locus-tag	class	description
AGROH133_02802	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AGROH133_02803	COG0424	maF-like protein
AGROH133_02804	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AGROH133_02805	COG0237	dephospho-CoA kinase activity
AGROH133_02806	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AGROH133_02807	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AGROH133_02808	COG3030	protein affecting phage T7 exclusion by the F plasmid
AGROH133_02814	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AGROH133_02818	COG0187	DNA topoisomerase II activity
AGROH133_02820	COG0179	Fumarylacetoacetate (FAA) hydrolase
AGROH133_02823	COG0135	phosphoribosylanthranilate isomerase activity
AGROH133_02824	COG0133	tryptophan synthase activity
AGROH133_02825	COG0159	tryptophan synthase activity
AGROH133_02826	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AGROH133_02827	COG0285	dihydrofolate synthase activity
AGROH133_02829	COG1074	ATP-dependent DNA helicase activity
AGROH133_02831	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AGROH133_02832	COG0802	atpase or kinase
AGROH133_02833	COG2205	protein histidine kinase activity
AGROH133_02835	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AGROH133_02836	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AGROH133_02837	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AGROH133_02837	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AGROH133_02838	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AGROH133_02839	COG0642	Histidine kinase
AGROH133_02842	COG0745	RESPONSE REGULATOR receiver
AGROH133_02844	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AGROH133_02846	COG1652	LysM domain
AGROH133_02847	COG1072	(Pantothenic acid kinase))
AGROH133_02848	COG0140	phosphoribosyl-ATP diphosphatase activity
AGROH133_02849	COG0107	imidazoleglycerol-phosphate synthase activity
AGROH133_02850	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AGROH133_02851	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AGROH133_02856	COG0131	Imidazoleglycerol-phosphate dehydratase
AGROH133_02857	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AGROH133_02858	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AGROH133_02861	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AGROH133_02865	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
AGROH133_02872	COG1643	Atp-dependent helicase
AGROH133_02880	COG0514	ATP-dependent DNA helicase (RecQ)
AGROH133_02896	COG1072	(Pantothenic acid kinase))
AGROH133_02898	COG1780	Probably involved in ribonucleotide reductase function
AGROH133_02904	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AGROH133_02910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_02921	COG2813	Specifically methylates the guanine in position
AGROH133_02922	COG1185	polyribonucleotide nucleotidyltransferase activity
AGROH133_02923	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AGROH133_02924	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AGROH133_02925	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AGROH133_02926	COG3064	Membrane
AGROH133_02926	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AGROH133_02929	COG0779	Required for maturation of 30S ribosomal subunits
AGROH133_02930	COG2814	Major facilitator Superfamily
AGROH133_02941	COG2951	lytic endotransglycosylase activity
AGROH133_02943	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AGROH133_02945	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AGROH133_02946	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AGROH133_02948	COG2816	NAD+ diphosphatase activity
AGROH133_02949	COG0077	Prephenate dehydratase
AGROH133_02949	COG1605	Chorismate mutase
AGROH133_02950	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AGROH133_02951	COG3474	cytochrome
AGROH133_02956	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AGROH133_02958	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AGROH133_02961	COG1278	Cold shock
AGROH133_02962	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGROH133_02965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AGROH133_02965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AGROH133_02967	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AGROH133_02993	COG2900	Belongs to the SlyX family
AGROH133_02995	COG0484	heat shock protein binding
AGROH133_02996	COG0443	Heat shock 70 kDa protein
AGROH133_03003	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AGROH133_03025	COG0295	cytidine deaminase activity
AGROH133_03027	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AGROH133_03028	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AGROH133_03030	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AGROH133_03031	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AGROH133_03032	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AGROH133_03036	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AGROH133_03040	COG1845	cytochrome c oxidase, subunit III
AGROH133_03046	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGROH133_03061	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AGROH133_03066	COG0477	Major facilitator Superfamily
AGROH133_03081	COG0067	glutamate synthase
AGROH133_03081	COG0069	glutamate synthase activity
AGROH133_03081	COG0070	glutamate synthase
AGROH133_03082	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AGROH133_03087	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AGROH133_03089	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AGROH133_03110	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_03125	COG0848	biopolymer transport protein
AGROH133_03129	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AGROH133_03133	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AGROH133_03134	COG3454	Phosphonate metabolism
AGROH133_03135	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AGROH133_03136	COG3639	organic phosphonate transmembrane transporter activity
AGROH133_03141	COG3639	organic phosphonate transmembrane transporter activity
AGROH133_03149	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AGROH133_03151	COG4778	phosphonate C-P lyase system protein PhnL
AGROH133_03152	COG4107	phosphonate C-P lyase system protein PhnK
AGROH133_03153	COG3627	carbon phosphorus lyase activity
AGROH133_03156	COG3626	phosphonate metabolism
AGROH133_03157	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AGROH133_03158	COG3624	Phosphonate C-P lyase system protein PhnG
AGROH133_03159	COG2188	Transcriptional regulator
AGROH133_03161	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AGROH133_03162	COG0837	glucose binding
AGROH133_03163	COG1803	Methylglyoxal synthase
AGROH133_03164	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
AGROH133_03166	COG4166	transmembrane transport
AGROH133_03168	COG4174	ABC transporter (Permease)
AGROH133_03176	COG4239	(ABC) transporter, permease
AGROH133_03183	COG4172	Belongs to the ABC transporter superfamily
AGROH133_03184	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_03186	COG0174	glutamine synthetase
AGROH133_03187	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_03188	COG3265	gluconokinase activity
AGROH133_03189	COG1174	glycine betaine transport
AGROH133_03196	COG1125	glycine betaine transport
AGROH133_03197	COG1174	glycine betaine transport
AGROH133_03209	COG1732	Glycine betaine
AGROH133_03223	COG1959	2 iron, 2 sulfur cluster binding
AGROH133_03225	COG1840	ABC-type Fe3 transport system, periplasmic component
AGROH133_03232	COG0697	spore germination
AGROH133_03257	COG0791	NLP P60 protein
AGROH133_03260	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AGROH133_03261	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AGROH133_03277	COG4964	Belongs to the GSP D family
AGROH133_03300	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AGROH133_03301	COG3422	double-strand break repair
AGROH133_03302	COG3757	hydrolase, family 25
AGROH133_03304	COG0697	spore germination
AGROH133_03315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGROH133_03322	COG0481	GTPase activity
AGROH133_03323	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AGROH133_03332	COG1917	Cupin 2, conserved barrel domain protein
AGROH133_03332	COG2169	Transcriptional regulator
AGROH133_03341	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
AGROH133_03352	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AGROH133_03353	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AGROH133_03354	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AGROH133_03356	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AGROH133_03357	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AGROH133_03357	COG0072	phenylalanine-tRNA ligase activity
AGROH133_03358	COG0667	Aldo Keto reductase
AGROH133_03364	COG4977	sequence-specific DNA binding
AGROH133_03377	COG1570	exodeoxyribonuclease VII activity
AGROH133_03378	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_03380	COG1846	Transcriptional regulator
AGROH133_03381	COG0697	spore germination
AGROH133_03392	COG2309	aminopeptidase activity
AGROH133_03394	COG1393	Belongs to the ArsC family
AGROH133_03398	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AGROH133_03398	COG0519	Catalyzes the synthesis of GMP from XMP
AGROH133_03401	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AGROH133_03416	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AGROH133_03419	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AGROH133_03421	COG1968	undecaprenyl-diphosphatase activity
AGROH133_03434	COG0284	orotidine-5'-phosphate decarboxylase activity
AGROH133_03436	COG3963	phosphatidate phosphatase activity
AGROH133_03437	COG0592	DNA-directed DNA polymerase activity
AGROH133_03438	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AGROH133_03439	COG0792	nuclease activity
AGROH133_03444	COG1175	transmembrane transport
AGROH133_03451	COG0395	ABC-type sugar transport system, permease component
AGROH133_03458	COG3842	ATPase activity
AGROH133_03460	COG0189	ligase activity
AGROH133_03462	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AGROH133_03463	COG1280	lysine exporter protein (LysE YggA)
AGROH133_03471	COG0756	dUTP diphosphatase activity
AGROH133_03472	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AGROH133_03473	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AGROH133_03482	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AGROH133_03483	COG2226	methyltransferase
AGROH133_03484	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AGROH133_03485	COG1024	Enoyl-CoA hydratase
AGROH133_03486	COG0268	Binds directly to 16S ribosomal RNA
AGROH133_03487	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AGROH133_03488	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AGROH133_03489	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AGROH133_03490	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AGROH133_03491	COG1420	regulation of RNA biosynthetic process
AGROH133_03492	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AGROH133_03493	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AGROH133_03494	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AGROH133_03498	COG1137	ATPase activity
AGROH133_03499	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AGROH133_03503	COG0616	signal peptide processing
AGROH133_03505	COG0776	regulation of translation
AGROH133_03511	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AGROH133_03512	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AGROH133_03517	COG2205	protein histidine kinase activity
AGROH133_03517	COG0784	Response regulator, receiver
AGROH133_03517	COG5002	protein histidine kinase activity
AGROH133_03521	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AGROH133_03522	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AGROH133_03523	COG0728	peptidoglycan biosynthetic process
AGROH133_03537	COG0180	Tryptophanyl-tRNA synthetase
AGROH133_03539	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AGROH133_03540	COG1214	PFAM Peptidase M22, glycoprotease
AGROH133_03541	COG0456	acetyltransferase
AGROH133_03541	COG1214	PFAM Peptidase M22, glycoprotease
AGROH133_03545	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AGROH133_03546	COG1702	phosphate starvation-inducible protein PhoH
AGROH133_03547	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AGROH133_03549	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AGROH133_03557	COG1396	sequence-specific DNA binding
AGROH133_03559	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AGROH133_03560	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AGROH133_03561	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_03565	COG0242	peptide deformylase activity
AGROH133_03566	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AGROH133_03567	COG0101	tRNA pseudouridine synthase activity
AGROH133_03574	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGROH133_03575	COG2171	N-acyltransferase activity
AGROH133_03577	COG0840	transmembrane signaling receptor activity
AGROH133_03581	COG0071	Belongs to the small heat shock protein (HSP20) family
AGROH133_03596	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AGROH133_03599	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AGROH133_03600	COG0706	membrane insertase activity
AGROH133_03606	COG0594	ribonuclease P activity
AGROH133_03607	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AGROH133_03609	COG0840	transmembrane signaling receptor activity
AGROH133_03617	COG2226	methyltransferase
AGROH133_03618	COG3842	ATPase activity
AGROH133_03619	COG1175	transmembrane transport
AGROH133_03626	COG0395	ABC-type sugar transport system, permease component
AGROH133_03637	COG0427	acetyl-CoA hydrolase
AGROH133_03640	COG3938	Belongs to the proline racemase family
AGROH133_03641	COG0418	dihydroorotase activity
AGROH133_03642	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AGROH133_03646	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AGROH133_03647	COG0166	Belongs to the GPI family
AGROH133_03649	COG0318	PFAM AMP-dependent synthetase and ligase
AGROH133_03650	COG3842	ATPase activity
AGROH133_03651	COG1840	ABC-type Fe3 transport system, periplasmic component
AGROH133_03653	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AGROH133_03666	COG4774	siderophore transport
AGROH133_03682	COG2326	polyphosphate kinase activity
AGROH133_03683	COG5002	protein histidine kinase activity
AGROH133_03685	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AGROH133_03687	COG0573	inorganic phosphate transmembrane transporter activity
AGROH133_03704	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AGROH133_03705	COG0704	Plays a role in the regulation of phosphate uptake
AGROH133_03706	COG0745	RESPONSE REGULATOR receiver
AGROH133_03709	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AGROH133_03710	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AGROH133_03711	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AGROH133_03712	COG2967	ApaG domain
AGROH133_03714	COG0717	Belongs to the dCTP deaminase family
AGROH133_03716	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AGROH133_03762	COG0167	dihydroorotate dehydrogenase activity
AGROH133_03783	COG1959	2 iron, 2 sulfur cluster binding
AGROH133_03785	COG1201	RNA secondary structure unwinding
AGROH133_03802	COG1960	acyl-CoA dehydrogenase activity
AGROH133_03803	COG0183	Belongs to the thiolase family
AGROH133_03804	COG1250	3-hydroxyacyl-CoA dehydrogenase
AGROH133_03804	COG1024	Enoyl-CoA hydratase
AGROH133_03808	COG1320	monovalent cation:proton antiporter activity
AGROH133_03813	COG2212	antiporter activity
AGROH133_03817	COG1863	multisubunit Na H antiporter MnhE subunit
AGROH133_03821	COG0651	ATP synthesis coupled electron transport
AGROH133_03837	COG1006	Multisubunit Na H antiporter MnhC subunit
AGROH133_03841	COG2111	Na H antiporter
AGROH133_03841	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AGROH133_03870	COG0840	transmembrane signaling receptor activity
AGROH133_03873	COG2198	Histidine kinase
AGROH133_03873	COG0643	Histidine kinase
AGROH133_03874	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AGROH133_03875	COG2201	protein-glutamate methylesterase activity
AGROH133_03876	COG0745	RESPONSE REGULATOR receiver
AGROH133_03877	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AGROH133_03879	COG1766	The M ring may be actively involved in energy transduction
AGROH133_03882	COG2771	luxR family
AGROH133_03886	COG0840	transmembrane signaling receptor activity
AGROH133_03886	COG2972	Histidine kinase
AGROH133_03892	COG0784	Response regulator, receiver
AGROH133_03892	COG2198	Histidine kinase
AGROH133_03892	COG2205	protein histidine kinase activity
AGROH133_03907	COG1970	mechanosensitive ion channel activity
AGROH133_03911	COG0436	Aminotransferase
AGROH133_03916	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AGROH133_03917	COG0424	maF-like protein
AGROH133_03918	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AGROH133_03920	COG5328	Belongs to the UPF0262 family
AGROH133_03921	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AGROH133_03923	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AGROH133_03928	COG1338	Plays a role in the flagellum-specific transport system
AGROH133_03936	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AGROH133_03941	COG1706	bacterial-type flagellum-dependent cell motility
AGROH133_03943	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AGROH133_03946	COG4786	Flagellar basal body rod
AGROH133_03947	COG1677	Flagellar hook-basal body complex protein FliE
AGROH133_03948	COG1558	bacterial-type flagellum-dependent cell motility
AGROH133_03949	COG1815	bacterial-type flagellum-dependent cell motility
AGROH133_03952	COG1157	protein secretion by the type III secretion system
AGROH133_03953	COG4786	Flagellar basal body rod
AGROH133_03955	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AGROH133_03960	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AGROH133_03961	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AGROH133_03962	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AGROH133_03963	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AGROH133_03972	COG1360	Flagellar Motor Protein
AGROH133_03982	COG1749	Flagellar hook protein flgE
AGROH133_03986	COG5443	negative regulation of bacterial-type flagellum assembly
AGROH133_03987	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AGROH133_03991	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AGROH133_04015	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AGROH133_04016	COG1609	Transcriptional regulator
AGROH133_04018	COG1653	transport
AGROH133_04020	COG1175	transmembrane transport
AGROH133_04028	COG0395	ABC-type sugar transport system, permease component
AGROH133_04036	COG0366	Alpha amylase catalytic
AGROH133_04037	COG3842	ATPase activity
AGROH133_04041	COG0129	dihydroxy-acid dehydratase activity
AGROH133_04042	COG0363	glucosamine-6-phosphate deaminase activity
AGROH133_04043	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AGROH133_04045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_04047	COG2081	HI0933 family
AGROH133_04052	COG2224	Isocitrate lyase
AGROH133_04057	COG3842	ATPase activity
AGROH133_04058	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_04065	COG1177	transmembrane transport
AGROH133_04086	COG2205	protein histidine kinase activity
AGROH133_04088	COG0248	Ppx GppA phosphatase
AGROH133_04089	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AGROH133_04090	COG0477	Major facilitator Superfamily
AGROH133_04114	COG0521	Mo-molybdopterin cofactor biosynthetic process
AGROH133_04115	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AGROH133_04119	COG0142	geranyltranstransferase activity
AGROH133_04125	COG0752	glycyl-tRNA synthetase alpha subunit
AGROH133_04126	COG1704	LemA family
AGROH133_04128	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AGROH133_04136	COG0751	glycine-tRNA ligase activity
AGROH133_04137	COG1683	Conserved Protein
AGROH133_04138	COG0840	transmembrane signaling receptor activity
AGROH133_04145	COG0151	Belongs to the GarS family
AGROH133_04146	COG2183	response to ionizing radiation
AGROH133_04147	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGROH133_04161	COG0583	DNA-binding transcription factor activity
AGROH133_04166	COG0306	phosphate transporter
AGROH133_04181	COG0561	phosphatase activity
AGROH133_04182	COG0438	transferase activity, transferring glycosyl groups
AGROH133_04183	COG2186	Transcriptional regulator
AGROH133_04188	COG0583	DNA-binding transcription factor activity
AGROH133_04190	COG0277	FAD linked oxidase domain protein
AGROH133_04191	COG0277	FAD linked oxidase domain protein
AGROH133_04192	COG0247	lactate metabolic process
AGROH133_04195	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_04197	COG2818	Glycosylase
AGROH133_04200	COG2855	membrane
AGROH133_04212	COG0583	DNA-binding transcription factor activity
AGROH133_04217	COG0124	histidyl-tRNA synthetase
AGROH133_04219	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AGROH133_04220	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AGROH133_04221	COG2259	Doxx family
AGROH133_04227	COG0459	protein refolding
AGROH133_04228	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AGROH133_04230	COG0196	riboflavin kinase activity
AGROH133_04232	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AGROH133_04234	COG0590	tRNA wobble adenosine to inosine editing
AGROH133_04235	COG1187	pseudouridine synthase activity
AGROH133_04236	COG0742	ribosomal rna small subunit methyltransferase
AGROH133_04237	COG1752	Esterase of the alpha-beta hydrolase superfamily
AGROH133_04251	COG0312	modulator of DNA gyrase
AGROH133_04255	COG1519	Transferase
AGROH133_04257	COG1663	tetraacyldisaccharide 4'-kinase activity
AGROH133_04261	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AGROH133_04262	COG2205	protein histidine kinase activity
AGROH133_04262	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_04263	COG3300	MHYT domain
AGROH133_04263	COG5001	Diguanylate cyclase
AGROH133_04264	COG3386	PFAM SMP-30 Gluconolaconase
AGROH133_04265	COG0800	Aldolase
AGROH133_04266	COG3734	2-keto-3-deoxy-galactonokinase
AGROH133_04267	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_04270	COG2197	response regulator
AGROH133_04275	COG0598	Magnesium transport protein CorA
AGROH133_04278	COG3158	transport of potassium into the cell
AGROH133_04297	COG0356	it plays a direct role in the translocation of protons across the membrane
AGROH133_04307	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AGROH133_04309	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AGROH133_04318	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AGROH133_04322	COG0009	L-threonylcarbamoyladenylate synthase
AGROH133_04325	COG4638	Rieske (2fe-2S)
AGROH133_04337	COG1960	acyl-CoA dehydrogenase activity
AGROH133_04341	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AGROH133_04342	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AGROH133_04343	COG0840	transmembrane signaling receptor activity
AGROH133_04351	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AGROH133_04352	COG1741	Belongs to the pirin family
AGROH133_04353	COG1722	exodeoxyribonuclease VII activity
AGROH133_04354	COG0123	including yeast histone deacetylase and acetoin utilization protein
AGROH133_04355	COG1268	BioY protein
AGROH133_04361	COG1268	BioY protein
AGROH133_04362	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AGROH133_04366	COG1122	ATPase activity
AGROH133_04367	COG3214	Protein conserved in bacteria
AGROH133_04369	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AGROH133_04373	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AGROH133_04374	COG0484	heat shock protein binding
AGROH133_04376	COG0259	pyridoxamine-phosphate oxidase activity
AGROH133_04387	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGROH133_04389	COG0312	modulator of DNA gyrase
AGROH133_04396	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AGROH133_04409	COG0109	protoheme IX farnesyltransferase activity
AGROH133_04421	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
AGROH133_04434	COG3346	SURF1 family
AGROH133_04437	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AGROH133_04438	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AGROH133_04439	COG0328	RNA-DNA hybrid ribonuclease activity
AGROH133_04444	COG0678	peroxiredoxin activity
AGROH133_04444	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AGROH133_04447	COG1678	Uncharacterized ACR, COG1678
AGROH133_04460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGROH133_04461	COG0612	Peptidase, M16
AGROH133_04466	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGROH133_04471	COG2189	Belongs to the N(4) N(6)-methyltransferase family
AGROH133_04473	COG1194	a g-specific adenine glycosylase
AGROH133_04475	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AGROH133_04478	COG1196	nuclear chromosome segregation
AGROH133_04479	COG2514	catechol 2,3-dioxygenase activity
AGROH133_04481	COG0574	Belongs to the PEP-utilizing enzyme family
AGROH133_04481	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AGROH133_04503	COG0579	oxidoreductase
AGROH133_04511	COG2895	sulfate adenylyltransferase (ATP) activity
AGROH133_04512	COG0175	sulfate reduction
AGROH133_04513	COG0175	sulfate reduction
AGROH133_04514	COG1959	2 iron, 2 sulfur cluster binding
AGROH133_04515	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AGROH133_04518	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AGROH133_04526	COG4208	sulfate ABC transporter
AGROH133_04532	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AGROH133_04534	COG2200	EAL domain
AGROH133_04534	COG2203	Gaf domain
AGROH133_04534	COG2199	diguanylate cyclase activity
AGROH133_04536	COG1309	transcriptional regulator
AGROH133_04538	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_04539	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
AGROH133_04561	COG0477	Major facilitator Superfamily
AGROH133_04577	COG1793	dna ligase
AGROH133_04577	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AGROH133_04588	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_04590	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_04592	COG1846	Transcriptional regulator
AGROH133_04593	COG1764	response to oxidative stress
AGROH133_04597	COG0488	(ABC) transporter
AGROH133_04603	COG0583	DNA-binding transcription factor activity
AGROH133_04605	COG4221	oxidoreductase activity
AGROH133_04608	COG0433	COG0433 Predicted ATPase
AGROH133_04611	COG1733	regulation of RNA biosynthetic process
AGROH133_04612	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
AGROH133_04615	COG1280	lysine exporter protein (LysE YggA)
AGROH133_04621	COG0656	L-ascorbic acid biosynthetic process
AGROH133_04622	COG2378	regulation of single-species biofilm formation
AGROH133_04625	COG4106	trans-aconitate 2-methyltransferase activity
AGROH133_04626	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AGROH133_04627	COG0840	transmembrane signaling receptor activity
AGROH133_04630	COG0583	DNA-binding transcription factor activity
AGROH133_04635	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AGROH133_04645	COG3909	cytochrome
AGROH133_04648	COG2010	Cytochrome c
AGROH133_04663	COG0789	Transcriptional regulator
AGROH133_04676	COG4176	ABC-type proline glycine betaine transport system permease component
AGROH133_04689	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_04692	COG2169	Transcriptional regulator
AGROH133_04692	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AGROH133_04703	COG2514	catechol 2,3-dioxygenase activity
AGROH133_04706	COG1272	protein, Hemolysin III
AGROH133_04715	COG1280	lysine exporter protein (LysE YggA)
AGROH133_04721	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AGROH133_04742	COG2111	Na H antiporter
AGROH133_04747	COG1006	Multisubunit Na H antiporter MnhC subunit
AGROH133_04752	COG1863	multisubunit Na H antiporter MnhE subunit
AGROH133_04756	COG2212	antiporter activity
AGROH133_04760	COG1320	monovalent cation:proton antiporter activity
AGROH133_04765	COG4957	zinc ion binding
AGROH133_04768	COG2166	iron-sulfur cluster assembly
AGROH133_04771	COG2205	protein histidine kinase activity
AGROH133_04785	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGROH133_04795	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AGROH133_04799	COG2983	Belongs to the UPF0260 family
AGROH133_04823	COG1621	beta-fructofuranosidase activity
AGROH133_04824	COG3920	Histidine kinase
AGROH133_04824	COG2202	Pas domain
AGROH133_04825	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AGROH133_04840	COG4695	Portal protein
AGROH133_04874	COG0745	RESPONSE REGULATOR receiver
AGROH133_04875	COG0642	Histidine kinase
AGROH133_04881	COG4235	cytochrome complex assembly
AGROH133_04884	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AGROH133_04887	COG1138	Cytochrome C-type biogenesis protein
AGROH133_04903	COG3088	subunit of a heme lyase
AGROH133_04907	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGROH133_04910	COG0745	RESPONSE REGULATOR receiver
AGROH133_04915	COG3011	Protein conserved in bacteria
AGROH133_04917	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AGROH133_04918	COG2202	Pas domain
AGROH133_04918	COG2205	protein histidine kinase activity
AGROH133_04922	COG0308	aminopeptidase N
AGROH133_04936	COG0443	Heat shock 70 kDa protein
AGROH133_04938	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_04953	COG0604	alcohol dehydrogenase
AGROH133_04954	COG1733	regulation of RNA biosynthetic process
AGROH133_04955	COG1968	undecaprenyl-diphosphatase activity
AGROH133_04964	COG2239	Acts as a magnesium transporter
AGROH133_04968	COG2814	Major facilitator Superfamily
AGROH133_04986	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AGROH133_04997	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGROH133_05011	COG0741	lytic transglycosylase activity
AGROH133_05014	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_05015	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AGROH133_05016	COG0840	transmembrane signaling receptor activity
AGROH133_05018	COG1758	RNA polymerase activity
AGROH133_05025	COG0736	holo-[acyl-carrier-protein] synthase activity
AGROH133_05026	COG0681	Belongs to the peptidase S26 family
AGROH133_05028	COG0571	ribonuclease III activity
AGROH133_05029	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AGROH133_05030	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGROH133_05032	COG0784	Response regulator, receiver
AGROH133_05033	COG1381	Involved in DNA repair and RecF pathway recombination
AGROH133_05047	COG2226	methyltransferase
AGROH133_05049	COG1418	mRNA catabolic process
AGROH133_05078	COG0346	lactoylglutathione lyase activity
AGROH133_05083	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_05090	COG3443	Belongs to the bacterial solute-binding protein 9 family
AGROH133_05092	COG0668	transmembrane transport
AGROH133_05097	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AGROH133_05106	COG1742	UPF0060 membrane protein
AGROH133_05112	COG0745	RESPONSE REGULATOR receiver
AGROH133_05112	COG3706	GGDEF domain
AGROH133_05114	COG1183	phosphatidylcholine synthase activity
AGROH133_05123	COG0688	phosphatidylethanolamine metabolic process
AGROH133_05125	COG5265	(ABC) transporter
AGROH133_05153	COG2852	Protein conserved in bacteria
AGROH133_05154	COG0215	cysteine-tRNA ligase activity
AGROH133_05155	COG4221	oxidoreductase activity
AGROH133_05156	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AGROH133_05157	COG1286	toxin biosynthetic process
AGROH133_05164	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AGROH133_05167	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AGROH133_05200	COG0359	binds to the 23S rRNA
AGROH133_05209	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AGROH133_05210	COG0360	Binds together with S18 to 16S ribosomal RNA
AGROH133_05212	COG0667	Aldo Keto reductase
AGROH133_05213	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AGROH133_05215	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGROH133_05216	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGROH133_05218	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AGROH133_05220	COG1561	YicC-like family, N-terminal region
AGROH133_05221	COG0194	GDP metabolic process
AGROH133_05223	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AGROH133_05224	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AGROH133_05228	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AGROH133_05245	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AGROH133_05256	COG0488	(ABC) transporter
AGROH133_05259	COG0105	UTP biosynthetic process
AGROH133_05271	COG0314	molybdopterin synthase activity
AGROH133_05273	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AGROH133_05277	COG0322	excinuclease ABC activity
AGROH133_05278	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_05281	COG0625	glutathione transferase activity
AGROH133_05293	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AGROH133_05294	COG0243	molybdopterin cofactor binding
AGROH133_05299	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AGROH133_05300	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AGROH133_05301	COG0628	permease
AGROH133_05311	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AGROH133_05312	COG0248	Ppx GppA phosphatase
AGROH133_05318	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AGROH133_05325	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AGROH133_05326	COG0477	Major facilitator Superfamily
AGROH133_05327	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AGROH133_05328	COG4452	Inner membrane protein CreD
AGROH133_05335	COG0659	secondary active sulfate transmembrane transporter activity
AGROH133_05350	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AGROH133_05352	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AGROH133_05357	COG0113	porphobilinogen synthase activity
AGROH133_05366	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AGROH133_05367	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AGROH133_05368	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AGROH133_05368	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AGROH133_05370	COG1280	lysine exporter protein (LysE YggA)
AGROH133_05377	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AGROH133_05378	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AGROH133_05379	COG2814	Major facilitator Superfamily
AGROH133_05392	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AGROH133_05412	COG0416	fatty acid biosynthetic process
AGROH133_05413	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AGROH133_05414	COG0776	regulation of translation
AGROH133_05432	COG0601	transmembrane transport
AGROH133_05439	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_05447	COG0444	Belongs to the ABC transporter superfamily
AGROH133_05449	COG0747	negative chemotaxis
AGROH133_05452	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AGROH133_05464	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGROH133_05466	COG3706	GGDEF domain
AGROH133_05466	COG0745	RESPONSE REGULATOR receiver
AGROH133_05474	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AGROH133_05475	COG0583	DNA-binding transcription factor activity
AGROH133_05478	COG0737	Belongs to the 5'-nucleotidase family
AGROH133_05485	COG2897	thiosulfate sulfurtransferase activity
AGROH133_05489	COG0415	Belongs to the DNA photolyase family
AGROH133_05491	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AGROH133_05499	COG3932	Exopolysaccharide synthesis, ExoD
AGROH133_05507	COG1238	metal cluster binding
AGROH133_05515	COG4139	cobalamin transport
AGROH133_05525	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AGROH133_05526	COG3794	PFAM blue (type 1) copper domain protein
AGROH133_05528	COG1528	Iron-storage protein
AGROH133_05569	COG1612	heme a metabolic process
AGROH133_05579	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AGROH133_05580	COG0010	Belongs to the arginase family
AGROH133_05581	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AGROH133_05582	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AGROH133_05594	COG1832	CoA-binding protein
AGROH133_05597	COG2124	cytochrome p450
AGROH133_05598	COG2199	diguanylate cyclase activity
AGROH133_05606	COG0740	serine-type endopeptidase activity
AGROH133_05607	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AGROH133_05609	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AGROH133_05611	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AGROH133_05618	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGROH133_05623	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGROH133_05624	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGROH133_05626	COG0649	NAD binding
AGROH133_05629	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AGROH133_05630	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AGROH133_05632	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AGROH133_05642	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AGROH133_05649	COG0713	ATP synthesis coupled electron transport
AGROH133_05686	COG1007	ATP synthesis coupled electron transport
AGROH133_05700	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AGROH133_05700	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AGROH133_05706	COG0442	prolyl-tRNA aminoacylation
AGROH133_05712	COG1136	(ABC) transporter
AGROH133_05713	COG0587	DNA-directed DNA polymerase activity
AGROH133_05716	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AGROH133_05718	COG0784	Response regulator, receiver
AGROH133_05719	COG0745	RESPONSE REGULATOR receiver
AGROH133_05719	COG3706	GGDEF domain
AGROH133_05720	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AGROH133_05721	COG0477	Major facilitator Superfamily
AGROH133_05738	COG0557	exoribonuclease II activity
AGROH133_05739	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AGROH133_05741	COG0758	DNA mediated transformation
AGROH133_05742	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AGROH133_05748	COG0540	Belongs to the ATCase OTCase family
AGROH133_05749	COG1960	acyl-CoA dehydrogenase activity
AGROH133_05750	COG0456	acetyltransferase
AGROH133_05755	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AGROH133_05756	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AGROH133_05757	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AGROH133_05758	COG0154	amidase activity
AGROH133_05759	COG3811	Belongs to the UPF0386 family
AGROH133_05765	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AGROH133_05767	COG0456	acetyltransferase
AGROH133_05772	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AGROH133_05774	COG0511	ligase activity, forming carbon-carbon bonds
AGROH133_05775	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AGROH133_05778	COG0436	Aminotransferase
AGROH133_05783	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_05784	COG1530	ribonuclease E activity
AGROH133_05787	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AGROH133_05794	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AGROH133_05795	COG0384	phenazine biosynthesis protein PhzF
AGROH133_05800	COG0633	Ferredoxin
AGROH133_05805	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AGROH133_05806	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AGROH133_05809	COG3768	UPF0283 membrane protein
AGROH133_05812	COG3106	COG3106 Predicted ATPase
AGROH133_05814	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AGROH133_05824	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AGROH133_05862	COG0537	adenosine 5'-monophosphoramidase activity
AGROH133_05869	COG0052	Belongs to the universal ribosomal protein uS2 family
AGROH133_05870	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AGROH133_05871	COG0528	UMP kinase activity
AGROH133_05872	COG0233	cytoplasmic translational termination
AGROH133_05873	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AGROH133_05874	COG0575	Belongs to the CDS family
AGROH133_05884	COG0750	zinc metalloprotease
AGROH133_05889	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AGROH133_05892	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AGROH133_05893	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AGROH133_05894	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AGROH133_05895	COG3494	Protein of unknown function (DUF1009)
AGROH133_05896	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AGROH133_05897	COG0372	Belongs to the citrate synthase family
AGROH133_05913	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AGROH133_05915	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AGROH133_05917	COG0148	phosphopyruvate hydratase activity
AGROH133_05920	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AGROH133_05921	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGROH133_05921	COG0022	dehydrogenase e1 component
AGROH133_05922	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGROH133_05924	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AGROH133_05929	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AGROH133_05930	COG0697	spore germination
AGROH133_05944	COG2867	negative regulation of translational initiation
AGROH133_05946	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AGROH133_05946	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AGROH133_05948	COG3852	Histidine kinase
AGROH133_05949	COG2204	response regulator
AGROH133_05951	COG5000	phosphorelay sensor kinase activity
AGROH133_05957	COG2204	response regulator
AGROH133_05959	COG0569	domain protein
AGROH133_05960	COG1923	regulation of RNA biosynthetic process
AGROH133_05962	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AGROH133_05963	COG3956	TIGRFAM MazG family protein
AGROH133_05965	COG1648	precorrin-2 dehydrogenase activity
AGROH133_05965	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AGROH133_05985	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AGROH133_05985	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AGROH133_05986	COG0509	glycine decarboxylation via glycine cleavage system
AGROH133_05987	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AGROH133_05997	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AGROH133_06002	COG0564	pseudouridine synthase activity
AGROH133_06007	COG1309	transcriptional regulator
AGROH133_06008	COG0251	oxidation-reduction process
AGROH133_06009	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AGROH133_06018	COG1671	Belongs to the UPF0178 family
AGROH133_06020	COG0450	alkyl hydroperoxide reductase
AGROH133_06022	COG0625	glutathione transferase activity
AGROH133_06036	COG2801	Transposase and inactivated derivatives
AGROH133_06038	COG0583	DNA-binding transcription factor activity
AGROH133_06040	COG2828	Protein conserved in bacteria
AGROH133_06044	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_06050	COG0784	Response regulator, receiver
AGROH133_06050	COG4191	Histidine kinase
AGROH133_06051	COG0784	Response regulator, receiver
AGROH133_06052	COG3920	Histidine kinase
AGROH133_06052	COG2202	Pas domain
AGROH133_06053	COG0784	Response regulator, receiver
AGROH133_06053	COG4191	Histidine kinase
AGROH133_06062	COG0673	inositol 2-dehydrogenase activity
AGROH133_06064	COG1609	Transcriptional regulator
AGROH133_06066	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_06077	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_06089	COG1129	ABC transporter
AGROH133_06090	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_06092	COG0328	RNA-DNA hybrid ribonuclease activity
AGROH133_06098	COG2226	methyltransferase
AGROH133_06111	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AGROH133_06111	COG0321	lipoyl(octanoyl) transferase activity
AGROH133_06112	COG0084	hydrolase, TatD family'
AGROH133_06113	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AGROH133_06115	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AGROH133_06135	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AGROH133_06136	COG2095	MarC family integral membrane protein
AGROH133_06149	COG0629	single-stranded DNA binding
AGROH133_06150	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AGROH133_06152	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AGROH133_06185	COG3685	Protein conserved in bacteria
AGROH133_06200	COG0616	signal peptide processing
AGROH133_06220	COG0179	Fumarylacetoacetate (FAA) hydrolase
AGROH133_06224	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AGROH133_06232	COG1121	(ABC) transporter
AGROH133_06233	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AGROH133_06238	COG0667	Aldo Keto reductase
AGROH133_06241	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AGROH133_06302	COG2239	Acts as a magnesium transporter
AGROH133_06308	COG0243	molybdopterin cofactor binding
AGROH133_06310	COG0242	peptide deformylase activity
AGROH133_06320	COG0321	lipoyl(octanoyl) transferase activity
AGROH133_06321	COG1064	alcohol dehydrogenase
AGROH133_06357	COG2124	cytochrome p450
AGROH133_06363	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGROH133_06365	COG0626	cystathionine gamma-synthase activity
AGROH133_06366	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_06369	COG4597	amino acid ABC transporter
AGROH133_06379	COG0765	amino acid transport
AGROH133_06388	COG1126	abc transporter atp-binding protein
AGROH133_06392	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AGROH133_06396	COG0436	Aminotransferase
AGROH133_06410	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGROH133_06413	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AGROH133_06414	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGROH133_06415	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AGROH133_06421	COG3243	poly(R)-hydroxyalkanoic acid synthase
AGROH133_06422	COG1489	DNA binding
AGROH133_06423	COG0024	Methionine aminopeptidase
AGROH133_06424	COG2003	Belongs to the UPF0758 family
AGROH133_06429	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AGROH133_06433	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AGROH133_06434	COG0546	phosphoglycolate phosphatase activity
AGROH133_06437	COG0114	fumarate hydratase activity
AGROH133_06440	COG0504	CTP synthase activity
AGROH133_06445	COG0149	triose-phosphate isomerase activity
AGROH133_06448	COG0187	DNA topoisomerase II activity
AGROH133_06449	COG0740	serine-type endopeptidase activity
AGROH133_06451	COG0640	Transcriptional regulator
AGROH133_06452	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AGROH133_06459	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AGROH133_06459	COG3264	Mechanosensitive ion channel
AGROH133_06504	COG1127	ABC transporter
AGROH133_06505	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AGROH133_06512	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_06515	COG0280	phosphate acetyltransferase
AGROH133_06515	COG0281	malic enzyme
AGROH133_06517	COG0778	Nitroreductase
AGROH133_06518	COG0823	Involved in the tonB-independent uptake of proteins
AGROH133_06521	COG1368	sulfuric ester hydrolase activity
AGROH133_06536	COG0544	peptidyl-prolyl cis-trans isomerase activity
AGROH133_06540	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AGROH133_06548	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AGROH133_06553	COG0512	Glutamine amidotransferase of anthranilate synthase
AGROH133_06553	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AGROH133_06554	COG0343	queuine tRNA-ribosyltransferase activity
AGROH133_06555	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AGROH133_06556	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AGROH133_06557	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AGROH133_06560	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AGROH133_06571	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AGROH133_06572	COG0134	indole-3-glycerol-phosphate synthase activity
AGROH133_06573	COG0315	cyclic pyranopterin monophosphate synthase activity
AGROH133_06574	COG0303	'Molybdopterin
AGROH133_06575	COG3706	GGDEF domain
AGROH133_06577	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AGROH133_06577	COG0475	glutathione-regulated potassium exporter activity
AGROH133_06591	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AGROH133_06592	COG0697	spore germination
AGROH133_06602	COG2814	Major facilitator Superfamily
AGROH133_06616	COG0746	molybdenum cofactor guanylyltransferase activity
AGROH133_06617	COG1763	Mo-molybdopterin cofactor biosynthetic process
AGROH133_06618	COG0739	heme binding
AGROH133_06619	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGROH133_06620	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AGROH133_06621	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AGROH133_06622	COG0805	protein transport
AGROH133_06629	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AGROH133_06631	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AGROH133_06633	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AGROH133_06634	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AGROH133_06635	COG1472	Belongs to the glycosyl hydrolase 3 family
AGROH133_06637	COG0018	arginyl-trna synthetase
AGROH133_06638	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AGROH133_06639	COG0316	Belongs to the HesB IscA family
AGROH133_06648	COG0525	valine-tRNA ligase activity
AGROH133_06650	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGROH133_06661	COG0655	NAD(P)H dehydrogenase (quinone) activity
AGROH133_06662	COG1546	Belongs to the CinA family
AGROH133_06662	COG1058	Belongs to the CinA family
AGROH133_06663	COG0589	response to stress
AGROH133_06664	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AGROH133_06665	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AGROH133_06670	COG1914	H( )-stimulated, divalent metal cation uptake system
AGROH133_06684	COG1132	(ABC) transporter
AGROH133_06689	COG0628	permease
AGROH133_06706	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AGROH133_06708	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AGROH133_06710	COG0302	gtp cyclohydrolase
AGROH133_06711	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AGROH133_06712	COG1752	Esterase of the alpha-beta hydrolase superfamily
AGROH133_06713	COG0516	GMP reductase activity
AGROH133_06713	COG0517	IMP dehydrogenase activity
AGROH133_06729	COG1760	l-serine dehydratase
AGROH133_06738	COG0583	DNA-binding transcription factor activity
AGROH133_06744	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AGROH133_06744	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AGROH133_06746	COG0347	Belongs to the P(II) protein family
AGROH133_06747	COG0174	glutamine synthetase
AGROH133_06765	COG0697	spore germination
AGROH133_06780	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AGROH133_06782	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AGROH133_06790	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AGROH133_06791	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AGROH133_06792	COG2186	Transcriptional regulator
AGROH133_06818	COG1129	ABC transporter
AGROH133_06819	COG1183	phosphatidylcholine synthase activity
AGROH133_06826	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGROH133_06827	COG0679	Auxin Efflux Carrier
AGROH133_06838	COG0785	Cytochrome C biogenesis protein
AGROH133_06853	COG0346	lactoylglutathione lyase activity
AGROH133_06854	COG1278	Cold shock
AGROH133_06899	COG0577	efflux transmembrane transporter activity
AGROH133_06899	COG1136	(ABC) transporter
AGROH133_06900	COG1136	(ABC) transporter
AGROH133_06900	COG0577	efflux transmembrane transporter activity
AGROH133_06908	COG2151	metal-sulfur cluster biosynthetic enzyme
AGROH133_06909	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AGROH133_06910	COG0719	Fe-S assembly protein
AGROH133_06911	COG0396	ATPase activity
AGROH133_06912	COG0719	Fe-S assembly protein
AGROH133_06913	COG1104	cysteine desulfurase activity
AGROH133_06914	COG2945	thiolester hydrolase activity
AGROH133_06915	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AGROH133_06916	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AGROH133_06919	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AGROH133_06920	COG2833	Protein of unknown function (DUF455)
AGROH133_06921	COG0739	heme binding
AGROH133_06923	COG0513	Belongs to the DEAD box helicase family
AGROH133_06937	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AGROH133_06939	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AGROH133_06940	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AGROH133_06941	COG0047	phosphoribosylformylglycinamidine synthase activity
AGROH133_06945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGROH133_06950	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AGROH133_06956	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AGROH133_06957	COG2814	Major facilitator Superfamily
AGROH133_06970	COG0483	inositol monophosphate 1-phosphatase activity
AGROH133_06971	COG0483	inositol monophosphate 1-phosphatase activity
AGROH133_06972	COG0037	tRNA processing
AGROH133_06973	COG2066	Belongs to the glutaminase family
AGROH133_06974	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AGROH133_06975	COG0861	Integral membrane protein TerC family
AGROH133_06999	COG1280	lysine exporter protein (LysE YggA)
AGROH133_07008	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AGROH133_07009	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AGROH133_07012	COG0538	isocitrate dehydrogenase activity
AGROH133_07015	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AGROH133_07016	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AGROH133_07017	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_07018	COG2313	pseudouridylate synthase activity
AGROH133_07021	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_07023	COG4215	(ABC) transporter
AGROH133_07037	COG5425	PFAM Usg family protein
AGROH133_07039	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGROH133_07041	COG1522	sequence-specific DNA binding
AGROH133_07042	COG1573	uracil-dna glycosylase
AGROH133_07046	COG2205	protein histidine kinase activity
AGROH133_07046	COG2202	Pas domain
AGROH133_07055	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AGROH133_07056	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AGROH133_07068	COG0842	Transport permease protein
AGROH133_07075	COG1131	(ABC) transporter
AGROH133_07076	COG0730	response to heat
AGROH133_07087	COG0840	transmembrane signaling receptor activity
AGROH133_07087	COG0840	transmembrane signaling receptor activity
AGROH133_07091	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AGROH133_07092	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AGROH133_07098	COG0129	dihydroxy-acid dehydratase activity
AGROH133_07099	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AGROH133_07100	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AGROH133_07113	COG3739	integral membrane protein
AGROH133_07122	COG0203	ribosomal protein L17
AGROH133_07123	COG0202	RNA polymerase activity
AGROH133_07124	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AGROH133_07125	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AGROH133_07126	COG0563	adenylate kinase activity
AGROH133_07127	COG0201	protein transport
AGROH133_07136	COG0200	Binds to the 23S rRNA
AGROH133_07137	COG1841	ribosomal large subunit assembly
AGROH133_07138	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AGROH133_07139	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AGROH133_07140	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AGROH133_07141	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AGROH133_07142	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AGROH133_07143	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AGROH133_07144	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AGROH133_07145	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AGROH133_07146	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AGROH133_07147	COG0255	Belongs to the universal ribosomal protein uL29 family
AGROH133_07148	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AGROH133_07149	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AGROH133_07150	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AGROH133_07151	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AGROH133_07152	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AGROH133_07153	COG0089	rRNA binding
AGROH133_07154	COG0088	Forms part of the polypeptide exit tunnel
AGROH133_07155	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AGROH133_07156	COG0051	transcription antitermination factor activity, RNA binding
AGROH133_07157	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AGROH133_07158	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AGROH133_07159	COG0049	tRNA binding
AGROH133_07160	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AGROH133_07165	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AGROH133_07166	COG0085	RNA polymerase activity
AGROH133_07167	COG0222	ribosome binding
AGROH133_07168	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AGROH133_07169	COG0081	regulation of translation
AGROH133_07170	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AGROH133_07176	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AGROH133_07177	COG0861	Integral membrane protein TerC family
AGROH133_07191	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AGROH133_07192	COG1607	acyl-coa hydrolase
AGROH133_07212	COG2910	NAD(P)H-binding
AGROH133_07213	COG1733	regulation of RNA biosynthetic process
AGROH133_07219	COG0556	nucleotide-excision repair
AGROH133_07222	COG2382	esterase
AGROH133_07228	COG0484	heat shock protein binding
AGROH133_07236	COG3842	ATPase activity
AGROH133_07237	COG3833	ABC-type maltose transport systems, permease component
AGROH133_07250	COG1840	ABC-type Fe3 transport system, periplasmic component
AGROH133_07252	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGROH133_07255	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AGROH133_07258	COG2207	Transcriptional regulator
AGROH133_07260	COG1064	alcohol dehydrogenase
AGROH133_07261	COG1252	NADH dehydrogenase
AGROH133_07263	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AGROH133_07264	COG2197	response regulator
AGROH133_07266	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AGROH133_07267	COG1090	epimerase
AGROH133_07292	COG0656	L-ascorbic acid biosynthetic process
AGROH133_07295	COG0440	acetolactate synthase activity
AGROH133_07296	COG0028	Belongs to the TPP enzyme family
AGROH133_07298	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AGROH133_07299	COG3830	Belongs to the UPF0237 family
AGROH133_07299	COG0560	Phosphoserine phosphatase
AGROH133_07304	COG0330	HflC and HflK could
AGROH133_07307	COG0330	HflC and HflK could
AGROH133_07309	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AGROH133_07310	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AGROH133_07319	COG0277	FAD linked oxidase domain protein
AGROH133_07320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AGROH133_07358	COG1335	isochorismatase
AGROH133_07370	COG0006	proline dipeptidase activity
AGROH133_07372	COG2264	protein methyltransferase activity
AGROH133_07373	COG1999	signal sequence binding
AGROH133_07378	COG0835	chemotaxis
AGROH133_07381	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AGROH133_07382	COG0583	DNA-binding transcription factor activity
AGROH133_07394	COG1247	-acetyltransferase
AGROH133_07396	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AGROH133_07398	COG1280	lysine exporter protein (LysE YggA)
AGROH133_07404	COG0497	DNA recombination
AGROH133_07405	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AGROH133_07407	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AGROH133_07408	COG0849	cell division
AGROH133_07409	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AGROH133_07410	COG1181	Belongs to the D-alanine--D-alanine ligase family
AGROH133_07411	COG0477	Major facilitator Superfamily
AGROH133_07423	COG3706	GGDEF domain
AGROH133_07426	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AGROH133_07427	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AGROH133_07429	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AGROH133_07441	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AGROH133_07443	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AGROH133_07455	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AGROH133_07459	COG0275	rRNA processing
AGROH133_07460	COG2001	Belongs to the MraZ family
AGROH133_07466	COG3023	N-Acetylmuramoyl-L-alanine amidase
AGROH133_07467	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AGROH133_07480	COG4106	trans-aconitate 2-methyltransferase activity
AGROH133_07489	COG2267	carboxylic ester hydrolase activity
AGROH133_07490	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AGROH133_07493	COG0251	oxidation-reduction process
AGROH133_07496	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_07499	COG2814	Major facilitator Superfamily
AGROH133_07518	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_07519	COG0174	glutamine synthetase
AGROH133_07520	COG0531	amino acid
AGROH133_07533	COG1737	Transcriptional regulator
AGROH133_07553	COG3842	ATPase activity
AGROH133_07559	COG0477	Major facilitator Superfamily
AGROH133_07587	COG2968	Membrane
AGROH133_07591	COG0432	Pfam Uncharacterised protein family UPF0047
AGROH133_07595	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGROH133_07596	COG0358	DNA primase activity
AGROH133_07598	COG0505	Belongs to the CarA family
AGROH133_07599	COG0534	Mate efflux family protein
AGROH133_07620	COG2321	neutral zinc metallopeptidase
AGROH133_07633	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AGROH133_07634	COG3706	GGDEF domain
AGROH133_07642	COG1573	uracil-dna glycosylase
AGROH133_07644	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AGROH133_07646	COG1522	sequence-specific DNA binding
AGROH133_07647	COG0492	ferredoxin-NADP+ reductase activity
AGROH133_07649	COG0583	DNA-binding transcription factor activity
AGROH133_07653	COG1902	pentaerythritol trinitrate reductase activity
AGROH133_07665	COG0387	Pfam Sodium calcium exchanger
AGROH133_07678	COG2199	diguanylate cyclase activity
AGROH133_07678	COG2200	EAL domain
AGROH133_07696	COG1278	Cold shock
AGROH133_07697	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGROH133_07701	COG1846	Transcriptional regulator
AGROH133_07702	COG0745	RESPONSE REGULATOR receiver
AGROH133_07703	COG2205	protein histidine kinase activity
AGROH133_07706	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AGROH133_07711	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AGROH133_07724	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AGROH133_07732	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AGROH133_07747	COG0840	transmembrane signaling receptor activity
AGROH133_07750	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_07753	COG5001	Diguanylate cyclase
AGROH133_07753	COG3300	MHYT domain
AGROH133_07760	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AGROH133_07761	COG5001	Diguanylate cyclase
AGROH133_07766	COG0193	aminoacyl-tRNA hydrolase activity
AGROH133_07768	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AGROH133_07772	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AGROH133_07773	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AGROH133_07776	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AGROH133_07776	COG2857	Cytochrome c1
AGROH133_07795	COG1132	(ABC) transporter
AGROH133_07802	COG1132	(ABC) transporter
AGROH133_07809	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AGROH133_07820	COG0408	coproporphyrinogen oxidase activity
AGROH133_07823	COG0617	tRNA 3'-terminal CCA addition
AGROH133_07826	COG0714	Associated with various cellular activities
AGROH133_07837	COG0454	-acetyltransferase
AGROH133_07838	COG0477	Major facilitator Superfamily
AGROH133_07852	COG0435	Glutathione S-transferase
AGROH133_07856	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AGROH133_07857	COG3135	benzoate transporter
AGROH133_07870	COG4944	Protein of unknown function (DUF1109)
AGROH133_07881	COG0740	serine-type endopeptidase activity
AGROH133_07893	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AGROH133_07894	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AGROH133_07908	COG4175	Glycine betaine
AGROH133_07920	COG1435	thymidine kinase activity
AGROH133_07929	COG2862	Uncharacterized protein family, UPF0114
AGROH133_07937	COG0512	Glutamine amidotransferase of anthranilate synthase
AGROH133_07937	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AGROH133_07940	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AGROH133_07942	COG0366	Alpha amylase catalytic
AGROH133_07943	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_07946	COG1160	GTP binding
AGROH133_07957	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AGROH133_07978	COG0024	Methionine aminopeptidase
AGROH133_07980	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_07981	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_07983	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AGROH133_07985	COG0583	DNA-binding transcription factor activity
AGROH133_07997	COG0402	S-adenosylhomocysteine deaminase activity
AGROH133_08015	COG1309	transcriptional regulator
AGROH133_08017	COG1686	Belongs to the peptidase S11 family
AGROH133_08021	COG2351	hydroxyisourate hydrolase activity
AGROH133_08022	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
AGROH133_08027	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AGROH133_08030	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_08030	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AGROH133_08031	COG0784	Response regulator, receiver
AGROH133_08031	COG5002	protein histidine kinase activity
AGROH133_08031	COG2205	protein histidine kinase activity
AGROH133_08032	COG0513	Belongs to the DEAD box helicase family
AGROH133_08044	COG2259	Doxx family
AGROH133_08049	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_08062	COG2308	Evidence 4 Homologs of previously reported genes of
AGROH133_08064	COG1305	Transglutaminase-like
AGROH133_08070	COG4214	carbohydrate transport
AGROH133_08082	COG1129	ABC transporter
AGROH133_08083	COG4213	ABC transporter substrate-binding protein
AGROH133_08097	COG0840	transmembrane signaling receptor activity
AGROH133_08106	COG4215	(ABC) transporter
AGROH133_08112	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_08129	COG1215	transferase activity, transferring glycosyl groups
AGROH133_08134	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AGROH133_08140	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AGROH133_08141	COG2346	COG2346, Truncated hemoglobins
AGROH133_08150	COG1309	transcriptional regulator
AGROH133_08154	COG0494	nUDIX hydrolase
AGROH133_08156	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_08163	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_08193	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AGROH133_08194	COG0830	nickel cation binding
AGROH133_08195	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
AGROH133_08199	COG0804	urea catabolic process
AGROH133_08200	COG1442	glycosyl transferase family 8
AGROH133_08201	COG3755	Protein conserved in bacteria
AGROH133_08204	COG0832	Belongs to the urease beta subunit family
AGROH133_08205	COG3813	Protein conserved in bacteria
AGROH133_08206	COG0831	urea catabolic process
AGROH133_08207	COG0829	nickel cation binding
AGROH133_08223	COG0559	Belongs to the binding-protein-dependent transport system permease family
AGROH133_08236	COG0174	glutamine synthetase
AGROH133_08237	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_08238	COG0784	Response regulator, receiver
AGROH133_08238	COG2198	Histidine kinase
AGROH133_08238	COG5002	protein histidine kinase activity
AGROH133_08265	COG0411	ABC transporter
AGROH133_08288	COG1218	3'(2'),5'-bisphosphate nucleotidase
AGROH133_08308	COG0564	pseudouridine synthase activity
AGROH133_08311	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AGROH133_08315	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AGROH133_08334	COG0346	lactoylglutathione lyase activity
AGROH133_08336	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AGROH133_08338	COG2832	Protein of unknown function (DUF454)
AGROH133_08342	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AGROH133_08343	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_08353	COG4558	Periplasmic binding protein
AGROH133_08356	COG3721	Heme iron utilization protein
AGROH133_08363	COG2205	protein histidine kinase activity
AGROH133_08392	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_08402	COG4605	iron ion homeostasis
AGROH133_08413	COG4604	ABC transporter, ATP-binding protein
AGROH133_08414	COG0783	Belongs to the Dps family
AGROH133_08417	COG0840	transmembrane signaling receptor activity
AGROH133_08417	COG2972	Histidine kinase
AGROH133_08422	COG2814	Major facilitator Superfamily
AGROH133_08437	COG0583	DNA-binding transcription factor activity
AGROH133_08440	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_08458	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AGROH133_08461	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AGROH133_08462	COG0288	reversible hydration of carbon dioxide
AGROH133_08464	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AGROH133_08484	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AGROH133_08494	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AGROH133_08495	COG0778	Nitroreductase
AGROH133_08496	COG2267	carboxylic ester hydrolase activity
AGROH133_08497	COG0251	oxidation-reduction process
AGROH133_08498	COG1335	isochorismatase
AGROH133_08499	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_08501	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_08505	COG1175	transmembrane transport
AGROH133_08512	COG0395	ABC-type sugar transport system, permease component
AGROH133_08519	COG3842	ATPase activity
AGROH133_08520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_08522	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AGROH133_08526	COG4608	Belongs to the ABC transporter superfamily
AGROH133_08527	COG0444	Belongs to the ABC transporter superfamily
AGROH133_08534	COG0601	transmembrane transport
AGROH133_08549	COG0392	lysyltransferase activity
AGROH133_08549	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AGROH133_08584	COG2159	amidohydrolase
AGROH133_08585	COG1960	acyl-CoA dehydrogenase activity
AGROH133_08595	COG0745	RESPONSE REGULATOR receiver
AGROH133_08598	COG1902	pentaerythritol trinitrate reductase activity
AGROH133_08598	COG0446	pyridine nucleotide-disulphide oxidoreductase
AGROH133_08599	COG3842	ATPase activity
AGROH133_08619	COG1840	ABC-type Fe3 transport system, periplasmic component
AGROH133_08621	COG1840	ABC-type Fe3 transport system, periplasmic component
AGROH133_08628	COG1192	Involved in chromosome partitioning
AGROH133_08629	COG2201	protein-glutamate methylesterase activity
AGROH133_08630	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AGROH133_08631	COG0835	chemotaxis
AGROH133_08632	COG0840	transmembrane signaling receptor activity
AGROH133_08636	COG0835	chemotaxis
AGROH133_08637	COG0643	Histidine kinase
AGROH133_08637	COG2198	Histidine kinase
AGROH133_08638	COG0745	RESPONSE REGULATOR receiver
AGROH133_08659	COG0277	FAD linked oxidase domain protein
AGROH133_08661	COG1017	nitric oxide dioxygenase activity
AGROH133_08661	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AGROH133_08669	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AGROH133_08672	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_08674	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AGROH133_08688	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AGROH133_08694	COG0583	DNA-binding transcription factor activity
AGROH133_08697	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_08698	COG0725	ABC transporter, periplasmic molybdate-binding protein
AGROH133_08700	COG4149	molybdate abc transporter
AGROH133_08706	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AGROH133_08709	COG2022	thiamine diphosphate biosynthetic process
AGROH133_08712	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AGROH133_08713	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGROH133_08715	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AGROH133_08719	COG1132	(ABC) transporter
AGROH133_08723	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AGROH133_08734	COG0438	transferase activity, transferring glycosyl groups
AGROH133_08738	COG4166	transmembrane transport
AGROH133_08740	COG0601	transmembrane transport
AGROH133_08741	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_08748	COG0438	transferase activity, transferring glycosyl groups
AGROH133_08749	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AGROH133_08750	COG3142	Participates in the control of copper homeostasis
AGROH133_08767	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_08768	COG1737	Transcriptional regulator
AGROH133_08771	COG3842	ATPase activity
AGROH133_08775	COG0395	ABC-type sugar transport system, permease component
AGROH133_08795	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AGROH133_08796	COG1940	carbohydrate kinase activity
AGROH133_08799	COG0671	phosphoesterase, PA-phosphatase related
AGROH133_08806	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AGROH133_08807	COG0156	8-amino-7-oxononanoate synthase activity
AGROH133_08810	COG0729	surface antigen
AGROH133_08816	COG0835	chemotaxis
AGROH133_08818	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AGROH133_08819	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AGROH133_08820	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AGROH133_08821	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AGROH133_08822	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AGROH133_08823	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AGROH133_08831	COG4974	Belongs to the 'phage' integrase family
AGROH133_08840	COG1280	lysine exporter protein (LysE YggA)
AGROH133_08851	COG0508	dehydrogenase complex catalyzes the overall conversion of
AGROH133_08853	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AGROH133_08854	COG0045	succinate-CoA ligase (ADP-forming) activity
AGROH133_08855	COG0039	L-malate dehydrogenase activity
AGROH133_08856	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AGROH133_08871	COG2264	protein methyltransferase activity
AGROH133_08874	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AGROH133_08876	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AGROH133_08877	COG0181	hydroxymethylbilane synthase activity
AGROH133_08898	COG1872	DUF167
AGROH133_08899	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AGROH133_08902	COG0339	signal peptide processing
AGROH133_08904	COG1846	Transcriptional regulator
AGROH133_08920	COG0137	argininosuccinate synthase activity
AGROH133_08922	COG1280	lysine exporter protein (LysE YggA)
AGROH133_08930	COG4120	Belongs to the binding-protein-dependent transport system permease family
AGROH133_08941	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AGROH133_08945	COG2154	pterin-4-alpha-carbinolamine dehydratase
AGROH133_08946	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AGROH133_08947	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AGROH133_08951	COG4181	ATPase activity
AGROH133_08964	COG0670	Belongs to the BI1 family
AGROH133_08975	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AGROH133_08976	COG4133	protoheme IX ABC transporter activity
AGROH133_08977	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AGROH133_08985	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AGROH133_08996	COG3706	GGDEF domain
AGROH133_09007	COG2917	probably involved in intracellular septation
AGROH133_09014	COG0552	protein localization to endoplasmic reticulum
AGROH133_09015	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AGROH133_09016	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AGROH133_09020	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AGROH133_09021	COG1605	Chorismate mutase
AGROH133_09021	COG0287	Prephenate dehydrogenase
AGROH133_09022	COG0228	four-way junction DNA binding
AGROH133_09023	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AGROH133_09024	COG0336	Belongs to the RNA methyltransferase TrmD family
AGROH133_09034	COG0335	large ribosomal subunit rRNA binding
AGROH133_09035	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
AGROH133_09040	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_09043	COG3547	Transposase (IS116 IS110 IS902 family)
AGROH133_09059	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AGROH133_09060	COG4783	chaperone-mediated protein folding
AGROH133_09063	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AGROH133_09083	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AGROH133_09085	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AGROH133_09086	COG0142	geranyltranstransferase activity
AGROH133_09087	COG2885	chlorophyll binding
AGROH133_09090	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AGROH133_09091	COG2223	nitrite transmembrane transporter activity
AGROH133_09104	COG1349	DNA-binding transcription factor activity
AGROH133_09106	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AGROH133_09107	COG2197	response regulator
AGROH133_09109	COG1132	(ABC) transporter
AGROH133_09116	COG3459	Glycosyltransferase 36 associated
AGROH133_09123	COG1473	amidohydrolase
AGROH133_09124	COG0579	oxidoreductase
AGROH133_09126	COG0129	dihydroxy-acid dehydratase activity
AGROH133_09127	COG2084	Dehydrogenase
AGROH133_09128	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGROH133_09129	COG0277	FAD linked oxidase domain protein
AGROH133_09130	COG2186	Transcriptional regulator
AGROH133_09133	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AGROH133_09138	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AGROH133_09152	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AGROH133_09154	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGROH133_09158	COG0495	leucyl-tRNA aminoacylation
AGROH133_09163	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AGROH133_09165	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGROH133_09166	COG1946	Acyl-CoA thioesterase
AGROH133_09167	COG0347	Belongs to the P(II) protein family
AGROH133_09168	COG0004	ammonium transporteR
AGROH133_09182	COG1674	ftsk spoiiie
AGROH133_09190	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AGROH133_09193	COG0745	RESPONSE REGULATOR receiver
AGROH133_09195	COG1329	Transcriptional regulator
AGROH133_09196	COG2902	Dehydrogenase
AGROH133_09197	COG2270	Major facilitator Superfamily
AGROH133_09212	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_09216	COG0494	nUDIX hydrolase
AGROH133_09219	COG0793	Belongs to the peptidase S41A family
AGROH133_09225	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AGROH133_09226	COG0799	negative regulation of ribosome biogenesis
AGROH133_09227	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AGROH133_09228	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AGROH133_09229	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AGROH133_09230	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AGROH133_09233	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AGROH133_09234	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AGROH133_09241	COG0066	3-isopropylmalate dehydratase activity
AGROH133_09242	COG0473	3-isopropylmalate dehydrogenase activity
AGROH133_09243	COG1858	cytochrome C peroxidase
AGROH133_09245	COG1797	cobyrinic acid a,c-diamide synthase activity
AGROH133_09246	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AGROH133_09246	COG1648	precorrin-2 dehydrogenase activity
AGROH133_09247	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
AGROH133_09261	COG1492	cobalamin metabolic process
AGROH133_09268	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_09269	COG3254	rhamnose metabolic process
AGROH133_09270	COG0246	Mannitol dehydrogenase
AGROH133_09271	COG1063	alcohol dehydrogenase
AGROH133_09276	COG4214	carbohydrate transport
AGROH133_09287	COG1129	ABC transporter
AGROH133_09288	COG2186	Transcriptional regulator
AGROH133_09289	COG2721	sulfolactate sulfo-lyase activity
AGROH133_09290	COG0138	bifunctional purine biosynthesis protein purh
AGROH133_09292	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AGROH133_09292	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AGROH133_09293	COG0501	Belongs to the peptidase M48B family
AGROH133_09300	COG1475	DNA binding
AGROH133_09302	COG1192	Involved in chromosome partitioning
AGROH133_09303	COG0357	Ribosomal RNA small subunit methyltransferase G
AGROH133_09304	COG0445	tRNA wobble uridine modification
AGROH133_09306	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AGROH133_09307	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AGROH133_09314	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AGROH133_09321	COG2161	toxin-antitoxin pair type II binding
AGROH133_09369	COG3501	Rhs element vgr protein
AGROH133_09397	COG1522	sequence-specific DNA binding
AGROH133_09400	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGROH133_09401	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGROH133_09403	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AGROH133_09404	COG2423	ornithine cyclodeaminase activity
AGROH133_09405	COG0006	proline dipeptidase activity
AGROH133_09406	COG3608	succinylglutamate desuccinylase aspartoacylase
AGROH133_09407	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_09409	COG0765	amino acid transport
AGROH133_09413	COG0765	amino acid transport
AGROH133_09419	COG1126	abc transporter atp-binding protein
AGROH133_09423	COG1309	transcriptional regulator
AGROH133_09424	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_09427	COG1595	DNA-templated transcription, initiation
AGROH133_09452	COG3046	protein related to deoxyribodipyrimidine photolyase
AGROH133_09453	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AGROH133_09457	COG3706	GGDEF domain
AGROH133_09457	COG2203	Gaf domain
AGROH133_09457	COG4251	negative regulation of phosphorylation
AGROH133_09457	COG5001	Diguanylate cyclase
AGROH133_09465	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGROH133_09476	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AGROH133_09495	COG0753	catalase activity
AGROH133_09497	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AGROH133_09502	COG0640	Transcriptional regulator
AGROH133_09503	COG5265	(ABC) transporter
AGROH133_09509	COG3181	Tripartite tricarboxylate transporter family receptor
AGROH133_09511	COG2197	response regulator
AGROH133_09513	COG3237	CsbD-like
AGROH133_09519	COG0745	RESPONSE REGULATOR receiver
AGROH133_09523	COG0456	acetyltransferase
AGROH133_09539	COG3383	formate dehydrogenase (NAD+) activity
AGROH133_09545	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AGROH133_09546	COG1802	Transcriptional regulator
AGROH133_09548	COG4608	Belongs to the ABC transporter superfamily
AGROH133_09549	COG0444	Belongs to the ABC transporter superfamily
AGROH133_09550	COG0402	S-adenosylhomocysteine deaminase activity
AGROH133_09552	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_09569	COG0402	S-adenosylhomocysteine deaminase activity
AGROH133_09573	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AGROH133_09575	COG0765	amino acid transport
AGROH133_09585	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_09590	COG3938	Belongs to the proline racemase family
AGROH133_09592	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_09596	COG0765	amino acid transport
AGROH133_09610	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AGROH133_09611	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_09613	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AGROH133_09614	COG0784	Response regulator, receiver
AGROH133_09618	COG1486	melibiose metabolic process
AGROH133_09619	COG4172	Belongs to the ABC transporter superfamily
AGROH133_09620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_09627	COG0601	transmembrane transport
AGROH133_09635	COG0747	negative chemotaxis
AGROH133_09638	COG1486	melibiose metabolic process
AGROH133_09657	COG1940	carbohydrate kinase activity
AGROH133_09659	COG2182	Extracellular solute-binding protein
AGROH133_09669	COG0395	ABC-type sugar transport system, permease component
AGROH133_09676	COG0165	Argininosuccinate lyase
AGROH133_09677	COG3842	ATPase activity
AGROH133_09678	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_09679	COG3119	arylsulfatase activity
AGROH133_09682	COG0583	DNA-binding transcription factor activity
AGROH133_09684	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_09694	COG1733	regulation of RNA biosynthetic process
AGROH133_09695	COG1120	ATPase activity
AGROH133_09696	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_09707	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_09719	COG4774	siderophore transport
AGROH133_09721	COG2207	Transcriptional regulator
AGROH133_09724	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AGROH133_09728	COG5002	protein histidine kinase activity
AGROH133_09731	COG0745	RESPONSE REGULATOR receiver
AGROH133_09746	COG1392	Phosphate transport regulator
AGROH133_09747	COG0306	phosphate transporter
AGROH133_09756	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AGROH133_09758	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AGROH133_09760	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_09761	COG3300	MHYT domain
AGROH133_09761	COG5001	Diguanylate cyclase
AGROH133_09773	COG0747	negative chemotaxis
AGROH133_09776	COG2186	Transcriptional regulator
AGROH133_09777	COG0601	transmembrane transport
AGROH133_09784	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_09791	COG0444	Belongs to the ABC transporter superfamily
AGROH133_09792	COG4608	Belongs to the ABC transporter superfamily
AGROH133_09793	COG3842	ATPase activity
AGROH133_09794	COG0395	ABC-type sugar transport system, permease component
AGROH133_09811	COG1233	COG1233 Phytoene dehydrogenase and related
AGROH133_09813	COG1609	Transcriptional regulator
AGROH133_09818	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AGROH133_09819	COG4774	siderophore transport
AGROH133_09821	COG1120	ATPase activity
AGROH133_09822	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_09832	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_09848	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AGROH133_09849	COG1088	dTDP-glucose 4,6-dehydratase activity
AGROH133_09850	COG1091	dTDP-4-dehydrorhamnose reductase activity
AGROH133_09851	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AGROH133_09854	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AGROH133_09855	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AGROH133_09864	COG0546	phosphoglycolate phosphatase activity
AGROH133_09864	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AGROH133_09886	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AGROH133_09918	COG3959	Transketolase, thiamine diphosphate binding domain
AGROH133_09919	COG3958	Transketolase
AGROH133_09920	COG0463	Glycosyl transferase, family 2
AGROH133_09926	COG2801	Transposase and inactivated derivatives
AGROH133_09928	COG1132	(ABC) transporter
AGROH133_09936	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_09944	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_09946	COG0179	Fumarylacetoacetate (FAA) hydrolase
AGROH133_09948	COG0385	Bile acid
AGROH133_09974	COG1401	restriction endodeoxyribonuclease activity
AGROH133_09983	COG2814	Major facilitator Superfamily
AGROH133_10019	COG0745	RESPONSE REGULATOR receiver
AGROH133_10020	COG2205	protein histidine kinase activity
AGROH133_10024	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_10038	COG1764	response to oxidative stress
AGROH133_10041	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AGROH133_10061	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AGROH133_10064	COG1414	Transcriptional regulator
AGROH133_10067	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_10081	COG0747	negative chemotaxis
AGROH133_10083	COG0601	transmembrane transport
AGROH133_10091	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_10099	COG4172	Belongs to the ABC transporter superfamily
AGROH133_10101	COG1027	Aspartate ammonia-lyase
AGROH133_10102	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_10103	COG1126	abc transporter atp-binding protein
AGROH133_10104	COG0765	amino acid transport
AGROH133_10112	COG0765	amino acid transport
AGROH133_10117	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_10123	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_10124	COG1802	Transcriptional regulator
AGROH133_10125	COG3842	ATPase activity
AGROH133_10126	COG4209	transmembrane transport
AGROH133_10133	COG0395	ABC-type sugar transport system, permease component
AGROH133_10140	COG1653	transport
AGROH133_10143	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_10146	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AGROH133_10148	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_10150	COG0071	Belongs to the small heat shock protein (HSP20) family
AGROH133_10153	COG0438	transferase activity, transferring glycosyl groups
AGROH133_10169	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AGROH133_10198	COG2197	response regulator
AGROH133_10201	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AGROH133_10202	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AGROH133_10203	COG4310	Domain of unknown function (DUF2172)
AGROH133_10204	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AGROH133_10206	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AGROH133_10207	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AGROH133_10208	COG2197	response regulator
AGROH133_10217	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGROH133_10241	COG4178	(ABC) transporter
AGROH133_10247	COG3706	GGDEF domain
AGROH133_10253	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AGROH133_10256	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AGROH133_10258	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AGROH133_10261	COG1177	transmembrane transport
AGROH133_10269	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_10276	COG3842	ATPase activity
AGROH133_10280	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AGROH133_10284	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_10285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_10292	COG0601	transmembrane transport
AGROH133_10300	COG0747	negative chemotaxis
AGROH133_10309	COG1522	sequence-specific DNA binding
AGROH133_10313	COG0477	Major facilitator Superfamily
AGROH133_10329	COG0583	DNA-binding transcription factor activity
AGROH133_10337	COG0583	DNA-binding transcription factor activity
AGROH133_10343	COG0747	negative chemotaxis
AGROH133_10345	COG0601	transmembrane transport
AGROH133_10363	COG1278	Cold shock
AGROH133_10367	COG5002	protein histidine kinase activity
AGROH133_10367	COG2198	Histidine kinase
AGROH133_10367	COG0784	Response regulator, receiver
AGROH133_10371	COG0405	Gamma-glutamyltransferase
AGROH133_10380	COG0601	transmembrane transport
AGROH133_10388	COG0747	negative chemotaxis
AGROH133_10391	COG2186	Transcriptional regulator
AGROH133_10416	COG1595	DNA-templated transcription, initiation
AGROH133_10418	COG0395	ABC-type sugar transport system, permease component
AGROH133_10426	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_10439	COG0765	amino acid transport
AGROH133_10445	COG0765	amino acid transport
AGROH133_10450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_10452	COG2186	Transcriptional regulator
AGROH133_10455	COG1063	alcohol dehydrogenase
AGROH133_10456	COG3284	Transcriptional regulator
AGROH133_10463	COG1653	transport
AGROH133_10466	COG1175	transmembrane transport
AGROH133_10473	COG0395	ABC-type sugar transport system, permease component
AGROH133_10481	COG3842	ATPase activity
AGROH133_10483	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGROH133_10485	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_10492	COG1116	anion transmembrane transporter activity
AGROH133_10493	COG0395	ABC-type sugar transport system, permease component
AGROH133_10500	COG1175	transmembrane transport
AGROH133_10516	COG1609	Transcriptional regulator
AGROH133_10520	COG1082	Xylose isomerase domain protein TIM barrel
AGROH133_10521	COG3842	ATPase activity
AGROH133_10522	COG0395	ABC-type sugar transport system, permease component
AGROH133_10529	COG1175	transmembrane transport
AGROH133_10537	COG1653	transport
AGROH133_10539	COG1309	transcriptional regulator
AGROH133_10541	COG0673	inositol 2-dehydrogenase activity
AGROH133_10544	COG0673	inositol 2-dehydrogenase activity
AGROH133_10548	COG1278	Cold shock
AGROH133_10550	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AGROH133_10570	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AGROH133_10571	COG1136	(ABC) transporter
AGROH133_10571	COG0577	efflux transmembrane transporter activity
AGROH133_10576	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_10586	COG0745	RESPONSE REGULATOR receiver
AGROH133_10587	COG2205	protein histidine kinase activity
AGROH133_10591	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AGROH133_10597	COG0395	ABC-type sugar transport system, permease component
AGROH133_10604	COG1175	transmembrane transport
AGROH133_10629	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AGROH133_10631	COG3618	amidohydrolase
AGROH133_10632	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_10633	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_10634	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_10635	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
AGROH133_10636	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGROH133_10637	COG2186	Transcriptional regulator
AGROH133_10641	COG0667	Aldo Keto reductase
AGROH133_10662	COG2223	nitrite transmembrane transporter activity
AGROH133_10673	COG0583	DNA-binding transcription factor activity
AGROH133_10675	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AGROH133_10693	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AGROH133_10695	COG2084	Dehydrogenase
AGROH133_10698	COG1609	Transcriptional regulator
AGROH133_10700	COG1063	alcohol dehydrogenase
AGROH133_10701	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_10705	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_10706	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
AGROH133_10707	COG1175	transmembrane transport
AGROH133_10714	COG0395	ABC-type sugar transport system, permease component
AGROH133_10724	COG0395	ABC-type sugar transport system, permease component
AGROH133_10740	COG0626	cystathionine gamma-synthase activity
AGROH133_10742	COG0803	Belongs to the bacterial solute-binding protein 9 family
AGROH133_10754	COG1121	(ABC) transporter
AGROH133_10755	COG0523	cobalamin synthesis protein
AGROH133_10762	COG0523	cobalamin synthesis protein
AGROH133_10763	COG1653	transport
AGROH133_10765	COG1175	transmembrane transport
AGROH133_10773	COG0395	ABC-type sugar transport system, permease component
AGROH133_10780	COG3842	ATPase activity
AGROH133_10793	COG3047	cAMP biosynthetic process
AGROH133_10822	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AGROH133_10823	COG0456	acetyltransferase
AGROH133_10824	COG1073	alpha beta
AGROH133_10827	COG0017	Asparaginyl-tRNA synthetase
AGROH133_10839	COG0583	DNA-binding transcription factor activity
AGROH133_10841	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_10844	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_10854	COG1129	ABC transporter
AGROH133_10855	COG3447	MASE1 domain protein
AGROH133_10855	COG5001	Diguanylate cyclase
AGROH133_10855	COG5002	protein histidine kinase activity
AGROH133_10856	COG3257	ureidoglycine aminohydrolase activity
AGROH133_10858	COG5001	Diguanylate cyclase
AGROH133_10864	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AGROH133_10866	COG0747	negative chemotaxis
AGROH133_10868	COG0601	transmembrane transport
AGROH133_10876	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_10883	COG4172	Belongs to the ABC transporter superfamily
AGROH133_10884	COG4608	Belongs to the ABC transporter superfamily
AGROH133_10885	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AGROH133_10887	COG0129	dihydroxy-acid dehydratase activity
AGROH133_10888	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_10890	COG1129	ABC transporter
AGROH133_10891	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_10902	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_10912	COG2186	Transcriptional regulator
AGROH133_10927	COG0587	DNA-directed DNA polymerase activity
AGROH133_10928	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AGROH133_10938	COG0673	inositol 2-dehydrogenase activity
AGROH133_10940	COG3842	ATPase activity
AGROH133_10941	COG0395	ABC-type sugar transport system, permease component
AGROH133_10948	COG1175	transmembrane transport
AGROH133_10955	COG1653	transport
AGROH133_10958	COG1846	Transcriptional regulator
AGROH133_10958	COG1940	carbohydrate kinase activity
AGROH133_10960	COG0673	inositol 2-dehydrogenase activity
AGROH133_10964	COG5001	Diguanylate cyclase
AGROH133_10971	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AGROH133_10972	COG2894	cell division
AGROH133_10973	COG0850	regulation of cytokinetic process
AGROH133_10974	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AGROH133_10975	COG2186	Transcriptional regulator
AGROH133_10977	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AGROH133_10984	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AGROH133_10999	COG1063	alcohol dehydrogenase
AGROH133_11000	COG1312	Catalyzes the dehydration of D-mannonate
AGROH133_11006	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AGROH133_11008	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AGROH133_11026	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_11028	COG0640	Transcriptional regulator
AGROH133_11029	COG0625	glutathione transferase activity
AGROH133_11030	COG4172	Belongs to the ABC transporter superfamily
AGROH133_11031	COG1921	L-seryl-tRNASec selenium transferase activity
AGROH133_11035	COG3964	amidohydrolase
AGROH133_11043	COG0601	transmembrane transport
AGROH133_11051	COG0747	negative chemotaxis
AGROH133_11054	COG0438	transferase activity, transferring glycosyl groups
AGROH133_11080	COG4989	oxidoreductase activity
AGROH133_11084	COG3842	ATPase activity
AGROH133_11085	COG1653	transport
AGROH133_11087	COG1175	transmembrane transport
AGROH133_11094	COG0395	ABC-type sugar transport system, permease component
AGROH133_11101	COG1501	Belongs to the glycosyl hydrolase 31 family
AGROH133_11104	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_11111	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGROH133_11113	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AGROH133_11114	COG0352	thiamine-phosphate diphosphorylase activity
AGROH133_11115	COG0351	phosphomethylpyrimidine kinase
AGROH133_11116	COG1522	sequence-specific DNA binding
AGROH133_11117	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AGROH133_11118	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_11125	COG2204	response regulator
AGROH133_11126	COG4191	Histidine kinase
AGROH133_11128	COG1301	dicarboxylic acid transport
AGROH133_11145	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGROH133_11146	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_11158	COG1215	transferase activity, transferring glycosyl groups
AGROH133_11170	COG2942	2-epimerase
AGROH133_11185	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGROH133_11189	COG2197	response regulator
AGROH133_11204	COG3307	-O-antigen
AGROH133_11216	COG1596	polysaccharide export
AGROH133_11220	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AGROH133_11226	COG0840	transmembrane signaling receptor activity
AGROH133_11229	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_11232	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_11234	COG2094	Belongs to the DNA glycosylase MPG family
AGROH133_11237	COG1609	Transcriptional regulator
AGROH133_11239	COG1653	transport
AGROH133_11255	COG3842	ATPase activity
AGROH133_11257	COG0673	inositol 2-dehydrogenase activity
AGROH133_11258	COG0602	queuosine metabolic process
AGROH133_11259	COG0720	synthase
AGROH133_11260	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AGROH133_11266	COG0673	inositol 2-dehydrogenase activity
AGROH133_11269	COG0395	ABC-type sugar transport system, permease component
AGROH133_11298	COG0583	DNA-binding transcription factor activity
AGROH133_11300	COG0281	malic enzyme
AGROH133_11300	COG0280	phosphate acetyltransferase
AGROH133_11309	COG0765	amino acid transport
AGROH133_11315	COG1126	abc transporter atp-binding protein
AGROH133_11316	COG2079	MmgE PrpD family protein
AGROH133_11320	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_11326	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AGROH133_11344	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
AGROH133_11346	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AGROH133_11347	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_11356	COG1129	ABC transporter
AGROH133_11359	COG1473	amidohydrolase
AGROH133_11360	COG0747	negative chemotaxis
AGROH133_11372	COG0601	transmembrane transport
AGROH133_11380	COG0583	DNA-binding transcription factor activity
AGROH133_11382	COG1446	asparaginase
AGROH133_11385	COG0747	negative chemotaxis
AGROH133_11397	COG0601	transmembrane transport
AGROH133_11405	COG2197	response regulator
AGROH133_11407	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_11410	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
AGROH133_11418	COG1595	DNA-templated transcription, initiation
AGROH133_11420	COG1120	ATPase activity
AGROH133_11421	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_11435	COG2226	methyltransferase
AGROH133_11437	COG1120	ATPase activity
AGROH133_11438	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_11455	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AGROH133_11457	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_11458	COG0473	3-isopropylmalate dehydrogenase activity
AGROH133_11459	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_11460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_11471	COG0601	transmembrane transport
AGROH133_11479	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_11486	COG4172	Belongs to the ABC transporter superfamily
AGROH133_11487	COG1522	sequence-specific DNA binding
AGROH133_11496	COG1126	abc transporter atp-binding protein
AGROH133_11503	COG1473	amidohydrolase
AGROH133_11504	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_11505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_11506	COG1959	2 iron, 2 sulfur cluster binding
AGROH133_11508	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AGROH133_11509	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_11513	COG1960	acyl-CoA dehydrogenase activity
AGROH133_11515	COG0747	negative chemotaxis
AGROH133_11531	COG0444	Belongs to the ABC transporter superfamily
AGROH133_11533	COG0667	Aldo Keto reductase
AGROH133_11535	COG0583	DNA-binding transcription factor activity
AGROH133_11541	COG0747	negative chemotaxis
AGROH133_11544	COG1473	amidohydrolase
AGROH133_11545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_11550	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_11555	COG4608	Belongs to the ABC transporter superfamily
AGROH133_11556	COG0444	Belongs to the ABC transporter superfamily
AGROH133_11564	COG0601	transmembrane transport
AGROH133_11581	COG2186	Transcriptional regulator
AGROH133_11584	COG0300	oxidoreductase activity
AGROH133_11592	COG3453	Protein conserved in bacteria
AGROH133_11592	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGROH133_11593	COG0640	Transcriptional regulator
AGROH133_11600	COG2391	methyltransferase activity
AGROH133_11606	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AGROH133_11608	COG0022	dehydrogenase e1 component
AGROH133_11610	COG1960	acyl-CoA dehydrogenase activity
AGROH133_11611	COG0183	Belongs to the thiolase family
AGROH133_11613	COG1960	acyl-CoA dehydrogenase activity
AGROH133_11614	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AGROH133_11617	COG1024	Enoyl-CoA hydratase
AGROH133_11618	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AGROH133_11619	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AGROH133_11620	COG4952	isomerase
AGROH133_11621	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_11621	COG3347	Dehydrogenase
AGROH133_11622	COG1349	DNA-binding transcription factor activity
AGROH133_11624	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_11627	COG1129	ABC transporter
AGROH133_11628	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_11639	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_11648	COG3254	rhamnose metabolic process
AGROH133_11652	COG2264	protein methyltransferase activity
AGROH133_11653	COG5001	Diguanylate cyclase
AGROH133_11659	COG4335	DNA alkylation repair
AGROH133_11660	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AGROH133_11661	COG4208	sulfate ABC transporter
AGROH133_11677	COG4150	thiosulfate binding
AGROH133_11679	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AGROH133_11683	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AGROH133_11685	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AGROH133_11688	COG2226	methyltransferase
AGROH133_11693	COG0494	nUDIX hydrolase
AGROH133_11695	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AGROH133_11696	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AGROH133_11698	COG0653	protein targeting
AGROH133_11753	COG2244	polysaccharide biosynthetic process
AGROH133_11771	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AGROH133_11803	COG0438	transferase activity, transferring glycosyl groups
AGROH133_11804	COG0438	transferase activity, transferring glycosyl groups
AGROH133_11819	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AGROH133_11820	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
AGROH133_11820	COG2273	Hydrolase Family 16
AGROH133_11823	COG3842	ATPase activity
AGROH133_11824	COG3833	ABC-type maltose transport systems, permease component
AGROH133_11853	COG1396	sequence-specific DNA binding
AGROH133_11856	COG1129	ABC transporter
AGROH133_11857	COG4214	carbohydrate transport
AGROH133_11869	COG4213	ABC transporter substrate-binding protein
AGROH133_11877	COG0625	glutathione transferase activity
AGROH133_11878	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AGROH133_11879	COG1396	sequence-specific DNA binding
AGROH133_11879	COG3800	Transcriptional regulator
AGROH133_11882	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AGROH133_11890	COG0300	oxidoreductase activity
AGROH133_11894	COG2096	Adenosyltransferase
AGROH133_11904	COG2086	electron transfer activity
AGROH133_11906	COG1250	3-hydroxyacyl-CoA dehydrogenase
AGROH133_11907	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AGROH133_11910	COG0165	Argininosuccinate lyase
AGROH133_11912	COG0019	diaminopimelate decarboxylase activity
AGROH133_11921	COG2884	Cell division ATP-binding protein ftsE
AGROH133_11932	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AGROH133_11936	COG0287	Prephenate dehydrogenase
AGROH133_11937	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AGROH133_11938	COG2226	methyltransferase
AGROH133_11939	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGROH133_11943	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AGROH133_11944	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AGROH133_11958	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AGROH133_11959	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AGROH133_11962	COG4974	Belongs to the 'phage' integrase family
AGROH133_11964	COG0825	malonyl-CoA metabolic process
AGROH133_11965	COG3034	peptidoglycan biosynthetic process
AGROH133_11966	COG0425	Belongs to the sulfur carrier protein TusA family
AGROH133_11967	COG0523	cobalamin synthesis protein
AGROH133_11968	COG1686	Belongs to the peptidase S11 family
AGROH133_11970	COG1473	amidohydrolase
AGROH133_11972	COG4953	penicillin-binding protein 1C
AGROH133_11975	COG2373	Large extracellular alpha-helical protein
AGROH133_11978	COG2835	tetraacyldisaccharide 4'-kinase activity
AGROH133_11980	COG3118	belongs to the thioredoxin family
AGROH133_11985	COG0482	sulfurtransferase activity
AGROH133_12001	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AGROH133_12005	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AGROH133_12006	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AGROH133_12010	COG0037	tRNA processing
AGROH133_12013	COG2885	chlorophyll binding
AGROH133_12014	COG0823	Involved in the tonB-independent uptake of proteins
AGROH133_12025	COG0824	Thioesterase
AGROH133_12027	COG0494	nUDIX hydrolase
AGROH133_12030	COG2255	four-way junction helicase activity
AGROH133_12031	COG0632	four-way junction helicase activity
AGROH133_12032	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AGROH133_12033	COG2972	Histidine kinase
AGROH133_12033	COG0840	transmembrane signaling receptor activity
AGROH133_12038	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_12039	COG0217	transcriptional regulatory protein
AGROH133_12043	COG1692	metallophosphoesterase
AGROH133_12045	COG1253	flavin adenine dinucleotide binding
AGROH133_12069	COG0126	phosphoglycerate kinase activity
AGROH133_12070	COG3588	fructose-bisphosphate aldolase
AGROH133_12089	COG0254	rRNA binding
AGROH133_12090	COG1132	(ABC) transporter
AGROH133_12103	COG0483	inositol monophosphate 1-phosphatase activity
AGROH133_12120	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AGROH133_12121	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AGROH133_12123	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AGROH133_12124	COG0457	Tetratricopeptide repeat
AGROH133_12125	COG3750	Belongs to the UPF0335 family
AGROH133_12130	COG0469	pyruvate kinase activity
AGROH133_12131	COG3108	Peptidase M15
AGROH133_12133	COG2204	response regulator
AGROH133_12135	COG1164	Oligoendopeptidase f
AGROH133_12136	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AGROH133_12137	COG3706	GGDEF domain
AGROH133_12138	COG5310	Homospermidine synthase
AGROH133_12141	COG0737	Belongs to the 5'-nucleotidase family
AGROH133_12143	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AGROH133_12144	COG0330	HflC and HflK could
AGROH133_12156	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AGROH133_12157	COG2951	lytic endotransglycosylase activity
AGROH133_12164	COG2205	protein histidine kinase activity
AGROH133_12173	COG0070	glutamate synthase
AGROH133_12173	COG0069	glutamate synthase activity
AGROH133_12173	COG0067	glutamate synthase
AGROH133_12176	COG2205	protein histidine kinase activity
AGROH133_12180	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AGROH133_12183	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AGROH133_12191	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AGROH133_12209	COG0252	asparaginase activity
AGROH133_12223	COG1027	Aspartate ammonia-lyase
AGROH133_12224	COG2186	Transcriptional regulator
AGROH133_12246	COG3239	Fatty acid desaturase
AGROH133_12255	COG0583	DNA-binding transcription factor activity
AGROH133_12266	COG3842	ATPase activity
AGROH133_12267	COG1177	transmembrane transport
AGROH133_12275	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_12286	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_12287	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_12289	COG2267	carboxylic ester hydrolase activity
AGROH133_12292	COG1126	abc transporter atp-binding protein
AGROH133_12302	COG0174	glutamine synthetase
AGROH133_12303	COG0069	glutamate synthase activity
AGROH133_12304	COG2218	PFAM glutamate synthase alpha subunit domain protein
AGROH133_12305	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AGROH133_12310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_12319	COG0601	transmembrane transport
AGROH133_12328	COG0747	negative chemotaxis
AGROH133_12332	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AGROH133_12333	COG1454	alcohol dehydrogenase
AGROH133_12334	COG2186	Transcriptional regulator
AGROH133_12339	COG1607	acyl-coa hydrolase
AGROH133_12342	COG1116	anion transmembrane transporter activity
AGROH133_12350	COG2308	Evidence 4 Homologs of previously reported genes of
AGROH133_12350	COG2307	Protein conserved in bacteria
AGROH133_12354	COG0488	(ABC) transporter
AGROH133_12355	COG1304	FMN binding
AGROH133_12356	COG1846	Transcriptional regulator
AGROH133_12358	COG0840	transmembrane signaling receptor activity
AGROH133_12362	COG1070	Carbohydrate kinase
AGROH133_12363	COG1830	Aldolase
AGROH133_12364	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AGROH133_12365	COG0667	Aldo Keto reductase
AGROH133_12369	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_12379	COG1129	ABC transporter
AGROH133_12388	COG0071	Belongs to the small heat shock protein (HSP20) family
AGROH133_12401	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AGROH133_12408	COG0395	ABC-type sugar transport system, permease component
AGROH133_12422	COG3842	ATPase activity
AGROH133_12423	COG3842	ATPase activity
AGROH133_12427	COG1648	precorrin-2 dehydrogenase activity
AGROH133_12427	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AGROH133_12428	COG0243	molybdopterin cofactor binding
AGROH133_12430	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AGROH133_12431	COG1116	anion transmembrane transporter activity
AGROH133_12432	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_12438	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGROH133_12441	COG3707	response regulator
AGROH133_12442	COG1802	Transcriptional regulator
AGROH133_12444	COG1914	H( )-stimulated, divalent metal cation uptake system
AGROH133_12457	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AGROH133_12458	COG4336	lyase activity
AGROH133_12459	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AGROH133_12460	COG4770	biotin carboxylase activity
AGROH133_12462	COG0789	Transcriptional regulator
AGROH133_12464	COG4771	TonB-dependent receptor
AGROH133_12466	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AGROH133_12481	COG1414	Transcriptional regulator
AGROH133_12482	COG1475	DNA binding
AGROH133_12483	COG1192	Involved in chromosome partitioning
AGROH133_12490	COG0596	Alpha beta hydrolase
AGROH133_12493	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AGROH133_12495	COG2986	histidine ammonia-lyase
AGROH133_12496	COG1228	amidohydrolase
AGROH133_12497	COG0402	S-adenosylhomocysteine deaminase activity
AGROH133_12506	COG0511	ligase activity, forming carbon-carbon bonds
AGROH133_12507	COG0439	Biotin carboxylase
AGROH133_12510	COG1984	allophanate hydrolase subunit 2
AGROH133_12511	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AGROH133_12515	COG4221	oxidoreductase activity
AGROH133_12516	COG0765	amino acid transport
AGROH133_12521	COG0765	amino acid transport
AGROH133_12527	COG1126	abc transporter atp-binding protein
AGROH133_12528	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_12530	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AGROH133_12532	COG1126	abc transporter atp-binding protein
AGROH133_12538	COG0765	amino acid transport
AGROH133_12545	COG0640	Transcriptional regulator
AGROH133_12559	COG0431	NADPH-dependent FMN reductase
AGROH133_12561	COG0798	PFAM Bile acid sodium symporter
AGROH133_12574	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AGROH133_12575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGROH133_12577	COG3842	ATPase activity
AGROH133_12578	COG0395	ABC-type sugar transport system, permease component
AGROH133_12585	COG1175	transmembrane transport
AGROH133_12595	COG0673	inositol 2-dehydrogenase activity
AGROH133_12596	COG0673	inositol 2-dehydrogenase activity
AGROH133_12603	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGROH133_12604	COG0583	DNA-binding transcription factor activity
AGROH133_12606	COG0477	Major facilitator Superfamily
AGROH133_12623	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_12625	COG4172	Belongs to the ABC transporter superfamily
AGROH133_12626	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_12627	COG0601	transmembrane transport
AGROH133_12634	COG0747	negative chemotaxis
AGROH133_12637	COG0277	FAD linked oxidase domain protein
AGROH133_12643	COG2205	protein histidine kinase activity
AGROH133_12647	COG0745	RESPONSE REGULATOR receiver
AGROH133_12648	COG0671	phosphoesterase, PA-phosphatase related
AGROH133_12673	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AGROH133_12674	COG0156	8-amino-7-oxononanoate synthase activity
AGROH133_12675	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AGROH133_12676	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGROH133_12677	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AGROH133_12682	COG2423	ornithine cyclodeaminase activity
AGROH133_12683	COG0697	spore germination
AGROH133_12695	COG0673	inositol 2-dehydrogenase activity
AGROH133_12700	COG0477	Major facilitator Superfamily
AGROH133_12712	COG0642	Histidine kinase
AGROH133_12716	COG0745	RESPONSE REGULATOR receiver
AGROH133_12717	COG2194	sulfuric ester hydrolase activity
AGROH133_12724	COG0583	DNA-binding transcription factor activity
AGROH133_12726	COG4774	siderophore transport
AGROH133_12751	COG1120	ATPase activity
AGROH133_12757	COG2137	regulation of response to DNA damage stimulus
AGROH133_12758	COG3386	PFAM SMP-30 Gluconolaconase
AGROH133_12770	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_12781	COG1129	ABC transporter
AGROH133_12782	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_12784	COG4585	Histidine kinase
AGROH133_12785	COG2197	response regulator
AGROH133_12788	COG2133	pyrroloquinoline quinone binding
AGROH133_12792	COG0500	methyltransferase
AGROH133_12793	COG0564	pseudouridine synthase activity
AGROH133_12797	COG4175	Glycine betaine
AGROH133_12797	COG0517	IMP dehydrogenase activity
AGROH133_12798	COG4176	ABC-type proline glycine betaine transport system permease component
AGROH133_12807	COG0784	Response regulator, receiver
AGROH133_12807	COG4191	Histidine kinase
AGROH133_12809	COG0489	protein tyrosine kinase activity
AGROH133_12809	COG3206	protein involved in exopolysaccharide biosynthesis
AGROH133_12811	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AGROH133_12812	COG1215	transferase activity, transferring glycosyl groups
AGROH133_12813	COG1215	transferase activity, transferring glycosyl groups
AGROH133_12814	COG1215	transferase activity, transferring glycosyl groups
AGROH133_12818	COG0438	transferase activity, transferring glycosyl groups
AGROH133_12819	COG2273	Hydrolase Family 16
AGROH133_12821	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AGROH133_12831	COG2244	polysaccharide biosynthetic process
AGROH133_12846	COG0463	Glycosyl transferase, family 2
AGROH133_12847	COG2327	Polysaccharide pyruvyl transferase
AGROH133_12849	COG1215	transferase activity, transferring glycosyl groups
AGROH133_12855	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AGROH133_12856	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_12859	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AGROH133_12859	COG0446	pyridine nucleotide-disulphide oxidoreductase
AGROH133_12864	COG1523	belongs to the glycosyl hydrolase 13 family
AGROH133_12865	COG0033	Phosphoglucomutase
AGROH133_12866	COG0297	glycogen (starch) synthase activity
AGROH133_12867	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AGROH133_12868	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AGROH133_12869	COG0058	SHG alpha-glucan phosphorylase activity
AGROH133_12872	COG1794	racemase activity, acting on amino acids and derivatives
AGROH133_12873	COG1522	sequence-specific DNA binding
AGROH133_12876	COG2084	Dehydrogenase
AGROH133_12877	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_12878	COG1063	alcohol dehydrogenase
AGROH133_12880	COG4988	ABC transporter
AGROH133_12886	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AGROH133_12904	COG1294	oxidase, subunit
AGROH133_12922	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AGROH133_12924	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AGROH133_12931	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AGROH133_12932	COG0539	negative regulation of cytoplasmic translation
AGROH133_12938	COG4221	oxidoreductase activity
AGROH133_12940	COG0006	proline dipeptidase activity
AGROH133_12941	COG0747	negative chemotaxis
AGROH133_12943	COG0601	transmembrane transport
AGROH133_12946	COG0601	transmembrane transport
AGROH133_12952	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_12957	COG0444	Belongs to the ABC transporter superfamily
AGROH133_12958	COG4608	Belongs to the ABC transporter superfamily
AGROH133_12961	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_12967	COG0410	ABC transporter
AGROH133_12968	COG0559	Belongs to the binding-protein-dependent transport system permease family
AGROH133_12988	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AGROH133_12989	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_12995	COG4993	Dehydrogenase
AGROH133_13001	COG3685	Protein conserved in bacteria
AGROH133_13003	COG0693	protein deglycase activity
AGROH133_13008	COG0189	ligase activity
AGROH133_13009	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AGROH133_13010	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AGROH133_13021	COG0435	Glutathione S-transferase
AGROH133_13022	COG0583	DNA-binding transcription factor activity
AGROH133_13024	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_13026	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AGROH133_13028	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AGROH133_13035	COG1116	anion transmembrane transporter activity
AGROH133_13037	COG1522	sequence-specific DNA binding
AGROH133_13040	COG0784	Response regulator, receiver
AGROH133_13050	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AGROH133_13055	COG0019	diaminopimelate decarboxylase activity
AGROH133_13058	COG0527	aspartate kinase activity
AGROH133_13060	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AGROH133_13061	COG2890	protein-(glutamine-N5) methyltransferase activity
AGROH133_13063	COG0542	response to heat
AGROH133_13065	COG0741	lytic transglycosylase activity
AGROH133_13065	COG1196	nuclear chromosome segregation
AGROH133_13065	COG0739	heme binding
AGROH133_13075	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AGROH133_13076	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AGROH133_13082	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AGROH133_13096	COG1309	transcriptional regulator
AGROH133_13097	COG4221	oxidoreductase activity
AGROH133_13098	COG1902	pentaerythritol trinitrate reductase activity
AGROH133_13099	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_13100	COG0604	alcohol dehydrogenase
AGROH133_13102	COG0243	molybdopterin cofactor binding
AGROH133_13103	COG2814	Major facilitator Superfamily
AGROH133_13117	COG0492	ferredoxin-NADP+ reductase activity
AGROH133_13120	COG4566	intracellular signal transduction
AGROH133_13126	COG2140	Oxalate decarboxylase
AGROH133_13127	COG0783	Belongs to the Dps family
AGROH133_13131	COG0583	DNA-binding transcription factor activity
AGROH133_13134	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_13135	COG1846	Transcriptional regulator
AGROH133_13141	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AGROH133_13142	COG0583	DNA-binding transcription factor activity
AGROH133_13144	COG0346	lactoylglutathione lyase activity
AGROH133_13152	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AGROH133_13173	COG2080	2 iron, 2 sulfur cluster binding
AGROH133_13175	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AGROH133_13176	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AGROH133_13177	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AGROH133_13178	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AGROH133_13182	COG1278	Cold shock
AGROH133_13201	COG2986	histidine ammonia-lyase
AGROH133_13210	COG4172	Belongs to the ABC transporter superfamily
AGROH133_13211	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_13217	COG0601	transmembrane transport
AGROH133_13225	COG4166	transmembrane transport
AGROH133_13227	COG0840	transmembrane signaling receptor activity
AGROH133_13235	COG0583	DNA-binding transcription factor activity
AGROH133_13237	COG1473	amidohydrolase
AGROH133_13252	COG2186	Transcriptional regulator
AGROH133_13255	COG1175	transmembrane transport
AGROH133_13262	COG0395	ABC-type sugar transport system, permease component
AGROH133_13269	COG3842	ATPase activity
AGROH133_13280	COG2171	N-acyltransferase activity
AGROH133_13281	COG3300	MHYT domain
AGROH133_13281	COG5001	Diguanylate cyclase
AGROH133_13294	COG1609	Transcriptional regulator
AGROH133_13300	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_13311	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AGROH133_13316	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
AGROH133_13318	COG1049	propionate catabolic process, 2-methylcitrate cycle
AGROH133_13320	COG0367	asparagine synthase
AGROH133_13322	COG0318	PFAM AMP-dependent synthetase and ligase
AGROH133_13323	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AGROH133_13328	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AGROH133_13328	COG0446	pyridine nucleotide-disulphide oxidoreductase
AGROH133_13329	COG4311	Sarcosine oxidase, delta subunit
AGROH133_13330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_13331	COG4977	sequence-specific DNA binding
AGROH133_13333	COG1129	ABC transporter
AGROH133_13334	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_13345	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_13359	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_13361	COG0246	Mannitol dehydrogenase
AGROH133_13362	COG1312	Catalyzes the dehydration of D-mannonate
AGROH133_13377	COG1309	transcriptional regulator
AGROH133_13378	COG1063	alcohol dehydrogenase
AGROH133_13381	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_13384	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_13410	COG0483	inositol monophosphate 1-phosphatase activity
AGROH133_13424	COG1178	ABC-type Fe3 transport system permease component
AGROH133_13437	COG3842	ATPase activity
AGROH133_13449	COG1253	flavin adenine dinucleotide binding
AGROH133_13460	COG3842	ATPase activity
AGROH133_13461	COG0395	ABC-type sugar transport system, permease component
AGROH133_13468	COG1175	transmembrane transport
AGROH133_13475	COG1653	transport
AGROH133_13478	COG0673	inositol 2-dehydrogenase activity
AGROH133_13479	COG1609	Transcriptional regulator
AGROH133_13484	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AGROH133_13486	COG0446	pyridine nucleotide-disulphide oxidoreductase
AGROH133_13486	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AGROH133_13488	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AGROH133_13490	COG0668	transmembrane transport
AGROH133_13521	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_13522	COG3433	isochorismatase activity
AGROH133_13522	COG1535	isochorismatase
AGROH133_13523	COG1021	2,3-dihydroxybenzoate-AMP ligase
AGROH133_13524	COG1169	isochorismate synthase
AGROH133_13526	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AGROH133_13526	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AGROH133_13527	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AGROH133_13529	COG2375	cellular response to nickel ion
AGROH133_13532	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_13541	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_13552	COG1120	ATPase activity
AGROH133_13556	COG1629	transport
AGROH133_13556	COG4774	siderophore transport
AGROH133_13558	COG1960	acyl-CoA dehydrogenase activity
AGROH133_13559	COG0583	DNA-binding transcription factor activity
AGROH133_13562	COG1609	Transcriptional regulator
AGROH133_13567	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_13585	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AGROH133_13599	COG1473	amidohydrolase
AGROH133_13602	COG0747	negative chemotaxis
AGROH133_13604	COG0601	transmembrane transport
AGROH133_13620	COG0444	Belongs to the ABC transporter superfamily
AGROH133_13621	COG4608	Belongs to the ABC transporter superfamily
AGROH133_13622	COG0583	DNA-binding transcription factor activity
AGROH133_13624	COG0747	negative chemotaxis
AGROH133_13634	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_13635	COG0154	amidase activity
AGROH133_13636	COG0693	protein deglycase activity
AGROH133_13638	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_13645	COG0601	transmembrane transport
AGROH133_13655	COG1473	amidohydrolase
AGROH133_13656	COG4172	Belongs to the ABC transporter superfamily
AGROH133_13657	COG2390	Transcriptional regulator
AGROH133_13661	COG1175	transmembrane transport
AGROH133_13668	COG0395	ABC-type sugar transport system, permease component
AGROH133_13691	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AGROH133_13695	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AGROH133_13696	COG1414	Transcriptional regulator
AGROH133_13698	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_13699	COG5487	UPF0391 membrane protein
AGROH133_13703	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AGROH133_13712	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AGROH133_13721	COG1121	(ABC) transporter
AGROH133_13722	COG0803	Belongs to the bacterial solute-binding protein 9 family
AGROH133_13727	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AGROH133_13728	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AGROH133_13729	COG0471	metal ion transport
AGROH133_13729	COG3273	potassium ion transport
AGROH133_13740	COG1253	flavin adenine dinucleotide binding
AGROH133_13748	COG1309	transcriptional regulator
AGROH133_13766	COG1609	Transcriptional regulator
AGROH133_13768	COG1070	Carbohydrate kinase
AGROH133_13769	COG2115	Belongs to the xylose isomerase family
AGROH133_13772	COG0778	Nitroreductase
AGROH133_13773	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AGROH133_13774	COG2011	ABC-type metal ion transport system permease component
AGROH133_13782	COG3300	MHYT domain
AGROH133_13782	COG5001	Diguanylate cyclase
AGROH133_13789	COG0800	Aldolase
AGROH133_13795	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AGROH133_13830	COG0523	cobalamin synthesis protein
AGROH133_13833	COG1846	Transcriptional regulator
AGROH133_13835	COG1609	Transcriptional regulator
AGROH133_13838	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AGROH133_13839	COG0673	inositol 2-dehydrogenase activity
AGROH133_13840	COG3718	enzyme involved in inositol metabolism
AGROH133_13842	COG3962	Belongs to the TPP enzyme family
AGROH133_13843	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AGROH133_13846	COG3842	ATPase activity
AGROH133_13866	COG0683	leucine binding
AGROH133_13871	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_13886	COG0747	negative chemotaxis
AGROH133_13893	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AGROH133_13894	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AGROH133_13895	COG1126	abc transporter atp-binding protein
AGROH133_13896	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_13899	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AGROH133_13902	COG0765	amino acid transport
AGROH133_13908	COG0765	amino acid transport
AGROH133_13915	COG3485	protocatechuate 3,4-dioxygenase
AGROH133_13916	COG3485	protocatechuate 3,4-dioxygenase
AGROH133_13917	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AGROH133_13919	COG0583	DNA-binding transcription factor activity
AGROH133_13924	COG1414	Transcriptional regulator
AGROH133_13927	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AGROH133_13928	COG0183	Belongs to the thiolase family
AGROH133_13929	COG1609	Transcriptional regulator
AGROH133_13934	COG1082	Xylose isomerase domain protein TIM barrel
AGROH133_13935	COG0673	inositol 2-dehydrogenase activity
AGROH133_13937	COG1609	Transcriptional regulator
AGROH133_13939	COG0395	ABC-type sugar transport system, permease component
AGROH133_13946	COG1175	transmembrane transport
AGROH133_13953	COG3842	ATPase activity
AGROH133_13955	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AGROH133_13964	COG3842	ATPase activity
AGROH133_13965	COG4149	molybdate abc transporter
AGROH133_13979	COG0584	glycerophosphoryl diester phosphodiesterase
AGROH133_13980	COG0483	inositol monophosphate 1-phosphatase activity
AGROH133_13987	COG3842	ATPase activity
AGROH133_14015	COG3210	domain, Protein
AGROH133_14015	COG3210	domain, Protein
AGROH133_14018	COG2963	transposase activity
AGROH133_14019	COG2801	Transposase and inactivated derivatives
AGROH133_14021	COG3547	Transposase (IS116 IS110 IS902 family)
AGROH133_14023	COG3547	Transposase (IS116 IS110 IS902 family)
AGROH133_14027	COG4372	Transposase
AGROH133_14051	COG0753	catalase activity
AGROH133_14052	COG3685	Protein conserved in bacteria
AGROH133_14064	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AGROH133_14065	COG0297	glycogen (starch) synthase activity
AGROH133_14080	COG4106	trans-aconitate 2-methyltransferase activity
AGROH133_14097	COG0583	DNA-binding transcription factor activity
AGROH133_14099	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14105	COG0406	alpha-ribazole phosphatase activity
AGROH133_14112	COG3550	peptidyl-serine autophosphorylation
AGROH133_14125	COG1192	Involved in chromosome partitioning
AGROH133_14126	COG1475	DNA binding
AGROH133_14127	COG0640	Transcriptional regulator
AGROH133_14128	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AGROH133_14130	COG0583	DNA-binding transcription factor activity
AGROH133_14132	COG0583	DNA-binding transcription factor activity
AGROH133_14137	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14141	COG0583	DNA-binding transcription factor activity
AGROH133_14146	COG0300	oxidoreductase activity
AGROH133_14148	COG3177	Filamentation induced by cAMP protein fic
AGROH133_14154	COG3971	2-oxopent-4-enoate hydratase activity
AGROH133_14155	COG3485	protocatechuate 3,4-dioxygenase
AGROH133_14170	COG1431	PFAM Stem cell self-renewal protein Piwi
AGROH133_14194	COG0583	DNA-binding transcription factor activity
AGROH133_14205	COG4221	oxidoreductase activity
AGROH133_14210	COG0300	oxidoreductase activity
AGROH133_14211	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14217	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14222	COG3959	Transketolase, thiamine diphosphate binding domain
AGROH133_14223	COG3958	Transketolase
AGROH133_14224	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AGROH133_14230	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_14237	COG0395	ABC-type sugar transport system, permease component
AGROH133_14245	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14246	COG1802	Transcriptional regulator
AGROH133_14247	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGROH133_14249	COG3842	ATPase activity
AGROH133_14253	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AGROH133_14254	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14256	COG0583	DNA-binding transcription factor activity
AGROH133_14262	COG2207	Transcriptional regulator
AGROH133_14266	COG1741	Belongs to the pirin family
AGROH133_14267	COG0583	DNA-binding transcription factor activity
AGROH133_14271	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AGROH133_14272	COG1522	sequence-specific DNA binding
AGROH133_14274	COG0747	negative chemotaxis
AGROH133_14276	COG0601	transmembrane transport
AGROH133_14292	COG4172	Belongs to the ABC transporter superfamily
AGROH133_14295	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AGROH133_14302	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AGROH133_14306	COG1733	regulation of RNA biosynthetic process
AGROH133_14307	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14311	COG0583	DNA-binding transcription factor activity
AGROH133_14314	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14315	COG0667	Aldo Keto reductase
AGROH133_14319	COG0583	DNA-binding transcription factor activity
AGROH133_14321	COG4644	lycopene metabolic process
AGROH133_14322	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AGROH133_14335	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AGROH133_14338	COG4566	intracellular signal transduction
AGROH133_14339	COG4191	Histidine kinase
AGROH133_14346	COG3588	fructose-bisphosphate aldolase
AGROH133_14358	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14359	COG1733	regulation of RNA biosynthetic process
AGROH133_14360	COG1309	transcriptional regulator
AGROH133_14361	COG0477	Major facilitator Superfamily
AGROH133_14377	COG1794	racemase activity, acting on amino acids and derivatives
AGROH133_14380	COG0300	oxidoreductase activity
AGROH133_14387	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
AGROH133_14392	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AGROH133_14403	COG0287	Prephenate dehydrogenase
AGROH133_14403	COG1605	Chorismate mutase
AGROH133_14404	COG0583	DNA-binding transcription factor activity
AGROH133_14406	COG0300	oxidoreductase activity
AGROH133_14409	COG1376	ErfK ybiS ycfS ynhG family protein
AGROH133_14415	COG0251	oxidation-reduction process
AGROH133_14418	COG0656	L-ascorbic acid biosynthetic process
AGROH133_14423	COG0583	DNA-binding transcription factor activity
AGROH133_14427	COG3177	Filamentation induced by cAMP protein fic
AGROH133_14430	COG0583	DNA-binding transcription factor activity
AGROH133_14432	COG0300	oxidoreductase activity
AGROH133_14438	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14447	COG0655	NAD(P)H dehydrogenase (quinone) activity
AGROH133_14452	COG4221	oxidoreductase activity
AGROH133_14456	COG0655	NAD(P)H dehydrogenase (quinone) activity
AGROH133_14469	COG0492	ferredoxin-NADP+ reductase activity
AGROH133_14471	COG0753	catalase activity
AGROH133_14472	COG3685	Protein conserved in bacteria
AGROH133_14473	COG3685	Protein conserved in bacteria
AGROH133_14476	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AGROH133_14496	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14512	COG0459	protein refolding
AGROH133_14513	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AGROH133_14514	COG5425	PFAM Usg family protein
AGROH133_14516	COG0071	Belongs to the small heat shock protein (HSP20) family
AGROH133_14520	COG0745	RESPONSE REGULATOR receiver
AGROH133_14521	COG3920	Histidine kinase
AGROH133_14521	COG2202	Pas domain
AGROH133_14526	COG0784	Response regulator, receiver
AGROH133_14526	COG4191	Histidine kinase
AGROH133_14534	COG1473	amidohydrolase
AGROH133_14535	COG0456	acetyltransferase
AGROH133_14535	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AGROH133_14536	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AGROH133_14539	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14540	COG1609	Transcriptional regulator
AGROH133_14542	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_14543	COG2814	Major facilitator Superfamily
AGROH133_14555	COG3177	Filamentation induced by cAMP protein fic
AGROH133_14556	COG3609	addiction module antidote protein, CC2985 family
AGROH133_14571	COG2207	Transcriptional regulator
AGROH133_14592	COG3706	GGDEF domain
AGROH133_14600	COG3706	GGDEF domain
AGROH133_14600	COG2203	Gaf domain
AGROH133_14600	COG5001	Diguanylate cyclase
AGROH133_14600	COG4251	negative regulation of phosphorylation
AGROH133_14608	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AGROH133_14613	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AGROH133_14615	COG2144	transferase activity, transferring acyl groups
AGROH133_14617	COG2072	flavoprotein involved in K transport
AGROH133_14619	COG0840	transmembrane signaling receptor activity
AGROH133_14622	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14628	COG0587	DNA-directed DNA polymerase activity
AGROH133_14636	COG4227	nucleotidyltransferase activity
AGROH133_14637	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AGROH133_14637	COG0456	acetyltransferase
AGROH133_14639	COG5489	Protein of unknown function (DUF736)
AGROH133_14641	COG4974	Belongs to the 'phage' integrase family
AGROH133_14652	COG0776	regulation of translation
AGROH133_14653	COG3831	ATPase activity
AGROH133_14658	COG3505	Type IV secretory pathway VirD4
AGROH133_14670	COG4974	Belongs to the 'phage' integrase family
AGROH133_14683	COG2945	thiolester hydrolase activity
AGROH133_14685	COG4974	Belongs to the 'phage' integrase family
AGROH133_14693	COG0156	8-amino-7-oxononanoate synthase activity
AGROH133_14695	COG0745	RESPONSE REGULATOR receiver
AGROH133_14697	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14698	COG0028	Belongs to the TPP enzyme family
AGROH133_14699	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AGROH133_14701	COG3842	ATPase activity
AGROH133_14702	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_14710	COG1177	transmembrane transport
AGROH133_14717	COG1840	ABC-type Fe3 transport system, periplasmic component
AGROH133_14737	COG1414	Transcriptional regulator
AGROH133_14739	COG1454	alcohol dehydrogenase
AGROH133_14740	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AGROH133_14742	COG4221	oxidoreductase activity
AGROH133_14743	COG2186	Transcriptional regulator
AGROH133_14753	COG3842	ATPase activity
AGROH133_14756	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_14763	COG1177	transmembrane transport
AGROH133_14771	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AGROH133_14787	COG3838	Conjugal transfer protein Trbc
AGROH133_14792	COG3702	type iv secretory pathway
AGROH133_14794	COG3451	type IV secretory pathway VirB4
AGROH133_14798	COG3704	protein secretion by the type IV secretion system
AGROH133_14805	COG3736	Type IV secretory pathway, component VirB8
AGROH133_14807	COG3504	Conjugal transfer protein
AGROH133_14809	COG2948	multi-organism process
AGROH133_14811	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
AGROH133_14815	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AGROH133_14817	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AGROH133_14826	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AGROH133_14832	COG4191	Histidine kinase
AGROH133_14832	COG0784	Response regulator, receiver
AGROH133_14837	COG4691	Plasmid stability protein
AGROH133_14838	COG1487	ribonuclease activity
AGROH133_14839	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_14841	COG2186	Transcriptional regulator
AGROH133_14845	COG0747	negative chemotaxis
AGROH133_14848	COG0601	transmembrane transport
AGROH133_14855	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AGROH133_14862	COG4172	Belongs to the ABC transporter superfamily
AGROH133_14863	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_14871	COG1176	ABC-type spermidine putrescine transport system, permease component I
AGROH133_14885	COG3842	ATPase activity
AGROH133_14886	COG0483	inositol monophosphate 1-phosphatase activity
AGROH133_14887	COG0628	permease
AGROH133_14898	COG3734	2-keto-3-deoxy-galactonokinase
AGROH133_14899	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AGROH133_14900	COG4948	Mandelate Racemase Muconate Lactonizing
AGROH133_14903	COG1175	transmembrane transport
AGROH133_14910	COG0395	ABC-type sugar transport system, permease component
AGROH133_14918	COG3842	ATPase activity
AGROH133_14920	COG1414	Transcriptional regulator
AGROH133_14922	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_14923	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AGROH133_14924	COG2207	Transcriptional regulator
AGROH133_14929	COG0583	DNA-binding transcription factor activity
AGROH133_14931	COG0667	Aldo Keto reductase
AGROH133_14937	COG0300	oxidoreductase activity
AGROH133_14943	COG1566	PFAM secretion protein HlyD family protein
AGROH133_14945	COG1136	(ABC) transporter
AGROH133_14959	COG2076	Multidrug Resistance protein
AGROH133_14964	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AGROH133_14968	COG0745	RESPONSE REGULATOR receiver
AGROH133_14969	COG2205	protein histidine kinase activity
AGROH133_14975	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_14976	COG1136	(ABC) transporter
AGROH133_14976	COG0577	efflux transmembrane transporter activity
AGROH133_14981	COG0454	-acetyltransferase
AGROH133_15003	COG0745	RESPONSE REGULATOR receiver
AGROH133_15007	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AGROH133_15023	COG1120	ATPase activity
AGROH133_15024	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AGROH133_15036	COG1609	Transcriptional regulator
AGROH133_15038	COG1082	Xylose isomerase domain protein TIM barrel
AGROH133_15039	COG0673	inositol 2-dehydrogenase activity
AGROH133_15040	COG1082	Xylose isomerase domain protein TIM barrel
AGROH133_15042	COG0405	Gamma-glutamyltransferase
AGROH133_15050	COG1215	transferase activity, transferring glycosyl groups
AGROH133_15062	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AGROH133_15066	COG2390	Transcriptional regulator
AGROH133_15068	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AGROH133_15069	COG3958	Transketolase
AGROH133_15070	COG3959	Transketolase, thiamine diphosphate binding domain
AGROH133_15071	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_15080	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_15082	COG1129	ABC transporter
AGROH133_15083	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_15084	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AGROH133_15087	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
AGROH133_15088	COG1741	Belongs to the pirin family
AGROH133_15089	COG1335	isochorismatase
AGROH133_15090	COG0583	DNA-binding transcription factor activity
AGROH133_15092	COG1733	regulation of RNA biosynthetic process
AGROH133_15093	COG3321	synthase
AGROH133_15093	COG1028	Short-chain dehydrogenase reductase Sdr
AGROH133_15093	COG0604	alcohol dehydrogenase
AGROH133_15094	COG0583	DNA-binding transcription factor activity
AGROH133_15099	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AGROH133_15099	COG1017	nitric oxide dioxygenase activity
AGROH133_15100	COG0625	glutathione transferase activity
AGROH133_15102	COG0583	DNA-binding transcription factor activity
AGROH133_15108	COG1349	DNA-binding transcription factor activity
AGROH133_15110	COG1879	ABC-type sugar transport system periplasmic component
AGROH133_15112	COG1129	ABC transporter
AGROH133_15113	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_15124	COG1172	Belongs to the binding-protein-dependent transport system permease family
AGROH133_15138	COG1012	belongs to the aldehyde dehydrogenase family
AGROH133_15140	COG1280	lysine exporter protein (LysE YggA)
AGROH133_15148	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AGROH133_15150	COG0411	ABC transporter
AGROH133_15192	COG0668	transmembrane transport
AGROH133_15208	COG1566	PFAM secretion protein HlyD family protein
AGROH133_15227	COG2207	Transcriptional regulator
AGROH133_15230	COG4302	ethanolamine ammonia-lyase activity
AGROH133_15231	COG4303	Ethanolamine ammonia lyase large subunit
AGROH133_15235	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AGROH133_15236	COG1349	DNA-binding transcription factor activity
AGROH133_15238	COG4608	Belongs to the ABC transporter superfamily
AGROH133_15246	COG0601	transmembrane transport
AGROH133_15254	COG0747	negative chemotaxis
AGROH133_15259	COG3842	ATPase activity
AGROH133_15260	COG1063	alcohol dehydrogenase
AGROH133_15261	COG0395	ABC-type sugar transport system, permease component
AGROH133_15269	COG1175	transmembrane transport
AGROH133_15298	COG0326	Molecular chaperone. Has ATPase activity
AGROH133_15300	COG1881	PFAM PEBP family protein
AGROH133_15306	COG2801	Transposase and inactivated derivatives
AGROH133_15317	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AGROH133_15331	COG0583	DNA-binding transcription factor activity
AGROH133_15335	COG0583	DNA-binding transcription factor activity
AGROH133_15336	COG0667	Aldo Keto reductase
AGROH133_15344	COG1278	Cold shock
AGROH133_15347	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AGROH133_15348	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AGROH133_15356	COG1538	Outer membrane efflux protein
AGROH133_15358	COG1280	lysine exporter protein (LysE YggA)
AGROH133_15367	COG1126	abc transporter atp-binding protein
AGROH133_15371	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain