F3X89_02145 PF00672 HAMP domain F3X89_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_02155 PF02844 Phosphoribosylglycinamide synthetase, N domain F3X89_02155 PF02843 Phosphoribosylglycinamide synthetase, C domain F3X89_02155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F3X89_02160 PF16921 Tex protein YqgF-like domain F3X89_02160 PF09371 Tex-like protein N-terminal domain F3X89_02160 PF00575 S1 RNA binding domain F3X89_02160 PF17674 HHH domain F3X89_02185 PF01040 UbiA prenyltransferase family F3X89_02205 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F3X89_02205 PF17854 FtsK alpha domain F3X89_02205 PF09397 Ftsk gamma domain F3X89_02205 PF01580 FtsK/SpoIIIE family F3X89_02210 PF01565 FAD binding domain F3X89_02210 PF02913 FAD linked oxidases, C-terminal domain F3X89_02215 PF03481 Putative GTP-binding controlling metal-binding F3X89_02215 PF01300 Telomere recombination F3X89_02230 PF00848 Ring hydroxylating alpha subunit (catalytic domain) F3X89_02230 PF00355 Rieske [2Fe-2S] domain F3X89_02235 PF00175 Oxidoreductase NAD-binding domain F3X89_02235 PF00970 Oxidoreductase FAD-binding domain F3X89_02235 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_02245 PF07886 BA14K-like protein F3X89_02255 PF12806 Acetyl-CoA dehydrogenase C-terminal like F3X89_02255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3X89_02255 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_02255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_02260 PF00378 Enoyl-CoA hydratase/isomerase F3X89_02265 PF05958 tRNA (Uracil-5-)-methyltransferase F3X89_02270 PF01479 S4 domain F3X89_02270 PF01728 FtsJ-like methyltransferase F3X89_02275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_02275 PF00672 HAMP domain F3X89_02280 PF00990 Diguanylate cyclase, GGDEF domain F3X89_02280 PF03707 Bacterial signalling protein N terminal repeat F3X89_02280 PF00563 EAL domain F3X89_02285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F3X89_02285 PF02779 Transketolase, pyrimidine binding domain F3X89_02285 PF02780 Transketolase, C-terminal domain F3X89_02290 PF05726 Pirin C-terminal cupin domain F3X89_02290 PF02678 Pirin F3X89_02295 PF02609 Exonuclease VII small subunit F3X89_02300 PF00850 Histone deacetylase domain F3X89_02315 PF02632 BioY family F3X89_02320 PF02361 Cobalt transport protein F3X89_02325 PF00005 ABC transporter F3X89_02330 PF06224 Winged helix DNA-binding domain F3X89_02335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F3X89_02335 PF00925 GTP cyclohydrolase II F3X89_02340 PF01264 Chorismate synthase F3X89_02350 PF00300 Histidine phosphatase superfamily (branch 1) F3X89_02360 PF00226 DnaJ domain F3X89_02360 PF01556 DnaJ C terminal domain F3X89_02360 PF00684 DnaJ central domain F3X89_02370 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F3X89_02370 PF01243 Pyridoxamine 5'-phosphate oxidase F3X89_02380 PF00768 D-alanyl-D-alanine carboxypeptidase F3X89_02380 PF07943 Penicillin-binding protein 5, C-terminal domain F3X89_02390 PF01523 Putative modulator of DNA gyrase F3X89_02400 PF02790 Cytochrome C oxidase subunit II, transmembrane domain F3X89_02400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3X89_02405 PF00115 Cytochrome C and Quinol oxidase polypeptide I F3X89_02410 PF01040 UbiA prenyltransferase family F3X89_02415 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 F3X89_02420 PF00510 Cytochrome c oxidase subunit III F3X89_02430 PF01022 Bacterial regulatory protein, arsR family F3X89_02455 PF02104 SURF1 family F3X89_02460 PF02401 LytB protein F3X89_02465 PF01636 Phosphotransferase enzyme family F3X89_02470 PF00075 RNase H F3X89_02485 PF01297 Zinc-uptake complex component A periplasmic F3X89_02490 PF00950 ABC 3 transport family F3X89_02495 PF00005 ABC transporter F3X89_02500 PF08534 Redoxin F3X89_02500 PF00462 Glutaredoxin F3X89_02510 PF02622 Uncharacterized ACR, COG1678 F3X89_02520 PF10005 zinc-ribbon domain F3X89_02520 PF15887 Putative zinc-binding metallo-peptidase F3X89_02525 PF03707 Bacterial signalling protein N terminal repeat F3X89_02525 PF00563 EAL domain F3X89_02525 PF00990 Diguanylate cyclase, GGDEF domain F3X89_02530 PF13302 Acetyltransferase (GNAT) domain F3X89_02535 PF00675 Insulinase (Peptidase family M16) F3X89_02535 PF05193 Peptidase M16 inactive domain F3X89_02540 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_02540 PF14821 Threonine synthase N terminus F3X89_02550 PF13419 Haloacid dehalogenase-like hydrolase F3X89_02560 PF02632 BioY family F3X89_02570 PF00144 Beta-lactamase F3X89_02570 PF11954 Domain of unknown function (DUF3471) F3X89_02590 PF01555 DNA methylase F3X89_02590 PF18755 Restriction Enzyme Adenine Methylase Associated F3X89_02605 PF14815 NUDIX domain F3X89_02605 PF00730 HhH-GPD superfamily base excision DNA repair protein F3X89_02615 PF13462 Thioredoxin F3X89_02620 PF02463 RecF/RecN/SMC N terminal domain F3X89_02625 PF01595 Cyclin M transmembrane N-terminal domain F3X89_02625 PF03471 Transporter associated domain F3X89_02625 PF00571 CBS domain F3X89_02640 PF02896 PEP-utilising enzyme, TIM barrel domain F3X89_02640 PF00391 PEP-utilising enzyme, mobile domain F3X89_02640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F3X89_02685 PF00535 Glycosyl transferase family 2 F3X89_02710 PF13185 GAF domain F3X89_02715 PF01641 SelR domain F3X89_02720 PF01625 Peptide methionine sulfoxide reductase F3X89_02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_02730 PF03466 LysR substrate binding domain F3X89_02740 PF00793 DAHP synthetase I family F3X89_02745 PF02530 Porin subfamily F3X89_02755 PF07690 Major Facilitator Superfamily F3X89_02760 PF03466 LysR substrate binding domain F3X89_02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_02765 PF00009 Elongation factor Tu GTP binding domain F3X89_02770 PF01507 Phosphoadenosine phosphosulfate reductase family F3X89_02775 PF01507 Phosphoadenosine phosphosulfate reductase family F3X89_02780 PF02082 Transcriptional regulator F3X89_02785 PF00654 Voltage gated chloride channel F3X89_02800 PF05199 GMC oxidoreductase F3X89_02800 PF00732 GMC oxidoreductase F3X89_02805 PF00171 Aldehyde dehydrogenase family F3X89_02810 PF13417 Glutathione S-transferase, N-terminal domain F3X89_02810 PF00043 Glutathione S-transferase, C-terminal domain F3X89_02815 PF00440 Bacterial regulatory proteins, tetR family F3X89_02815 PF13977 BetI-type transcriptional repressor, C-terminal F3X89_02830 PF12792 CSS motif domain associated with EAL F3X89_02830 PF00563 EAL domain F3X89_02835 PF00107 Zinc-binding dehydrogenase F3X89_02840 PF07690 Major Facilitator Superfamily F3X89_02855 PF00455 DeoR C terminal sensor domain F3X89_02855 PF08220 DeoR-like helix-turn-helix domain F3X89_02865 PF00043 Glutathione S-transferase, C-terminal domain F3X89_02865 PF02798 Glutathione S-transferase, N-terminal domain F3X89_02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_02885 PF03466 LysR substrate binding domain F3X89_02900 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_02900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3X89_02900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_02905 PF01039 Carboxyl transferase domain F3X89_02915 PF00364 Biotin-requiring enzyme F3X89_02915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_02915 PF02785 Biotin carboxylase C-terminal domain F3X89_02915 PF00289 Biotin carboxylase, N-terminal domain F3X89_02920 PF00682 HMGL-like F3X89_02925 PF00378 Enoyl-CoA hydratase/isomerase F3X89_02945 PF04675 DNA ligase N terminus F3X89_02945 PF04679 ATP dependent DNA ligase C terminal region F3X89_02945 PF01068 ATP dependent DNA ligase domain F3X89_02960 PF02310 B12 binding domain F3X89_02960 PF01642 Methylmalonyl-CoA mutase F3X89_02965 PF01642 Methylmalonyl-CoA mutase F3X89_02970 PF17969 L,D-transpeptidase C-terminal domain F3X89_02970 PF03734 L,D-transpeptidase catalytic domain F3X89_02975 PF17969 L,D-transpeptidase C-terminal domain F3X89_02975 PF03734 L,D-transpeptidase catalytic domain F3X89_02980 PF01047 MarR family F3X89_02985 PF02566 OsmC-like protein F3X89_03000 PF12802 MarR family F3X89_03015 PF05872 Bacterial protein of unknown function (DUF853) F3X89_03030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F3X89_03030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F3X89_03035 PF08241 Methyltransferase domain F3X89_03040 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_03040 PF00107 Zinc-binding dehydrogenase F3X89_03045 PF01063 Amino-transferase class IV F3X89_03050 PF13302 Acetyltransferase (GNAT) domain F3X89_03060 PF00083 Sugar (and other) transporter F3X89_03060 PF07690 Major Facilitator Superfamily F3X89_03065 PF01161 Phosphatidylethanolamine-binding protein F3X89_03095 PF00313 'Cold-shock' DNA-binding domain F3X89_03100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3X89_03100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3X89_03110 PF12833 Helix-turn-helix domain F3X89_03110 PF06719 AraC-type transcriptional regulator N-terminus F3X89_03125 PF01810 LysE type translocator F3X89_03130 PF01322 Cytochrome C' F3X89_03135 PF00034 Cytochrome c F3X89_03140 PF13649 Methyltransferase domain F3X89_03155 PF02583 Metal-sensitive transcriptional repressor F3X89_03160 PF16916 Dimerisation domain of Zinc Transporter F3X89_03160 PF01545 Cation efflux family F3X89_03170 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F3X89_03190 PF00326 Prolyl oligopeptidase family F3X89_03190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F3X89_03205 PF00684 DnaJ central domain F3X89_03205 PF00226 DnaJ domain F3X89_03205 PF01556 DnaJ C terminal domain F3X89_03220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_03225 PF03006 Haemolysin-III related F3X89_03240 PF13244 Domain of unknown function (DUF4040) F3X89_03240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F3X89_03240 PF00361 Proton-conducting membrane transporter F3X89_03245 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter F3X89_03250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F3X89_03255 PF00361 Proton-conducting membrane transporter F3X89_03260 PF01899 Na+/H+ ion antiporter subunit F3X89_03265 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) F3X89_03270 PF03334 Na+/H+ antiporter subunit F3X89_03275 PF05443 ROS/MUCR transcriptional regulator protein F3X89_03280 PF02657 Fe-S metabolism associated domain F3X89_03290 PF00512 His Kinase A (phospho-acceptor) domain F3X89_03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_03325 PF00912 Transglycosylase F3X89_03325 PF00905 Penicillin binding protein transpeptidase domain F3X89_03330 PF03692 Putative zinc- or iron-chelating domain F3X89_03345 PF00072 Response regulator receiver domain F3X89_03345 PF00486 Transcriptional regulatory protein, C terminal F3X89_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_03365 PF03100 CcmE F3X89_03370 PF01578 Cytochrome C assembly protein F3X89_03370 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F3X89_03375 PF03918 Cytochrome C biogenesis protein F3X89_03380 PF13180 PDZ domain F3X89_03385 PF00486 Transcriptional regulatory protein, C terminal F3X89_03385 PF00072 Response regulator receiver domain F3X89_03390 PF00512 His Kinase A (phospho-acceptor) domain F3X89_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_03395 PF08335 GlnD PII-uridylyltransferase F3X89_03395 PF03710 Glutamate-ammonia ligase adenylyltransferase F3X89_03400 PF00989 PAS fold F3X89_03400 PF00512 His Kinase A (phospho-acceptor) domain F3X89_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_03405 PF01433 Peptidase family M1 domain F3X89_03405 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F3X89_03405 PF11940 Domain of unknown function (DUF3458) Ig-like fold F3X89_03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_03410 PF00672 HAMP domain F3X89_03410 PF17202 Single cache domain 3 F3X89_03430 PF03167 Uracil DNA glycosylase superfamily F3X89_03435 PF00012 Hsp70 protein F3X89_03440 PF00873 AcrB/AcrD/AcrF family F3X89_03445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_03460 PF00583 Acetyltransferase (GNAT) family F3X89_03470 PF01037 Lrp/AsnC ligand binding domain F3X89_03475 PF01769 Divalent cation transporter F3X89_03475 PF00571 CBS domain F3X89_03475 PF03448 MgtE intracellular N domain F3X89_03485 PF01638 HxlR-like helix-turn-helix F3X89_03490 PF07690 Major Facilitator Superfamily F3X89_03495 PF00781 Diacylglycerol kinase catalytic domain F3X89_03500 PF00120 Glutamine synthetase, catalytic domain F3X89_03505 PF00202 Aminotransferase class-III F3X89_03515 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase F3X89_03520 PF00535 Glycosyl transferase family 2 F3X89_03530 PF08281 Sigma-70, region 4 F3X89_03530 PF04542 Sigma-70 region 2 F3X89_03540 PF03795 YCII-related domain F3X89_03555 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus F3X89_03555 PF01048 Phosphorylase superfamily F3X89_03575 PF01694 Rhomboid family F3X89_03580 PF00155 Aminotransferase class I and II F3X89_03605 PF04962 KduI/IolB family F3X89_03610 PF01261 Xylose isomerase-like TIM barrel F3X89_03615 PF00205 Thiamine pyrophosphate enzyme, central domain F3X89_03615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3X89_03615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3X89_03620 PF00294 pfkB family carbohydrate kinase F3X89_03630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_03630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_03635 PF14759 Reductase C-terminal F3X89_03635 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_03775 PF00574 Clp protease F3X89_03925 PF00155 Aminotransferase class I and II F3X89_03925 PF00392 Bacterial regulatory proteins, gntR family F3X89_03940 PF01758 Sodium Bile acid symporter family F3X89_03945 PF03960 ArsC family F3X89_03960 PF02530 Porin subfamily F3X89_03965 PF02530 Porin subfamily F3X89_03975 PF14718 Soluble lytic murein transglycosylase L domain F3X89_03975 PF01464 Transglycosylase SLT domain F3X89_03980 PF00701 Dihydrodipicolinate synthetase family F3X89_03985 PF01668 SmpB protein F3X89_03995 PF01192 RNA polymerase Rpb6 F3X89_04000 PF13291 ACT domain F3X89_04000 PF02824 TGS domain F3X89_04000 PF04607 Region found in RelA / SpoT proteins F3X89_04015 PF01648 4'-phosphopantetheinyl transferase superfamily F3X89_04020 PF10502 Signal peptidase, peptidase S26 F3X89_04025 PF14622 Ribonuclease-III-like F3X89_04025 PF00035 Double-stranded RNA binding motif F3X89_04030 PF01926 50S ribosome-binding GTPase F3X89_04030 PF07650 KH domain F3X89_04040 PF11967 Recombination protein O N terminal F3X89_04040 PF02565 Recombination protein O C terminal F3X89_04050 PF01966 HD domain F3X89_04065 PF00080 Copper/zinc superoxide dismutase (SODC) F3X89_04080 PF01966 HD domain F3X89_04085 PF01571 Aminomethyltransferase folate-binding domain F3X89_04105 PF03099 Biotin/lipoate A/B protein ligase family F3X89_04105 PF00293 NUDIX domain F3X89_04110 PF02694 Uncharacterised BCR, YnfA/UPF0060 family F3X89_04120 PF01066 CDP-alcohol phosphatidyltransferase F3X89_04125 PF02666 Phosphatidylserine decarboxylase F3X89_04130 PF01569 PAP2 superfamily F3X89_04135 PF00664 ABC transporter transmembrane region F3X89_04135 PF00005 ABC transporter F3X89_04145 PF03641 Possible lysine decarboxylase F3X89_04150 PF00892 EamA-like transporter family F3X89_04155 PF00682 HMGL-like F3X89_04155 PF08502 LeuA allosteric (dimerisation) domain F3X89_04160 PF00561 alpha/beta hydrolase fold F3X89_04180 PF01406 tRNA synthetases class I (C) catalytic domain F3X89_04185 PF00106 short chain dehydrogenase F3X89_04190 PF13537 Glutamine amidotransferase domain F3X89_04190 PF00156 Phosphoribosyl transferase domain F3X89_04195 PF02674 Colicin V production protein F3X89_04200 PF18073 Rubredoxin metal binding domain F3X89_04200 PF06745 KaiC F3X89_04205 PF01810 LysE type translocator F3X89_04210 PF00842 Alanine racemase, C-terminal domain F3X89_04210 PF01168 Alanine racemase, N-terminal domain F3X89_04215 PF03796 DnaB-like helicase C terminal domain F3X89_04215 PF00772 DnaB-like helicase N terminal domain F3X89_04230 PF13533 Biotin-lipoyl like F3X89_04235 PF03948 Ribosomal protein L9, C-terminal domain F3X89_04235 PF01281 Ribosomal protein L9, N-terminal domain F3X89_04245 PF01084 Ribosomal protein S18 F3X89_04250 PF01250 Ribosomal protein S6 F3X89_04270 PF00248 Aldo/keto reductase family F3X89_04275 PF00698 Acyl transferase domain F3X89_04285 PF00550 Phosphopantetheine attachment site F3X89_04290 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_04290 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_04295 PF02618 YceG-like family F3X89_04300 PF03755 YicC-like family, N-terminal region F3X89_04300 PF08340 Domain of unknown function (DUF1732) F3X89_04305 PF00625 Guanylate kinase F3X89_04310 PF00398 Ribosomal RNA adenine dimethylase F3X89_04315 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F3X89_04325 PF04453 LPS transport system D F3X89_04325 PF03968 OstA-like protein F3X89_04340 PF01569 PAP2 superfamily F3X89_04345 PF02789 Cytosol aminopeptidase family, N-terminal domain F3X89_04345 PF00883 Cytosol aminopeptidase family, catalytic domain F3X89_04355 PF04229 GrpB protein F3X89_04360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_04370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F3X89_04370 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F3X89_04375 PF03480 Bacterial extracellular solute-binding protein, family 7 F3X89_04380 PF00326 Prolyl oligopeptidase family F3X89_04380 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F3X89_04385 PF01522 Polysaccharide deacetylase F3X89_04390 PF00005 ABC transporter F3X89_04390 PF12848 ABC transporter F3X89_04405 PF00334 Nucleoside diphosphate kinase F3X89_04425 PF02391 MoaE protein F3X89_04435 PF01066 CDP-alcohol phosphatidyltransferase F3X89_04440 PF01541 GIY-YIG catalytic domain F3X89_04440 PF08459 UvrC Helix-hairpin-helix N-terminal F3X89_04440 PF12826 Helix-hairpin-helix motif F3X89_04440 PF02151 UvrB/uvrC motif F3X89_04450 PF13505 Outer membrane protein beta-barrel domain F3X89_04455 PF00043 Glutathione S-transferase, C-terminal domain F3X89_04455 PF13417 Glutathione S-transferase, N-terminal domain F3X89_04460 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F3X89_04465 PF01568 Molydopterin dinucleotide binding domain F3X89_04465 PF00384 Molybdopterin oxidoreductase F3X89_04465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3X89_04470 PF00293 NUDIX domain F3X89_04475 PF07969 Amidohydrolase family F3X89_04480 PF00551 Formyl transferase F3X89_04485 PF00586 AIR synthase related protein, N-terminal domain F3X89_04485 PF02769 AIR synthase related protein, C-terminal domain F3X89_04490 PF01594 AI-2E family transporter F3X89_04500 PF02503 Polyphosphate kinase middle domain F3X89_04500 PF13089 Polyphosphate kinase N-terminal domain F3X89_04500 PF17941 Polyphosphate kinase C-terminal domain 1 F3X89_04500 PF13090 Polyphosphate kinase C-terminal domain 2 F3X89_04505 PF02541 Ppx/GppA phosphatase family F3X89_04515 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_04520 PF01612 3'-5' exonuclease F3X89_04520 PF00570 HRDC domain F3X89_04525 PF00394 Multicopper oxidase F3X89_04525 PF07731 Multicopper oxidase F3X89_04525 PF07732 Multicopper oxidase F3X89_04535 PF02938 GAD domain F3X89_04535 PF01336 OB-fold nucleic acid binding domain F3X89_04535 PF00152 tRNA synthetases class II (D, K and N) F3X89_04540 PF00144 Beta-lactamase F3X89_04555 PF03989 DNA gyrase C-terminal domain, beta-propeller F3X89_04555 PF00521 DNA gyrase/topoisomerase IV, subunit A F3X89_04560 PF02661 Fic/DOC family F3X89_04570 PF00892 EamA-like transporter family F3X89_04575 PF04377 Arginine-tRNA-protein transferase, C terminus F3X89_04575 PF04376 Arginine-tRNA-protein transferase, N terminus F3X89_04585 PF00490 Delta-aminolevulinic acid dehydratase F3X89_04605 PF00464 Serine hydroxymethyltransferase F3X89_04610 PF03477 ATP cone domain F3X89_04615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3X89_04615 PF01872 RibD C-terminal domain F3X89_04620 PF00677 Lumazine binding domain F3X89_04625 PF13673 Acetyltransferase (GNAT) domain F3X89_04640 PF00885 6,7-dimethyl-8-ribityllumazine synthase F3X89_04645 PF01029 NusB family F3X89_04650 PF03030 Inorganic H+ pyrophosphatase F3X89_04670 PF02504 Fatty acid synthesis protein F3X89_04675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F3X89_04675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F3X89_04680 PF00216 Bacterial DNA-binding protein F3X89_04685 PF13411 MerR HTH family regulatory protein F3X89_04695 PF02530 Porin subfamily F3X89_04710 PF07886 BA14K-like protein F3X89_04735 PF01850 PIN domain F3X89_04740 PF07704 Rv0623-like transcription factor F3X89_04750 PF00534 Glycosyl transferases group 1 F3X89_04750 PF13439 Glycosyltransferase Family 4 F3X89_04760 PF02397 Bacterial sugar transferase F3X89_04790 PF02628 Cytochrome oxidase assembly protein F3X89_04800 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3X89_04805 PF00491 Arginase family F3X89_04815 PF07690 Major Facilitator Superfamily F3X89_04820 PF00380 Ribosomal protein S9/S16 F3X89_04825 PF00572 Ribosomal protein L13 F3X89_04840 PF13380 CoA binding domain F3X89_04845 PF01053 Cys/Met metabolism PLP-dependent enzyme F3X89_04850 PF01820 D-ala D-ala ligase N-terminus F3X89_04850 PF07478 D-ala D-ala ligase C-terminus F3X89_04860 PF12849 PBP superfamily domain F3X89_04865 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_04870 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_04875 PF00005 ABC transporter F3X89_04880 PF00067 Cytochrome P450 F3X89_04885 PF07694 5TMR of 5TMR-LYT F3X89_04885 PF00990 Diguanylate cyclase, GGDEF domain F3X89_04890 PF00574 Clp protease F3X89_04895 PF06689 ClpX C4-type zinc finger F3X89_04895 PF10431 C-terminal, D2-small domain, of ClpB protein F3X89_04895 PF07724 AAA domain (Cdc48 subfamily) F3X89_04900 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_04900 PF02190 ATP-dependent protease La (LON) substrate-binding domain F3X89_04900 PF05362 Lon protease (S16) C-terminal proteolytic domain F3X89_04905 PF00216 Bacterial DNA-binding protein F3X89_04915 PF00248 Aldo/keto reductase family F3X89_04920 PF00149 Calcineurin-like phosphoesterase F3X89_04925 PF13514 AAA domain F3X89_04935 PF00535 Glycosyl transferase family 2 F3X89_04960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F3X89_04965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3X89_04970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F3X89_04975 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F3X89_04990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3X89_04990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F3X89_04990 PF10531 SLBB domain F3X89_04995 PF00829 Ribosomal prokaryotic L21 protein F3X89_05000 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal F3X89_05000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F3X89_05000 PF00384 Molybdopterin oxidoreductase F3X89_05005 PF00146 NADH dehydrogenase F3X89_05010 PF12838 4Fe-4S dicluster domain F3X89_05015 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F3X89_05020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F3X89_05025 PF00361 Proton-conducting membrane transporter F3X89_05025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F3X89_05030 PF00361 Proton-conducting membrane transporter F3X89_05030 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus F3X89_05035 PF00361 Proton-conducting membrane transporter F3X89_05040 PF03309 Type III pantothenate kinase F3X89_05040 PF03099 Biotin/lipoate A/B protein ligase family F3X89_05040 PF02237 Biotin protein ligase C terminal domain F3X89_05045 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F3X89_05045 PF17770 Ribonuclease J C-terminal domain F3X89_05045 PF12706 Beta-lactamase superfamily domain F3X89_05060 PF03129 Anticodon binding domain F3X89_05060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3X89_05065 PF12704 MacB-like periplasmic core domain F3X89_05065 PF02687 FtsX-like permease family F3X89_05070 PF00005 ABC transporter F3X89_05085 PF02811 PHP domain F3X89_05085 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3X89_05085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3X89_05085 PF14579 Helix-hairpin-helix motif F3X89_05100 PF00817 impB/mucB/samB family F3X89_05100 PF11799 impB/mucB/samB family C-terminal domain F3X89_05120 PF00072 Response regulator receiver domain F3X89_05125 PF00072 Response regulator receiver domain F3X89_05125 PF00990 Diguanylate cyclase, GGDEF domain F3X89_05130 PF00471 Ribosomal protein L33 F3X89_05135 PF07690 Major Facilitator Superfamily F3X89_05150 PF17876 Cold shock domain F3X89_05150 PF08461 Ribonuclease R winged-helix domain F3X89_05150 PF08206 Ribonuclease B OB domain F3X89_05150 PF00575 S1 RNA binding domain F3X89_05150 PF00773 RNB domain F3X89_05155 PF13368 Topoisomerase C-terminal repeat F3X89_05155 PF01131 DNA topoisomerase F3X89_05155 PF01751 Toprim domain F3X89_05155 PF01396 Topoisomerase DNA binding C4 zinc finger F3X89_05160 PF02481 DNA recombination-mediator protein A F3X89_05160 PF17782 DprA winged helix domain F3X89_05165 PF02660 Glycerol-3-phosphate acyltransferase F3X89_05170 PF01979 Amidohydrolase family F3X89_05175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3X89_05175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3X89_05180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3X89_05180 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_05180 PF18158 Adaptive response protein AidB N-terminal domain F3X89_05185 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F3X89_05190 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F3X89_05195 PF00583 Acetyltransferase (GNAT) family F3X89_05210 PF03652 Holliday junction resolvase F3X89_05220 PF02686 Glu-tRNAGln amidotransferase C subunit F3X89_05225 PF01425 Amidase F3X89_05235 PF09857 Putative toxin of bacterial toxin-antitoxin pair F3X89_05245 PF02934 GatB/GatE catalytic domain F3X89_05245 PF02637 GatB domain F3X89_05265 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) F3X89_05280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F3X89_05285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_05285 PF00289 Biotin carboxylase, N-terminal domain F3X89_05285 PF02785 Biotin carboxylase C-terminal domain F3X89_05290 PF00364 Biotin-requiring enzyme F3X89_05295 PF01220 Dehydroquinase class II F3X89_05305 PF00155 Aminotransferase class I and II F3X89_05310 PF10150 Ribonuclease E/G family F3X89_05310 PF00575 S1 RNA binding domain F3X89_05310 PF12111 Polyribonucleotide phosphorylase C terminal F3X89_05315 PF11741 AMIN domain F3X89_05315 PF01520 N-acetylmuramoyl-L-alanine amidase F3X89_05320 PF17092 Penicillin-binding protein OB-like domain F3X89_05320 PF00912 Transglycosylase F3X89_05320 PF00905 Penicillin binding protein transpeptidase domain F3X89_05330 PF01513 ATP-NAD kinase F3X89_05360 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3X89_05360 PF00588 SpoU rRNA Methylase family F3X89_05380 PF03143 Elongation factor Tu C-terminal domain F3X89_05380 PF03144 Elongation factor Tu domain 2 F3X89_05380 PF00009 Elongation factor Tu GTP binding domain F3X89_05385 PF04229 GrpB protein F3X89_05410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F3X89_05415 PF02357 Transcription termination factor nusG F3X89_05415 PF00467 KOW motif F3X89_05420 PF03946 Ribosomal protein L11, N-terminal domain F3X89_05420 PF00298 Ribosomal protein L11, RNA binding domain F3X89_05425 PF00687 Ribosomal protein L1p/L10e family F3X89_05430 PF00466 Ribosomal protein L10 F3X89_05435 PF16320 Ribosomal protein L7/L12 dimerisation domain F3X89_05435 PF00542 Ribosomal protein L7/L12 C-terminal domain F3X89_05440 PF04563 RNA polymerase beta subunit F3X89_05440 PF04565 RNA polymerase Rpb2, domain 3 F3X89_05440 PF10385 RNA polymerase beta subunit external 1 domain F3X89_05440 PF04561 RNA polymerase Rpb2, domain 2 F3X89_05440 PF04560 RNA polymerase Rpb2, domain 7 F3X89_05440 PF00562 RNA polymerase Rpb2, domain 6 F3X89_05445 PF04998 RNA polymerase Rpb1, domain 5 F3X89_05445 PF04983 RNA polymerase Rpb1, domain 3 F3X89_05445 PF04997 RNA polymerase Rpb1, domain 1 F3X89_05445 PF00623 RNA polymerase Rpb1, domain 2 F3X89_05445 PF05000 RNA polymerase Rpb1, domain 4 F3X89_05455 PF00164 Ribosomal protein S12/S23 F3X89_05460 PF00177 Ribosomal protein S7p/S5e F3X89_05465 PF03764 Elongation factor G, domain IV F3X89_05465 PF14492 Elongation Factor G, domain II F3X89_05465 PF00009 Elongation factor Tu GTP binding domain F3X89_05465 PF00679 Elongation factor G C-terminus F3X89_05465 PF03144 Elongation factor Tu domain 2 F3X89_05470 PF00009 Elongation factor Tu GTP binding domain F3X89_05470 PF03144 Elongation factor Tu domain 2 F3X89_05470 PF03143 Elongation factor Tu C-terminal domain F3X89_05475 PF00338 Ribosomal protein S10p/S20e F3X89_05480 PF00297 Ribosomal protein L3 F3X89_05485 PF00573 Ribosomal protein L4/L1 family F3X89_05490 PF00276 Ribosomal protein L23 F3X89_05495 PF03947 Ribosomal Proteins L2, C-terminal domain F3X89_05495 PF00181 Ribosomal Proteins L2, RNA binding domain F3X89_05500 PF00203 Ribosomal protein S19 F3X89_05505 PF00237 Ribosomal protein L22p/L17e F3X89_05510 PF07650 KH domain F3X89_05510 PF00189 Ribosomal protein S3, C-terminal domain F3X89_05515 PF00252 Ribosomal protein L16p/L10e F3X89_05520 PF00831 Ribosomal L29 protein F3X89_05525 PF00366 Ribosomal protein S17 F3X89_05530 PF00238 Ribosomal protein L14p/L23e F3X89_05535 PF00467 KOW motif F3X89_05535 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F3X89_05540 PF00281 Ribosomal protein L5 F3X89_05540 PF00673 ribosomal L5P family C-terminus F3X89_05545 PF00253 Ribosomal protein S14p/S29e F3X89_05550 PF00410 Ribosomal protein S8 F3X89_05555 PF00347 Ribosomal protein L6 F3X89_05560 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F3X89_05565 PF03719 Ribosomal protein S5, C-terminal domain F3X89_05565 PF00333 Ribosomal protein S5, N-terminal domain F3X89_05570 PF00327 Ribosomal protein L30p/L7e F3X89_05575 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F3X89_05580 PF00344 SecY translocase F3X89_05585 PF05191 Adenylate kinase, active site lid F3X89_05590 PF00416 Ribosomal protein S13/S18 F3X89_05595 PF00411 Ribosomal protein S11 F3X89_05600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F3X89_05600 PF01000 RNA polymerase Rpb3/RpoA insert domain F3X89_05600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F3X89_05605 PF01196 Ribosomal protein L17 F3X89_05610 PF05675 Protein of unknown function (DUF817) F3X89_05620 PF01047 MarR family F3X89_05625 PF04632 Fusaric acid resistance protein family F3X89_05635 PF00529 HlyD membrane-fusion protein of T1SS F3X89_05635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_05640 PF01794 Ferric reductase like transmembrane component F3X89_05645 PF00174 Oxidoreductase molybdopterin binding domain F3X89_05650 PF00920 Dehydratase family F3X89_05660 PF00595 PDZ domain F3X89_05665 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_05665 PF16193 AAA C-terminal domain F3X89_05665 PF12002 MgsA AAA+ ATPase C terminal F3X89_05685 PF00701 Dihydrodipicolinate synthetase family F3X89_05705 PF02558 Ketopantoate reductase PanE/ApbA F3X89_05705 PF08546 Ketopantoate reductase PanE/ApbA C terminal F3X89_05730 PF00005 ABC transporter F3X89_05730 PF12848 ABC transporter F3X89_05735 PF00571 CBS domain F3X89_05735 PF03471 Transporter associated domain F3X89_05735 PF01595 Cyclin M transmembrane N-terminal domain F3X89_05755 PF00403 Heavy-metal-associated domain F3X89_05760 PF13411 MerR HTH family regulatory protein F3X89_05775 PF01613 Flavin reductase like domain F3X89_05780 PF13419 Haloacid dehalogenase-like hydrolase F3X89_05785 PF02867 Ribonucleotide reductase, barrel domain F3X89_05785 PF08471 Class II vitamin B12-dependent ribonucleotide reductase F3X89_05790 PF00156 Phosphoribosyl transferase domain F3X89_05800 PF02464 Competence-damaged protein F3X89_05800 PF00994 Probable molybdopterin binding domain F3X89_05805 PF03358 NADPH-dependent FMN reductase F3X89_05815 PF00834 Ribulose-phosphate 3 epimerase family F3X89_05830 PF00585 C-terminal regulatory domain of Threonine dehydratase F3X89_05830 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_05855 PF02525 Flavodoxin-like fold F3X89_05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_05860 PF03466 LysR substrate binding domain F3X89_05865 PF02872 5'-nucleotidase, C-terminal domain F3X89_05865 PF00149 Calcineurin-like phosphoesterase F3X89_05880 PF01037 Lrp/AsnC ligand binding domain F3X89_05885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3X89_05885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F3X89_05900 PF00581 Rhodanese-like domain F3X89_05905 PF01411 tRNA synthetases class II (A) F3X89_05905 PF02272 DHHA1 domain F3X89_05905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3X89_05910 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_05915 PF00106 short chain dehydrogenase F3X89_05920 PF17912 MalK OB fold domain F3X89_05920 PF00005 ABC transporter F3X89_05925 PF07519 Tannase and feruloyl esterase F3X89_05930 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_05935 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_05940 PF13416 Bacterial extracellular solute-binding protein F3X89_05945 PF14602 Hexapeptide repeat of succinyl-transferase F3X89_05945 PF12464 Maltose acetyltransferase F3X89_05970 PF02530 Porin subfamily F3X89_05990 PF01757 Acyltransferase family F3X89_06005 PF08264 Anticodon-binding domain of tRNA F3X89_06005 PF00133 tRNA synthetases class I (I, L, M and V) F3X89_06005 PF10458 Valyl tRNA synthetase tRNA binding arm F3X89_06015 PF08238 Sel1 repeat F3X89_06025 PF01521 Iron-sulphur cluster biosynthesis F3X89_06030 PF01966 HD domain F3X89_06030 PF13286 Phosphohydrolase-associated domain F3X89_06035 PF03485 Arginyl tRNA synthetase N terminal domain F3X89_06035 PF00750 tRNA synthetases class I (R) F3X89_06035 PF05746 DALR anticodon binding domain F3X89_06045 PF00933 Glycosyl hydrolase family 3 N terminal domain F3X89_06050 PF02616 Segregation and condensation protein ScpA F3X89_06055 PF04079 Segregation and condensation complex subunit ScpB F3X89_06060 PF02416 mttA/Hcf106 family F3X89_06065 PF02416 mttA/Hcf106 family F3X89_06070 PF00902 Sec-independent protein translocase protein (TatC) F3X89_06075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3X89_06075 PF02403 Seryl-tRNA synthetase N-terminal domain F3X89_06080 PF01975 Survival protein SurE F3X89_06090 PF01551 Peptidase family M23 F3X89_06100 PF02699 Preprotein translocase subunit F3X89_06105 PF02355 Protein export membrane protein F3X89_06105 PF07549 SecD/SecF GG Motif F3X89_06125 PF01134 Glucose inhibited division protein A F3X89_06155 PF05698 Bacterial trigger factor protein (TF) C-terminus F3X89_06155 PF05697 Bacterial trigger factor protein (TF) F3X89_06155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3X89_06165 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_06165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3X89_06175 PF04002 RadC-like JAB domain F3X89_06180 PF00557 Metallopeptidase family M24 F3X89_06185 PF03749 Sugar fermentation stimulation protein RE domain F3X89_06185 PF17746 SfsA N-terminal OB domain F3X89_06190 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus F3X89_06200 PF00155 Aminotransferase class I and II F3X89_06205 PF03447 Homoserine dehydrogenase, NAD binding domain F3X89_06205 PF00742 Homoserine dehydrogenase F3X89_06205 PF01842 ACT domain F3X89_06210 PF02272 DHHA1 domain F3X89_06210 PF01368 DHH family F3X89_06210 PF17768 RecJ OB domain F3X89_06285 PF00313 'Cold-shock' DNA-binding domain F3X89_06320 PF01810 LysE type translocator F3X89_06325 PF01037 Lrp/AsnC ligand binding domain F3X89_06335 PF00005 ABC transporter F3X89_06340 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_06345 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_06350 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_06355 PF01053 Cys/Met metabolism PLP-dependent enzyme F3X89_06360 PF01494 FAD binding domain F3X89_06370 PF00561 alpha/beta hydrolase fold F3X89_06375 PF00378 Enoyl-CoA hydratase/isomerase F3X89_06380 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_06380 PF06426 Serine acetyltransferase, N-terminal F3X89_06395 PF02617 ATP-dependent Clp protease adaptor protein ClpS F3X89_06400 PF02861 Clp amino terminal domain, pathogenicity island component F3X89_06400 PF17871 AAA lid domain F3X89_06400 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_06400 PF10431 C-terminal, D2-small domain, of ClpB protein F3X89_06400 PF07724 AAA domain (Cdc48 subfamily) F3X89_06405 PF01230 HIT domain F3X89_06430 PF00318 Ribosomal protein S2 F3X89_06435 PF00889 Elongation factor TS F3X89_06440 PF00696 Amino acid kinase family F3X89_06445 PF01765 Ribosome recycling factor F3X89_06450 PF01255 Putative undecaprenyl diphosphate synthase F3X89_06460 PF17820 PDZ domain F3X89_06460 PF02163 Peptidase family M50 F3X89_06465 PF01103 Surface antigen F3X89_06465 PF07244 Surface antigen variable number repeat F3X89_06470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F3X89_06470 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_06475 PF07977 FabA-like domain F3X89_06480 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_06480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F3X89_06485 PF17930 LpxI N-terminal domain F3X89_06485 PF06230 LpxI C-terminal domain F3X89_06490 PF02684 Lipid-A-disaccharide synthetase F3X89_06495 PF00285 Citrate synthase, C-terminal domain F3X89_06505 PF00717 Peptidase S24-like F3X89_06505 PF01726 LexA DNA binding domain F3X89_06515 PF00793 DAHP synthetase I family F3X89_06520 PF03952 Enolase, N-terminal domain F3X89_06520 PF00113 Enolase, C-terminal TIM barrel domain F3X89_06530 PF00676 Dehydrogenase E1 component F3X89_06535 PF02779 Transketolase, pyrimidine binding domain F3X89_06535 PF00364 Biotin-requiring enzyme F3X89_06535 PF02780 Transketolase, C-terminal domain F3X89_06540 PF02817 e3 binding domain F3X89_06540 PF00364 Biotin-requiring enzyme F3X89_06540 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3X89_06550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3X89_06550 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_06565 PF04055 Radical SAM superfamily F3X89_06565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F3X89_06580 PF03364 Polyketide cyclase / dehydrase and lipid transport F3X89_06585 PF02464 Competence-damaged protein F3X89_06590 PF02542 YgbB family F3X89_06590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F3X89_06595 PF01207 Dihydrouridine synthase (Dus) F3X89_06600 PF00989 PAS fold F3X89_06600 PF00512 His Kinase A (phospho-acceptor) domain F3X89_06600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_06605 PF00158 Sigma-54 interaction domain F3X89_06605 PF00072 Response regulator receiver domain F3X89_06605 PF02954 Bacterial regulatory protein, Fis family F3X89_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_06610 PF00989 PAS fold F3X89_06610 PF00672 HAMP domain F3X89_06610 PF00512 His Kinase A (phospho-acceptor) domain F3X89_06615 PF00072 Response regulator receiver domain F3X89_06615 PF00158 Sigma-54 interaction domain F3X89_06615 PF02954 Bacterial regulatory protein, Fis family F3X89_06620 PF01063 Amino-transferase class IV F3X89_06625 PF17209 Hfq protein F3X89_06630 PF13167 GTP-binding GTPase N-terminal F3X89_06630 PF16360 GTP-binding GTPase Middle Region F3X89_06630 PF01926 50S ribosome-binding GTPase F3X89_06635 PF03819 MazG nucleotide pyrophosphohydrolase domain F3X89_06645 PF14824 Sirohaem biosynthesis protein central F3X89_06645 PF10414 Sirohaem synthase dimerisation region F3X89_06645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_06655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3X89_06655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3X89_06665 PF00175 Oxidoreductase NAD-binding domain F3X89_06665 PF00970 Oxidoreductase FAD-binding domain F3X89_06700 PF02683 Cytochrome C biogenesis protein transmembrane region F3X89_06705 PF03547 Membrane transport protein F3X89_06710 PF01494 FAD binding domain F3X89_06720 PF00107 Zinc-binding dehydrogenase F3X89_06720 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_06725 PF00005 ABC transporter F3X89_06730 PF02653 Branched-chain amino acid transport system / permease component F3X89_06735 PF02653 Branched-chain amino acid transport system / permease component F3X89_06740 PF02608 ABC transporter substrate-binding protein PnrA-like F3X89_06745 PF13407 Periplasmic binding protein domain F3X89_06750 PF00005 ABC transporter F3X89_06755 PF02653 Branched-chain amino acid transport system / permease component F3X89_06760 PF02653 Branched-chain amino acid transport system / permease component F3X89_06765 PF07729 FCD domain F3X89_06765 PF00392 Bacterial regulatory proteins, gntR family F3X89_06770 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_06770 PF14602 Hexapeptide repeat of succinyl-transferase F3X89_06770 PF12804 MobA-like NTP transferase domain F3X89_06775 PF01380 SIS domain F3X89_06795 PF17191 RecG wedge domain F3X89_06795 PF00271 Helicase conserved C-terminal domain F3X89_06795 PF00270 DEAD/DEAH box helicase F3X89_06805 PF00271 Helicase conserved C-terminal domain F3X89_06805 PF00270 DEAD/DEAH box helicase F3X89_06805 PF17757 UvrB interaction domain F3X89_06805 PF02559 CarD-like/TRCF domain F3X89_06805 PF03461 TRCF domain F3X89_06820 PF03466 LysR substrate binding domain F3X89_06820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_06830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_06845 PF03951 Glutamine synthetase, beta-Grasp domain F3X89_06845 PF00120 Glutamine synthetase, catalytic domain F3X89_06850 PF00543 Nitrogen regulatory protein P-II F3X89_06855 PF01256 Carbohydrate kinase F3X89_06855 PF03853 YjeF-related protein N-terminus F3X89_06865 PF17755 UvrA DNA-binding domain F3X89_06865 PF17760 UvrA interaction domain F3X89_06870 PF00436 Single-strand binding protein family F3X89_06875 PF01914 MarC family integral membrane protein F3X89_06880 PF03989 DNA gyrase C-terminal domain, beta-propeller F3X89_06880 PF00521 DNA gyrase/topoisomerase IV, subunit A F3X89_06890 PF00440 Bacterial regulatory proteins, tetR family F3X89_06900 PF01467 Cytidylyltransferase-like F3X89_06905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3X89_06910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3X89_06915 PF02547 Queuosine biosynthesis protein F3X89_06920 PF01702 Queuine tRNA-ribosyltransferase F3X89_06925 PF08241 Methyltransferase domain F3X89_06935 PF01471 Putative peptidoglycan binding domain F3X89_06935 PF07486 Cell Wall Hydrolase F3X89_06945 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_06945 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_06950 PF01638 HxlR-like helix-turn-helix F3X89_06960 PF00005 ABC transporter F3X89_06960 PF00664 ABC transporter transmembrane region F3X89_06965 PF00005 ABC transporter F3X89_06965 PF00664 ABC transporter transmembrane region F3X89_06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_06970 PF03466 LysR substrate binding domain F3X89_06995 PF12706 Beta-lactamase superfamily domain F3X89_06995 PF03099 Biotin/lipoate A/B protein ligase family F3X89_07000 PF01026 TatD related DNase F3X89_07005 PF09334 tRNA synthetases class I (M) F3X89_07005 PF08264 Anticodon-binding domain of tRNA F3X89_07010 PF01925 Sulfite exporter TauE/SafE F3X89_07015 PF09115 DNA polymerase III, delta subunit, C terminal F3X89_07020 PF02223 Thymidylate kinase F3X89_07030 PF03330 Lytic transglycolase F3X89_07030 PF05036 Sporulation related domain F3X89_07055 PF02245 Methylpurine-DNA glycosylase (MPG) F3X89_07060 PF07690 Major Facilitator Superfamily F3X89_07065 PF13533 Biotin-lipoyl like F3X89_07085 PF02885 Glycosyl transferase family, helical bundle domain F3X89_07085 PF00591 Glycosyl transferase family, a/b domain F3X89_07090 PF00218 Indole-3-glycerol phosphate synthase F3X89_07095 PF01967 MoaC family F3X89_07100 PF03453 MoeA N-terminal region (domain I and II) F3X89_07100 PF00994 Probable molybdopterin binding domain F3X89_07100 PF03454 MoeA C-terminal region (domain IV) F3X89_07105 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F3X89_07105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_07115 PF00285 Citrate synthase, C-terminal domain F3X89_07120 PF00285 Citrate synthase, C-terminal domain F3X89_07125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_07125 PF03466 LysR substrate binding domain F3X89_07145 PF03824 High-affinity nickel-transport protein F3X89_07155 PF01965 DJ-1/PfpI family F3X89_07160 PF06418 CTP synthase N-terminus F3X89_07160 PF00117 Glutamine amidotransferase class-I F3X89_07165 PF03840 Preprotein translocase SecG subunit F3X89_07170 PF00121 Triosephosphate isomerase F3X89_07180 PF00204 DNA gyrase B F3X89_07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_07180 PF00986 DNA gyrase B subunit, carboxyl terminus F3X89_07180 PF01751 Toprim domain F3X89_07190 PF01594 AI-2E family transporter F3X89_07195 PF00583 Acetyltransferase (GNAT) family F3X89_07225 PF02824 TGS domain F3X89_07225 PF03129 Anticodon binding domain F3X89_07225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3X89_07225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3X89_07235 PF01809 Putative membrane protein insertion efficiency factor F3X89_07245 PF01227 GTP cyclohydrolase I F3X89_07250 PF01502 Phosphoribosyl-AMP cyclohydrolase F3X89_07255 PF01734 Patatin-like phospholipase F3X89_07280 PF00561 alpha/beta hydrolase fold F3X89_07295 PF00768 D-alanyl-D-alanine carboxypeptidase F3X89_07295 PF07943 Penicillin-binding protein 5, C-terminal domain F3X89_07315 PF03313 Serine dehydratase alpha chain F3X89_07315 PF03315 Serine dehydratase beta chain F3X89_07335 PF00376 MerR family regulatory protein F3X89_07335 PF09278 MerR, DNA binding F3X89_07340 PF03448 MgtE intracellular N domain F3X89_07340 PF01769 Divalent cation transporter F3X89_07340 PF00571 CBS domain F3X89_07345 PF01327 Polypeptide deformylase F3X89_07360 PF03099 Biotin/lipoate A/B protein ligase family F3X89_07375 PF00289 Biotin carboxylase, N-terminal domain F3X89_07375 PF02785 Biotin carboxylase C-terminal domain F3X89_07375 PF00364 Biotin-requiring enzyme F3X89_07375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_07375 PF18140 Propionyl-coenzyme A carboxylase BT domain F3X89_07380 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_07380 PF00107 Zinc-binding dehydrogenase F3X89_07385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F3X89_07390 PF00756 Putative esterase F3X89_07395 PF00893 Small Multidrug Resistance protein F3X89_07400 PF07681 DoxX F3X89_07405 PF01039 Carboxyl transferase domain F3X89_07420 PF13419 Haloacid dehalogenase-like hydrolase F3X89_07425 PF00849 RNA pseudouridylate synthase F3X89_07425 PF01479 S4 domain F3X89_07435 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_07435 PF01571 Aminomethyltransferase folate-binding domain F3X89_07440 PF01597 Glycine cleavage H-protein F3X89_07445 PF02347 Glycine cleavage system P-protein F3X89_07455 PF01381 Helix-turn-helix F3X89_07470 PF01521 Iron-sulphur cluster biosynthesis F3X89_07475 PF01883 Iron-sulfur cluster assembly protein F3X89_07480 PF00266 Aminotransferase class-V F3X89_07485 PF01458 Uncharacterized protein family (UPF0051) F3X89_07490 PF00005 ABC transporter F3X89_07500 PF01458 Uncharacterized protein family (UPF0051) F3X89_07505 PF00266 Aminotransferase class-V F3X89_07510 PF02129 X-Pro dipeptidyl-peptidase (S15 family) F3X89_07525 PF00579 tRNA synthetases class I (W and Y) F3X89_07540 PF00578 AhpC/TSA family F3X89_07545 PF04305 Protein of unknown function (DUF455) F3X89_07550 PF01464 Transglycosylase SLT domain F3X89_07550 PF01551 Peptidase family M23 F3X89_07550 PF10145 Phage-related minor tail protein F3X89_07555 PF00271 Helicase conserved C-terminal domain F3X89_07555 PF00270 DEAD/DEAH box helicase F3X89_07560 PF00293 NUDIX domain F3X89_07570 PF12804 MobA-like NTP transferase domain F3X89_07570 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_07575 PF13478 XdhC Rossmann domain F3X89_07575 PF02625 XdhC and CoxI family F3X89_07590 PF05362 Lon protease (S16) C-terminal proteolytic domain F3X89_07590 PF02190 ATP-dependent protease La (LON) substrate-binding domain F3X89_07590 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_07595 PF01613 Flavin reductase like domain F3X89_07605 PF00834 Ribulose-phosphate 3 epimerase family F3X89_07615 PF00206 Lyase F3X89_07615 PF10397 Adenylosuccinate lyase C-terminus F3X89_07635 PF01259 SAICAR synthetase F3X89_07640 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase F3X89_07655 PF03668 P-loop ATPase protein family F3X89_07665 PF00392 Bacterial regulatory proteins, gntR family F3X89_07665 PF00155 Aminotransferase class I and II F3X89_07675 PF02769 AIR synthase related protein, C-terminal domain F3X89_07675 PF00586 AIR synthase related protein, N-terminal domain F3X89_07675 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F3X89_07695 PF00462 Glutaredoxin F3X89_07700 PF07690 Major Facilitator Superfamily F3X89_07705 PF07690 Major Facilitator Superfamily F3X89_07710 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_07715 PF00459 Inositol monophosphatase family F3X89_07720 PF00459 Inositol monophosphatase family F3X89_07725 PF01171 PP-loop family F3X89_07730 PF04960 Glutaminase F3X89_07735 PF01479 S4 domain F3X89_07735 PF00163 Ribosomal protein S4/S9 N-terminal domain F3X89_07745 PF01070 FMN-dependent dehydrogenase F3X89_07755 PF01177 Asp/Glu/Hydantoin racemase F3X89_07760 PF00588 SpoU rRNA Methylase family F3X89_07770 PF00180 Isocitrate/isopropylmalate dehydrogenase F3X89_07780 PF06445 GyrI-like small molecule binding domain F3X89_07785 PF01411 tRNA synthetases class II (A) F3X89_07785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3X89_07785 PF02272 DHHA1 domain F3X89_07790 PF00154 recA bacterial DNA recombination protein F3X89_07800 PF04227 Indigoidine synthase A like protein F3X89_07810 PF00512 His Kinase A (phospho-acceptor) domain F3X89_07810 PF00072 Response regulator receiver domain F3X89_07810 PF13188 PAS domain F3X89_07810 PF08448 PAS fold F3X89_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_07825 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3X89_07835 PF04317 YcjX-like family, DUF463 F3X89_07840 PF05128 Domain of unknown function (DUF697) F3X89_07850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F3X89_07860 PF00809 Pterin binding enzyme F3X89_07870 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_07890 PF00561 alpha/beta hydrolase fold F3X89_07900 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain F3X89_07900 PF04616 Glycosyl hydrolases family 43 F3X89_07905 PF00248 Aldo/keto reductase family F3X89_07910 PF10518 TAT (twin-arginine translocation) pathway signal sequence F3X89_07910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_07925 PF00005 ABC transporter F3X89_07925 PF17912 MalK OB fold domain F3X89_07930 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_07935 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_07940 PF01547 Bacterial extracellular solute-binding protein F3X89_07950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F3X89_07950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_07960 PF00583 Acetyltransferase (GNAT) family F3X89_07975 PF00005 ABC transporter F3X89_07980 PF02405 Permease MlaE F3X89_07985 PF12832 MFS_1 like family F3X89_08000 PF03949 Malic enzyme, NAD binding domain F3X89_08000 PF00390 Malic enzyme, N-terminal domain F3X89_08000 PF01515 Phosphate acetyl/butaryl transferase F3X89_08015 PF07676 WD40-like Beta Propeller Repeat F3X89_08020 PF02540 NAD synthase F3X89_08020 PF00795 Carbon-nitrogen hydrolase F3X89_08025 PF00884 Sulfatase F3X89_08050 PF01474 Class-II DAHP synthetase family F3X89_08055 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_08055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3X89_08065 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F3X89_08070 PF13419 Haloacid dehalogenase-like hydrolase F3X89_08075 PF03734 L,D-transpeptidase catalytic domain F3X89_08080 PF00206 Lyase F3X89_08080 PF10415 Fumarase C C-terminus F3X89_08085 PF05681 Fumarate hydratase (Fumerase) F3X89_08085 PF05683 Fumarase C-terminus F3X89_08090 PF17158 Membrane-associated sensor, integral membrane domain F3X89_08090 PF00990 Diguanylate cyclase, GGDEF domain F3X89_08105 PF01047 MarR family F3X89_08110 PF06772 Bacterial low temperature requirement A protein (LtrA) F3X89_08120 PF04055 Radical SAM superfamily F3X89_08120 PF06463 Molybdenum Cofactor Synthesis C F3X89_08125 PF08241 Methyltransferase domain F3X89_08130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_08130 PF00672 HAMP domain F3X89_08135 PF00892 EamA-like transporter family F3X89_08140 PF12804 MobA-like NTP transferase domain F3X89_08145 PF03205 Molybdopterin guanine dinucleotide synthesis protein B F3X89_08155 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_08160 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_08165 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_08170 PF06233 Usg-like family F3X89_08175 PF08241 Methyltransferase domain F3X89_08185 PF01022 Bacterial regulatory protein, arsR family F3X89_08195 PF00005 ABC transporter F3X89_08200 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_08205 PF00296 Luciferase-like monooxygenase F3X89_08210 PF09084 NMT1/THI5 like F3X89_08215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_08215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3X89_08220 PF01037 Lrp/AsnC ligand binding domain F3X89_08220 PF13404 AsnC-type helix-turn-helix domain F3X89_08225 PF03167 Uracil DNA glycosylase superfamily F3X89_08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_08235 PF00512 His Kinase A (phospho-acceptor) domain F3X89_08235 PF00989 PAS fold F3X89_08240 PF01219 Prokaryotic diacylglycerol kinase F3X89_08245 PF02277 Phosphoribosyltransferase F3X89_08250 PF02654 Cobalamin-5-phosphate synthase F3X89_08265 PF00892 EamA-like transporter family F3X89_08275 PF08245 Mur ligase middle domain F3X89_08275 PF02875 Mur ligase family, glutamate ligase domain F3X89_08280 PF01061 ABC-2 type transporter F3X89_08285 PF00005 ABC transporter F3X89_08300 PF03061 Thioesterase superfamily F3X89_08330 PF00083 Sugar (and other) transporter F3X89_08335 PF17757 UvrB interaction domain F3X89_08335 PF02151 UvrB/uvrC motif F3X89_08335 PF04851 Type III restriction enzyme, res subunit F3X89_08335 PF00271 Helicase conserved C-terminal domain F3X89_08335 PF12344 Ultra-violet resistance protein B F3X89_08345 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_08345 PF00672 HAMP domain F3X89_08350 PF00313 'Cold-shock' DNA-binding domain F3X89_08355 PF01207 Dihydrouridine synthase (Dus) F3X89_08360 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3X89_08365 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_08375 PF00950 ABC 3 transport family F3X89_08380 PF00005 ABC transporter F3X89_08385 PF01297 Zinc-uptake complex component A periplasmic F3X89_08390 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3X89_08390 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3X89_08410 PF00107 Zinc-binding dehydrogenase F3X89_08410 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_08415 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_08415 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_08425 PF07977 FabA-like domain F3X89_08430 PF00550 Phosphopantetheine attachment site F3X89_08440 PF03186 CobD/Cbib protein F3X89_08445 PF00155 Aminotransferase class I and II F3X89_08450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3X89_08450 PF07685 CobB/CobQ-like glutamine amidotransferase domain F3X89_08455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_08460 PF01156 Inosine-uridine preferring nucleoside hydrolase F3X89_08465 PF01890 Cobalamin synthesis G C-terminus F3X89_08470 PF01925 Sulfite exporter TauE/SafE F3X89_08485 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F3X89_08490 PF16867 Dimethlysulfonioproprionate lyase F3X89_08495 PF02514 CobN/Magnesium Chelatase F3X89_08500 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3X89_08500 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3X89_08505 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F3X89_08510 PF00654 Voltage gated chloride channel F3X89_08515 PF07685 CobB/CobQ-like glutamine amidotransferase domain F3X89_08525 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_08530 PF00571 CBS domain F3X89_08530 PF00005 ABC transporter F3X89_08535 PF02574 Homocysteine S-methyltransferase F3X89_08535 PF02310 B12 binding domain F3X89_08535 PF02607 B12 binding domain F3X89_08535 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3X89_08535 PF00809 Pterin binding enzyme F3X89_08545 PF00535 Glycosyl transferase family 2 F3X89_08560 PF06253 Trimethylamine methyltransferase (MTTB) F3X89_08565 PF02607 B12 binding domain F3X89_08565 PF02310 B12 binding domain F3X89_08595 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3X89_08595 PF02607 B12 binding domain F3X89_08595 PF02310 B12 binding domain F3X89_08595 PF02574 Homocysteine S-methyltransferase F3X89_08595 PF00809 Pterin binding enzyme F3X89_08615 PF03466 LysR substrate binding domain F3X89_08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_08630 PF12833 Helix-turn-helix domain F3X89_08630 PF01965 DJ-1/PfpI family F3X89_08635 PF00990 Diguanylate cyclase, GGDEF domain F3X89_08635 PF00072 Response regulator receiver domain F3X89_08640 PF00072 Response regulator receiver domain F3X89_08645 PF12794 Mechanosensitive ion channel inner membrane domain 1 F3X89_08645 PF00924 Mechanosensitive ion channel F3X89_08645 PF12795 Mechanosensitive ion channel porin domain F3X89_08670 PF02082 Transcriptional regulator F3X89_08685 PF02567 Phenazine biosynthesis-like protein F3X89_08700 PF08402 TOBE domain F3X89_08700 PF00005 ABC transporter F3X89_08705 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_08715 PF00248 Aldo/keto reductase family F3X89_08720 PF00155 Aminotransferase class I and II F3X89_08745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F3X89_08745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F3X89_08755 PF06719 AraC-type transcriptional regulator N-terminus F3X89_08755 PF12833 Helix-turn-helix domain F3X89_08760 PF00107 Zinc-binding dehydrogenase F3X89_08760 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_08765 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_08775 PF01037 Lrp/AsnC ligand binding domain F3X89_08780 PF01177 Asp/Glu/Hydantoin racemase F3X89_08790 PF00583 Acetyltransferase (GNAT) family F3X89_08800 PF07690 Major Facilitator Superfamily F3X89_08805 PF01494 FAD binding domain F3X89_08810 PF01638 HxlR-like helix-turn-helix F3X89_08820 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F3X89_08825 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain F3X89_08825 PF13538 UvrD-like helicase C-terminal domain F3X89_08825 PF14490 Helix-hairpin-helix containing domain F3X89_08835 PF02211 Nitrile hydratase beta subunit F3X89_08840 PF02979 Nitrile hydratase, alpha chain F3X89_08855 PF01810 LysE type translocator F3X89_08860 PF00248 Aldo/keto reductase family F3X89_08865 PF05159 Capsule polysaccharide biosynthesis protein F3X89_08870 PF10369 Small subunit of acetolactate synthase F3X89_08875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3X89_08875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3X89_08875 PF00205 Thiamine pyrophosphate enzyme, central domain F3X89_08895 PF13302 Acetyltransferase (GNAT) domain F3X89_08900 PF17820 PDZ domain F3X89_08900 PF13180 PDZ domain F3X89_08910 PF12221 Bacterial membrane protein N terminal F3X89_08910 PF01145 SPFH domain / Band 7 family F3X89_08915 PF00186 Dihydrofolate reductase F3X89_08925 PF00535 Glycosyl transferase family 2 F3X89_08930 PF04303 PrpF protein F3X89_08935 PF03737 Aldolase/RraA F3X89_08940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_08945 PF02585 GlcNAc-PI de-N-acetylase F3X89_08955 PF11862 Domain of unknown function (DUF3382) F3X89_08955 PF02653 Branched-chain amino acid transport system / permease component F3X89_08960 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_08960 PF00005 ABC transporter F3X89_08965 PF00005 ABC transporter F3X89_08970 PF13458 Periplasmic binding protein F3X89_08980 PF03466 LysR substrate binding domain F3X89_08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_08985 PF01381 Helix-turn-helix F3X89_08995 PF04657 Putative inner membrane exporter, YdcZ F3X89_09000 PF01738 Dienelactone hydrolase family F3X89_09005 PF00303 Thymidylate synthase F3X89_09035 PF02913 FAD linked oxidases, C-terminal domain F3X89_09035 PF01565 FAD binding domain F3X89_09040 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_09045 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_09050 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_09055 PF00005 ABC transporter F3X89_09070 PF00691 OmpA family F3X89_09070 PF13488 Glycine zipper F3X89_09075 PF00669 Bacterial flagellin N-terminal helical region F3X89_09075 PF00700 Bacterial flagellin C-terminal helical region F3X89_09080 PF00873 AcrB/AcrD/AcrF family F3X89_09085 PF13533 Biotin-lipoyl like F3X89_09090 PF13361 UvrD-like helicase C-terminal domain F3X89_09090 PF00580 UvrD/REP helicase N-terminal domain F3X89_09100 PF07690 Major Facilitator Superfamily F3X89_09105 PF00857 Isochorismatase family F3X89_09110 PF00534 Glycosyl transferases group 1 F3X89_09110 PF13439 Glycosyltransferase Family 4 F3X89_09120 PF02569 Pantoate-beta-alanine ligase F3X89_09125 PF02548 Ketopantoate hydroxymethyltransferase F3X89_09145 PF01321 Creatinase/Prolidase N-terminal domain F3X89_09145 PF00557 Metallopeptidase family M24 F3X89_09155 PF01494 FAD binding domain F3X89_09160 PF02630 SCO1/SenC F3X89_09165 PF01584 CheW-like domain F3X89_09180 PF00583 Acetyltransferase (GNAT) family F3X89_09185 PF00533 BRCA1 C Terminus (BRCT) domain F3X89_09185 PF12826 Helix-hairpin-helix motif F3X89_09185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F3X89_09185 PF03120 NAD-dependent DNA ligase OB-fold domain F3X89_09185 PF01653 NAD-dependent DNA ligase adenylation domain F3X89_09190 PF02463 RecF/RecN/SMC N terminal domain F3X89_09195 PF13525 Outer membrane lipoprotein F3X89_09200 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F3X89_09205 PF12327 FtsZ family, C-terminal domain F3X89_09205 PF00091 Tubulin/FtsZ family, GTPase domain F3X89_09210 PF02491 SHS2 domain inserted in FTSA F3X89_09215 PF08478 POTRA domain, FtsQ-type F3X89_09215 PF03799 Cell division protein FtsQ F3X89_09220 PF01820 D-ala D-ala ligase N-terminus F3X89_09220 PF07478 D-ala D-ala ligase C-terminus F3X89_09225 PF00230 Major intrinsic protein F3X89_09230 PF00083 Sugar (and other) transporter F3X89_09230 PF07690 Major Facilitator Superfamily F3X89_09235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F3X89_09235 PF01565 FAD binding domain F3X89_09240 PF02875 Mur ligase family, glutamate ligase domain F3X89_09240 PF08245 Mur ligase middle domain F3X89_09240 PF01225 Mur ligase family, catalytic domain F3X89_09245 PF03033 Glycosyltransferase family 28 N-terminal domain F3X89_09245 PF04101 Glycosyltransferase family 28 C-terminal domain F3X89_09250 PF01098 Cell cycle protein F3X89_09255 PF08245 Mur ligase middle domain F3X89_09260 PF00953 Glycosyl transferase family 4 F3X89_09260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F3X89_09265 PF01225 Mur ligase family, catalytic domain F3X89_09265 PF02875 Mur ligase family, glutamate ligase domain F3X89_09265 PF08245 Mur ligase middle domain F3X89_09270 PF02875 Mur ligase family, glutamate ligase domain F3X89_09270 PF08245 Mur ligase middle domain F3X89_09270 PF01225 Mur ligase family, catalytic domain F3X89_09275 PF03717 Penicillin-binding Protein dimerisation domain F3X89_09275 PF00905 Penicillin binding protein transpeptidase domain F3X89_09285 PF01795 MraW methylase family F3X89_09290 PF02381 MraZ protein, putative antitoxin-like F3X89_09310 PF01510 N-acetylmuramoyl-L-alanine amidase F3X89_09315 PF05099 Tellurite resistance protein TerB F3X89_09315 PF00226 DnaJ domain F3X89_09320 PF00365 Phosphofructokinase F3X89_09325 PF01810 LysE type translocator F3X89_09345 PF13649 Methyltransferase domain F3X89_09350 PF01183 Glycosyl hydrolases family 25 F3X89_09360 PF00892 EamA-like transporter family F3X89_09365 PF02219 Methylenetetrahydrofolate reductase F3X89_09370 PF01209 ubiE/COQ5 methyltransferase family F3X89_09375 PF00005 ABC transporter F3X89_09375 PF12848 ABC transporter F3X89_09385 PF00561 alpha/beta hydrolase fold F3X89_09395 PF02515 CoA-transferase family III F3X89_09400 PF00205 Thiamine pyrophosphate enzyme, central domain F3X89_09400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3X89_09400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3X89_09405 PF01042 Endoribonuclease L-PSP F3X89_09420 PF03734 L,D-transpeptidase catalytic domain F3X89_09420 PF01476 LysM domain F3X89_09425 PF00465 Iron-containing alcohol dehydrogenase F3X89_09430 PF00171 Aldehyde dehydrogenase family F3X89_09435 PF03951 Glutamine synthetase, beta-Grasp domain F3X89_09435 PF00120 Glutamine synthetase, catalytic domain F3X89_09460 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_09465 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_09470 PF00005 ABC transporter F3X89_09470 PF08402 TOBE domain F3X89_09475 PF00885 6,7-dimethyl-8-ribityllumazine synthase F3X89_09485 PF00392 Bacterial regulatory proteins, gntR family F3X89_09495 PF01040 UbiA prenyltransferase family F3X89_09500 PF08402 TOBE domain F3X89_09500 PF00005 ABC transporter F3X89_09505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_09505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_09510 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_09515 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_09520 PF01547 Bacterial extracellular solute-binding protein F3X89_09525 PF01869 BadF/BadG/BcrA/BcrD ATPase family F3X89_09530 PF00392 Bacterial regulatory proteins, gntR family F3X89_09530 PF07702 UTRA domain F3X89_09535 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3X89_09535 PF02574 Homocysteine S-methyltransferase F3X89_09535 PF00809 Pterin binding enzyme F3X89_09535 PF02310 B12 binding domain F3X89_09535 PF02607 B12 binding domain F3X89_09545 PF03928 Haem-degrading F3X89_09585 PF03060 Nitronate monooxygenase F3X89_09670 PF04402 Protein of unknown function (DUF541) F3X89_09685 PF01894 Uncharacterised protein family UPF0047 F3X89_09690 PF07237 Protein of unknown function (DUF1428) F3X89_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_09700 PF03466 LysR substrate binding domain F3X89_09710 PF03484 tRNA synthetase B5 domain F3X89_09710 PF03483 B3/4 domain F3X89_09710 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F3X89_09710 PF01588 Putative tRNA binding domain F3X89_09710 PF03147 Ferredoxin-fold anticodon binding domain F3X89_09715 PF02311 AraC-like ligand binding domain F3X89_09715 PF12833 Helix-turn-helix domain F3X89_09720 PF00892 EamA-like transporter family F3X89_09730 PF01636 Phosphotransferase enzyme family F3X89_09735 PF04539 Sigma-70 region 3 F3X89_09735 PF04542 Sigma-70 region 2 F3X89_09735 PF00140 Sigma-70 factor, region 1.2 F3X89_09735 PF03979 Sigma-70 factor, region 1.1 F3X89_09735 PF04546 Sigma-70, non-essential region F3X89_09735 PF04545 Sigma-70, region 4 F3X89_09740 PF00107 Zinc-binding dehydrogenase F3X89_09740 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_09745 PF00155 Aminotransferase class I and II F3X89_09755 PF00270 DEAD/DEAH box helicase F3X89_09755 PF00271 Helicase conserved C-terminal domain F3X89_09755 PF09382 RQC domain F3X89_09755 PF16124 RecQ zinc-binding F3X89_09755 PF00570 HRDC domain F3X89_09760 PF10410 DnaB-helicase binding domain of primase F3X89_09760 PF08278 DNA primase DnaG DnaB-binding F3X89_09760 PF08275 DNA primase catalytic core, N-terminal domain F3X89_09760 PF01807 CHC2 zinc finger F3X89_09775 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F3X89_09775 PF00117 Glutamine amidotransferase class-I F3X89_09780 PF01878 EVE domain F3X89_09785 PF01554 MatE F3X89_09790 PF07690 Major Facilitator Superfamily F3X89_09795 PF04228 Putative neutral zinc metallopeptidase F3X89_09810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_09810 PF02142 MGS-like domain F3X89_09810 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F3X89_09815 PF03449 Transcription elongation factor, N-terminal F3X89_09815 PF01272 Transcription elongation factor, GreA/GreB, C-term F3X89_09820 PF00534 Glycosyl transferases group 1 F3X89_09835 PF01037 Lrp/AsnC ligand binding domain F3X89_09840 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_09845 PF03466 LysR substrate binding domain F3X89_09845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_09850 PF01022 Bacterial regulatory protein, arsR family F3X89_09855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3X89_09860 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase F3X89_09870 PF03466 LysR substrate binding domain F3X89_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_09880 PF01699 Sodium/calcium exchanger protein F3X89_09885 PF00155 Aminotransferase class I and II F3X89_09890 PF07995 Glucose / Sorbosone dehydrogenase F3X89_09900 PF00313 'Cold-shock' DNA-binding domain F3X89_09910 PF00753 Metallo-beta-lactamase superfamily F3X89_09925 PF12802 MarR family F3X89_09930 PF00486 Transcriptional regulatory protein, C terminal F3X89_09930 PF00072 Response regulator receiver domain F3X89_09935 PF00672 HAMP domain F3X89_09935 PF00512 His Kinase A (phospho-acceptor) domain F3X89_09935 PF16527 Two-component sensor protein CpxA, periplasmic domain F3X89_09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_09945 PF01588 Putative tRNA binding domain F3X89_09950 PF03807 NADP oxidoreductase coenzyme F420-dependent F3X89_09950 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3X89_09965 PF01790 Prolipoprotein diacylglyceryl transferase F3X89_09975 PF02578 Multi-copper polyphenol oxidoreductase laccase F3X89_09990 PF14572 Phosphoribosyl synthetase-associated domain F3X89_09990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F3X89_10010 PF14693 Ribosomal protein TL5, C-terminal domain F3X89_10010 PF01386 Ribosomal L25p family F3X89_10015 PF00563 EAL domain F3X89_10015 PF00990 Diguanylate cyclase, GGDEF domain F3X89_10015 PF03707 Bacterial signalling protein N terminal repeat F3X89_10025 PF01195 Peptidyl-tRNA hydrolase F3X89_10035 PF02617 ATP-dependent Clp protease adaptor protein ClpS F3X89_10040 PF01926 50S ribosome-binding GTPase F3X89_10040 PF06071 Protein of unknown function (DUF933) F3X89_10055 PF00156 Phosphoribosyl transferase domain F3X89_10060 PF02167 Cytochrome C1 family F3X89_10060 PF00033 Cytochrome b/b6/petB F3X89_10060 PF00032 Cytochrome b(C-terminal)/b6/petD F3X89_10065 PF00032 Cytochrome b(C-terminal)/b6/petD F3X89_10065 PF00033 Cytochrome b/b6/petB F3X89_10070 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F3X89_10070 PF00355 Rieske [2Fe-2S] domain F3X89_10080 PF00005 ABC transporter F3X89_10080 PF00664 ABC transporter transmembrane region F3X89_10085 PF00005 ABC transporter F3X89_10085 PF00664 ABC transporter transmembrane region F3X89_10090 PF00588 SpoU rRNA Methylase family F3X89_10100 PF02690 Na+/Pi-cotransporter F3X89_10110 PF01218 Coproporphyrinogen III oxidase F3X89_10125 PF01743 Poly A polymerase head domain F3X89_10125 PF12627 Probable RNA and SrmB- binding site of polymerase A F3X89_10125 PF13735 tRNA nucleotidyltransferase domain 2 putative F3X89_10130 PF00293 NUDIX domain F3X89_10140 PF07726 ATPase family associated with various cellular activities (AAA) F3X89_10140 PF17863 AAA lid domain F3X89_10160 PF00583 Acetyltransferase (GNAT) family F3X89_10175 PF13409 Glutathione S-transferase, N-terminal domain F3X89_10180 PF00293 NUDIX domain F3X89_10180 PF13344 Haloacid dehalogenase-like hydrolase F3X89_10195 PF04542 Sigma-70 region 2 F3X89_10195 PF04545 Sigma-70, region 4 F3X89_10215 PF00005 ABC transporter F3X89_10215 PF00664 ABC transporter transmembrane region F3X89_10220 PF00682 HMGL-like F3X89_10220 PF08502 LeuA allosteric (dimerisation) domain F3X89_10225 PF03594 Benzoate membrane transport protein F3X89_10230 PF01272 Transcription elongation factor, GreA/GreB, C-term F3X89_10230 PF03449 Transcription elongation factor, N-terminal F3X89_10240 PF00574 Clp protease F3X89_10250 PF14489 QueF-like protein F3X89_10255 PF16916 Dimerisation domain of Zinc Transporter F3X89_10255 PF01545 Cation efflux family F3X89_10260 PF00881 Nitroreductase family F3X89_10270 PF04715 Anthranilate synthase component I, N terminal region F3X89_10270 PF00117 Glutamine amidotransferase class-I F3X89_10270 PF00425 chorismate binding enzyme F3X89_10275 PF00005 ABC transporter F3X89_10275 PF16326 ABC transporter C-terminal domain F3X89_10275 PF12848 ABC transporter F3X89_10280 PF00593 TonB dependent receptor F3X89_10280 PF07715 TonB-dependent Receptor Plug Domain F3X89_10290 PF01268 Formate--tetrahydrofolate ligase F3X89_10295 PF03350 Uncharacterized protein family, UPF0114 F3X89_10310 PF00196 Bacterial regulatory proteins, luxR family F3X89_10310 PF03472 Autoinducer binding domain F3X89_10335 PF00265 Thymidine kinase F3X89_10340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3X89_10345 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_10350 PF00571 CBS domain F3X89_10350 PF00005 ABC transporter F3X89_10360 PF01022 Bacterial regulatory protein, arsR family F3X89_10365 PF00202 Aminotransferase class-III F3X89_10370 PF13382 Adenine deaminase C-terminal domain F3X89_10370 PF01979 Amidohydrolase family F3X89_10375 PF00128 Alpha amylase, catalytic domain F3X89_10380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_10385 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_10390 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_10390 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_10395 PF00005 ABC transporter F3X89_10395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_10400 PF00005 ABC transporter F3X89_10400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_10405 PF00294 pfkB family carbohydrate kinase F3X89_10425 PF01047 MarR family F3X89_10430 PF01926 50S ribosome-binding GTPase F3X89_10430 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F3X89_10450 PF05992 SbmA/BacA-like family F3X89_10455 PF03551 Transcriptional regulator PadR-like family F3X89_10460 PF00557 Metallopeptidase family M24 F3X89_10480 PF08281 Sigma-70, region 4 F3X89_10480 PF04542 Sigma-70 region 2 F3X89_10485 PF03795 YCII-related domain F3X89_10495 PF17676 LD-carboxypeptidase C-terminal domain F3X89_10495 PF02016 LD-carboxypeptidase N-terminal domain F3X89_10505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_10505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_10515 PF01799 [2Fe-2S] binding domain F3X89_10515 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_10520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase F3X89_10520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain F3X89_10535 PF03466 LysR substrate binding domain F3X89_10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_10550 PF01979 Amidohydrolase family F3X89_10555 PF01070 FMN-dependent dehydrogenase F3X89_10565 PF00576 HIUase/Transthyretin family F3X89_10570 PF04115 Ureidoglycolate lyase F3X89_10580 PF01014 Uricase F3X89_10580 PF09349 OHCU decarboxylase F3X89_10590 PF06299 Protein of unknown function (DUF1045) F3X89_10595 PF01266 FAD dependent oxidoreductase F3X89_10600 PF01266 FAD dependent oxidoreductase F3X89_10600 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F3X89_10605 PF01627 Hpt domain F3X89_10605 PF00512 His Kinase A (phospho-acceptor) domain F3X89_10605 PF00072 Response regulator receiver domain F3X89_10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_10605 PF00672 HAMP domain F3X89_10605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F3X89_10610 PF06253 Trimethylamine methyltransferase (MTTB) F3X89_10620 PF00270 DEAD/DEAH box helicase F3X89_10620 PF00271 Helicase conserved C-terminal domain F3X89_10635 PF14403 Circularly permuted ATP-grasp type 2 F3X89_10640 PF14403 Circularly permuted ATP-grasp type 2 F3X89_10640 PF04168 A predicted alpha-helical domain with a conserved ER motif. F3X89_10655 PF00005 ABC transporter F3X89_10655 PF00664 ABC transporter transmembrane region F3X89_10660 PF00920 Dehydratase family F3X89_10665 PF00171 Aldehyde dehydrogenase family F3X89_10675 PF02653 Branched-chain amino acid transport system / permease component F3X89_10680 PF00005 ABC transporter F3X89_10685 PF13407 Periplasmic binding protein domain F3X89_10690 PF03466 LysR substrate binding domain F3X89_10690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_10705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_10705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_10715 PF13407 Periplasmic binding protein domain F3X89_10720 PF02653 Branched-chain amino acid transport system / permease component F3X89_10725 PF00005 ABC transporter F3X89_10755 PF00144 Beta-lactamase F3X89_10760 PF03466 LysR substrate binding domain F3X89_10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_10770 PF00156 Phosphoribosyl transferase domain F3X89_10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_10775 PF03466 LysR substrate binding domain F3X89_10780 PF07690 Major Facilitator Superfamily F3X89_10790 PF01569 PAP2 superfamily F3X89_10795 PF00072 Response regulator receiver domain F3X89_10795 PF00486 Transcriptional regulatory protein, C terminal F3X89_10800 PF08019 Phosphoethanolamine transferase EptA/EptB F3X89_10800 PF00884 Sulfatase F3X89_10825 PF00300 Histidine phosphatase superfamily (branch 1) F3X89_10840 PF00155 Aminotransferase class I and II F3X89_10840 PF00392 Bacterial regulatory proteins, gntR family F3X89_10855 PF00583 Acetyltransferase (GNAT) family F3X89_10870 PF02779 Transketolase, pyrimidine binding domain F3X89_10870 PF02780 Transketolase, C-terminal domain F3X89_10880 PF00654 Voltage gated chloride channel F3X89_10885 PF08241 Methyltransferase domain F3X89_10885 PF13649 Methyltransferase domain F3X89_10890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_10890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_10900 PF00893 Small Multidrug Resistance protein F3X89_10910 PF00005 ABC transporter F3X89_10910 PF03459 TOBE domain F3X89_10910 PF17912 MalK OB fold domain F3X89_10915 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_10920 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_10935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_10935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_10940 PF00356 Bacterial regulatory proteins, lacI family F3X89_10990 PF01497 Periplasmic binding protein F3X89_10995 PF01032 FecCD transport family F3X89_11000 PF00005 ABC transporter F3X89_11015 PF04542 Sigma-70 region 2 F3X89_11015 PF08281 Sigma-70, region 4 F3X89_11025 PF00072 Response regulator receiver domain F3X89_11030 PF13426 PAS domain F3X89_11030 PF07536 HWE histidine kinase F3X89_11030 PF08447 PAS fold F3X89_11035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3X89_11035 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_11040 PF01180 Dihydroorotate dehydrogenase F3X89_11045 PF00440 Bacterial regulatory proteins, tetR family F3X89_11045 PF08362 YcdC-like protein, C-terminal region F3X89_11050 PF01546 Peptidase family M20/M25/M40 F3X89_11050 PF07687 Peptidase dimerisation domain F3X89_11055 PF01979 Amidohydrolase family F3X89_11065 PF00005 ABC transporter F3X89_11075 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_11080 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_11090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_11095 PF00873 AcrB/AcrD/AcrF family F3X89_11100 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3X89_11105 PF01730 UreF F3X89_11110 PF05194 UreE urease accessory protein, C-terminal domain F3X89_11110 PF02814 UreE urease accessory protein, N-terminal domain F3X89_11115 PF08448 PAS fold F3X89_11115 PF00990 Diguanylate cyclase, GGDEF domain F3X89_11125 PF00449 Urease alpha-subunit, N-terminal domain F3X89_11125 PF01979 Amidohydrolase family F3X89_11135 PF00699 Urease beta subunit F3X89_11140 PF00547 Urease, gamma subunit F3X89_11145 PF01774 UreD urease accessory protein F3X89_11150 PF00005 ABC transporter F3X89_11155 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_11155 PF00005 ABC transporter F3X89_11165 PF02653 Branched-chain amino acid transport system / permease component F3X89_11175 PF00512 His Kinase A (phospho-acceptor) domain F3X89_11175 PF00072 Response regulator receiver domain F3X89_11175 PF01627 Hpt domain F3X89_11175 PF18415 Histidine kinase receptor ArcB trans-membrane domain F3X89_11175 PF00989 PAS fold F3X89_11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_11180 PF00072 Response regulator receiver domain F3X89_11180 PF00486 Transcriptional regulatory protein, C terminal F3X89_11185 PF13458 Periplasmic binding protein F3X89_11195 PF00005 ABC transporter F3X89_11200 PF00005 ABC transporter F3X89_11200 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_11205 PF11862 Domain of unknown function (DUF3382) F3X89_11205 PF02653 Branched-chain amino acid transport system / permease component F3X89_11210 PF02653 Branched-chain amino acid transport system / permease component F3X89_11215 PF01266 FAD dependent oxidoreductase F3X89_11215 PF01571 Aminomethyltransferase folate-binding domain F3X89_11215 PF16350 FAD dependent oxidoreductase central domain F3X89_11215 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_11220 PF01571 Aminomethyltransferase folate-binding domain F3X89_11220 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_11225 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_11225 PF17806 Sarcosine oxidase A3 domain F3X89_11225 PF01571 Aminomethyltransferase folate-binding domain F3X89_11230 PF04267 Sarcosine oxidase, delta subunit family F3X89_11235 PF01266 FAD dependent oxidoreductase F3X89_11240 PF00459 Inositol monophosphatase family F3X89_11260 PF00072 Response regulator receiver domain F3X89_11260 PF00486 Transcriptional regulatory protein, C terminal F3X89_11265 PF00196 Bacterial regulatory proteins, luxR family F3X89_11265 PF00072 Response regulator receiver domain F3X89_11270 PF10090 Histidine phosphotransferase C-terminal domain F3X89_11285 PF00588 SpoU rRNA Methylase family F3X89_11295 PF00849 RNA pseudouridylate synthase F3X89_11300 PF04542 Sigma-70 region 2 F3X89_11300 PF04545 Sigma-70, region 4 F3X89_11300 PF00140 Sigma-70 factor, region 1.2 F3X89_11310 PF00709 Adenylosuccinate synthetase F3X89_11320 PF07969 Amidohydrolase family F3X89_11325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3X89_11325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3X89_11325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3X89_11330 PF16363 GDP-mannose 4,6 dehydratase F3X89_11335 PF01613 Flavin reductase like domain F3X89_11340 PF02633 Creatinine amidohydrolase F3X89_11350 PF09084 NMT1/THI5 like F3X89_11355 PF00005 ABC transporter F3X89_11360 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_11365 PF07969 Amidohydrolase family F3X89_11375 PF02525 Flavodoxin-like fold F3X89_11390 PF08241 Methyltransferase domain F3X89_11395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_11400 PF01042 Endoribonuclease L-PSP F3X89_11425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_11430 PF03167 Uracil DNA glycosylase superfamily F3X89_11435 PF01494 FAD binding domain F3X89_11440 PF16350 FAD dependent oxidoreductase central domain F3X89_11440 PF01266 FAD dependent oxidoreductase F3X89_11440 PF01571 Aminomethyltransferase folate-binding domain F3X89_11440 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_11450 PF08220 DeoR-like helix-turn-helix domain F3X89_11450 PF00455 DeoR C terminal sensor domain F3X89_11455 PF03466 LysR substrate binding domain F3X89_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_11460 PF03601 Conserved hypothetical protein 698 F3X89_11465 PF13188 PAS domain F3X89_11465 PF00563 EAL domain F3X89_11465 PF00990 Diguanylate cyclase, GGDEF domain F3X89_11465 PF03707 Bacterial signalling protein N terminal repeat F3X89_11470 PF00920 Dehydratase family F3X89_11475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_11475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3X89_11480 PF01370 NAD dependent epimerase/dehydratase family F3X89_11485 PF00873 AcrB/AcrD/AcrF family F3X89_11490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_11500 PF03466 LysR substrate binding domain F3X89_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_11510 PF12680 SnoaL-like domain F3X89_11510 PF08281 Sigma-70, region 4 F3X89_11510 PF04542 Sigma-70 region 2 F3X89_11520 PF00892 EamA-like transporter family F3X89_11530 PF01047 MarR family F3X89_11535 PF01047 MarR family F3X89_11550 PF00672 HAMP domain F3X89_11550 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_11550 PF02743 Cache domain F3X89_11565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_11565 PF03466 LysR substrate binding domain F3X89_11570 PF00296 Luciferase-like monooxygenase F3X89_11585 PF13660 Domain of unknown function (DUF4147) F3X89_11585 PF05161 MOFRL family F3X89_11600 PF07690 Major Facilitator Superfamily F3X89_11610 PF00313 'Cold-shock' DNA-binding domain F3X89_11620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_11630 PF13378 Enolase C-terminal domain-like F3X89_11630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3X89_11635 PF02515 CoA-transferase family III F3X89_11640 PF02627 Carboxymuconolactone decarboxylase family F3X89_11655 PF03180 NLPA lipoprotein F3X89_11660 PF00005 ABC transporter F3X89_11660 PF09383 NIL domain F3X89_11665 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_11670 PF00296 Luciferase-like monooxygenase F3X89_11675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3X89_11680 PF00005 ABC transporter F3X89_11685 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_11690 PF01145 SPFH domain / Band 7 family F3X89_11695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_11695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_11695 PF11890 Domain of unknown function (DUF3410) F3X89_11705 PF07690 Major Facilitator Superfamily F3X89_11730 PF02530 Porin subfamily F3X89_11775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_11775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_11775 PF01842 ACT domain F3X89_11790 PF13505 Outer membrane protein beta-barrel domain F3X89_11815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3X89_11815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3X89_11815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3X89_11815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3X89_11820 PF17862 AAA+ lid domain F3X89_11820 PF06480 FtsH Extracellular F3X89_11820 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_11820 PF01434 Peptidase family M41 F3X89_11825 PF01171 PP-loop family F3X89_11835 PF00691 OmpA family F3X89_11840 PF04052 TolB amino-terminal domain F3X89_11840 PF07676 WD40-like Beta Propeller Repeat F3X89_11855 PF02472 Biopolymer transport protein ExbD/TolR F3X89_11860 PF01618 MotA/TolQ/ExbB proton channel family F3X89_11865 PF03061 Thioesterase superfamily F3X89_11880 PF16363 GDP-mannose 4,6 dehydratase F3X89_11885 PF02632 BioY family F3X89_11890 PF04055 Radical SAM superfamily F3X89_11890 PF06968 Biotin and Thiamin Synthesis associated domain F3X89_11895 PF05163 DinB family F3X89_11900 PF00293 NUDIX domain F3X89_11905 PF00149 Calcineurin-like phosphoesterase F3X89_11910 PF05491 RuvB C-terminal winged helix domain F3X89_11910 PF05496 Holliday junction DNA helicase RuvB P-loop domain F3X89_11910 PF17864 RuvB AAA lid domain F3X89_11915 PF01330 RuvA N terminal domain F3X89_11915 PF07499 RuvA, C-terminal domain F3X89_11930 PF02075 Crossover junction endodeoxyribonuclease RuvC F3X89_11935 PF00296 Luciferase-like monooxygenase F3X89_11940 PF01709 Transcriptional regulator F3X89_11950 PF13277 YmdB-like protein F3X89_11960 PF13419 Haloacid dehalogenase-like hydrolase F3X89_11970 PF09924 Uncharacterised conserved protein (DUF2156) F3X89_11970 PF03706 Lysylphosphatidylglycerol synthase TM region F3X89_11985 PF16363 GDP-mannose 4,6 dehydratase F3X89_12030 PF00456 Transketolase, thiamine diphosphate binding domain F3X89_12030 PF02780 Transketolase, C-terminal domain F3X89_12030 PF02779 Transketolase, pyrimidine binding domain F3X89_12035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3X89_12035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3X89_12045 PF03471 Transporter associated domain F3X89_12045 PF00999 Sodium/hydrogen exchanger family F3X89_12050 PF00162 Phosphoglycerate kinase F3X89_12055 PF00274 Fructose-bisphosphate aldolase class-I F3X89_12060 PF02567 Phenazine biosynthesis-like protein F3X89_12090 PF01197 Ribosomal protein L31 F3X89_12095 PF00664 ABC transporter transmembrane region F3X89_12095 PF00005 ABC transporter F3X89_12100 PF07411 Domain of unknown function (DUF1508) F3X89_12115 PF01389 OmpA-like transmembrane domain F3X89_12115 PF00691 OmpA family F3X89_12125 PF00459 Inositol monophosphatase family F3X89_12155 PF01022 Bacterial regulatory protein, arsR family F3X89_12170 PF00731 AIR carboxylase F3X89_12175 PF02222 ATP-grasp domain F3X89_12175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F3X89_12180 PF00444 Ribosomal protein L36 F3X89_12190 PF12697 Alpha/beta hydrolase family F3X89_12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_12195 PF03466 LysR substrate binding domain F3X89_12215 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_12220 PF01810 LysE type translocator F3X89_12225 PF00224 Pyruvate kinase, barrel domain F3X89_12225 PF02887 Pyruvate kinase, alpha/beta domain F3X89_12245 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) F3X89_12265 PF06481 COX Aromatic Rich Motif F3X89_12265 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3X89_12270 PF02630 SCO1/SenC F3X89_12275 PF04234 CopC domain F3X89_12280 PF01522 Polysaccharide deacetylase F3X89_12280 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain F3X89_12295 PF00551 Formyl transferase F3X89_12300 PF05951 Bacterial protein of unknown function (DUF882) F3X89_12305 PF00158 Sigma-54 interaction domain F3X89_12305 PF02954 Bacterial regulatory protein, Fis family F3X89_12305 PF00072 Response regulator receiver domain F3X89_12315 PF00117 Glutamine amidotransferase class-I F3X89_12315 PF00425 chorismate binding enzyme F3X89_12315 PF04715 Anthranilate synthase component I, N terminal region F3X89_12335 PF03435 Saccharopine dehydrogenase NADP binding domain F3X89_12335 PF16653 Saccharopine dehydrogenase C-terminal domain F3X89_12350 PF02872 5'-nucleotidase, C-terminal domain F3X89_12350 PF00149 Calcineurin-like phosphoesterase F3X89_12355 PF00762 Ferrochelatase F3X89_12360 PF13180 PDZ domain F3X89_12365 PF01145 SPFH domain / Band 7 family F3X89_12365 PF16200 C-terminal region of band_7 F3X89_12375 PF00571 CBS domain F3X89_12375 PF01380 SIS domain F3X89_12385 PF00483 Nucleotidyl transferase F3X89_12390 PF13406 Transglycosylase SLT domain F3X89_12405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3X89_12405 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_12410 PF04898 Glutamate synthase central domain F3X89_12410 PF00310 Glutamine amidotransferases class-II F3X89_12410 PF01493 GXGXG motif F3X89_12410 PF01645 Conserved region in glutamate synthase F3X89_12415 PF01212 Beta-eliminating lyase F3X89_12420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_12420 PF03466 LysR substrate binding domain F3X89_12425 PF13593 SBF-like CPA transporter family (DUF4137) F3X89_12430 PF00011 Hsp20/alpha crystallin family F3X89_12440 PF01037 Lrp/AsnC ligand binding domain F3X89_12440 PF13404 AsnC-type helix-turn-helix domain F3X89_12445 PF00027 Cyclic nucleotide-binding domain F3X89_12445 PF07885 Ion channel F3X89_12455 PF00459 Inositol monophosphatase family F3X89_12465 PF00072 Response regulator receiver domain F3X89_12500 PF00483 Nucleotidyl transferase F3X89_12500 PF01050 Mannose-6-phosphate isomerase F3X89_12510 PF14403 Circularly permuted ATP-grasp type 2 F3X89_12510 PF04168 A predicted alpha-helical domain with a conserved ER motif. F3X89_12515 PF08379 Bacterial transglutaminase-like N-terminal region F3X89_12515 PF01841 Transglutaminase-like superfamily F3X89_12525 PF00343 Carbohydrate phosphorylase F3X89_12530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3X89_12530 PF02806 Alpha amylase, C-terminal all-beta domain F3X89_12530 PF00128 Alpha amylase, catalytic domain F3X89_12535 PF00483 Nucleotidyl transferase F3X89_12540 PF00534 Glycosyl transferases group 1 F3X89_12540 PF08323 Starch synthase catalytic domain F3X89_12545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3X89_12545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3X89_12545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3X89_12545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3X89_12550 PF00128 Alpha amylase, catalytic domain F3X89_12550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3X89_12550 PF18390 Glycogen debranching enzyme C-terminal domain F3X89_12555 PF01575 MaoC like domain F3X89_12565 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_12565 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_12565 PF17806 Sarcosine oxidase A3 domain F3X89_12565 PF01571 Aminomethyltransferase folate-binding domain F3X89_12580 PF01266 FAD dependent oxidoreductase F3X89_12590 PF01165 Ribosomal protein S21 F3X89_12600 PF01266 FAD dependent oxidoreductase F3X89_12605 PF08447 PAS fold F3X89_12605 PF13426 PAS domain F3X89_12605 PF07536 HWE histidine kinase F3X89_12610 PF02233 NAD(P) transhydrogenase beta subunit F3X89_12615 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F3X89_12620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3X89_12620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F3X89_12630 PF08448 PAS fold F3X89_12630 PF08447 PAS fold F3X89_12630 PF00563 EAL domain F3X89_12630 PF00990 Diguanylate cyclase, GGDEF domain F3X89_12635 PF03480 Bacterial extracellular solute-binding protein, family 7 F3X89_12640 PF07722 Peptidase C26 F3X89_12645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_12645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_12650 PF00356 Bacterial regulatory proteins, lacI family F3X89_12655 PF01047 MarR family F3X89_12660 PF02633 Creatinine amidohydrolase F3X89_12665 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3X89_12665 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3X89_12675 PF00132 Bacterial transferase hexapeptide (six repeats) F3X89_12675 PF06426 Serine acetyltransferase, N-terminal F3X89_12680 PF05506 Domain of unknown function (DUF756) F3X89_12680 PF04185 Phosphoesterase family F3X89_12695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3X89_12695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F3X89_12700 PF03466 LysR substrate binding domain F3X89_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_12710 PF03824 High-affinity nickel-transport protein F3X89_12725 PF01081 KDPG and KHG aldolase F3X89_12730 PF01928 CYTH domain F3X89_12740 PF00581 Rhodanese-like domain F3X89_12740 PF17773 UPF0176 acylphosphatase like domain F3X89_12745 PF00990 Diguanylate cyclase, GGDEF domain F3X89_12745 PF00563 EAL domain F3X89_12745 PF03707 Bacterial signalling protein N terminal repeat F3X89_12750 PF03358 NADPH-dependent FMN reductase F3X89_12755 PF00232 Glycosyl hydrolase family 1 F3X89_12765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_12765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_12775 PF13407 Periplasmic binding protein domain F3X89_12780 PF02653 Branched-chain amino acid transport system / permease component F3X89_12785 PF00005 ABC transporter F3X89_12790 PF00356 Bacterial regulatory proteins, lacI family F3X89_12800 PF01261 Xylose isomerase-like TIM barrel F3X89_12805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_12805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_12810 PF00356 Bacterial regulatory proteins, lacI family F3X89_12815 PF07690 Major Facilitator Superfamily F3X89_12820 PF13533 Biotin-lipoyl like F3X89_12825 PF00440 Bacterial regulatory proteins, tetR family F3X89_12830 PF12833 Helix-turn-helix domain F3X89_12835 PF03471 Transporter associated domain F3X89_12835 PF03741 Integral membrane protein TerC family F3X89_12845 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3X89_12850 PF00152 tRNA synthetases class II (D, K and N) F3X89_12850 PF01336 OB-fold nucleic acid binding domain F3X89_12855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_12855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_12860 PF01261 Xylose isomerase-like TIM barrel F3X89_12865 PF01261 Xylose isomerase-like TIM barrel F3X89_12870 PF00356 Bacterial regulatory proteins, lacI family F3X89_12870 PF13407 Periplasmic binding protein domain F3X89_12885 PF03466 LysR substrate binding domain F3X89_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_12890 PF13416 Bacterial extracellular solute-binding protein F3X89_12895 PF08402 TOBE domain F3X89_12895 PF00005 ABC transporter F3X89_12900 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_12905 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_12910 PF00171 Aldehyde dehydrogenase family F3X89_12945 PF05336 L-rhamnose mutarotase F3X89_12950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3X89_12950 PF13378 Enolase C-terminal domain-like F3X89_12955 PF03459 TOBE domain F3X89_12955 PF17912 MalK OB fold domain F3X89_12955 PF00005 ABC transporter F3X89_12960 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_12965 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_12990 PF02515 CoA-transferase family III F3X89_12995 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3X89_13000 PF13936 Helix-turn-helix domain F3X89_13000 PF04198 Putative sugar-binding domain F3X89_13015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3X89_13015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3X89_13025 PF00730 HhH-GPD superfamily base excision DNA repair protein F3X89_13025 PF00633 Helix-hairpin-helix motif F3X89_13025 PF10576 Iron-sulfur binding domain of endonuclease III F3X89_13040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_13040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_13045 PF13419 Haloacid dehalogenase-like hydrolase F3X89_13050 PF08125 Mannitol dehydrogenase C-terminal domain F3X89_13050 PF01232 Mannitol dehydrogenase Rossmann domain F3X89_13055 PF00005 ABC transporter F3X89_13055 PF08402 TOBE domain F3X89_13060 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_13065 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_13075 PF04198 Putative sugar-binding domain F3X89_13075 PF00325 Bacterial regulatory proteins, crp family F3X89_13080 PF05025 RbsD / FucU transport protein family F3X89_13085 PF00486 Transcriptional regulatory protein, C terminal F3X89_13085 PF00072 Response regulator receiver domain F3X89_13090 PF00512 His Kinase A (phospho-acceptor) domain F3X89_13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_13095 PF00480 ROK family F3X89_13100 PF03932 CutC family F3X89_13110 PF07690 Major Facilitator Superfamily F3X89_13115 PF04293 SpoVR like protein F3X89_13120 PF04285 Protein of unknown function (DUF444) F3X89_13125 PF06798 PrkA serine protein kinase C-terminal domain F3X89_13125 PF08298 PrkA AAA domain F3X89_13140 PF03884 DNA gyrase inhibitor YacG F3X89_13145 PF02545 Maf-like protein F3X89_13150 PF01176 Translation initiation factor 1A / IF-1 F3X89_13160 PF06793 Uncharacterised protein family (UPF0262) F3X89_13165 PF00815 Histidinol dehydrogenase F3X89_13175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3X89_13200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_13205 PF00149 Calcineurin-like phosphoesterase F3X89_13210 PF00873 AcrB/AcrD/AcrF family F3X89_13215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_13235 PF02566 OsmC-like protein F3X89_13240 PF07729 FCD domain F3X89_13240 PF00392 Bacterial regulatory proteins, gntR family F3X89_13245 PF13378 Enolase C-terminal domain-like F3X89_13245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3X89_13250 PF01027 Inhibitor of apoptosis-promoting Bax1 F3X89_13260 PF08281 Sigma-70, region 4 F3X89_13260 PF04542 Sigma-70 region 2 F3X89_13265 PF01062 Bestrophin, RFP-TM, chloride channel F3X89_13270 PF01625 Peptide methionine sulfoxide reductase F3X89_13275 PF04102 SlyX F3X89_13285 PF08402 TOBE domain F3X89_13285 PF00005 ABC transporter F3X89_13290 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_13300 PF13416 Bacterial extracellular solute-binding protein F3X89_13305 PF00356 Bacterial regulatory proteins, lacI family F3X89_13320 PF01047 MarR family F3X89_13325 PF01494 FAD binding domain F3X89_13330 PF00171 Aldehyde dehydrogenase family F3X89_13335 PF00027 Cyclic nucleotide-binding domain F3X89_13335 PF13545 Crp-like helix-turn-helix domain F3X89_13360 PF01381 Helix-turn-helix F3X89_13380 PF17758 Proteasomal ATPase OB N-terminal domain F3X89_13380 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_13380 PF16450 Proteasomal ATPase OB C-terminal domain F3X89_13415 PF01048 Phosphorylase superfamily F3X89_13450 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3X89_13450 PF00753 Metallo-beta-lactamase superfamily F3X89_13455 PF02627 Carboxymuconolactone decarboxylase family F3X89_13465 PF00561 alpha/beta hydrolase fold F3X89_13470 PF00106 short chain dehydrogenase F3X89_13475 PF13493 Domain of unknown function (DUF4118) F3X89_13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_13475 PF00989 PAS fold F3X89_13475 PF08447 PAS fold F3X89_13475 PF13426 PAS domain F3X89_13475 PF00512 His Kinase A (phospho-acceptor) domain F3X89_13480 PF00072 Response regulator receiver domain F3X89_13480 PF00196 Bacterial regulatory proteins, luxR family F3X89_13485 PF00072 Response regulator receiver domain F3X89_13485 PF00196 Bacterial regulatory proteins, luxR family F3X89_13490 PF00196 Bacterial regulatory proteins, luxR family F3X89_13490 PF00072 Response regulator receiver domain F3X89_13495 PF03466 LysR substrate binding domain F3X89_13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_13545 PF08460 Bacterial SH3 domain F3X89_13545 PF01551 Peptidase family M23 F3X89_13555 PF02861 Clp amino terminal domain, pathogenicity island component F3X89_13555 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_13555 PF17871 AAA lid domain F3X89_13555 PF07724 AAA domain (Cdc48 subfamily) F3X89_13555 PF10431 C-terminal, D2-small domain, of ClpB protein F3X89_13565 PF05175 Methyltransferase small domain F3X89_13565 PF17827 PrmC N-terminal domain F3X89_13570 PF03462 PCRF domain F3X89_13570 PF00472 RF-1 domain F3X89_13575 PF00391 PEP-utilising enzyme, mobile domain F3X89_13575 PF02896 PEP-utilising enzyme, TIM barrel domain F3X89_13575 PF05524 PEP-utilising enzyme, N-terminal F3X89_13575 PF01590 GAF domain F3X89_13580 PF13840 ACT domain F3X89_13580 PF00696 Amino acid kinase family F3X89_13580 PF01842 ACT domain F3X89_13600 PF00795 Carbon-nitrogen hydrolase F3X89_13605 PF00462 Glutaredoxin F3X89_13615 PF08241 Methyltransferase domain F3X89_13630 PF00293 NUDIX domain F3X89_13640 PF01960 ArgJ family F3X89_13645 PF00639 PPIC-type PPIASE domain F3X89_13650 PF02810 SEC-C motif F3X89_13650 PF01043 SecA preprotein cross-linking domain F3X89_13650 PF07516 SecA Wing and Scaffold domain F3X89_13650 PF07517 SecA DEAD-like domain F3X89_13655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_13655 PF03466 LysR substrate binding domain F3X89_13660 PF01361 Tautomerase enzyme F3X89_13665 PF02798 Glutathione S-transferase, N-terminal domain F3X89_13680 PF00501 AMP-binding enzyme F3X89_13680 PF13193 AMP-binding enzyme C-terminal domain F3X89_13695 PF10502 Signal peptidase, peptidase S26 F3X89_13700 PF00248 Aldo/keto reductase family F3X89_13760 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3X89_13765 PF03631 Virulence factor BrkB F3X89_13770 PF00106 short chain dehydrogenase F3X89_13780 PF01923 Cobalamin adenosyltransferase F3X89_13785 PF01012 Electron transfer flavoprotein domain F3X89_13790 PF00766 Electron transfer flavoprotein FAD-binding domain F3X89_13790 PF01012 Electron transfer flavoprotein domain F3X89_13795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3X89_13795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3X89_13800 PF08534 Redoxin F3X89_13805 PF00206 Lyase F3X89_13805 PF14698 Argininosuccinate lyase C-terminal F3X89_13815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3X89_13815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F3X89_13825 PF00072 Response regulator receiver domain F3X89_13830 PF00156 Phosphoribosyl transferase domain F3X89_13840 PF00005 ABC transporter F3X89_13860 PF04752 ChaC-like protein F3X89_13875 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F3X89_13880 PF02153 Prephenate dehydrogenase F3X89_13885 PF00155 Aminotransferase class I and II F3X89_13890 PF01209 ubiE/COQ5 methyltransferase family F3X89_13895 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3X89_13895 PF00753 Metallo-beta-lactamase superfamily F3X89_13905 PF00756 Putative esterase F3X89_13905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3X89_13920 PF00830 Ribosomal L28 family F3X89_13935 PF11775 Cobalamin biosynthesis protein CobT VWA domain F3X89_13935 PF06213 Cobalamin biosynthesis protein CobT F3X89_13940 PF12556 Cobaltochelatase CobS subunit N terminal F3X89_13940 PF08406 CbbQ/NirQ/NorQ C-terminal F3X89_13940 PF07728 AAA domain (dynein-related subfamily) F3X89_13945 PF00226 DnaJ domain F3X89_13950 PF01722 BolA-like protein F3X89_13955 PF00571 CBS domain F3X89_13955 PF03471 Transporter associated domain F3X89_13955 PF01595 Cyclin M transmembrane N-terminal domain F3X89_13960 PF01761 3-dehydroquinate synthase F3X89_13965 PF01202 Shikimate kinase F3X89_13970 PF00589 Phage integrase family F3X89_13970 PF02899 Phage integrase, N-terminal SAM-like domain F3X89_13975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F3X89_13980 PF03734 L,D-transpeptidase catalytic domain F3X89_13990 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3X89_13990 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3X89_13995 PF00768 D-alanyl-D-alanine carboxypeptidase F3X89_13995 PF07943 Penicillin-binding protein 5, C-terminal domain F3X89_14000 PF07687 Peptidase dimerisation domain F3X89_14000 PF01546 Peptidase family M20/M25/M40 F3X89_14030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F3X89_14030 PF13288 DXP reductoisomerase C-terminal domain F3X89_14030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F3X89_14040 PF00155 Aminotransferase class I and II F3X89_14045 PF03450 CO dehydrogenase flavoprotein C-terminal domain F3X89_14045 PF00941 FAD binding domain in molybdopterin dehydrogenase F3X89_14050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase F3X89_14050 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain F3X89_14055 PF01799 [2Fe-2S] binding domain F3X89_14055 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_14065 PF17243 POTRA domain TamA domain 1 F3X89_14065 PF07244 Surface antigen variable number repeat F3X89_14065 PF01103 Surface antigen F3X89_14080 PF12833 Helix-turn-helix domain F3X89_14080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term F3X89_14090 PF00491 Arginase family F3X89_14095 PF00202 Aminotransferase class-III F3X89_14100 PF01584 CheW-like domain F3X89_14105 PF07690 Major Facilitator Superfamily F3X89_14115 PF02634 FdhD/NarQ family F3X89_14120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3X89_14120 PF00384 Molybdopterin oxidoreductase F3X89_14120 PF01568 Molydopterin dinucleotide binding domain F3X89_14120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F3X89_14120 PF00037 4Fe-4S binding domain F3X89_14125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3X89_14125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F3X89_14125 PF00037 4Fe-4S binding domain F3X89_14135 PF03466 LysR substrate binding domain F3X89_14135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_14145 PF01022 Bacterial regulatory protein, arsR family F3X89_14150 PF00106 short chain dehydrogenase F3X89_14155 PF08220 DeoR-like helix-turn-helix domain F3X89_14155 PF00455 DeoR C terminal sensor domain F3X89_14160 PF01266 FAD dependent oxidoreductase F3X89_14160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3X89_14165 PF09278 MerR, DNA binding F3X89_14165 PF00376 MerR family regulatory protein F3X89_14175 PF01757 Acyltransferase family F3X89_14180 PF13378 Enolase C-terminal domain-like F3X89_14180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3X89_14185 PF00171 Aldehyde dehydrogenase family F3X89_14190 PF00465 Iron-containing alcohol dehydrogenase F3X89_14195 PF03466 LysR substrate binding domain F3X89_14195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_14200 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F3X89_14205 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3X89_14205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3X89_14210 PF00231 ATP synthase F3X89_14215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3X89_14215 PF00306 ATP synthase alpha/beta chain, C terminal domain F3X89_14215 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3X89_14220 PF00213 ATP synthase delta (OSCP) subunit F3X89_14235 PF00270 DEAD/DEAH box helicase F3X89_14235 PF18074 Primosomal protein N C-terminal domain F3X89_14235 PF17764 3′ DNA-binding domain (3′BD) F3X89_14235 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F3X89_14255 PF02899 Phage integrase, N-terminal SAM-like domain F3X89_14255 PF00589 Phage integrase family F3X89_14270 PF05193 Peptidase M16 inactive domain F3X89_14270 PF00675 Insulinase (Peptidase family M16) F3X89_14275 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_14275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3X89_14280 PF01810 LysE type translocator F3X89_14300 PF00364 Biotin-requiring enzyme F3X89_14300 PF02817 e3 binding domain F3X89_14300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3X89_14310 PF16870 2-oxoglutarate dehydrogenase C-terminal F3X89_14310 PF16078 2-oxoglutarate dehydrogenase N-terminus F3X89_14310 PF02779 Transketolase, pyrimidine binding domain F3X89_14310 PF00676 Dehydrogenase E1 component F3X89_14315 PF02629 CoA binding domain F3X89_14315 PF00549 CoA-ligase F3X89_14320 PF00549 CoA-ligase F3X89_14320 PF08442 ATP-grasp domain F3X89_14325 PF00056 lactate/malate dehydrogenase, NAD binding domain F3X89_14325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3X89_14330 PF03969 AFG1-like ATPase F3X89_14335 PF02974 Protease inhibitor Inh F3X89_14340 PF13085 2Fe-2S iron-sulfur cluster binding domain F3X89_14340 PF13237 4Fe-4S dicluster domain F3X89_14345 PF00890 FAD binding domain F3X89_14345 PF02910 Fumarate reductase flavoprotein C-term F3X89_14355 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F3X89_14375 PF03795 YCII-related domain F3X89_14380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F3X89_14380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F3X89_14385 PF00814 Glycoprotease family F3X89_14390 PF03900 Porphobilinogen deaminase, C-terminal domain F3X89_14390 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F3X89_14430 PF02325 YGGT family F3X89_14435 PF02594 Uncharacterised ACR, YggU family COG1872 F3X89_14440 PF00719 Inorganic pyrophosphatase F3X89_14450 PF00679 Elongation factor G C-terminus F3X89_14450 PF03144 Elongation factor Tu domain 2 F3X89_14450 PF00009 Elongation factor Tu GTP binding domain F3X89_14455 PF03764 Elongation factor G, domain IV F3X89_14455 PF00009 Elongation factor Tu GTP binding domain F3X89_14455 PF00679 Elongation factor G C-terminus F3X89_14460 PF01432 Peptidase family M3 F3X89_14470 PF01047 MarR family F3X89_14475 PF00764 Arginosuccinate synthase F3X89_14480 PF00106 short chain dehydrogenase F3X89_14485 PF01810 LysE type translocator F3X89_14495 PF04055 Radical SAM superfamily F3X89_14510 PF01329 Pterin 4 alpha carbinolamine dehydratase F3X89_14515 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3X89_14520 PF02834 LigT like Phosphoesterase F3X89_14525 PF13472 GDSL-like Lipase/Acylhydrolase family F3X89_14530 PF00005 ABC transporter F3X89_14540 PF01027 Inhibitor of apoptosis-promoting Bax1 F3X89_14565 PF00330 Aconitase family (aconitate hydratase) F3X89_14565 PF00694 Aconitase C-terminal domain F3X89_14570 PF00005 ABC transporter F3X89_14575 PF03379 CcmB protein F3X89_14580 PF01578 Cytochrome C assembly protein F3X89_14585 PF04995 Heme exporter protein D (CcmD) F3X89_14590 PF08534 Redoxin F3X89_14595 PF10755 Protein of unknown function (DUF2585) F3X89_14600 PF04279 Intracellular septation protein A F3X89_14605 PF02881 SRP54-type protein, helical bundle domain F3X89_14605 PF00448 SRP54-type protein, GTPase domain F3X89_14610 PF00919 Uncharacterized protein family UPF0004 F3X89_14610 PF04055 Radical SAM superfamily F3X89_14615 PF01678 Diaminopimelate epimerase F3X89_14625 PF12706 Beta-lactamase superfamily domain F3X89_14640 PF00448 SRP54-type protein, GTPase domain F3X89_14640 PF02978 Signal peptide binding domain F3X89_14640 PF02881 SRP54-type protein, helical bundle domain F3X89_14645 PF02153 Prephenate dehydrogenase F3X89_14645 PF01817 Chorismate mutase type II F3X89_14650 PF00886 Ribosomal protein S16 F3X89_14655 PF05239 PRC-barrel domain F3X89_14655 PF01782 RimM N-terminal domain F3X89_14660 PF01746 tRNA (Guanine-1)-methyltransferase F3X89_14675 PF03358 NADPH-dependent FMN reductase F3X89_14695 PF01037 Lrp/AsnC ligand binding domain F3X89_14700 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_14700 PF00585 C-terminal regulatory domain of Threonine dehydratase F3X89_14705 PF12464 Maltose acetyltransferase F3X89_14705 PF14602 Hexapeptide repeat of succinyl-transferase F3X89_14710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3X89_14710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3X89_14715 PF01245 Ribosomal protein L19 F3X89_14720 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_14725 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_14730 PF00330 Aconitase family (aconitate hydratase) F3X89_14735 PF00892 EamA-like transporter family F3X89_14740 PF01047 MarR family F3X89_14745 PF03466 LysR substrate binding domain F3X89_14745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_14760 PF00248 Aldo/keto reductase family F3X89_14770 PF00486 Transcriptional regulatory protein, C terminal F3X89_14770 PF00072 Response regulator receiver domain F3X89_14785 PF03548 Outer membrane lipoprotein carrier protein LolA F3X89_14790 PF17854 FtsK alpha domain F3X89_14790 PF09397 Ftsk gamma domain F3X89_14790 PF01580 FtsK/SpoIIIE family F3X89_14790 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F3X89_14795 PF00909 Ammonium Transporter Family F3X89_14800 PF00543 Nitrogen regulatory protein P-II F3X89_14810 PF01494 FAD binding domain F3X89_14815 PF01638 HxlR-like helix-turn-helix F3X89_14830 PF03966 Trm112p-like protein F3X89_14840 PF00085 Thioredoxin F3X89_14860 PF08402 TOBE domain F3X89_14860 PF00005 ABC transporter F3X89_14865 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_14870 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_14880 PF08531 Alpha-L-rhamnosidase N-terminal domain F3X89_14880 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain F3X89_14880 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain F3X89_14880 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain F3X89_14885 PF00356 Bacterial regulatory proteins, lacI family F3X89_14895 PF00873 AcrB/AcrD/AcrF family F3X89_14900 PF13533 Biotin-lipoyl like F3X89_14905 PF00486 Transcriptional regulatory protein, C terminal F3X89_14905 PF00072 Response regulator receiver domain F3X89_14910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_14910 PF00672 HAMP domain F3X89_14910 PF16527 Two-component sensor protein CpxA, periplasmic domain F3X89_14910 PF00512 His Kinase A (phospho-acceptor) domain F3X89_14930 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase F3X89_14935 PF05199 GMC oxidoreductase F3X89_14935 PF00732 GMC oxidoreductase F3X89_14940 PF00034 Cytochrome c F3X89_14940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F3X89_14950 PF00171 Aldehyde dehydrogenase family F3X89_14970 PF00892 EamA-like transporter family F3X89_14980 PF12146 Serine aminopeptidase, S33 F3X89_14990 PF00892 EamA-like transporter family F3X89_15000 PF00202 Aminotransferase class-III F3X89_15010 PF00512 His Kinase A (phospho-acceptor) domain F3X89_15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_15015 PF00072 Response regulator receiver domain F3X89_15015 PF00486 Transcriptional regulatory protein, C terminal F3X89_15020 PF04909 Amidohydrolase F3X89_15025 PF07690 Major Facilitator Superfamily F3X89_15030 PF07702 UTRA domain F3X89_15030 PF00392 Bacterial regulatory proteins, gntR family F3X89_15035 PF03466 LysR substrate binding domain F3X89_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_15045 PF00155 Aminotransferase class I and II F3X89_15045 PF00392 Bacterial regulatory proteins, gntR family F3X89_15050 PF00892 EamA-like transporter family F3X89_15060 PF00440 Bacterial regulatory proteins, tetR family F3X89_15080 PF02615 Malate/L-lactate dehydrogenase F3X89_15095 PF13439 Glycosyltransferase Family 4 F3X89_15095 PF00534 Glycosyl transferases group 1 F3X89_15115 PF00486 Transcriptional regulatory protein, C terminal F3X89_15115 PF00072 Response regulator receiver domain F3X89_15120 PF00512 His Kinase A (phospho-acceptor) domain F3X89_15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_15130 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15135 PF00005 ABC transporter F3X89_15150 PF01381 Helix-turn-helix F3X89_15165 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F3X89_15185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_15185 PF00529 HlyD membrane-fusion protein of T1SS F3X89_15190 PF00873 AcrB/AcrD/AcrF family F3X89_15195 PF00873 AcrB/AcrD/AcrF family F3X89_15200 PF00873 AcrB/AcrD/AcrF family F3X89_15205 PF13533 Biotin-lipoyl like F3X89_15210 PF07756 Protein of unknown function (DUF1612) F3X89_15210 PF11972 HTH DNA binding domain F3X89_15215 PF04945 YHS domain F3X89_15220 PF09278 MerR, DNA binding F3X89_15220 PF00376 MerR family regulatory protein F3X89_15230 PF00108 Thiolase, N-terminal domain F3X89_15230 PF02803 Thiolase, C-terminal domain F3X89_15240 PF01850 PIN domain F3X89_15250 PF07690 Major Facilitator Superfamily F3X89_15255 PF00174 Oxidoreductase molybdopterin binding domain F3X89_15265 PF05962 HutD F3X89_15270 PF17392 Urocanase C-terminal domain F3X89_15270 PF17391 Urocanase N-terminal domain F3X89_15270 PF01175 Urocanase Rossmann-like domain F3X89_15275 PF00221 Aromatic amino acid lyase F3X89_15280 PF01979 Amidohydrolase family F3X89_15285 PF01979 Amidohydrolase family F3X89_15290 PF00392 Bacterial regulatory proteins, gntR family F3X89_15290 PF07702 UTRA domain F3X89_15300 PF00221 Aromatic amino acid lyase F3X89_15320 PF00999 Sodium/hydrogen exchanger family F3X89_15325 PF00873 AcrB/AcrD/AcrF family F3X89_15330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_15335 PF00440 Bacterial regulatory proteins, tetR family F3X89_15335 PF08361 MAATS-type transcriptional repressor, C-terminal region F3X89_15345 PF02742 Iron dependent repressor, metal binding and dimerisation domain F3X89_15345 PF01325 Iron dependent repressor, N-terminal DNA binding domain F3X89_15350 PF01566 Natural resistance-associated macrophage protein F3X89_15355 PF01551 Peptidase family M23 F3X89_15370 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase F3X89_15370 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain F3X89_15375 PF03450 CO dehydrogenase flavoprotein C-terminal domain F3X89_15375 PF00941 FAD binding domain in molybdopterin dehydrogenase F3X89_15380 PF10518 TAT (twin-arginine translocation) pathway signal sequence F3X89_15380 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_15380 PF01799 [2Fe-2S] binding domain F3X89_15385 PF17925 Tetracyclin repressor-like, C-terminal domain F3X89_15385 PF00440 Bacterial regulatory proteins, tetR family F3X89_15395 PF17912 MalK OB fold domain F3X89_15395 PF00005 ABC transporter F3X89_15395 PF03459 TOBE domain F3X89_15400 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15405 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15435 PF01544 CorA-like Mg2+ transporter protein F3X89_15440 PF00005 ABC transporter F3X89_15440 PF17912 MalK OB fold domain F3X89_15445 PF17912 MalK OB fold domain F3X89_15445 PF00005 ABC transporter F3X89_15450 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15455 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15470 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) F3X89_15475 PF13416 Bacterial extracellular solute-binding protein F3X89_15480 PF00356 Bacterial regulatory proteins, lacI family F3X89_15490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_15490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_15500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_15500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_15510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_15510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_15515 PF17938 Tetracyclin repressor-like, C-terminal domain F3X89_15515 PF00440 Bacterial regulatory proteins, tetR family F3X89_15525 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15530 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_15535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_15540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_15540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_15545 PF00005 ABC transporter F3X89_15545 PF17912 MalK OB fold domain F3X89_15570 PF00550 Phosphopantetheine attachment site F3X89_15575 PF12544 Lysine-2,3-aminomutase F3X89_15575 PF04055 Radical SAM superfamily F3X89_15580 PF00152 tRNA synthetases class II (D, K and N) F3X89_15585 PF09285 Elongation factor P, C-terminal F3X89_15585 PF01132 Elongation factor P (EF-P) OB domain F3X89_15585 PF08207 Elongation factor P (EF-P) KOW-like domain F3X89_15590 PF06472 ABC transporter transmembrane region 2 F3X89_15590 PF00005 ABC transporter F3X89_15595 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_15595 PF07724 AAA domain (Cdc48 subfamily) F3X89_15595 PF17871 AAA lid domain F3X89_15595 PF02861 Clp amino terminal domain, pathogenicity island component F3X89_15595 PF10431 C-terminal, D2-small domain, of ClpB protein F3X89_15605 PF04204 Homoserine O-succinyltransferase F3X89_15630 PF00392 Bacterial regulatory proteins, gntR family F3X89_15630 PF07702 UTRA domain F3X89_15635 PF01380 SIS domain F3X89_15640 PF01979 Amidohydrolase family F3X89_15645 PF13580 SIS domain F3X89_15650 PF00873 AcrB/AcrD/AcrF family F3X89_15655 PF13533 Biotin-lipoyl like F3X89_15660 PF16326 ABC transporter C-terminal domain F3X89_15660 PF00005 ABC transporter F3X89_15675 PF07690 Major Facilitator Superfamily F3X89_15680 PF01547 Bacterial extracellular solute-binding protein F3X89_15685 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15690 PF00005 ABC transporter F3X89_15695 PF01435 Peptidase family M48 F3X89_15700 PF00140 Sigma-70 factor, region 1.2 F3X89_15700 PF04542 Sigma-70 region 2 F3X89_15700 PF04545 Sigma-70, region 4 F3X89_15705 PF02559 CarD-like/TRCF domain F3X89_15710 PF00037 4Fe-4S binding domain F3X89_15710 PF11953 Domain of unknown function (DUF3470) F3X89_15740 PF00108 Thiolase, N-terminal domain F3X89_15740 PF02803 Thiolase, C-terminal domain F3X89_15745 PF07879 PHB/PHA accumulation regulator DNA-binding domain F3X89_15745 PF05233 PHB accumulation regulatory domain F3X89_15750 PF01783 Ribosomal L32p protein family F3X89_15760 PF00912 Transglycosylase F3X89_15765 PF00348 Polyprenyl synthetase F3X89_15775 PF04551 GcpE protein F3X89_15780 PF07690 Major Facilitator Superfamily F3X89_15785 PF00892 EamA-like transporter family F3X89_15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_15795 PF03466 LysR substrate binding domain F3X89_15805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_15805 PF03466 LysR substrate binding domain F3X89_15810 PF07883 Cupin domain F3X89_15825 PF00574 Clp protease F3X89_15830 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_15835 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15840 PF00005 ABC transporter F3X89_15845 PF00413 Matrixin F3X89_15845 PF08548 Peptidase M10 serralysin C terminal F3X89_15845 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) F3X89_15850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_15850 PF00529 HlyD membrane-fusion protein of T1SS F3X89_15855 PF00664 ABC transporter transmembrane region F3X89_15855 PF00005 ABC transporter F3X89_15860 PF00753 Metallo-beta-lactamase superfamily F3X89_15865 PF00682 HMGL-like F3X89_15865 PF00364 Biotin-requiring enzyme F3X89_15865 PF02785 Biotin carboxylase C-terminal domain F3X89_15865 PF00289 Biotin carboxylase, N-terminal domain F3X89_15865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_15865 PF02436 Conserved carboxylase domain F3X89_15875 PF00664 ABC transporter transmembrane region F3X89_15875 PF00005 ABC transporter F3X89_15880 PF02530 Porin subfamily F3X89_15890 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain F3X89_15890 PF06165 Glycosyltransferase family 36 F3X89_15890 PF10091 Putative glucoamylase F3X89_15905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_15905 PF00005 ABC transporter F3X89_15910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_15910 PF00005 ABC transporter F3X89_15915 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_15915 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15920 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_15925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_15930 PF01244 Membrane dipeptidase (Peptidase family M19) F3X89_15935 PF01810 LysE type translocator F3X89_15940 PF00404 Dockerin type I domain F3X89_15940 PF00150 Cellulase (glycosyl hydrolase family 5) F3X89_15960 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F3X89_15965 PF09386 Antitoxin ParD F3X89_15995 PF13657 HipA N-terminal domain F3X89_15995 PF07804 HipA-like C-terminal domain F3X89_16015 PF13332 Hemagglutinin repeat F3X89_16015 PF05860 haemagglutination activity domain F3X89_16015 PF05594 Haemagluttinin repeat F3X89_16015 PF04829 Pre-toxin domain with VENN motif F3X89_16030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F3X89_16030 PF17287 POTRA domain F3X89_16030 PF08479 POTRA domain, ShlB-type F3X89_16060 PF02653 Branched-chain amino acid transport system / permease component F3X89_16065 PF00005 ABC transporter F3X89_16070 PF13407 Periplasmic binding protein domain F3X89_16080 PF16347 Domain of unknown function (DUF4976) F3X89_16080 PF00884 Sulfatase F3X89_16085 PF16363 GDP-mannose 4,6 dehydratase F3X89_16090 PF03389 MobA/MobL family F3X89_16090 PF17841 BID domain of Bartonella effector protein (Bep) F3X89_16090 PF01443 Viral (Superfamily 1) RNA helicase F3X89_16095 PF07820 TraC-like protein F3X89_16100 PF06412 Conjugal transfer protein TraD F3X89_16115 PF01292 Prokaryotic cytochrome b561 F3X89_16120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3X89_16120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3X89_16120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3X89_16125 PF01370 NAD dependent epimerase/dehydratase family F3X89_16130 PF02397 Bacterial sugar transferase F3X89_16140 PF00437 Type II/IV secretion system protein F3X89_16145 PF03743 Bacterial conjugation TrbI-like protein F3X89_16150 PF03524 Conjugal transfer protein F3X89_16155 PF04335 VirB8 protein F3X89_16165 PF04610 TrbL/VirB6 plasmid conjugal transfer protein F3X89_16180 PF03135 CagE, TrbE, VirB family, component of type IV transporter system F3X89_16185 PF05101 Type IV secretory pathway, VirB3-like protein F3X89_16190 PF04956 TrbC/VIRB2 family F3X89_16195 PF01464 Transglycosylase SLT domain F3X89_16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_16210 PF03466 LysR substrate binding domain F3X89_16215 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_16220 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_16225 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_16235 PF01381 Helix-turn-helix F3X89_16240 PF01381 Helix-turn-helix F3X89_16270 PF02311 AraC-like ligand binding domain F3X89_16270 PF12833 Helix-turn-helix domain F3X89_16290 PF02534 Type IV secretory system Conjugative DNA transfer F3X89_16295 PF00534 Glycosyl transferases group 1 F3X89_16295 PF11380 Stealth protein CR2, conserved region 2 F3X89_16295 PF17101 Stealth protein CR1, conserved region 1 F3X89_16295 PF17102 Stealth protein CR3, conserved region 3 F3X89_16295 PF17103 Stealth protein CR4, conserved region 4 F3X89_16300 PF13439 Glycosyltransferase Family 4 F3X89_16300 PF00534 Glycosyl transferases group 1 F3X89_16315 PF16363 GDP-mannose 4,6 dehydratase F3X89_16325 PF00483 Nucleotidyl transferase F3X89_16325 PF01050 Mannose-6-phosphate isomerase F3X89_16330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase F3X89_16335 PF00483 Nucleotidyl transferase F3X89_16340 PF04321 RmlD substrate binding domain F3X89_16345 PF16363 GDP-mannose 4,6 dehydratase F3X89_16350 PF00535 Glycosyl transferase family 2 F3X89_16355 PF00005 ABC transporter F3X89_16360 PF01061 ABC-2 type transporter F3X89_16400 PF04542 Sigma-70 region 2 F3X89_16400 PF04545 Sigma-70, region 4 F3X89_16415 PF05114 Protein of unknown function (DUF692) F3X89_16440 PF01050 Mannose-6-phosphate isomerase F3X89_16440 PF00483 Nucleotidyl transferase F3X89_16455 PF00158 Sigma-54 interaction domain F3X89_16455 PF06956 Regulator of RNA terminal phosphate cyclase F3X89_16465 PF00829 Ribosomal prokaryotic L21 protein F3X89_16470 PF01016 Ribosomal L27 protein F3X89_16485 PF01926 50S ribosome-binding GTPase F3X89_16485 PF01018 GTP1/OBG F3X89_16490 PF01472 PUA domain F3X89_16490 PF00696 Amino acid kinase family F3X89_16495 PF00171 Aldehyde dehydrogenase family F3X89_16500 PF01467 Cytidylyltransferase-like F3X89_16510 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_16515 PF00005 ABC transporter F3X89_16515 PF03459 TOBE domain F3X89_16520 PF03459 TOBE domain F3X89_16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_16530 PF02590 Predicted SPOUT methyltransferase F3X89_16540 PF03572 Peptidase family S41 F3X89_16540 PF13180 PDZ domain F3X89_16550 PF00293 NUDIX domain F3X89_16555 PF00210 Ferritin-like domain F3X89_16565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3X89_16565 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3X89_16565 PF01336 OB-fold nucleic acid binding domain F3X89_16565 PF02811 PHP domain F3X89_16565 PF14579 Helix-hairpin-helix motif F3X89_16590 PF03328 HpcH/HpaI aldolase/citrate lyase family F3X89_16600 PF00694 Aconitase C-terminal domain F3X89_16610 PF00180 Isocitrate/isopropylmalate dehydrogenase F3X89_16615 PF01569 PAP2 superfamily F3X89_16630 PF00210 Ferritin-like domain F3X89_16635 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3X89_16635 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3X89_16645 PF00484 Carbonic anhydrase F3X89_16650 PF08543 Phosphomethylpyrimidine kinase F3X89_16655 PF05088 Bacterial NAD-glutamate dehydrogenase F3X89_16660 PF11700 Vacuole effluxer Atg22 like F3X89_16665 PF02142 MGS-like domain F3X89_16665 PF01808 AICARFT/IMPCHase bienzyme F3X89_16675 PF01189 16S rRNA methyltransferase RsmB/F F3X89_16675 PF01029 NusB family F3X89_16680 PF01435 Peptidase family M48 F3X89_16690 PF00501 AMP-binding enzyme F3X89_16690 PF13193 AMP-binding enzyme C-terminal domain F3X89_16690 PF16177 Acetyl-coenzyme A synthetase N-terminus F3X89_16700 PF01168 Alanine racemase, N-terminal domain F3X89_16705 PF13603 Leucyl-tRNA synthetase, Domain 2 F3X89_16705 PF00133 tRNA synthetases class I (I, L, M and V) F3X89_16705 PF08264 Anticodon-binding domain of tRNA F3X89_16720 PF02195 ParB-like nuclease domain F3X89_16720 PF17762 HTH domain found in ParB protein F3X89_16725 PF13614 AAA domain F3X89_16730 PF02527 rRNA small subunit methyltransferase G F3X89_16735 PF01134 Glucose inhibited division protein A F3X89_16735 PF13932 GidA associated domain F3X89_16740 PF01926 50S ribosome-binding GTPase F3X89_16740 PF10396 GTP-binding protein TrmE N-terminus F3X89_16740 PF12631 MnmE helical domain F3X89_16745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3X89_16745 PF07497 Rho termination factor, RNA-binding domain F3X89_16745 PF07498 Rho termination factor, N-terminal domain F3X89_16750 PF03653 Uncharacterised protein family (UPF0093) F3X89_16755 PF01208 Uroporphyrinogen decarboxylase (URO-D) F3X89_16760 PF03618 Kinase/pyrophosphorylase F3X89_16765 PF02545 Maf-like protein F3X89_16770 PF01488 Shikimate / quinate 5-dehydrogenase F3X89_16770 PF08501 Shikimate dehydrogenase substrate binding domain F3X89_16770 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3X89_16775 PF01121 Dephospho-CoA kinase F3X89_16780 PF00929 Exonuclease F3X89_16785 PF01810 LysE type translocator F3X89_16790 PF02556 Preprotein translocase subunit SecB F3X89_16795 PF04186 FxsA cytoplasmic membrane protein F3X89_16805 PF03562 MltA specific insert domain F3X89_16805 PF06725 3D domain F3X89_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_16820 PF01751 Toprim domain F3X89_16820 PF00204 DNA gyrase B F3X89_16820 PF00986 DNA gyrase B subunit, carboxyl terminus F3X89_16825 PF00881 Nitroreductase family F3X89_16840 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3X89_16860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F3X89_16865 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_16870 PF00290 Tryptophan synthase alpha chain F3X89_16875 PF01039 Carboxyl transferase domain F3X89_16880 PF08245 Mur ligase middle domain F3X89_16880 PF02875 Mur ligase family, glutamate ligase domain F3X89_16885 PF00085 Thioredoxin F3X89_16890 PF13361 UvrD-like helicase C-terminal domain F3X89_16890 PF00580 UvrD/REP helicase N-terminal domain F3X89_16890 PF12705 PD-(D/E)XK nuclease superfamily F3X89_16900 PF12804 MobA-like NTP transferase domain F3X89_16905 PF01636 Phosphotransferase enzyme family F3X89_16910 PF00512 His Kinase A (phospho-acceptor) domain F3X89_16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_16915 PF05221 S-adenosyl-L-homocysteine hydrolase F3X89_16915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F3X89_16920 PF00381 PTS HPr component phosphorylation site F3X89_16925 PF03610 PTS system fructose IIA component F3X89_16925 PF03830 PTS system sorbose subfamily IIB component F3X89_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_16935 PF00512 His Kinase A (phospho-acceptor) domain F3X89_16935 PF13755 Sensor N-terminal transmembrane domain F3X89_16935 PF00672 HAMP domain F3X89_16935 PF13756 Stimulus-sensing domain F3X89_16940 PF00486 Transcriptional regulatory protein, C terminal F3X89_16940 PF00072 Response regulator receiver domain F3X89_16945 PF01293 Phosphoenolpyruvate carboxykinase F3X89_16950 PF00472 RF-1 domain F3X89_16955 PF13532 2OG-Fe(II) oxygenase superfamily F3X89_16965 PF00485 Phosphoribulokinase / Uridine kinase family F3X89_16970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F3X89_16975 PF00977 Histidine biosynthesis protein F3X89_16980 PF00977 Histidine biosynthesis protein F3X89_16985 PF00117 Glutamine amidotransferase class-I F3X89_16995 PF00475 Imidazoleglycerol-phosphate dehydratase F3X89_17000 PF00227 Proteasome subunit F3X89_17005 PF07724 AAA domain (Cdc48 subfamily) F3X89_17005 PF10431 C-terminal, D2-small domain, of ClpB protein F3X89_17005 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_17015 PF00067 Cytochrome P450 F3X89_17020 PF05378 Hydantoinase/oxoprolinase N-terminal region F3X89_17020 PF01968 Hydantoinase/oxoprolinase F3X89_17025 PF01274 Malate synthase F3X89_17040 PF00072 Response regulator receiver domain F3X89_17045 PF00512 His Kinase A (phospho-acceptor) domain F3X89_17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_17050 PF00270 DEAD/DEAH box helicase F3X89_17050 PF04408 Helicase associated domain (HA2) F3X89_17050 PF00271 Helicase conserved C-terminal domain F3X89_17050 PF08482 ATP-dependent helicase C-terminal F3X89_17055 PF02423 Ornithine cyclodeaminase/mu-crystallin family F3X89_17115 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB F3X89_17115 PF08479 POTRA domain, ShlB-type F3X89_17115 PF17287 POTRA domain F3X89_17145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_17145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_17150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_17150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_17150 PF01842 ACT domain F3X89_17155 PF03328 HpcH/HpaI aldolase/citrate lyase family F3X89_17160 PF00171 Aldehyde dehydrogenase family F3X89_17165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_17165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_17170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3X89_17170 PF00205 Thiamine pyrophosphate enzyme, central domain F3X89_17170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3X89_17175 PF01261 Xylose isomerase-like TIM barrel F3X89_17190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_17190 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_17195 PF00356 Bacterial regulatory proteins, lacI family F3X89_17205 PF02653 Branched-chain amino acid transport system / permease component F3X89_17210 PF00005 ABC transporter F3X89_17215 PF02653 Branched-chain amino acid transport system / permease component F3X89_17220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_17220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_17225 PF01261 Xylose isomerase-like TIM barrel F3X89_17235 PF01593 Flavin containing amine oxidoreductase F3X89_17240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3X89_17240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3X89_17245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_17245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_17250 PF00005 ABC transporter F3X89_17250 PF17912 MalK OB fold domain F3X89_17255 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_17260 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_17265 PF01547 Bacterial extracellular solute-binding protein F3X89_17275 PF01261 Xylose isomerase-like TIM barrel F3X89_17280 PF05425 Copper resistance protein D F3X89_17285 PF04234 CopC domain F3X89_17290 PF00149 Calcineurin-like phosphoesterase F3X89_17295 PF00171 Aldehyde dehydrogenase family F3X89_17300 PF00202 Aminotransferase class-III F3X89_17320 PF00575 S1 RNA binding domain F3X89_17325 PF02224 Cytidylate kinase F3X89_17330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3X89_17345 PF00069 Protein kinase domain F3X89_17345 PF03793 PASTA domain F3X89_17395 PF02796 Helix-turn-helix domain of resolvase F3X89_17395 PF00239 Resolvase, N terminal domain F3X89_17445 PF06912 Protein of unknown function (DUF1275) F3X89_17465 PF03458 UPF0126 domain F3X89_17475 PF07977 FabA-like domain F3X89_17480 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_17480 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_17490 PF13302 Acetyltransferase (GNAT) domain F3X89_17500 PF05175 Methyltransferase small domain F3X89_17500 PF08468 Methyltransferase small domain N-terminal F3X89_17505 PF01138 3' exoribonuclease family, domain 1 F3X89_17505 PF00575 S1 RNA binding domain F3X89_17505 PF03725 3' exoribonuclease family, domain 2 F3X89_17505 PF00013 KH domain F3X89_17505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F3X89_17510 PF00312 Ribosomal protein S15 F3X89_17515 PF00561 alpha/beta hydrolase fold F3X89_17520 PF16198 tRNA pseudouridylate synthase B C-terminal domain F3X89_17520 PF01509 TruB family pseudouridylate synthase (N terminal domain) F3X89_17520 PF09157 Pseudouridine synthase II TruB, C-terminal F3X89_17525 PF02033 Ribosome-binding factor A F3X89_17530 PF04760 Translation initiation factor IF-2, N-terminal region F3X89_17530 PF08364 Bacterial translation initiation factor IF-2 associated region F3X89_17530 PF11987 Translation-initiation factor 2 F3X89_17530 PF00009 Elongation factor Tu GTP binding domain F3X89_17540 PF08529 NusA N-terminal domain F3X89_17540 PF00575 S1 RNA binding domain F3X89_17540 PF13184 NusA-like KH domain F3X89_17545 PF17384 RimP C-terminal SH3 domain F3X89_17545 PF02576 RimP N-terminal domain F3X89_17550 PF13406 Transglycosylase SLT domain F3X89_17555 PF13662 Toprim domain F3X89_17555 PF02132 RecR protein F3X89_17570 PF01037 Lrp/AsnC ligand binding domain F3X89_17575 PF02575 YbaB/EbfC DNA-binding family F3X89_17580 PF12170 DNA polymerase III tau subunit V interacting with alpha F3X89_17580 PF12169 DNA polymerase III subunits gamma and tau domain III F3X89_17580 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F3X89_17590 PF01230 HIT domain F3X89_17595 PF09297 NADH pyrophosphatase zinc ribbon domain F3X89_17595 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain F3X89_17595 PF00293 NUDIX domain F3X89_17600 PF08279 HTH domain F3X89_17600 PF13280 WYL domain F3X89_17615 PF01817 Chorismate mutase type II F3X89_17615 PF00800 Prephenate dehydratase F3X89_17620 PF02348 Cytidylyltransferase F3X89_17625 PF00034 Cytochrome c F3X89_17640 PF00294 pfkB family carbohydrate kinase F3X89_17655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_17655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_17660 PF01209 ubiE/COQ5 methyltransferase family F3X89_17670 PF00899 ThiF family F3X89_17670 PF00581 Rhodanese-like domain F3X89_17675 PF02463 RecF/RecN/SMC N terminal domain F3X89_17680 PF01556 DnaJ C terminal domain F3X89_17680 PF00226 DnaJ domain F3X89_17680 PF00684 DnaJ central domain F3X89_17685 PF00012 Hsp70 protein F3X89_17690 PF00905 Penicillin binding protein transpeptidase domain F3X89_17690 PF00912 Transglycosylase F3X89_17710 PF02321 Outer membrane efflux protein F3X89_17715 PF01259 SAICAR synthetase F3X89_17725 PF01479 S4 domain F3X89_17725 PF00849 RNA pseudouridylate synthase F3X89_17730 PF00072 Response regulator receiver domain F3X89_17730 PF00486 Transcriptional regulatory protein, C terminal F3X89_17735 PF00512 His Kinase A (phospho-acceptor) domain F3X89_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_17735 PF00672 HAMP domain F3X89_17735 PF16527 Two-component sensor protein CpxA, periplasmic domain F3X89_17775 PF00672 HAMP domain F3X89_17775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_17780 PF00005 ABC transporter F3X89_17780 PF08402 TOBE domain F3X89_17790 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_17795 PF13416 Bacterial extracellular solute-binding protein F3X89_17800 PF01979 Amidohydrolase family F3X89_17800 PF13382 Adenine deaminase C-terminal domain F3X89_17810 PF00563 EAL domain F3X89_17810 PF05231 MASE1 F3X89_17820 PF05443 ROS/MUCR transcriptional regulator protein F3X89_17825 PF01384 Phosphate transporter family F3X89_17860 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F3X89_17865 PF00510 Cytochrome c oxidase subunit III F3X89_17870 PF00115 Cytochrome C and Quinol oxidase polypeptide I F3X89_17875 PF06481 COX Aromatic Rich Motif F3X89_17875 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3X89_17880 PF07690 Major Facilitator Superfamily F3X89_17880 PF00083 Sugar (and other) transporter F3X89_17890 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_17895 PF00005 ABC transporter F3X89_17900 PF07687 Peptidase dimerisation domain F3X89_17900 PF01546 Peptidase family M20/M25/M40 F3X89_17905 PF13382 Adenine deaminase C-terminal domain F3X89_17905 PF01979 Amidohydrolase family F3X89_17915 PF07687 Peptidase dimerisation domain F3X89_17915 PF01546 Peptidase family M20/M25/M40 F3X89_17920 PF13188 PAS domain F3X89_17920 PF03707 Bacterial signalling protein N terminal repeat F3X89_17920 PF00990 Diguanylate cyclase, GGDEF domain F3X89_17920 PF00563 EAL domain F3X89_17930 PF00476 DNA polymerase family A F3X89_17930 PF01367 5'-3' exonuclease, C-terminal SAM fold F3X89_17930 PF01612 3'-5' exonuclease F3X89_17930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3X89_17935 PF00625 Guanylate kinase F3X89_17940 PF07969 Amidohydrolase family F3X89_17945 PF06299 Protein of unknown function (DUF1045) F3X89_17950 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_17955 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_17965 PF00005 ABC transporter F3X89_17980 PF00005 ABC transporter F3X89_17985 PF00005 ABC transporter F3X89_17990 PF06007 Phosphonate metabolism protein PhnJ F3X89_17995 PF05861 Bacterial phosphonate metabolism protein (PhnI) F3X89_18000 PF05845 Bacterial phosphonate metabolism protein (PhnH) F3X89_18005 PF06754 Phosphonate metabolism protein PhnG F3X89_18010 PF00392 Bacterial regulatory proteins, gntR family F3X89_18010 PF07702 UTRA domain F3X89_18015 PF00300 Histidine phosphatase superfamily (branch 1) F3X89_18020 PF01113 Dihydrodipicolinate reductase, N-terminus F3X89_18020 PF05173 Dihydrodipicolinate reductase, C-terminus F3X89_18025 PF00664 ABC transporter transmembrane region F3X89_18025 PF00005 ABC transporter F3X89_18030 PF02685 Glucokinase F3X89_18035 PF02142 MGS-like domain F3X89_18040 PF03411 Penicillin-insensitive murein endopeptidase F3X89_18045 PF00440 Bacterial regulatory proteins, tetR family F3X89_18050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_18055 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_18060 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_18060 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_18065 PF00005 ABC transporter F3X89_18065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_18070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_18075 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F3X89_18075 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F3X89_18095 PF00924 Mechanosensitive ion channel F3X89_18100 PF00356 Bacterial regulatory proteins, lacI family F3X89_18100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3X89_18115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3X89_18120 PF12146 Serine aminopeptidase, S33 F3X89_18130 PF12833 Helix-turn-helix domain F3X89_18150 PF03466 LysR substrate binding domain F3X89_18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18160 PF07690 Major Facilitator Superfamily F3X89_18165 PF01638 HxlR-like helix-turn-helix F3X89_18170 PF00248 Aldo/keto reductase family F3X89_18175 PF03466 LysR substrate binding domain F3X89_18175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18200 PF02608 ABC transporter substrate-binding protein PnrA-like F3X89_18205 PF00005 ABC transporter F3X89_18210 PF02653 Branched-chain amino acid transport system / permease component F3X89_18215 PF02653 Branched-chain amino acid transport system / permease component F3X89_18220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3X89_18225 PF01048 Phosphorylase superfamily F3X89_18230 PF01791 DeoC/LacD family aldolase F3X89_18235 PF02885 Glycosyl transferase family, helical bundle domain F3X89_18235 PF00591 Glycosyl transferase family, a/b domain F3X89_18235 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F3X89_18250 PF00962 Adenosine/AMP deaminase F3X89_18255 PF01676 Metalloenzyme superfamily F3X89_18295 PF04972 BON domain F3X89_18295 PF13629 Pilus formation protein N terminal region F3X89_18295 PF00263 Bacterial type II and III secretion system protein F3X89_18310 PF00437 Type II/IV secretion system protein F3X89_18335 PF02789 Cytosol aminopeptidase family, N-terminal domain F3X89_18335 PF00883 Cytosol aminopeptidase family, catalytic domain F3X89_18345 PF00877 NlpC/P60 family F3X89_18345 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain F3X89_18355 PF01425 Amidase F3X89_18360 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_18360 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_18365 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_18370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18375 PF03466 LysR substrate binding domain F3X89_18380 PF03576 Peptidase family S58 F3X89_18390 PF00202 Aminotransferase class-III F3X89_18395 PF01292 Prokaryotic cytochrome b561 F3X89_18400 PF00551 Formyl transferase F3X89_18410 PF00150 Cellulase (glycosyl hydrolase family 5) F3X89_18420 PF02719 Polysaccharide biosynthesis protein F3X89_18435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_18435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_18440 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_18445 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_18450 PF01547 Bacterial extracellular solute-binding protein F3X89_18455 PF17912 MalK OB fold domain F3X89_18455 PF00005 ABC transporter F3X89_18460 PF14031 Putative serine dehydratase domain F3X89_18460 PF01168 Alanine racemase, N-terminal domain F3X89_18465 PF07364 Metallopeptidase family M81 F3X89_18465 PF07171 MlrC C-terminus F3X89_18480 PF01380 SIS domain F3X89_18480 PF01418 Helix-turn-helix domain, rpiR family F3X89_18485 PF00106 short chain dehydrogenase F3X89_18490 PF02838 Glycosyl hydrolase family 20, domain 2 F3X89_18490 PF00728 Glycosyl hydrolase family 20, catalytic domain F3X89_18515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3X89_18515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3X89_18515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3X89_18515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3X89_18530 PF00117 Glutamine amidotransferase class-I F3X89_18540 PF00679 Elongation factor G C-terminus F3X89_18540 PF03144 Elongation factor Tu domain 2 F3X89_18540 PF00009 Elongation factor Tu GTP binding domain F3X89_18540 PF06421 GTP-binding protein LepA C-terminus F3X89_18560 PF00850 Histone deacetylase domain F3X89_18565 PF00892 EamA-like transporter family F3X89_18585 PF12146 Serine aminopeptidase, S33 F3X89_18590 PF05198 Translation initiation factor IF-3, N-terminal domain F3X89_18590 PF00707 Translation initiation factor IF-3, C-terminal domain F3X89_18595 PF01632 Ribosomal protein L35 F3X89_18600 PF00453 Ribosomal protein L20 F3X89_18610 PF01409 tRNA synthetases class II core domain (F) F3X89_18610 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F3X89_18615 PF03484 tRNA synthetase B5 domain F3X89_18615 PF01588 Putative tRNA binding domain F3X89_18615 PF03483 B3/4 domain F3X89_18615 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F3X89_18615 PF03147 Ferredoxin-fold anticodon binding domain F3X89_18625 PF00912 Transglycosylase F3X89_18625 PF00905 Penicillin binding protein transpeptidase domain F3X89_18625 PF06832 Penicillin-Binding Protein C-terminus Family F3X89_18630 PF17962 Bacterial macroglobulin domain 6 F3X89_18630 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain F3X89_18630 PF01835 MG2 domain F3X89_18630 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain F3X89_18630 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain F3X89_18630 PF11974 Bacterial alpha-2-macroglobulin MG3 domain F3X89_18630 PF00207 Alpha-2-macroglobulin family F3X89_18630 PF07703 Alpha-2-macroglobulin bait region domain F3X89_18635 PF00248 Aldo/keto reductase family F3X89_18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18640 PF03466 LysR substrate binding domain F3X89_18655 PF00248 Aldo/keto reductase family F3X89_18660 PF01965 DJ-1/PfpI family F3X89_18660 PF12833 Helix-turn-helix domain F3X89_18670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_18670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_18695 PF13742 OB-fold nucleic acid binding domain F3X89_18695 PF02601 Exonuclease VII, large subunit F3X89_18700 PF02525 Flavodoxin-like fold F3X89_18705 PF02073 Thermophilic metalloprotease (M29) F3X89_18710 PF04073 Aminoacyl-tRNA editing domain F3X89_18725 PF03960 ArsC family F3X89_18740 PF07690 Major Facilitator Superfamily F3X89_18745 PF00107 Zinc-binding dehydrogenase F3X89_18745 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_18750 PF03466 LysR substrate binding domain F3X89_18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18755 PF00916 Sulfate permease family F3X89_18755 PF01740 STAS domain F3X89_18765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3X89_18765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3X89_18775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18775 PF03466 LysR substrate binding domain F3X89_18780 PF02525 Flavodoxin-like fold F3X89_18785 PF01638 HxlR-like helix-turn-helix F3X89_18790 PF00106 short chain dehydrogenase F3X89_18795 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_18795 PF00107 Zinc-binding dehydrogenase F3X89_18800 PF03167 Uracil DNA glycosylase superfamily F3X89_18810 PF00561 alpha/beta hydrolase fold F3X89_18815 PF03551 Transcriptional regulator PadR-like family F3X89_18815 PF13847 Methyltransferase domain F3X89_18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_18825 PF03466 LysR substrate binding domain F3X89_18845 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_18855 PF16859 Tetracyclin repressor-like, C-terminal domain F3X89_18855 PF00440 Bacterial regulatory proteins, tetR family F3X89_18860 PF00117 Glutamine amidotransferase class-I F3X89_18860 PF00958 GMP synthase C terminal domain F3X89_18905 PF01189 16S rRNA methyltransferase RsmB/F F3X89_18905 PF01029 NusB family F3X89_18910 PF03330 Lytic transglycolase F3X89_18920 PF08331 Domain of unknown function (DUF1730) F3X89_18925 PF13417 Glutathione S-transferase, N-terminal domain F3X89_18925 PF00043 Glutathione S-transferase, C-terminal domain F3X89_18930 PF02673 Bacitracin resistance protein BacA F3X89_18950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3X89_18960 PF13649 Methyltransferase domain F3X89_18965 PF02768 DNA polymerase III beta subunit, C-terminal domain F3X89_18965 PF00712 DNA polymerase III beta subunit, N-terminal domain F3X89_18965 PF02767 DNA polymerase III beta subunit, central domain F3X89_18970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_18975 PF02021 Uncharacterised protein family UPF0102 F3X89_18990 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F3X89_18990 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F3X89_19000 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_19005 PF01810 LysE type translocator F3X89_19010 PF00857 Isochorismatase family F3X89_19015 PF01810 LysE type translocator F3X89_19035 PF01037 Lrp/AsnC ligand binding domain F3X89_19045 PF00692 dUTPase F3X89_19050 PF16658 Class II release factor RF3, C-terminal domain F3X89_19050 PF00009 Elongation factor Tu GTP binding domain F3X89_19050 PF03144 Elongation factor Tu domain 2 F3X89_19075 PF00248 Aldo/keto reductase family F3X89_19080 PF03466 LysR substrate binding domain F3X89_19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19085 PF01980 tRNA-methyltransferase O F3X89_19090 PF03459 TOBE domain F3X89_19095 PF12411 Choline sulfatase enzyme C terminal F3X89_19095 PF00884 Sulfatase F3X89_19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19100 PF03466 LysR substrate binding domain F3X89_19105 PF00982 Glycosyltransferase family 20 F3X89_19110 PF02358 Trehalose-phosphatase F3X89_19120 PF04127 DNA / pantothenate metabolism flavoprotein F3X89_19120 PF02441 Flavoprotein F3X89_19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19135 PF03466 LysR substrate binding domain F3X89_19140 PF03466 LysR substrate binding domain F3X89_19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19145 PF07690 Major Facilitator Superfamily F3X89_19150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3X89_19155 PF01850 PIN domain F3X89_19160 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin F3X89_19170 PF01175 Urocanase Rossmann-like domain F3X89_19170 PF17391 Urocanase N-terminal domain F3X89_19170 PF17392 Urocanase C-terminal domain F3X89_19185 PF01546 Peptidase family M20/M25/M40 F3X89_19190 PF01979 Amidohydrolase family F3X89_19195 PF00221 Aromatic amino acid lyase F3X89_19205 PF03109 ABC1 family F3X89_19210 PF01209 ubiE/COQ5 methyltransferase family F3X89_19215 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F3X89_19215 PF06827 Zinc finger found in FPG and IleRS F3X89_19215 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F3X89_19220 PF00378 Enoyl-CoA hydratase/isomerase F3X89_19225 PF01649 Ribosomal protein S20 F3X89_19230 PF00376 MerR family regulatory protein F3X89_19230 PF13614 AAA domain F3X89_19235 PF02195 ParB-like nuclease domain F3X89_19235 PF07506 RepB plasmid partitioning protein F3X89_19240 PF11800 Replication protein C C-terminal region F3X89_19240 PF03428 Replication protein C N-terminal domain F3X89_19255 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19260 PF00005 ABC transporter F3X89_19265 PF03466 LysR substrate binding domain F3X89_19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19270 PF00561 alpha/beta hydrolase fold F3X89_19290 PF03275 UDP-galactopyranose mutase F3X89_19295 PF01970 Tripartite tricarboxylate transporter TctA family F3X89_19305 PF03401 Tripartite tricarboxylate transporter family receptor F3X89_19315 PF00072 Response regulator receiver domain F3X89_19315 PF00486 Transcriptional regulatory protein, C terminal F3X89_19320 PF00512 His Kinase A (phospho-acceptor) domain F3X89_19320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_19325 PF00171 Aldehyde dehydrogenase family F3X89_19330 PF01266 FAD dependent oxidoreductase F3X89_19335 PF03466 LysR substrate binding domain F3X89_19335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19340 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19345 PF00005 ABC transporter F3X89_19355 PF00561 alpha/beta hydrolase fold F3X89_19380 PF00905 Penicillin binding protein transpeptidase domain F3X89_19380 PF03717 Penicillin-binding Protein dimerisation domain F3X89_19385 PF00158 Sigma-54 interaction domain F3X89_19385 PF02954 Bacterial regulatory protein, Fis family F3X89_19385 PF13426 PAS domain F3X89_19390 PF00171 Aldehyde dehydrogenase family F3X89_19400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_19400 PF00672 HAMP domain F3X89_19415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3X89_19420 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F3X89_19420 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F3X89_19425 PF02371 Transposase IS116/IS110/IS902 family F3X89_19425 PF01548 Transposase F3X89_19430 PF05199 GMC oxidoreductase F3X89_19430 PF00732 GMC oxidoreductase F3X89_19435 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19440 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19450 PF01266 FAD dependent oxidoreductase F3X89_19460 PF08402 TOBE domain F3X89_19460 PF00005 ABC transporter F3X89_19465 PF03466 LysR substrate binding domain F3X89_19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19470 PF00005 ABC transporter F3X89_19475 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19480 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19495 PF00248 Aldo/keto reductase family F3X89_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19500 PF03466 LysR substrate binding domain F3X89_19505 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_19505 PF01571 Aminomethyltransferase folate-binding domain F3X89_19515 PF01613 Flavin reductase like domain F3X89_19520 PF12146 Serine aminopeptidase, S33 F3X89_19525 PF01042 Endoribonuclease L-PSP F3X89_19530 PF00857 Isochorismatase family F3X89_19535 PF00296 Luciferase-like monooxygenase F3X89_19540 PF00005 ABC transporter F3X89_19540 PF00664 ABC transporter transmembrane region F3X89_19545 PF00563 EAL domain F3X89_19545 PF00990 Diguanylate cyclase, GGDEF domain F3X89_19545 PF03707 Bacterial signalling protein N terminal repeat F3X89_19550 PF00106 short chain dehydrogenase F3X89_19560 PF00480 ROK family F3X89_19565 PF01261 Xylose isomerase-like TIM barrel F3X89_19570 PF12833 Helix-turn-helix domain F3X89_19570 PF02311 AraC-like ligand binding domain F3X89_19580 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19585 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19595 PF00107 Zinc-binding dehydrogenase F3X89_19595 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_19600 PF03459 TOBE domain F3X89_19600 PF17912 MalK OB fold domain F3X89_19600 PF00005 ABC transporter F3X89_19610 PF01063 Amino-transferase class IV F3X89_19615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_19625 PF06418 CTP synthase N-terminus F3X89_19625 PF00117 Glutamine amidotransferase class-I F3X89_19630 PF00557 Metallopeptidase family M24 F3X89_19630 PF01321 Creatinase/Prolidase N-terminal domain F3X89_19635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3X89_19635 PF13378 Enolase C-terminal domain-like F3X89_19640 PF01546 Peptidase family M20/M25/M40 F3X89_19640 PF07687 Peptidase dimerisation domain F3X89_19645 PF00005 ABC transporter F3X89_19650 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19655 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_19660 PF00392 Bacterial regulatory proteins, gntR family F3X89_19660 PF07729 FCD domain F3X89_19665 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19670 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19675 PF00005 ABC transporter F3X89_19675 PF08402 TOBE domain F3X89_19685 PF14226 non-haem dioxygenase in morphine synthesis N-terminal F3X89_19685 PF03171 2OG-Fe(II) oxygenase superfamily F3X89_19690 PF00378 Enoyl-CoA hydratase/isomerase F3X89_19700 PF01565 FAD binding domain F3X89_19700 PF02913 FAD linked oxidases, C-terminal domain F3X89_19705 PF00392 Bacterial regulatory proteins, gntR family F3X89_19705 PF07729 FCD domain F3X89_19710 PF00107 Zinc-binding dehydrogenase F3X89_19715 PF00005 ABC transporter F3X89_19715 PF00664 ABC transporter transmembrane region F3X89_19720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_19720 PF00529 HlyD membrane-fusion protein of T1SS F3X89_19745 PF07729 FCD domain F3X89_19745 PF00392 Bacterial regulatory proteins, gntR family F3X89_19750 PF00701 Dihydrodipicolinate synthetase family F3X89_19755 PF01266 FAD dependent oxidoreductase F3X89_19760 PF04324 BFD-like [2Fe-2S] binding domain F3X89_19760 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_19775 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19780 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19785 PF00005 ABC transporter F3X89_19800 PF00005 ABC transporter F3X89_19800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_19805 PF00005 ABC transporter F3X89_19805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_19810 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19810 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_19815 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_19825 PF07883 Cupin domain F3X89_19825 PF05899 Protein of unknown function (DUF861) F3X89_19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19830 PF03466 LysR substrate binding domain F3X89_19845 PF00857 Isochorismatase family F3X89_19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19850 PF03466 LysR substrate binding domain F3X89_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_19855 PF03466 LysR substrate binding domain F3X89_19860 PF13533 Biotin-lipoyl like F3X89_19865 PF07690 Major Facilitator Superfamily F3X89_19875 PF00892 EamA-like transporter family F3X89_19880 PF07729 FCD domain F3X89_19880 PF00392 Bacterial regulatory proteins, gntR family F3X89_19890 PF01266 FAD dependent oxidoreductase F3X89_19895 PF13458 Periplasmic binding protein F3X89_19910 PF00005 ABC transporter F3X89_19910 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_19915 PF00005 ABC transporter F3X89_19925 PF00392 Bacterial regulatory proteins, gntR family F3X89_19925 PF07729 FCD domain F3X89_19940 PF00005 ABC transporter F3X89_19945 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19950 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19960 PF00296 Luciferase-like monooxygenase F3X89_19975 PF00196 Bacterial regulatory proteins, luxR family F3X89_19975 PF00072 Response regulator receiver domain F3X89_19980 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19985 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_19985 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_19990 PF00005 ABC transporter F3X89_19990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_20005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_20025 PF01244 Membrane dipeptidase (Peptidase family M19) F3X89_20030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_20030 PF00072 Response regulator receiver domain F3X89_20030 PF13426 PAS domain F3X89_20035 PF00072 Response regulator receiver domain F3X89_20035 PF00196 Bacterial regulatory proteins, luxR family F3X89_20040 PF05532 CsbD-like F3X89_20050 PF13581 Histidine kinase-like ATPase domain F3X89_20050 PF07536 HWE histidine kinase F3X89_20050 PF13426 PAS domain F3X89_20065 PF01381 Helix-turn-helix F3X89_20075 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20080 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20085 PF00005 ABC transporter F3X89_20090 PF01063 Amino-transferase class IV F3X89_20100 PF02653 Branched-chain amino acid transport system / permease component F3X89_20105 PF02653 Branched-chain amino acid transport system / permease component F3X89_20110 PF00005 ABC transporter F3X89_20115 PF01425 Amidase F3X89_20125 PF11818 C-terminal domain of tail specific protease (DUF3340) F3X89_20125 PF00595 PDZ domain F3X89_20125 PF03572 Peptidase family S41 F3X89_20125 PF17804 Tail specific protease N-terminal domain F3X89_20140 PF03737 Aldolase/RraA F3X89_20145 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20150 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20155 PF08402 TOBE domain F3X89_20155 PF00005 ABC transporter F3X89_20165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_20170 PF03466 LysR substrate binding domain F3X89_20170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20175 PF02633 Creatinine amidohydrolase F3X89_20180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_20180 PF00005 ABC transporter F3X89_20185 PF00005 ABC transporter F3X89_20185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_20190 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20220 PF03466 LysR substrate binding domain F3X89_20225 PF01810 LysE type translocator F3X89_20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20230 PF03466 LysR substrate binding domain F3X89_20235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3X89_20250 PF02525 Flavodoxin-like fold F3X89_20255 PF00999 Sodium/hydrogen exchanger family F3X89_20270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_20270 PF00529 HlyD membrane-fusion protein of T1SS F3X89_20275 PF00873 AcrB/AcrD/AcrF family F3X89_20280 PF00486 Transcriptional regulatory protein, C terminal F3X89_20280 PF00072 Response regulator receiver domain F3X89_20285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_20285 PF00512 His Kinase A (phospho-acceptor) domain F3X89_20285 PF00672 HAMP domain F3X89_20290 PF02581 Thiamine monophosphate synthase F3X89_20295 PF05690 Thiazole biosynthesis protein ThiG F3X89_20305 PF01266 FAD dependent oxidoreductase F3X89_20310 PF01964 Radical SAM ThiC family F3X89_20310 PF13667 ThiC-associated domain F3X89_20315 PF00356 Bacterial regulatory proteins, lacI family F3X89_20325 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_20330 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20335 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20340 PF00005 ABC transporter F3X89_20345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_20345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_20355 PF03466 LysR substrate binding domain F3X89_20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20370 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20375 PF00005 ABC transporter F3X89_20380 PF01266 FAD dependent oxidoreductase F3X89_20385 PF01037 Lrp/AsnC ligand binding domain F3X89_20390 PF03435 Saccharopine dehydrogenase NADP binding domain F3X89_20390 PF16653 Saccharopine dehydrogenase C-terminal domain F3X89_20395 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_20400 PF00248 Aldo/keto reductase family F3X89_20405 PF07690 Major Facilitator Superfamily F3X89_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20415 PF03466 LysR substrate binding domain F3X89_20425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain F3X89_20425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase F3X89_20430 PF03450 CO dehydrogenase flavoprotein C-terminal domain F3X89_20430 PF00941 FAD binding domain in molybdopterin dehydrogenase F3X89_20435 PF01799 [2Fe-2S] binding domain F3X89_20435 PF10518 TAT (twin-arginine translocation) pathway signal sequence F3X89_20435 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_20440 PF07690 Major Facilitator Superfamily F3X89_20445 PF13545 Crp-like helix-turn-helix domain F3X89_20445 PF00027 Cyclic nucleotide-binding domain F3X89_20460 PF00083 Sugar (and other) transporter F3X89_20480 PF13508 Acetyltransferase (GNAT) domain F3X89_20485 PF01546 Peptidase family M20/M25/M40 F3X89_20485 PF07687 Peptidase dimerisation domain F3X89_20490 PF00005 ABC transporter F3X89_20490 PF03412 Peptidase C39 family F3X89_20490 PF00664 ABC transporter transmembrane region F3X89_20495 PF13533 Biotin-lipoyl like F3X89_20505 PF02502 Ribose/Galactose Isomerase F3X89_20510 PF00121 Triosephosphate isomerase F3X89_20515 PF08220 DeoR-like helix-turn-helix domain F3X89_20515 PF00455 DeoR C terminal sensor domain F3X89_20520 PF04198 Putative sugar-binding domain F3X89_20525 PF01261 Xylose isomerase-like TIM barrel F3X89_20530 PF01266 FAD dependent oxidoreductase F3X89_20530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3X89_20535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_20535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_20545 PF00005 ABC transporter F3X89_20550 PF02653 Branched-chain amino acid transport system / permease component F3X89_20555 PF13407 Periplasmic binding protein domain F3X89_20560 PF08220 DeoR-like helix-turn-helix domain F3X89_20560 PF05573 NosL F3X89_20565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_20565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_20570 PF01266 FAD dependent oxidoreductase F3X89_20570 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3X89_20575 PF01116 Fructose-bisphosphate aldolase class-II F3X89_20580 PF00364 Biotin-requiring enzyme F3X89_20585 PF00289 Biotin carboxylase, N-terminal domain F3X89_20585 PF02785 Biotin carboxylase C-terminal domain F3X89_20585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_20595 PF02682 Carboxyltransferase domain, subdomain C and D F3X89_20600 PF02626 Carboxyltransferase domain, subdomain A and B F3X89_20605 PF03746 LamB/YcsF family F3X89_20610 PF00155 Aminotransferase class I and II F3X89_20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20615 PF03466 LysR substrate binding domain F3X89_20620 PF00106 short chain dehydrogenase F3X89_20625 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20630 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20635 PF00005 ABC transporter F3X89_20645 PF03737 Aldolase/RraA F3X89_20650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20650 PF03466 LysR substrate binding domain F3X89_20655 PF03746 LamB/YcsF family F3X89_20665 PF02785 Biotin carboxylase C-terminal domain F3X89_20665 PF00289 Biotin carboxylase, N-terminal domain F3X89_20665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_20685 PF08402 TOBE domain F3X89_20685 PF00005 ABC transporter F3X89_20690 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20715 PF08402 TOBE domain F3X89_20715 PF00005 ABC transporter F3X89_20720 PF01522 Polysaccharide deacetylase F3X89_20730 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3X89_20730 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3X89_20740 PF01425 Amidase F3X89_20745 PF17874 MalT-like TPR region F3X89_20745 PF00196 Bacterial regulatory proteins, luxR family F3X89_20755 PF05378 Hydantoinase/oxoprolinase N-terminal region F3X89_20755 PF01968 Hydantoinase/oxoprolinase F3X89_20760 PF00005 ABC transporter F3X89_20760 PF08402 TOBE domain F3X89_20770 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20775 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_20780 PF00005 ABC transporter F3X89_20785 PF02653 Branched-chain amino acid transport system / permease component F3X89_20790 PF13407 Periplasmic binding protein domain F3X89_20800 PF02733 Dak1 domain F3X89_20805 PF02734 DAK2 domain F3X89_20810 PF02733 Dak1 domain F3X89_20815 PF02734 DAK2 domain F3X89_20835 PF06719 AraC-type transcriptional regulator N-terminus F3X89_20835 PF12833 Helix-turn-helix domain F3X89_20850 PF00857 Isochorismatase family F3X89_20865 PF03466 LysR substrate binding domain F3X89_20865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_20870 PF00072 Response regulator receiver domain F3X89_20870 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_20920 PF03552 Cellulose synthase F3X89_20920 PF07238 PilZ domain F3X89_20920 PF00535 Glycosyl transferase family 2 F3X89_20935 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_20935 PF00107 Zinc-binding dehydrogenase F3X89_20940 PF00171 Aldehyde dehydrogenase family F3X89_20945 PF09363 XFP C-terminal domain F3X89_20945 PF09364 XFP N-terminal domain F3X89_20945 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase F3X89_20950 PF00871 Acetokinase family F3X89_20965 PF00486 Transcriptional regulatory protein, C terminal F3X89_20965 PF00072 Response regulator receiver domain F3X89_20970 PF00027 Cyclic nucleotide-binding domain F3X89_20970 PF13545 Crp-like helix-turn-helix domain F3X89_20975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_20975 PF13426 PAS domain F3X89_20975 PF00072 Response regulator receiver domain F3X89_20980 PF08173 Membrane bound YbgT-like protein F3X89_20985 PF02322 Cytochrome bd terminal oxidase subunit II F3X89_20990 PF01654 Cytochrome bd terminal oxidase subunit I F3X89_20995 PF00005 ABC transporter F3X89_20995 PF00664 ABC transporter transmembrane region F3X89_21000 PF00664 ABC transporter transmembrane region F3X89_21000 PF00005 ABC transporter F3X89_21010 PF00571 CBS domain F3X89_21010 PF00478 IMP dehydrogenase / GMP reductase domain F3X89_21020 PF00571 CBS domain F3X89_21030 PF00403 Heavy-metal-associated domain F3X89_21045 PF14490 Helix-hairpin-helix containing domain F3X89_21045 PF13538 UvrD-like helicase C-terminal domain F3X89_21045 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain F3X89_21050 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F3X89_21055 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F3X89_21095 PF07228 Stage II sporulation protein E (SpoIIE) F3X89_21095 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain F3X89_21100 PF01209 ubiE/COQ5 methyltransferase family F3X89_21110 PF00563 EAL domain F3X89_21110 PF03707 Bacterial signalling protein N terminal repeat F3X89_21110 PF00990 Diguanylate cyclase, GGDEF domain F3X89_21110 PF13188 PAS domain F3X89_21115 PF07495 Y_Y_Y domain F3X89_21115 PF00072 Response regulator receiver domain F3X89_21115 PF07494 Two component regulator propeller F3X89_21115 PF12833 Helix-turn-helix domain F3X89_21115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_21115 PF00512 His Kinase A (phospho-acceptor) domain F3X89_21120 PF16363 GDP-mannose 4,6 dehydratase F3X89_21125 PF16363 GDP-mannose 4,6 dehydratase F3X89_21135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3X89_21135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3X89_21135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3X89_21180 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) F3X89_21180 PF00722 Glycosyl hydrolases family 16 F3X89_21195 PF00535 Glycosyl transferase family 2 F3X89_21200 PF02397 Bacterial sugar transferase F3X89_21205 PF00196 Bacterial regulatory proteins, luxR family F3X89_21205 PF00072 Response regulator receiver domain F3X89_21210 PF05175 Methyltransferase small domain F3X89_21215 PF13537 Glutamine amidotransferase domain F3X89_21215 PF00733 Asparagine synthase F3X89_21225 PF13193 AMP-binding enzyme C-terminal domain F3X89_21225 PF00501 AMP-binding enzyme F3X89_21230 PF02540 NAD synthase F3X89_21235 PF14765 Polyketide synthase dehydratase F3X89_21235 PF00550 Phosphopantetheine attachment site F3X89_21235 PF08242 Methyltransferase domain F3X89_21235 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_21235 PF00975 Thioesterase domain F3X89_21235 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_21235 PF16197 Ketoacyl-synthetase C-terminal extension F3X89_21245 PF13188 PAS domain F3X89_21245 PF00990 Diguanylate cyclase, GGDEF domain F3X89_21245 PF00563 EAL domain F3X89_21245 PF03707 Bacterial signalling protein N terminal repeat F3X89_21255 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase F3X89_21270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_21275 PF00296 Luciferase-like monooxygenase F3X89_21280 PF09084 NMT1/THI5 like F3X89_21285 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21290 PF00005 ABC transporter F3X89_21295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_21295 PF00512 His Kinase A (phospho-acceptor) domain F3X89_21300 PF02954 Bacterial regulatory protein, Fis family F3X89_21300 PF00072 Response regulator receiver domain F3X89_21300 PF00158 Sigma-54 interaction domain F3X89_21305 PF00356 Bacterial regulatory proteins, lacI family F3X89_21310 PF07690 Major Facilitator Superfamily F3X89_21315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_21315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_21315 PF01842 ACT domain F3X89_21320 PF00701 Dihydrodipicolinate synthetase family F3X89_21325 PF01370 NAD dependent epimerase/dehydratase family F3X89_21340 PF05161 MOFRL family F3X89_21340 PF13660 Domain of unknown function (DUF4147) F3X89_21345 PF00180 Isocitrate/isopropylmalate dehydrogenase F3X89_21350 PF07690 Major Facilitator Superfamily F3X89_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_21355 PF03466 LysR substrate binding domain F3X89_21370 PF00593 TonB dependent receptor F3X89_21370 PF07715 TonB-dependent Receptor Plug Domain F3X89_21375 PF07690 Major Facilitator Superfamily F3X89_21390 PF07687 Peptidase dimerisation domain F3X89_21390 PF01546 Peptidase family M20/M25/M40 F3X89_21395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21400 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21405 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_21405 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21410 PF00005 ABC transporter F3X89_21410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21415 PF00296 Luciferase-like monooxygenase F3X89_21430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_21435 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_21435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_21445 PF00296 Luciferase-like monooxygenase F3X89_21450 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21455 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_21455 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21460 PF00005 ABC transporter F3X89_21460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21465 PF00005 ABC transporter F3X89_21470 PF00248 Aldo/keto reductase family F3X89_21490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_21495 PF03466 LysR substrate binding domain F3X89_21500 PF00881 Nitroreductase family F3X89_21505 PF00296 Luciferase-like monooxygenase F3X89_21510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_21510 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_21510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_21520 PF00296 Luciferase-like monooxygenase F3X89_21525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_21525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_21530 PF00005 ABC transporter F3X89_21535 PF09084 NMT1/THI5 like F3X89_21540 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21545 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21550 PF00296 Luciferase-like monooxygenase F3X89_21555 PF00583 Acetyltransferase (GNAT) family F3X89_21560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21570 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21575 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21575 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_21580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21580 PF00005 ABC transporter F3X89_21585 PF00296 Luciferase-like monooxygenase F3X89_21590 PF00296 Luciferase-like monooxygenase F3X89_21615 PF01571 Aminomethyltransferase folate-binding domain F3X89_21615 PF16350 FAD dependent oxidoreductase central domain F3X89_21615 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3X89_21615 PF01266 FAD dependent oxidoreductase F3X89_21625 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21630 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21635 PF00005 ABC transporter F3X89_21635 PF17912 MalK OB fold domain F3X89_21640 PF01547 Bacterial extracellular solute-binding protein F3X89_21645 PF00392 Bacterial regulatory proteins, gntR family F3X89_21645 PF07702 UTRA domain F3X89_21650 PF01183 Glycosyl hydrolases family 25 F3X89_21655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3X89_21655 PF13378 Enolase C-terminal domain-like F3X89_21660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21660 PF00005 ABC transporter F3X89_21665 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_21665 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21670 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21680 PF07729 FCD domain F3X89_21680 PF00392 Bacterial regulatory proteins, gntR family F3X89_21685 PF00701 Dihydrodipicolinate synthetase family F3X89_21690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_21695 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21700 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_21700 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_21705 PF00005 ABC transporter F3X89_21705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_21710 PF00005 ABC transporter F3X89_21715 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH F3X89_21725 PF00459 Inositol monophosphatase family F3X89_21730 PF03009 Glycerophosphoryl diester phosphodiesterase family F3X89_21735 PF00480 ROK family F3X89_21735 PF01325 Iron dependent repressor, N-terminal DNA binding domain F3X89_21740 PF00990 Diguanylate cyclase, GGDEF domain F3X89_21740 PF00563 EAL domain F3X89_21740 PF13188 PAS domain F3X89_21740 PF03707 Bacterial signalling protein N terminal repeat F3X89_21755 PF01209 ubiE/COQ5 methyltransferase family F3X89_21760 PF07007 Lysozyme inhibitor LprI F3X89_21775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_21775 PF00672 HAMP domain F3X89_21780 PF02653 Branched-chain amino acid transport system / permease component F3X89_21785 PF02653 Branched-chain amino acid transport system / permease component F3X89_21790 PF00005 ABC transporter F3X89_21805 PF00083 Sugar (and other) transporter F3X89_21805 PF07690 Major Facilitator Superfamily F3X89_21810 PF17938 Tetracyclin repressor-like, C-terminal domain F3X89_21810 PF00440 Bacterial regulatory proteins, tetR family F3X89_21815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3X89_21815 PF08501 Shikimate dehydrogenase substrate binding domain F3X89_21835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3X89_21845 PF13737 Transposase DDE domain F3X89_21855 PF01381 Helix-turn-helix F3X89_21865 PF00929 Exonuclease F3X89_21870 PF13635 Domain of unknown function (DUF4143) F3X89_21870 PF13173 AAA domain F3X89_21890 PF12728 Helix-turn-helix domain F3X89_21890 PF02661 Fic/DOC family F3X89_21900 PF01850 PIN domain F3X89_21920 PF13676 TIR domain F3X89_22020 PF03050 Transposase IS66 family F3X89_22025 PF13610 DDE domain F3X89_22045 PF02615 Malate/L-lactate dehydrogenase F3X89_22055 PF00392 Bacterial regulatory proteins, gntR family F3X89_22055 PF07729 FCD domain F3X89_22060 PF05544 Proline racemase F3X89_22080 PF00005 ABC transporter F3X89_22095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_22095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_22100 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22105 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22115 PF01547 Bacterial extracellular solute-binding protein F3X89_22120 PF00857 Isochorismatase family F3X89_22130 PF01979 Amidohydrolase family F3X89_22145 PF02608 ABC transporter substrate-binding protein PnrA-like F3X89_22150 PF00005 ABC transporter F3X89_22160 PF02653 Branched-chain amino acid transport system / permease component F3X89_22165 PF01156 Inosine-uridine preferring nucleoside hydrolase F3X89_22170 PF01156 Inosine-uridine preferring nucleoside hydrolase F3X89_22180 PF03466 LysR substrate binding domain F3X89_22180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22195 PF01527 Transposase F3X89_22200 PF05717 IS66 Orf2 like protein F3X89_22210 PF00589 Phage integrase family F3X89_22210 PF02899 Phage integrase, N-terminal SAM-like domain F3X89_22215 PF00589 Phage integrase family F3X89_22220 PF00589 Phage integrase family F3X89_22220 PF02899 Phage integrase, N-terminal SAM-like domain F3X89_22235 PF00465 Iron-containing alcohol dehydrogenase F3X89_22260 PF03466 LysR substrate binding domain F3X89_22260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22275 PF01209 ubiE/COQ5 methyltransferase family F3X89_22310 PF00589 Phage integrase family F3X89_22310 PF02899 Phage integrase, N-terminal SAM-like domain F3X89_22350 PF00664 ABC transporter transmembrane region F3X89_22350 PF00005 ABC transporter F3X89_22350 PF04954 Siderophore-interacting protein F3X89_22350 PF08021 Siderophore-interacting FAD-binding domain F3X89_22360 PF00593 TonB dependent receptor F3X89_22360 PF07715 TonB-dependent Receptor Plug Domain F3X89_22365 PF00440 Bacterial regulatory proteins, tetR family F3X89_22370 PF00668 Condensation domain F3X89_22370 PF00550 Phosphopantetheine attachment site F3X89_22370 PF00668 Condensation domain F3X89_22370 PF00501 AMP-binding enzyme F3X89_22370 PF13193 AMP-binding enzyme C-terminal domain F3X89_22370 PF13193 AMP-binding enzyme C-terminal domain F3X89_22370 PF00501 AMP-binding enzyme F3X89_22370 PF07993 Male sterility protein F3X89_22370 PF07993 Male sterility protein F3X89_22370 PF00550 Phosphopantetheine attachment site F3X89_22375 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3X89_22375 PF01276 Orn/Lys/Arg decarboxylase, major domain F3X89_22380 PF00501 AMP-binding enzyme F3X89_22380 PF00550 Phosphopantetheine attachment site F3X89_22380 PF00668 Condensation domain F3X89_22380 PF13193 AMP-binding enzyme C-terminal domain F3X89_22385 PF00501 AMP-binding enzyme F3X89_22385 PF00975 Thioesterase domain F3X89_22385 PF00550 Phosphopantetheine attachment site F3X89_22385 PF13193 AMP-binding enzyme C-terminal domain F3X89_22385 PF00391 PEP-utilising enzyme, mobile domain F3X89_22385 PF00668 Condensation domain F3X89_22385 PF08241 Methyltransferase domain F3X89_22390 PF00550 Phosphopantetheine attachment site F3X89_22390 PF00668 Condensation domain F3X89_22390 PF13193 AMP-binding enzyme C-terminal domain F3X89_22390 PF00501 AMP-binding enzyme F3X89_22390 PF00975 Thioesterase domain F3X89_22395 PF00550 Phosphopantetheine attachment site F3X89_22395 PF00668 Condensation domain F3X89_22395 PF00975 Thioesterase domain F3X89_22395 PF13193 AMP-binding enzyme C-terminal domain F3X89_22395 PF00501 AMP-binding enzyme F3X89_22400 PF00425 chorismate binding enzyme F3X89_22405 PF13193 AMP-binding enzyme C-terminal domain F3X89_22405 PF00501 AMP-binding enzyme F3X89_22410 PF12697 Alpha/beta hydrolase family F3X89_22415 PF00425 chorismate binding enzyme F3X89_22420 PF03621 MbtH-like protein F3X89_22425 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) F3X89_22455 PF01425 Amidase F3X89_22465 PF00857 Isochorismatase family F3X89_22470 PF00005 ABC transporter F3X89_22475 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) F3X89_22480 PF00857 Isochorismatase family F3X89_22485 PF02653 Branched-chain amino acid transport system / permease component F3X89_22495 PF02608 ABC transporter substrate-binding protein PnrA-like F3X89_22500 PF00392 Bacterial regulatory proteins, gntR family F3X89_22500 PF07729 FCD domain F3X89_22505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22505 PF03466 LysR substrate binding domain F3X89_22520 PF07690 Major Facilitator Superfamily F3X89_22525 PF00248 Aldo/keto reductase family F3X89_22530 PF00248 Aldo/keto reductase family F3X89_22535 PF07690 Major Facilitator Superfamily F3X89_22540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22540 PF03466 LysR substrate binding domain F3X89_22550 PF13673 Acetyltransferase (GNAT) domain F3X89_22555 PF12146 Serine aminopeptidase, S33 F3X89_22595 PF09308 LuxQ, periplasmic F3X89_22595 PF00072 Response regulator receiver domain F3X89_22595 PF00512 His Kinase A (phospho-acceptor) domain F3X89_22595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_22605 PF01432 Peptidase family M3 F3X89_22640 PF00005 ABC transporter F3X89_22640 PF03412 Peptidase C39 family F3X89_22640 PF00664 ABC transporter transmembrane region F3X89_22650 PF01381 Helix-turn-helix F3X89_22690 PF13610 DDE domain F3X89_22715 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F3X89_22735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_22735 PF00005 ABC transporter F3X89_22740 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_22740 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22745 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_22755 PF01380 SIS domain F3X89_22755 PF01418 Helix-turn-helix domain, rpiR family F3X89_22765 PF01266 FAD dependent oxidoreductase F3X89_22770 PF00171 Aldehyde dehydrogenase family F3X89_22775 PF09084 NMT1/THI5 like F3X89_22780 PF00005 ABC transporter F3X89_22785 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22790 PF00890 FAD binding domain F3X89_22790 PF14537 Cytochrome c3 F3X89_22795 PF02515 CoA-transferase family III F3X89_22800 PF00378 Enoyl-CoA hydratase/isomerase F3X89_22805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22805 PF03466 LysR substrate binding domain F3X89_22810 PF00037 4Fe-4S binding domain F3X89_22820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22820 PF03466 LysR substrate binding domain F3X89_22825 PF13416 Bacterial extracellular solute-binding protein F3X89_22830 PF08402 TOBE domain F3X89_22830 PF00005 ABC transporter F3X89_22835 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22840 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_22845 PF13454 FAD-NAD(P)-binding F3X89_22850 PF02633 Creatinine amidohydrolase F3X89_22865 PF01979 Amidohydrolase family F3X89_22870 PF00155 Aminotransferase class I and II F3X89_22880 PF03466 LysR substrate binding domain F3X89_22880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22885 PF00296 Luciferase-like monooxygenase F3X89_22900 PF01548 Transposase F3X89_22900 PF02371 Transposase IS116/IS110/IS902 family F3X89_22920 PF01047 MarR family F3X89_22940 PF13188 PAS domain F3X89_22940 PF00563 EAL domain F3X89_22940 PF00990 Diguanylate cyclase, GGDEF domain F3X89_22940 PF03707 Bacterial signalling protein N terminal repeat F3X89_22950 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3X89_22950 PF14579 Helix-hairpin-helix motif F3X89_22950 PF02811 PHP domain F3X89_22950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3X89_22965 PF03466 LysR substrate binding domain F3X89_22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_22975 PF00456 Transketolase, thiamine diphosphate binding domain F3X89_22980 PF02780 Transketolase, C-terminal domain F3X89_22980 PF02779 Transketolase, pyrimidine binding domain F3X89_22985 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F3X89_22985 PF03480 Bacterial extracellular solute-binding protein, family 7 F3X89_22990 PF03480 Bacterial extracellular solute-binding protein, family 7 F3X89_22990 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F3X89_22995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F3X89_23000 PF00005 ABC transporter F3X89_23005 PF02653 Branched-chain amino acid transport system / permease component F3X89_23010 PF13407 Periplasmic binding protein domain F3X89_23015 PF04909 Amidohydrolase F3X89_23020 PF00753 Metallo-beta-lactamase superfamily F3X89_23020 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3X89_23025 PF02525 Flavodoxin-like fold F3X89_23030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_23030 PF03466 LysR substrate binding domain F3X89_23045 PF12697 Alpha/beta hydrolase family F3X89_23060 PF00171 Aldehyde dehydrogenase family F3X89_23070 PF02653 Branched-chain amino acid transport system / permease component F3X89_23070 PF11862 Domain of unknown function (DUF3382) F3X89_23075 PF02653 Branched-chain amino acid transport system / permease component F3X89_23080 PF00005 ABC transporter F3X89_23085 PF00005 ABC transporter F3X89_23085 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_23095 PF00171 Aldehyde dehydrogenase family F3X89_23105 PF13380 CoA binding domain F3X89_23105 PF13607 Succinyl-CoA ligase like flavodoxin domain F3X89_23110 PF00378 Enoyl-CoA hydratase/isomerase F3X89_23125 PF02661 Fic/DOC family F3X89_23125 PF17841 BID domain of Bartonella effector protein (Bep) F3X89_23175 PF01527 Transposase F3X89_23205 PF00510 Cytochrome c oxidase subunit III F3X89_23210 PF00510 Cytochrome c oxidase subunit III F3X89_23215 PF00115 Cytochrome C and Quinol oxidase polypeptide I F3X89_23220 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3X89_23225 PF00034 Cytochrome c F3X89_23240 PF01022 Bacterial regulatory protein, arsR family F3X89_23255 PF00106 short chain dehydrogenase F3X89_23260 PF00440 Bacterial regulatory proteins, tetR family F3X89_23270 PF01872 RibD C-terminal domain F3X89_23275 PF02909 Tetracyclin repressor-like, C-terminal domain F3X89_23275 PF00440 Bacterial regulatory proteins, tetR family F3X89_23290 PF01979 Amidohydrolase family F3X89_23295 PF08220 DeoR-like helix-turn-helix domain F3X89_23295 PF00455 DeoR C terminal sensor domain F3X89_23300 PF00106 short chain dehydrogenase F3X89_23310 PF13454 FAD-NAD(P)-binding F3X89_23320 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23325 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23330 PF17912 MalK OB fold domain F3X89_23330 PF00005 ABC transporter F3X89_23335 PF00857 Isochorismatase family F3X89_23345 PF01425 Amidase F3X89_23350 PF03437 BtpA family F3X89_23355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_23355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_23360 PF13426 PAS domain F3X89_23360 PF08447 PAS fold F3X89_23360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_23375 PF01156 Inosine-uridine preferring nucleoside hydrolase F3X89_23380 PF01048 Phosphorylase superfamily F3X89_23385 PF09084 NMT1/THI5 like F3X89_23390 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23395 PF00005 ABC transporter F3X89_23400 PF03466 LysR substrate binding domain F3X89_23400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_23405 PF01638 HxlR-like helix-turn-helix F3X89_23415 PF09334 tRNA synthetases class I (M) F3X89_23415 PF08264 Anticodon-binding domain of tRNA F3X89_23420 PF07859 alpha/beta hydrolase fold F3X89_23440 PF08659 KR domain F3X89_23440 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_23440 PF14765 Polyketide synthase dehydratase F3X89_23440 PF16197 Ketoacyl-synthetase C-terminal extension F3X89_23440 PF00550 Phosphopantetheine attachment site F3X89_23440 PF00698 Acyl transferase domain F3X89_23440 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_23440 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_23440 PF00107 Zinc-binding dehydrogenase F3X89_23445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_23445 PF03466 LysR substrate binding domain F3X89_23450 PF00857 Isochorismatase family F3X89_23455 PF00296 Luciferase-like monooxygenase F3X89_23460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_23460 PF03466 LysR substrate binding domain F3X89_23465 PF02678 Pirin F3X89_23465 PF05726 Pirin C-terminal cupin domain F3X89_23480 PF03466 LysR substrate binding domain F3X89_23480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_23485 PF01979 Amidohydrolase family F3X89_23500 PF12833 Helix-turn-helix domain F3X89_23500 PF12852 Cupin F3X89_23510 PF00248 Aldo/keto reductase family F3X89_23520 PF07690 Major Facilitator Superfamily F3X89_23530 PF02371 Transposase IS116/IS110/IS902 family F3X89_23530 PF01548 Transposase F3X89_23550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_23550 PF03466 LysR substrate binding domain F3X89_23555 PF00933 Glycosyl hydrolase family 3 N terminal domain F3X89_23555 PF14310 Fibronectin type III-like domain F3X89_23555 PF01915 Glycosyl hydrolase family 3 C-terminal domain F3X89_23560 PF01546 Peptidase family M20/M25/M40 F3X89_23560 PF07687 Peptidase dimerisation domain F3X89_23565 PF00005 ABC transporter F3X89_23565 PF17912 MalK OB fold domain F3X89_23570 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23575 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23580 PF01547 Bacterial extracellular solute-binding protein F3X89_23610 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23615 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_23615 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23620 PF00005 ABC transporter F3X89_23620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_23625 PF08220 DeoR-like helix-turn-helix domain F3X89_23625 PF00455 DeoR C terminal sensor domain F3X89_23630 PF01546 Peptidase family M20/M25/M40 F3X89_23645 PF00459 Inositol monophosphatase family F3X89_23650 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F3X89_23690 PF00005 ABC transporter F3X89_23695 PF02653 Branched-chain amino acid transport system / permease component F3X89_23700 PF02126 Phosphotriesterase family F3X89_23710 PF00294 pfkB family carbohydrate kinase F3X89_23715 PF00290 Tryptophan synthase alpha chain F3X89_23720 PF07687 Peptidase dimerisation domain F3X89_23720 PF01546 Peptidase family M20/M25/M40 F3X89_23725 PF00294 pfkB family carbohydrate kinase F3X89_23730 PF00005 ABC transporter F3X89_23730 PF03459 TOBE domain F3X89_23730 PF17912 MalK OB fold domain F3X89_23735 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23740 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23755 PF00701 Dihydrodipicolinate synthetase family F3X89_23765 PF04542 Sigma-70 region 2 F3X89_23765 PF08281 Sigma-70, region 4 F3X89_23795 PF00005 ABC transporter F3X89_23795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_23800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_23800 PF00005 ABC transporter F3X89_23805 PF00701 Dihydrodipicolinate synthetase family F3X89_23810 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23815 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_23825 PF00392 Bacterial regulatory proteins, gntR family F3X89_23825 PF07729 FCD domain F3X89_23830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3X89_23830 PF00356 Bacterial regulatory proteins, lacI family F3X89_23840 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23845 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_23850 PF08402 TOBE domain F3X89_23850 PF00005 ABC transporter F3X89_23860 PF02728 Copper amine oxidase, N3 domain F3X89_23860 PF01179 Copper amine oxidase, enzyme domain F3X89_23880 PF00135 Carboxylesterase family F3X89_23885 PF00135 Carboxylesterase family F3X89_23895 PF00440 Bacterial regulatory proteins, tetR family F3X89_23905 PF00933 Glycosyl hydrolase family 3 N terminal domain F3X89_23905 PF14310 Fibronectin type III-like domain F3X89_23905 PF07691 PA14 domain F3X89_23905 PF01915 Glycosyl hydrolase family 3 C-terminal domain F3X89_23915 PF01850 PIN domain F3X89_23920 PF01063 Amino-transferase class IV F3X89_23930 PF01810 LysE type translocator F3X89_23935 PF00072 Response regulator receiver domain F3X89_23935 PF00196 Bacterial regulatory proteins, luxR family F3X89_23940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_23940 PF00672 HAMP domain F3X89_23940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F3X89_23940 PF00072 Response regulator receiver domain F3X89_23940 PF00512 His Kinase A (phospho-acceptor) domain F3X89_23940 PF01627 Hpt domain F3X89_23945 PF06508 Queuosine biosynthesis protein QueC F3X89_23950 PF01242 6-pyruvoyl tetrahydropterin synthase F3X89_23955 PF04055 Radical SAM superfamily F3X89_23960 PF00392 Bacterial regulatory proteins, gntR family F3X89_23960 PF07729 FCD domain F3X89_23970 PF12697 Alpha/beta hydrolase family F3X89_23975 PF01613 Flavin reductase like domain F3X89_23980 PF00296 Luciferase-like monooxygenase F3X89_23985 PF00171 Aldehyde dehydrogenase family F3X89_24000 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24005 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24010 PF00005 ABC transporter F3X89_24010 PF08402 TOBE domain F3X89_24025 PF00296 Luciferase-like monooxygenase F3X89_24030 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_24030 PF00005 ABC transporter F3X89_24035 PF02653 Branched-chain amino acid transport system / permease component F3X89_24040 PF02653 Branched-chain amino acid transport system / permease component F3X89_24050 PF00005 ABC transporter F3X89_24055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_24055 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_24060 PF10282 Lactonase, 7-bladed beta-propeller F3X89_24065 PF00701 Dihydrodipicolinate synthetase family F3X89_24070 PF03786 D-mannonate dehydratase (UxuA) F3X89_24075 PF00392 Bacterial regulatory proteins, gntR family F3X89_24075 PF07729 FCD domain F3X89_24080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_24085 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24090 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_24090 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24095 PF00005 ABC transporter F3X89_24095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_24100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_24100 PF00005 ABC transporter F3X89_24110 PF00072 Response regulator receiver domain F3X89_24110 PF00486 Transcriptional regulatory protein, C terminal F3X89_24115 PF00512 His Kinase A (phospho-acceptor) domain F3X89_24115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_24115 PF00672 HAMP domain F3X89_24135 PF08021 Siderophore-interacting FAD-binding domain F3X89_24135 PF04954 Siderophore-interacting protein F3X89_24145 PF00593 TonB dependent receptor F3X89_24145 PF07715 TonB-dependent Receptor Plug Domain F3X89_24155 PF04545 Sigma-70, region 4 F3X89_24155 PF04542 Sigma-70 region 2 F3X89_24160 PF07687 Peptidase dimerisation domain F3X89_24160 PF01546 Peptidase family M20/M25/M40 F3X89_24165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_24170 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24175 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24175 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_24180 PF00005 ABC transporter F3X89_24180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_24185 PF02607 B12 binding domain F3X89_24185 PF02574 Homocysteine S-methyltransferase F3X89_24185 PF00809 Pterin binding enzyme F3X89_24185 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3X89_24185 PF02310 B12 binding domain F3X89_24190 PF08450 SMP-30/Gluconolactonase/LRE-like region F3X89_24200 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_24200 PF00107 Zinc-binding dehydrogenase F3X89_24205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_24205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_24215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_24215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3X89_24225 PF00356 Bacterial regulatory proteins, lacI family F3X89_24235 PF02653 Branched-chain amino acid transport system / permease component F3X89_24240 PF00005 ABC transporter F3X89_24245 PF12833 Helix-turn-helix domain F3X89_24250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_24265 PF00005 ABC transporter F3X89_24270 PF02653 Branched-chain amino acid transport system / permease component F3X89_24275 PF00106 short chain dehydrogenase F3X89_24280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_24280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_24285 PF01266 FAD dependent oxidoreductase F3X89_24290 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24290 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_24295 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_24305 PF01266 FAD dependent oxidoreductase F3X89_24310 PF00300 Histidine phosphatase superfamily (branch 1) F3X89_24310 PF00106 short chain dehydrogenase F3X89_24315 PF12802 MarR family F3X89_24320 PF00005 ABC transporter F3X89_24320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_24325 PF17912 MalK OB fold domain F3X89_24325 PF03459 TOBE domain F3X89_24325 PF00005 ABC transporter F3X89_24330 PF00480 ROK family F3X89_24335 PF00571 CBS domain F3X89_24335 PF00478 IMP dehydrogenase / GMP reductase domain F3X89_24350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_24350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_24360 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24365 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_24375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_24380 PF07859 alpha/beta hydrolase fold F3X89_24385 PF00356 Bacterial regulatory proteins, lacI family F3X89_24390 PF00294 pfkB family carbohydrate kinase F3X89_24395 PF08013 Tagatose 6 phosphate kinase F3X89_24400 PF13419 Haloacid dehalogenase-like hydrolase F3X89_24405 PF04198 Putative sugar-binding domain F3X89_24410 PF01791 DeoC/LacD family aldolase F3X89_24415 PF00480 ROK family F3X89_24420 PF13407 Periplasmic binding protein domain F3X89_24425 PF02653 Branched-chain amino acid transport system / permease component F3X89_24430 PF00005 ABC transporter F3X89_24435 PF00392 Bacterial regulatory proteins, gntR family F3X89_24435 PF07729 FCD domain F3X89_24450 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24455 PF00701 Dihydrodipicolinate synthetase family F3X89_24460 PF04324 BFD-like [2Fe-2S] binding domain F3X89_24460 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_24465 PF00005 ABC transporter F3X89_24470 PF00449 Urease alpha-subunit, N-terminal domain F3X89_24470 PF01979 Amidohydrolase family F3X89_24480 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F3X89_24480 PF00171 Aldehyde dehydrogenase family F3X89_24480 PF01619 Proline dehydrogenase F3X89_24480 PF14850 DNA-binding domain of Proline dehydrogenase F3X89_24485 PF01037 Lrp/AsnC ligand binding domain F3X89_24490 PF00890 FAD binding domain F3X89_24500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_24505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3X89_24510 PF02570 Precorrin-8X methylmutase F3X89_24515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_24520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_24525 PF02571 Precorrin-6x reductase CbiJ/CobK F3X89_24530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_24535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3X89_24540 PF01402 Ribbon-helix-helix protein, copG family F3X89_24540 PF08753 NikR C terminal nickel binding domain F3X89_24550 PF00356 Bacterial regulatory proteins, lacI family F3X89_24560 PF00355 Rieske [2Fe-2S] domain F3X89_24565 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_24565 PF14759 Reductase C-terminal F3X89_24570 PF03358 NADPH-dependent FMN reductase F3X89_24575 PF00892 EamA-like transporter family F3X89_24580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3X89_24580 PF13807 G-rich domain on putative tyrosine kinase F3X89_24580 PF02706 Chain length determinant protein F3X89_24585 PF00483 Nucleotidyl transferase F3X89_24590 PF00535 Glycosyl transferase family 2 F3X89_24595 PF00535 Glycosyl transferase family 2 F3X89_24600 PF00535 Glycosyl transferase family 2 F3X89_24610 PF00722 Glycosyl hydrolases family 16 F3X89_24615 PF01757 Acyltransferase family F3X89_24620 PF01943 Polysaccharide biosynthesis protein F3X89_24625 PF00535 Glycosyl transferase family 2 F3X89_24630 PF04230 Polysaccharide pyruvyl transferase F3X89_24635 PF00535 Glycosyl transferase family 2 F3X89_24640 PF11089 Exopolysaccharide production repressor F3X89_24645 PF02397 Bacterial sugar transferase F3X89_24650 PF02563 Polysaccharide biosynthesis/export protein F3X89_24660 PF01757 Acyltransferase family F3X89_24670 PF02653 Branched-chain amino acid transport system / permease component F3X89_24675 PF00005 ABC transporter F3X89_24680 PF13407 Periplasmic binding protein domain F3X89_24685 PF00248 Aldo/keto reductase family F3X89_24690 PF08666 SAF domain F3X89_24690 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F3X89_24695 PF00392 Bacterial regulatory proteins, gntR family F3X89_24695 PF07729 FCD domain F3X89_24700 PF00703 Glycosyl hydrolases family 2 F3X89_24700 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F3X89_24700 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 F3X89_24705 PF12833 Helix-turn-helix domain F3X89_24710 PF02056 Family 4 glycosyl hydrolase F3X89_24710 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3X89_24715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_24720 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24725 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_24725 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24730 PF00005 ABC transporter F3X89_24730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_24735 PF02056 Family 4 glycosyl hydrolase F3X89_24735 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3X89_24750 PF13847 Methyltransferase domain F3X89_24755 PF00027 Cyclic nucleotide-binding domain F3X89_24755 PF13302 Acetyltransferase (GNAT) domain F3X89_24760 PF00005 ABC transporter F3X89_24760 PF00664 ABC transporter transmembrane region F3X89_24770 PF00534 Glycosyl transferases group 1 F3X89_24780 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_24780 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24785 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_24795 PF00005 ABC transporter F3X89_24795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_24820 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_24820 PF00672 HAMP domain F3X89_24820 PF02743 Cache domain F3X89_24825 PF00534 Glycosyl transferases group 1 F3X89_24825 PF13439 Glycosyltransferase Family 4 F3X89_24835 PF00753 Metallo-beta-lactamase superfamily F3X89_24850 PF12857 TOBE-like domain F3X89_24850 PF00005 ABC transporter F3X89_24855 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_24855 PF00005 ABC transporter F3X89_24860 PF02653 Branched-chain amino acid transport system / permease component F3X89_24870 PF13458 Periplasmic binding protein F3X89_24875 PF00206 Lyase F3X89_24875 PF10397 Adenylosuccinate lyase C-terminus F3X89_24880 PF00775 Dioxygenase F3X89_24885 PF00775 Dioxygenase F3X89_24885 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal F3X89_24890 PF02627 Carboxymuconolactone decarboxylase family F3X89_24895 PF12697 Alpha/beta hydrolase family F3X89_24900 PF03466 LysR substrate binding domain F3X89_24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_24905 PF01494 FAD binding domain F3X89_24915 PF09339 IclR helix-turn-helix domain F3X89_24915 PF01614 Bacterial transcriptional regulator F3X89_24920 PF01144 Coenzyme A transferase F3X89_24925 PF01144 Coenzyme A transferase F3X89_24930 PF02803 Thiolase, C-terminal domain F3X89_24930 PF00108 Thiolase, N-terminal domain F3X89_24940 PF04679 ATP dependent DNA ligase C terminal region F3X89_24940 PF01068 ATP dependent DNA ligase domain F3X89_24940 PF13298 DNA polymerase Ligase (LigD) F3X89_24965 PF13396 Phospholipase_D-nuclease N-terminal F3X89_24965 PF13091 PLD-like domain F3X89_24980 PF01370 NAD dependent epimerase/dehydratase family F3X89_24985 PF12857 TOBE-like domain F3X89_24985 PF00005 ABC transporter F3X89_24990 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_24995 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3X89_25010 PF00072 Response regulator receiver domain F3X89_25010 PF00486 Transcriptional regulatory protein, C terminal F3X89_25015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_25015 PF13492 GAF domain F3X89_25015 PF00512 His Kinase A (phospho-acceptor) domain F3X89_25015 PF13493 Domain of unknown function (DUF4118) F3X89_25015 PF02702 Osmosensitive K+ channel His kinase sensor domain F3X89_25020 PF02669 K+-transporting ATPase, c chain F3X89_25030 PF03814 Potassium-transporting ATPase A subunit F3X89_25050 PF06964 Alpha-L-arabinofuranosidase C-terminal domain F3X89_25065 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25070 PF00005 ABC transporter F3X89_25070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_25075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_25075 PF00005 ABC transporter F3X89_25085 PF17200 Single Cache domain 2 F3X89_25085 PF07730 Histidine kinase F3X89_25090 PF00196 Bacterial regulatory proteins, luxR family F3X89_25090 PF00072 Response regulator receiver domain F3X89_25095 PF00512 His Kinase A (phospho-acceptor) domain F3X89_25095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_25095 PF00072 Response regulator receiver domain F3X89_25095 PF09308 LuxQ, periplasmic F3X89_25100 PF00990 Diguanylate cyclase, GGDEF domain F3X89_25100 PF00072 Response regulator receiver domain F3X89_25110 PF00596 Class II Aldolase and Adducin N-terminal domain F3X89_25115 PF17042 Nucleotide-binding C-terminal domain F3X89_25115 PF07005 Sugar-binding N-terminal domain F3X89_25120 PF01261 Xylose isomerase-like TIM barrel F3X89_25125 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3X89_25125 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3X89_25130 PF07690 Major Facilitator Superfamily F3X89_25135 PF00356 Bacterial regulatory proteins, lacI family F3X89_25135 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3X89_25140 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_25145 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25150 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25155 PF00005 ABC transporter F3X89_25160 PF01042 Endoribonuclease L-PSP F3X89_25175 PF00596 Class II Aldolase and Adducin N-terminal domain F3X89_25185 PF02653 Branched-chain amino acid transport system / permease component F3X89_25190 PF02653 Branched-chain amino acid transport system / permease component F3X89_25195 PF00005 ABC transporter F3X89_25205 PF00356 Bacterial regulatory proteins, lacI family F3X89_25210 PF01261 Xylose isomerase-like TIM barrel F3X89_25225 PF00535 Glycosyl transferase family 2 F3X89_25245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_25245 PF03466 LysR substrate binding domain F3X89_25265 PF00313 'Cold-shock' DNA-binding domain F3X89_25275 PF00484 Carbonic anhydrase F3X89_25280 PF00916 Sulfate permease family F3X89_25280 PF01740 STAS domain F3X89_25295 PF00501 AMP-binding enzyme F3X89_25295 PF13193 AMP-binding enzyme C-terminal domain F3X89_25295 PF00668 Condensation domain F3X89_25295 PF00550 Phosphopantetheine attachment site F3X89_25295 PF00975 Thioesterase domain F3X89_25305 PF00486 Transcriptional regulatory protein, C terminal F3X89_25305 PF00072 Response regulator receiver domain F3X89_25310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_25310 PF08918 PhoQ Sensor F3X89_25315 PF01381 Helix-turn-helix F3X89_25335 PF07568 Histidine kinase F3X89_25335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_25335 PF12282 Signal transduction histidine kinase F3X89_25350 PF02563 Polysaccharide biosynthesis/export protein F3X89_25355 PF13439 Glycosyltransferase Family 4 F3X89_25355 PF00534 Glycosyl transferases group 1 F3X89_25365 PF02397 Bacterial sugar transferase F3X89_25390 PF00535 Glycosyl transferase family 2 F3X89_25405 PF03275 UDP-galactopyranose mutase F3X89_25410 PF13439 Glycosyltransferase Family 4 F3X89_25410 PF00534 Glycosyl transferases group 1 F3X89_25430 PF00141 Peroxidase F3X89_25435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_25435 PF03466 LysR substrate binding domain F3X89_25455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_25455 PF03466 LysR substrate binding domain F3X89_25460 PF00296 Luciferase-like monooxygenase F3X89_25470 PF00296 Luciferase-like monooxygenase F3X89_25480 PF02653 Branched-chain amino acid transport system / permease component F3X89_25485 PF02653 Branched-chain amino acid transport system / permease component F3X89_25485 PF11862 Domain of unknown function (DUF3382) F3X89_25490 PF00005 ABC transporter F3X89_25490 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3X89_25495 PF00005 ABC transporter F3X89_25500 PF01613 Flavin reductase like domain F3X89_25515 PF01546 Peptidase family M20/M25/M40 F3X89_25515 PF07687 Peptidase dimerisation domain F3X89_25525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_25530 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25535 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_25535 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25540 PF00392 Bacterial regulatory proteins, gntR family F3X89_25540 PF07729 FCD domain F3X89_25545 PF00202 Aminotransferase class-III F3X89_25555 PF01425 Amidase F3X89_25560 PF00202 Aminotransferase class-III F3X89_25565 PF00005 ABC transporter F3X89_25565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_25570 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_25570 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25575 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_25585 PF01384 Phosphate transporter family F3X89_25590 PF01865 Protein of unknown function DUF47 F3X89_25595 PF08402 TOBE domain F3X89_25595 PF00005 ABC transporter F3X89_25600 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25605 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25610 PF13416 Bacterial extracellular solute-binding protein F3X89_25615 PF00892 EamA-like transporter family F3X89_25640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_25645 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25650 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25650 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_25655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_25655 PF00005 ABC transporter F3X89_25660 PF01638 HxlR-like helix-turn-helix F3X89_25665 PF16197 Ketoacyl-synthetase C-terminal extension F3X89_25665 PF09277 Erythronolide synthase, docking F3X89_25665 PF08990 Erythronolide synthase docking F3X89_25665 PF00698 Acyl transferase domain F3X89_25665 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_25665 PF08659 KR domain F3X89_25665 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_25665 PF00550 Phosphopantetheine attachment site F3X89_25665 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_25665 PF14765 Polyketide synthase dehydratase F3X89_25670 PF00005 ABC transporter F3X89_25670 PF00664 ABC transporter transmembrane region F3X89_25675 PF00535 Glycosyl transferase family 2 F3X89_25680 PF00535 Glycosyl transferase family 2 F3X89_25685 PF01757 Acyltransferase family F3X89_25690 PF07690 Major Facilitator Superfamily F3X89_25695 PF00296 Luciferase-like monooxygenase F3X89_25700 PF03972 MmgE/PrpD family F3X89_25705 PF00005 ABC transporter F3X89_25710 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25715 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25720 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_25735 PF01032 FecCD transport family F3X89_25740 PF01032 FecCD transport family F3X89_25745 PF00005 ABC transporter F3X89_25750 PF00593 TonB dependent receptor F3X89_25750 PF07715 TonB-dependent Receptor Plug Domain F3X89_25755 PF00990 Diguanylate cyclase, GGDEF domain F3X89_25755 PF03707 Bacterial signalling protein N terminal repeat F3X89_25755 PF13188 PAS domain F3X89_25755 PF00563 EAL domain F3X89_25765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_25765 PF00512 His Kinase A (phospho-acceptor) domain F3X89_25765 PF00672 HAMP domain F3X89_25770 PF00486 Transcriptional regulatory protein, C terminal F3X89_25770 PF00072 Response regulator receiver domain F3X89_25775 PF00529 HlyD membrane-fusion protein of T1SS F3X89_25775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_25780 PF00873 AcrB/AcrD/AcrF family F3X89_25785 PF02321 Outer membrane efflux protein F3X89_25790 PF03466 LysR substrate binding domain F3X89_25790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_25805 PF07859 alpha/beta hydrolase fold F3X89_25815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_25825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_25825 PF00005 ABC transporter F3X89_25830 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25830 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_25835 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_25845 PF00378 Enoyl-CoA hydratase/isomerase F3X89_25850 PF13607 Succinyl-CoA ligase like flavodoxin domain F3X89_25850 PF13380 CoA binding domain F3X89_25860 PF05853 beta-keto acid cleavage enzyme F3X89_25865 PF14525 AraC-binding-like domain F3X89_25865 PF12833 Helix-turn-helix domain F3X89_25870 PF03466 LysR substrate binding domain F3X89_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_25880 PF00356 Bacterial regulatory proteins, lacI family F3X89_25885 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_25890 PF00005 ABC transporter F3X89_25895 PF01266 FAD dependent oxidoreductase F3X89_25915 PF00005 ABC transporter F3X89_25915 PF17912 MalK OB fold domain F3X89_25915 PF03459 TOBE domain F3X89_25925 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25930 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_25935 PF01547 Bacterial extracellular solute-binding protein F3X89_25940 PF02734 DAK2 domain F3X89_25945 PF02733 Dak1 domain F3X89_25955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3X89_25955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3X89_25960 PF02653 Branched-chain amino acid transport system / permease component F3X89_25965 PF00005 ABC transporter F3X89_25975 PF13407 Periplasmic binding protein domain F3X89_25980 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term F3X89_25980 PF10727 Rossmann-like domain F3X89_25985 PF17042 Nucleotide-binding C-terminal domain F3X89_25985 PF07005 Sugar-binding N-terminal domain F3X89_25990 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain F3X89_25990 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain F3X89_25995 PF00392 Bacterial regulatory proteins, gntR family F3X89_25995 PF07729 FCD domain F3X89_26005 PF02673 Bacitracin resistance protein BacA F3X89_26010 PF03831 PhnA domain F3X89_26010 PF08274 PhnA Zinc-Ribbon F3X89_26020 PF08543 Phosphomethylpyrimidine kinase F3X89_26025 PF02581 Thiamine monophosphate synthase F3X89_26030 PF02110 Hydroxyethylthiazole kinase family F3X89_26045 PF02798 Glutathione S-transferase, N-terminal domain F3X89_26060 PF02954 Bacterial regulatory protein, Fis family F3X89_26060 PF00072 Response regulator receiver domain F3X89_26060 PF00158 Sigma-54 interaction domain F3X89_26065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_26065 PF00512 His Kinase A (phospho-acceptor) domain F3X89_26070 PF00375 Sodium:dicarboxylate symporter family F3X89_26075 PF00571 CBS domain F3X89_26080 PF12704 MacB-like periplasmic core domain F3X89_26080 PF00005 ABC transporter F3X89_26080 PF02687 FtsX-like permease family F3X89_26090 PF00005 ABC transporter F3X89_26100 PF12833 Helix-turn-helix domain F3X89_26105 PF01614 Bacterial transcriptional regulator F3X89_26105 PF09339 IclR helix-turn-helix domain F3X89_26110 PF01522 Polysaccharide deacetylase F3X89_26115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_26130 PF12833 Helix-turn-helix domain F3X89_26135 PF00593 TonB dependent receptor F3X89_26135 PF07715 TonB-dependent Receptor Plug Domain F3X89_26145 PF00756 Putative esterase F3X89_26150 PF00005 ABC transporter F3X89_26155 PF01032 FecCD transport family F3X89_26160 PF01266 FAD dependent oxidoreductase F3X89_26165 PF01037 Lrp/AsnC ligand binding domain F3X89_26170 PF00005 ABC transporter F3X89_26170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_26175 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26175 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_26180 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26195 PF00202 Aminotransferase class-III F3X89_26210 PF01266 FAD dependent oxidoreductase F3X89_26215 PF01042 Endoribonuclease L-PSP F3X89_26225 PF00171 Aldehyde dehydrogenase family F3X89_26230 PF00180 Isocitrate/isopropylmalate dehydrogenase F3X89_26235 PF00171 Aldehyde dehydrogenase family F3X89_26245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_26250 PF07687 Peptidase dimerisation domain F3X89_26250 PF01546 Peptidase family M20/M25/M40 F3X89_26255 PF01266 FAD dependent oxidoreductase F3X89_26260 PF18014 Acetyltransferase (GNAT) domain F3X89_26260 PF13673 Acetyltransferase (GNAT) domain F3X89_26275 PF09339 IclR helix-turn-helix domain F3X89_26275 PF01614 Bacterial transcriptional regulator F3X89_26285 PF01548 Transposase F3X89_26285 PF02371 Transposase IS116/IS110/IS902 family F3X89_26295 PF13505 Outer membrane protein beta-barrel domain F3X89_26325 PF01061 ABC-2 type transporter F3X89_26345 PF05159 Capsule polysaccharide biosynthesis protein F3X89_26350 PF05159 Capsule polysaccharide biosynthesis protein F3X89_26360 PF00005 ABC transporter F3X89_26385 PF01728 FtsJ-like methyltransferase F3X89_26400 PF00486 Transcriptional regulatory protein, C terminal F3X89_26400 PF00072 Response regulator receiver domain F3X89_26405 PF00512 His Kinase A (phospho-acceptor) domain F3X89_26405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_26405 PF00672 HAMP domain F3X89_26410 PF12704 MacB-like periplasmic core domain F3X89_26410 PF00005 ABC transporter F3X89_26410 PF02687 FtsX-like permease family F3X89_26415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_26425 PF00491 Arginase family F3X89_26430 PF00155 Aminotransferase class I and II F3X89_26435 PF00296 Luciferase-like monooxygenase F3X89_26440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_26440 PF03466 LysR substrate binding domain F3X89_26450 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_26455 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26460 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26465 PF00005 ABC transporter F3X89_26485 PF00196 Bacterial regulatory proteins, luxR family F3X89_26485 PF00072 Response regulator receiver domain F3X89_26490 PF07730 Histidine kinase F3X89_26490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_26490 PF00672 HAMP domain F3X89_26500 PF00701 Dihydrodipicolinate synthetase family F3X89_26510 PF01321 Creatinase/Prolidase N-terminal domain F3X89_26510 PF00557 Metallopeptidase family M24 F3X89_26515 PF17912 MalK OB fold domain F3X89_26515 PF00005 ABC transporter F3X89_26520 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26525 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26535 PF01053 Cys/Met metabolism PLP-dependent enzyme F3X89_26540 PF07729 FCD domain F3X89_26540 PF00392 Bacterial regulatory proteins, gntR family F3X89_26550 PF13472 GDSL-like Lipase/Acylhydrolase family F3X89_26550 PF07859 alpha/beta hydrolase fold F3X89_26555 PF01979 Amidohydrolase family F3X89_26560 PF01979 Amidohydrolase family F3X89_26570 PF08402 TOBE domain F3X89_26570 PF00005 ABC transporter F3X89_26580 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26585 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26590 PF01177 Asp/Glu/Hydantoin racemase F3X89_26600 PF00296 Luciferase-like monooxygenase F3X89_26605 PF00296 Luciferase-like monooxygenase F3X89_26610 PF01546 Peptidase family M20/M25/M40 F3X89_26610 PF07687 Peptidase dimerisation domain F3X89_26620 PF00005 ABC transporter F3X89_26625 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_26635 PF00296 Luciferase-like monooxygenase F3X89_26640 PF00535 Glycosyl transferase family 2 F3X89_26650 PF02653 Branched-chain amino acid transport system / permease component F3X89_26655 PF00005 ABC transporter F3X89_26660 PF13407 Periplasmic binding protein domain F3X89_26665 PF02770 Acyl-CoA dehydrogenase, middle domain F3X89_26665 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_26665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_26670 PF08028 Acyl-CoA dehydrogenase, C-terminal domain F3X89_26670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3X89_26675 PF01011 PQQ enzyme repeat F3X89_26695 PF00480 ROK family F3X89_26705 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26710 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26715 PF17912 MalK OB fold domain F3X89_26715 PF00005 ABC transporter F3X89_26720 PF08532 Beta-galactosidase trimerisation domain F3X89_26720 PF02449 Beta-galactosidase F3X89_26720 PF08533 Beta-galactosidase C-terminal domain F3X89_26770 PF08031 Berberine and berberine like F3X89_26770 PF01565 FAD binding domain F3X89_26775 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_26800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F3X89_26815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3X89_26820 PF00106 short chain dehydrogenase F3X89_26825 PF00440 Bacterial regulatory proteins, tetR family F3X89_26860 PF00248 Aldo/keto reductase family F3X89_26865 PF03466 LysR substrate binding domain F3X89_26865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_26875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3X89_26885 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3X89_26885 PF03807 NADP oxidoreductase coenzyme F420-dependent F3X89_26895 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26900 PF00005 ABC transporter F3X89_26900 PF00571 CBS domain F3X89_26905 PF00313 'Cold-shock' DNA-binding domain F3X89_26910 PF06776 Invasion associated locus B (IalB) protein F3X89_26930 PF03895 YadA-like membrane anchor domain F3X89_26930 PF05658 Head domain of trimeric autotransporter adhesin F3X89_26930 PF05662 Coiled stalk of trimeric autotransporter adhesin F3X89_26950 PF00455 DeoR C terminal sensor domain F3X89_26950 PF08220 DeoR-like helix-turn-helix domain F3X89_26955 PF01791 DeoC/LacD family aldolase F3X89_26960 PF00294 pfkB family carbohydrate kinase F3X89_26965 PF00005 ABC transporter F3X89_26965 PF17912 MalK OB fold domain F3X89_26975 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26980 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_26985 PF00072 Response regulator receiver domain F3X89_26985 PF00158 Sigma-54 interaction domain F3X89_26985 PF02954 Bacterial regulatory protein, Fis family F3X89_26990 PF00512 His Kinase A (phospho-acceptor) domain F3X89_26990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_26995 PF00501 AMP-binding enzyme F3X89_26995 PF13193 AMP-binding enzyme C-terminal domain F3X89_26995 PF00668 Condensation domain F3X89_26995 PF00975 Thioesterase domain F3X89_26995 PF00550 Phosphopantetheine attachment site F3X89_27000 PF03033 Glycosyltransferase family 28 N-terminal domain F3X89_27005 PF00356 Bacterial regulatory proteins, lacI family F3X89_27010 PF01547 Bacterial extracellular solute-binding protein F3X89_27015 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27020 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27025 PF07944 Beta-L-arabinofuranosidase, GH127 F3X89_27030 PF17912 MalK OB fold domain F3X89_27030 PF00005 ABC transporter F3X89_27035 PF05199 GMC oxidoreductase F3X89_27035 PF00732 GMC oxidoreductase F3X89_27040 PF01979 Amidohydrolase family F3X89_27040 PF13382 Adenine deaminase C-terminal domain F3X89_27045 PF02798 Glutathione S-transferase, N-terminal domain F3X89_27050 PF00355 Rieske [2Fe-2S] domain F3X89_27050 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_27065 PF00005 ABC transporter F3X89_27075 PF02653 Branched-chain amino acid transport system / permease component F3X89_27090 PF00384 Molybdopterin oxidoreductase F3X89_27100 PF03702 Anhydro-N-acetylmuramic acid kinase F3X89_27105 PF00144 Beta-lactamase F3X89_27110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27110 PF00005 ABC transporter F3X89_27115 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27115 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_27120 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_27130 PF13580 SIS domain F3X89_27135 PF01869 BadF/BadG/BcrA/BcrD ATPase family F3X89_27140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3X89_27145 PF01418 Helix-turn-helix domain, rpiR family F3X89_27145 PF01380 SIS domain F3X89_27155 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F3X89_27155 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F3X89_27160 PF02910 Fumarate reductase flavoprotein C-term F3X89_27160 PF00890 FAD binding domain F3X89_27165 PF02445 Quinolinate synthetase A protein F3X89_27180 PF00392 Bacterial regulatory proteins, gntR family F3X89_27180 PF07729 FCD domain F3X89_27190 PF00005 ABC transporter F3X89_27195 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27200 PF00920 Dehydratase family F3X89_27205 PF03737 Aldolase/RraA F3X89_27210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_27215 PF00005 ABC transporter F3X89_27215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27220 PF00005 ABC transporter F3X89_27220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27230 PF01522 Polysaccharide deacetylase F3X89_27240 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_27240 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27245 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27255 PF03009 Glycerophosphoryl diester phosphodiesterase family F3X89_27260 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27260 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_27265 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27270 PF00005 ABC transporter F3X89_27270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27275 PF00005 ABC transporter F3X89_27280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_27285 PF00356 Bacterial regulatory proteins, lacI family F3X89_27300 PF02631 RecX family F3X89_27305 PF00392 Bacterial regulatory proteins, gntR family F3X89_27305 PF07729 FCD domain F3X89_27310 PF00005 ABC transporter F3X89_27315 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27320 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27330 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_27330 PF00107 Zinc-binding dehydrogenase F3X89_27335 PF08125 Mannitol dehydrogenase C-terminal domain F3X89_27335 PF01232 Mannitol dehydrogenase Rossmann domain F3X89_27340 PF03786 D-mannonate dehydratase (UxuA) F3X89_27345 PF07729 FCD domain F3X89_27345 PF00392 Bacterial regulatory proteins, gntR family F3X89_27350 PF00248 Aldo/keto reductase family F3X89_27360 PF01546 Peptidase family M20/M25/M40 F3X89_27365 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27370 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27375 PF00005 ABC transporter F3X89_27380 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_27385 PF07722 Peptidase C26 F3X89_27390 PF00248 Aldo/keto reductase family F3X89_27395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_27395 PF03466 LysR substrate binding domain F3X89_27400 PF00578 AhpC/TSA family F3X89_27400 PF10417 C-terminal domain of 1-Cys peroxiredoxin F3X89_27410 PF03358 NADPH-dependent FMN reductase F3X89_27415 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) F3X89_27415 PF00722 Glycosyl hydrolases family 16 F3X89_27420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3X89_27420 PF00529 HlyD membrane-fusion protein of T1SS F3X89_27425 PF00664 ABC transporter transmembrane region F3X89_27425 PF00005 ABC transporter F3X89_27430 PF03776 Septum formation topological specificity factor MinE F3X89_27435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3X89_27440 PF03775 Septum formation inhibitor MinC, C-terminal domain F3X89_27445 PF05552 Conserved TM helix F3X89_27445 PF00924 Mechanosensitive ion channel F3X89_27455 PF17763 Glutaminase/Asparaginase C-terminal domain F3X89_27455 PF00710 Asparaginase, N-terminal F3X89_27460 PF00324 Amino acid permease F3X89_27465 PF00206 Lyase F3X89_27465 PF10415 Fumarase C C-terminus F3X89_27470 PF00392 Bacterial regulatory proteins, gntR family F3X89_27470 PF07729 FCD domain F3X89_27480 PF03466 LysR substrate binding domain F3X89_27480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_27485 PF03466 LysR substrate binding domain F3X89_27485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_27495 PF01425 Amidase F3X89_27500 PF07687 Peptidase dimerisation domain F3X89_27500 PF01546 Peptidase family M20/M25/M40 F3X89_27505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27505 PF00005 ABC transporter F3X89_27510 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27510 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_27515 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_27525 PF07729 FCD domain F3X89_27525 PF00392 Bacterial regulatory proteins, gntR family F3X89_27530 PF00291 Pyridoxal-phosphate dependent enzyme F3X89_27535 PF01037 Lrp/AsnC ligand binding domain F3X89_27545 PF13193 AMP-binding enzyme C-terminal domain F3X89_27545 PF00501 AMP-binding enzyme F3X89_27550 PF07687 Peptidase dimerisation domain F3X89_27550 PF01546 Peptidase family M20/M25/M40 F3X89_27555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_27555 PF01842 ACT domain F3X89_27555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_27560 PF00392 Bacterial regulatory proteins, gntR family F3X89_27560 PF07729 FCD domain F3X89_27565 PF02626 Carboxyltransferase domain, subdomain A and B F3X89_27570 PF02682 Carboxyltransferase domain, subdomain C and D F3X89_27575 PF03746 LamB/YcsF family F3X89_27580 PF03466 LysR substrate binding domain F3X89_27580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_27585 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_27590 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27595 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27600 PF00005 ABC transporter F3X89_27605 PF00491 Arginase family F3X89_27620 PF03466 LysR substrate binding domain F3X89_27620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_27625 PF13454 FAD-NAD(P)-binding F3X89_27630 PF00005 ABC transporter F3X89_27635 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_27640 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27645 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27650 PF00005 ABC transporter F3X89_27650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_27655 PF03841 L-seryl-tRNA selenium transferase F3X89_27670 PF01979 Amidohydrolase family F3X89_27675 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27675 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_27680 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_27710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3X89_27710 PF00205 Thiamine pyrophosphate enzyme, central domain F3X89_27710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3X89_27715 PF00682 HMGL-like F3X89_27715 PF08502 LeuA allosteric (dimerisation) domain F3X89_27725 PF04454 Encapsulating protein for peroxidase F3X89_27730 PF04261 Dyp-type peroxidase family F3X89_27745 PF17871 AAA lid domain F3X89_27745 PF00004 ATPase family associated with various cellular activities (AAA) F3X89_27745 PF10431 C-terminal, D2-small domain, of ClpB protein F3X89_27745 PF02861 Clp amino terminal domain, pathogenicity island component F3X89_27745 PF07724 AAA domain (Cdc48 subfamily) F3X89_27750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_27750 PF00512 His Kinase A (phospho-acceptor) domain F3X89_27755 PF00158 Sigma-54 interaction domain F3X89_27755 PF02954 Bacterial regulatory protein, Fis family F3X89_27755 PF00072 Response regulator receiver domain F3X89_27765 PF00226 DnaJ domain F3X89_27765 PF01556 DnaJ C terminal domain F3X89_27770 PF00012 Hsp70 protein F3X89_27775 PF03454 MoeA C-terminal region (domain IV) F3X89_27775 PF00994 Probable molybdopterin binding domain F3X89_27775 PF03453 MoeA N-terminal region (domain I and II) F3X89_27780 PF00924 Mechanosensitive ion channel F3X89_27780 PF05552 Conserved TM helix F3X89_27785 PF01025 GrpE F3X89_27795 PF16916 Dimerisation domain of Zinc Transporter F3X89_27795 PF01545 Cation efflux family F3X89_27805 PF02322 Cytochrome bd terminal oxidase subunit II F3X89_27810 PF01654 Cytochrome bd terminal oxidase subunit I F3X89_27815 PF00384 Molybdopterin oxidoreductase F3X89_27820 PF01062 Bestrophin, RFP-TM, chloride channel F3X89_27830 PF12951 Passenger-associated-transport-repeat F3X89_27850 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_27855 PF00106 short chain dehydrogenase F3X89_27880 PF00248 Aldo/keto reductase family F3X89_27885 PF03466 LysR substrate binding domain F3X89_27885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_27890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3X89_27910 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_27915 PF08402 TOBE domain F3X89_27915 PF00005 ABC transporter F3X89_27920 PF00459 Inositol monophosphatase family F3X89_27945 PF07238 PilZ domain F3X89_27945 PF00535 Glycosyl transferase family 2 F3X89_27945 PF03552 Cellulose synthase F3X89_27955 PF01270 Glycosyl hydrolases family 8 F3X89_27965 PF00990 Diguanylate cyclase, GGDEF domain F3X89_27965 PF00360 Phytochrome region F3X89_27965 PF01590 GAF domain F3X89_27965 PF00563 EAL domain F3X89_27970 PF00356 Bacterial regulatory proteins, lacI family F3X89_27975 PF13407 Periplasmic binding protein domain F3X89_27980 PF00005 ABC transporter F3X89_27985 PF02653 Branched-chain amino acid transport system / permease component F3X89_28000 PF00574 Clp protease F3X89_28020 PF00263 Bacterial type II and III secretion system protein F3X89_28020 PF03958 Bacterial type II/III secretion system short domain F3X89_28030 PF08334 Type II secretion system (T2SS), protein G F3X89_28030 PF07963 Prokaryotic N-terminal methylation motif F3X89_28050 PF00482 Type II secretion system (T2SS), protein F F3X89_28055 PF00437 Type II/IV secretion system protein F3X89_28055 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F3X89_28080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3X89_28080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3X89_28090 PF10502 Signal peptidase, peptidase S26 F3X89_28110 PF01476 LysM domain F3X89_28110 PF03734 L,D-transpeptidase catalytic domain F3X89_28125 PF01266 FAD dependent oxidoreductase F3X89_28130 PF07687 Peptidase dimerisation domain F3X89_28130 PF01546 Peptidase family M20/M25/M40 F3X89_28135 PF00211 Adenylate and Guanylate cyclase catalytic domain F3X89_28155 PF00155 Aminotransferase class I and II F3X89_28165 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F3X89_28170 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F3X89_28180 PF02423 Ornithine cyclodeaminase/mu-crystallin family F3X89_28190 PF00596 Class II Aldolase and Adducin N-terminal domain F3X89_28200 PF00487 Fatty acid desaturase F3X89_28210 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_28215 PF00005 ABC transporter F3X89_28225 PF09347 Domain of unknown function (DUF1989) F3X89_28230 PF18140 Propionyl-coenzyme A carboxylase BT domain F3X89_28230 PF02785 Biotin carboxylase C-terminal domain F3X89_28230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3X89_28230 PF00364 Biotin-requiring enzyme F3X89_28230 PF00289 Biotin carboxylase, N-terminal domain F3X89_28235 PF01425 Amidase F3X89_28240 PF13180 PDZ domain F3X89_28270 PF00561 alpha/beta hydrolase fold F3X89_28295 PF01593 Flavin containing amine oxidoreductase F3X89_28300 PF02027 RolB/RolC glucosidase family F3X89_28335 PF03466 LysR substrate binding domain F3X89_28335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_28340 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3X89_28350 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3X89_28350 PF04324 BFD-like [2Fe-2S] binding domain F3X89_28355 PF01266 FAD dependent oxidoreductase F3X89_28360 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_28365 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_28370 PF00005 ABC transporter F3X89_28385 PF03466 LysR substrate binding domain F3X89_28385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_28390 PF07063 Domain of unknown function (DUF1338) F3X89_28395 PF00171 Aldehyde dehydrogenase family F3X89_28400 PF00155 Aminotransferase class I and II F3X89_28405 PF13183 4Fe-4S dicluster domain F3X89_28405 PF01565 FAD binding domain F3X89_28405 PF02913 FAD linked oxidases, C-terminal domain F3X89_28415 PF01037 Lrp/AsnC ligand binding domain F3X89_28420 PF01425 Amidase F3X89_28425 PF01593 Flavin containing amine oxidoreductase F3X89_28425 PF02027 RolB/RolC glucosidase family F3X89_28430 PF02027 RolB/RolC glucosidase family F3X89_28435 PF01380 SIS domain F3X89_28440 PF00300 Histidine phosphatase superfamily (branch 1) F3X89_28440 PF00106 short chain dehydrogenase F3X89_28445 PF00557 Metallopeptidase family M24 F3X89_28445 PF01321 Creatinase/Prolidase N-terminal domain F3X89_28455 PF00248 Aldo/keto reductase family F3X89_28465 PF00106 short chain dehydrogenase F3X89_28480 PF00294 pfkB family carbohydrate kinase F3X89_28485 PF00557 Metallopeptidase family M24 F3X89_28485 PF01321 Creatinase/Prolidase N-terminal domain F3X89_28490 PF08402 TOBE domain F3X89_28490 PF00005 ABC transporter F3X89_28505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_28505 PF00672 HAMP domain F3X89_28525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase F3X89_28525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain F3X89_28530 PF03450 CO dehydrogenase flavoprotein C-terminal domain F3X89_28530 PF00941 FAD binding domain in molybdopterin dehydrogenase F3X89_28535 PF01799 [2Fe-2S] binding domain F3X89_28535 PF00111 2Fe-2S iron-sulfur cluster binding domain F3X89_28540 PF07690 Major Facilitator Superfamily F3X89_28565 PF03466 LysR substrate binding domain F3X89_28565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_28580 PF00107 Zinc-binding dehydrogenase F3X89_28580 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_28590 PF03358 NADPH-dependent FMN reductase F3X89_28595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3X89_28595 PF03466 LysR substrate binding domain F3X89_28600 PF00106 short chain dehydrogenase F3X89_28605 PF00550 Phosphopantetheine attachment site F3X89_28605 PF16197 Ketoacyl-synthetase C-terminal extension F3X89_28605 PF08990 Erythronolide synthase docking F3X89_28605 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_28605 PF00698 Acyl transferase domain F3X89_28605 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_28605 PF14765 Polyketide synthase dehydratase F3X89_28605 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_28605 PF08659 KR domain F3X89_28615 PF00109 Beta-ketoacyl synthase, N-terminal domain F3X89_28615 PF00698 Acyl transferase domain F3X89_28615 PF08240 Alcohol dehydrogenase GroES-like domain F3X89_28615 PF14765 Polyketide synthase dehydratase F3X89_28615 PF00550 Phosphopantetheine attachment site F3X89_28615 PF02801 Beta-ketoacyl synthase, C-terminal domain F3X89_28615 PF16197 Ketoacyl-synthetase C-terminal extension F3X89_28615 PF08659 KR domain F3X89_28615 PF00107 Zinc-binding dehydrogenase F3X89_28640 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F3X89_28645 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F3X89_28655 PF01425 Amidase F3X89_28665 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_28670 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_28670 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_28675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_28675 PF00005 ABC transporter F3X89_28680 PF08220 DeoR-like helix-turn-helix domain F3X89_28680 PF00455 DeoR C terminal sensor domain F3X89_28685 PF01546 Peptidase family M20/M25/M40 F3X89_28700 PF00459 Inositol monophosphatase family F3X89_28705 PF00480 ROK family F3X89_28715 PF13407 Periplasmic binding protein domain F3X89_28720 PF00005 ABC transporter F3X89_28725 PF02653 Branched-chain amino acid transport system / permease component F3X89_28740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3X89_28740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3X89_28745 PF01266 FAD dependent oxidoreductase F3X89_28745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3X89_28750 PF13193 AMP-binding enzyme C-terminal domain F3X89_28750 PF00501 AMP-binding enzyme F3X89_28750 PF16177 Acetyl-coenzyme A synthetase N-terminus F3X89_28760 PF00672 HAMP domain F3X89_28760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_28765 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F3X89_28770 PF01116 Fructose-bisphosphate aldolase class-II F3X89_28775 PF00121 Triosephosphate isomerase F3X89_28785 PF14525 AraC-binding-like domain F3X89_28785 PF12833 Helix-turn-helix domain F3X89_28820 PF17762 HTH domain found in ParB protein F3X89_28820 PF02195 ParB-like nuclease domain F3X89_28860 PF18818 Metallopeptidase superfamily domain F3X89_28860 PF08401 Domain of unknown function (DUF1738) F3X89_28865 PF02261 Aspartate decarboxylase F3X89_28875 PF05284 Protein of unknown function (DUF736) F3X89_28880 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system F3X89_28900 PF05284 Protein of unknown function (DUF736) F3X89_28905 PF05406 WGR domain F3X89_28915 PF13407 Periplasmic binding protein domain F3X89_28920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3X89_28920 PF00672 HAMP domain F3X89_28925 PF01443 Viral (Superfamily 1) RNA helicase F3X89_28925 PF03389 MobA/MobL family F3X89_28925 PF17841 BID domain of Bartonella effector protein (Bep) F3X89_28930 PF02534 Type IV secretory system Conjugative DNA transfer F3X89_28935 PF06412 Conjugal transfer protein TraD F3X89_28940 PF07820 TraC-like protein F3X89_28945 PF01443 Viral (Superfamily 1) RNA helicase F3X89_28945 PF03389 MobA/MobL family F3X89_28945 PF17841 BID domain of Bartonella effector protein (Bep) F3X89_28950 PF10502 Signal peptidase, peptidase S26 F3X89_28955 PF00795 Carbon-nitrogen hydrolase F3X89_28960 PF06871 TraH_2 F3X89_28975 PF01381 Helix-turn-helix F3X89_28980 PF09228 Prokaryotic Transcriptional repressor TraM F3X89_28985 PF00196 Bacterial regulatory proteins, luxR family F3X89_28985 PF03472 Autoinducer binding domain F3X89_28990 PF03743 Bacterial conjugation TrbI-like protein F3X89_28995 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F3X89_29000 PF03524 Conjugal transfer protein F3X89_29005 PF04335 VirB8 protein F3X89_29010 PF04610 TrbL/VirB6 plasmid conjugal transfer protein F3X89_29030 PF05101 Type IV secretory pathway, VirB3-like protein F3X89_29035 PF04956 TrbC/VIRB2 family F3X89_29040 PF00437 Type II/IV secretion system protein F3X89_29045 PF00765 Autoinducer synthase F3X89_29050 PF13614 AAA domain F3X89_29055 PF07506 RepB plasmid partitioning protein F3X89_29055 PF02195 ParB-like nuclease domain F3X89_29060 PF03428 Replication protein C N-terminal domain F3X89_29060 PF11800 Replication protein C C-terminal region F3X89_29065 PF01527 Transposase F3X89_29090 PF00589 Phage integrase family F3X89_29100 PF04079 Segregation and condensation complex subunit ScpB F3X89_29155 PF00067 Cytochrome P450 F3X89_29160 PF00067 Cytochrome P450 F3X89_29170 PF06903 VirK protein F3X89_29215 PF07508 Recombinase F3X89_29215 PF00239 Resolvase, N terminal domain F3X89_29215 PF13408 Recombinase zinc beta ribbon domain F3X89_29225 PF05717 IS66 Orf2 like protein F3X89_29230 PF01527 Transposase F3X89_29250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3X89_29250 PF00512 His Kinase A (phospho-acceptor) domain F3X89_29265 PF01464 Transglycosylase SLT domain F3X89_29270 PF04956 TrbC/VIRB2 family F3X89_29275 PF05101 Type IV secretory pathway, VirB3-like protein F3X89_29280 PF03135 CagE, TrbE, VirB family, component of type IV transporter system F3X89_29290 PF04610 TrbL/VirB6 plasmid conjugal transfer protein F3X89_29295 PF17413 Outer membrane lipoprotein virB7 F3X89_29300 PF04335 VirB8 protein F3X89_29305 PF03524 Conjugal transfer protein F3X89_29310 PF03743 Bacterial conjugation TrbI-like protein F3X89_29315 PF00437 Type II/IV secretion system protein F3X89_29320 PF00486 Transcriptional regulatory protein, C terminal F3X89_29320 PF00072 Response regulator receiver domain F3X89_29325 PF07181 VirC2 protein F3X89_29330 PF07015 VirC1 protein F3X89_29335 PF07328 T-DNA border endonuclease VirD1 F3X89_29340 PF03432 Relaxase/Mobilisation nuclease domain F3X89_29350 PF02534 Type IV secretory system Conjugative DNA transfer F3X89_29380 PF00455 DeoR C terminal sensor domain F3X89_29380 PF08220 DeoR-like helix-turn-helix domain F3X89_29385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3X89_29390 PF00005 ABC transporter F3X89_29390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_29395 PF00005 ABC transporter F3X89_29395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3X89_29400 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_29405 PF12911 N-terminal TM domain of oligopeptide transport permease C F3X89_29405 PF00528 Binding-protein-dependent transport system inner membrane component F3X89_29410 PF03009 Glycerophosphoryl diester phosphodiesterase family F3X89_29415 PF00459 Inositol monophosphatase family F3X89_29430 PF02530 Porin subfamily