locus-tag class description EYD00_00010 PF06969 HemN C-terminal domain EYD00_00010 PF04055 Radical SAM superfamily EYD00_00015 PF01725 Ham1 family EYD00_00020 PF01138 3' exoribonuclease family, domain 1 EYD00_00020 PF03725 3' exoribonuclease family, domain 2 EYD00_00025 PF01628 HrcA protein C terminal domain EYD00_00030 PF01025 GrpE EYD00_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EYD00_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EYD00_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EYD00_00045 PF04552 Sigma-54, DNA binding domain EYD00_00045 PF04963 Sigma-54 factor, core binding domain EYD00_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) EYD00_00050 PF00005 ABC transporter EYD00_00055 PF03968 OstA-like protein EYD00_00065 PF01343 Peptidase family S49 EYD00_00070 PF00216 Bacterial DNA-binding protein EYD00_00080 PF10672 S-adenosylmethionine-dependent methyltransferase EYD00_00080 PF01170 Putative RNA methylase family UPF0020 EYD00_00080 PF02926 THUMP domain EYD00_00085 PF00588 SpoU rRNA Methylase family EYD00_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding EYD00_00090 PF01252 Signal peptidase (SPase) II EYD00_00095 PF00672 HAMP domain EYD00_00095 PF01627 Hpt domain EYD00_00095 PF00072 Response regulator receiver domain EYD00_00095 PF00512 His Kinase A (phospho-acceptor) domain EYD00_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EYD00_00105 PF00488 MutS domain V EYD00_00105 PF01624 MutS domain I EYD00_00105 PF05188 MutS domain II EYD00_00105 PF05192 MutS domain III EYD00_00105 PF05190 MutS family domain IV EYD00_00110 PF01909 Nucleotidyltransferase domain EYD00_00110 PF01966 HD domain EYD00_00110 PF08335 GlnD PII-uridylyltransferase EYD00_00110 PF01842 ACT domain EYD00_00115 PF03023 Lipid II flippase MurJ EYD00_00125 PF00579 tRNA synthetases class I (W and Y) EYD00_00135 PF01106 NifU-like domain EYD00_00140 PF00814 Glycoprotease family EYD00_00145 PF13508 Acetyltransferase (GNAT) domain EYD00_00145 PF00583 Acetyltransferase (GNAT) family EYD00_00150 PF01475 Ferric uptake regulator family EYD00_00155 PF01553 Acyltransferase EYD00_00160 PF00919 Uncharacterized protein family UPF0004 EYD00_00160 PF01938 TRAM domain EYD00_00160 PF04055 Radical SAM superfamily EYD00_00165 PF02562 PhoH-like protein EYD00_00170 PF02130 Uncharacterized protein family UPF0054 EYD00_00175 PF03471 Transporter associated domain EYD00_00175 PF00571 CBS domain EYD00_00180 PF00795 Carbon-nitrogen hydrolase EYD00_00185 PF01381 Helix-turn-helix EYD00_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain EYD00_00190 PF02772 S-adenosylmethionine synthetase, central domain EYD00_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain EYD00_00195 PF02390 Putative methyltransferase EYD00_00200 PF00294 pfkB family carbohydrate kinase EYD00_00205 PF02646 RmuC family EYD00_00210 PF01327 Polypeptide deformylase EYD00_00215 PF00551 Formyl transferase EYD00_00215 PF02911 Formyl transferase, C-terminal domain EYD00_00220 PF01416 tRNA pseudouridine synthase EYD00_00230 PF07687 Peptidase dimerisation domain EYD00_00230 PF01546 Peptidase family M20/M25/M40 EYD00_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EYD00_00235 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_00235 PF14602 Hexapeptide repeat of succinyl-transferase EYD00_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_00245 PF00672 HAMP domain EYD00_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase EYD00_00255 PF00011 Hsp20/alpha crystallin family EYD00_00280 PF00696 Amino acid kinase family EYD00_00290 PF01926 50S ribosome-binding GTPase EYD00_00295 PF02096 60Kd inner membrane protein EYD00_00295 PF14849 YidC periplasmic domain EYD00_00300 PF00825 Ribonuclease P EYD00_00305 PF00468 Ribosomal protein L34 EYD00_00310 PF00672 HAMP domain EYD00_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_00315 PF00512 His Kinase A (phospho-acceptor) domain EYD00_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_00325 PF01209 ubiE/COQ5 methyltransferase family EYD00_00330 PF00005 ABC transporter EYD00_00335 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_00340 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_00350 PF00149 Calcineurin-like phosphoesterase EYD00_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EYD00_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EYD00_00365 PF05544 Proline racemase EYD00_00370 PF01979 Amidohydrolase family EYD00_00375 PF00156 Phosphoribosyl transferase domain EYD00_00380 PF00294 pfkB family carbohydrate kinase EYD00_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYD00_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYD00_00400 PF00342 Phosphoglucose isomerase EYD00_00405 PF13193 AMP-binding enzyme C-terminal domain EYD00_00405 PF00501 AMP-binding enzyme EYD00_00410 PF08402 TOBE domain EYD00_00410 PF00005 ABC transporter EYD00_00420 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_00425 PF07715 TonB-dependent Receptor Plug Domain EYD00_00425 PF00593 TonB dependent receptor EYD00_00445 PF01679 Proteolipid membrane potential modulator EYD00_00465 PF03976 Polyphosphate kinase 2 (PPK2) EYD00_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_00470 PF16736 Single Cache-like EYD00_00470 PF00512 His Kinase A (phospho-acceptor) domain EYD00_00470 PF00989 PAS fold EYD00_00475 PF12849 PBP superfamily domain EYD00_00480 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_00485 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_00490 PF00005 ABC transporter EYD00_00495 PF01895 PhoU domain EYD00_00500 PF00486 Transcriptional regulatory protein, C terminal EYD00_00500 PF00072 Response regulator receiver domain EYD00_00515 PF00202 Aminotransferase class-III EYD00_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYD00_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYD00_00525 PF01430 Hsp33 protein EYD00_00530 PF04379 ApaG domain EYD00_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme EYD00_00540 PF00692 dUTPase EYD00_00550 PF00230 Major intrinsic protein EYD00_00580 PF01522 Polysaccharide deacetylase EYD00_00590 PF00072 Response regulator receiver domain EYD00_00590 PF00196 Bacterial regulatory proteins, luxR family EYD00_00600 PF01180 Dihydroorotate dehydrogenase EYD00_00635 PF02082 Transcriptional regulator EYD00_00640 PF00270 DEAD/DEAH box helicase EYD00_00640 PF00271 Helicase conserved C-terminal domain EYD00_00640 PF08494 DEAD/H associated EYD00_00660 PF01925 Sulfite exporter TauE/SafE EYD00_00675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_00675 PF12806 Acetyl-CoA dehydrogenase C-terminal like EYD00_00675 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_00675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_00680 PF00108 Thiolase, N-terminal domain EYD00_00680 PF02803 Thiolase, C-terminal domain EYD00_00685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EYD00_00685 PF00378 Enoyl-CoA hydratase/isomerase EYD00_00685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EYD00_00705 PF03334 Na+/H+ antiporter subunit EYD00_00710 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EYD00_00715 PF01899 Na+/H+ ion antiporter subunit EYD00_00720 PF00361 Proton-conducting membrane transporter EYD00_00725 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EYD00_00730 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EYD00_00730 PF13244 Domain of unknown function (DUF4040) EYD00_00730 PF00361 Proton-conducting membrane transporter EYD00_00730 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EYD00_00740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_00755 PF01584 CheW-like domain EYD00_00755 PF02895 Signal transducing histidine kinase, homodimeric domain EYD00_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_00755 PF01627 Hpt domain EYD00_00760 PF03705 CheR methyltransferase, all-alpha domain EYD00_00760 PF01739 CheR methyltransferase, SAM binding domain EYD00_00765 PF01339 CheB methylesterase EYD00_00765 PF00072 Response regulator receiver domain EYD00_00770 PF00072 Response regulator receiver domain EYD00_00775 PF03975 CheD chemotactic sensory transduction EYD00_00785 PF08345 Flagellar M-ring protein C-terminal EYD00_00785 PF01514 Secretory protein of YscJ/FliF family EYD00_00790 PF00196 Bacterial regulatory proteins, luxR family EYD00_00790 PF03472 Autoinducer binding domain EYD00_00800 PF00672 HAMP domain EYD00_00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_00805 PF00072 Response regulator receiver domain EYD00_00805 PF01627 Hpt domain EYD00_00805 PF00512 His Kinase A (phospho-acceptor) domain EYD00_00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_00805 PF00672 HAMP domain EYD00_00810 PF01741 Large-conductance mechanosensitive channel, MscL EYD00_00815 PF00155 Aminotransferase class I and II EYD00_00820 PF01370 NAD dependent epimerase/dehydratase family EYD00_00830 PF03884 DNA gyrase inhibitor YacG EYD00_00835 PF02545 Maf-like protein EYD00_00840 PF01176 Translation initiation factor 1A / IF-1 EYD00_00850 PF06793 Uncharacterised protein family (UPF0262) EYD00_00855 PF00815 Histidinol dehydrogenase EYD00_00865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EYD00_00930 PF00589 Phage integrase family EYD00_00930 PF02899 Phage integrase, N-terminal SAM-like domain EYD00_00935 PF00669 Bacterial flagellin N-terminal helical region EYD00_00935 PF00700 Bacterial flagellin C-terminal helical region EYD00_00940 PF00700 Bacterial flagellin C-terminal helical region EYD00_00940 PF00669 Bacterial flagellin N-terminal helical region EYD00_00950 PF00669 Bacterial flagellin N-terminal helical region EYD00_00950 PF00700 Bacterial flagellin C-terminal helical region EYD00_00955 PF00813 FliP family EYD00_00965 PF02107 Flagellar L-ring protein EYD00_00975 PF02119 Flagellar P-ring protein EYD00_00980 PF13144 Chaperone for flagella basal body P-ring formation EYD00_00985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD00_00985 PF00460 Flagella basal body rod protein EYD00_00990 PF02049 Flagellar hook-basal body complex protein FliE EYD00_00995 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD00_01000 PF00460 Flagella basal body rod protein EYD00_01010 PF18269 T3SS EscN ATPase C-terminal domain EYD00_01010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD00_01015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD00_01015 PF00460 Flagella basal body rod protein EYD00_01025 PF01618 MotA/TolQ/ExbB proton channel family EYD00_01030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYD00_01035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EYD00_01040 PF14842 FliG N-terminal domain EYD00_01040 PF01706 FliG C-terminal domain EYD00_01040 PF14841 FliG middle domain EYD00_01045 PF01312 FlhB HrpN YscU SpaS Family EYD00_01060 PF00700 Bacterial flagellin C-terminal helical region EYD00_01060 PF00669 Bacterial flagellin N-terminal helical region EYD00_01070 PF00691 OmpA family EYD00_01070 PF13677 Membrane MotB of proton-channel complex MotA/MotB EYD00_01080 PF02120 Flagellar hook-length control protein FliK EYD00_01090 PF00486 Transcriptional regulatory protein, C terminal EYD00_01095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EYD00_01095 PF00460 Flagella basal body rod protein EYD00_01095 PF07559 Flagellar basal body protein FlaE EYD00_01115 PF07378 Flagellar protein FlbT EYD00_01120 PF03963 Flagellar hook capping protein - N-terminal region EYD00_01125 PF01313 Bacterial export proteins, family 3 EYD00_01130 PF00771 FHIPEP family EYD00_01135 PF01311 Bacterial export proteins, family 1 EYD00_01170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EYD00_01170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EYD00_01175 PF00356 Bacterial regulatory proteins, lacI family EYD00_01180 PF01547 Bacterial extracellular solute-binding protein EYD00_01185 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_01190 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_01195 PF00128 Alpha amylase, catalytic domain EYD00_01200 PF00005 ABC transporter EYD00_01200 PF17912 MalK OB fold domain EYD00_01200 PF03459 TOBE domain EYD00_01215 PF00920 Dehydratase family EYD00_01220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EYD00_01225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EYD00_01225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EYD00_01230 PF01266 FAD dependent oxidoreductase EYD00_01235 PF00120 Glutamine synthetase, catalytic domain EYD00_01265 PF00463 Isocitrate lyase family EYD00_01270 PF06114 IrrE N-terminal-like domain EYD00_01270 PF09856 Predicted transcriptional regulator (DUF2083) EYD00_01270 PF01381 Helix-turn-helix EYD00_01275 PF13416 Bacterial extracellular solute-binding protein EYD00_01280 PF00005 ABC transporter EYD00_01280 PF08402 TOBE domain EYD00_01285 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_01290 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_01300 PF13426 PAS domain EYD00_01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_01300 PF00512 His Kinase A (phospho-acceptor) domain EYD00_01300 PF00989 PAS fold EYD00_01300 PF13188 PAS domain EYD00_01310 PF02541 Ppx/GppA phosphatase family EYD00_01315 PF01728 FtsJ-like methyltransferase EYD00_01320 PF07690 Major Facilitator Superfamily EYD00_01325 PF00753 Metallo-beta-lactamase superfamily EYD00_01335 PF00571 CBS domain EYD00_01335 PF00478 IMP dehydrogenase / GMP reductase domain EYD00_01345 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_01345 PF00107 Zinc-binding dehydrogenase EYD00_01350 PF01738 Dienelactone hydrolase family EYD00_01355 PF00994 Probable molybdopterin binding domain EYD00_01360 PF00288 GHMP kinases N terminal domain EYD00_01360 PF08544 GHMP kinases C terminal EYD00_01370 PF00348 Polyprenyl synthetase EYD00_01380 PF02527 rRNA small subunit methyltransferase G EYD00_01385 PF01343 Peptidase family S49 EYD00_01385 PF06965 Na+/H+ antiporter 1 EYD00_01395 PF01757 Acyltransferase family EYD00_01400 PF02091 Glycyl-tRNA synthetase alpha subunit EYD00_01410 PF04011 LemA family EYD00_01415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EYD00_01425 PF05746 DALR anticodon binding domain EYD00_01425 PF02092 Glycyl-tRNA synthetase beta subunit EYD00_01435 PF04463 Protein of unknown function (DUF523) EYD00_01440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_01440 PF00672 HAMP domain EYD00_01450 PF02843 Phosphoribosylglycinamide synthetase, C domain EYD00_01450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EYD00_01450 PF02844 Phosphoribosylglycinamide synthetase, N domain EYD00_01455 PF17674 HHH domain EYD00_01455 PF00575 S1 RNA binding domain EYD00_01455 PF09371 Tex-like protein N-terminal domain EYD00_01455 PF16921 Tex protein YqgF-like domain EYD00_01470 PF01040 UbiA prenyltransferase family EYD00_01485 PF03466 LysR substrate binding domain EYD00_01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_01495 PF04107 Glutamate-cysteine ligase family 2(GCS2) EYD00_01500 PF04452 RNA methyltransferase EYD00_01505 PF01384 Phosphate transporter family EYD00_01520 PF05116 Sucrose-6F-phosphate phosphohydrolase EYD00_01525 PF13439 Glycosyltransferase Family 4 EYD00_01525 PF00534 Glycosyl transferases group 1 EYD00_01530 PF00392 Bacterial regulatory proteins, gntR family EYD00_01530 PF07729 FCD domain EYD00_01540 PF03466 LysR substrate binding domain EYD00_01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_01545 PF01565 FAD binding domain EYD00_01545 PF02913 FAD linked oxidases, C-terminal domain EYD00_01555 PF01565 FAD binding domain EYD00_01560 PF02754 Cysteine-rich domain EYD00_01560 PF13183 4Fe-4S dicluster domain EYD00_01570 PF17969 L,D-transpeptidase C-terminal domain EYD00_01570 PF03734 L,D-transpeptidase catalytic domain EYD00_01575 PF03352 Methyladenine glycosylase EYD00_01585 PF03601 Conserved hypothetical protein 698 EYD00_01590 PF03466 LysR substrate binding domain EYD00_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_01620 PF13393 Histidyl-tRNA synthetase EYD00_01620 PF03129 Anticodon binding domain EYD00_01630 PF13393 Histidyl-tRNA synthetase EYD00_01635 PF01634 ATP phosphoribosyltransferase EYD00_01640 PF07681 DoxX EYD00_01650 PF00118 TCP-1/cpn60 chaperonin family EYD00_01655 PF00166 Chaperonin 10 Kd subunit EYD00_01665 PF06574 FAD synthetase EYD00_01665 PF01687 Riboflavin kinase EYD00_01670 PF00133 tRNA synthetases class I (I, L, M and V) EYD00_01670 PF08264 Anticodon-binding domain of tRNA EYD00_01680 PF14437 MafB19-like deaminase EYD00_01685 PF01479 S4 domain EYD00_01685 PF00849 RNA pseudouridylate synthase EYD00_01695 PF01734 Patatin-like phospholipase EYD00_01700 PF02254 TrkA-N domain EYD00_01700 PF00999 Sodium/hydrogen exchanger family EYD00_01705 PF01523 Putative modulator of DNA gyrase EYD00_01710 PF00459 Inositol monophosphatase family EYD00_01720 PF00534 Glycosyl transferases group 1 EYD00_01720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EYD00_01730 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EYD00_01740 PF08676 MutL C terminal dimerisation domain EYD00_01740 PF01119 DNA mismatch repair protein, C-terminal domain EYD00_01745 PF00072 Response regulator receiver domain EYD00_01745 PF00512 His Kinase A (phospho-acceptor) domain EYD00_01745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_01745 PF09456 RcsC Alpha-Beta-Loop (ABL) EYD00_01750 PF00563 EAL domain EYD00_01750 PF03707 Bacterial signalling protein N terminal repeat EYD00_01750 PF00990 Diguanylate cyclase, GGDEF domain EYD00_01750 PF13188 PAS domain EYD00_01760 PF08450 SMP-30/Gluconolactonase/LRE-like region EYD00_01765 PF01081 KDPG and KHG aldolase EYD00_01770 PF05035 2-keto-3-deoxy-galactonokinase EYD00_01780 PF01614 Bacterial transcriptional regulator EYD00_01780 PF09339 IclR helix-turn-helix domain EYD00_01785 PF03472 Autoinducer binding domain EYD00_01785 PF00196 Bacterial regulatory proteins, luxR family EYD00_01795 PF10609 NUBPL iron-transfer P-loop NTPase EYD00_01800 PF01544 CorA-like Mg2+ transporter protein EYD00_01805 PF02705 K+ potassium transporter EYD00_01815 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter EYD00_01820 PF00119 ATP synthase A chain EYD00_01825 PF00137 ATP synthase subunit C EYD00_01830 PF00430 ATP synthase B/B' CF(0) EYD00_01835 PF00430 ATP synthase B/B' CF(0) EYD00_01840 PF14572 Phosphoribosyl synthetase-associated domain EYD00_01840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EYD00_01845 PF01351 Ribonuclease HII EYD00_01860 PF02913 FAD linked oxidases, C-terminal domain EYD00_01860 PF01565 FAD binding domain EYD00_01865 PF01300 Telomere recombination EYD00_01865 PF03481 Putative GTP-binding controlling metal-binding EYD00_01875 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EYD00_01875 PF00355 Rieske [2Fe-2S] domain EYD00_01880 PF00175 Oxidoreductase NAD-binding domain EYD00_01880 PF00970 Oxidoreductase FAD-binding domain EYD00_01880 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD00_01885 PF07886 BA14K-like protein EYD00_01890 PF07886 BA14K-like protein EYD00_01900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_01900 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_01900 PF12806 Acetyl-CoA dehydrogenase C-terminal like EYD00_01900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_01915 PF05958 tRNA (Uracil-5-)-methyltransferase EYD00_01920 PF01728 FtsJ-like methyltransferase EYD00_01920 PF01479 S4 domain EYD00_01925 PF00672 HAMP domain EYD00_01925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_01935 PF01037 Lrp/AsnC ligand binding domain EYD00_01935 PF13404 AsnC-type helix-turn-helix domain EYD00_01960 PF02780 Transketolase, C-terminal domain EYD00_01960 PF02779 Transketolase, pyrimidine binding domain EYD00_01960 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EYD00_01965 PF05726 Pirin C-terminal cupin domain EYD00_01965 PF02678 Pirin EYD00_01970 PF02609 Exonuclease VII small subunit EYD00_01975 PF00850 Histone deacetylase domain EYD00_01980 PF02632 BioY family EYD00_01985 PF02361 Cobalt transport protein EYD00_01990 PF00005 ABC transporter EYD00_01995 PF06224 Winged helix DNA-binding domain EYD00_02005 PF01264 Chorismate synthase EYD00_02015 PF00300 Histidine phosphatase superfamily (branch 1) EYD00_02025 PF00684 DnaJ central domain EYD00_02025 PF01556 DnaJ C terminal domain EYD00_02025 PF00226 DnaJ domain EYD00_02035 PF01243 Pyridoxamine 5'-phosphate oxidase EYD00_02035 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EYD00_02050 PF13419 Haloacid dehalogenase-like hydrolase EYD00_02060 PF01523 Putative modulator of DNA gyrase EYD00_02070 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EYD00_02070 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EYD00_02075 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD00_02080 PF01040 UbiA prenyltransferase family EYD00_02090 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EYD00_02095 PF00510 Cytochrome c oxidase subunit III EYD00_02105 PF02104 SURF1 family EYD00_02110 PF02401 LytB protein EYD00_02115 PF01636 Phosphotransferase enzyme family EYD00_02120 PF00075 RNase H EYD00_02130 PF00462 Glutaredoxin EYD00_02130 PF08534 Redoxin EYD00_02140 PF02622 Uncharacterized ACR, COG1678 EYD00_02150 PF15887 Putative zinc-binding metallo-peptidase EYD00_02150 PF10005 zinc-ribbon domain EYD00_02155 PF00563 EAL domain EYD00_02155 PF00990 Diguanylate cyclase, GGDEF domain EYD00_02155 PF13188 PAS domain EYD00_02155 PF03707 Bacterial signalling protein N terminal repeat EYD00_02160 PF13302 Acetyltransferase (GNAT) domain EYD00_02165 PF05193 Peptidase M16 inactive domain EYD00_02165 PF00675 Insulinase (Peptidase family M16) EYD00_02170 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_02170 PF14821 Threonine synthase N terminus EYD00_02185 PF13419 Haloacid dehalogenase-like hydrolase EYD00_02190 PF07729 FCD domain EYD00_02190 PF00392 Bacterial regulatory proteins, gntR family EYD00_02210 PF18755 Restriction Enzyme Adenine Methylase Associated EYD00_02210 PF01555 DNA methylase EYD00_02215 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EYD00_02230 PF14815 NUDIX domain EYD00_02230 PF00730 HhH-GPD superfamily base excision DNA repair protein EYD00_02245 PF13462 Thioredoxin EYD00_02250 PF02463 RecF/RecN/SMC N terminal domain EYD00_02255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_02260 PF00391 PEP-utilising enzyme, mobile domain EYD00_02260 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EYD00_02260 PF02896 PEP-utilising enzyme, TIM barrel domain EYD00_02310 PF06039 Malate:quinone oxidoreductase (Mqo) EYD00_02330 PF00009 Elongation factor Tu GTP binding domain EYD00_02335 PF01507 Phosphoadenosine phosphosulfate reductase family EYD00_02340 PF01507 Phosphoadenosine phosphosulfate reductase family EYD00_02345 PF02082 Transcriptional regulator EYD00_02355 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_02360 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_02365 PF00005 ABC transporter EYD00_02365 PF12857 TOBE-like domain EYD00_02380 PF14765 Polyketide synthase dehydratase EYD00_02380 PF00550 Phosphopantetheine attachment site EYD00_02380 PF08659 KR domain EYD00_02380 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_02380 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_02380 PF16197 Ketoacyl-synthetase C-terminal extension EYD00_02380 PF00698 Acyl transferase domain EYD00_02380 PF00107 Zinc-binding dehydrogenase EYD00_02380 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_02385 PF01590 GAF domain EYD00_02385 PF00563 EAL domain EYD00_02385 PF00989 PAS fold EYD00_02385 PF00990 Diguanylate cyclase, GGDEF domain EYD00_02395 PF00440 Bacterial regulatory proteins, tetR family EYD00_02395 PF13977 BetI-type transcriptional repressor, C-terminal EYD00_02400 PF00171 Aldehyde dehydrogenase family EYD00_02410 PF05199 GMC oxidoreductase EYD00_02410 PF00732 GMC oxidoreductase EYD00_02425 PF00654 Voltage gated chloride channel EYD00_02445 PF00043 Glutathione S-transferase, C-terminal domain EYD00_02445 PF02798 Glutathione S-transferase, N-terminal domain EYD00_02455 PF07690 Major Facilitator Superfamily EYD00_02475 PF01068 ATP dependent DNA ligase domain EYD00_02475 PF04679 ATP dependent DNA ligase C terminal region EYD00_02475 PF04675 DNA ligase N terminus EYD00_02490 PF00403 Heavy-metal-associated domain EYD00_02495 PF03734 L,D-transpeptidase catalytic domain EYD00_02495 PF17969 L,D-transpeptidase C-terminal domain EYD00_02500 PF03734 L,D-transpeptidase catalytic domain EYD00_02500 PF17969 L,D-transpeptidase C-terminal domain EYD00_02505 PF01047 MarR family EYD00_02510 PF02566 OsmC-like protein EYD00_02525 PF00005 ABC transporter EYD00_02525 PF12848 ABC transporter EYD00_02560 PF03466 LysR substrate binding domain EYD00_02560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_02565 PF00106 short chain dehydrogenase EYD00_02580 PF05872 Bacterial protein of unknown function (DUF853) EYD00_02590 PF01638 HxlR-like helix-turn-helix EYD00_02595 PF00106 short chain dehydrogenase EYD00_02600 PF12833 Helix-turn-helix domain EYD00_02605 PF01810 LysE type translocator EYD00_02610 PF00248 Aldo/keto reductase family EYD00_02615 PF01062 Bestrophin, RFP-TM, chloride channel EYD00_02620 PF08279 HTH domain EYD00_02620 PF13280 WYL domain EYD00_02640 PF01063 Amino-transferase class IV EYD00_02645 PF00672 HAMP domain EYD00_02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_02645 PF02203 Tar ligand binding domain homologue EYD00_02650 PF03466 LysR substrate binding domain EYD00_02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_02665 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EYD00_02665 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EYD00_02680 PF01810 LysE type translocator EYD00_02685 PF01322 Cytochrome C' EYD00_02690 PF00034 Cytochrome c EYD00_02725 PF09278 MerR, DNA binding EYD00_02725 PF00376 MerR family regulatory protein EYD00_02735 PF02583 Metal-sensitive transcriptional repressor EYD00_02755 PF00005 ABC transporter EYD00_02755 PF00571 CBS domain EYD00_02760 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_02780 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EYD00_02780 PF00326 Prolyl oligopeptidase family EYD00_02790 PF00701 Dihydrodipicolinate synthetase family EYD00_02800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD00_02800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD00_02800 PF02805 Metal binding domain of Ada EYD00_02800 PF12833 Helix-turn-helix domain EYD00_02810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_02825 PF01258 Prokaryotic dksA/traR C4-type zinc finger EYD00_02830 PF03006 Haemolysin-III related EYD00_02840 PF01641 SelR domain EYD00_02850 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EYD00_02855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EYD00_02865 PF01899 Na+/H+ ion antiporter subunit EYD00_02870 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EYD00_02875 PF03334 Na+/H+ antiporter subunit EYD00_02880 PF05443 ROS/MUCR transcriptional regulator protein EYD00_02895 PF02657 Fe-S metabolism associated domain EYD00_02900 PF17264 Family of unknown function (DUF5330) EYD00_02905 PF00512 His Kinase A (phospho-acceptor) domain EYD00_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_02965 PF00912 Transglycosylase EYD00_02965 PF00905 Penicillin binding protein transpeptidase domain EYD00_02970 PF03692 Putative zinc- or iron-chelating domain EYD00_02975 PF00905 Penicillin binding protein transpeptidase domain EYD00_02990 PF00403 Heavy-metal-associated domain EYD00_02995 PF09278 MerR, DNA binding EYD00_02995 PF00376 MerR family regulatory protein EYD00_03015 PF07690 Major Facilitator Superfamily EYD00_03025 PF00251 Glycosyl hydrolases family 32 N-terminal domain EYD00_03025 PF08244 Glycosyl hydrolases family 32 C terminal EYD00_03030 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EYD00_03040 PF13404 AsnC-type helix-turn-helix domain EYD00_03040 PF01037 Lrp/AsnC ligand binding domain EYD00_03080 PF04860 Phage portal protein EYD00_03170 PF00486 Transcriptional regulatory protein, C terminal EYD00_03170 PF00072 Response regulator receiver domain EYD00_03175 PF16527 Two-component sensor protein CpxA, periplasmic domain EYD00_03175 PF00672 HAMP domain EYD00_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_03175 PF00512 His Kinase A (phospho-acceptor) domain EYD00_03190 PF03100 CcmE EYD00_03195 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EYD00_03195 PF01578 Cytochrome C assembly protein EYD00_03200 PF03918 Cytochrome C biogenesis protein EYD00_03205 PF13180 PDZ domain EYD00_03210 PF00072 Response regulator receiver domain EYD00_03210 PF00486 Transcriptional regulatory protein, C terminal EYD00_03215 PF00672 HAMP domain EYD00_03215 PF00512 His Kinase A (phospho-acceptor) domain EYD00_03215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_03225 PF08335 GlnD PII-uridylyltransferase EYD00_03225 PF03710 Glutamate-ammonia ligase adenylyltransferase EYD00_03230 PF00989 PAS fold EYD00_03230 PF00512 His Kinase A (phospho-acceptor) domain EYD00_03230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_03240 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EYD00_03240 PF11940 Domain of unknown function (DUF3458) Ig-like fold EYD00_03240 PF01433 Peptidase family M1 domain EYD00_03245 PF00892 EamA-like transporter family EYD00_03265 PF00012 Hsp70 protein EYD00_03270 PF05231 MASE1 EYD00_03270 PF00990 Diguanylate cyclase, GGDEF domain EYD00_03270 PF08448 PAS fold EYD00_03270 PF13426 PAS domain EYD00_03270 PF00563 EAL domain EYD00_03270 PF08447 PAS fold EYD00_03300 PF00107 Zinc-binding dehydrogenase EYD00_03300 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_03305 PF01638 HxlR-like helix-turn-helix EYD00_03310 PF02673 Bacitracin resistance protein BacA EYD00_03315 PF01769 Divalent cation transporter EYD00_03315 PF00571 CBS domain EYD00_03315 PF03448 MgtE intracellular N domain EYD00_03320 PF07690 Major Facilitator Superfamily EYD00_03325 PF00781 Diacylglycerol kinase catalytic domain EYD00_03330 PF00202 Aminotransferase class-III EYD00_03345 PF09957 Bacterial antitoxin of type II TA system, VapB EYD00_03350 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus EYD00_03350 PF01048 Phosphorylase superfamily EYD00_03375 PF00155 Aminotransferase class I and II EYD00_03385 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_03385 PF14759 Reductase C-terminal EYD00_03390 PF03328 HpcH/HpaI aldolase/citrate lyase family EYD00_03415 PF02530 Porin subfamily EYD00_03420 PF02530 Porin subfamily EYD00_03425 PF14718 Soluble lytic murein transglycosylase L domain EYD00_03425 PF01464 Transglycosylase SLT domain EYD00_03435 PF00701 Dihydrodipicolinate synthetase family EYD00_03440 PF01668 SmpB protein EYD00_03445 PF00672 HAMP domain EYD00_03445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_03455 PF01192 RNA polymerase Rpb6 EYD00_03460 PF02824 TGS domain EYD00_03460 PF04607 Region found in RelA / SpoT proteins EYD00_03460 PF13291 ACT domain EYD00_03480 PF01648 4'-phosphopantetheinyl transferase superfamily EYD00_03485 PF10502 Signal peptidase, peptidase S26 EYD00_03490 PF00035 Double-stranded RNA binding motif EYD00_03490 PF14622 Ribonuclease-III-like EYD00_03495 PF07650 KH domain EYD00_03495 PF01926 50S ribosome-binding GTPase EYD00_03500 PF00027 Cyclic nucleotide-binding domain EYD00_03500 PF13545 Crp-like helix-turn-helix domain EYD00_03505 PF00072 Response regulator receiver domain EYD00_03510 PF02565 Recombination protein O C terminal EYD00_03510 PF11967 Recombination protein O N terminal EYD00_03515 PF07690 Major Facilitator Superfamily EYD00_03520 PF08241 Methyltransferase domain EYD00_03535 PF01966 HD domain EYD00_03545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_03555 PF00005 ABC transporter EYD00_03560 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_03565 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment EYD00_03570 PF05552 Conserved TM helix EYD00_03570 PF00924 Mechanosensitive ion channel EYD00_03580 PF01966 HD domain EYD00_03585 PF01571 Aminomethyltransferase folate-binding domain EYD00_03605 PF00293 NUDIX domain EYD00_03610 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EYD00_03620 PF00990 Diguanylate cyclase, GGDEF domain EYD00_03620 PF00072 Response regulator receiver domain EYD00_03625 PF01066 CDP-alcohol phosphatidyltransferase EYD00_03630 PF02666 Phosphatidylserine decarboxylase EYD00_03635 PF00005 ABC transporter EYD00_03635 PF00664 ABC transporter transmembrane region EYD00_03645 PF03641 Possible lysine decarboxylase EYD00_03650 PF00905 Penicillin binding protein transpeptidase domain EYD00_03650 PF03717 Penicillin-binding Protein dimerisation domain EYD00_03655 PF00892 EamA-like transporter family EYD00_03660 PF00561 alpha/beta hydrolase fold EYD00_03675 PF04480 Protein of unknown function (DUF559) EYD00_03680 PF09190 DALR domain EYD00_03680 PF01406 tRNA synthetases class I (C) catalytic domain EYD00_03685 PF00106 short chain dehydrogenase EYD00_03690 PF00156 Phosphoribosyl transferase domain EYD00_03690 PF13537 Glutamine amidotransferase domain EYD00_03695 PF02674 Colicin V production protein EYD00_03700 PF06745 KaiC EYD00_03700 PF18073 Rubredoxin metal binding domain EYD00_03715 PF00842 Alanine racemase, C-terminal domain EYD00_03715 PF01168 Alanine racemase, N-terminal domain EYD00_03720 PF12833 Helix-turn-helix domain EYD00_03720 PF12852 Cupin EYD00_03725 PF03591 AzlC protein EYD00_03735 PF00772 DnaB-like helicase N terminal domain EYD00_03735 PF03796 DnaB-like helicase C terminal domain EYD00_03750 PF13533 Biotin-lipoyl like EYD00_03755 PF01281 Ribosomal protein L9, N-terminal domain EYD00_03755 PF03948 Ribosomal protein L9, C-terminal domain EYD00_03765 PF01084 Ribosomal protein S18 EYD00_03770 PF01250 Ribosomal protein S6 EYD00_03780 PF00248 Aldo/keto reductase family EYD00_03785 PF00698 Acyl transferase domain EYD00_03795 PF00550 Phosphopantetheine attachment site EYD00_03800 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_03800 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_03805 PF02618 YceG-like family EYD00_03810 PF08340 Domain of unknown function (DUF1732) EYD00_03810 PF03755 YicC-like family, N-terminal region EYD00_03815 PF00625 Guanylate kinase EYD00_03820 PF01738 Dienelactone hydrolase family EYD00_03825 PF00398 Ribosomal RNA adenine dimethylase EYD00_03830 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EYD00_03840 PF04453 LPS transport system D EYD00_03840 PF03968 OstA-like protein EYD00_03855 PF02789 Cytosol aminopeptidase family, N-terminal domain EYD00_03855 PF00883 Cytosol aminopeptidase family, catalytic domain EYD00_03865 PF03707 Bacterial signalling protein N terminal repeat EYD00_03865 PF00990 Diguanylate cyclase, GGDEF domain EYD00_03865 PF00563 EAL domain EYD00_03870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_03875 PF01590 GAF domain EYD00_03875 PF00990 Diguanylate cyclase, GGDEF domain EYD00_03875 PF00360 Phytochrome region EYD00_03875 PF00563 EAL domain EYD00_03880 PF03707 Bacterial signalling protein N terminal repeat EYD00_03880 PF00990 Diguanylate cyclase, GGDEF domain EYD00_03880 PF00563 EAL domain EYD00_03885 PF00512 His Kinase A (phospho-acceptor) domain EYD00_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_03885 PF00989 PAS fold EYD00_03890 PF00072 Response regulator receiver domain EYD00_03890 PF00196 Bacterial regulatory proteins, luxR family EYD00_03900 PF00005 ABC transporter EYD00_03900 PF12848 ABC transporter EYD00_03905 PF17158 Membrane-associated sensor, integral membrane domain EYD00_03905 PF00990 Diguanylate cyclase, GGDEF domain EYD00_03910 PF13417 Glutathione S-transferase, N-terminal domain EYD00_03915 PF00334 Nucleoside diphosphate kinase EYD00_03935 PF02391 MoaE protein EYD00_03945 PF01066 CDP-alcohol phosphatidyltransferase EYD00_03950 PF08459 UvrC Helix-hairpin-helix N-terminal EYD00_03950 PF02151 UvrB/uvrC motif EYD00_03950 PF01541 GIY-YIG catalytic domain EYD00_03960 PF13505 Outer membrane protein beta-barrel domain EYD00_03965 PF13417 Glutathione S-transferase, N-terminal domain EYD00_03965 PF00043 Glutathione S-transferase, C-terminal domain EYD00_03970 PF00445 Ribonuclease T2 family EYD00_03980 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EYD00_03985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD00_03985 PF00384 Molybdopterin oxidoreductase EYD00_03985 PF01568 Molydopterin dinucleotide binding domain EYD00_03990 PF00293 NUDIX domain EYD00_03995 PF00293 NUDIX domain EYD00_04010 PF00551 Formyl transferase EYD00_04015 PF02769 AIR synthase related protein, C-terminal domain EYD00_04015 PF00586 AIR synthase related protein, N-terminal domain EYD00_04020 PF01594 AI-2E family transporter EYD00_04030 PF13089 Polyphosphate kinase N-terminal domain EYD00_04030 PF02503 Polyphosphate kinase middle domain EYD00_04030 PF17941 Polyphosphate kinase C-terminal domain 1 EYD00_04030 PF13090 Polyphosphate kinase C-terminal domain 2 EYD00_04035 PF02541 Ppx/GppA phosphatase family EYD00_04040 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_04060 PF00211 Adenylate and Guanylate cyclase catalytic domain EYD00_04065 PF01612 3'-5' exonuclease EYD00_04065 PF00570 HRDC domain EYD00_04070 PF07690 Major Facilitator Superfamily EYD00_04075 PF02938 GAD domain EYD00_04075 PF00152 tRNA synthetases class II (D, K and N) EYD00_04075 PF01336 OB-fold nucleic acid binding domain EYD00_04085 PF06123 Inner membrane protein CreD EYD00_04095 PF00521 DNA gyrase/topoisomerase IV, subunit A EYD00_04095 PF03989 DNA gyrase C-terminal domain, beta-propeller EYD00_04100 PF02661 Fic/DOC family EYD00_04110 PF04377 Arginine-tRNA-protein transferase, C terminus EYD00_04110 PF04376 Arginine-tRNA-protein transferase, N terminus EYD00_04120 PF00490 Delta-aminolevulinic acid dehydratase EYD00_04140 PF00464 Serine hydroxymethyltransferase EYD00_04145 PF03477 ATP cone domain EYD00_04150 PF01872 RibD C-terminal domain EYD00_04150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EYD00_04155 PF00677 Lumazine binding domain EYD00_04160 PF01810 LysE type translocator EYD00_04165 PF00885 6,7-dimethyl-8-ribityllumazine synthase EYD00_04170 PF01029 NusB family EYD00_04175 PF07690 Major Facilitator Superfamily EYD00_04180 PF03030 Inorganic H+ pyrophosphatase EYD00_04200 PF02504 Fatty acid synthesis protein EYD00_04205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EYD00_04205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EYD00_04210 PF00216 Bacterial DNA-binding protein EYD00_04215 PF13411 MerR HTH family regulatory protein EYD00_04230 PF00403 Heavy-metal-associated domain EYD00_04240 PF00376 MerR family regulatory protein EYD00_04240 PF09278 MerR, DNA binding EYD00_04245 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_04250 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_04250 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_04255 PF00005 ABC transporter EYD00_04255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_04260 PF00005 ABC transporter EYD00_04260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_04265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_04275 PF02386 Cation transport protein EYD00_04280 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_04280 PF00585 C-terminal regulatory domain of Threonine dehydratase EYD00_04290 PF02525 Flavodoxin-like fold EYD00_04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_04295 PF03466 LysR substrate binding domain EYD00_04330 PF00581 Rhodanese-like domain EYD00_04335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYD00_04335 PF01411 tRNA synthetases class II (A) EYD00_04335 PF02272 DHHA1 domain EYD00_04340 PF00571 CBS domain EYD00_04340 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_04345 PF00875 DNA photolyase EYD00_04345 PF03441 FAD binding domain of DNA photolyase EYD00_04355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD00_04355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD00_04390 PF06055 Exopolysaccharide synthesis, ExoD EYD00_04395 PF09335 SNARE associated Golgi protein EYD00_04440 PF02397 Bacterial sugar transferase EYD00_04445 PF13439 Glycosyltransferase Family 4 EYD00_04445 PF00534 Glycosyl transferases group 1 EYD00_04470 PF02628 Cytochrome oxidase assembly protein EYD00_04475 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase EYD00_04480 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYD00_04485 PF00491 Arginase family EYD00_04490 PF00380 Ribosomal protein S9/S16 EYD00_04495 PF00572 Ribosomal protein L13 EYD00_04505 PF13380 CoA binding domain EYD00_04510 PF01053 Cys/Met metabolism PLP-dependent enzyme EYD00_04530 PF00067 Cytochrome P450 EYD00_04535 PF17151 Periplasmic sensor domain EYD00_04535 PF00990 Diguanylate cyclase, GGDEF domain EYD00_04540 PF00574 Clp protease EYD00_04545 PF06689 ClpX C4-type zinc finger EYD00_04545 PF10431 C-terminal, D2-small domain, of ClpB protein EYD00_04545 PF07724 AAA domain (Cdc48 subfamily) EYD00_04555 PF02190 ATP-dependent protease La (LON) substrate-binding domain EYD00_04555 PF05362 Lon protease (S16) C-terminal proteolytic domain EYD00_04555 PF00004 ATPase family associated with various cellular activities (AAA) EYD00_04560 PF00216 Bacterial DNA-binding protein EYD00_04565 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EYD00_04585 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EYD00_04590 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EYD00_04595 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EYD00_04605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EYD00_04620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EYD00_04620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EYD00_04620 PF10531 SLBB domain EYD00_04625 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal EYD00_04625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EYD00_04625 PF00384 Molybdopterin oxidoreductase EYD00_04630 PF00146 NADH dehydrogenase EYD00_04635 PF12838 4Fe-4S dicluster domain EYD00_04640 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EYD00_04645 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EYD00_04650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EYD00_04650 PF00361 Proton-conducting membrane transporter EYD00_04655 PF00361 Proton-conducting membrane transporter EYD00_04655 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus EYD00_04660 PF00361 Proton-conducting membrane transporter EYD00_04665 PF08279 HTH domain EYD00_04665 PF03099 Biotin/lipoate A/B protein ligase family EYD00_04665 PF02237 Biotin protein ligase C terminal domain EYD00_04670 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EYD00_04670 PF12706 Beta-lactamase superfamily domain EYD00_04670 PF17770 Ribonuclease J C-terminal domain EYD00_04685 PF03129 Anticodon binding domain EYD00_04685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYD00_04690 PF12704 MacB-like periplasmic core domain EYD00_04690 PF02687 FtsX-like permease family EYD00_04695 PF00005 ABC transporter EYD00_04705 PF02811 PHP domain EYD00_04705 PF14579 Helix-hairpin-helix motif EYD00_04705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EYD00_04705 PF07733 Bacterial DNA polymerase III alpha NTPase domain EYD00_04715 PF11799 impB/mucB/samB family C-terminal domain EYD00_04715 PF00817 impB/mucB/samB family EYD00_04725 PF00072 Response regulator receiver domain EYD00_04730 PF00072 Response regulator receiver domain EYD00_04730 PF00990 Diguanylate cyclase, GGDEF domain EYD00_04735 PF00471 Ribosomal protein L33 EYD00_04740 PF07690 Major Facilitator Superfamily EYD00_04755 PF08206 Ribonuclease B OB domain EYD00_04755 PF08461 Ribonuclease R winged-helix domain EYD00_04755 PF00773 RNB domain EYD00_04755 PF00575 S1 RNA binding domain EYD00_04755 PF17876 Cold shock domain EYD00_04760 PF01751 Toprim domain EYD00_04760 PF01131 DNA topoisomerase EYD00_04760 PF01396 Topoisomerase DNA binding C4 zinc finger EYD00_04760 PF13368 Topoisomerase C-terminal repeat EYD00_04770 PF17782 DprA winged helix domain EYD00_04770 PF02481 DNA recombination-mediator protein A EYD00_04775 PF02660 Glycerol-3-phosphate acyltransferase EYD00_04780 PF01979 Amidohydrolase family EYD00_04785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EYD00_04785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EYD00_04790 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_04790 PF18158 Adaptive response protein AidB N-terminal domain EYD00_04790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_04795 PF00583 Acetyltransferase (GNAT) family EYD00_04810 PF03652 Holliday junction resolvase EYD00_04815 PF08274 PhnA Zinc-Ribbon EYD00_04815 PF03831 PhnA domain EYD00_04825 PF02686 Glu-tRNAGln amidotransferase C subunit EYD00_04830 PF01425 Amidase EYD00_04835 PF00583 Acetyltransferase (GNAT) family EYD00_04835 PF13673 Acetyltransferase (GNAT) domain EYD00_04840 PF09857 Putative toxin of bacterial toxin-antitoxin pair EYD00_04855 PF02637 GatB domain EYD00_04855 PF02934 GatB/GatE catalytic domain EYD00_04865 PF00583 Acetyltransferase (GNAT) family EYD00_04880 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EYD00_04885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD00_04885 PF00289 Biotin carboxylase, N-terminal domain EYD00_04885 PF02785 Biotin carboxylase C-terminal domain EYD00_04890 PF00364 Biotin-requiring enzyme EYD00_04895 PF01220 Dehydroquinase class II EYD00_04900 PF13462 Thioredoxin EYD00_04900 PF06965 Na+/H+ antiporter 1 EYD00_04905 PF00155 Aminotransferase class I and II EYD00_04930 PF00575 S1 RNA binding domain EYD00_04930 PF10150 Ribonuclease E/G family EYD00_04930 PF12111 Polyribonucleotide phosphorylase C terminal EYD00_04940 PF01520 N-acetylmuramoyl-L-alanine amidase EYD00_04940 PF11741 AMIN domain EYD00_04945 PF00912 Transglycosylase EYD00_04945 PF17092 Penicillin-binding protein OB-like domain EYD00_04945 PF00905 Penicillin binding protein transpeptidase domain EYD00_04965 PF01513 ATP-NAD kinase EYD00_04970 PF02567 Phenazine biosynthesis-like protein EYD00_04985 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD00_04995 PF00809 Pterin binding enzyme EYD00_05000 PF02152 Dihydroneopterin aldolase EYD00_05005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EYD00_05015 PF05128 Domain of unknown function (DUF697) EYD00_05020 PF04317 YcjX-like family, DUF463 EYD00_05030 PF01258 Prokaryotic dksA/traR C4-type zinc finger EYD00_05045 PF00512 His Kinase A (phospho-acceptor) domain EYD00_05045 PF08448 PAS fold EYD00_05045 PF13188 PAS domain EYD00_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_05045 PF00072 Response regulator receiver domain EYD00_05050 PF02617 ATP-dependent Clp protease adaptor protein ClpS EYD00_05055 PF10431 C-terminal, D2-small domain, of ClpB protein EYD00_05055 PF00004 ATPase family associated with various cellular activities (AAA) EYD00_05055 PF07724 AAA domain (Cdc48 subfamily) EYD00_05055 PF17871 AAA lid domain EYD00_05055 PF02861 Clp amino terminal domain, pathogenicity island component EYD00_05075 PF03466 LysR substrate binding domain EYD00_05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_05085 PF01230 HIT domain EYD00_05110 PF00318 Ribosomal protein S2 EYD00_05115 PF00889 Elongation factor TS EYD00_05120 PF00696 Amino acid kinase family EYD00_05125 PF01765 Ribosome recycling factor EYD00_05130 PF01255 Putative undecaprenyl diphosphate synthase EYD00_05140 PF02163 Peptidase family M50 EYD00_05140 PF17820 PDZ domain EYD00_05145 PF07244 Surface antigen variable number repeat EYD00_05145 PF01103 Surface antigen EYD00_05150 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EYD00_05150 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_05155 PF07977 FabA-like domain EYD00_05160 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_05160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EYD00_05165 PF17930 LpxI N-terminal domain EYD00_05165 PF06230 LpxI C-terminal domain EYD00_05170 PF02684 Lipid-A-disaccharide synthetase EYD00_05175 PF00285 Citrate synthase, C-terminal domain EYD00_05190 PF00717 Peptidase S24-like EYD00_05190 PF01726 LexA DNA binding domain EYD00_05225 PF00793 DAHP synthetase I family EYD00_05230 PF00113 Enolase, C-terminal TIM barrel domain EYD00_05230 PF03952 Enolase, N-terminal domain EYD00_05240 PF00676 Dehydrogenase E1 component EYD00_05245 PF00364 Biotin-requiring enzyme EYD00_05245 PF02780 Transketolase, C-terminal domain EYD00_05245 PF02779 Transketolase, pyrimidine binding domain EYD00_05250 PF00364 Biotin-requiring enzyme EYD00_05250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EYD00_05250 PF02817 e3 binding domain EYD00_05260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD00_05260 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_05270 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EYD00_05270 PF04055 Radical SAM superfamily EYD00_05275 PF00892 EamA-like transporter family EYD00_05295 PF03364 Polyketide cyclase / dehydrase and lipid transport EYD00_05300 PF02464 Competence-damaged protein EYD00_05305 PF02542 YgbB family EYD00_05305 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EYD00_05310 PF01207 Dihydrouridine synthase (Dus) EYD00_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_05315 PF00512 His Kinase A (phospho-acceptor) domain EYD00_05315 PF00989 PAS fold EYD00_05320 PF00158 Sigma-54 interaction domain EYD00_05320 PF00072 Response regulator receiver domain EYD00_05320 PF02954 Bacterial regulatory protein, Fis family EYD00_05325 PF00672 HAMP domain EYD00_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_05325 PF00512 His Kinase A (phospho-acceptor) domain EYD00_05325 PF00989 PAS fold EYD00_05330 PF02954 Bacterial regulatory protein, Fis family EYD00_05330 PF00072 Response regulator receiver domain EYD00_05330 PF00158 Sigma-54 interaction domain EYD00_05335 PF02080 TrkA-C domain EYD00_05335 PF02254 TrkA-N domain EYD00_05340 PF17209 Hfq protein EYD00_05345 PF01926 50S ribosome-binding GTPase EYD00_05345 PF13167 GTP-binding GTPase N-terminal EYD00_05345 PF16360 GTP-binding GTPase Middle Region EYD00_05360 PF13746 4Fe-4S dicluster domain EYD00_05360 PF12801 4Fe-4S binding domain EYD00_05360 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EYD00_05365 PF05751 FixH EYD00_05375 PF03597 Cytochrome oxidase maturation protein cbb3-type EYD00_05380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_05380 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EYD00_05390 PF00248 Aldo/keto reductase family EYD00_05405 PF01297 Zinc-uptake complex component A periplasmic EYD00_05410 PF00005 ABC transporter EYD00_05415 PF00950 ABC 3 transport family EYD00_05425 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_05430 PF01557 Fumarylacetoacetate (FAA) hydrolase family EYD00_05435 PF01207 Dihydrouridine synthase (Dus) EYD00_05445 PF17760 UvrA interaction domain EYD00_05445 PF17755 UvrA DNA-binding domain EYD00_05450 PF00436 Single-strand binding protein family EYD00_05460 PF03448 MgtE intracellular N domain EYD00_05460 PF01769 Divalent cation transporter EYD00_05460 PF00571 CBS domain EYD00_05465 PF01914 MarC family integral membrane protein EYD00_05470 PF00521 DNA gyrase/topoisomerase IV, subunit A EYD00_05470 PF03989 DNA gyrase C-terminal domain, beta-propeller EYD00_05545 PF03354 Phage Terminase EYD00_05580 PF05036 Sporulation related domain EYD00_05580 PF03330 Lytic transglycolase EYD00_05585 PF07943 Penicillin-binding protein 5, C-terminal domain EYD00_05585 PF00768 D-alanyl-D-alanine carboxypeptidase EYD00_05590 PF02223 Thymidylate kinase EYD00_05595 PF09115 DNA polymerase III, delta subunit, C terminal EYD00_05600 PF09334 tRNA synthetases class I (M) EYD00_05600 PF08264 Anticodon-binding domain of tRNA EYD00_05605 PF01026 TatD related DNase EYD00_05610 PF03099 Biotin/lipoate A/B protein ligase family EYD00_05610 PF12706 Beta-lactamase superfamily domain EYD00_05615 PF00654 Voltage gated chloride channel EYD00_05640 PF00043 Glutathione S-transferase, C-terminal domain EYD00_05640 PF02798 Glutathione S-transferase, N-terminal domain EYD00_05645 PF10417 C-terminal domain of 1-Cys peroxiredoxin EYD00_05645 PF00578 AhpC/TSA family EYD00_05655 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EYD00_05665 PF00756 Putative esterase EYD00_05670 PF01042 Endoribonuclease L-PSP EYD00_05685 PF13419 Haloacid dehalogenase-like hydrolase EYD00_05690 PF00849 RNA pseudouridylate synthase EYD00_05690 PF01479 S4 domain EYD00_05695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EYD00_05720 PF08669 Glycine cleavage T-protein C-terminal barrel domain EYD00_05720 PF01571 Aminomethyltransferase folate-binding domain EYD00_05725 PF01597 Glycine cleavage H-protein EYD00_05730 PF02347 Glycine cleavage system P-protein EYD00_05735 PF02469 Fasciclin domain EYD00_05755 PF00970 Oxidoreductase FAD-binding domain EYD00_05755 PF00175 Oxidoreductase NAD-binding domain EYD00_05775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_05775 PF10414 Sirohaem synthase dimerisation region EYD00_05775 PF14824 Sirohaem biosynthesis protein central EYD00_05790 PF03819 MazG nucleotide pyrophosphohydrolase domain EYD00_05795 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EYD00_05795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EYD00_05810 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD00_05815 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EYD00_05830 PF00376 MerR family regulatory protein EYD00_05830 PF09278 MerR, DNA binding EYD00_05835 PF03448 MgtE intracellular N domain EYD00_05835 PF01769 Divalent cation transporter EYD00_05835 PF00571 CBS domain EYD00_05840 PF00384 Molybdopterin oxidoreductase EYD00_05850 PF01327 Polypeptide deformylase EYD00_05865 PF00512 His Kinase A (phospho-acceptor) domain EYD00_05865 PF00989 PAS fold EYD00_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_05875 PF03099 Biotin/lipoate A/B protein ligase family EYD00_05880 PF00107 Zinc-binding dehydrogenase EYD00_05880 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_05905 PF02355 Protein export membrane protein EYD00_05905 PF07549 SecD/SecF GG Motif EYD00_05910 PF02699 Preprotein translocase subunit EYD00_05920 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_05920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EYD00_05930 PF00067 Cytochrome P450 EYD00_05940 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_05940 PF06426 Serine acetyltransferase, N-terminal EYD00_05945 PF00561 alpha/beta hydrolase fold EYD00_05955 PF01494 FAD binding domain EYD00_05960 PF01053 Cys/Met metabolism PLP-dependent enzyme EYD00_05965 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_05970 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_05975 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_05980 PF00005 ABC transporter EYD00_05995 PF02272 DHHA1 domain EYD00_05995 PF17768 RecJ OB domain EYD00_05995 PF01368 DHH family EYD00_06005 PF00742 Homoserine dehydrogenase EYD00_06005 PF01842 ACT domain EYD00_06005 PF03447 Homoserine dehydrogenase, NAD binding domain EYD00_06010 PF00155 Aminotransferase class I and II EYD00_06015 PF01156 Inosine-uridine preferring nucleoside hydrolase EYD00_06020 PF01925 Sulfite exporter TauE/SafE EYD00_06035 PF00107 Zinc-binding dehydrogenase EYD00_06035 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_06040 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_06040 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_06050 PF07977 FabA-like domain EYD00_06055 PF00550 Phosphopantetheine attachment site EYD00_06060 PF04055 Radical SAM superfamily EYD00_06065 PF13545 Crp-like helix-turn-helix domain EYD00_06065 PF00027 Cyclic nucleotide-binding domain EYD00_06075 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EYD00_06085 PF03749 Sugar fermentation stimulation protein RE domain EYD00_06085 PF17746 SfsA N-terminal OB domain EYD00_06090 PF00557 Metallopeptidase family M24 EYD00_06095 PF04002 RadC-like JAB domain EYD00_06110 PF01474 Class-II DAHP synthetase family EYD00_06125 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_06125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD00_06135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EYD00_06140 PF13419 Haloacid dehalogenase-like hydrolase EYD00_06160 PF10415 Fumarase C C-terminus EYD00_06160 PF00206 Lyase EYD00_06165 PF06418 CTP synthase N-terminus EYD00_06165 PF00117 Glutamine amidotransferase class-I EYD00_06170 PF03840 Preprotein translocase SecG subunit EYD00_06175 PF00121 Triosephosphate isomerase EYD00_06185 PF00986 DNA gyrase B subunit, carboxyl terminus EYD00_06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_06185 PF01751 Toprim domain EYD00_06185 PF00204 DNA gyrase B EYD00_06190 PF00574 Clp protease EYD00_06200 PF01022 Bacterial regulatory protein, arsR family EYD00_06205 PF13091 PLD-like domain EYD00_06210 PF00072 Response regulator receiver domain EYD00_06215 PF01571 Aminomethyltransferase folate-binding domain EYD00_06215 PF08669 Glycine cleavage T-protein C-terminal barrel domain EYD00_06215 PF16350 FAD dependent oxidoreductase central domain EYD00_06215 PF01266 FAD dependent oxidoreductase EYD00_06220 PF00924 Mechanosensitive ion channel EYD00_06220 PF12794 Mechanosensitive ion channel inner membrane domain 1 EYD00_06220 PF12795 Mechanosensitive ion channel porin domain EYD00_06280 PF00005 ABC transporter EYD00_06285 PF02405 Permease MlaE EYD00_06290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_06290 PF13378 Enolase C-terminal domain-like EYD00_06300 PF03949 Malic enzyme, NAD binding domain EYD00_06300 PF01515 Phosphate acetyl/butaryl transferase EYD00_06300 PF00390 Malic enzyme, N-terminal domain EYD00_06315 PF00881 Nitroreductase family EYD00_06320 PF07676 WD40-like Beta Propeller Repeat EYD00_06330 PF02540 NAD synthase EYD00_06330 PF00795 Carbon-nitrogen hydrolase EYD00_06335 PF00884 Sulfatase EYD00_06350 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_06350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD00_06365 PF05697 Bacterial trigger factor protein (TF) EYD00_06365 PF05698 Bacterial trigger factor protein (TF) C-terminus EYD00_06365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EYD00_06390 PF01134 Glucose inhibited division protein A EYD00_06410 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_06410 PF00107 Zinc-binding dehydrogenase EYD00_06420 PF00550 Phosphopantetheine attachment site EYD00_06425 PF00975 Thioesterase domain EYD00_06425 PF13193 AMP-binding enzyme C-terminal domain EYD00_06425 PF00668 Condensation domain EYD00_06425 PF00550 Phosphopantetheine attachment site EYD00_06425 PF00501 AMP-binding enzyme EYD00_06430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYD00_06430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYD00_06435 PF04715 Anthranilate synthase component I, N terminal region EYD00_06435 PF00425 chorismate binding enzyme EYD00_06435 PF00117 Glutamine amidotransferase class-I EYD00_06440 PF01702 Queuine tRNA-ribosyltransferase EYD00_06445 PF02547 Queuosine biosynthesis protein EYD00_06450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EYD00_06455 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EYD00_06460 PF01467 Cytidylyltransferase-like EYD00_06485 PF02885 Glycosyl transferase family, helical bundle domain EYD00_06485 PF00591 Glycosyl transferase family, a/b domain EYD00_06490 PF00218 Indole-3-glycerol phosphate synthase EYD00_06495 PF01967 MoaC family EYD00_06500 PF03454 MoeA C-terminal region (domain IV) EYD00_06500 PF03453 MoeA N-terminal region (domain I and II) EYD00_06500 PF00994 Probable molybdopterin binding domain EYD00_06505 PF17158 Membrane-associated sensor, integral membrane domain EYD00_06505 PF00990 Diguanylate cyclase, GGDEF domain EYD00_06515 PF00999 Sodium/hydrogen exchanger family EYD00_06515 PF02254 TrkA-N domain EYD00_06525 PF04055 Radical SAM superfamily EYD00_06525 PF06463 Molybdenum Cofactor Synthesis C EYD00_06530 PF00892 EamA-like transporter family EYD00_06535 PF07690 Major Facilitator Superfamily EYD00_06540 PF12804 MobA-like NTP transferase domain EYD00_06545 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EYD00_06550 PF01551 Peptidase family M23 EYD00_06560 PF01975 Survival protein SurE EYD00_06565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYD00_06565 PF02403 Seryl-tRNA synthetase N-terminal domain EYD00_06570 PF00902 Sec-independent protein translocase protein (TatC) EYD00_06575 PF02416 mttA/Hcf106 family EYD00_06580 PF02416 mttA/Hcf106 family EYD00_06585 PF04079 Segregation and condensation complex subunit ScpB EYD00_06590 PF02616 Segregation and condensation protein ScpA EYD00_06595 PF00933 Glycosyl hydrolase family 3 N terminal domain EYD00_06605 PF00750 tRNA synthetases class I (R) EYD00_06605 PF05746 DALR anticodon binding domain EYD00_06605 PF03485 Arginyl tRNA synthetase N terminal domain EYD00_06610 PF13286 Phosphohydrolase-associated domain EYD00_06610 PF01966 HD domain EYD00_06615 PF01521 Iron-sulphur cluster biosynthesis EYD00_06625 PF08238 Sel1 repeat EYD00_06645 PF00133 tRNA synthetases class I (I, L, M and V) EYD00_06645 PF08264 Anticodon-binding domain of tRNA EYD00_06645 PF10458 Valyl tRNA synthetase tRNA binding arm EYD00_06690 PF03358 NADPH-dependent FMN reductase EYD00_06695 PF02464 Competence-damaged protein EYD00_06695 PF18146 Damage-inducible protein CinA KH domain EYD00_06695 PF00994 Probable molybdopterin binding domain EYD00_06700 PF00582 Universal stress protein family EYD00_06705 PF00156 Phosphoribosyl transferase domain EYD00_06715 PF02867 Ribonucleotide reductase, barrel domain EYD00_06715 PF08471 Class II vitamin B12-dependent ribonucleotide reductase EYD00_06730 PF01566 Natural resistance-associated macrophage protein EYD00_06745 PF00005 ABC transporter EYD00_06745 PF00664 ABC transporter transmembrane region EYD00_06750 PF01594 AI-2E family transporter EYD00_06755 PF00583 Acetyltransferase (GNAT) family EYD00_06790 PF03129 Anticodon binding domain EYD00_06790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EYD00_06790 PF02824 TGS domain EYD00_06790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYD00_06800 PF01809 Putative membrane protein insertion efficiency factor EYD00_06810 PF01227 GTP cyclohydrolase I EYD00_06815 PF01502 Phosphoribosyl-AMP cyclohydrolase EYD00_06820 PF01734 Patatin-like phospholipase EYD00_06825 PF00571 CBS domain EYD00_06825 PF00478 IMP dehydrogenase / GMP reductase domain EYD00_06860 PF03315 Serine dehydratase beta chain EYD00_06860 PF03313 Serine dehydratase alpha chain EYD00_06895 PF03466 LysR substrate binding domain EYD00_06895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_06905 PF12833 Helix-turn-helix domain EYD00_06905 PF01965 DJ-1/PfpI family EYD00_06910 PF03853 YjeF-related protein N-terminus EYD00_06910 PF01256 Carbohydrate kinase EYD00_06915 PF00543 Nitrogen regulatory protein P-II EYD00_06920 PF03951 Glutamine synthetase, beta-Grasp domain EYD00_06920 PF00120 Glutamine synthetase, catalytic domain EYD00_06930 PF08755 Hemimethylated DNA-binding protein YccV like EYD00_06940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_06950 PF00892 EamA-like transporter family EYD00_06965 PF17757 UvrB interaction domain EYD00_06965 PF03461 TRCF domain EYD00_06965 PF00271 Helicase conserved C-terminal domain EYD00_06965 PF02559 CarD-like/TRCF domain EYD00_06965 PF00270 DEAD/DEAH box helicase EYD00_06975 PF17191 RecG wedge domain EYD00_06975 PF00270 DEAD/DEAH box helicase EYD00_06975 PF00271 Helicase conserved C-terminal domain EYD00_06990 PF01850 PIN domain EYD00_07005 PF01380 SIS domain EYD00_07010 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_07010 PF12804 MobA-like NTP transferase domain EYD00_07010 PF14602 Hexapeptide repeat of succinyl-transferase EYD00_07015 PF07729 FCD domain EYD00_07015 PF00392 Bacterial regulatory proteins, gntR family EYD00_07020 PF02608 ABC transporter substrate-binding protein PnrA-like EYD00_07035 PF00005 ABC transporter EYD00_07045 PF01494 FAD binding domain EYD00_07050 PF03547 Membrane transport protein EYD00_07055 PF02683 Cytochrome C biogenesis protein transmembrane region EYD00_07080 PF00313 'Cold-shock' DNA-binding domain EYD00_07135 PF02540 NAD synthase EYD00_07135 PF00958 GMP synthase C terminal domain EYD00_07135 PF00117 Glutamine amidotransferase class-I EYD00_07240 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) EYD00_07265 PF00486 Transcriptional regulatory protein, C terminal EYD00_07380 PF12704 MacB-like periplasmic core domain EYD00_07380 PF02687 FtsX-like permease family EYD00_07380 PF00005 ABC transporter EYD00_07385 PF12704 MacB-like periplasmic core domain EYD00_07385 PF02687 FtsX-like permease family EYD00_07385 PF00005 ABC transporter EYD00_07405 PF01521 Iron-sulphur cluster biosynthesis EYD00_07410 PF01883 Iron-sulfur cluster assembly protein EYD00_07415 PF00266 Aminotransferase class-V EYD00_07420 PF01458 Uncharacterized protein family (UPF0051) EYD00_07425 PF00005 ABC transporter EYD00_07430 PF01458 Uncharacterized protein family (UPF0051) EYD00_07435 PF00266 Aminotransferase class-V EYD00_07440 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EYD00_07450 PF03702 Anhydro-N-acetylmuramic acid kinase EYD00_07455 PF00579 tRNA synthetases class I (W and Y) EYD00_07465 PF00578 AhpC/TSA family EYD00_07470 PF04305 Protein of unknown function (DUF455) EYD00_07475 PF08525 Opacity-associated protein A N-terminal motif EYD00_07475 PF01551 Peptidase family M23 EYD00_07475 PF01476 LysM domain EYD00_07480 PF00270 DEAD/DEAH box helicase EYD00_07480 PF00271 Helicase conserved C-terminal domain EYD00_07500 PF00834 Ribulose-phosphate 3 epimerase family EYD00_07510 PF00206 Lyase EYD00_07510 PF10397 Adenylosuccinate lyase C-terminus EYD00_07520 PF01259 SAICAR synthetase EYD00_07525 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase EYD00_07545 PF00155 Aminotransferase class I and II EYD00_07545 PF00392 Bacterial regulatory proteins, gntR family EYD00_07555 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EYD00_07555 PF02769 AIR synthase related protein, C-terminal domain EYD00_07555 PF00586 AIR synthase related protein, N-terminal domain EYD00_07575 PF00462 Glutaredoxin EYD00_07580 PF07690 Major Facilitator Superfamily EYD00_07585 PF00459 Inositol monophosphatase family EYD00_07590 PF00459 Inositol monophosphatase family EYD00_07595 PF01171 PP-loop family EYD00_07600 PF04960 Glutaminase EYD00_07605 PF00163 Ribosomal protein S4/S9 N-terminal domain EYD00_07605 PF01479 S4 domain EYD00_07610 PF03741 Integral membrane protein TerC family EYD00_07630 PF00892 EamA-like transporter family EYD00_07635 PF01810 LysE type translocator EYD00_07650 PF01177 Asp/Glu/Hydantoin racemase EYD00_07655 PF00588 SpoU rRNA Methylase family EYD00_07665 PF00180 Isocitrate/isopropylmalate dehydrogenase EYD00_07675 PF01411 tRNA synthetases class II (A) EYD00_07675 PF02272 DHHA1 domain EYD00_07675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EYD00_07685 PF00154 recA bacterial DNA recombination protein EYD00_07690 PF00294 pfkB family carbohydrate kinase EYD00_07695 PF04227 Indigoidine synthase A like protein EYD00_07700 PF00691 OmpA family EYD00_07700 PF01389 OmpA-like transmembrane domain EYD00_07710 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_07715 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_07720 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_07725 PF06233 Usg-like family EYD00_07735 PF09084 NMT1/THI5 like EYD00_07740 PF13404 AsnC-type helix-turn-helix domain EYD00_07740 PF01037 Lrp/AsnC ligand binding domain EYD00_07745 PF03167 Uracil DNA glycosylase superfamily EYD00_07755 PF00989 PAS fold EYD00_07755 PF00512 His Kinase A (phospho-acceptor) domain EYD00_07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_07760 PF01219 Prokaryotic diacylglycerol kinase EYD00_07765 PF02277 Phosphoribosyltransferase EYD00_07770 PF02654 Cobalamin-5-phosphate synthase EYD00_07785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EYD00_07790 PF01061 ABC-2 type transporter EYD00_07795 PF00005 ABC transporter EYD00_07815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_07815 PF17200 Single Cache domain 2 EYD00_07815 PF00672 HAMP domain EYD00_07825 PF12002 MgsA AAA+ ATPase C terminal EYD00_07825 PF16193 AAA C-terminal domain EYD00_07825 PF00004 ATPase family associated with various cellular activities (AAA) EYD00_07830 PF13180 PDZ domain EYD00_07830 PF17820 PDZ domain EYD00_07845 PF00920 Dehydratase family EYD00_07850 PF00174 Oxidoreductase molybdopterin binding domain EYD00_07855 PF01794 Ferric reductase like transmembrane component EYD00_07865 PF01196 Ribosomal protein L17 EYD00_07870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EYD00_07870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EYD00_07870 PF01000 RNA polymerase Rpb3/RpoA insert domain EYD00_07875 PF00411 Ribosomal protein S11 EYD00_07880 PF00416 Ribosomal protein S13/S18 EYD00_07890 PF00344 SecY translocase EYD00_07895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EYD00_07900 PF00327 Ribosomal protein L30p/L7e EYD00_07905 PF00333 Ribosomal protein S5, N-terminal domain EYD00_07905 PF03719 Ribosomal protein S5, C-terminal domain EYD00_07910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EYD00_07915 PF00347 Ribosomal protein L6 EYD00_07920 PF00410 Ribosomal protein S8 EYD00_07925 PF00253 Ribosomal protein S14p/S29e EYD00_07930 PF00281 Ribosomal protein L5 EYD00_07930 PF00673 ribosomal L5P family C-terminus EYD00_07935 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EYD00_07935 PF00467 KOW motif EYD00_07940 PF00238 Ribosomal protein L14p/L23e EYD00_07945 PF00366 Ribosomal protein S17 EYD00_07950 PF00831 Ribosomal L29 protein EYD00_07955 PF00252 Ribosomal protein L16p/L10e EYD00_07960 PF00189 Ribosomal protein S3, C-terminal domain EYD00_07960 PF07650 KH domain EYD00_07965 PF00237 Ribosomal protein L22p/L17e EYD00_07970 PF00203 Ribosomal protein S19 EYD00_07975 PF03947 Ribosomal Proteins L2, C-terminal domain EYD00_07975 PF00181 Ribosomal Proteins L2, RNA binding domain EYD00_07980 PF00276 Ribosomal protein L23 EYD00_07985 PF00573 Ribosomal protein L4/L1 family EYD00_07990 PF00297 Ribosomal protein L3 EYD00_07995 PF00338 Ribosomal protein S10p/S20e EYD00_08000 PF03143 Elongation factor Tu C-terminal domain EYD00_08000 PF03144 Elongation factor Tu domain 2 EYD00_08000 PF00009 Elongation factor Tu GTP binding domain EYD00_08005 PF14492 Elongation Factor G, domain II EYD00_08005 PF03764 Elongation factor G, domain IV EYD00_08005 PF00009 Elongation factor Tu GTP binding domain EYD00_08005 PF00679 Elongation factor G C-terminus EYD00_08005 PF03144 Elongation factor Tu domain 2 EYD00_08010 PF00177 Ribosomal protein S7p/S5e EYD00_08015 PF00164 Ribosomal protein S12/S23 EYD00_08035 PF05000 RNA polymerase Rpb1, domain 4 EYD00_08035 PF04997 RNA polymerase Rpb1, domain 1 EYD00_08035 PF04983 RNA polymerase Rpb1, domain 3 EYD00_08035 PF00623 RNA polymerase Rpb1, domain 2 EYD00_08035 PF04998 RNA polymerase Rpb1, domain 5 EYD00_08040 PF04560 RNA polymerase Rpb2, domain 7 EYD00_08040 PF00562 RNA polymerase Rpb2, domain 6 EYD00_08040 PF10385 RNA polymerase beta subunit external 1 domain EYD00_08040 PF04565 RNA polymerase Rpb2, domain 3 EYD00_08040 PF04561 RNA polymerase Rpb2, domain 2 EYD00_08040 PF04563 RNA polymerase beta subunit EYD00_08045 PF00542 Ribosomal protein L7/L12 C-terminal domain EYD00_08045 PF16320 Ribosomal protein L7/L12 dimerisation domain EYD00_08050 PF00466 Ribosomal protein L10 EYD00_08055 PF00687 Ribosomal protein L1p/L10e family EYD00_08060 PF00298 Ribosomal protein L11, RNA binding domain EYD00_08060 PF03946 Ribosomal protein L11, N-terminal domain EYD00_08065 PF00467 KOW motif EYD00_08065 PF02357 Transcription termination factor nusG EYD00_08070 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EYD00_08080 PF08485 Polysaccharide biosynthesis protein C-terminal EYD00_08080 PF02719 Polysaccharide biosynthesis protein EYD00_08085 PF03144 Elongation factor Tu domain 2 EYD00_08085 PF03143 Elongation factor Tu C-terminal domain EYD00_08085 PF00009 Elongation factor Tu GTP binding domain EYD00_08090 PF03741 Integral membrane protein TerC family EYD00_08125 PF00588 SpoU rRNA Methylase family EYD00_08125 PF08032 RNA 2'-O ribose methyltransferase substrate binding EYD00_08130 PF03061 Thioesterase superfamily EYD00_08145 PF13460 NAD(P)H-binding EYD00_08165 PF17757 UvrB interaction domain EYD00_08165 PF12344 Ultra-violet resistance protein B EYD00_08165 PF00271 Helicase conserved C-terminal domain EYD00_08165 PF04851 Type III restriction enzyme, res subunit EYD00_08165 PF02151 UvrB/uvrC motif EYD00_08175 PF00756 Putative esterase EYD00_08175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD00_08195 PF01556 DnaJ C terminal domain EYD00_08195 PF00226 DnaJ domain EYD00_08195 PF00684 DnaJ central domain EYD00_08210 PF17151 Periplasmic sensor domain EYD00_08210 PF00990 Diguanylate cyclase, GGDEF domain EYD00_08220 PF08402 TOBE domain EYD00_08220 PF00005 ABC transporter EYD00_08230 PF01547 Bacterial extracellular solute-binding protein EYD00_08240 PF00155 Aminotransferase class I and II EYD00_08245 PF05025 RbsD / FucU transport protein family EYD00_08255 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EYD00_08255 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EYD00_08260 PF00440 Bacterial regulatory proteins, tetR family EYD00_08265 PF06719 AraC-type transcriptional regulator N-terminus EYD00_08265 PF12833 Helix-turn-helix domain EYD00_08270 PF00107 Zinc-binding dehydrogenase EYD00_08270 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_08275 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_08280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EYD00_08290 PF14490 Helix-hairpin-helix containing domain EYD00_08290 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EYD00_08290 PF13538 UvrD-like helicase C-terminal domain EYD00_08300 PF08281 Sigma-70, region 4 EYD00_08300 PF04542 Sigma-70 region 2 EYD00_08315 PF00248 Aldo/keto reductase family EYD00_08330 PF10369 Small subunit of acetolactate synthase EYD00_08335 PF00205 Thiamine pyrophosphate enzyme, central domain EYD00_08335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD00_08335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD00_08355 PF13302 Acetyltransferase (GNAT) domain EYD00_08365 PF13180 PDZ domain EYD00_08370 PF01145 SPFH domain / Band 7 family EYD00_08375 PF01145 SPFH domain / Band 7 family EYD00_08380 PF00186 Dihydrofolate reductase EYD00_08385 PF00303 Thymidylate synthase EYD00_08420 PF01565 FAD binding domain EYD00_08420 PF02913 FAD linked oxidases, C-terminal domain EYD00_08425 PF00873 AcrB/AcrD/AcrF family EYD00_08430 PF13533 Biotin-lipoyl like EYD00_08440 PF13361 UvrD-like helicase C-terminal domain EYD00_08440 PF00580 UvrD/REP helicase N-terminal domain EYD00_08465 PF00857 Isochorismatase family EYD00_08485 PF00557 Metallopeptidase family M24 EYD00_08485 PF01321 Creatinase/Prolidase N-terminal domain EYD00_08500 PF02630 SCO1/SenC EYD00_08505 PF01584 CheW-like domain EYD00_08515 PF00929 Exonuclease EYD00_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_08520 PF03466 LysR substrate binding domain EYD00_08530 PF00583 Acetyltransferase (GNAT) family EYD00_08540 PF00533 BRCA1 C Terminus (BRCT) domain EYD00_08540 PF01653 NAD-dependent DNA ligase adenylation domain EYD00_08540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EYD00_08540 PF03120 NAD-dependent DNA ligase OB-fold domain EYD00_08540 PF12826 Helix-hairpin-helix motif EYD00_08545 PF02463 RecF/RecN/SMC N terminal domain EYD00_08550 PF13525 Outer membrane lipoprotein EYD00_08555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EYD00_08560 PF12327 FtsZ family, C-terminal domain EYD00_08560 PF00091 Tubulin/FtsZ family, GTPase domain EYD00_08565 PF02491 SHS2 domain inserted in FTSA EYD00_08570 PF08478 POTRA domain, FtsQ-type EYD00_08570 PF03799 Cell division protein FtsQ EYD00_08575 PF01820 D-ala D-ala ligase N-terminus EYD00_08575 PF07478 D-ala D-ala ligase C-terminus EYD00_08580 PF07690 Major Facilitator Superfamily EYD00_08580 PF00083 Sugar (and other) transporter EYD00_08585 PF01565 FAD binding domain EYD00_08585 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EYD00_08590 PF08245 Mur ligase middle domain EYD00_08590 PF01225 Mur ligase family, catalytic domain EYD00_08590 PF02875 Mur ligase family, glutamate ligase domain EYD00_08595 PF03033 Glycosyltransferase family 28 N-terminal domain EYD00_08595 PF04101 Glycosyltransferase family 28 C-terminal domain EYD00_08600 PF01098 Cell cycle protein EYD00_08605 PF02875 Mur ligase family, glutamate ligase domain EYD00_08605 PF08245 Mur ligase middle domain EYD00_08610 PF00953 Glycosyl transferase family 4 EYD00_08610 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EYD00_08615 PF02875 Mur ligase family, glutamate ligase domain EYD00_08615 PF08245 Mur ligase middle domain EYD00_08615 PF01225 Mur ligase family, catalytic domain EYD00_08620 PF08245 Mur ligase middle domain EYD00_08620 PF01225 Mur ligase family, catalytic domain EYD00_08620 PF02875 Mur ligase family, glutamate ligase domain EYD00_08625 PF03717 Penicillin-binding Protein dimerisation domain EYD00_08625 PF00905 Penicillin binding protein transpeptidase domain EYD00_08635 PF01795 MraW methylase family EYD00_08640 PF02381 MraZ protein, putative antitoxin-like EYD00_08665 PF01510 N-acetylmuramoyl-L-alanine amidase EYD00_08670 PF00226 DnaJ domain EYD00_08670 PF05099 Tellurite resistance protein TerB EYD00_08675 PF00365 Phosphofructokinase EYD00_08695 PF13649 Methyltransferase domain EYD00_08700 PF01183 Glycosyl hydrolases family 25 EYD00_08710 PF02219 Methylenetetrahydrofolate reductase EYD00_08715 PF01209 ubiE/COQ5 methyltransferase family EYD00_08720 PF12848 ABC transporter EYD00_08720 PF00005 ABC transporter EYD00_08725 PF12146 Serine aminopeptidase, S33 EYD00_08730 PF02515 CoA-transferase family III EYD00_08735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD00_08735 PF00205 Thiamine pyrophosphate enzyme, central domain EYD00_08735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD00_08745 PF01042 Endoribonuclease L-PSP EYD00_08760 PF01476 LysM domain EYD00_08760 PF03734 L,D-transpeptidase catalytic domain EYD00_08765 PF07690 Major Facilitator Superfamily EYD00_08775 PF10609 NUBPL iron-transfer P-loop NTPase EYD00_08780 PF00465 Iron-containing alcohol dehydrogenase EYD00_08785 PF00171 Aldehyde dehydrogenase family EYD00_08790 PF00120 Glutamine synthetase, catalytic domain EYD00_08790 PF03951 Glutamine synthetase, beta-Grasp domain EYD00_08795 PF13520 Amino acid permease EYD00_08805 PF01418 Helix-turn-helix domain, rpiR family EYD00_08805 PF01380 SIS domain EYD00_08820 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_08830 PF08402 TOBE domain EYD00_08830 PF00005 ABC transporter EYD00_08835 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_08835 PF00107 Zinc-binding dehydrogenase EYD00_08845 PF07690 Major Facilitator Superfamily EYD00_08850 PF02965 Vitamin B12 dependent methionine synthase, activation domain EYD00_08850 PF02574 Homocysteine S-methyltransferase EYD00_08850 PF00809 Pterin binding enzyme EYD00_08850 PF02310 B12 binding domain EYD00_08850 PF02607 B12 binding domain EYD00_08870 PF13505 Outer membrane protein beta-barrel domain EYD00_08885 PF04402 Protein of unknown function (DUF541) EYD00_08895 PF01894 Uncharacterised protein family UPF0047 EYD00_08900 PF01590 GAF domain EYD00_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_08900 PF00512 His Kinase A (phospho-acceptor) domain EYD00_08900 PF00360 Phytochrome region EYD00_08900 PF08446 PAS fold EYD00_08910 PF04546 Sigma-70, non-essential region EYD00_08910 PF04545 Sigma-70, region 4 EYD00_08910 PF04539 Sigma-70 region 3 EYD00_08910 PF03979 Sigma-70 factor, region 1.1 EYD00_08910 PF00140 Sigma-70 factor, region 1.2 EYD00_08910 PF04542 Sigma-70 region 2 EYD00_08915 PF08278 DNA primase DnaG DnaB-binding EYD00_08915 PF10410 DnaB-helicase binding domain of primase EYD00_08915 PF08275 DNA primase catalytic core, N-terminal domain EYD00_08915 PF01807 CHC2 zinc finger EYD00_08930 PF00117 Glutamine amidotransferase class-I EYD00_08930 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EYD00_08935 PF01554 MatE EYD00_08940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_08940 PF02743 Cache domain EYD00_08940 PF00672 HAMP domain EYD00_08950 PF04228 Putative neutral zinc metallopeptidase EYD00_08965 PF02142 MGS-like domain EYD00_08965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD00_08965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EYD00_08975 PF17158 Membrane-associated sensor, integral membrane domain EYD00_08975 PF00990 Diguanylate cyclase, GGDEF domain EYD00_08980 PF03167 Uracil DNA glycosylase superfamily EYD00_08990 PF03449 Transcription elongation factor, N-terminal EYD00_08990 PF01272 Transcription elongation factor, GreA/GreB, C-term EYD00_08995 PF00534 Glycosyl transferases group 1 EYD00_09000 PF01037 Lrp/AsnC ligand binding domain EYD00_09005 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_09010 PF03466 LysR substrate binding domain EYD00_09020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EYD00_09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_09035 PF03466 LysR substrate binding domain EYD00_09050 PF01699 Sodium/calcium exchanger protein EYD00_09075 PF00313 'Cold-shock' DNA-binding domain EYD00_09080 PF00753 Metallo-beta-lactamase superfamily EYD00_09095 PF12802 MarR family EYD00_09100 PF00486 Transcriptional regulatory protein, C terminal EYD00_09100 PF00072 Response regulator receiver domain EYD00_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_09105 PF00512 His Kinase A (phospho-acceptor) domain EYD00_09105 PF00672 HAMP domain EYD00_09110 PF01588 Putative tRNA binding domain EYD00_09115 PF03807 NADP oxidoreductase coenzyme F420-dependent EYD00_09115 PF14748 Pyrroline-5-carboxylate reductase dimerisation EYD00_09130 PF01790 Prolipoprotein diacylglyceryl transferase EYD00_09155 PF14572 Phosphoribosyl synthetase-associated domain EYD00_09155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EYD00_09165 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase EYD00_09175 PF00535 Glycosyl transferase family 2 EYD00_09180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_09180 PF00672 HAMP domain EYD00_09185 PF00171 Aldehyde dehydrogenase family EYD00_09190 PF02954 Bacterial regulatory protein, Fis family EYD00_09195 PF13188 PAS domain EYD00_09195 PF00563 EAL domain EYD00_09195 PF00990 Diguanylate cyclase, GGDEF domain EYD00_09195 PF03707 Bacterial signalling protein N terminal repeat EYD00_09200 PF14693 Ribosomal protein TL5, C-terminal domain EYD00_09200 PF01386 Ribosomal L25p family EYD00_09205 PF00990 Diguanylate cyclase, GGDEF domain EYD00_09205 PF00563 EAL domain EYD00_09205 PF08447 PAS fold EYD00_09205 PF08448 PAS fold EYD00_09215 PF01195 Peptidyl-tRNA hydrolase EYD00_09225 PF02617 ATP-dependent Clp protease adaptor protein ClpS EYD00_09230 PF06071 Protein of unknown function (DUF933) EYD00_09230 PF01926 50S ribosome-binding GTPase EYD00_09245 PF00156 Phosphoribosyl transferase domain EYD00_09250 PF00032 Cytochrome b(C-terminal)/b6/petD EYD00_09250 PF02167 Cytochrome C1 family EYD00_09250 PF00033 Cytochrome b/b6/petB EYD00_09255 PF00032 Cytochrome b(C-terminal)/b6/petD EYD00_09255 PF00033 Cytochrome b/b6/petB EYD00_09260 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EYD00_09260 PF00355 Rieske [2Fe-2S] domain EYD00_09265 PF03372 Endonuclease/Exonuclease/phosphatase family EYD00_09270 PF00005 ABC transporter EYD00_09270 PF00664 ABC transporter transmembrane region EYD00_09275 PF00664 ABC transporter transmembrane region EYD00_09275 PF00005 ABC transporter EYD00_09285 PF00588 SpoU rRNA Methylase family EYD00_09290 PF02690 Na+/Pi-cotransporter EYD00_09300 PF01218 Coproporphyrinogen III oxidase EYD00_09315 PF01743 Poly A polymerase head domain EYD00_09315 PF13735 tRNA nucleotidyltransferase domain 2 putative EYD00_09315 PF12627 Probable RNA and SrmB- binding site of polymerase A EYD00_09320 PF00293 NUDIX domain EYD00_09330 PF07726 ATPase family associated with various cellular activities (AAA) EYD00_09330 PF17863 AAA lid domain EYD00_09350 PF00583 Acetyltransferase (GNAT) family EYD00_09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_09355 PF03466 LysR substrate binding domain EYD00_09365 PF07690 Major Facilitator Superfamily EYD00_09375 PF13409 Glutathione S-transferase, N-terminal domain EYD00_09390 PF00682 HMGL-like EYD00_09390 PF08502 LeuA allosteric (dimerisation) domain EYD00_09405 PF03594 Benzoate membrane transport protein EYD00_09420 PF08281 Sigma-70, region 4 EYD00_09420 PF04542 Sigma-70 region 2 EYD00_09430 PF00574 Clp protease EYD00_09435 PF04955 HupE / UreJ protein EYD00_09445 PF14489 QueF-like protein EYD00_09450 PF01545 Cation efflux family EYD00_09450 PF16916 Dimerisation domain of Zinc Transporter EYD00_09460 PF13458 Periplasmic binding protein EYD00_09470 PF01022 Bacterial regulatory protein, arsR family EYD00_09475 PF00005 ABC transporter EYD00_09475 PF00571 CBS domain EYD00_09480 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_09485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYD00_09490 PF00265 Thymidine kinase EYD00_09495 PF00127 Copper binding proteins, plastocyanin/azurin family EYD00_09505 PF00196 Bacterial regulatory proteins, luxR family EYD00_09505 PF03472 Autoinducer binding domain EYD00_09510 PF03350 Uncharacterized protein family, UPF0114 EYD00_09515 PF04886 PT repeat EYD00_09515 PF07715 TonB-dependent Receptor Plug Domain EYD00_09515 PF00593 TonB dependent receptor EYD00_09525 PF00117 Glutamine amidotransferase class-I EYD00_09525 PF04715 Anthranilate synthase component I, N terminal region EYD00_09525 PF00425 chorismate binding enzyme EYD00_09535 PF01966 HD domain EYD00_09535 PF11871 Domain of unknown function (DUF3391) EYD00_09540 PF01979 Amidohydrolase family EYD00_09540 PF13382 Adenine deaminase C-terminal domain EYD00_09550 PF00583 Acetyltransferase (GNAT) family EYD00_09555 PF00128 Alpha amylase, catalytic domain EYD00_09560 PF00294 pfkB family carbohydrate kinase EYD00_09575 PF01926 50S ribosome-binding GTPase EYD00_09575 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EYD00_09595 PF05992 SbmA/BacA-like family EYD00_09605 PF00557 Metallopeptidase family M24 EYD00_09620 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD00_09620 PF01799 [2Fe-2S] binding domain EYD00_09625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD00_09625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD00_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_09635 PF03466 LysR substrate binding domain EYD00_09650 PF01979 Amidohydrolase family EYD00_09660 PF01070 FMN-dependent dehydrogenase EYD00_09665 PF00893 Small Multidrug Resistance protein EYD00_09670 PF17932 Tetracyclin repressor-like, C-terminal domain EYD00_09670 PF00440 Bacterial regulatory proteins, tetR family EYD00_09675 PF07943 Penicillin-binding protein 5, C-terminal domain EYD00_09675 PF00768 D-alanyl-D-alanine carboxypeptidase EYD00_09685 PF00576 HIUase/Transthyretin family EYD00_09690 PF04115 Ureidoglycolate lyase EYD00_09705 PF01014 Uricase EYD00_09705 PF09349 OHCU decarboxylase EYD00_09715 PF06299 Protein of unknown function (DUF1045) EYD00_09720 PF01266 FAD dependent oxidoreductase EYD00_09725 PF01266 FAD dependent oxidoreductase EYD00_09725 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EYD00_09730 PF00072 Response regulator receiver domain EYD00_09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_09730 PF01627 Hpt domain EYD00_09730 PF00512 His Kinase A (phospho-acceptor) domain EYD00_09730 PF00672 HAMP domain EYD00_09730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EYD00_09735 PF00271 Helicase conserved C-terminal domain EYD00_09735 PF00270 DEAD/DEAH box helicase EYD00_09745 PF07681 DoxX EYD00_09750 PF03734 L,D-transpeptidase catalytic domain EYD00_09750 PF01476 LysM domain EYD00_09760 PF14403 Circularly permuted ATP-grasp type 2 EYD00_09770 PF08379 Bacterial transglutaminase-like N-terminal region EYD00_09770 PF01841 Transglutaminase-like superfamily EYD00_09790 PF00300 Histidine phosphatase superfamily (branch 1) EYD00_09800 PF02653 Branched-chain amino acid transport system / permease component EYD00_09805 PF00005 ABC transporter EYD00_09810 PF13407 Periplasmic binding protein domain EYD00_09820 PF03466 LysR substrate binding domain EYD00_09820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_09845 PF00672 HAMP domain EYD00_09865 PF00331 Glycosyl hydrolase family 10 EYD00_09870 PF00535 Glycosyl transferase family 2 EYD00_09885 PF03808 Glycosyl transferase WecB/TagA/CpsF family EYD00_09905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYD00_09905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYD00_09905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYD00_09905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYD00_09910 PF01152 Bacterial-like globin EYD00_09930 PF00440 Bacterial regulatory proteins, tetR family EYD00_09930 PF08362 YcdC-like protein, C-terminal region EYD00_09935 PF01546 Peptidase family M20/M25/M40 EYD00_09935 PF07687 Peptidase dimerisation domain EYD00_09940 PF01979 Amidohydrolase family EYD00_09945 PF00293 NUDIX domain EYD00_09950 PF00005 ABC transporter EYD00_09960 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_09965 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_09980 PF00873 AcrB/AcrD/AcrF family EYD00_09990 PF00753 Metallo-beta-lactamase superfamily EYD00_09990 PF12706 Beta-lactamase superfamily domain EYD00_09995 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD00_10000 PF01730 UreF EYD00_10005 PF02814 UreE urease accessory protein, N-terminal domain EYD00_10005 PF05194 UreE urease accessory protein, C-terminal domain EYD00_10010 PF08534 Redoxin EYD00_10020 PF00449 Urease alpha-subunit, N-terminal domain EYD00_10020 PF01979 Amidohydrolase family EYD00_10030 PF07007 Lysozyme inhibitor LprI EYD00_10040 PF00699 Urease beta subunit EYD00_10045 PF06906 Protein of unknown function (DUF1272) EYD00_10050 PF00547 Urease, gamma subunit EYD00_10055 PF01774 UreD urease accessory protein EYD00_10065 PF00005 ABC transporter EYD00_10075 PF00005 ABC transporter EYD00_10075 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD00_10085 PF02653 Branched-chain amino acid transport system / permease component EYD00_10100 PF10931 Protein of unknown function (DUF2735) EYD00_10105 PF03951 Glutamine synthetase, beta-Grasp domain EYD00_10105 PF00120 Glutamine synthetase, catalytic domain EYD00_10110 PF00106 short chain dehydrogenase EYD00_10115 PF00512 His Kinase A (phospho-acceptor) domain EYD00_10115 PF00072 Response regulator receiver domain EYD00_10115 PF01627 Hpt domain EYD00_10115 PF00989 PAS fold EYD00_10115 PF18415 Histidine kinase receptor ArcB trans-membrane domain EYD00_10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_10120 PF00072 Response regulator receiver domain EYD00_10130 PF01522 Polysaccharide deacetylase EYD00_10130 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain EYD00_10135 PF13458 Periplasmic binding protein EYD00_10145 PF00005 ABC transporter EYD00_10150 PF00005 ABC transporter EYD00_10150 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD00_10155 PF11862 Domain of unknown function (DUF3382) EYD00_10155 PF02653 Branched-chain amino acid transport system / permease component EYD00_10160 PF02653 Branched-chain amino acid transport system / permease component EYD00_10165 PF00459 Inositol monophosphatase family EYD00_10195 PF00486 Transcriptional regulatory protein, C terminal EYD00_10195 PF00072 Response regulator receiver domain EYD00_10215 PF10090 Histidine phosphotransferase C-terminal domain EYD00_10235 PF00588 SpoU rRNA Methylase family EYD00_10245 PF00849 RNA pseudouridylate synthase EYD00_10255 PF04545 Sigma-70, region 4 EYD00_10255 PF04542 Sigma-70 region 2 EYD00_10255 PF00140 Sigma-70 factor, region 1.2 EYD00_10265 PF00709 Adenylosuccinate synthetase EYD00_10295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_10305 PF03167 Uracil DNA glycosylase superfamily EYD00_10310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_10315 PF04304 Protein of unknown function (DUF454) EYD00_10320 PF00005 ABC transporter EYD00_10325 PF01032 FecCD transport family EYD00_10330 PF01497 Periplasmic binding protein EYD00_10340 PF06228 Haem utilisation ChuX/HutX EYD00_10360 PF00551 Formyl transferase EYD00_10365 PF05973 Phage derived protein Gp49-like (DUF891) EYD00_10375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_10375 PF00512 His Kinase A (phospho-acceptor) domain EYD00_10375 PF00672 HAMP domain EYD00_10380 PF00072 Response regulator receiver domain EYD00_10380 PF00486 Transcriptional regulatory protein, C terminal EYD00_10390 PF03401 Tripartite tricarboxylate transporter family receptor EYD00_10400 PF01970 Tripartite tricarboxylate transporter TctA family EYD00_10415 PF01032 FecCD transport family EYD00_10420 PF01032 FecCD transport family EYD00_10425 PF00005 ABC transporter EYD00_10430 PF00210 Ferritin-like domain EYD00_10445 PF00248 Aldo/keto reductase family EYD00_10450 PF07690 Major Facilitator Superfamily EYD00_10455 PF03466 LysR substrate binding domain EYD00_10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_10460 PF03466 LysR substrate binding domain EYD00_10470 PF13533 Biotin-lipoyl like EYD00_10475 PF00873 AcrB/AcrD/AcrF family EYD00_10490 PF13091 PLD-like domain EYD00_10490 PF13396 Phospholipase_D-nuclease N-terminal EYD00_10495 PF08543 Phosphomethylpyrimidine kinase EYD00_10500 PF00484 Carbonic anhydrase EYD00_10510 PF01118 Semialdehyde dehydrogenase, NAD binding domain EYD00_10510 PF02774 Semialdehyde dehydrogenase, dimerisation domain EYD00_10520 PF00083 Sugar (and other) transporter EYD00_10525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EYD00_10525 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EYD00_10525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EYD00_10530 PF02233 NAD(P) transhydrogenase beta subunit EYD00_10535 PF01613 Flavin reductase like domain EYD00_10540 PF00881 Nitroreductase family EYD00_10545 PF00561 alpha/beta hydrolase fold EYD00_10550 PF01042 Endoribonuclease L-PSP EYD00_10555 PF00857 Isochorismatase family EYD00_10560 PF00296 Luciferase-like monooxygenase EYD00_10565 PF01126 Heme oxygenase EYD00_10570 PF00701 Dihydrodipicolinate synthetase family EYD00_10575 PF07729 FCD domain EYD00_10575 PF00392 Bacterial regulatory proteins, gntR family EYD00_10585 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_10590 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_10595 PF03459 TOBE domain EYD00_10595 PF00005 ABC transporter EYD00_10595 PF17912 MalK OB fold domain EYD00_10600 PF00294 pfkB family carbohydrate kinase EYD00_10605 PF03576 Peptidase family S58 EYD00_10610 PF01063 Amino-transferase class IV EYD00_10615 PF03466 LysR substrate binding domain EYD00_10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_10620 PF00144 Beta-lactamase EYD00_10625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_10625 PF00005 ABC transporter EYD00_10630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_10630 PF00005 ABC transporter EYD00_10640 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_10645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_10650 PF01244 Membrane dipeptidase (Peptidase family M19) EYD00_10660 PF09924 Uncharacterised conserved protein (DUF2156) EYD00_10660 PF03706 Lysylphosphatidylglycerol synthase TM region EYD00_10690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_10690 PF00512 His Kinase A (phospho-acceptor) domain EYD00_10690 PF08521 Two-component sensor kinase N-terminal EYD00_10695 PF00486 Transcriptional regulatory protein, C terminal EYD00_10695 PF00072 Response regulator receiver domain EYD00_10705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EYD00_10710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_10715 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_10715 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EYD00_10735 PF13193 AMP-binding enzyme C-terminal domain EYD00_10735 PF00501 AMP-binding enzyme EYD00_10760 PF01037 Lrp/AsnC ligand binding domain EYD00_10765 PF00857 Isochorismatase family EYD00_10770 PF03466 LysR substrate binding domain EYD00_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_10775 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_10775 PF14765 Polyketide synthase dehydratase EYD00_10775 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_10775 PF16197 Ketoacyl-synthetase C-terminal extension EYD00_10775 PF00698 Acyl transferase domain EYD00_10775 PF08659 KR domain EYD00_10775 PF00107 Zinc-binding dehydrogenase EYD00_10775 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_10775 PF00550 Phosphopantetheine attachment site EYD00_10785 PF12833 Helix-turn-helix domain EYD00_10835 PF01259 SAICAR synthetase EYD00_10845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_10845 PF00529 HlyD membrane-fusion protein of T1SS EYD00_10850 PF00873 AcrB/AcrD/AcrF family EYD00_10855 PF02321 Outer membrane efflux protein EYD00_10860 PF09285 Elongation factor P, C-terminal EYD00_10860 PF01132 Elongation factor P (EF-P) OB domain EYD00_10860 PF08207 Elongation factor P (EF-P) KOW-like domain EYD00_10865 PF00152 tRNA synthetases class II (D, K and N) EYD00_10870 PF04055 Radical SAM superfamily EYD00_10870 PF12544 Lysine-2,3-aminomutase EYD00_10885 PF03466 LysR substrate binding domain EYD00_10885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_10890 PF01266 FAD dependent oxidoreductase EYD00_10900 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_10905 PF03459 TOBE domain EYD00_10905 PF00005 ABC transporter EYD00_10915 PF03576 Peptidase family S58 EYD00_10920 PF05690 Thiazole biosynthesis protein ThiG EYD00_10930 PF01266 FAD dependent oxidoreductase EYD00_10935 PF13667 ThiC-associated domain EYD00_10935 PF01964 Radical SAM ThiC family EYD00_10940 PF00550 Phosphopantetheine attachment site EYD00_10970 PF00664 ABC transporter transmembrane region EYD00_10970 PF00005 ABC transporter EYD00_10975 PF00027 Cyclic nucleotide-binding domain EYD00_10975 PF13302 Acetyltransferase (GNAT) domain EYD00_10985 PF00211 Adenylate and Guanylate cyclase catalytic domain EYD00_10985 PF00672 HAMP domain EYD00_10995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EYD00_10995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EYD00_10995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EYD00_11000 PF00534 Glycosyl transferases group 1 EYD00_11000 PF13439 Glycosyltransferase Family 4 EYD00_11015 PF00005 ABC transporter EYD00_11015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_11020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_11025 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_11030 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_11030 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_11040 PF13439 Glycosyltransferase Family 4 EYD00_11040 PF00534 Glycosyl transferases group 1 EYD00_11050 PF03932 CutC family EYD00_11055 PF07690 Major Facilitator Superfamily EYD00_11065 PF02838 Glycosyl hydrolase family 20, domain 2 EYD00_11065 PF00728 Glycosyl hydrolase family 20, catalytic domain EYD00_11075 PF01418 Helix-turn-helix domain, rpiR family EYD00_11075 PF01380 SIS domain EYD00_11085 PF00005 ABC transporter EYD00_11085 PF17912 MalK OB fold domain EYD00_11090 PF01547 Bacterial extracellular solute-binding protein EYD00_11095 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_11100 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_11120 PF01380 SIS domain EYD00_11125 PF01979 Amidohydrolase family EYD00_11130 PF00480 ROK family EYD00_11135 PF01494 FAD binding domain EYD00_11140 PF01569 PAP2 superfamily EYD00_11145 PF13288 DXP reductoisomerase C-terminal domain EYD00_11145 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EYD00_11145 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EYD00_11150 PF00155 Aminotransferase class I and II EYD00_11160 PF01103 Surface antigen EYD00_11160 PF17243 POTRA domain TamA domain 1 EYD00_11160 PF07244 Surface antigen variable number repeat EYD00_11170 PF01584 CheW-like domain EYD00_11175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_11175 PF08447 PAS fold EYD00_11175 PF13426 PAS domain EYD00_11180 PF02634 FdhD/NarQ family EYD00_11185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EYD00_11190 PF02874 ATP synthase alpha/beta family, beta-barrel domain EYD00_11190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD00_11195 PF00231 ATP synthase EYD00_11200 PF02874 ATP synthase alpha/beta family, beta-barrel domain EYD00_11200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD00_11200 PF00306 ATP synthase alpha/beta chain, C terminal domain EYD00_11205 PF00213 ATP synthase delta (OSCP) subunit EYD00_11215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EYD00_11215 PF18074 Primosomal protein N C-terminal domain EYD00_11215 PF17764 3′ DNA-binding domain (3′BD) EYD00_11215 PF00270 DEAD/DEAH box helicase EYD00_11220 PF02899 Phage integrase, N-terminal SAM-like domain EYD00_11220 PF00589 Phage integrase family EYD00_11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_11240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD00_11245 PF01810 LysE type translocator EYD00_11255 PF00364 Biotin-requiring enzyme EYD00_11255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EYD00_11255 PF02817 e3 binding domain EYD00_11260 PF16078 2-oxoglutarate dehydrogenase N-terminus EYD00_11260 PF00676 Dehydrogenase E1 component EYD00_11260 PF16870 2-oxoglutarate dehydrogenase C-terminal EYD00_11260 PF02779 Transketolase, pyrimidine binding domain EYD00_11265 PF00549 CoA-ligase EYD00_11265 PF02629 CoA binding domain EYD00_11270 PF00549 CoA-ligase EYD00_11270 PF08442 ATP-grasp domain EYD00_11275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EYD00_11275 PF00056 lactate/malate dehydrogenase, NAD binding domain EYD00_11280 PF03969 AFG1-like ATPase EYD00_11285 PF02974 Protease inhibitor Inh EYD00_11290 PF13085 2Fe-2S iron-sulfur cluster binding domain EYD00_11290 PF13237 4Fe-4S dicluster domain EYD00_11295 PF02910 Fumarate reductase flavoprotein C-term EYD00_11295 PF00890 FAD binding domain EYD00_11305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EYD00_11330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EYD00_11330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EYD00_11335 PF00814 Glycoprotease family EYD00_11340 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EYD00_11340 PF03900 Porphobilinogen deaminase, C-terminal domain EYD00_11365 PF00117 Glutamine amidotransferase class-I EYD00_11375 PF02594 Uncharacterised ACR, YggU family COG1872 EYD00_11380 PF00719 Inorganic pyrophosphatase EYD00_11400 PF01432 Peptidase family M3 EYD00_11410 PF01047 MarR family EYD00_11415 PF07690 Major Facilitator Superfamily EYD00_11420 PF00764 Arginosuccinate synthase EYD00_11425 PF00106 short chain dehydrogenase EYD00_11430 PF01810 LysE type translocator EYD00_11440 PF02653 Branched-chain amino acid transport system / permease component EYD00_11450 PF04055 Radical SAM superfamily EYD00_11465 PF01329 Pterin 4 alpha carbinolamine dehydratase EYD00_11470 PF01451 Low molecular weight phosphotyrosine protein phosphatase EYD00_11475 PF02834 LigT like Phosphoesterase EYD00_11480 PF13472 GDSL-like Lipase/Acylhydrolase family EYD00_11485 PF00005 ABC transporter EYD00_11495 PF01027 Inhibitor of apoptosis-promoting Bax1 EYD00_11510 PF00330 Aconitase family (aconitate hydratase) EYD00_11510 PF00694 Aconitase C-terminal domain EYD00_11515 PF00005 ABC transporter EYD00_11525 PF03379 CcmB protein EYD00_11530 PF01578 Cytochrome C assembly protein EYD00_11540 PF08534 Redoxin EYD00_11545 PF00990 Diguanylate cyclase, GGDEF domain EYD00_11550 PF10755 Protein of unknown function (DUF2585) EYD00_11555 PF04279 Intracellular septation protein A EYD00_11560 PF02881 SRP54-type protein, helical bundle domain EYD00_11560 PF00448 SRP54-type protein, GTPase domain EYD00_11565 PF00919 Uncharacterized protein family UPF0004 EYD00_11565 PF04055 Radical SAM superfamily EYD00_11570 PF01678 Diaminopimelate epimerase EYD00_11575 PF12706 Beta-lactamase superfamily domain EYD00_11585 PF02978 Signal peptide binding domain EYD00_11585 PF02881 SRP54-type protein, helical bundle domain EYD00_11585 PF00448 SRP54-type protein, GTPase domain EYD00_11590 PF02153 Prephenate dehydrogenase EYD00_11590 PF01817 Chorismate mutase type II EYD00_11595 PF00886 Ribosomal protein S16 EYD00_11600 PF01782 RimM N-terminal domain EYD00_11600 PF05239 PRC-barrel domain EYD00_11605 PF01746 tRNA (Guanine-1)-methyltransferase EYD00_11615 PF01245 Ribosomal protein L19 EYD00_11625 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_11630 PF07690 Major Facilitator Superfamily EYD00_11640 PF00330 Aconitase family (aconitate hydratase) EYD00_11645 PF01435 Peptidase family M48 EYD00_11655 PF00005 ABC transporter EYD00_11660 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_11665 PF01547 Bacterial extracellular solute-binding protein EYD00_11685 PF04204 Homoserine O-succinyltransferase EYD00_11690 PF01263 Aldose 1-epimerase EYD00_11695 PF00912 Transglycosylase EYD00_11700 PF00348 Polyprenyl synthetase EYD00_11705 PF13488 Glycine zipper EYD00_11705 PF00691 OmpA family EYD00_11710 PF04551 GcpE protein EYD00_11715 PF07690 Major Facilitator Superfamily EYD00_11720 PF00455 DeoR C terminal sensor domain EYD00_11720 PF08220 DeoR-like helix-turn-helix domain EYD00_11725 PF02436 Conserved carboxylase domain EYD00_11725 PF00682 HMGL-like EYD00_11725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD00_11725 PF00364 Biotin-requiring enzyme EYD00_11725 PF02785 Biotin carboxylase C-terminal domain EYD00_11725 PF00289 Biotin carboxylase, N-terminal domain EYD00_11730 PF00196 Bacterial regulatory proteins, luxR family EYD00_11730 PF00072 Response regulator receiver domain EYD00_11735 PF00005 ABC transporter EYD00_11735 PF00664 ABC transporter transmembrane region EYD00_11740 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EYD00_11740 PF06165 Glycosyltransferase family 36 EYD00_11740 PF10091 Putative glucoamylase EYD00_11745 PF01546 Peptidase family M20/M25/M40 EYD00_11745 PF07687 Peptidase dimerisation domain EYD00_11755 PF01266 FAD dependent oxidoreductase EYD00_11760 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_11765 PF00920 Dehydratase family EYD00_11770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD00_11770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_11775 PF01370 NAD dependent epimerase/dehydratase family EYD00_11780 PF01565 FAD binding domain EYD00_11780 PF02913 FAD linked oxidases, C-terminal domain EYD00_11785 PF00392 Bacterial regulatory proteins, gntR family EYD00_11785 PF07729 FCD domain EYD00_11795 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EYD00_11800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_11805 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_11810 PF13193 AMP-binding enzyme C-terminal domain EYD00_11810 PF16177 Acetyl-coenzyme A synthetase N-terminus EYD00_11810 PF00501 AMP-binding enzyme EYD00_11820 PF01168 Alanine racemase, N-terminal domain EYD00_11825 PF00133 tRNA synthetases class I (I, L, M and V) EYD00_11825 PF08264 Anticodon-binding domain of tRNA EYD00_11825 PF13603 Leucyl-tRNA synthetase, Domain 2 EYD00_11840 PF00037 4Fe-4S binding domain EYD00_11840 PF11953 Domain of unknown function (DUF3470) EYD00_11845 PF01479 S4 domain EYD00_11845 PF00579 tRNA synthetases class I (W and Y) EYD00_11860 PF01494 FAD binding domain EYD00_11870 PF00543 Nitrogen regulatory protein P-II EYD00_11875 PF00909 Ammonium Transporter Family EYD00_11880 PF09397 Ftsk gamma domain EYD00_11880 PF17854 FtsK alpha domain EYD00_11880 PF01580 FtsK/SpoIIIE family EYD00_11880 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EYD00_11885 PF03548 Outer membrane lipoprotein carrier protein LolA EYD00_11900 PF00486 Transcriptional regulatory protein, C terminal EYD00_11900 PF00072 Response regulator receiver domain EYD00_11910 PF02559 CarD-like/TRCF domain EYD00_11915 PF05088 Bacterial NAD-glutamate dehydrogenase EYD00_11920 PF11700 Vacuole effluxer Atg22 like EYD00_11925 PF05233 PHB accumulation regulatory domain EYD00_11925 PF07879 PHB/PHA accumulation regulator DNA-binding domain EYD00_11930 PF02803 Thiolase, C-terminal domain EYD00_11930 PF00108 Thiolase, N-terminal domain EYD00_11945 PF00210 Ferritin-like domain EYD00_11950 PF00293 NUDIX domain EYD00_11960 PF13180 PDZ domain EYD00_11960 PF03572 Peptidase family S41 EYD00_11970 PF02590 Predicted SPOUT methyltransferase EYD00_11980 PF01467 Cytidylyltransferase-like EYD00_11985 PF00171 Aldehyde dehydrogenase family EYD00_11990 PF00696 Amino acid kinase family EYD00_11990 PF01472 PUA domain EYD00_11995 PF01018 GTP1/OBG EYD00_11995 PF01926 50S ribosome-binding GTPase EYD00_12000 PF13302 Acetyltransferase (GNAT) domain EYD00_12010 PF01016 Ribosomal L27 protein EYD00_12015 PF00829 Ribosomal prokaryotic L21 protein EYD00_12030 PF03328 HpcH/HpaI aldolase/citrate lyase family EYD00_12040 PF00694 Aconitase C-terminal domain EYD00_12045 PF00180 Isocitrate/isopropylmalate dehydrogenase EYD00_12050 PF03150 Di-haem cytochrome c peroxidase EYD00_12055 PF07685 CobB/CobQ-like glutamine amidotransferase domain EYD00_12055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD00_12060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_12060 PF10414 Sirohaem synthase dimerisation region EYD00_12060 PF14824 Sirohaem biosynthesis protein central EYD00_12065 PF01888 CbiD EYD00_12070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_12080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_12085 PF02571 Precorrin-6x reductase CbiJ/CobK EYD00_12090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_12095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_12100 PF02570 Precorrin-8X methylmutase EYD00_12105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EYD00_12110 PF02514 CobN/Magnesium Chelatase EYD00_12115 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD00_12115 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD00_12125 PF12557 Cob(I)alamin adenosyltransferase N terminal EYD00_12125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EYD00_12130 PF07685 CobB/CobQ-like glutamine amidotransferase domain EYD00_12130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD00_12135 PF03186 CobD/Cbib protein EYD00_12140 PF00155 Aminotransferase class I and II EYD00_12145 PF13378 Enolase C-terminal domain-like EYD00_12145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_12150 PF05336 L-rhamnose mutarotase EYD00_12155 PF01232 Mannitol dehydrogenase Rossmann domain EYD00_12155 PF08125 Mannitol dehydrogenase C-terminal domain EYD00_12160 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_12160 PF00107 Zinc-binding dehydrogenase EYD00_12170 PF00248 Aldo/keto reductase family EYD00_12180 PF02653 Branched-chain amino acid transport system / permease component EYD00_12185 PF00005 ABC transporter EYD00_12190 PF00392 Bacterial regulatory proteins, gntR family EYD00_12190 PF07729 FCD domain EYD00_12195 PF08666 SAF domain EYD00_12195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EYD00_12200 PF01808 AICARFT/IMPCHase bienzyme EYD00_12200 PF02142 MGS-like domain EYD00_12210 PF01029 NusB family EYD00_12210 PF01189 16S rRNA methyltransferase RsmB/F EYD00_12215 PF01435 Peptidase family M48 EYD00_12225 PF02195 ParB-like nuclease domain EYD00_12225 PF17762 HTH domain found in ParB protein EYD00_12230 PF13614 AAA domain EYD00_12235 PF02527 rRNA small subunit methyltransferase G EYD00_12240 PF01134 Glucose inhibited division protein A EYD00_12240 PF13932 GidA associated domain EYD00_12245 PF10396 GTP-binding protein TrmE N-terminus EYD00_12245 PF01926 50S ribosome-binding GTPase EYD00_12245 PF12631 MnmE helical domain EYD00_12250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EYD00_12250 PF07498 Rho termination factor, N-terminal domain EYD00_12250 PF07497 Rho termination factor, RNA-binding domain EYD00_12260 PF01208 Uroporphyrinogen decarboxylase (URO-D) EYD00_12265 PF03618 Kinase/pyrophosphorylase EYD00_12270 PF02545 Maf-like protein EYD00_12275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EYD00_12275 PF01488 Shikimate / quinate 5-dehydrogenase EYD00_12275 PF08501 Shikimate dehydrogenase substrate binding domain EYD00_12280 PF01121 Dephospho-CoA kinase EYD00_12285 PF00929 Exonuclease EYD00_12290 PF02556 Preprotein translocase subunit SecB EYD00_12295 PF04186 FxsA cytoplasmic membrane protein EYD00_12305 PF06725 3D domain EYD00_12305 PF03562 MltA specific insert domain EYD00_12320 PF00204 DNA gyrase B EYD00_12320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_12320 PF01751 Toprim domain EYD00_12320 PF00986 DNA gyrase B subunit, carboxyl terminus EYD00_12330 PF01557 Fumarylacetoacetate (FAA) hydrolase family EYD00_12345 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EYD00_12350 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_12355 PF00290 Tryptophan synthase alpha chain EYD00_12360 PF01039 Carboxyl transferase domain EYD00_12365 PF08245 Mur ligase middle domain EYD00_12365 PF02875 Mur ligase family, glutamate ligase domain EYD00_12370 PF00085 Thioredoxin EYD00_12375 PF00580 UvrD/REP helicase N-terminal domain EYD00_12375 PF12705 PD-(D/E)XK nuclease superfamily EYD00_12375 PF13361 UvrD-like helicase C-terminal domain EYD00_12385 PF12804 MobA-like NTP transferase domain EYD00_12390 PF01636 Phosphotransferase enzyme family EYD00_12395 PF00512 His Kinase A (phospho-acceptor) domain EYD00_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_12405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EYD00_12405 PF05221 S-adenosyl-L-homocysteine hydrolase EYD00_12410 PF00381 PTS HPr component phosphorylation site EYD00_12415 PF03610 PTS system fructose IIA component EYD00_12415 PF03830 PTS system sorbose subfamily IIB component EYD00_12420 PF07475 HPr Serine kinase C-terminal domain EYD00_12420 PF02603 HPr Serine kinase N terminus EYD00_12425 PF13756 Stimulus-sensing domain EYD00_12425 PF00672 HAMP domain EYD00_12425 PF13755 Sensor N-terminal transmembrane domain EYD00_12425 PF00512 His Kinase A (phospho-acceptor) domain EYD00_12425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_12430 PF00486 Transcriptional regulatory protein, C terminal EYD00_12430 PF00072 Response regulator receiver domain EYD00_12435 PF01293 Phosphoenolpyruvate carboxykinase EYD00_12440 PF00472 RF-1 domain EYD00_12445 PF01476 LysM domain EYD00_12445 PF04972 BON domain EYD00_12450 PF00485 Phosphoribulokinase / Uridine kinase family EYD00_12455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EYD00_12460 PF00977 Histidine biosynthesis protein EYD00_12465 PF00977 Histidine biosynthesis protein EYD00_12470 PF00117 Glutamine amidotransferase class-I EYD00_12480 PF00475 Imidazoleglycerol-phosphate dehydratase EYD00_12485 PF00227 Proteasome subunit EYD00_12490 PF10431 C-terminal, D2-small domain, of ClpB protein EYD00_12490 PF00004 ATPase family associated with various cellular activities (AAA) EYD00_12490 PF07724 AAA domain (Cdc48 subfamily) EYD00_12500 PF01274 Malate synthase EYD00_12515 PF00072 Response regulator receiver domain EYD00_12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_12520 PF00512 His Kinase A (phospho-acceptor) domain EYD00_12525 PF00270 DEAD/DEAH box helicase EYD00_12525 PF04408 Helicase associated domain (HA2) EYD00_12525 PF08482 ATP-dependent helicase C-terminal EYD00_12525 PF00271 Helicase conserved C-terminal domain EYD00_12570 PF09382 RQC domain EYD00_12570 PF16124 RecQ zinc-binding EYD00_12570 PF00570 HRDC domain EYD00_12570 PF00270 DEAD/DEAH box helicase EYD00_12570 PF00271 Helicase conserved C-terminal domain EYD00_12580 PF13407 Periplasmic binding protein domain EYD00_12585 PF02653 Branched-chain amino acid transport system / permease component EYD00_12590 PF00005 ABC transporter EYD00_12595 PF00485 Phosphoribulokinase / Uridine kinase family EYD00_12600 PF00462 Glutaredoxin EYD00_12605 PF07972 NrdI Flavodoxin like EYD00_12610 PF08343 Ribonucleotide reductase N-terminal EYD00_12610 PF00317 Ribonucleotide reductase, all-alpha domain EYD00_12610 PF02867 Ribonucleotide reductase, barrel domain EYD00_12615 PF00268 Ribonucleotide reductase, small chain EYD00_12625 PF02463 RecF/RecN/SMC N terminal domain EYD00_12630 PF00581 Rhodanese-like domain EYD00_12630 PF00899 ThiF family EYD00_12640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_12640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_12650 PF00294 pfkB family carbohydrate kinase EYD00_12660 PF08468 Methyltransferase small domain N-terminal EYD00_12660 PF05175 Methyltransferase small domain EYD00_12665 PF00575 S1 RNA binding domain EYD00_12665 PF00013 KH domain EYD00_12665 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EYD00_12665 PF01138 3' exoribonuclease family, domain 1 EYD00_12665 PF03725 3' exoribonuclease family, domain 2 EYD00_12670 PF00312 Ribosomal protein S15 EYD00_12675 PF01509 TruB family pseudouridylate synthase (N terminal domain) EYD00_12675 PF16198 tRNA pseudouridylate synthase B C-terminal domain EYD00_12675 PF09157 Pseudouridine synthase II TruB, C-terminal EYD00_12680 PF02033 Ribosome-binding factor A EYD00_12685 PF03144 Elongation factor Tu domain 2 EYD00_12685 PF00009 Elongation factor Tu GTP binding domain EYD00_12685 PF11987 Translation-initiation factor 2 EYD00_12685 PF04760 Translation initiation factor IF-2, N-terminal region EYD00_12685 PF08364 Bacterial translation initiation factor IF-2 associated region EYD00_12695 PF08529 NusA N-terminal domain EYD00_12695 PF00575 S1 RNA binding domain EYD00_12695 PF13184 NusA-like KH domain EYD00_12700 PF17384 RimP C-terminal SH3 domain EYD00_12700 PF02576 RimP N-terminal domain EYD00_12705 PF05977 Transmembrane secretion effector EYD00_12710 PF13406 Transglycosylase SLT domain EYD00_12715 PF02132 RecR protein EYD00_12715 PF13662 Toprim domain EYD00_12725 PF02575 YbaB/EbfC DNA-binding family EYD00_12730 PF12169 DNA polymerase III subunits gamma and tau domain III EYD00_12730 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EYD00_12730 PF12170 DNA polymerase III tau subunit V interacting with alpha EYD00_12745 PF09297 NADH pyrophosphatase zinc ribbon domain EYD00_12745 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EYD00_12745 PF00293 NUDIX domain EYD00_12750 PF00800 Prephenate dehydratase EYD00_12750 PF01817 Chorismate mutase type II EYD00_12755 PF02348 Cytidylyltransferase EYD00_12760 PF00034 Cytochrome c EYD00_12765 PF02397 Bacterial sugar transferase EYD00_12770 PF00905 Penicillin binding protein transpeptidase domain EYD00_12770 PF00912 Transglycosylase EYD00_12775 PF04073 Aminoacyl-tRNA editing domain EYD00_12785 PF00313 'Cold-shock' DNA-binding domain EYD00_12790 PF01546 Peptidase family M20/M25/M40 EYD00_12790 PF07687 Peptidase dimerisation domain EYD00_12795 PF01047 MarR family EYD00_12800 PF01367 5'-3' exonuclease, C-terminal SAM fold EYD00_12800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EYD00_12800 PF01612 3'-5' exonuclease EYD00_12800 PF00476 DNA polymerase family A EYD00_12810 PF01783 Ribosomal L32p protein family EYD00_12815 PF00512 His Kinase A (phospho-acceptor) domain EYD00_12815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_12815 PF02743 Cache domain EYD00_12820 PF02954 Bacterial regulatory protein, Fis family EYD00_12820 PF00158 Sigma-54 interaction domain EYD00_12820 PF00072 Response regulator receiver domain EYD00_12830 PF03401 Tripartite tricarboxylate transporter family receptor EYD00_12835 PF07331 Tripartite tricarboxylate transporter TctB family EYD00_12840 PF01970 Tripartite tricarboxylate transporter TctA family EYD00_12845 PF04102 SlyX EYD00_12855 PF01556 DnaJ C terminal domain EYD00_12855 PF00226 DnaJ domain EYD00_12855 PF00684 DnaJ central domain EYD00_12860 PF00012 Hsp70 protein EYD00_12875 PF01625 Peptide methionine sulfoxide reductase EYD00_12900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EYD00_12905 PF01048 Phosphorylase superfamily EYD00_12910 PF01791 DeoC/LacD family aldolase EYD00_12915 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EYD00_12915 PF00591 Glycosyl transferase family, a/b domain EYD00_12915 PF02885 Glycosyl transferase family, helical bundle domain EYD00_12930 PF00962 Adenosine/AMP deaminase EYD00_12935 PF01676 Metalloenzyme superfamily EYD00_12945 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EYD00_12950 PF00510 Cytochrome c oxidase subunit III EYD00_12955 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD00_12960 PF06481 COX Aromatic Rich Motif EYD00_12960 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EYD00_12965 PF00083 Sugar (and other) transporter EYD00_12965 PF07690 Major Facilitator Superfamily EYD00_12970 PF01645 Conserved region in glutamate synthase EYD00_12970 PF01493 GXGXG motif EYD00_12970 PF04898 Glutamate synthase central domain EYD00_12970 PF00310 Glutamine amidotransferases class-II EYD00_12975 PF00175 Oxidoreductase NAD-binding domain EYD00_12975 PF00258 Flavodoxin EYD00_12975 PF00667 FAD binding domain EYD00_12995 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_12995 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_13000 PF07977 FabA-like domain EYD00_13015 PF03458 UPF0126 domain EYD00_13025 PF06912 Protein of unknown function (DUF1275) EYD00_13035 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13040 PF00005 ABC transporter EYD00_13045 PF00392 Bacterial regulatory proteins, gntR family EYD00_13045 PF07702 UTRA domain EYD00_13050 PF01618 MotA/TolQ/ExbB proton channel family EYD00_13055 PF02472 Biopolymer transport protein ExbD/TolR EYD00_13065 PF02615 Malate/L-lactate dehydrogenase EYD00_13080 PF00625 Guanylate kinase EYD00_13085 PF07969 Amidohydrolase family EYD00_13090 PF06299 Protein of unknown function (DUF1045) EYD00_13095 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13100 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13110 PF00005 ABC transporter EYD00_13115 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_13120 PF00005 ABC transporter EYD00_13125 PF00005 ABC transporter EYD00_13130 PF06007 Phosphonate metabolism protein PhnJ EYD00_13135 PF05861 Bacterial phosphonate metabolism protein (PhnI) EYD00_13140 PF05845 Bacterial phosphonate metabolism protein (PhnH) EYD00_13145 PF06754 Phosphonate metabolism protein PhnG EYD00_13150 PF07702 UTRA domain EYD00_13150 PF00392 Bacterial regulatory proteins, gntR family EYD00_13155 PF01113 Dihydrodipicolinate reductase, N-terminus EYD00_13155 PF05173 Dihydrodipicolinate reductase, C-terminus EYD00_13160 PF02685 Glucokinase EYD00_13165 PF02142 MGS-like domain EYD00_13170 PF03411 Penicillin-insensitive murein endopeptidase EYD00_13175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_13180 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13185 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_13185 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_13190 PF00005 ABC transporter EYD00_13195 PF01266 FAD dependent oxidoreductase EYD00_13200 PF00120 Glutamine synthetase, catalytic domain EYD00_13205 PF01266 FAD dependent oxidoreductase EYD00_13215 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13220 PF00005 ABC transporter EYD00_13225 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYD00_13240 PF02082 Transcriptional regulator EYD00_13245 PF13416 Bacterial extracellular solute-binding protein EYD00_13250 PF00171 Aldehyde dehydrogenase family EYD00_13255 PF03466 LysR substrate binding domain EYD00_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_13260 PF00892 EamA-like transporter family EYD00_13275 PF00877 NlpC/P60 family EYD00_13285 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EYD00_13285 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EYD00_13290 PF02789 Cytosol aminopeptidase family, N-terminal domain EYD00_13290 PF00883 Cytosol aminopeptidase family, catalytic domain EYD00_13310 PF00437 Type II/IV secretion system protein EYD00_13325 PF04972 BON domain EYD00_13325 PF00263 Bacterial type II and III secretion system protein EYD00_13325 PF13629 Pilus formation protein N terminal region EYD00_13370 PF07411 Domain of unknown function (DUF1508) EYD00_13375 PF01183 Glycosyl hydrolases family 25 EYD00_13380 PF00892 EamA-like transporter family EYD00_13385 PF00155 Aminotransferase class I and II EYD00_13385 PF00392 Bacterial regulatory proteins, gntR family EYD00_13415 PF03144 Elongation factor Tu domain 2 EYD00_13415 PF00679 Elongation factor G C-terminus EYD00_13415 PF06421 GTP-binding protein LepA C-terminus EYD00_13415 PF00009 Elongation factor Tu GTP binding domain EYD00_13420 PF00795 Carbon-nitrogen hydrolase EYD00_13450 PF12833 Helix-turn-helix domain EYD00_13450 PF02311 AraC-like ligand binding domain EYD00_13455 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_13480 PF05198 Translation initiation factor IF-3, N-terminal domain EYD00_13480 PF00707 Translation initiation factor IF-3, C-terminal domain EYD00_13485 PF01632 Ribosomal protein L35 EYD00_13490 PF00453 Ribosomal protein L20 EYD00_13500 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EYD00_13500 PF01409 tRNA synthetases class II core domain (F) EYD00_13505 PF03483 B3/4 domain EYD00_13505 PF01588 Putative tRNA binding domain EYD00_13505 PF03147 Ferredoxin-fold anticodon binding domain EYD00_13505 PF03484 tRNA synthetase B5 domain EYD00_13505 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EYD00_13510 PF00248 Aldo/keto reductase family EYD00_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_13515 PF03466 LysR substrate binding domain EYD00_13530 PF01965 DJ-1/PfpI family EYD00_13530 PF12833 Helix-turn-helix domain EYD00_13540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_13540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_13555 PF13742 OB-fold nucleic acid binding domain EYD00_13555 PF02601 Exonuclease VII, large subunit EYD00_13560 PF13378 Enolase C-terminal domain-like EYD00_13560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_13565 PF00392 Bacterial regulatory proteins, gntR family EYD00_13565 PF07729 FCD domain EYD00_13570 PF01047 MarR family EYD00_13575 PF00892 EamA-like transporter family EYD00_13580 PF02073 Thermophilic metalloprotease (M29) EYD00_13585 PF04073 Aminoacyl-tRNA editing domain EYD00_13590 PF03960 ArsC family EYD00_13615 PF00117 Glutamine amidotransferase class-I EYD00_13615 PF00958 GMP synthase C terminal domain EYD00_13630 PF03073 TspO/MBR family EYD00_13655 PF01189 16S rRNA methyltransferase RsmB/F EYD00_13655 PF01029 NusB family EYD00_13660 PF03330 Lytic transglycolase EYD00_13670 PF08331 Domain of unknown function (DUF1730) EYD00_13675 PF13417 Glutathione S-transferase, N-terminal domain EYD00_13675 PF00043 Glutathione S-transferase, C-terminal domain EYD00_13680 PF02673 Bacitracin resistance protein BacA EYD00_13705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EYD00_13715 PF13649 Methyltransferase domain EYD00_13720 PF02767 DNA polymerase III beta subunit, central domain EYD00_13720 PF00712 DNA polymerase III beta subunit, N-terminal domain EYD00_13720 PF02768 DNA polymerase III beta subunit, C-terminal domain EYD00_13725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_13730 PF02021 Uncharacterised protein family UPF0102 EYD00_13735 PF12464 Maltose acetyltransferase EYD00_13735 PF14602 Hexapeptide repeat of succinyl-transferase EYD00_13740 PF13416 Bacterial extracellular solute-binding protein EYD00_13745 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13750 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_13755 PF00005 ABC transporter EYD00_13765 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EYD00_13765 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EYD00_13770 PF01078 Magnesium chelatase, subunit ChlI EYD00_13770 PF13335 Magnesium chelatase, subunit ChlI C-terminal EYD00_13775 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_13780 PF01810 LysE type translocator EYD00_13785 PF00692 dUTPase EYD00_13790 PF00009 Elongation factor Tu GTP binding domain EYD00_13790 PF03144 Elongation factor Tu domain 2 EYD00_13790 PF16658 Class II release factor RF3, C-terminal domain EYD00_13795 PF02441 Flavoprotein EYD00_13795 PF04127 DNA / pantothenate metabolism flavoprotein EYD00_13810 PF03109 ABC1 family EYD00_13815 PF01209 ubiE/COQ5 methyltransferase family EYD00_13820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EYD00_13820 PF06827 Zinc finger found in FPG and IleRS EYD00_13820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EYD00_13825 PF00378 Enoyl-CoA hydratase/isomerase EYD00_13830 PF01649 Ribosomal protein S20 EYD00_13845 PF02534 Type IV secretory system Conjugative DNA transfer EYD00_13860 PF01548 Transposase EYD00_13860 PF02371 Transposase IS116/IS110/IS902 family EYD00_13885 PF00692 dUTPase EYD00_13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_13935 PF00512 His Kinase A (phospho-acceptor) domain EYD00_13960 PF03852 DNA mismatch endonuclease Vsr EYD00_13965 PF00145 C-5 cytosine-specific DNA methylase EYD00_13965 PF18284 DNA methylase N-terminal domain EYD00_13990 PF01965 DJ-1/PfpI family EYD00_13995 PF12833 Helix-turn-helix domain EYD00_13995 PF01965 DJ-1/PfpI family EYD00_14015 PF00664 ABC transporter transmembrane region EYD00_14015 PF00005 ABC transporter EYD00_14075 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_14085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_14085 PF00672 HAMP domain EYD00_14090 PF00330 Aconitase family (aconitate hydratase) EYD00_14090 PF06434 Aconitate hydratase 2 N-terminus EYD00_14090 PF11791 Aconitate B N-terminal domain EYD00_14095 PF00860 Permease family EYD00_14100 PF00144 Beta-lactamase EYD00_14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_14105 PF03466 LysR substrate binding domain EYD00_14115 PF01177 Asp/Glu/Hydantoin racemase EYD00_14120 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14125 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14135 PF00005 ABC transporter EYD00_14135 PF08402 TOBE domain EYD00_14140 PF00005 ABC transporter EYD00_14150 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14155 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_14160 PF00392 Bacterial regulatory proteins, gntR family EYD00_14160 PF07729 FCD domain EYD00_14180 PF13426 PAS domain EYD00_14180 PF08447 PAS fold EYD00_14180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_14195 PF13416 Bacterial extracellular solute-binding protein EYD00_14200 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14205 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14210 PF17912 MalK OB fold domain EYD00_14210 PF00005 ABC transporter EYD00_14215 PF00296 Luciferase-like monooxygenase EYD00_14220 PF09084 NMT1/THI5 like EYD00_14225 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14230 PF00005 ABC transporter EYD00_14235 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14240 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14250 PF00005 ABC transporter EYD00_14250 PF17912 MalK OB fold domain EYD00_14255 PF06964 Alpha-L-arabinofuranosidase C-terminal domain EYD00_14270 PF00356 Bacterial regulatory proteins, lacI family EYD00_14280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_14280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_14300 PF17912 MalK OB fold domain EYD00_14300 PF00005 ABC transporter EYD00_14300 PF03459 TOBE domain EYD00_14305 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14310 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14315 PF13416 Bacterial extracellular solute-binding protein EYD00_14320 PF17938 Tetracyclin repressor-like, C-terminal domain EYD00_14320 PF00440 Bacterial regulatory proteins, tetR family EYD00_14325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_14325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_14340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_14340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_14345 PF00313 'Cold-shock' DNA-binding domain EYD00_14355 PF01165 Ribosomal protein S21 EYD00_14380 PF00550 Phosphopantetheine attachment site EYD00_14385 PF07470 Glycosyl Hydrolase Family 88 EYD00_14390 PF00295 Glycosyl hydrolases family 28 EYD00_14405 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14410 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14415 PF12833 Helix-turn-helix domain EYD00_14415 PF02311 AraC-like ligand binding domain EYD00_14420 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_14430 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_14435 PF04909 Amidohydrolase EYD00_14440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_14440 PF13378 Enolase C-terminal domain-like EYD00_14445 PF00701 Dihydrodipicolinate synthetase family EYD00_14455 PF04962 KduI/IolB family EYD00_14460 PF01370 NAD dependent epimerase/dehydratase family EYD00_14465 PF00392 Bacterial regulatory proteins, gntR family EYD00_14465 PF07729 FCD domain EYD00_14480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_14480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_14485 PF17912 MalK OB fold domain EYD00_14485 PF00005 ABC transporter EYD00_14490 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14495 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14500 PF13416 Bacterial extracellular solute-binding protein EYD00_14515 PF07690 Major Facilitator Superfamily EYD00_14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_14520 PF03466 LysR substrate binding domain EYD00_14525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_14535 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_14540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD00_14540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_14555 PF00356 Bacterial regulatory proteins, lacI family EYD00_14560 PF01297 Zinc-uptake complex component A periplasmic EYD00_14565 PF00950 ABC 3 transport family EYD00_14570 PF00005 ABC transporter EYD00_14575 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD00_14575 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD00_14590 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD00_14590 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD00_14595 PF13416 Bacterial extracellular solute-binding protein EYD00_14600 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14605 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14610 PF08402 TOBE domain EYD00_14610 PF00005 ABC transporter EYD00_14615 PF13847 Methyltransferase domain EYD00_14625 PF03922 OmpW family EYD00_14645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYD00_14645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYD00_14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_14650 PF03466 LysR substrate binding domain EYD00_14655 PF13407 Periplasmic binding protein domain EYD00_14660 PF02653 Branched-chain amino acid transport system / permease component EYD00_14665 PF00005 ABC transporter EYD00_14670 PF08361 MAATS-type transcriptional repressor, C-terminal region EYD00_14670 PF00440 Bacterial regulatory proteins, tetR family EYD00_14675 PF00873 AcrB/AcrD/AcrF family EYD00_14680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_14680 PF00529 HlyD membrane-fusion protein of T1SS EYD00_14685 PF17151 Periplasmic sensor domain EYD00_14685 PF00990 Diguanylate cyclase, GGDEF domain EYD00_14690 PF05899 Protein of unknown function (DUF861) EYD00_14690 PF07883 Cupin domain EYD00_14700 PF13188 PAS domain EYD00_14700 PF00563 EAL domain EYD00_14700 PF00990 Diguanylate cyclase, GGDEF domain EYD00_14700 PF03707 Bacterial signalling protein N terminal repeat EYD00_14705 PF02615 Malate/L-lactate dehydrogenase EYD00_14710 PF00356 Bacterial regulatory proteins, lacI family EYD00_14720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_14720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_14725 PF01261 Xylose isomerase-like TIM barrel EYD00_14730 PF13407 Periplasmic binding protein domain EYD00_14740 PF00356 Bacterial regulatory proteins, lacI family EYD00_14750 PF02803 Thiolase, C-terminal domain EYD00_14750 PF00108 Thiolase, N-terminal domain EYD00_14755 PF01144 Coenzyme A transferase EYD00_14760 PF01144 Coenzyme A transferase EYD00_14765 PF09339 IclR helix-turn-helix domain EYD00_14765 PF01614 Bacterial transcriptional regulator EYD00_14775 PF01494 FAD binding domain EYD00_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_14780 PF03466 LysR substrate binding domain EYD00_14790 PF02627 Carboxymuconolactone decarboxylase family EYD00_14795 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EYD00_14795 PF00775 Dioxygenase EYD00_14800 PF00775 Dioxygenase EYD00_14805 PF00206 Lyase EYD00_14805 PF10397 Adenylosuccinate lyase C-terminus EYD00_14810 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14815 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14820 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_14825 PF00005 ABC transporter EYD00_14830 PF08501 Shikimate dehydrogenase substrate binding domain EYD00_14830 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EYD00_14835 PF01220 Dehydroquinase class II EYD00_14845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_14855 PF00005 ABC transporter EYD00_14855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_14860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_14865 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14870 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_14870 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_14885 PF13458 Periplasmic binding protein EYD00_14900 PF00005 ABC transporter EYD00_14900 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD00_14905 PF00005 ABC transporter EYD00_14915 PF00294 pfkB family carbohydrate kinase EYD00_14920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EYD00_14920 PF00205 Thiamine pyrophosphate enzyme, central domain EYD00_14920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EYD00_14925 PF01261 Xylose isomerase-like TIM barrel EYD00_14930 PF04962 KduI/IolB family EYD00_14935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_14935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_14940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_14940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_14945 PF00356 Bacterial regulatory proteins, lacI family EYD00_14950 PF01047 MarR family EYD00_14955 PF02633 Creatinine amidohydrolase EYD00_14960 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD00_14960 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD00_14985 PF13505 Outer membrane protein beta-barrel domain EYD00_15005 PF03824 High-affinity nickel-transport protein EYD00_15025 PF01081 KDPG and KHG aldolase EYD00_15045 PF03707 Bacterial signalling protein N terminal repeat EYD00_15045 PF00990 Diguanylate cyclase, GGDEF domain EYD00_15045 PF00563 EAL domain EYD00_15045 PF13188 PAS domain EYD00_15050 PF03180 NLPA lipoprotein EYD00_15055 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15060 PF09383 NIL domain EYD00_15060 PF00005 ABC transporter EYD00_15065 PF00881 Nitroreductase family EYD00_15075 PF00232 Glycosyl hydrolase family 1 EYD00_15085 PF01261 Xylose isomerase-like TIM barrel EYD00_15095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD00_15095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD00_15100 PF00356 Bacterial regulatory proteins, lacI family EYD00_15100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EYD00_15105 PF07690 Major Facilitator Superfamily EYD00_15110 PF13533 Biotin-lipoyl like EYD00_15115 PF00440 Bacterial regulatory proteins, tetR family EYD00_15120 PF03741 Integral membrane protein TerC family EYD00_15120 PF03471 Transporter associated domain EYD00_15130 PF03600 Citrate transporter EYD00_15130 PF02080 TrkA-C domain EYD00_15135 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYD00_15140 PF01336 OB-fold nucleic acid binding domain EYD00_15140 PF00152 tRNA synthetases class II (D, K and N) EYD00_15150 PF01297 Zinc-uptake complex component A periplasmic EYD00_15155 PF00005 ABC transporter EYD00_15160 PF00950 ABC 3 transport family EYD00_15165 PF00950 ABC 3 transport family EYD00_15180 PF09339 IclR helix-turn-helix domain EYD00_15180 PF01614 Bacterial transcriptional regulator EYD00_15185 PF00923 Transaldolase/Fructose-6-phosphate aldolase EYD00_15190 PF13936 Helix-turn-helix domain EYD00_15190 PF04198 Putative sugar-binding domain EYD00_15195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD00_15195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD00_15205 PF10576 Iron-sulfur binding domain of endonuclease III EYD00_15205 PF00633 Helix-hairpin-helix motif EYD00_15205 PF00730 HhH-GPD superfamily base excision DNA repair protein EYD00_15220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD00_15220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD00_15225 PF13419 Haloacid dehalogenase-like hydrolase EYD00_15230 PF08125 Mannitol dehydrogenase C-terminal domain EYD00_15230 PF01232 Mannitol dehydrogenase Rossmann domain EYD00_15235 PF08402 TOBE domain EYD00_15235 PF00005 ABC transporter EYD00_15240 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15255 PF04198 Putative sugar-binding domain EYD00_15260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15260 PF00005 ABC transporter EYD00_15265 PF01546 Peptidase family M20/M25/M40 EYD00_15265 PF07687 Peptidase dimerisation domain EYD00_15270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15275 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15280 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_15280 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15290 PF01965 DJ-1/PfpI family EYD00_15295 PF01425 Amidase EYD00_15300 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_15300 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15305 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_15315 PF03466 LysR substrate binding domain EYD00_15320 PF00005 ABC transporter EYD00_15320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15325 PF00005 ABC transporter EYD00_15325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15335 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15345 PF01244 Membrane dipeptidase (Peptidase family M19) EYD00_15350 PF00156 Phosphoribosyl transferase domain EYD00_15355 PF07687 Peptidase dimerisation domain EYD00_15355 PF01546 Peptidase family M20/M25/M40 EYD00_15360 PF03796 DnaB-like helicase C terminal domain EYD00_15365 PF13382 Adenine deaminase C-terminal domain EYD00_15365 PF01979 Amidohydrolase family EYD00_15375 PF00005 ABC transporter EYD00_15375 PF08402 TOBE domain EYD00_15385 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15395 PF00356 Bacterial regulatory proteins, lacI family EYD00_15400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_15400 PF03466 LysR substrate binding domain EYD00_15405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_15405 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_15405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_15410 PF07715 TonB-dependent Receptor Plug Domain EYD00_15425 PF00005 ABC transporter EYD00_15430 PF01032 FecCD transport family EYD00_15435 PF01032 FecCD transport family EYD00_15445 PF08021 Siderophore-interacting FAD-binding domain EYD00_15445 PF04954 Siderophore-interacting protein EYD00_15455 PF00975 Thioesterase domain EYD00_15455 PF13193 AMP-binding enzyme C-terminal domain EYD00_15455 PF00501 AMP-binding enzyme EYD00_15455 PF00668 Condensation domain EYD00_15455 PF00550 Phosphopantetheine attachment site EYD00_15460 PF00975 Thioesterase domain EYD00_15460 PF00550 Phosphopantetheine attachment site EYD00_15460 PF00501 AMP-binding enzyme EYD00_15460 PF00668 Condensation domain EYD00_15465 PF00501 AMP-binding enzyme EYD00_15465 PF00550 Phosphopantetheine attachment site EYD00_15465 PF00668 Condensation domain EYD00_15465 PF13193 AMP-binding enzyme C-terminal domain EYD00_15470 PF00425 chorismate binding enzyme EYD00_15475 PF00501 AMP-binding enzyme EYD00_15475 PF13193 AMP-binding enzyme C-terminal domain EYD00_15480 PF00857 Isochorismatase family EYD00_15480 PF00550 Phosphopantetheine attachment site EYD00_15490 PF01648 4'-phosphopantetheinyl transferase superfamily EYD00_15490 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EYD00_15500 PF03466 LysR substrate binding domain EYD00_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_15510 PF00005 ABC transporter EYD00_15515 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_15520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_15520 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EYD00_15530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15535 PF00881 Nitroreductase family EYD00_15550 PF01323 DSBA-like thioredoxin domain EYD00_15555 PF01565 FAD binding domain EYD00_15555 PF02913 FAD linked oxidases, C-terminal domain EYD00_15570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15575 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15580 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15580 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_15585 PF00005 ABC transporter EYD00_15585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15595 PF00296 Luciferase-like monooxygenase EYD00_15600 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EYD00_15605 PF03358 NADPH-dependent FMN reductase EYD00_15635 PF00529 HlyD membrane-fusion protein of T1SS EYD00_15635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_15640 PF00005 ABC transporter EYD00_15640 PF00664 ABC transporter transmembrane region EYD00_15645 PF00171 Aldehyde dehydrogenase family EYD00_15655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_15655 PF03466 LysR substrate binding domain EYD00_15660 PF00034 Cytochrome c EYD00_15670 PF05199 GMC oxidoreductase EYD00_15670 PF00732 GMC oxidoreductase EYD00_15680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_15680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_15690 PF00356 Bacterial regulatory proteins, lacI family EYD00_15695 PF02653 Branched-chain amino acid transport system / permease component EYD00_15700 PF02653 Branched-chain amino acid transport system / permease component EYD00_15705 PF00005 ABC transporter EYD00_15710 PF13407 Periplasmic binding protein domain EYD00_15720 PF00551 Formyl transferase EYD00_15730 PF01571 Aminomethyltransferase folate-binding domain EYD00_15730 PF17806 Sarcosine oxidase A3 domain EYD00_15730 PF08669 Glycine cleavage T-protein C-terminal barrel domain EYD00_15730 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_15740 PF01266 FAD dependent oxidoreductase EYD00_15755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD00_15755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD00_15760 PF17806 Sarcosine oxidase A3 domain EYD00_15760 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_15765 PF01266 FAD dependent oxidoreductase EYD00_15765 PF04324 BFD-like [2Fe-2S] binding domain EYD00_15770 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15775 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15780 PF08402 TOBE domain EYD00_15780 PF00005 ABC transporter EYD00_15795 PF00795 Carbon-nitrogen hydrolase EYD00_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_15800 PF03466 LysR substrate binding domain EYD00_15805 PF00072 Response regulator receiver domain EYD00_15805 PF00196 Bacterial regulatory proteins, luxR family EYD00_15810 PF05532 CsbD-like EYD00_15825 PF01266 FAD dependent oxidoreductase EYD00_15840 PF00202 Aminotransferase class-III EYD00_15850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15855 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15860 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15860 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_15865 PF00005 ABC transporter EYD00_15865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15870 PF01037 Lrp/AsnC ligand binding domain EYD00_15875 PF01266 FAD dependent oxidoreductase EYD00_15890 PF00005 ABC transporter EYD00_15900 PF01546 Peptidase family M20/M25/M40 EYD00_15900 PF07687 Peptidase dimerisation domain EYD00_15905 PF00296 Luciferase-like monooxygenase EYD00_15910 PF00296 Luciferase-like monooxygenase EYD00_15915 PF02082 Transcriptional regulator EYD00_15925 PF01613 Flavin reductase like domain EYD00_15930 PF00296 Luciferase-like monooxygenase EYD00_15945 PF00296 Luciferase-like monooxygenase EYD00_15950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_15950 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_15950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_15960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_15965 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15970 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_15975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15975 PF00005 ABC transporter EYD00_15980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_15980 PF00005 ABC transporter EYD00_15985 PF00248 Aldo/keto reductase family EYD00_15995 PF03466 LysR substrate binding domain EYD00_15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_16005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_16015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_16020 PF01546 Peptidase family M20/M25/M40 EYD00_16020 PF07687 Peptidase dimerisation domain EYD00_16025 PF00296 Luciferase-like monooxygenase EYD00_16030 PF05368 NmrA-like family EYD00_16040 PF00296 Luciferase-like monooxygenase EYD00_16045 PF00296 Luciferase-like monooxygenase EYD00_16050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_16050 PF13378 Enolase C-terminal domain-like EYD00_16060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_16065 PF00005 ABC transporter EYD00_16065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_16070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_16070 PF00005 ABC transporter EYD00_16075 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_16075 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_16080 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_16090 PF07729 FCD domain EYD00_16090 PF00392 Bacterial regulatory proteins, gntR family EYD00_16100 PF00561 alpha/beta hydrolase fold EYD00_16105 PF00106 short chain dehydrogenase EYD00_16115 PF00753 Metallo-beta-lactamase superfamily EYD00_16115 PF04273 Putative phosphatase (DUF442) EYD00_16125 PF04143 Sulphur transport EYD00_16135 PF01676 Metalloenzyme superfamily EYD00_16135 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EYD00_16150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EYD00_16150 PF02817 e3 binding domain EYD00_16150 PF00364 Biotin-requiring enzyme EYD00_16155 PF02779 Transketolase, pyrimidine binding domain EYD00_16155 PF02780 Transketolase, C-terminal domain EYD00_16160 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal EYD00_16160 PF00676 Dehydrogenase E1 component EYD00_16165 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_16165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_16165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_16170 PF01037 Lrp/AsnC ligand binding domain EYD00_16175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EYD00_16175 PF02770 Acyl-CoA dehydrogenase, middle domain EYD00_16175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EYD00_16180 PF01039 Carboxyl transferase domain EYD00_16185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD00_16185 PF00364 Biotin-requiring enzyme EYD00_16185 PF00289 Biotin carboxylase, N-terminal domain EYD00_16185 PF02785 Biotin carboxylase C-terminal domain EYD00_16190 PF00682 HMGL-like EYD00_16195 PF00378 Enoyl-CoA hydratase/isomerase EYD00_16200 PF02569 Pantoate-beta-alanine ligase EYD00_16205 PF02548 Ketopantoate hydroxymethyltransferase EYD00_16210 PF01261 Xylose isomerase-like TIM barrel EYD00_16215 PF00596 Class II Aldolase and Adducin N-terminal domain EYD00_16220 PF08220 DeoR-like helix-turn-helix domain EYD00_16220 PF00455 DeoR C terminal sensor domain EYD00_16225 PF13407 Periplasmic binding protein domain EYD00_16235 PF00005 ABC transporter EYD00_16240 PF02653 Branched-chain amino acid transport system / permease component EYD00_16245 PF02653 Branched-chain amino acid transport system / permease component EYD00_16250 PF05336 L-rhamnose mutarotase EYD00_16260 PF00561 alpha/beta hydrolase fold EYD00_16270 PF08448 PAS fold EYD00_16270 PF08447 PAS fold EYD00_16270 PF00990 Diguanylate cyclase, GGDEF domain EYD00_16270 PF00563 EAL domain EYD00_16280 PF00171 Aldehyde dehydrogenase family EYD00_16285 PF08713 DNA alkylation repair enzyme EYD00_16290 PF00005 ABC transporter EYD00_16295 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_16300 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_16310 PF00378 Enoyl-CoA hydratase/isomerase EYD00_16325 PF08241 Methyltransferase domain EYD00_16335 PF00795 Carbon-nitrogen hydrolase EYD00_16340 PF00462 Glutaredoxin EYD00_16345 PF00156 Phosphoribosyl transferase domain EYD00_16350 PF08241 Methyltransferase domain EYD00_16365 PF00293 NUDIX domain EYD00_16370 PF13508 Acetyltransferase (GNAT) domain EYD00_16370 PF00583 Acetyltransferase (GNAT) family EYD00_16375 PF01960 ArgJ family EYD00_16385 PF07516 SecA Wing and Scaffold domain EYD00_16385 PF02810 SEC-C motif EYD00_16385 PF07517 SecA DEAD-like domain EYD00_16385 PF01043 SecA preprotein cross-linking domain EYD00_16390 PF00892 EamA-like transporter family EYD00_16395 PF01757 Acyltransferase family EYD00_16450 PF00535 Glycosyl transferase family 2 EYD00_16455 PF01943 Polysaccharide biosynthesis protein EYD00_16460 PF00534 Glycosyl transferases group 1 EYD00_16460 PF13579 Glycosyl transferase 4-like domain EYD00_16475 PF01757 Acyltransferase family EYD00_16485 PF02706 Chain length determinant protein EYD00_16485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD00_16485 PF13807 G-rich domain on putative tyrosine kinase EYD00_16500 PF00534 Glycosyl transferases group 1 EYD00_16500 PF08323 Starch synthase catalytic domain EYD00_16505 PF00534 Glycosyl transferases group 1 EYD00_16505 PF13439 Glycosyltransferase Family 4 EYD00_16510 PF00534 Glycosyl transferases group 1 EYD00_16510 PF13439 Glycosyltransferase Family 4 EYD00_16530 PF00722 Glycosyl hydrolases family 16 EYD00_16530 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) EYD00_16560 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EYD00_16575 PF01381 Helix-turn-helix EYD00_16585 PF00005 ABC transporter EYD00_16590 PF02653 Branched-chain amino acid transport system / permease component EYD00_16595 PF13407 Periplasmic binding protein domain EYD00_16605 PF01266 FAD dependent oxidoreductase EYD00_16605 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EYD00_16620 PF00364 Biotin-requiring enzyme EYD00_16620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD00_16620 PF00289 Biotin carboxylase, N-terminal domain EYD00_16620 PF02785 Biotin carboxylase C-terminal domain EYD00_16625 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family EYD00_16635 PF02798 Glutathione S-transferase, N-terminal domain EYD00_16640 PF01039 Carboxyl transferase domain EYD00_16645 PF01381 Helix-turn-helix EYD00_16645 PF06114 IrrE N-terminal-like domain EYD00_16645 PF09856 Predicted transcriptional regulator (DUF2083) EYD00_16650 PF06029 AlkA N-terminal domain EYD00_16650 PF02805 Metal binding domain of Ada EYD00_16650 PF00730 HhH-GPD superfamily base excision DNA repair protein EYD00_16650 PF12833 Helix-turn-helix domain EYD00_16655 PF00749 tRNA synthetases class I (E and Q), catalytic domain EYD00_16665 PF00106 short chain dehydrogenase EYD00_16675 PF01923 Cobalamin adenosyltransferase EYD00_16685 PF01012 Electron transfer flavoprotein domain EYD00_16690 PF00766 Electron transfer flavoprotein FAD-binding domain EYD00_16690 PF01012 Electron transfer flavoprotein domain EYD00_16695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EYD00_16695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EYD00_16700 PF08534 Redoxin EYD00_16705 PF14698 Argininosuccinate lyase C-terminal EYD00_16705 PF00206 Lyase EYD00_16715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EYD00_16715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYD00_16725 PF00072 Response regulator receiver domain EYD00_16730 PF00156 Phosphoribosyl transferase domain EYD00_16740 PF00005 ABC transporter EYD00_16760 PF04752 ChaC-like protein EYD00_16770 PF02153 Prephenate dehydrogenase EYD00_16775 PF00155 Aminotransferase class I and II EYD00_16780 PF01209 ubiE/COQ5 methyltransferase family EYD00_16785 PF16123 Hydroxyacylglutathione hydrolase C-terminus EYD00_16785 PF00753 Metallo-beta-lactamase superfamily EYD00_16800 PF00830 Ribosomal L28 family EYD00_16805 PF02592 Putative vitamin uptake transporter EYD00_16820 PF06213 Cobalamin biosynthesis protein CobT EYD00_16820 PF11775 Cobalamin biosynthesis protein CobT VWA domain EYD00_16825 PF12556 Cobaltochelatase CobS subunit N terminal EYD00_16825 PF07728 AAA domain (dynein-related subfamily) EYD00_16825 PF08406 CbbQ/NirQ/NorQ C-terminal EYD00_16830 PF00226 DnaJ domain EYD00_16835 PF01722 BolA-like protein EYD00_16840 PF01761 3-dehydroquinate synthase EYD00_16845 PF01202 Shikimate kinase EYD00_16860 PF02899 Phage integrase, N-terminal SAM-like domain EYD00_16860 PF00589 Phage integrase family EYD00_16865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EYD00_16870 PF03734 L,D-transpeptidase catalytic domain EYD00_16875 PF01206 Sulfurtransferase TusA EYD00_16875 PF00581 Rhodanese-like domain EYD00_16880 PF07683 Cobalamin synthesis protein cobW C-terminal domain EYD00_16880 PF02492 CobW/HypB/UreG, nucleotide-binding domain EYD00_16885 PF00768 D-alanyl-D-alanine carboxypeptidase EYD00_16885 PF07943 Penicillin-binding protein 5, C-terminal domain EYD00_16890 PF01546 Peptidase family M20/M25/M40 EYD00_16890 PF07687 Peptidase dimerisation domain EYD00_16900 PF00905 Penicillin binding protein transpeptidase domain EYD00_16900 PF00912 Transglycosylase EYD00_16900 PF06832 Penicillin-Binding Protein C-terminus Family EYD00_16905 PF07678 A-macroglobulin TED domain EYD00_16905 PF11974 Bacterial alpha-2-macroglobulin MG3 domain EYD00_16905 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain EYD00_16905 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain EYD00_16905 PF07703 Alpha-2-macroglobulin bait region domain EYD00_16905 PF00207 Alpha-2-macroglobulin family EYD00_16905 PF17962 Bacterial macroglobulin domain 6 EYD00_16905 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain EYD00_16905 PF01835 MG2 domain EYD00_16910 PF03966 Trm112p-like protein EYD00_16920 PF00085 Thioredoxin EYD00_16960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_16960 PF01842 ACT domain EYD00_16960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_16970 PF13505 Outer membrane protein beta-barrel domain EYD00_16975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYD00_16975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYD00_16975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYD00_16975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYD00_16980 PF01434 Peptidase family M41 EYD00_16980 PF06480 FtsH Extracellular EYD00_16980 PF17862 AAA+ lid domain EYD00_16980 PF00004 ATPase family associated with various cellular activities (AAA) EYD00_16985 PF01171 PP-loop family EYD00_16995 PF00691 OmpA family EYD00_17000 PF07676 WD40-like Beta Propeller Repeat EYD00_17000 PF04052 TolB amino-terminal domain EYD00_17010 PF02472 Biopolymer transport protein ExbD/TolR EYD00_17015 PF01618 MotA/TolQ/ExbB proton channel family EYD00_17020 PF03061 Thioesterase superfamily EYD00_17025 PF00293 NUDIX domain EYD00_17030 PF00293 NUDIX domain EYD00_17045 PF05496 Holliday junction DNA helicase RuvB P-loop domain EYD00_17045 PF17864 RuvB AAA lid domain EYD00_17045 PF05491 RuvB C-terminal winged helix domain EYD00_17050 PF07499 RuvA, C-terminal domain EYD00_17050 PF01330 RuvA N terminal domain EYD00_17055 PF02075 Crossover junction endodeoxyribonuclease RuvC EYD00_17060 PF00296 Luciferase-like monooxygenase EYD00_17065 PF01709 Transcriptional regulator EYD00_17080 PF13277 YmdB-like protein EYD00_17085 PF01812 5-formyltetrahydrofolate cyclo-ligase family EYD00_17090 PF03471 Transporter associated domain EYD00_17090 PF01595 Cyclin M transmembrane N-terminal domain EYD00_17090 PF00571 CBS domain EYD00_17115 PF02779 Transketolase, pyrimidine binding domain EYD00_17115 PF02780 Transketolase, C-terminal domain EYD00_17115 PF00456 Transketolase, thiamine diphosphate binding domain EYD00_17120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EYD00_17120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EYD00_17125 PF03471 Transporter associated domain EYD00_17125 PF00999 Sodium/hydrogen exchanger family EYD00_17130 PF00162 Phosphoglycerate kinase EYD00_17135 PF00274 Fructose-bisphosphate aldolase class-I EYD00_17155 PF01197 Ribosomal protein L31 EYD00_17160 PF00664 ABC transporter transmembrane region EYD00_17160 PF00005 ABC transporter EYD00_17165 PF00890 FAD binding domain EYD00_17170 PF01389 OmpA-like transmembrane domain EYD00_17170 PF00691 OmpA family EYD00_17180 PF00459 Inositol monophosphatase family EYD00_17210 PF00731 AIR carboxylase EYD00_17215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EYD00_17215 PF02222 ATP-grasp domain EYD00_17220 PF00444 Ribosomal protein L36 EYD00_17230 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) EYD00_17250 PF02887 Pyruvate kinase, alpha/beta domain EYD00_17250 PF00224 Pyruvate kinase, barrel domain EYD00_17255 PF05951 Bacterial protein of unknown function (DUF882) EYD00_17260 PF02954 Bacterial regulatory protein, Fis family EYD00_17260 PF00072 Response regulator receiver domain EYD00_17260 PF00158 Sigma-54 interaction domain EYD00_17265 PF01432 Peptidase family M3 EYD00_17265 PF08439 Oligopeptidase F EYD00_17270 PF01063 Amino-transferase class IV EYD00_17275 PF00072 Response regulator receiver domain EYD00_17275 PF00990 Diguanylate cyclase, GGDEF domain EYD00_17280 PF16653 Saccharopine dehydrogenase C-terminal domain EYD00_17280 PF03435 Saccharopine dehydrogenase NADP binding domain EYD00_17290 PF00149 Calcineurin-like phosphoesterase EYD00_17290 PF02872 5'-nucleotidase, C-terminal domain EYD00_17295 PF00762 Ferrochelatase EYD00_17300 PF16200 C-terminal region of band_7 EYD00_17300 PF01145 SPFH domain / Band 7 family EYD00_17310 PF01380 SIS domain EYD00_17310 PF00571 CBS domain EYD00_17325 PF00483 Nucleotidyl transferase EYD00_17330 PF13406 Transglycosylase SLT domain EYD00_17340 PF00072 Response regulator receiver domain EYD00_17340 PF00486 Transcriptional regulatory protein, C terminal EYD00_17345 PF00672 HAMP domain EYD00_17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_17345 PF00512 His Kinase A (phospho-acceptor) domain EYD00_17350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EYD00_17350 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_17355 PF01493 GXGXG motif EYD00_17355 PF01645 Conserved region in glutamate synthase EYD00_17355 PF04898 Glutamate synthase central domain EYD00_17355 PF00310 Glutamine amidotransferases class-II EYD00_17360 PF01212 Beta-eliminating lyase EYD00_17365 PF00072 Response regulator receiver domain EYD00_17365 PF00486 Transcriptional regulatory protein, C terminal EYD00_17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_17370 PF02702 Osmosensitive K+ channel His kinase sensor domain EYD00_17370 PF13492 GAF domain EYD00_17370 PF13493 Domain of unknown function (DUF4118) EYD00_17370 PF00512 His Kinase A (phospho-acceptor) domain EYD00_17375 PF02669 K+-transporting ATPase, c chain EYD00_17385 PF03814 Potassium-transporting ATPase A subunit EYD00_17395 PF17763 Glutaminase/Asparaginase C-terminal domain EYD00_17395 PF00710 Asparaginase, N-terminal EYD00_17400 PF00324 Amino acid permease EYD00_17405 PF00206 Lyase EYD00_17405 PF10415 Fumarase C C-terminus EYD00_17410 PF00392 Bacterial regulatory proteins, gntR family EYD00_17410 PF07729 FCD domain EYD00_17415 PF00873 AcrB/AcrD/AcrF family EYD00_17420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_17425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_17425 PF00529 HlyD membrane-fusion protein of T1SS EYD00_17430 PF00440 Bacterial regulatory proteins, tetR family EYD00_17435 PF00356 Bacterial regulatory proteins, lacI family EYD00_17440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_17440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_17450 PF13416 Bacterial extracellular solute-binding protein EYD00_17455 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17460 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17465 PF03459 TOBE domain EYD00_17465 PF17912 MalK OB fold domain EYD00_17465 PF00005 ABC transporter EYD00_17470 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17475 PF00005 ABC transporter EYD00_17485 PF04303 PrpF protein EYD00_17490 PF03466 LysR substrate binding domain EYD00_17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_17500 PF01053 Cys/Met metabolism PLP-dependent enzyme EYD00_17505 PF01037 Lrp/AsnC ligand binding domain EYD00_17520 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17525 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17535 PF00535 Glycosyl transferase family 2 EYD00_17535 PF07238 PilZ domain EYD00_17535 PF03552 Cellulose synthase EYD00_17545 PF00158 Sigma-54 interaction domain EYD00_17545 PF00072 Response regulator receiver domain EYD00_17545 PF02954 Bacterial regulatory protein, Fis family EYD00_17550 PF00072 Response regulator receiver domain EYD00_17550 PF08769 Sporulation initiation factor Spo0A C terminal EYD00_17555 PF00512 His Kinase A (phospho-acceptor) domain EYD00_17555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_17555 PF09308 LuxQ, periplasmic EYD00_17555 PF00072 Response regulator receiver domain EYD00_17560 PF00072 Response regulator receiver domain EYD00_17565 PF08447 PAS fold EYD00_17565 PF07536 HWE histidine kinase EYD00_17565 PF13426 PAS domain EYD00_17570 PF00072 Response regulator receiver domain EYD00_17575 PF01590 GAF domain EYD00_17575 PF00360 Phytochrome region EYD00_17575 PF08446 PAS fold EYD00_17575 PF00512 His Kinase A (phospho-acceptor) domain EYD00_17575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_17590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EYD00_17590 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_17635 PF13426 PAS domain EYD00_17635 PF07536 HWE histidine kinase EYD00_17635 PF13581 Histidine kinase-like ATPase domain EYD00_17660 PF03466 LysR substrate binding domain EYD00_17660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_17670 PF00440 Bacterial regulatory proteins, tetR family EYD00_17670 PF17925 Tetracyclin repressor-like, C-terminal domain EYD00_17675 PF02625 XdhC and CoxI family EYD00_17675 PF13478 XdhC Rossmann domain EYD00_17680 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD00_17680 PF01799 [2Fe-2S] binding domain EYD00_17680 PF10518 TAT (twin-arginine translocation) pathway signal sequence EYD00_17685 PF03450 CO dehydrogenase flavoprotein C-terminal domain EYD00_17685 PF00941 FAD binding domain in molybdopterin dehydrogenase EYD00_17690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD00_17690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD00_17695 PF00682 HMGL-like EYD00_17695 PF08502 LeuA allosteric (dimerisation) domain EYD00_17705 PF12804 MobA-like NTP transferase domain EYD00_17705 PF00132 Bacterial transferase hexapeptide (six repeats) EYD00_17710 PF03466 LysR substrate binding domain EYD00_17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_17715 PF00753 Metallo-beta-lactamase superfamily EYD00_17720 PF00248 Aldo/keto reductase family EYD00_17725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_17725 PF00672 HAMP domain EYD00_17735 PF02080 TrkA-C domain EYD00_17735 PF06826 Predicted Permease Membrane Region EYD00_17740 PF00155 Aminotransferase class I and II EYD00_17745 PF11799 impB/mucB/samB family C-terminal domain EYD00_17745 PF00817 impB/mucB/samB family EYD00_17755 PF00202 Aminotransferase class-III EYD00_17770 PF00005 ABC transporter EYD00_17770 PF08402 TOBE domain EYD00_17775 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17780 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17785 PF00857 Isochorismatase family EYD00_17790 PF08220 DeoR-like helix-turn-helix domain EYD00_17790 PF00455 DeoR C terminal sensor domain EYD00_17795 PF03576 Peptidase family S58 EYD00_17800 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD00_17830 PF01554 MatE EYD00_17845 PF01323 DSBA-like thioredoxin domain EYD00_17850 PF13454 FAD-NAD(P)-binding EYD00_17855 PF08402 TOBE domain EYD00_17855 PF00005 ABC transporter EYD00_17860 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17865 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_17875 PF03466 LysR substrate binding domain EYD00_17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_17885 PF00990 Diguanylate cyclase, GGDEF domain EYD00_17890 PF00158 Sigma-54 interaction domain EYD00_17890 PF02954 Bacterial regulatory protein, Fis family EYD00_17890 PF01590 GAF domain EYD00_17895 PF00107 Zinc-binding dehydrogenase EYD00_17895 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_17915 PF12951 Passenger-associated-transport-repeat EYD00_17920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EYD00_17920 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_17935 PF01497 Periplasmic binding protein EYD00_17940 PF07715 TonB-dependent Receptor Plug Domain EYD00_17940 PF00593 TonB dependent receptor EYD00_17950 PF00005 ABC transporter EYD00_17955 PF01032 FecCD transport family EYD00_17960 PF00561 alpha/beta hydrolase fold EYD00_17965 PF13533 Biotin-lipoyl like EYD00_17985 PF02311 AraC-like ligand binding domain EYD00_17985 PF12833 Helix-turn-helix domain EYD00_17995 PF03466 LysR substrate binding domain EYD00_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18000 PF00753 Metallo-beta-lactamase superfamily EYD00_18020 PF03466 LysR substrate binding domain EYD00_18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18030 PF04945 YHS domain EYD00_18040 PF12951 Passenger-associated-transport-repeat EYD00_18050 PF03466 LysR substrate binding domain EYD00_18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18060 PF00005 ABC transporter EYD00_18060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_18065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_18065 PF00005 ABC transporter EYD00_18070 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_18070 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18075 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_18090 PF00072 Response regulator receiver domain EYD00_18090 PF13426 PAS domain EYD00_18095 PF00072 Response regulator receiver domain EYD00_18100 PF07536 HWE histidine kinase EYD00_18100 PF08447 PAS fold EYD00_18100 PF13426 PAS domain EYD00_18125 PF00196 Bacterial regulatory proteins, luxR family EYD00_18125 PF00072 Response regulator receiver domain EYD00_18165 PF03466 LysR substrate binding domain EYD00_18165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18175 PF00672 HAMP domain EYD00_18175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_18180 PF17151 Periplasmic sensor domain EYD00_18180 PF00990 Diguanylate cyclase, GGDEF domain EYD00_18200 PF01047 MarR family EYD00_18205 PF00106 short chain dehydrogenase EYD00_18215 PF03466 LysR substrate binding domain EYD00_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_18220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_18225 PF01970 Tripartite tricarboxylate transporter TctA family EYD00_18240 PF03737 Aldolase/RraA EYD00_18245 PF01842 ACT domain EYD00_18245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_18245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_18250 PF03466 LysR substrate binding domain EYD00_18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18265 PF07729 FCD domain EYD00_18265 PF00392 Bacterial regulatory proteins, gntR family EYD00_18270 PF00005 ABC transporter EYD00_18270 PF17912 MalK OB fold domain EYD00_18275 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18280 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18285 PF01547 Bacterial extracellular solute-binding protein EYD00_18290 PF07940 Heparinase II/III-like protein EYD00_18290 PF16889 Heparinase II/III N-terminus EYD00_18305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_18305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_18315 PF13378 Enolase C-terminal domain-like EYD00_18315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_18325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD00_18325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD00_18330 PF00941 FAD binding domain in molybdopterin dehydrogenase EYD00_18330 PF03450 CO dehydrogenase flavoprotein C-terminal domain EYD00_18335 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD00_18335 PF01799 [2Fe-2S] binding domain EYD00_18335 PF10518 TAT (twin-arginine translocation) pathway signal sequence EYD00_18345 PF01261 Xylose isomerase-like TIM barrel EYD00_18350 PF00485 Phosphoribulokinase / Uridine kinase family EYD00_18355 PF01261 Xylose isomerase-like TIM barrel EYD00_18360 PF02653 Branched-chain amino acid transport system / permease component EYD00_18365 PF02653 Branched-chain amino acid transport system / permease component EYD00_18380 PF00356 Bacterial regulatory proteins, lacI family EYD00_18410 PF01638 HxlR-like helix-turn-helix EYD00_18420 PF00106 short chain dehydrogenase EYD00_18425 PF12833 Helix-turn-helix domain EYD00_18425 PF12852 Cupin EYD00_18480 PF01979 Amidohydrolase family EYD00_18485 PF01979 Amidohydrolase family EYD00_18490 PF00221 Aromatic amino acid lyase EYD00_18500 PF01175 Urocanase Rossmann-like domain EYD00_18500 PF17392 Urocanase C-terminal domain EYD00_18500 PF17391 Urocanase N-terminal domain EYD00_18510 PF05962 HutD EYD00_18515 PF07364 Metallopeptidase family M81 EYD00_18515 PF07171 MlrC C-terminus EYD00_18520 PF14031 Putative serine dehydratase domain EYD00_18520 PF01168 Alanine racemase, N-terminal domain EYD00_18525 PF01042 Endoribonuclease L-PSP EYD00_18535 PF13614 AAA domain EYD00_18540 PF02195 ParB-like nuclease domain EYD00_18540 PF07506 RepB plasmid partitioning protein EYD00_18545 PF11800 Replication protein C C-terminal region EYD00_18545 PF03428 Replication protein C N-terminal domain EYD00_18560 PF06772 Bacterial low temperature requirement A protein (LtrA) EYD00_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18565 PF03466 LysR substrate binding domain EYD00_18570 PF00593 TonB dependent receptor EYD00_18570 PF07715 TonB-dependent Receptor Plug Domain EYD00_18575 PF09278 MerR, DNA binding EYD00_18575 PF00376 MerR family regulatory protein EYD00_18580 PF00128 Alpha amylase, catalytic domain EYD00_18580 PF02806 Alpha amylase, C-terminal all-beta domain EYD00_18585 PF00364 Biotin-requiring enzyme EYD00_18585 PF00289 Biotin carboxylase, N-terminal domain EYD00_18585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EYD00_18585 PF02785 Biotin carboxylase C-terminal domain EYD00_18590 PF02682 Carboxyltransferase domain, subdomain C and D EYD00_18595 PF07286 Protein of unknown function (DUF1445) EYD00_18600 PF03746 LamB/YcsF family EYD00_18605 PF01566 Natural resistance-associated macrophage protein EYD00_18610 PF00392 Bacterial regulatory proteins, gntR family EYD00_18610 PF07729 FCD domain EYD00_18615 PF03861 ANTAR domain EYD00_18615 PF08376 Nitrate and nitrite sensing EYD00_18630 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18635 PF00005 ABC transporter EYD00_18640 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_18640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EYD00_18640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EYD00_18640 PF04324 BFD-like [2Fe-2S] binding domain EYD00_18640 PF18267 Rubredoxin NAD+ reductase C-terminal domain EYD00_18655 PF01568 Molydopterin dinucleotide binding domain EYD00_18655 PF04324 BFD-like [2Fe-2S] binding domain EYD00_18655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD00_18655 PF00384 Molybdopterin oxidoreductase EYD00_18660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EYD00_18660 PF14824 Sirohaem biosynthesis protein central EYD00_18660 PF10414 Sirohaem synthase dimerisation region EYD00_18665 PF08220 DeoR-like helix-turn-helix domain EYD00_18665 PF00455 DeoR C terminal sensor domain EYD00_18670 PF01266 FAD dependent oxidoreductase EYD00_18670 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EYD00_18680 PF17912 MalK OB fold domain EYD00_18680 PF00005 ABC transporter EYD00_18685 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18690 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD00_18705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD00_18710 PF03466 LysR substrate binding domain EYD00_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_18715 PF13593 SBF-like CPA transporter family (DUF4137) EYD00_18720 PF00011 Hsp20/alpha crystallin family EYD00_18730 PF00459 Inositol monophosphatase family EYD00_18740 PF00072 Response regulator receiver domain EYD00_18755 PF00005 ABC transporter EYD00_18760 PF02653 Branched-chain amino acid transport system / permease component EYD00_18770 PF00248 Aldo/keto reductase family EYD00_18775 PF01266 FAD dependent oxidoreductase EYD00_18775 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EYD00_18780 PF01791 DeoC/LacD family aldolase EYD00_18785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD00_18785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD00_18790 PF01047 MarR family EYD00_18800 PF01070 FMN-dependent dehydrogenase EYD00_18805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_18805 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_18810 PF00005 ABC transporter EYD00_18810 PF12848 ABC transporter EYD00_18820 PF08379 Bacterial transglutaminase-like N-terminal region EYD00_18820 PF01841 Transglutaminase-like superfamily EYD00_18825 PF14403 Circularly permuted ATP-grasp type 2 EYD00_18825 PF04168 A predicted alpha-helical domain with a conserved ER motif. EYD00_18850 PF03061 Thioesterase superfamily EYD00_18865 PF07729 FCD domain EYD00_18865 PF00392 Bacterial regulatory proteins, gntR family EYD00_18870 PF00465 Iron-containing alcohol dehydrogenase EYD00_18875 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EYD00_18890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_18895 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_18905 PF00005 ABC transporter EYD00_18910 PF00701 Dihydrodipicolinate synthetase family EYD00_18930 PF00589 Phage integrase family EYD00_18940 PF00239 Resolvase, N terminal domain EYD00_18940 PF02796 Helix-turn-helix domain of resolvase EYD00_18970 PF00005 ABC transporter EYD00_18970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_18975 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18975 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_18980 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_18985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_18990 PF03707 Bacterial signalling protein N terminal repeat EYD00_18990 PF00990 Diguanylate cyclase, GGDEF domain EYD00_18990 PF13188 PAS domain EYD00_18990 PF00563 EAL domain EYD00_19000 PF07238 PilZ domain EYD00_19000 PF00535 Glycosyl transferase family 2 EYD00_19000 PF03552 Cellulose synthase EYD00_19015 PF01544 CorA-like Mg2+ transporter protein EYD00_19020 PF13454 FAD-NAD(P)-binding EYD00_19045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_19050 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19055 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19060 PF00005 ABC transporter EYD00_19060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_19070 PF07687 Peptidase dimerisation domain EYD00_19070 PF01546 Peptidase family M20/M25/M40 EYD00_19080 PF01425 Amidase EYD00_19090 PF01261 Xylose isomerase-like TIM barrel EYD00_19095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_19095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_19100 PF01261 Xylose isomerase-like TIM barrel EYD00_19110 PF00356 Bacterial regulatory proteins, lacI family EYD00_19115 PF00005 ABC transporter EYD00_19120 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19125 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19130 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_19135 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EYD00_19140 PF00557 Metallopeptidase family M24 EYD00_19140 PF01321 Creatinase/Prolidase N-terminal domain EYD00_19145 PF02423 Ornithine cyclodeaminase/mu-crystallin family EYD00_19150 PF00291 Pyridoxal-phosphate dependent enzyme EYD00_19155 PF00392 Bacterial regulatory proteins, gntR family EYD00_19155 PF00155 Aminotransferase class I and II EYD00_19160 PF00202 Aminotransferase class-III EYD00_19165 PF00171 Aldehyde dehydrogenase family EYD00_19170 PF01037 Lrp/AsnC ligand binding domain EYD00_19185 PF03466 LysR substrate binding domain EYD00_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_19190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EYD00_19205 PF07969 Amidohydrolase family EYD00_19225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_19225 PF03466 LysR substrate binding domain EYD00_19230 PF07690 Major Facilitator Superfamily EYD00_19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_19235 PF00512 His Kinase A (phospho-acceptor) domain EYD00_19235 PF00672 HAMP domain EYD00_19240 PF00072 Response regulator receiver domain EYD00_19240 PF00486 Transcriptional regulatory protein, C terminal EYD00_19245 PF01569 PAP2 superfamily EYD00_19260 PF07731 Multicopper oxidase EYD00_19260 PF07732 Multicopper oxidase EYD00_19280 PF13673 Acetyltransferase (GNAT) domain EYD00_19285 PF06968 Biotin and Thiamin Synthesis associated domain EYD00_19285 PF04055 Radical SAM superfamily EYD00_19290 PF00155 Aminotransferase class I and II EYD00_19300 PF00202 Aminotransferase class-III EYD00_19305 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EYD00_19305 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EYD00_19335 PF00491 Arginase family EYD00_19340 PF02423 Ornithine cyclodeaminase/mu-crystallin family EYD00_19345 PF00892 EamA-like transporter family EYD00_19350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_19350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_19360 PF00211 Adenylate and Guanylate cyclase catalytic domain EYD00_19370 PF07756 Protein of unknown function (DUF1612) EYD00_19370 PF11972 HTH DNA binding domain EYD00_19375 PF00083 Sugar (and other) transporter EYD00_19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_19380 PF00512 His Kinase A (phospho-acceptor) domain EYD00_19385 PF00072 Response regulator receiver domain EYD00_19385 PF00486 Transcriptional regulatory protein, C terminal EYD00_19390 PF00884 Sulfatase EYD00_19390 PF08019 Phosphoethanolamine transferase EptA/EptB EYD00_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_19400 PF03466 LysR substrate binding domain EYD00_19405 PF07715 TonB-dependent Receptor Plug Domain EYD00_19405 PF00593 TonB dependent receptor EYD00_19415 PF01032 FecCD transport family EYD00_19420 PF00005 ABC transporter EYD00_19435 PF02631 RecX family EYD00_19440 PF08450 SMP-30/Gluconolactonase/LRE-like region EYD00_19450 PF02653 Branched-chain amino acid transport system / permease component EYD00_19455 PF00005 ABC transporter EYD00_19460 PF13407 Periplasmic binding protein domain EYD00_19470 PF07730 Histidine kinase EYD00_19470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_19475 PF00072 Response regulator receiver domain EYD00_19475 PF00196 Bacterial regulatory proteins, luxR family EYD00_19485 PF07995 Glucose / Sorbosone dehydrogenase EYD00_19495 PF04445 Putative SAM-dependent methyltransferase EYD00_19500 PF00849 RNA pseudouridylate synthase EYD00_19505 PF01205 Uncharacterized protein family UPF0029 EYD00_19510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EYD00_19510 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_19515 PF00571 CBS domain EYD00_19515 PF00005 ABC transporter EYD00_19520 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19530 PF13426 PAS domain EYD00_19530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_19530 PF00072 Response regulator receiver domain EYD00_19535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_19540 PF02706 Chain length determinant protein EYD00_19540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD00_19540 PF13807 G-rich domain on putative tyrosine kinase EYD00_19545 PF00483 Nucleotidyl transferase EYD00_19550 PF00535 Glycosyl transferase family 2 EYD00_19555 PF00535 Glycosyl transferase family 2 EYD00_19560 PF00535 Glycosyl transferase family 2 EYD00_19570 PF00722 Glycosyl hydrolases family 16 EYD00_19575 PF01757 Acyltransferase family EYD00_19580 PF01943 Polysaccharide biosynthesis protein EYD00_19585 PF00535 Glycosyl transferase family 2 EYD00_19590 PF04230 Polysaccharide pyruvyl transferase EYD00_19595 PF00535 Glycosyl transferase family 2 EYD00_19600 PF11089 Exopolysaccharide production repressor EYD00_19615 PF01165 Ribosomal protein S21 EYD00_19625 PF01266 FAD dependent oxidoreductase EYD00_19635 PF04267 Sarcosine oxidase, delta subunit family EYD00_19640 PF08669 Glycine cleavage T-protein C-terminal barrel domain EYD00_19640 PF17806 Sarcosine oxidase A3 domain EYD00_19640 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_19640 PF01571 Aminomethyltransferase folate-binding domain EYD00_19655 PF01575 MaoC like domain EYD00_19660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD00_19660 PF18390 Glycogen debranching enzyme C-terminal domain EYD00_19660 PF00128 Alpha amylase, catalytic domain EYD00_19665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EYD00_19665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EYD00_19665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EYD00_19665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EYD00_19670 PF00534 Glycosyl transferases group 1 EYD00_19670 PF08323 Starch synthase catalytic domain EYD00_19675 PF00483 Nucleotidyl transferase EYD00_19680 PF02806 Alpha amylase, C-terminal all-beta domain EYD00_19680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD00_19680 PF00128 Alpha amylase, catalytic domain EYD00_19685 PF00343 Carbohydrate phosphorylase EYD00_19700 PF01177 Asp/Glu/Hydantoin racemase EYD00_19705 PF01037 Lrp/AsnC ligand binding domain EYD00_19715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_19715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD00_19725 PF00107 Zinc-binding dehydrogenase EYD00_19725 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_19735 PF00664 ABC transporter transmembrane region EYD00_19735 PF00005 ABC transporter EYD00_19740 PF00664 ABC transporter transmembrane region EYD00_19740 PF00005 ABC transporter EYD00_19745 PF01654 Cytochrome bd terminal oxidase subunit I EYD00_19750 PF02322 Cytochrome bd terminal oxidase subunit II EYD00_19755 PF08173 Membrane bound YbgT-like protein EYD00_19775 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EYD00_19775 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EYD00_19780 PF00890 FAD binding domain EYD00_19780 PF02910 Fumarate reductase flavoprotein C-term EYD00_19785 PF02445 Quinolinate synthetase A protein EYD00_19815 PF02224 Cytidylate kinase EYD00_19820 PF00575 S1 RNA binding domain EYD00_19850 PF00106 short chain dehydrogenase EYD00_19860 PF01321 Creatinase/Prolidase N-terminal domain EYD00_19860 PF00557 Metallopeptidase family M24 EYD00_19865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_19870 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19875 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_19875 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_19880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_19880 PF00005 ABC transporter EYD00_19885 PF00005 ABC transporter EYD00_19885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_19890 PF01232 Mannitol dehydrogenase Rossmann domain EYD00_19890 PF08125 Mannitol dehydrogenase C-terminal domain EYD00_19895 PF00392 Bacterial regulatory proteins, gntR family EYD00_19895 PF07729 FCD domain EYD00_19900 PF13378 Enolase C-terminal domain-like EYD00_19900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_19905 PF00296 Luciferase-like monooxygenase EYD00_19920 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD00_19920 PF00005 ABC transporter EYD00_19925 PF00005 ABC transporter EYD00_19930 PF02653 Branched-chain amino acid transport system / permease component EYD00_19935 PF02653 Branched-chain amino acid transport system / permease component EYD00_19935 PF11862 Domain of unknown function (DUF3382) EYD00_19940 PF05199 GMC oxidoreductase EYD00_19940 PF00732 GMC oxidoreductase EYD00_19945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD00_19945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_19950 PF00501 AMP-binding enzyme EYD00_19950 PF13193 AMP-binding enzyme C-terminal domain EYD00_19965 PF01011 PQQ enzyme repeat EYD00_19970 PF05974 Domain of unknown function (DUF892) EYD00_19975 PF02308 MgtC family EYD00_20000 PF01965 DJ-1/PfpI family EYD00_20025 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EYD00_20025 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EYD00_20030 PF16363 GDP-mannose 4,6 dehydratase EYD00_20035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EYD00_20035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EYD00_20035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EYD00_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_20045 PF03466 LysR substrate binding domain EYD00_20050 PF00171 Aldehyde dehydrogenase family EYD00_20055 PF09084 NMT1/THI5 like EYD00_20060 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20065 PF00005 ABC transporter EYD00_20070 PF14850 DNA-binding domain of Proline dehydrogenase EYD00_20070 PF01619 Proline dehydrogenase EYD00_20070 PF00171 Aldehyde dehydrogenase family EYD00_20070 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EYD00_20075 PF01037 Lrp/AsnC ligand binding domain EYD00_20080 PF08281 Sigma-70, region 4 EYD00_20080 PF04542 Sigma-70 region 2 EYD00_20090 PF00072 Response regulator receiver domain EYD00_20095 PF07536 HWE histidine kinase EYD00_20095 PF08447 PAS fold EYD00_20095 PF13426 PAS domain EYD00_20100 PF13426 PAS domain EYD00_20100 PF07536 HWE histidine kinase EYD00_20110 PF16363 GDP-mannose 4,6 dehydratase EYD00_20125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EYD00_20130 PF03435 Saccharopine dehydrogenase NADP binding domain EYD00_20130 PF16653 Saccharopine dehydrogenase C-terminal domain EYD00_20135 PF00270 DEAD/DEAH box helicase EYD00_20135 PF00271 Helicase conserved C-terminal domain EYD00_20145 PF00696 Amino acid kinase family EYD00_20145 PF13840 ACT domain EYD00_20145 PF01842 ACT domain EYD00_20150 PF02896 PEP-utilising enzyme, TIM barrel domain EYD00_20150 PF00391 PEP-utilising enzyme, mobile domain EYD00_20150 PF05524 PEP-utilising enzyme, N-terminal EYD00_20150 PF01590 GAF domain EYD00_20155 PF00472 RF-1 domain EYD00_20155 PF03462 PCRF domain EYD00_20160 PF05175 Methyltransferase small domain EYD00_20160 PF17827 PrmC N-terminal domain EYD00_20170 PF02861 Clp amino terminal domain, pathogenicity island component EYD00_20170 PF17871 AAA lid domain EYD00_20170 PF07724 AAA domain (Cdc48 subfamily) EYD00_20170 PF00004 ATPase family associated with various cellular activities (AAA) EYD00_20170 PF10431 C-terminal, D2-small domain, of ClpB protein EYD00_20175 PF01464 Transglycosylase SLT domain EYD00_20175 PF10145 Phage-related minor tail protein EYD00_20175 PF01551 Peptidase family M23 EYD00_20230 PF17912 MalK OB fold domain EYD00_20230 PF00005 ABC transporter EYD00_20235 PF00107 Zinc-binding dehydrogenase EYD00_20235 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_20240 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20245 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20255 PF12833 Helix-turn-helix domain EYD00_20275 PF00005 ABC transporter EYD00_20290 PF12833 Helix-turn-helix domain EYD00_20295 PF00106 short chain dehydrogenase EYD00_20305 PF00107 Zinc-binding dehydrogenase EYD00_20305 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_20330 PF00005 ABC transporter EYD00_20345 PF07969 Amidohydrolase family EYD00_20350 PF00128 Alpha amylase, catalytic domain EYD00_20350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD00_20375 PF00221 Aromatic amino acid lyase EYD00_20380 PF00392 Bacterial regulatory proteins, gntR family EYD00_20380 PF07702 UTRA domain EYD00_20395 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20400 PF00005 ABC transporter EYD00_20400 PF00571 CBS domain EYD00_20410 PF01266 FAD dependent oxidoreductase EYD00_20435 PF00563 EAL domain EYD00_20435 PF12792 CSS motif domain associated with EAL EYD00_20440 PF03466 LysR substrate binding domain EYD00_20440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_20445 PF00202 Aminotransferase class-III EYD00_20455 PF05035 2-keto-3-deoxy-galactonokinase EYD00_20460 PF00701 Dihydrodipicolinate synthetase family EYD00_20465 PF13378 Enolase C-terminal domain-like EYD00_20465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_20475 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20480 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20485 PF17912 MalK OB fold domain EYD00_20485 PF00005 ABC transporter EYD00_20490 PF16363 GDP-mannose 4,6 dehydratase EYD00_20495 PF01614 Bacterial transcriptional regulator EYD00_20495 PF09339 IclR helix-turn-helix domain EYD00_20510 PF00440 Bacterial regulatory proteins, tetR family EYD00_20515 PF13188 PAS domain EYD00_20515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_20515 PF00072 Response regulator receiver domain EYD00_20515 PF08448 PAS fold EYD00_20515 PF00512 His Kinase A (phospho-acceptor) domain EYD00_20520 PF00486 Transcriptional regulatory protein, C terminal EYD00_20520 PF00072 Response regulator receiver domain EYD00_20535 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20540 PF00005 ABC transporter EYD00_20540 PF08402 TOBE domain EYD00_20545 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_20545 PF00107 Zinc-binding dehydrogenase EYD00_20550 PF12833 Helix-turn-helix domain EYD00_20555 PF13407 Periplasmic binding protein domain EYD00_20560 PF00005 ABC transporter EYD00_20565 PF02653 Branched-chain amino acid transport system / permease component EYD00_20570 PF00106 short chain dehydrogenase EYD00_20575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EYD00_20575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EYD00_20585 PF08946 Osmosensory transporter coiled coil EYD00_20585 PF00083 Sugar (and other) transporter EYD00_20595 PF00459 Inositol monophosphatase family EYD00_20610 PF02690 Na+/Pi-cotransporter EYD00_20615 PF00356 Bacterial regulatory proteins, lacI family EYD00_20620 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20625 PF08402 TOBE domain EYD00_20625 PF00005 ABC transporter EYD00_20645 PF00459 Inositol monophosphatase family EYD00_20655 PF00171 Aldehyde dehydrogenase family EYD00_20660 PF00180 Isocitrate/isopropylmalate dehydrogenase EYD00_20665 PF00171 Aldehyde dehydrogenase family EYD00_20675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_20680 PF01546 Peptidase family M20/M25/M40 EYD00_20680 PF07687 Peptidase dimerisation domain EYD00_20695 PF01032 FecCD transport family EYD00_20700 PF00005 ABC transporter EYD00_20705 PF00127 Copper binding proteins, plastocyanin/azurin family EYD00_20710 PF01209 ubiE/COQ5 methyltransferase family EYD00_20725 PF01032 FecCD transport family EYD00_20730 PF00005 ABC transporter EYD00_20740 PF00664 ABC transporter transmembrane region EYD00_20740 PF00005 ABC transporter EYD00_20745 PF00529 HlyD membrane-fusion protein of T1SS EYD00_20745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_20755 PF07729 FCD domain EYD00_20755 PF00392 Bacterial regulatory proteins, gntR family EYD00_20760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_20760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_20765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_20765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_20770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_20770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_20780 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20785 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20790 PF08402 TOBE domain EYD00_20790 PF00005 ABC transporter EYD00_20795 PF00920 Dehydratase family EYD00_20800 PF01370 NAD dependent epimerase/dehydratase family EYD00_20805 PF03737 Aldolase/RraA EYD00_20810 PF00072 Response regulator receiver domain EYD00_20810 PF00196 Bacterial regulatory proteins, luxR family EYD00_20815 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20825 PF00005 ABC transporter EYD00_20825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_20840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_20855 PF01112 Asparaginase EYD00_20860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_20860 PF03466 LysR substrate binding domain EYD00_20865 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_20875 PF00005 ABC transporter EYD00_20885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_20890 PF01546 Peptidase family M20/M25/M40 EYD00_20900 PF13407 Periplasmic binding protein domain EYD00_20905 PF00005 ABC transporter EYD00_20910 PF02653 Branched-chain amino acid transport system / permease component EYD00_20915 PF07722 Peptidase C26 EYD00_20920 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_20925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_20930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EYD00_20950 PF01266 FAD dependent oxidoreductase EYD00_20955 PF08447 PAS fold EYD00_20955 PF13426 PAS domain EYD00_20955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_20965 PF03972 MmgE/PrpD family EYD00_20970 PF00005 ABC transporter EYD00_20975 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20980 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_20985 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_20990 PF01515 Phosphate acetyl/butaryl transferase EYD00_20990 PF03949 Malic enzyme, NAD binding domain EYD00_20990 PF00390 Malic enzyme, N-terminal domain EYD00_20995 PF03466 LysR substrate binding domain EYD00_20995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_21000 PF01011 PQQ enzyme repeat EYD00_21010 PF00483 Nucleotidyl transferase EYD00_21010 PF01050 Mannose-6-phosphate isomerase EYD00_21020 PF01547 Bacterial extracellular solute-binding protein EYD00_21030 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21035 PF00005 ABC transporter EYD00_21035 PF17912 MalK OB fold domain EYD00_21050 PF06508 Queuosine biosynthesis protein QueC EYD00_21055 PF01242 6-pyruvoyl tetrahydropterin synthase EYD00_21060 PF04055 Radical SAM superfamily EYD00_21065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_21065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_21075 PF03459 TOBE domain EYD00_21075 PF00005 ABC transporter EYD00_21075 PF17912 MalK OB fold domain EYD00_21080 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21085 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21090 PF01547 Bacterial extracellular solute-binding protein EYD00_21095 PF00356 Bacterial regulatory proteins, lacI family EYD00_21110 PF02245 Methylpurine-DNA glycosylase (MPG) EYD00_21130 PF03734 L,D-transpeptidase catalytic domain EYD00_21130 PF17969 L,D-transpeptidase C-terminal domain EYD00_21150 PF00005 ABC transporter EYD00_21155 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_21160 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21165 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21170 PF02574 Homocysteine S-methyltransferase EYD00_21170 PF00809 Pterin binding enzyme EYD00_21170 PF02965 Vitamin B12 dependent methionine synthase, activation domain EYD00_21170 PF02607 B12 binding domain EYD00_21170 PF02310 B12 binding domain EYD00_21175 PF00202 Aminotransferase class-III EYD00_21185 PF02397 Bacterial sugar transferase EYD00_21190 PF02563 Polysaccharide biosynthesis/export protein EYD00_21205 PF00529 HlyD membrane-fusion protein of T1SS EYD00_21210 PF00664 ABC transporter transmembrane region EYD00_21210 PF00005 ABC transporter EYD00_21225 PF00196 Bacterial regulatory proteins, luxR family EYD00_21225 PF00072 Response regulator receiver domain EYD00_21235 PF16363 GDP-mannose 4,6 dehydratase EYD00_21240 PF16363 GDP-mannose 4,6 dehydratase EYD00_21270 PF07238 PilZ domain EYD00_21270 PF00535 Glycosyl transferase family 2 EYD00_21270 PF03552 Cellulose synthase EYD00_21280 PF01270 Glycosyl hydrolases family 8 EYD00_21305 PF00202 Aminotransferase class-III EYD00_21310 PF00892 EamA-like transporter family EYD00_21315 PF00375 Sodium:dicarboxylate symporter family EYD00_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_21320 PF00512 His Kinase A (phospho-acceptor) domain EYD00_21320 PF02743 Cache domain EYD00_21325 PF00072 Response regulator receiver domain EYD00_21325 PF00158 Sigma-54 interaction domain EYD00_21325 PF02954 Bacterial regulatory protein, Fis family EYD00_21340 PF01266 FAD dependent oxidoreductase EYD00_21345 PF00842 Alanine racemase, C-terminal domain EYD00_21345 PF01168 Alanine racemase, N-terminal domain EYD00_21350 PF01037 Lrp/AsnC ligand binding domain EYD00_21355 PF08543 Phosphomethylpyrimidine kinase EYD00_21360 PF02581 Thiamine monophosphate synthase EYD00_21365 PF02110 Hydroxyethylthiazole kinase family EYD00_21370 PF09084 NMT1/THI5 like EYD00_21375 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21380 PF01055 Glycosyl hydrolases family 31 EYD00_21385 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21390 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21395 PF01547 Bacterial extracellular solute-binding protein EYD00_21400 PF00005 ABC transporter EYD00_21400 PF08402 TOBE domain EYD00_21410 PF00296 Luciferase-like monooxygenase EYD00_21415 PF00248 Aldo/keto reductase family EYD00_21420 PF01613 Flavin reductase like domain EYD00_21435 PF00873 AcrB/AcrD/AcrF family EYD00_21440 PF13533 Biotin-lipoyl like EYD00_21445 PF02563 Polysaccharide biosynthesis/export protein EYD00_21450 PF00534 Glycosyl transferases group 1 EYD00_21450 PF13439 Glycosyltransferase Family 4 EYD00_21455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_21460 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21465 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_21465 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21470 PF01979 Amidohydrolase family EYD00_21485 PF03841 L-seryl-tRNA selenium transferase EYD00_21490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_21490 PF00005 ABC transporter EYD00_21495 PF02798 Glutathione S-transferase, N-terminal domain EYD00_21495 PF00043 Glutathione S-transferase, C-terminal domain EYD00_21510 PF00296 Luciferase-like monooxygenase EYD00_21515 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_21520 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_21525 PF00171 Aldehyde dehydrogenase family EYD00_21535 PF03786 D-mannonate dehydratase (UxuA) EYD00_21540 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_21540 PF00107 Zinc-binding dehydrogenase EYD00_21545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_21555 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_21560 PF07729 FCD domain EYD00_21560 PF00392 Bacterial regulatory proteins, gntR family EYD00_21565 PF13419 Haloacid dehalogenase-like hydrolase EYD00_21570 PF05209 Septum formation inhibitor MinC, N-terminal domain EYD00_21570 PF03775 Septum formation inhibitor MinC, C-terminal domain EYD00_21575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EYD00_21580 PF03776 Septum formation topological specificity factor MinE EYD00_21590 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_21595 PF00563 EAL domain EYD00_21595 PF00990 Diguanylate cyclase, GGDEF domain EYD00_21595 PF08447 PAS fold EYD00_21595 PF08448 PAS fold EYD00_21600 PF01425 Amidase EYD00_21630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_21640 PF01547 Bacterial extracellular solute-binding protein EYD00_21645 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21650 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21655 PF03459 TOBE domain EYD00_21655 PF17912 MalK OB fold domain EYD00_21655 PF00005 ABC transporter EYD00_21665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EYD00_21665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EYD00_21675 PF05161 MOFRL family EYD00_21675 PF13660 Domain of unknown function (DUF4147) EYD00_21690 PF07690 Major Facilitator Superfamily EYD00_21695 PF07729 FCD domain EYD00_21695 PF00392 Bacterial regulatory proteins, gntR family EYD00_21700 PF02653 Branched-chain amino acid transport system / permease component EYD00_21705 PF02653 Branched-chain amino acid transport system / permease component EYD00_21710 PF00005 ABC transporter EYD00_21715 PF13407 Periplasmic binding protein domain EYD00_21720 PF00920 Dehydratase family EYD00_21730 PF00266 Aminotransferase class-V EYD00_21735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_21735 PF00005 ABC transporter EYD00_21740 PF00005 ABC transporter EYD00_21740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_21745 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21750 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_21760 PF01580 FtsK/SpoIIIE family EYD00_21760 PF09397 Ftsk gamma domain EYD00_21760 PF17854 FtsK alpha domain EYD00_21760 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EYD00_21765 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21770 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21775 PF00005 ABC transporter EYD00_21775 PF17912 MalK OB fold domain EYD00_21785 PF07470 Glycosyl Hydrolase Family 88 EYD00_21805 PF07690 Major Facilitator Superfamily EYD00_21810 PF00593 TonB dependent receptor EYD00_21810 PF07715 TonB-dependent Receptor Plug Domain EYD00_21815 PF04773 FecR protein EYD00_21815 PF16220 Domain of unknown function (DUF4880) EYD00_21825 PF01325 Iron dependent repressor, N-terminal DNA binding domain EYD00_21825 PF00480 ROK family EYD00_21830 PF03009 Glycerophosphoryl diester phosphodiesterase family EYD00_21835 PF00106 short chain dehydrogenase EYD00_21840 PF12833 Helix-turn-helix domain EYD00_21840 PF12852 Cupin EYD00_21845 PF00480 ROK family EYD00_21850 PF01547 Bacterial extracellular solute-binding protein EYD00_21855 PF00005 ABC transporter EYD00_21855 PF08402 TOBE domain EYD00_21860 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_21875 PF11953 Domain of unknown function (DUF3470) EYD00_21875 PF00037 4Fe-4S binding domain EYD00_21880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EYD00_21880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EYD00_21910 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_21910 PF08659 KR domain EYD00_21910 PF16197 Ketoacyl-synthetase C-terminal extension EYD00_21910 PF00550 Phosphopantetheine attachment site EYD00_21910 PF09277 Erythronolide synthase, docking EYD00_21910 PF08990 Erythronolide synthase docking EYD00_21910 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_21910 PF00698 Acyl transferase domain EYD00_21910 PF14765 Polyketide synthase dehydratase EYD00_21910 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_21915 PF00155 Aminotransferase class I and II EYD00_21920 PF00106 short chain dehydrogenase EYD00_21925 PF00884 Sulfatase EYD00_21930 PF05159 Capsule polysaccharide biosynthesis protein EYD00_21935 PF02563 Polysaccharide biosynthesis/export protein EYD00_21940 PF01061 ABC-2 type transporter EYD00_21945 PF00005 ABC transporter EYD00_21955 PF05159 Capsule polysaccharide biosynthesis protein EYD00_21970 PF00534 Glycosyl transferases group 1 EYD00_21970 PF13477 Glycosyl transferase 4-like EYD00_21990 PF07508 Recombinase EYD00_21990 PF00239 Resolvase, N terminal domain EYD00_21990 PF13408 Recombinase zinc beta ribbon domain EYD00_22000 PF05717 IS66 Orf2 like protein EYD00_22005 PF13817 IS66 C-terminal element EYD00_22005 PF13007 Transposase C of IS166 homeodomain EYD00_22005 PF13005 zinc-finger binding domain of transposase IS66 EYD00_22005 PF03050 Transposase IS66 family EYD00_22010 PF07929 Plasmid pRiA4b ORF-3-like protein EYD00_22020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EYD00_22020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EYD00_22020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EYD00_22055 PF01758 Sodium Bile acid symporter family EYD00_22060 PF00248 Aldo/keto reductase family EYD00_22065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_22065 PF03466 LysR substrate binding domain EYD00_22075 PF00664 ABC transporter transmembrane region EYD00_22075 PF00005 ABC transporter EYD00_22085 PF00534 Glycosyl transferases group 1 EYD00_22090 PF00294 pfkB family carbohydrate kinase EYD00_22090 PF01467 Cytidylyltransferase-like EYD00_22095 PF01370 NAD dependent epimerase/dehydratase family EYD00_22115 PF01527 Transposase EYD00_22120 PF05717 IS66 Orf2 like protein EYD00_22125 PF13817 IS66 C-terminal element EYD00_22125 PF03050 Transposase IS66 family EYD00_22125 PF13007 Transposase C of IS166 homeodomain EYD00_22125 PF13005 zinc-finger binding domain of transposase IS66 EYD00_22130 PF02371 Transposase IS116/IS110/IS902 family EYD00_22130 PF01548 Transposase EYD00_22165 PF05717 IS66 Orf2 like protein EYD00_22170 PF01527 Transposase EYD00_22190 PF01695 IstB-like ATP binding protein EYD00_22195 PF00665 Integrase core domain EYD00_22200 PF00665 Integrase core domain EYD00_22200 PF13276 HTH-like domain EYD00_22200 PF13333 Integrase core domain EYD00_22235 PF13361 UvrD-like helicase C-terminal domain EYD00_22235 PF00580 UvrD/REP helicase N-terminal domain EYD00_22245 PF00356 Bacterial regulatory proteins, lacI family EYD00_22250 PF01593 Flavin containing amine oxidoreductase EYD00_22260 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22265 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22270 PF00005 ABC transporter EYD00_22270 PF17912 MalK OB fold domain EYD00_22270 PF03459 TOBE domain EYD00_22275 PF00005 ABC transporter EYD00_22275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22280 PF00005 ABC transporter EYD00_22280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22285 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22285 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_22290 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22295 PF00392 Bacterial regulatory proteins, gntR family EYD00_22295 PF07729 FCD domain EYD00_22300 PF03786 D-mannonate dehydratase (UxuA) EYD00_22305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_22315 PF00563 EAL domain EYD00_22315 PF13188 PAS domain EYD00_22315 PF03707 Bacterial signalling protein N terminal repeat EYD00_22315 PF00990 Diguanylate cyclase, GGDEF domain EYD00_22330 PF02735 Ku70/Ku80 beta-barrel domain EYD00_22335 PF13298 DNA polymerase Ligase (LigD) EYD00_22335 PF04679 ATP dependent DNA ligase C terminal region EYD00_22335 PF01068 ATP dependent DNA ligase domain EYD00_22340 PF02735 Ku70/Ku80 beta-barrel domain EYD00_22345 PF01384 Phosphate transporter family EYD00_22350 PF01865 Protein of unknown function DUF47 EYD00_22360 PF03466 LysR substrate binding domain EYD00_22360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_22365 PF00141 Peroxidase EYD00_22375 PF12833 Helix-turn-helix domain EYD00_22375 PF02311 AraC-like ligand binding domain EYD00_22380 PF00593 TonB dependent receptor EYD00_22380 PF07715 TonB-dependent Receptor Plug Domain EYD00_22390 PF01032 FecCD transport family EYD00_22395 PF01032 FecCD transport family EYD00_22400 PF00005 ABC transporter EYD00_22410 PF01381 Helix-turn-helix EYD00_22415 PF12833 Helix-turn-helix domain EYD00_22415 PF10114 Sensory domain found in PocR EYD00_22425 PF02653 Branched-chain amino acid transport system / permease component EYD00_22435 PF00005 ABC transporter EYD00_22435 PF12399 Branched-chain amino acid ATP-binding cassette transporter EYD00_22440 PF00005 ABC transporter EYD00_22445 PF00171 Aldehyde dehydrogenase family EYD00_22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_22450 PF03466 LysR substrate binding domain EYD00_22455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EYD00_22460 PF12411 Choline sulfatase enzyme C terminal EYD00_22460 PF00884 Sulfatase EYD00_22465 PF00294 pfkB family carbohydrate kinase EYD00_22470 PF03459 TOBE domain EYD00_22470 PF17912 MalK OB fold domain EYD00_22470 PF00005 ABC transporter EYD00_22475 PF14698 Argininosuccinate lyase C-terminal EYD00_22475 PF00206 Lyase EYD00_22480 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22485 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22490 PF13416 Bacterial extracellular solute-binding protein EYD00_22495 PF00480 ROK family EYD00_22520 PF11975 Family 4 glycosyl hydrolase C-terminal domain EYD00_22520 PF02056 Family 4 glycosyl hydrolase EYD00_22525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_22530 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22535 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_22535 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22540 PF00005 ABC transporter EYD00_22545 PF11975 Family 4 glycosyl hydrolase C-terminal domain EYD00_22545 PF02056 Family 4 glycosyl hydrolase EYD00_22555 PF13533 Biotin-lipoyl like EYD00_22560 PF00005 ABC transporter EYD00_22580 PF00072 Response regulator receiver domain EYD00_22585 PF12327 FtsZ family, C-terminal domain EYD00_22585 PF00091 Tubulin/FtsZ family, GTPase domain EYD00_22590 PF00392 Bacterial regulatory proteins, gntR family EYD00_22590 PF07729 FCD domain EYD00_22595 PF00701 Dihydrodipicolinate synthetase family EYD00_22600 PF02615 Malate/L-lactate dehydrogenase EYD00_22615 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22620 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22625 PF00005 ABC transporter EYD00_22630 PF01266 FAD dependent oxidoreductase EYD00_22640 PF05544 Proline racemase EYD00_22645 PF00356 Bacterial regulatory proteins, lacI family EYD00_22655 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_22665 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22670 PF00005 ABC transporter EYD00_22675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_22675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_22680 PF03707 Bacterial signalling protein N terminal repeat EYD00_22680 PF00990 Diguanylate cyclase, GGDEF domain EYD00_22680 PF00563 EAL domain EYD00_22685 PF02530 Porin subfamily EYD00_22690 PF01979 Amidohydrolase family EYD00_22695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_22705 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_22705 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22710 PF01979 Amidohydrolase family EYD00_22715 PF01979 Amidohydrolase family EYD00_22720 PF00005 ABC transporter EYD00_22720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22725 PF00005 ABC transporter EYD00_22725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22730 PF07729 FCD domain EYD00_22730 PF00392 Bacterial regulatory proteins, gntR family EYD00_22735 PF01613 Flavin reductase like domain EYD00_22740 PF01177 Asp/Glu/Hydantoin racemase EYD00_22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_22745 PF03466 LysR substrate binding domain EYD00_22755 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EYD00_22755 PF00037 4Fe-4S binding domain EYD00_22755 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EYD00_22760 PF00037 4Fe-4S binding domain EYD00_22760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD00_22760 PF01568 Molydopterin dinucleotide binding domain EYD00_22760 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EYD00_22760 PF00384 Molybdopterin oxidoreductase EYD00_22770 PF07690 Major Facilitator Superfamily EYD00_22775 PF00701 Dihydrodipicolinate synthetase family EYD00_22780 PF08450 SMP-30/Gluconolactonase/LRE-like region EYD00_22790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_22795 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22800 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_22800 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22805 PF00005 ABC transporter EYD00_22810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EYD00_22810 PF13378 Enolase C-terminal domain-like EYD00_22820 PF07729 FCD domain EYD00_22820 PF00392 Bacterial regulatory proteins, gntR family EYD00_22825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_22830 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_22845 PF00005 ABC transporter EYD00_22850 PF00459 Inositol monophosphatase family EYD00_22860 PF00005 ABC transporter EYD00_22860 PF17850 CysA C-terminal regulatory domain EYD00_22865 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_22880 PF05532 CsbD-like EYD00_22890 PF03358 NADPH-dependent FMN reductase EYD00_22905 PF00199 Catalase EYD00_22905 PF06628 Catalase-related immune-responsive EYD00_22905 PF18011 C-terminal domain found in long catalases EYD00_22925 PF00106 short chain dehydrogenase EYD00_22930 PF13823 Alcohol dehydrogenase GroES-associated EYD00_22930 PF00107 Zinc-binding dehydrogenase EYD00_22930 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_22935 PF00384 Molybdopterin oxidoreductase EYD00_22950 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD00_22975 PF00034 Cytochrome c EYD00_22995 PF08241 Methyltransferase domain EYD00_23000 PF04542 Sigma-70 region 2 EYD00_23000 PF08281 Sigma-70, region 4 EYD00_23005 PF00128 Alpha amylase, catalytic domain EYD00_23005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EYD00_23005 PF11941 Domain of unknown function (DUF3459) EYD00_23015 PF08323 Starch synthase catalytic domain EYD00_23015 PF00534 Glycosyl transferases group 1 EYD00_23040 PF05974 Domain of unknown function (DUF892) EYD00_23095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EYD00_23095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EYD00_23100 PF03401 Tripartite tricarboxylate transporter family receptor EYD00_23105 PF00664 ABC transporter transmembrane region EYD00_23105 PF00005 ABC transporter EYD00_23125 PF04199 Putative cyclase EYD00_23135 PF00190 Cupin EYD00_23145 PF00196 Bacterial regulatory proteins, luxR family EYD00_23145 PF00072 Response regulator receiver domain EYD00_23150 PF00196 Bacterial regulatory proteins, luxR family EYD00_23150 PF00072 Response regulator receiver domain EYD00_23155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_23155 PF00072 Response regulator receiver domain EYD00_23155 PF00512 His Kinase A (phospho-acceptor) domain EYD00_23155 PF13426 PAS domain EYD00_23155 PF08448 PAS fold EYD00_23160 PF00384 Molybdopterin oxidoreductase EYD00_23165 PF00210 Ferritin-like domain EYD00_23170 PF00561 alpha/beta hydrolase fold EYD00_23185 PF06441 Epoxide hydrolase N terminus EYD00_23190 PF00171 Aldehyde dehydrogenase family EYD00_23195 PF02566 OsmC-like protein EYD00_23200 PF00672 HAMP domain EYD00_23200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_23200 PF00512 His Kinase A (phospho-acceptor) domain EYD00_23205 PF00486 Transcriptional regulatory protein, C terminal EYD00_23205 PF00072 Response regulator receiver domain EYD00_23210 PF00561 alpha/beta hydrolase fold EYD00_23220 PF02683 Cytochrome C biogenesis protein transmembrane region EYD00_23220 PF17991 Thioredoxin like C-terminal domain EYD00_23220 PF00578 AhpC/TSA family EYD00_23230 PF07690 Major Facilitator Superfamily EYD00_23235 PF00005 ABC transporter EYD00_23235 PF06472 ABC transporter transmembrane region 2 EYD00_23245 PF00999 Sodium/hydrogen exchanger family EYD00_23250 PF16884 N-terminal domain of oxidoreductase EYD00_23250 PF00107 Zinc-binding dehydrogenase EYD00_23255 PF01842 ACT domain EYD00_23255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EYD00_23255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EYD00_23265 PF13505 Outer membrane protein beta-barrel domain EYD00_23275 PF00300 Histidine phosphatase superfamily (branch 1) EYD00_23290 PF02195 ParB-like nuclease domain EYD00_23290 PF07506 RepB plasmid partitioning protein EYD00_23295 PF11800 Replication protein C C-terminal region EYD00_23295 PF03428 Replication protein C N-terminal domain EYD00_23320 PF03358 NADPH-dependent FMN reductase EYD00_23325 PF03960 ArsC family EYD00_23330 PF01758 Sodium Bile acid symporter family EYD00_23400 PF07756 Protein of unknown function (DUF1612) EYD00_23400 PF11972 HTH DNA binding domain EYD00_23405 PF07693 KAP family P-loop domain EYD00_23440 PF01488 Shikimate / quinate 5-dehydrogenase EYD00_23440 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EYD00_23440 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EYD00_23470 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_23475 PF00005 ABC transporter EYD00_23480 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_23490 PF00480 ROK family EYD00_23495 PF00480 ROK family EYD00_23505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_23515 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_23525 PF01380 SIS domain EYD00_23535 PF01261 Xylose isomerase-like TIM barrel EYD00_23540 PF00710 Asparaginase, N-terminal EYD00_23540 PF17763 Glutaminase/Asparaginase C-terminal domain EYD00_23545 PF00392 Bacterial regulatory proteins, gntR family EYD00_23545 PF07729 FCD domain EYD00_23550 PF00005 ABC transporter EYD00_23555 PF00497 Bacterial extracellular solute-binding proteins, family 3 EYD00_23560 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_23565 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_23575 PF14698 Argininosuccinate lyase C-terminal EYD00_23575 PF00206 Lyase EYD00_23585 PF00294 pfkB family carbohydrate kinase EYD00_23590 PF03466 LysR substrate binding domain EYD00_23590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_23595 PF00106 short chain dehydrogenase EYD00_23600 PF02627 Carboxymuconolactone decarboxylase family EYD00_23615 PF02082 Transcriptional regulator EYD00_23625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD00_23625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD00_23625 PF02805 Metal binding domain of Ada EYD00_23625 PF12833 Helix-turn-helix domain EYD00_23660 PF05284 Protein of unknown function (DUF736) EYD00_23665 PF00216 Bacterial DNA-binding protein EYD00_23670 PF05406 WGR domain EYD00_23680 PF02534 Type IV secretory system Conjugative DNA transfer EYD00_23685 PF06412 Conjugal transfer protein TraD EYD00_23690 PF07820 TraC-like protein EYD00_23695 PF03389 MobA/MobL family EYD00_23695 PF01443 Viral (Superfamily 1) RNA helicase EYD00_23695 PF17841 BID domain of Bartonella effector protein (Bep) EYD00_23700 PF10502 Signal peptidase, peptidase S26 EYD00_23705 PF00795 Carbon-nitrogen hydrolase EYD00_23710 PF06871 TraH_2 EYD00_23715 PF09228 Prokaryotic Transcriptional repressor TraM EYD00_23720 PF00196 Bacterial regulatory proteins, luxR family EYD00_23720 PF03472 Autoinducer binding domain EYD00_23725 PF01042 Endoribonuclease L-PSP EYD00_23740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_23740 PF03466 LysR substrate binding domain EYD00_23755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_23755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD00_23760 PF00561 alpha/beta hydrolase fold EYD00_23765 PF00561 alpha/beta hydrolase fold EYD00_23780 PF05717 IS66 Orf2 like protein EYD00_23785 PF13007 Transposase C of IS166 homeodomain EYD00_23785 PF13817 IS66 C-terminal element EYD00_23785 PF03050 Transposase IS66 family EYD00_23785 PF13005 zinc-finger binding domain of transposase IS66 EYD00_23790 PF00171 Aldehyde dehydrogenase family EYD00_23795 PF00732 GMC oxidoreductase EYD00_23795 PF05199 GMC oxidoreductase EYD00_23800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_23805 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_23810 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_23810 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_23815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_23815 PF00005 ABC transporter EYD00_23820 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EYD00_23820 PF12833 Helix-turn-helix domain EYD00_23825 PF01546 Peptidase family M20/M25/M40 EYD00_23825 PF07687 Peptidase dimerisation domain EYD00_23830 PF00171 Aldehyde dehydrogenase family EYD00_23840 PF06719 AraC-type transcriptional regulator N-terminus EYD00_23840 PF12833 Helix-turn-helix domain EYD00_23850 PF05368 NmrA-like family EYD00_23855 PF10518 TAT (twin-arginine translocation) pathway signal sequence EYD00_23855 PF01799 [2Fe-2S] binding domain EYD00_23855 PF00111 2Fe-2S iron-sulfur cluster binding domain EYD00_23860 PF03450 CO dehydrogenase flavoprotein C-terminal domain EYD00_23860 PF00941 FAD binding domain in molybdopterin dehydrogenase EYD00_23865 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EYD00_23865 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EYD00_23875 PF00698 Acyl transferase domain EYD00_23875 PF00109 Beta-ketoacyl synthase, N-terminal domain EYD00_23875 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_23875 PF08990 Erythronolide synthase docking EYD00_23875 PF14765 Polyketide synthase dehydratase EYD00_23875 PF00550 Phosphopantetheine attachment site EYD00_23875 PF08659 KR domain EYD00_23875 PF09277 Erythronolide synthase, docking EYD00_23875 PF02801 Beta-ketoacyl synthase, C-terminal domain EYD00_23875 PF16197 Ketoacyl-synthetase C-terminal extension EYD00_23885 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_23885 PF00107 Zinc-binding dehydrogenase EYD00_23890 PF00155 Aminotransferase class I and II EYD00_23895 PF01266 FAD dependent oxidoreductase EYD00_23905 PF01965 DJ-1/PfpI family EYD00_23925 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family EYD00_23930 PF00210 Ferritin-like domain EYD00_23940 PF00561 alpha/beta hydrolase fold EYD00_23945 PF01965 DJ-1/PfpI family EYD00_23955 PF01638 HxlR-like helix-turn-helix EYD00_23970 PF01526 Tn3 transposase DDE domain EYD00_23970 PF13700 Domain of unknown function (DUF4158) EYD00_23990 PF00586 AIR synthase related protein, N-terminal domain EYD00_23990 PF02769 AIR synthase related protein, C-terminal domain EYD00_24005 PF00795 Carbon-nitrogen hydrolase EYD00_24015 PF00392 Bacterial regulatory proteins, gntR family EYD00_24015 PF00155 Aminotransferase class I and II EYD00_24045 PF13533 Biotin-lipoyl like EYD00_24050 PF02678 Pirin EYD00_24050 PF17954 Quercetinase C-terminal cupin domain EYD00_24055 PF00857 Isochorismatase family EYD00_24060 PF03466 LysR substrate binding domain EYD00_24060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_24065 PF01638 HxlR-like helix-turn-helix EYD00_24070 PF08240 Alcohol dehydrogenase GroES-like domain EYD00_24070 PF00107 Zinc-binding dehydrogenase EYD00_24075 PF00171 Aldehyde dehydrogenase family EYD00_24080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_24080 PF03466 LysR substrate binding domain EYD00_24085 PF00561 alpha/beta hydrolase fold EYD00_24090 PF16123 Hydroxyacylglutathione hydrolase C-terminus EYD00_24090 PF00753 Metallo-beta-lactamase superfamily EYD00_24095 PF14525 AraC-binding-like domain EYD00_24095 PF12833 Helix-turn-helix domain EYD00_24100 PF12833 Helix-turn-helix domain EYD00_24100 PF02311 AraC-like ligand binding domain EYD00_24105 PF00561 alpha/beta hydrolase fold EYD00_24110 PF03595 Voltage-dependent anion channel EYD00_24130 PF02798 Glutathione S-transferase, N-terminal domain EYD00_24135 PF00175 Oxidoreductase NAD-binding domain EYD00_24135 PF00042 Globin EYD00_24135 PF00970 Oxidoreductase FAD-binding domain EYD00_24145 PF03466 LysR substrate binding domain EYD00_24145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_24160 PF00857 Isochorismatase family EYD00_24200 PF00561 alpha/beta hydrolase fold EYD00_24205 PF00005 ABC transporter EYD00_24205 PF17912 MalK OB fold domain EYD00_24205 PF03459 TOBE domain EYD00_24220 PF13416 Bacterial extracellular solute-binding protein EYD00_24230 PF01381 Helix-turn-helix EYD00_24235 PF07804 HipA-like C-terminal domain EYD00_24235 PF13657 HipA N-terminal domain EYD00_24240 PF04221 RelB antitoxin EYD00_24250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_24250 PF00672 HAMP domain EYD00_24260 PF09386 Antitoxin ParD EYD00_24265 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EYD00_24270 PF01850 PIN domain EYD00_24275 PF09957 Bacterial antitoxin of type II TA system, VapB EYD00_24290 PF00356 Bacterial regulatory proteins, lacI family EYD00_24295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_24305 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_24310 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_24310 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_24315 PF00005 ABC transporter EYD00_24315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_24320 PF01261 Xylose isomerase-like TIM barrel EYD00_24325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EYD00_24325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EYD00_24335 PF07704 Rv0623-like transcription factor EYD00_24340 PF01850 PIN domain EYD00_24355 PF00128 Alpha amylase, catalytic domain EYD00_24365 PF00440 Bacterial regulatory proteins, tetR family EYD00_24370 PF00561 alpha/beta hydrolase fold EYD00_24375 PF12697 Alpha/beta hydrolase family EYD00_24395 PF00440 Bacterial regulatory proteins, tetR family EYD00_24395 PF08361 MAATS-type transcriptional repressor, C-terminal region EYD00_24405 PF00924 Mechanosensitive ion channel EYD00_24410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_24410 PF00512 His Kinase A (phospho-acceptor) domain EYD00_24410 PF08448 PAS fold EYD00_24410 PF13188 PAS domain EYD00_24410 PF00072 Response regulator receiver domain EYD00_24415 PF02082 Transcriptional regulator EYD00_24420 PF00196 Bacterial regulatory proteins, luxR family EYD00_24420 PF00072 Response regulator receiver domain EYD00_24445 PF00924 Mechanosensitive ion channel EYD00_24450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_24450 PF13426 PAS domain EYD00_24450 PF08447 PAS fold EYD00_24450 PF13493 Domain of unknown function (DUF4118) EYD00_24450 PF00989 PAS fold EYD00_24450 PF00512 His Kinase A (phospho-acceptor) domain EYD00_24455 PF00072 Response regulator receiver domain EYD00_24455 PF00158 Sigma-54 interaction domain EYD00_24460 PF16123 Hydroxyacylglutathione hydrolase C-terminus EYD00_24460 PF00753 Metallo-beta-lactamase superfamily EYD00_24475 PF00561 alpha/beta hydrolase fold EYD00_24480 PF16123 Hydroxyacylglutathione hydrolase C-terminus EYD00_24480 PF00753 Metallo-beta-lactamase superfamily EYD00_24485 PF02798 Glutathione S-transferase, N-terminal domain EYD00_24485 PF00043 Glutathione S-transferase, C-terminal domain EYD00_24500 PF07992 Pyridine nucleotide-disulphide oxidoreductase EYD00_24505 PF00561 alpha/beta hydrolase fold EYD00_24515 PF04752 ChaC-like protein EYD00_24550 PF13545 Crp-like helix-turn-helix domain EYD00_24550 PF00027 Cyclic nucleotide-binding domain EYD00_24555 PF00072 Response regulator receiver domain EYD00_24555 PF00196 Bacterial regulatory proteins, luxR family EYD00_24560 PF00512 His Kinase A (phospho-acceptor) domain EYD00_24560 PF00989 PAS fold EYD00_24560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_24565 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EYD00_24580 PF00394 Multicopper oxidase EYD00_24580 PF07732 Multicopper oxidase EYD00_24600 PF00092 von Willebrand factor type A domain EYD00_24605 PF07728 AAA domain (dynein-related subfamily) EYD00_24605 PF08406 CbbQ/NirQ/NorQ C-terminal EYD00_24610 PF00115 Cytochrome C and Quinol oxidase polypeptide I EYD00_24615 PF00034 Cytochrome c EYD00_24625 PF00510 Cytochrome c oxidase subunit III EYD00_24640 PF02441 Flavoprotein EYD00_24645 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EYD00_24650 PF04343 Protein of unknown function, DUF488 EYD00_24685 PF00005 ABC transporter EYD00_24695 PF06796 Periplasmic nitrate reductase protein NapE EYD00_24710 PF00384 Molybdopterin oxidoreductase EYD00_24710 PF01568 Molydopterin dinucleotide binding domain EYD00_24710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EYD00_24715 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EYD00_24720 PF03264 NapC/NirT cytochrome c family, N-terminal region EYD00_24745 PF05661 Protein of unknown function (DUF808) EYD00_24750 PF01544 CorA-like Mg2+ transporter protein EYD00_24765 PF02811 PHP domain EYD00_24765 PF14579 Helix-hairpin-helix motif EYD00_24765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EYD00_24765 PF07733 Bacterial DNA polymerase III alpha NTPase domain EYD00_24780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_24780 PF03466 LysR substrate binding domain EYD00_24790 PF03466 LysR substrate binding domain EYD00_24790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_24795 PF00440 Bacterial regulatory proteins, tetR family EYD00_24815 PF00106 short chain dehydrogenase EYD00_24825 PF00106 short chain dehydrogenase EYD00_24830 PF02082 Transcriptional regulator EYD00_24860 PF07859 alpha/beta hydrolase fold EYD00_24870 PF01638 HxlR-like helix-turn-helix EYD00_24880 PF07690 Major Facilitator Superfamily EYD00_24890 PF01177 Asp/Glu/Hydantoin racemase EYD00_24895 PF14525 AraC-binding-like domain EYD00_24895 PF12833 Helix-turn-helix domain EYD00_24900 PF00106 short chain dehydrogenase EYD00_24915 PF01292 Prokaryotic cytochrome b561 EYD00_24920 PF00174 Oxidoreductase molybdopterin binding domain EYD00_24930 PF01817 Chorismate mutase type II EYD00_24930 PF02153 Prephenate dehydrogenase EYD00_24935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_24935 PF03466 LysR substrate binding domain EYD00_24940 PF00106 short chain dehydrogenase EYD00_24945 PF00561 alpha/beta hydrolase fold EYD00_24955 PF17969 L,D-transpeptidase C-terminal domain EYD00_24955 PF03734 L,D-transpeptidase catalytic domain EYD00_24965 PF01810 LysE type translocator EYD00_24970 PF01042 Endoribonuclease L-PSP EYD00_24980 PF00313 'Cold-shock' DNA-binding domain EYD00_25035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EYD00_25040 PF07995 Glucose / Sorbosone dehydrogenase EYD00_25055 PF13416 Bacterial extracellular solute-binding protein EYD00_25065 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_25075 PF08402 TOBE domain EYD00_25075 PF00005 ABC transporter EYD00_25080 PF01380 SIS domain EYD00_25080 PF01418 Helix-turn-helix domain, rpiR family EYD00_25085 PF02203 Tar ligand binding domain homologue EYD00_25085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EYD00_25085 PF00672 HAMP domain EYD00_25105 PF07690 Major Facilitator Superfamily EYD00_25105 PF00083 Sugar (and other) transporter EYD00_25110 PF01161 Phosphatidylethanolamine-binding protein EYD00_25155 PF01850 PIN domain EYD00_25190 PF00216 Bacterial DNA-binding protein EYD00_25215 PF00196 Bacterial regulatory proteins, luxR family EYD00_25215 PF00072 Response regulator receiver domain EYD00_25220 PF07730 Histidine kinase EYD00_25220 PF00672 HAMP domain EYD00_25220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_25235 PF01740 STAS domain EYD00_25235 PF00916 Sulfate permease family EYD00_25245 PF01810 LysE type translocator EYD00_25260 PF06233 Usg-like family EYD00_25265 PF00166 Chaperonin 10 Kd subunit EYD00_25270 PF00118 TCP-1/cpn60 chaperonin family EYD00_25280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_25280 PF00005 ABC transporter EYD00_25285 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_25285 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_25290 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_25310 PF00999 Sodium/hydrogen exchanger family EYD00_25320 PF00384 Molybdopterin oxidoreductase EYD00_25330 PF01226 Formate/nitrite transporter EYD00_25335 PF03466 LysR substrate binding domain EYD00_25335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_25340 PF00196 Bacterial regulatory proteins, luxR family EYD00_25345 PF00072 Response regulator receiver domain EYD00_25345 PF00158 Sigma-54 interaction domain EYD00_25345 PF02954 Bacterial regulatory protein, Fis family EYD00_25365 PF00106 short chain dehydrogenase EYD00_25385 PF12680 SnoaL-like domain EYD00_25385 PF08281 Sigma-70, region 4 EYD00_25385 PF04542 Sigma-70 region 2 EYD00_25390 PF02627 Carboxymuconolactone decarboxylase family EYD00_25395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_25395 PF03466 LysR substrate binding domain EYD00_25410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EYD00_25415 PF13533 Biotin-lipoyl like EYD00_25420 PF00873 AcrB/AcrD/AcrF family EYD00_25430 PF00106 short chain dehydrogenase EYD00_25435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_25435 PF03466 LysR substrate binding domain EYD00_25450 PF08447 PAS fold EYD00_25450 PF00989 PAS fold EYD00_25450 PF00512 His Kinase A (phospho-acceptor) domain EYD00_25450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_25450 PF13426 PAS domain EYD00_25450 PF13493 Domain of unknown function (DUF4118) EYD00_25455 PF02082 Transcriptional regulator EYD00_25465 PF00970 Oxidoreductase FAD-binding domain EYD00_25465 PF00042 Globin EYD00_25465 PF00175 Oxidoreductase NAD-binding domain EYD00_25485 PF02627 Carboxymuconolactone decarboxylase family EYD00_25490 PF00561 alpha/beta hydrolase fold EYD00_25500 PF12833 Helix-turn-helix domain EYD00_25500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD00_25500 PF02805 Metal binding domain of Ada EYD00_25500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD00_25505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EYD00_25505 PF12833 Helix-turn-helix domain EYD00_25505 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EYD00_25505 PF02805 Metal binding domain of Ada EYD00_25520 PF00072 Response regulator receiver domain EYD00_25520 PF00196 Bacterial regulatory proteins, luxR family EYD00_25530 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_25535 PF12911 N-terminal TM domain of oligopeptide transport permease C EYD00_25535 PF00528 Binding-protein-dependent transport system inner membrane component EYD00_25540 PF00005 ABC transporter EYD00_25540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EYD00_25545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EYD00_25550 PF00072 Response regulator receiver domain EYD00_25550 PF00196 Bacterial regulatory proteins, luxR family EYD00_25555 PF13426 PAS domain EYD00_25555 PF08447 PAS fold EYD00_25555 PF13493 Domain of unknown function (DUF4118) EYD00_25555 PF00989 PAS fold EYD00_25555 PF00512 His Kinase A (phospho-acceptor) domain EYD00_25555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_25565 PF00072 Response regulator receiver domain EYD00_25565 PF00196 Bacterial regulatory proteins, luxR family EYD00_25570 PF13533 Biotin-lipoyl like EYD00_25575 PF00211 Adenylate and Guanylate cyclase catalytic domain EYD00_25575 PF00069 Protein kinase domain EYD00_25590 PF00196 Bacterial regulatory proteins, luxR family EYD00_25600 PF00989 PAS fold EYD00_25600 PF00512 His Kinase A (phospho-acceptor) domain EYD00_25600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EYD00_25605 PF00196 Bacterial regulatory proteins, luxR family EYD00_25605 PF00072 Response regulator receiver domain EYD00_25615 PF13533 Biotin-lipoyl like EYD00_25620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_25620 PF03466 LysR substrate binding domain EYD00_25630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EYD00_25630 PF03466 LysR substrate binding domain EYD00_25635 PF00106 short chain dehydrogenase EYD00_25645 PF00072 Response regulator receiver domain EYD00_25705 PF01272 Transcription elongation factor, GreA/GreB, C-term EYD00_25705 PF14760 Rnk N-terminus EYD00_25715 PF13298 DNA polymerase Ligase (LigD) EYD00_25715 PF01068 ATP dependent DNA ligase domain EYD00_25715 PF04679 ATP dependent DNA ligase C terminal region EYD00_25730 PF00011 Hsp20/alpha crystallin family EYD00_25735 PF13298 DNA polymerase Ligase (LigD) EYD00_25735 PF01068 ATP dependent DNA ligase domain EYD00_25735 PF04679 ATP dependent DNA ligase C terminal region EYD00_25740 PF02735 Ku70/Ku80 beta-barrel domain EYD00_25745 PF02735 Ku70/Ku80 beta-barrel domain EYD00_25770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EYD00_25775 PF03480 Bacterial extracellular solute-binding protein, family 7 EYD00_25780 PF00072 Response regulator receiver domain EYD00_25780 PF00196 Bacterial regulatory proteins, luxR family EYD00_25785 PF07730 Histidine kinase EYD00_25785 PF17200 Single Cache domain 2