locus-tag class description BSY240_1 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_100 PF00510 Cytochrome c oxidase subunit III BSY240_1000 PF00687 Ribosomal protein L1p/L10e family BSY240_1001 PF03946 Ribosomal protein L11, N-terminal domain BSY240_1001 PF00298 Ribosomal protein L11, RNA binding domain BSY240_1002 PF00467 KOW motif BSY240_1002 PF02357 Transcription termination factor nusG BSY240_1003 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BSY240_1008 PF00009 Elongation factor Tu GTP binding domain BSY240_1008 PF03143 Elongation factor Tu C-terminal domain BSY240_1008 PF03144 Elongation factor Tu domain 2 BSY240_1011 PF00588 SpoU rRNA Methylase family BSY240_1011 PF08032 RNA 2'-O ribose methyltransferase substrate binding BSY240_1016 PF01513 ATP-NAD kinase BSY240_1019 PF03462 PCRF domain BSY240_1019 PF00472 RF-1 domain BSY240_102 PF00034 Cytochrome c BSY240_1020 PF00905 Penicillin binding protein transpeptidase domain BSY240_1020 PF00912 Transglycosylase BSY240_1020 PF17092 Penicillin-binding protein OB-like domain BSY240_1021 PF01476 LysM domain BSY240_1021 PF01520 N-acetylmuramoyl-L-alanine amidase BSY240_1022 PF12111 Polyribonucleotide phosphorylase C terminal BSY240_1022 PF10150 Ribonuclease E/G family BSY240_1022 PF00575 S1 RNA binding domain BSY240_1024 PF00155 Aminotransferase class I and II BSY240_1026 PF01220 Dehydroquinase class II BSY240_1027 PF00364 Biotin-requiring enzyme BSY240_1028 PF00289 Biotin carboxylase, N-terminal domain BSY240_1028 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_1028 PF02785 Biotin carboxylase C-terminal domain BSY240_1029 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BSY240_103 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSY240_1030 PF13091 PLD-like domain BSY240_1030 PF13396 Phospholipase_D-nuclease N-terminal BSY240_1031 PF00384 Molybdopterin oxidoreductase BSY240_1036 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSY240_1038 PF08447 PAS fold BSY240_1038 PF13426 PAS domain BSY240_1038 PF07536 HWE histidine kinase BSY240_104 PF07728 AAA domain (dynein-related subfamily) BSY240_104 PF08406 CbbQ/NirQ/NorQ C-terminal BSY240_1045 PF02934 GatB/GatE catalytic domain BSY240_1045 PF02637 GatB domain BSY240_1046 PF00583 Acetyltransferase (GNAT) family BSY240_1048 PF09857 Putative toxin of bacterial toxin-antitoxin pair BSY240_105 PF00092 von Willebrand factor type A domain BSY240_1052 PF01425 Amidase BSY240_1053 PF02686 Glu-tRNAGln amidotransferase C subunit BSY240_1055 PF08274 PhnA Zinc-Ribbon BSY240_1055 PF03831 PhnA domain BSY240_1057 PF03652 Holliday junction resolvase BSY240_1058 PF02770 Acyl-CoA dehydrogenase, middle domain BSY240_1058 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSY240_1058 PF18158 Adaptive response protein AidB N-terminal domain BSY240_106 PF04055 Radical SAM superfamily BSY240_1060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BSY240_1060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BSY240_1061 PF01979 Amidohydrolase family BSY240_1062 PF02660 Glycerol-3-phosphate acyltransferase BSY240_1064 PF02481 DNA recombination-mediator protein A BSY240_1064 PF17782 DprA winged helix domain BSY240_1065 PF01396 Topoisomerase DNA binding C4 zinc finger BSY240_1065 PF13368 Topoisomerase C-terminal repeat BSY240_1065 PF01131 DNA topoisomerase BSY240_1065 PF01751 Toprim domain BSY240_1066 PF08461 Ribonuclease R winged-helix domain BSY240_1066 PF17876 Cold shock domain BSY240_1066 PF00773 RNB domain BSY240_1066 PF00575 S1 RNA binding domain BSY240_1066 PF08206 Ribonuclease B OB domain BSY240_1068 PF07690 Major Facilitator Superfamily BSY240_1069 PF00471 Ribosomal protein L33 BSY240_1070 PF00072 Response regulator receiver domain BSY240_1070 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1071 PF00072 Response regulator receiver domain BSY240_1074 PF00817 impB/mucB/samB family BSY240_1074 PF11799 impB/mucB/samB family C-terminal domain BSY240_1077 PF14579 Helix-hairpin-helix motif BSY240_1077 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BSY240_1077 PF07733 Bacterial DNA polymerase III alpha NTPase domain BSY240_1077 PF02811 PHP domain BSY240_1078 PF00005 ABC transporter BSY240_1079 PF02687 FtsX-like permease family BSY240_1079 PF12704 MacB-like periplasmic core domain BSY240_1080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSY240_1080 PF03129 Anticodon binding domain BSY240_1083 PF17770 Ribonuclease J C-terminal domain BSY240_1083 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BSY240_1083 PF12706 Beta-lactamase superfamily domain BSY240_1084 PF03099 Biotin/lipoate A/B protein ligase family BSY240_1084 PF03309 Type III pantothenate kinase BSY240_1084 PF02237 Biotin protein ligase C terminal domain BSY240_1085 PF00361 Proton-conducting membrane transporter BSY240_1086 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BSY240_1086 PF00361 Proton-conducting membrane transporter BSY240_1087 PF00361 Proton-conducting membrane transporter BSY240_1087 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSY240_1088 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSY240_1089 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BSY240_1090 PF12838 4Fe-4S dicluster domain BSY240_1091 PF00146 NADH dehydrogenase BSY240_1092 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSY240_1092 PF00384 Molybdopterin oxidoreductase BSY240_1092 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BSY240_1093 PF00829 Ribosomal prokaryotic L21 protein BSY240_1094 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BSY240_1094 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BSY240_1094 PF10531 SLBB domain BSY240_1097 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BSY240_1098 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BSY240_1099 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BSY240_110 PF07732 Multicopper oxidase BSY240_110 PF00394 Multicopper oxidase BSY240_1100 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BSY240_1106 PF00701 Dihydrodipicolinate synthetase family BSY240_1107 PF07729 FCD domain BSY240_1107 PF00392 Bacterial regulatory proteins, gntR family BSY240_1108 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BSY240_1108 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BSY240_1108 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BSY240_1111 PF00248 Aldo/keto reductase family BSY240_1113 PF00892 EamA-like transporter family BSY240_1114 PF00216 Bacterial DNA-binding protein BSY240_1115 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_1115 PF05362 Lon protease (S16) C-terminal proteolytic domain BSY240_1115 PF02190 ATP-dependent protease La (LON) substrate-binding domain BSY240_1116 PF06689 ClpX C4-type zinc finger BSY240_1116 PF10431 C-terminal, D2-small domain, of ClpB protein BSY240_1116 PF07724 AAA domain (Cdc48 subfamily) BSY240_1117 PF00574 Clp protease BSY240_1118 PF00563 EAL domain BSY240_1118 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1119 PF08279 HTH domain BSY240_1119 PF13280 WYL domain BSY240_112 PF13545 Crp-like helix-turn-helix domain BSY240_1120 PF00067 Cytochrome P450 BSY240_1122 PF13417 Glutathione S-transferase, N-terminal domain BSY240_1123 PF01053 Cys/Met metabolism PLP-dependent enzyme BSY240_1125 PF13380 CoA binding domain BSY240_1127 PF13380 CoA binding domain BSY240_1129 PF00572 Ribosomal protein L13 BSY240_113 PF00127 Copper binding proteins, plastocyanin/azurin family BSY240_1130 PF00380 Ribosomal protein S9/S16 BSY240_1131 PF00491 Arginase family BSY240_1132 PF01118 Semialdehyde dehydrogenase, NAD binding domain BSY240_1133 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BSY240_1134 PF02628 Cytochrome oxidase assembly protein BSY240_1137 PF02706 Chain length determinant protein BSY240_1139 PF00534 Glycosyl transferases group 1 BSY240_1139 PF13439 Glycosyltransferase Family 4 BSY240_114 PF03264 NapC/NirT cytochrome c family, N-terminal region BSY240_1140 PF02397 Bacterial sugar transferase BSY240_1147 PF13411 MerR HTH family regulatory protein BSY240_1148 PF00216 Bacterial DNA-binding protein BSY240_1149 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BSY240_1149 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BSY240_115 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BSY240_1150 PF02504 Fatty acid synthesis protein BSY240_1154 PF03030 Inorganic H+ pyrophosphatase BSY240_1155 PF07690 Major Facilitator Superfamily BSY240_1156 PF01029 NusB family BSY240_1157 PF00885 6,7-dimethyl-8-ribityllumazine synthase BSY240_1159 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BSY240_1159 PF01872 RibD C-terminal domain BSY240_116 PF01568 Molydopterin dinucleotide binding domain BSY240_116 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSY240_116 PF00384 Molybdopterin oxidoreductase BSY240_1160 PF03477 ATP cone domain BSY240_1161 PF00464 Serine hydroxymethyltransferase BSY240_1166 PF00490 Delta-aminolevulinic acid dehydratase BSY240_1168 PF04377 Arginine-tRNA-protein transferase, C terminus BSY240_1168 PF04376 Arginine-tRNA-protein transferase, N terminus BSY240_1170 PF00563 EAL domain BSY240_1170 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1170 PF13188 PAS domain BSY240_1170 PF03707 Bacterial signalling protein N terminal repeat BSY240_1172 PF00521 DNA gyrase/topoisomerase IV, subunit A BSY240_1172 PF03989 DNA gyrase C-terminal domain, beta-propeller BSY240_1174 PF02938 GAD domain BSY240_1174 PF01336 OB-fold nucleic acid binding domain BSY240_1174 PF00152 tRNA synthetases class II (D, K and N) BSY240_1176 PF01527 Transposase BSY240_1177 PF13276 HTH-like domain BSY240_1177 PF00665 Integrase core domain BSY240_1179 PF02909 Tetracyclin repressor-like, C-terminal domain BSY240_1179 PF00440 Bacterial regulatory proteins, tetR family BSY240_118 PF13545 Crp-like helix-turn-helix domain BSY240_118 PF00027 Cyclic nucleotide-binding domain BSY240_1183 PF00394 Multicopper oxidase BSY240_1183 PF07732 Multicopper oxidase BSY240_1183 PF07731 Multicopper oxidase BSY240_1185 PF00570 HRDC domain BSY240_1185 PF01612 3'-5' exonuclease BSY240_119 PF00072 Response regulator receiver domain BSY240_119 PF00196 Bacterial regulatory proteins, luxR family BSY240_1192 PF02541 Ppx/GppA phosphatase family BSY240_1193 PF02503 Polyphosphate kinase middle domain BSY240_1193 PF13090 Polyphosphate kinase C-terminal domain 2 BSY240_1193 PF17941 Polyphosphate kinase C-terminal domain 1 BSY240_1193 PF13089 Polyphosphate kinase N-terminal domain BSY240_1195 PF01594 AI-2E family transporter BSY240_1196 PF02769 AIR synthase related protein, C-terminal domain BSY240_1196 PF00586 AIR synthase related protein, N-terminal domain BSY240_1197 PF00551 Formyl transferase BSY240_1198 PF00293 NUDIX domain BSY240_1199 PF00005 ABC transporter BSY240_1199 PF00664 ABC transporter transmembrane region BSY240_120 PF00512 His Kinase A (phospho-acceptor) domain BSY240_120 PF00989 PAS fold BSY240_120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1200 PF01568 Molydopterin dinucleotide binding domain BSY240_1200 PF00384 Molybdopterin oxidoreductase BSY240_1200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSY240_1201 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BSY240_1202 PF00445 Ribonuclease T2 family BSY240_1204 PF13505 Outer membrane protein beta-barrel domain BSY240_1206 PF02151 UvrB/uvrC motif BSY240_1206 PF08459 UvrC Helix-hairpin-helix N-terminal BSY240_1206 PF12826 Helix-hairpin-helix motif BSY240_1206 PF01541 GIY-YIG catalytic domain BSY240_1207 PF01066 CDP-alcohol phosphatidyltransferase BSY240_1209 PF02391 MoaE protein BSY240_1210 PF00334 Nucleoside diphosphate kinase BSY240_1211 PF13417 Glutathione S-transferase, N-terminal domain BSY240_1213 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1213 PF00672 HAMP domain BSY240_1213 PF02203 Tar ligand binding domain homologue BSY240_1216 PF00005 ABC transporter BSY240_1216 PF12848 ABC transporter BSY240_1217 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1217 PF00672 HAMP domain BSY240_1219 PF02789 Cytosol aminopeptidase family, N-terminal domain BSY240_1219 PF00883 Cytosol aminopeptidase family, catalytic domain BSY240_122 PF01272 Transcription elongation factor, GreA/GreB, C-term BSY240_122 PF14760 Rnk N-terminus BSY240_1222 PF04453 LPS transport system D BSY240_1224 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BSY240_1225 PF00398 Ribosomal RNA adenine dimethylase BSY240_1226 PF00672 HAMP domain BSY240_1226 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_1227 PF03466 LysR substrate binding domain BSY240_1228 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BSY240_1229 PF00884 Sulfatase BSY240_1229 PF12411 Choline sulfatase enzyme C terminal BSY240_1230 PF00625 Guanylate kinase BSY240_1231 PF03755 YicC-like family, N-terminal region BSY240_1231 PF08340 Domain of unknown function (DUF1732) BSY240_1232 PF02618 YceG-like family BSY240_1233 PF02801 Beta-ketoacyl synthase, C-terminal domain BSY240_1233 PF00109 Beta-ketoacyl synthase, N-terminal domain BSY240_1234 PF00550 Phosphopantetheine attachment site BSY240_1236 PF00698 Acyl transferase domain BSY240_1237 PF00248 Aldo/keto reductase family BSY240_1238 PF01699 Sodium/calcium exchanger protein BSY240_1239 PF01250 Ribosomal protein S6 BSY240_124 PF00892 EamA-like transporter family BSY240_1240 PF01084 Ribosomal protein S18 BSY240_1242 PF01281 Ribosomal protein L9, N-terminal domain BSY240_1242 PF03948 Ribosomal protein L9, C-terminal domain BSY240_1243 PF00772 DnaB-like helicase N terminal domain BSY240_1243 PF03796 DnaB-like helicase C terminal domain BSY240_1246 PF12852 Cupin BSY240_1246 PF12833 Helix-turn-helix domain BSY240_1247 PF01168 Alanine racemase, N-terminal domain BSY240_1247 PF00842 Alanine racemase, C-terminal domain BSY240_1248 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BSY240_125 PF03466 LysR substrate binding domain BSY240_125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_1250 PF06745 KaiC BSY240_1250 PF18073 Rubredoxin metal binding domain BSY240_1251 PF02674 Colicin V production protein BSY240_1252 PF13537 Glutamine amidotransferase domain BSY240_1252 PF00156 Phosphoribosyl transferase domain BSY240_1253 PF00106 short chain dehydrogenase BSY240_1254 PF08448 PAS fold BSY240_1254 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1257 PF09190 DALR domain BSY240_1257 PF01406 tRNA synthetases class I (C) catalytic domain BSY240_1258 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BSY240_126 PF02534 Type IV secretory system Conjugative DNA transfer BSY240_1263 PF00561 alpha/beta hydrolase fold BSY240_1264 PF00682 HMGL-like BSY240_1264 PF08502 LeuA allosteric (dimerisation) domain BSY240_1265 PF00892 EamA-like transporter family BSY240_1266 PF03641 Possible lysine decarboxylase BSY240_1268 PF00664 ABC transporter transmembrane region BSY240_1268 PF00005 ABC transporter BSY240_1269 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1269 PF17158 Membrane-associated sensor, integral membrane domain BSY240_1270 PF02666 Phosphatidylserine decarboxylase BSY240_1271 PF01066 CDP-alcohol phosphatidyltransferase BSY240_1274 PF00293 NUDIX domain BSY240_1278 PF01571 Aminomethyltransferase folate-binding domain BSY240_1279 PF01966 HD domain BSY240_128 PF01443 Viral (Superfamily 1) RNA helicase BSY240_128 PF17841 BID domain of Bartonella effector protein (Bep) BSY240_128 PF03389 MobA/MobL family BSY240_1282 PF00924 Mechanosensitive ion channel BSY240_1282 PF05552 Conserved TM helix BSY240_1284 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BSY240_1284 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BSY240_1285 PF02910 Fumarate reductase flavoprotein C-term BSY240_1285 PF00890 FAD binding domain BSY240_1286 PF02445 Quinolinate synthetase A protein BSY240_1288 PF01966 HD domain BSY240_1291 PF11967 Recombination protein O N terminal BSY240_1291 PF02565 Recombination protein O C terminal BSY240_1294 PF05145 Transition state regulatory protein AbrB BSY240_1295 PF01926 50S ribosome-binding GTPase BSY240_1295 PF07650 KH domain BSY240_1296 PF14622 Ribonuclease-III-like BSY240_1296 PF00035 Double-stranded RNA binding motif BSY240_1297 PF10502 Signal peptidase, peptidase S26 BSY240_1298 PF01648 4'-phosphopantetheinyl transferase superfamily BSY240_13 PF00005 ABC transporter BSY240_1301 PF02824 TGS domain BSY240_1301 PF04607 Region found in RelA / SpoT proteins BSY240_1301 PF13291 ACT domain BSY240_1302 PF01192 RNA polymerase Rpb6 BSY240_1304 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BSY240_1304 PF12833 Helix-turn-helix domain BSY240_1304 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BSY240_1304 PF02805 Metal binding domain of Ada BSY240_1307 PF01668 SmpB protein BSY240_1309 PF00701 Dihydrodipicolinate synthetase family BSY240_1310 PF04235 Protein of unknown function (DUF418) BSY240_1312 PF00701 Dihydrodipicolinate synthetase family BSY240_1313 PF01464 Transglycosylase SLT domain BSY240_1313 PF14718 Soluble lytic murein transglycosylase L domain BSY240_1314 PF00561 alpha/beta hydrolase fold BSY240_1315 PF02530 Porin subfamily BSY240_1317 PF02530 Porin subfamily BSY240_1318 PF00589 Phage integrase family BSY240_1318 PF02899 Phage integrase, N-terminal SAM-like domain BSY240_1319 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_1319 PF14759 Reductase C-terminal BSY240_132 PF07729 FCD domain BSY240_132 PF00392 Bacterial regulatory proteins, gntR family BSY240_1322 PF00155 Aminotransferase class I and II BSY240_1327 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BSY240_1327 PF01048 Phosphorylase superfamily BSY240_133 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSY240_133 PF00005 ABC transporter BSY240_1334 PF00202 Aminotransferase class-III BSY240_1335 PF00120 Glutamine synthetase, catalytic domain BSY240_1336 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_1337 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1338 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_1338 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1339 PF00005 ABC transporter BSY240_1339 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_134 PF00005 ABC transporter BSY240_1340 PF00781 Diacylglycerol kinase catalytic domain BSY240_1342 PF07690 Major Facilitator Superfamily BSY240_1343 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_1343 PF00107 Zinc-binding dehydrogenase BSY240_1344 PF01037 Lrp/AsnC ligand binding domain BSY240_1346 PF01638 HxlR-like helix-turn-helix BSY240_1347 PF03734 L,D-transpeptidase catalytic domain BSY240_1347 PF01476 LysM domain BSY240_135 PF02653 Branched-chain amino acid transport system / permease component BSY240_1350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSY240_1350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSY240_1351 PF01565 FAD binding domain BSY240_1351 PF02913 FAD linked oxidases, C-terminal domain BSY240_1355 PF00012 Hsp70 protein BSY240_1362 PF17202 Single cache domain 3 BSY240_1362 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1362 PF00672 HAMP domain BSY240_1363 PF11940 Domain of unknown function (DUF3458) Ig-like fold BSY240_1363 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BSY240_1363 PF01433 Peptidase family M1 domain BSY240_1364 PF00989 PAS fold BSY240_1364 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1365 PF08335 GlnD PII-uridylyltransferase BSY240_1365 PF03710 Glutamate-ammonia ligase adenylyltransferase BSY240_1366 PF00672 HAMP domain BSY240_1366 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1367 PF00072 Response regulator receiver domain BSY240_1367 PF00486 Transcriptional regulatory protein, C terminal BSY240_1368 PF13180 PDZ domain BSY240_1371 PF03918 Cytochrome C biogenesis protein BSY240_1372 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BSY240_1372 PF01578 Cytochrome C assembly protein BSY240_1373 PF03100 CcmE BSY240_1376 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1376 PF00672 HAMP domain BSY240_1377 PF00072 Response regulator receiver domain BSY240_1377 PF00486 Transcriptional regulatory protein, C terminal BSY240_1385 PF01850 PIN domain BSY240_1402 PF04860 Phage portal protein BSY240_1412 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1413 PF02627 Carboxymuconolactone decarboxylase family BSY240_1415 PF09278 MerR, DNA binding BSY240_1415 PF00376 MerR family regulatory protein BSY240_1416 PF00403 Heavy-metal-associated domain BSY240_1417 PF04221 RelB antitoxin BSY240_1419 PF03692 Putative zinc- or iron-chelating domain BSY240_1420 PF00905 Penicillin binding protein transpeptidase domain BSY240_1420 PF00912 Transglycosylase BSY240_1421 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1422 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1431 PF08000 Bacterial PH domain BSY240_1436 PF01966 HD domain BSY240_1436 PF11871 Domain of unknown function (DUF3391) BSY240_1440 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system BSY240_1442 PF00672 HAMP domain BSY240_1442 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1442 PF17200 Single Cache domain 2 BSY240_1443 PF00534 Glycosyl transferases group 1 BSY240_1443 PF13439 Glycosyltransferase Family 4 BSY240_1445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1445 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1446 PF17264 Family of unknown function (DUF5330) BSY240_1447 PF02657 Fe-S metabolism associated domain BSY240_1449 PF11638 DnaA N-terminal domain BSY240_1449 PF00308 Bacterial dnaA protein BSY240_1449 PF08299 Bacterial dnaA protein helix-turn-helix BSY240_1450 PF05443 ROS/MUCR transcriptional regulator protein BSY240_1451 PF03334 Na+/H+ antiporter subunit BSY240_1452 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BSY240_1453 PF01899 Na+/H+ ion antiporter subunit BSY240_1455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSY240_1458 PF01641 SelR domain BSY240_146 PF04402 Protein of unknown function (DUF541) BSY240_1462 PF00570 HRDC domain BSY240_1462 PF09382 RQC domain BSY240_1462 PF16124 RecQ zinc-binding BSY240_1462 PF00271 Helicase conserved C-terminal domain BSY240_1462 PF00270 DEAD/DEAH box helicase BSY240_1467 PF16884 N-terminal domain of oxidoreductase BSY240_1467 PF00107 Zinc-binding dehydrogenase BSY240_1471 PF03006 Haemolysin-III related BSY240_1472 PF01124 MAPEG family BSY240_1473 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1473 PF00672 HAMP domain BSY240_1477 PF00005 ABC transporter BSY240_1478 PF02653 Branched-chain amino acid transport system / permease component BSY240_1479 PF13407 Periplasmic binding protein domain BSY240_148 PF02607 B12 binding domain BSY240_148 PF02574 Homocysteine S-methyltransferase BSY240_148 PF02310 B12 binding domain BSY240_148 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSY240_148 PF00809 Pterin binding enzyme BSY240_1482 PF13419 Haloacid dehalogenase-like hydrolase BSY240_1485 PF09335 SNARE associated Golgi protein BSY240_1490 PF07568 Histidine kinase BSY240_1490 PF12282 Signal transduction histidine kinase BSY240_1490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1496 PF05872 Bacterial protein of unknown function (DUF853) BSY240_1498 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BSY240_1500 PF01810 LysE type translocator BSY240_1502 PF00487 Fatty acid desaturase BSY240_1504 PF00313 'Cold-shock' DNA-binding domain BSY240_1505 PF01165 Ribosomal protein S21 BSY240_1507 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_1507 PF18029 Glyoxalase-like domain BSY240_1512 PF02566 OsmC-like protein BSY240_1513 PF01047 MarR family BSY240_1514 PF10011 Predicted membrane protein (DUF2254) BSY240_1518 PF17969 L,D-transpeptidase C-terminal domain BSY240_1518 PF03734 L,D-transpeptidase catalytic domain BSY240_1520 PF17969 L,D-transpeptidase C-terminal domain BSY240_1520 PF03734 L,D-transpeptidase catalytic domain BSY240_1521 PF02203 Tar ligand binding domain homologue BSY240_1521 PF00672 HAMP domain BSY240_1521 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1522 PF07690 Major Facilitator Superfamily BSY240_1526 PF13185 GAF domain BSY240_1526 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1526 PF00563 EAL domain BSY240_153 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_153 PF00107 Zinc-binding dehydrogenase BSY240_1537 PF00563 EAL domain BSY240_1537 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1537 PF03707 Bacterial signalling protein N terminal repeat BSY240_1538 PF00109 Beta-ketoacyl synthase, N-terminal domain BSY240_1538 PF00698 Acyl transferase domain BSY240_1538 PF00107 Zinc-binding dehydrogenase BSY240_1538 PF16197 Ketoacyl-synthetase C-terminal extension BSY240_1538 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_1538 PF08659 KR domain BSY240_1538 PF02801 Beta-ketoacyl synthase, C-terminal domain BSY240_1538 PF00550 Phosphopantetheine attachment site BSY240_1538 PF14765 Polyketide synthase dehydratase BSY240_154 PF08402 TOBE domain BSY240_154 PF00005 ABC transporter BSY240_1540 PF00563 EAL domain BSY240_1540 PF12792 CSS motif domain associated with EAL BSY240_1541 PF00440 Bacterial regulatory proteins, tetR family BSY240_1541 PF13977 BetI-type transcriptional repressor, C-terminal BSY240_1542 PF00171 Aldehyde dehydrogenase family BSY240_1543 PF05199 GMC oxidoreductase BSY240_1543 PF00732 GMC oxidoreductase BSY240_1545 PF09924 Uncharacterised conserved protein (DUF2156) BSY240_1545 PF03706 Lysylphosphatidylglycerol synthase TM region BSY240_1549 PF02805 Metal binding domain of Ada BSY240_1549 PF06029 AlkA N-terminal domain BSY240_1549 PF12833 Helix-turn-helix domain BSY240_1549 PF00730 HhH-GPD superfamily base excision DNA repair protein BSY240_155 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_1558 PF02082 Transcriptional regulator BSY240_1559 PF01507 Phosphoadenosine phosphosulfate reductase family BSY240_1560 PF01507 Phosphoadenosine phosphosulfate reductase family BSY240_1561 PF00009 Elongation factor Tu GTP binding domain BSY240_1564 PF00672 HAMP domain BSY240_1564 PF02203 Tar ligand binding domain homologue BSY240_1564 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1565 PF00356 Bacterial regulatory proteins, lacI family BSY240_1565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BSY240_1571 PF04542 Sigma-70 region 2 BSY240_1571 PF08281 Sigma-70, region 4 BSY240_1571 PF12680 SnoaL-like domain BSY240_1573 PF00593 TonB dependent receptor BSY240_1573 PF07715 TonB-dependent Receptor Plug Domain BSY240_1575 PF01032 FecCD transport family BSY240_1576 PF01032 FecCD transport family BSY240_1577 PF00005 ABC transporter BSY240_1579 PF01270 Glycosyl hydrolases family 8 BSY240_158 PF01380 SIS domain BSY240_158 PF01418 Helix-turn-helix domain, rpiR family BSY240_1581 PF07238 PilZ domain BSY240_1581 PF00535 Glycosyl transferase family 2 BSY240_1583 PF00664 ABC transporter transmembrane region BSY240_1583 PF00005 ABC transporter BSY240_1585 PF01965 DJ-1/PfpI family BSY240_1593 PF08753 NikR C terminal nickel binding domain BSY240_1593 PF01402 Ribbon-helix-helix protein, copG family BSY240_1595 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BSY240_1595 PF02896 PEP-utilising enzyme, TIM barrel domain BSY240_1595 PF00391 PEP-utilising enzyme, mobile domain BSY240_1597 PF02896 PEP-utilising enzyme, TIM barrel domain BSY240_1597 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BSY240_1597 PF00391 PEP-utilising enzyme, mobile domain BSY240_1598 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_16 PF07969 Amidohydrolase family BSY240_1600 PF07690 Major Facilitator Superfamily BSY240_1602 PF02463 RecF/RecN/SMC N terminal domain BSY240_1604 PF17336 Family of unknown function (DUF5368) BSY240_1608 PF00072 Response regulator receiver domain BSY240_1608 PF00211 Adenylate and Guanylate cyclase catalytic domain BSY240_161 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_1610 PF01740 STAS domain BSY240_1610 PF00916 Sulfate permease family BSY240_1612 PF00730 HhH-GPD superfamily base excision DNA repair protein BSY240_1612 PF14815 NUDIX domain BSY240_1614 PF00691 OmpA family BSY240_1615 PF01555 DNA methylase BSY240_1615 PF18755 Restriction Enzyme Adenine Methylase Associated BSY240_1618 PF01361 Tautomerase enzyme BSY240_162 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_1620 PF03060 Nitronate monooxygenase BSY240_1622 PF02632 BioY family BSY240_1624 PF00392 Bacterial regulatory proteins, gntR family BSY240_1624 PF07729 FCD domain BSY240_1626 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BSY240_163 PF00120 Glutamine synthetase, catalytic domain BSY240_163 PF03951 Glutamine synthetase, beta-Grasp domain BSY240_1630 PF00893 Small Multidrug Resistance protein BSY240_1632 PF13419 Haloacid dehalogenase-like hydrolase BSY240_1633 PF00781 Diacylglycerol kinase catalytic domain BSY240_1634 PF00296 Luciferase-like monooxygenase BSY240_1635 PF01381 Helix-turn-helix BSY240_1637 PF14821 Threonine synthase N terminus BSY240_1637 PF00291 Pyridoxal-phosphate dependent enzyme BSY240_1638 PF00675 Insulinase (Peptidase family M16) BSY240_1638 PF05193 Peptidase M16 inactive domain BSY240_1639 PF13302 Acetyltransferase (GNAT) domain BSY240_164 PF00171 Aldehyde dehydrogenase family BSY240_1640 PF08447 PAS fold BSY240_1640 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1640 PF00563 EAL domain BSY240_1640 PF08448 PAS fold BSY240_1641 PF01810 LysE type translocator BSY240_1644 PF02622 Uncharacterized ACR, COG1678 BSY240_1646 PF00462 Glutaredoxin BSY240_1646 PF08534 Redoxin BSY240_1648 PF00075 RNase H BSY240_1649 PF01636 Phosphotransferase enzyme family BSY240_165 PF00465 Iron-containing alcohol dehydrogenase BSY240_1651 PF03707 Bacterial signalling protein N terminal repeat BSY240_1651 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1651 PF00563 EAL domain BSY240_1653 PF02401 LytB protein BSY240_1655 PF02104 SURF1 family BSY240_1657 PF00510 Cytochrome c oxidase subunit III BSY240_1658 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BSY240_166 PF07015 VirC1 protein BSY240_1660 PF01040 UbiA prenyltransferase family BSY240_1661 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSY240_1662 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BSY240_1662 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSY240_1664 PF01523 Putative modulator of DNA gyrase BSY240_1666 PF07943 Penicillin-binding protein 5, C-terminal domain BSY240_1666 PF00768 D-alanyl-D-alanine carboxypeptidase BSY240_1667 PF00376 MerR family regulatory protein BSY240_1667 PF09278 MerR, DNA binding BSY240_1668 PF07690 Major Facilitator Superfamily BSY240_1669 PF01653 NAD-dependent DNA ligase adenylation domain BSY240_1669 PF12826 Helix-hairpin-helix motif BSY240_1669 PF03120 NAD-dependent DNA ligase OB-fold domain BSY240_1669 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BSY240_1669 PF00533 BRCA1 C Terminus (BRCT) domain BSY240_167 PF01476 LysM domain BSY240_167 PF03734 L,D-transpeptidase catalytic domain BSY240_1670 PF01243 Pyridoxamine 5'-phosphate oxidase BSY240_1670 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BSY240_1672 PF01556 DnaJ C terminal domain BSY240_1672 PF00684 DnaJ central domain BSY240_1672 PF00226 DnaJ domain BSY240_1674 PF00300 Histidine phosphatase superfamily (branch 1) BSY240_1676 PF00563 EAL domain BSY240_1676 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1676 PF03707 Bacterial signalling protein N terminal repeat BSY240_1677 PF01264 Chorismate synthase BSY240_1678 PF00925 GTP cyclohydrolase II BSY240_1678 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BSY240_1682 PF06224 Winged helix DNA-binding domain BSY240_1683 PF00005 ABC transporter BSY240_1684 PF02361 Cobalt transport protein BSY240_1685 PF02632 BioY family BSY240_1690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BSY240_1690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BSY240_1692 PF03692 Putative zinc- or iron-chelating domain BSY240_1694 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BSY240_1694 PF02779 Transketolase, pyrimidine binding domain BSY240_1694 PF02780 Transketolase, C-terminal domain BSY240_1695 PF05726 Pirin C-terminal cupin domain BSY240_1695 PF02678 Pirin BSY240_1700 PF16868 NMT1-like family BSY240_1701 PF01037 Lrp/AsnC ligand binding domain BSY240_1702 PF00005 ABC transporter BSY240_1703 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_1704 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1705 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1706 PF01053 Cys/Met metabolism PLP-dependent enzyme BSY240_1707 PF02574 Homocysteine S-methyltransferase BSY240_1708 PF03741 Integral membrane protein TerC family BSY240_1709 PF02609 Exonuclease VII small subunit BSY240_1710 PF00850 Histone deacetylase domain BSY240_1712 PF13426 PAS domain BSY240_1712 PF08447 PAS fold BSY240_1712 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1713 PF01728 FtsJ-like methyltransferase BSY240_1713 PF01479 S4 domain BSY240_1714 PF05958 tRNA (Uracil-5-)-methyltransferase BSY240_1717 PF00672 HAMP domain BSY240_1717 PF02743 Cache domain BSY240_1717 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1718 PF00378 Enoyl-CoA hydratase/isomerase BSY240_1719 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSY240_1719 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSY240_1719 PF02770 Acyl-CoA dehydrogenase, middle domain BSY240_1719 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSY240_172 PF00892 EamA-like transporter family BSY240_1721 PF03776 Septum formation topological specificity factor MinE BSY240_1722 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSY240_1723 PF03775 Septum formation inhibitor MinC, C-terminal domain BSY240_1724 PF07886 BA14K-like protein BSY240_1726 PF00175 Oxidoreductase NAD-binding domain BSY240_1726 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_1726 PF00970 Oxidoreductase FAD-binding domain BSY240_1727 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BSY240_1727 PF00355 Rieske [2Fe-2S] domain BSY240_1730 PF03481 Putative GTP-binding controlling metal-binding BSY240_1730 PF01300 Telomere recombination BSY240_1731 PF02913 FAD linked oxidases, C-terminal domain BSY240_1731 PF01565 FAD binding domain BSY240_1732 PF03459 TOBE domain BSY240_1732 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_1733 PF03459 TOBE domain BSY240_1733 PF00005 ABC transporter BSY240_1734 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1738 PF01040 UbiA prenyltransferase family BSY240_1739 PF06629 MltA-interacting protein MipA BSY240_174 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSY240_174 PF00205 Thiamine pyrophosphate enzyme, central domain BSY240_174 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSY240_1740 PF01063 Amino-transferase class IV BSY240_1741 PF00326 Prolyl oligopeptidase family BSY240_1741 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BSY240_1744 PF13411 MerR HTH family regulatory protein BSY240_1748 PF01965 DJ-1/PfpI family BSY240_175 PF02515 CoA-transferase family III BSY240_1750 PF00034 Cytochrome c BSY240_1751 PF01322 Cytochrome C' BSY240_1754 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_1757 PF17674 HHH domain BSY240_1757 PF00575 S1 RNA binding domain BSY240_1757 PF16921 Tex protein YqgF-like domain BSY240_1757 PF09371 Tex-like protein N-terminal domain BSY240_1758 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BSY240_1758 PF02844 Phosphoribosylglycinamide synthetase, N domain BSY240_1758 PF02843 Phosphoribosylglycinamide synthetase, C domain BSY240_1760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1760 PF12729 Four helix bundle sensory module for signal transduction BSY240_1760 PF00672 HAMP domain BSY240_1761 PF04463 Protein of unknown function (DUF523) BSY240_1763 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BSY240_1764 PF05746 DALR anticodon binding domain BSY240_1764 PF02092 Glycyl-tRNA synthetase beta subunit BSY240_1766 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BSY240_1767 PF04011 LemA family BSY240_1768 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1768 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1768 PF00989 PAS fold BSY240_1769 PF00158 Sigma-54 interaction domain BSY240_1769 PF00072 Response regulator receiver domain BSY240_1769 PF02954 Bacterial regulatory protein, Fis family BSY240_177 PF12848 ABC transporter BSY240_177 PF00005 ABC transporter BSY240_1770 PF02091 Glycyl-tRNA synthetase alpha subunit BSY240_1771 PF08447 PAS fold BSY240_1771 PF13426 PAS domain BSY240_1771 PF07536 HWE histidine kinase BSY240_1773 PF01343 Peptidase family S49 BSY240_1773 PF06965 Na+/H+ antiporter 1 BSY240_1776 PF00348 Polyprenyl synthetase BSY240_1778 PF00288 GHMP kinases N terminal domain BSY240_1778 PF08544 GHMP kinases C terminal BSY240_1779 PF00994 Probable molybdopterin binding domain BSY240_178 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_178 PF02743 Cache domain BSY240_178 PF00672 HAMP domain BSY240_1782 PF01351 Ribonuclease HII BSY240_1783 PF00430 ATP synthase B/B' CF(0) BSY240_1784 PF00430 ATP synthase B/B' CF(0) BSY240_1785 PF00137 ATP synthase subunit C BSY240_1786 PF00119 ATP synthase A chain BSY240_1787 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter BSY240_179 PF13847 Methyltransferase domain BSY240_179 PF03551 Transcriptional regulator PadR-like family BSY240_1790 PF02705 K+ potassium transporter BSY240_1791 PF01544 CorA-like Mg2+ transporter protein BSY240_1792 PF01883 Iron-sulfur cluster assembly protein BSY240_1792 PF10609 NUBPL iron-transfer P-loop NTPase BSY240_1793 PF03472 Autoinducer binding domain BSY240_1793 PF00196 Bacterial regulatory proteins, luxR family BSY240_1794 PF08450 SMP-30/Gluconolactonase/LRE-like region BSY240_1796 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSY240_1797 PF06253 Trimethylamine methyltransferase (MTTB) BSY240_1798 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_1798 PF03466 LysR substrate binding domain BSY240_1799 PF13188 PAS domain BSY240_1799 PF03707 Bacterial signalling protein N terminal repeat BSY240_1799 PF00990 Diguanylate cyclase, GGDEF domain BSY240_1799 PF00563 EAL domain BSY240_18 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_18 PF01266 FAD dependent oxidoreductase BSY240_18 PF16350 FAD dependent oxidoreductase central domain BSY240_18 PF01571 Aminomethyltransferase folate-binding domain BSY240_180 PF02219 Methylenetetrahydrofolate reductase BSY240_1800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1800 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1800 PF01627 Hpt domain BSY240_1800 PF00989 PAS fold BSY240_1800 PF00072 Response regulator receiver domain BSY240_1800 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_1801 PF08676 MutL C terminal dimerisation domain BSY240_1801 PF01119 DNA mismatch repair protein, C-terminal domain BSY240_1803 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BSY240_1805 PF00534 Glycosyl transferases group 1 BSY240_1805 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BSY240_1808 PF01523 Putative modulator of DNA gyrase BSY240_1809 PF00999 Sodium/hydrogen exchanger family BSY240_1809 PF02254 TrkA-N domain BSY240_1810 PF01734 Patatin-like phospholipase BSY240_1812 PF00849 RNA pseudouridylate synthase BSY240_1812 PF01479 S4 domain BSY240_1813 PF14437 MafB19-like deaminase BSY240_1817 PF08264 Anticodon-binding domain of tRNA BSY240_1817 PF00133 tRNA synthetases class I (I, L, M and V) BSY240_182 PF01183 Glycosyl hydrolases family 25 BSY240_1822 PF04143 Sulphur transport BSY240_1823 PF06574 FAD synthetase BSY240_1823 PF01687 Riboflavin kinase BSY240_1825 PF02417 Chromate transporter BSY240_1826 PF00166 Chaperonin 10 Kd subunit BSY240_1827 PF00118 TCP-1/cpn60 chaperonin family BSY240_1829 PF00043 Glutathione S-transferase, C-terminal domain BSY240_1829 PF02798 Glutathione S-transferase, N-terminal domain BSY240_1830 PF07681 DoxX BSY240_1831 PF13847 Methyltransferase domain BSY240_1832 PF01634 ATP phosphoribosyltransferase BSY240_1833 PF13393 Histidyl-tRNA synthetase BSY240_1834 PF03129 Anticodon binding domain BSY240_1834 PF13393 Histidyl-tRNA synthetase BSY240_1841 PF03352 Methyladenine glycosylase BSY240_1842 PF17969 L,D-transpeptidase C-terminal domain BSY240_1842 PF03734 L,D-transpeptidase catalytic domain BSY240_1843 PF01476 LysM domain BSY240_1843 PF03734 L,D-transpeptidase catalytic domain BSY240_1843 PF17969 L,D-transpeptidase C-terminal domain BSY240_1845 PF13183 4Fe-4S dicluster domain BSY240_1845 PF02754 Cysteine-rich domain BSY240_1847 PF01565 FAD binding domain BSY240_1848 PF01565 FAD binding domain BSY240_1848 PF02913 FAD linked oxidases, C-terminal domain BSY240_1849 PF03466 LysR substrate binding domain BSY240_1849 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_185 PF00563 EAL domain BSY240_185 PF00990 Diguanylate cyclase, GGDEF domain BSY240_185 PF03707 Bacterial signalling protein N terminal repeat BSY240_185 PF13188 PAS domain BSY240_1852 PF07729 FCD domain BSY240_1852 PF00392 Bacterial regulatory proteins, gntR family BSY240_1853 PF02754 Cysteine-rich domain BSY240_1854 PF11870 Domain of unknown function (DUF3390) BSY240_1854 PF02589 LUD domain BSY240_1854 PF13183 4Fe-4S dicluster domain BSY240_1855 PF02589 LUD domain BSY240_1856 PF13439 Glycosyltransferase Family 4 BSY240_1856 PF00534 Glycosyl transferases group 1 BSY240_1857 PF05116 Sucrose-6F-phosphate phosphohydrolase BSY240_1859 PF01384 Phosphate transporter family BSY240_1860 PF04452 RNA methyltransferase BSY240_1861 PF04107 Glutamate-cysteine ligase family 2(GCS2) BSY240_1863 PF12729 Four helix bundle sensory module for signal transduction BSY240_1863 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_1863 PF00672 HAMP domain BSY240_1865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_1865 PF03466 LysR substrate binding domain BSY240_1866 PF08361 MAATS-type transcriptional repressor, C-terminal region BSY240_1866 PF00440 Bacterial regulatory proteins, tetR family BSY240_1869 PF00107 Zinc-binding dehydrogenase BSY240_1869 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_1870 PF01738 Dienelactone hydrolase family BSY240_1873 PF00571 CBS domain BSY240_1873 PF00478 IMP dehydrogenase / GMP reductase domain BSY240_1876 PF07690 Major Facilitator Superfamily BSY240_1878 PF01728 FtsJ-like methyltransferase BSY240_1879 PF02541 Ppx/GppA phosphatase family BSY240_1881 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BSY240_1881 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BSY240_1882 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BSY240_189 PF00365 Phosphofructokinase BSY240_1890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_1890 PF03466 LysR substrate binding domain BSY240_1893 PF05649 Peptidase family M13 BSY240_1893 PF01431 Peptidase family M13 BSY240_1898 PF08019 Phosphoethanolamine transferase EptA/EptB BSY240_1898 PF00884 Sulfatase BSY240_19 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_19 PF01571 Aminomethyltransferase folate-binding domain BSY240_19 PF16350 FAD dependent oxidoreductase central domain BSY240_19 PF01266 FAD dependent oxidoreductase BSY240_190 PF00226 DnaJ domain BSY240_190 PF05099 Tellurite resistance protein TerB BSY240_1901 PF00072 Response regulator receiver domain BSY240_1901 PF00486 Transcriptional regulatory protein, C terminal BSY240_1903 PF07702 UTRA domain BSY240_1903 PF00392 Bacterial regulatory proteins, gntR family BSY240_1904 PF07969 Amidohydrolase family BSY240_1906 PF00005 ABC transporter BSY240_1907 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1908 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1908 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1908 PF08521 Two-component sensor kinase N-terminal BSY240_1909 PF00072 Response regulator receiver domain BSY240_1909 PF00486 Transcriptional regulatory protein, C terminal BSY240_191 PF01510 N-acetylmuramoyl-L-alanine amidase BSY240_1912 PF04303 PrpF protein BSY240_1913 PF07690 Major Facilitator Superfamily BSY240_1919 PF00376 MerR family regulatory protein BSY240_1919 PF09278 MerR, DNA binding BSY240_1922 PF00873 AcrB/AcrD/AcrF family BSY240_1924 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1924 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1924 PF00672 HAMP domain BSY240_1925 PF00486 Transcriptional regulatory protein, C terminal BSY240_1925 PF00072 Response regulator receiver domain BSY240_1927 PF00571 CBS domain BSY240_1927 PF01595 Cyclin M transmembrane N-terminal domain BSY240_1928 PF13091 PLD-like domain BSY240_1930 PF00924 Mechanosensitive ion channel BSY240_1931 PF00459 Inositol monophosphatase family BSY240_1932 PF00005 ABC transporter BSY240_1932 PF08402 TOBE domain BSY240_1933 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1936 PF00486 Transcriptional regulatory protein, C terminal BSY240_1936 PF00072 Response regulator receiver domain BSY240_1937 PF00512 His Kinase A (phospho-acceptor) domain BSY240_1937 PF13188 PAS domain BSY240_1937 PF00072 Response regulator receiver domain BSY240_1937 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1937 PF08448 PAS fold BSY240_1938 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_1938 PF10414 Sirohaem synthase dimerisation region BSY240_1939 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSY240_1939 PF04324 BFD-like [2Fe-2S] binding domain BSY240_1939 PF00384 Molybdopterin oxidoreductase BSY240_1939 PF01568 Molydopterin dinucleotide binding domain BSY240_194 PF02381 MraZ protein, putative antitoxin-like BSY240_1941 PF18267 Rubredoxin NAD+ reductase C-terminal domain BSY240_1941 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_1941 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BSY240_1941 PF04324 BFD-like [2Fe-2S] binding domain BSY240_1941 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BSY240_1942 PF00005 ABC transporter BSY240_1943 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_1946 PF08376 Nitrate and nitrite sensing BSY240_1946 PF03861 ANTAR domain BSY240_1947 PF00005 ABC transporter BSY240_1948 PF02687 FtsX-like permease family BSY240_1948 PF12704 MacB-like periplasmic core domain BSY240_195 PF01795 MraW methylase family BSY240_1957 PF01739 CheR methyltransferase, SAM binding domain BSY240_1957 PF03705 CheR methyltransferase, all-alpha domain BSY240_1957 PF01339 CheB methylesterase BSY240_1957 PF08448 PAS fold BSY240_1959 PF07883 Cupin domain BSY240_1962 PF04542 Sigma-70 region 2 BSY240_1962 PF08281 Sigma-70, region 4 BSY240_1963 PF00440 Bacterial regulatory proteins, tetR family BSY240_1965 PF00732 GMC oxidoreductase BSY240_1965 PF05199 GMC oxidoreductase BSY240_1966 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSY240_1966 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSY240_1967 PF01791 DeoC/LacD family aldolase BSY240_1968 PF01266 FAD dependent oxidoreductase BSY240_1968 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BSY240_1969 PF00248 Aldo/keto reductase family BSY240_197 PF00905 Penicillin binding protein transpeptidase domain BSY240_197 PF03717 Penicillin-binding Protein dimerisation domain BSY240_1970 PF04198 Putative sugar-binding domain BSY240_1971 PF02653 Branched-chain amino acid transport system / permease component BSY240_1972 PF00005 ABC transporter BSY240_1977 PF13581 Histidine kinase-like ATPase domain BSY240_1977 PF07568 Histidine kinase BSY240_1977 PF13426 PAS domain BSY240_198 PF08245 Mur ligase middle domain BSY240_198 PF01225 Mur ligase family, catalytic domain BSY240_198 PF02875 Mur ligase family, glutamate ligase domain BSY240_1980 PF00582 Universal stress protein family BSY240_1981 PF00916 Sulfate permease family BSY240_1981 PF01740 STAS domain BSY240_1982 PF00313 'Cold-shock' DNA-binding domain BSY240_1985 PF00072 Response regulator receiver domain BSY240_1985 PF13426 PAS domain BSY240_1985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_1988 PF00534 Glycosyl transferases group 1 BSY240_1988 PF13439 Glycosyltransferase Family 4 BSY240_199 PF01225 Mur ligase family, catalytic domain BSY240_199 PF02875 Mur ligase family, glutamate ligase domain BSY240_199 PF08245 Mur ligase middle domain BSY240_1999 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSY240_2 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BSY240_200 PF00953 Glycosyl transferase family 4 BSY240_2003 PF03334 Na+/H+ antiporter subunit BSY240_2004 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2005 PF00158 Sigma-54 interaction domain BSY240_2005 PF00072 Response regulator receiver domain BSY240_2005 PF02954 Bacterial regulatory protein, Fis family BSY240_2007 PF07715 TonB-dependent Receptor Plug Domain BSY240_201 PF08245 Mur ligase middle domain BSY240_2011 PF03334 Na+/H+ antiporter subunit BSY240_2012 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BSY240_2013 PF01899 Na+/H+ ion antiporter subunit BSY240_2014 PF00361 Proton-conducting membrane transporter BSY240_2015 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSY240_2016 PF13244 Domain of unknown function (DUF4040) BSY240_2016 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BSY240_2016 PF00361 Proton-conducting membrane transporter BSY240_2016 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSY240_2018 PF02355 Protein export membrane protein BSY240_2018 PF07549 SecD/SecF GG Motif BSY240_2019 PF07549 SecD/SecF GG Motif BSY240_2019 PF02355 Protein export membrane protein BSY240_202 PF01098 Cell cycle protein BSY240_2021 PF13416 Bacterial extracellular solute-binding protein BSY240_2022 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2023 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2024 PF08402 TOBE domain BSY240_2024 PF00005 ABC transporter BSY240_2025 PF00459 Inositol monophosphatase family BSY240_2027 PF00005 ABC transporter BSY240_2027 PF08402 TOBE domain BSY240_2028 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2029 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_203 PF03033 Glycosyltransferase family 28 N-terminal domain BSY240_203 PF04101 Glycosyltransferase family 28 C-terminal domain BSY240_2031 PF00356 Bacterial regulatory proteins, lacI family BSY240_2034 PF03109 ABC1 family BSY240_2036 PF12833 Helix-turn-helix domain BSY240_2037 PF00593 TonB dependent receptor BSY240_2037 PF07715 TonB-dependent Receptor Plug Domain BSY240_2038 PF01497 Periplasmic binding protein BSY240_2039 PF01032 FecCD transport family BSY240_204 PF01225 Mur ligase family, catalytic domain BSY240_204 PF08245 Mur ligase middle domain BSY240_204 PF02875 Mur ligase family, glutamate ligase domain BSY240_2040 PF01032 FecCD transport family BSY240_2041 PF00005 ABC transporter BSY240_2045 PF04304 Protein of unknown function (DUF454) BSY240_2046 PF08447 PAS fold BSY240_2046 PF00990 Diguanylate cyclase, GGDEF domain BSY240_2046 PF00563 EAL domain BSY240_2046 PF08448 PAS fold BSY240_2047 PF01266 FAD dependent oxidoreductase BSY240_2048 PF00120 Glutamine synthetase, catalytic domain BSY240_2049 PF01266 FAD dependent oxidoreductase BSY240_205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BSY240_205 PF01565 FAD binding domain BSY240_2052 PF05199 GMC oxidoreductase BSY240_2052 PF00732 GMC oxidoreductase BSY240_2053 PF02082 Transcriptional regulator BSY240_2054 PF13416 Bacterial extracellular solute-binding protein BSY240_2055 PF01435 Peptidase family M48 BSY240_2056 PF05987 Bacterial protein of unknown function (DUF898) BSY240_2058 PF00171 Aldehyde dehydrogenase family BSY240_206 PF17158 Membrane-associated sensor, integral membrane domain BSY240_206 PF00990 Diguanylate cyclase, GGDEF domain BSY240_2060 PF04955 HupE / UreJ protein BSY240_2061 PF01063 Amino-transferase class IV BSY240_2066 PF13426 PAS domain BSY240_2066 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2066 PF13188 PAS domain BSY240_2066 PF00989 PAS fold BSY240_2068 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2069 PF13193 AMP-binding enzyme C-terminal domain BSY240_2069 PF00501 AMP-binding enzyme BSY240_207 PF07478 D-ala D-ala ligase C-terminus BSY240_207 PF01820 D-ala D-ala ligase N-terminus BSY240_2072 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2073 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2074 PF08402 TOBE domain BSY240_2074 PF00005 ABC transporter BSY240_2075 PF13416 Bacterial extracellular solute-binding protein BSY240_2076 PF06114 IrrE N-terminal-like domain BSY240_2076 PF01381 Helix-turn-helix BSY240_2076 PF09856 Predicted transcriptional regulator (DUF2083) BSY240_2077 PF00463 Isocitrate lyase family BSY240_208 PF08478 POTRA domain, FtsQ-type BSY240_208 PF03799 Cell division protein FtsQ BSY240_2081 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_2081 PF00672 HAMP domain BSY240_2084 PF00120 Glutamine synthetase, catalytic domain BSY240_2085 PF01266 FAD dependent oxidoreductase BSY240_2086 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BSY240_2086 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BSY240_2087 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BSY240_2088 PF00920 Dehydratase family BSY240_2089 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_2089 PF08447 PAS fold BSY240_2089 PF13426 PAS domain BSY240_209 PF02491 SHS2 domain inserted in FTSA BSY240_2091 PF04542 Sigma-70 region 2 BSY240_2091 PF08281 Sigma-70, region 4 BSY240_2096 PF00005 ABC transporter BSY240_2096 PF17912 MalK OB fold domain BSY240_2096 PF03459 TOBE domain BSY240_2097 PF00128 Alpha amylase, catalytic domain BSY240_2098 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2099 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_21 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_210 PF00091 Tubulin/FtsZ family, GTPase domain BSY240_210 PF12327 FtsZ family, C-terminal domain BSY240_2100 PF01547 Bacterial extracellular solute-binding protein BSY240_2101 PF00356 Bacterial regulatory proteins, lacI family BSY240_2102 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BSY240_2102 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BSY240_2108 PF01311 Bacterial export proteins, family 1 BSY240_2109 PF00771 FHIPEP family BSY240_211 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BSY240_2110 PF01313 Bacterial export proteins, family 3 BSY240_2111 PF03963 Flagellar hook capping protein - N-terminal region BSY240_2112 PF07378 Flagellar protein FlbT BSY240_2115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSY240_2115 PF00460 Flagella basal body rod protein BSY240_2116 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSY240_2116 PF00460 Flagella basal body rod protein BSY240_2116 PF07559 Flagellar basal body protein FlaE BSY240_2117 PF00486 Transcriptional regulatory protein, C terminal BSY240_2119 PF02120 Flagellar hook-length control protein FliK BSY240_212 PF13525 Outer membrane lipoprotein BSY240_2121 PF13677 Membrane MotB of proton-channel complex MotA/MotB BSY240_2121 PF00691 OmpA family BSY240_2123 PF00669 Bacterial flagellin N-terminal helical region BSY240_2123 PF00700 Bacterial flagellin C-terminal helical region BSY240_2124 PF00669 Bacterial flagellin N-terminal helical region BSY240_2124 PF00700 Bacterial flagellin C-terminal helical region BSY240_2125 PF00669 Bacterial flagellin N-terminal helical region BSY240_2125 PF00700 Bacterial flagellin C-terminal helical region BSY240_2126 PF00669 Bacterial flagellin N-terminal helical region BSY240_2126 PF00700 Bacterial flagellin C-terminal helical region BSY240_2127 PF00813 FliP family BSY240_2129 PF02107 Flagellar L-ring protein BSY240_213 PF02463 RecF/RecN/SMC N terminal domain BSY240_2131 PF02119 Flagellar P-ring protein BSY240_2132 PF13144 Chaperone for flagella basal body P-ring formation BSY240_2133 PF00460 Flagella basal body rod protein BSY240_2133 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSY240_2134 PF02049 Flagellar hook-basal body complex protein FliE BSY240_2135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSY240_2136 PF00460 Flagella basal body rod protein BSY240_2138 PF18269 T3SS EscN ATPase C-terminal domain BSY240_2138 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSY240_2139 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSY240_2139 PF00460 Flagella basal body rod protein BSY240_214 PF13091 PLD-like domain BSY240_214 PF13396 Phospholipase_D-nuclease N-terminal BSY240_2140 PF01618 MotA/TolQ/ExbB proton channel family BSY240_2141 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BSY240_2142 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BSY240_2143 PF01706 FliG C-terminal domain BSY240_2143 PF14842 FliG N-terminal domain BSY240_2143 PF14841 FliG middle domain BSY240_2144 PF01312 FlhB HrpN YscU SpaS Family BSY240_2147 PF03472 Autoinducer binding domain BSY240_2147 PF00196 Bacterial regulatory proteins, luxR family BSY240_2148 PF08345 Flagellar M-ring protein C-terminal BSY240_2148 PF01514 Secretory protein of YscJ/FliF family BSY240_2150 PF03975 CheD chemotactic sensory transduction BSY240_2151 PF00072 Response regulator receiver domain BSY240_2152 PF01339 CheB methylesterase BSY240_2152 PF00072 Response regulator receiver domain BSY240_2153 PF01739 CheR methyltransferase, SAM binding domain BSY240_2153 PF03705 CheR methyltransferase, all-alpha domain BSY240_2154 PF01584 CheW-like domain BSY240_2155 PF01584 CheW-like domain BSY240_2155 PF01627 Hpt domain BSY240_2155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2155 PF02895 Signal transducing histidine kinase, homodimeric domain BSY240_2158 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_2159 PF02735 Ku70/Ku80 beta-barrel domain BSY240_216 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BSY240_216 PF00533 BRCA1 C Terminus (BRCT) domain BSY240_216 PF12826 Helix-hairpin-helix motif BSY240_216 PF03120 NAD-dependent DNA ligase OB-fold domain BSY240_216 PF01653 NAD-dependent DNA ligase adenylation domain BSY240_2160 PF13298 DNA polymerase Ligase (LigD) BSY240_2160 PF04679 ATP dependent DNA ligase C terminal region BSY240_2160 PF01068 ATP dependent DNA ligase domain BSY240_2161 PF02735 Ku70/Ku80 beta-barrel domain BSY240_2163 PF08323 Starch synthase catalytic domain BSY240_2163 PF00534 Glycosyl transferases group 1 BSY240_2169 PF13426 PAS domain BSY240_2169 PF07536 HWE histidine kinase BSY240_2169 PF08447 PAS fold BSY240_217 PF00990 Diguanylate cyclase, GGDEF domain BSY240_2173 PF01183 Glycosyl hydrolases family 25 BSY240_2175 PF03061 Thioesterase superfamily BSY240_2177 PF00392 Bacterial regulatory proteins, gntR family BSY240_2177 PF07729 FCD domain BSY240_2178 PF01566 Natural resistance-associated macrophage protein BSY240_2179 PF03746 LamB/YcsF family BSY240_2180 PF07286 Protein of unknown function (DUF1445) BSY240_2181 PF02682 Carboxyltransferase domain, subdomain C and D BSY240_2182 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_2182 PF00364 Biotin-requiring enzyme BSY240_2182 PF00289 Biotin carboxylase, N-terminal domain BSY240_2182 PF02785 Biotin carboxylase C-terminal domain BSY240_2184 PF00378 Enoyl-CoA hydratase/isomerase BSY240_2185 PF13193 AMP-binding enzyme C-terminal domain BSY240_2185 PF00501 AMP-binding enzyme BSY240_2187 PF00171 Aldehyde dehydrogenase family BSY240_2188 PF01494 FAD binding domain BSY240_2194 PF00925 GTP cyclohydrolase II BSY240_2195 PF00107 Zinc-binding dehydrogenase BSY240_2195 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_2197 PF13439 Glycosyltransferase Family 4 BSY240_2197 PF00534 Glycosyl transferases group 1 BSY240_2198 PF01872 RibD C-terminal domain BSY240_22 PF00571 CBS domain BSY240_22 PF00005 ABC transporter BSY240_220 PF00270 DEAD/DEAH box helicase BSY240_220 PF00271 Helicase conserved C-terminal domain BSY240_2204 PF13533 Biotin-lipoyl like BSY240_2205 PF03412 Peptidase C39 family BSY240_2205 PF00005 ABC transporter BSY240_2205 PF00664 ABC transporter transmembrane region BSY240_2206 PF02321 Outer membrane efflux protein BSY240_2207 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BSY240_2207 PF06594 Haemolysin-type calcium binding protein related domain BSY240_2208 PF01370 NAD dependent epimerase/dehydratase family BSY240_2209 PF07729 FCD domain BSY240_2209 PF00392 Bacterial regulatory proteins, gntR family BSY240_2210 PF00701 Dihydrodipicolinate synthetase family BSY240_2211 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSY240_2211 PF13378 Enolase C-terminal domain-like BSY240_2212 PF04909 Amidohydrolase BSY240_2213 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_2215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_2216 PF02423 Ornithine cyclodeaminase/mu-crystallin family BSY240_2217 PF17151 Periplasmic sensor domain BSY240_2217 PF00990 Diguanylate cyclase, GGDEF domain BSY240_2218 PF02631 RecX family BSY240_2220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2220 PF07730 Histidine kinase BSY240_2221 PF13407 Periplasmic binding protein domain BSY240_2222 PF00005 ABC transporter BSY240_2223 PF02653 Branched-chain amino acid transport system / permease component BSY240_2224 PF02653 Branched-chain amino acid transport system / permease component BSY240_2227 PF01638 HxlR-like helix-turn-helix BSY240_2231 PF00294 pfkB family carbohydrate kinase BSY240_2233 PF00392 Bacterial regulatory proteins, gntR family BSY240_2233 PF07729 FCD domain BSY240_2234 PF01209 ubiE/COQ5 methyltransferase family BSY240_2236 PF01032 FecCD transport family BSY240_2237 PF00005 ABC transporter BSY240_2239 PF00155 Aminotransferase class I and II BSY240_2240 PF01037 Lrp/AsnC ligand binding domain BSY240_2241 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_2241 PF00005 ABC transporter BSY240_2242 PF00005 ABC transporter BSY240_2242 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_2243 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2243 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_2244 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_2246 PF00873 AcrB/AcrD/AcrF family BSY240_225 PF01584 CheW-like domain BSY240_2255 PF08401 Domain of unknown function (DUF1738) BSY240_2255 PF18818 Metallopeptidase superfamily domain BSY240_2255 PF13362 Toprim domain BSY240_2256 PF04198 Putative sugar-binding domain BSY240_2257 PF00596 Class II Aldolase and Adducin N-terminal domain BSY240_2259 PF02653 Branched-chain amino acid transport system / permease component BSY240_226 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_226 PF00672 HAMP domain BSY240_2260 PF00005 ABC transporter BSY240_2261 PF01636 Phosphotransferase enzyme family BSY240_2262 PF01008 Initiation factor 2 subunit family BSY240_2263 PF00456 Transketolase, thiamine diphosphate binding domain BSY240_2264 PF02779 Transketolase, pyrimidine binding domain BSY240_2264 PF02780 Transketolase, C-terminal domain BSY240_2265 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BSY240_2267 PF07015 VirC1 protein BSY240_2271 PF00565 Staphylococcal nuclease homologue BSY240_2272 PF02661 Fic/DOC family BSY240_2272 PF13784 Fic/DOC family N-terminal BSY240_2273 PF01443 Viral (Superfamily 1) RNA helicase BSY240_2273 PF03389 MobA/MobL family BSY240_2273 PF17841 BID domain of Bartonella effector protein (Bep) BSY240_2275 PF02534 Type IV secretory system Conjugative DNA transfer BSY240_2276 PF03466 LysR substrate binding domain BSY240_2276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_2277 PF00145 C-5 cytosine-specific DNA methylase BSY240_2287 PF03884 DNA gyrase inhibitor YacG BSY240_2288 PF02545 Maf-like protein BSY240_2289 PF01176 Translation initiation factor 1A / IF-1 BSY240_229 PF02630 SCO1/SenC BSY240_2290 PF01451 Low molecular weight phosphotyrosine protein phosphatase BSY240_2291 PF06793 Uncharacterised protein family (UPF0262) BSY240_2292 PF00815 Histidinol dehydrogenase BSY240_2294 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BSY240_2298 PF03466 LysR substrate binding domain BSY240_2298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_2299 PF00141 Peroxidase BSY240_2301 PF00005 ABC transporter BSY240_2302 PF13533 Biotin-lipoyl like BSY240_2303 PF01370 NAD dependent epimerase/dehydratase family BSY240_2305 PF01741 Large-conductance mechanosensitive channel, MscL BSY240_2306 PF01627 Hpt domain BSY240_2306 PF00672 HAMP domain BSY240_2306 PF00072 Response regulator receiver domain BSY240_2306 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2307 PF02887 Pyruvate kinase, alpha/beta domain BSY240_2307 PF00224 Pyruvate kinase, barrel domain BSY240_2309 PF03009 Glycerophosphoryl diester phosphodiesterase family BSY240_231 PF01321 Creatinase/Prolidase N-terminal domain BSY240_231 PF00557 Metallopeptidase family M24 BSY240_2310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSY240_2310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSY240_2310 PF00378 Enoyl-CoA hydratase/isomerase BSY240_2312 PF02803 Thiolase, C-terminal domain BSY240_2312 PF00108 Thiolase, N-terminal domain BSY240_2313 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSY240_2313 PF02770 Acyl-CoA dehydrogenase, middle domain BSY240_2313 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSY240_2313 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSY240_2315 PF01925 Sulfite exporter TauE/SafE BSY240_2318 PF08494 DEAD/H associated BSY240_2318 PF00270 DEAD/DEAH box helicase BSY240_2318 PF00271 Helicase conserved C-terminal domain BSY240_2323 PF01180 Dihydroorotate dehydrogenase BSY240_2324 PF01554 MatE BSY240_2327 PF00072 Response regulator receiver domain BSY240_2327 PF00196 Bacterial regulatory proteins, luxR family BSY240_2331 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_2333 PF03358 NADPH-dependent FMN reductase BSY240_2335 PF00692 dUTPase BSY240_2336 PF01053 Cys/Met metabolism PLP-dependent enzyme BSY240_2337 PF04379 ApaG domain BSY240_2339 PF01430 Hsp33 protein BSY240_2340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BSY240_2340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BSY240_2341 PF00202 Aminotransferase class-III BSY240_2343 PF00486 Transcriptional regulatory protein, C terminal BSY240_2343 PF00072 Response regulator receiver domain BSY240_2344 PF01895 PhoU domain BSY240_2345 PF00005 ABC transporter BSY240_2346 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2347 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2349 PF16736 Single Cache-like BSY240_2349 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2349 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2349 PF00989 PAS fold BSY240_235 PF02548 Ketopantoate hydroxymethyltransferase BSY240_2350 PF03976 Polyphosphate kinase 2 (PPK2) BSY240_2356 PF13193 AMP-binding enzyme C-terminal domain BSY240_2356 PF00501 AMP-binding enzyme BSY240_2357 PF00342 Phosphoglucose isomerase BSY240_2359 PF00294 pfkB family carbohydrate kinase BSY240_236 PF02569 Pantoate-beta-alanine ligase BSY240_2360 PF00156 Phosphoribosyl transferase domain BSY240_2362 PF01979 Amidohydrolase family BSY240_2363 PF00072 Response regulator receiver domain BSY240_2364 PF00672 HAMP domain BSY240_2364 PF01627 Hpt domain BSY240_2364 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2364 PF00072 Response regulator receiver domain BSY240_2364 PF17149 Periplasmic sensor domain found in signal transduction proteins BSY240_2366 PF00072 Response regulator receiver domain BSY240_2368 PF00005 ABC transporter BSY240_2369 PF02653 Branched-chain amino acid transport system / permease component BSY240_237 PF00857 Isochorismatase family BSY240_2370 PF13407 Periplasmic binding protein domain BSY240_2373 PF00027 Cyclic nucleotide-binding domain BSY240_2373 PF13545 Crp-like helix-turn-helix domain BSY240_2374 PF05544 Proline racemase BSY240_2376 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2376 PF00672 HAMP domain BSY240_2376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2376 PF13426 PAS domain BSY240_2377 PF00825 Ribonuclease P BSY240_2378 PF14849 YidC periplasmic domain BSY240_2378 PF02096 60Kd inner membrane protein BSY240_238 PF01011 PQQ enzyme repeat BSY240_2380 PF01926 50S ribosome-binding GTPase BSY240_2381 PF02469 Fasciclin domain BSY240_2384 PF00696 Amino acid kinase family BSY240_2385 PF07690 Major Facilitator Superfamily BSY240_2390 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_2390 PF14602 Hexapeptide repeat of succinyl-transferase BSY240_2390 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BSY240_2392 PF07687 Peptidase dimerisation domain BSY240_2392 PF01546 Peptidase family M20/M25/M40 BSY240_2394 PF01416 tRNA pseudouridine synthase BSY240_2395 PF00551 Formyl transferase BSY240_2395 PF02911 Formyl transferase, C-terminal domain BSY240_2396 PF01327 Polypeptide deformylase BSY240_2398 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_24 PF08220 DeoR-like helix-turn-helix domain BSY240_24 PF00455 DeoR C terminal sensor domain BSY240_240 PF00265 Thymidine kinase BSY240_2400 PF00294 pfkB family carbohydrate kinase BSY240_2401 PF12729 Four helix bundle sensory module for signal transduction BSY240_2401 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_2401 PF00672 HAMP domain BSY240_2402 PF01156 Inosine-uridine preferring nucleoside hydrolase BSY240_2403 PF00011 Hsp20/alpha crystallin family BSY240_2405 PF02390 Putative methyltransferase BSY240_2406 PF00438 S-adenosylmethionine synthetase, N-terminal domain BSY240_2406 PF02773 S-adenosylmethionine synthetase, C-terminal domain BSY240_2406 PF02772 S-adenosylmethionine synthetase, central domain BSY240_2407 PF01381 Helix-turn-helix BSY240_2408 PF00795 Carbon-nitrogen hydrolase BSY240_2409 PF03471 Transporter associated domain BSY240_2409 PF00571 CBS domain BSY240_2410 PF02130 Uncharacterized protein family UPF0054 BSY240_2411 PF02562 PhoH-like protein BSY240_2412 PF04055 Radical SAM superfamily BSY240_2412 PF01938 TRAM domain BSY240_2412 PF00919 Uncharacterized protein family UPF0004 BSY240_2414 PF01475 Ferric uptake regulator family BSY240_2416 PF00814 Glycoprotease family BSY240_2417 PF01106 NifU-like domain BSY240_2419 PF00579 tRNA synthetases class I (W and Y) BSY240_242 PF13361 UvrD-like helicase C-terminal domain BSY240_242 PF00580 UvrD/REP helicase N-terminal domain BSY240_2420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_2421 PF03023 Lipid II flippase MurJ BSY240_2423 PF01842 ACT domain BSY240_2423 PF08335 GlnD PII-uridylyltransferase BSY240_2423 PF01966 HD domain BSY240_2424 PF05192 MutS domain III BSY240_2424 PF05188 MutS domain II BSY240_2424 PF01624 MutS domain I BSY240_2424 PF00488 MutS domain V BSY240_2424 PF05190 MutS family domain IV BSY240_2425 PF03466 LysR substrate binding domain BSY240_2425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_2426 PF01515 Phosphate acetyl/butaryl transferase BSY240_2426 PF00390 Malic enzyme, N-terminal domain BSY240_2426 PF03949 Malic enzyme, NAD binding domain BSY240_2428 PF01252 Signal peptidase (SPase) II BSY240_2429 PF00588 SpoU rRNA Methylase family BSY240_2429 PF08032 RNA 2'-O ribose methyltransferase substrate binding BSY240_2430 PF01170 Putative RNA methylase family UPF0020 BSY240_2430 PF02926 THUMP domain BSY240_2430 PF10672 S-adenosylmethionine-dependent methyltransferase BSY240_2432 PF00216 Bacterial DNA-binding protein BSY240_2434 PF03968 OstA-like protein BSY240_2435 PF00005 ABC transporter BSY240_2436 PF00309 Sigma-54 factor, Activator interacting domain (AID) BSY240_2436 PF04963 Sigma-54 factor, core binding domain BSY240_2436 PF04552 Sigma-54, DNA binding domain BSY240_2437 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BSY240_2437 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BSY240_2438 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BSY240_2439 PF01025 GrpE BSY240_244 PF00873 AcrB/AcrD/AcrF family BSY240_2440 PF01628 HrcA protein C terminal domain BSY240_2441 PF01138 3' exoribonuclease family, domain 1 BSY240_2441 PF03725 3' exoribonuclease family, domain 2 BSY240_2443 PF01725 Ham1 family BSY240_2444 PF04055 Radical SAM superfamily BSY240_2444 PF06969 HemN C-terminal domain BSY240_2445 PF13649 Methyltransferase domain BSY240_2446 PF00308 Bacterial dnaA protein BSY240_2446 PF11638 DnaA N-terminal domain BSY240_2446 PF08299 Bacterial dnaA protein helix-turn-helix BSY240_2447 PF01649 Ribosomal protein S20 BSY240_2448 PF00378 Enoyl-CoA hydratase/isomerase BSY240_2449 PF06827 Zinc finger found in FPG and IleRS BSY240_2449 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BSY240_2449 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BSY240_245 PF01565 FAD binding domain BSY240_245 PF02913 FAD linked oxidases, C-terminal domain BSY240_2450 PF01209 ubiE/COQ5 methyltransferase family BSY240_2451 PF03109 ABC1 family BSY240_2452 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2452 PF18415 Histidine kinase receptor ArcB trans-membrane domain BSY240_2452 PF00989 PAS fold BSY240_2452 PF00072 Response regulator receiver domain BSY240_2452 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2452 PF01627 Hpt domain BSY240_2453 PF00072 Response regulator receiver domain BSY240_2454 PF13581 Histidine kinase-like ATPase domain BSY240_2454 PF07568 Histidine kinase BSY240_2454 PF13426 PAS domain BSY240_2455 PF02441 Flavoprotein BSY240_2455 PF04127 DNA / pantothenate metabolism flavoprotein BSY240_2458 PF05726 Pirin C-terminal cupin domain BSY240_2458 PF02678 Pirin BSY240_2459 PF08543 Phosphomethylpyrimidine kinase BSY240_2460 PF13419 Haloacid dehalogenase-like hydrolase BSY240_2461 PF03144 Elongation factor Tu domain 2 BSY240_2461 PF00009 Elongation factor Tu GTP binding domain BSY240_2461 PF16658 Class II release factor RF3, C-terminal domain BSY240_2462 PF00692 dUTPase BSY240_2464 PF01037 Lrp/AsnC ligand binding domain BSY240_2467 PF01810 LysE type translocator BSY240_2468 PF01810 LysE type translocator BSY240_2469 PF00291 Pyridoxal-phosphate dependent enzyme BSY240_2470 PF13426 PAS domain BSY240_2470 PF07536 HWE histidine kinase BSY240_2470 PF13581 Histidine kinase-like ATPase domain BSY240_2471 PF01078 Magnesium chelatase, subunit ChlI BSY240_2471 PF13335 Magnesium chelatase, subunit ChlI C-terminal BSY240_2472 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BSY240_2472 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BSY240_2473 PF00005 ABC transporter BSY240_2474 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2475 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2476 PF13416 Bacterial extracellular solute-binding protein BSY240_2477 PF02021 Uncharacterised protein family UPF0102 BSY240_2478 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_2479 PF02767 DNA polymerase III beta subunit, central domain BSY240_2479 PF02768 DNA polymerase III beta subunit, C-terminal domain BSY240_2479 PF00712 DNA polymerase III beta subunit, N-terminal domain BSY240_2480 PF13649 Methyltransferase domain BSY240_2481 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BSY240_2485 PF02673 Bacitracin resistance protein BacA BSY240_2486 PF00043 Glutathione S-transferase, C-terminal domain BSY240_2486 PF13417 Glutathione S-transferase, N-terminal domain BSY240_2487 PF08331 Domain of unknown function (DUF1730) BSY240_2489 PF03330 Lytic transglycolase BSY240_2490 PF01029 NusB family BSY240_2490 PF01189 16S rRNA methyltransferase RsmB/F BSY240_2495 PF03073 TspO/MBR family BSY240_2498 PF00958 GMP synthase C terminal domain BSY240_2498 PF00117 Glutamine amidotransferase class-I BSY240_2498 PF02540 NAD synthase BSY240_25 PF02734 DAK2 domain BSY240_25 PF02733 Dak1 domain BSY240_250 PF00303 Thymidylate synthase BSY240_2500 PF00106 short chain dehydrogenase BSY240_2502 PF03960 ArsC family BSY240_2503 PF04073 Aminoacyl-tRNA editing domain BSY240_2504 PF02073 Thermophilic metalloprotease (M29) BSY240_2509 PF00313 'Cold-shock' DNA-binding domain BSY240_251 PF00186 Dihydrofolate reductase BSY240_2510 PF02525 Flavodoxin-like fold BSY240_2511 PF02601 Exonuclease VII, large subunit BSY240_2511 PF13742 OB-fold nucleic acid binding domain BSY240_2514 PF12697 Alpha/beta hydrolase family BSY240_2514 PF08241 Methyltransferase domain BSY240_2515 PF00892 EamA-like transporter family BSY240_2517 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_2517 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_2519 PF12833 Helix-turn-helix domain BSY240_2519 PF01965 DJ-1/PfpI family BSY240_252 PF12221 Bacterial membrane protein N terminal BSY240_252 PF01145 SPFH domain / Band 7 family BSY240_2520 PF00248 Aldo/keto reductase family BSY240_2521 PF00248 Aldo/keto reductase family BSY240_2522 PF00892 EamA-like transporter family BSY240_2524 PF01032 FecCD transport family BSY240_2525 PF00005 ABC transporter BSY240_2528 PF03193 RsgA GTPase BSY240_253 PF01145 SPFH domain / Band 7 family BSY240_2530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BSY240_2530 PF01588 Putative tRNA binding domain BSY240_2530 PF03147 Ferredoxin-fold anticodon binding domain BSY240_2530 PF03484 tRNA synthetase B5 domain BSY240_2530 PF03483 B3/4 domain BSY240_2534 PF01409 tRNA synthetases class II core domain (F) BSY240_2534 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BSY240_2535 PF00453 Ribosomal protein L20 BSY240_2536 PF01632 Ribosomal protein L35 BSY240_2537 PF00672 HAMP domain BSY240_2537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2537 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2538 PF00072 Response regulator receiver domain BSY240_2538 PF00486 Transcriptional regulatory protein, C terminal BSY240_2541 PF05198 Translation initiation factor IF-3, N-terminal domain BSY240_2541 PF00707 Translation initiation factor IF-3, C-terminal domain BSY240_2544 PF07690 Major Facilitator Superfamily BSY240_2549 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_255 PF13180 PDZ domain BSY240_2551 PF00850 Histone deacetylase domain BSY240_2556 PF00155 Aminotransferase class I and II BSY240_2557 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_2557 PF00107 Zinc-binding dehydrogenase BSY240_2558 PF13454 FAD-NAD(P)-binding BSY240_256 PF00990 Diguanylate cyclase, GGDEF domain BSY240_256 PF03707 Bacterial signalling protein N terminal repeat BSY240_256 PF13188 PAS domain BSY240_256 PF00563 EAL domain BSY240_2563 PF00795 Carbon-nitrogen hydrolase BSY240_2564 PF00679 Elongation factor G C-terminus BSY240_2564 PF00009 Elongation factor Tu GTP binding domain BSY240_2564 PF03144 Elongation factor Tu domain 2 BSY240_2564 PF06421 GTP-binding protein LepA C-terminus BSY240_2566 PF01638 HxlR-like helix-turn-helix BSY240_2569 PF07411 Domain of unknown function (DUF1508) BSY240_257 PF13302 Acetyltransferase (GNAT) domain BSY240_2582 PF00877 NlpC/P60 family BSY240_2584 PF00883 Cytosol aminopeptidase family, catalytic domain BSY240_2584 PF02789 Cytosol aminopeptidase family, N-terminal domain BSY240_2586 PF01205 Uncharacterized protein family UPF0029 BSY240_2588 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BSY240_2588 PF01580 FtsK/SpoIIIE family BSY240_2588 PF09397 Ftsk gamma domain BSY240_2588 PF17854 FtsK alpha domain BSY240_2589 PF05974 Domain of unknown function (DUF892) BSY240_2592 PF04262 Glutamate-cysteine ligase BSY240_2592 PF18419 ATP-grasp-like domain BSY240_2593 PF13537 Glutamine amidotransferase domain BSY240_2593 PF00733 Asparagine synthase BSY240_2595 PF00027 Cyclic nucleotide-binding domain BSY240_2595 PF13545 Crp-like helix-turn-helix domain BSY240_2597 PF14525 AraC-binding-like domain BSY240_2597 PF12833 Helix-turn-helix domain BSY240_2598 PF05343 M42 glutamyl aminopeptidase BSY240_2599 PF07729 FCD domain BSY240_2599 PF00392 Bacterial regulatory proteins, gntR family BSY240_26 PF00005 ABC transporter BSY240_26 PF17912 MalK OB fold domain BSY240_26 PF03459 TOBE domain BSY240_2600 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_2601 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2602 PF00005 ABC transporter BSY240_2603 PF00266 Aminotransferase class-V BSY240_2604 PF00449 Urease alpha-subunit, N-terminal domain BSY240_2604 PF01979 Amidohydrolase family BSY240_2605 PF00701 Dihydrodipicolinate synthetase family BSY240_2606 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_2608 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_2609 PF07729 FCD domain BSY240_2609 PF00392 Bacterial regulatory proteins, gntR family BSY240_261 PF00205 Thiamine pyrophosphate enzyme, central domain BSY240_261 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSY240_261 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSY240_2610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_2611 PF08501 Shikimate dehydrogenase substrate binding domain BSY240_2611 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BSY240_2612 PF17938 Tetracyclin repressor-like, C-terminal domain BSY240_2612 PF00440 Bacterial regulatory proteins, tetR family BSY240_2613 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BSY240_2613 PF02896 PEP-utilising enzyme, TIM barrel domain BSY240_2613 PF00391 PEP-utilising enzyme, mobile domain BSY240_2616 PF01625 Peptide methionine sulfoxide reductase BSY240_262 PF10369 Small subunit of acetolactate synthase BSY240_2621 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BSY240_2622 PF01048 Phosphorylase superfamily BSY240_2623 PF01791 DeoC/LacD family aldolase BSY240_2624 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BSY240_2624 PF00591 Glycosyl transferase family, a/b domain BSY240_2624 PF02885 Glycosyl transferase family, helical bundle domain BSY240_2627 PF00962 Adenosine/AMP deaminase BSY240_2628 PF01676 Metalloenzyme superfamily BSY240_263 PF01022 Bacterial regulatory protein, arsR family BSY240_2635 PF04972 BON domain BSY240_2635 PF00263 Bacterial type II and III secretion system protein BSY240_2635 PF13629 Pilus formation protein N terminal region BSY240_2638 PF00437 Type II/IV secretion system protein BSY240_264 PF00248 Aldo/keto reductase family BSY240_2643 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BSY240_2643 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BSY240_2645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSY240_2646 PF00005 ABC transporter BSY240_2646 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_2649 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2649 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_2650 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2651 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_2652 PF03411 Penicillin-insensitive murein endopeptidase BSY240_2653 PF02142 MGS-like domain BSY240_2654 PF02685 Glucokinase BSY240_2655 PF00664 ABC transporter transmembrane region BSY240_2655 PF00005 ABC transporter BSY240_2656 PF05173 Dihydrodipicolinate reductase, C-terminus BSY240_2656 PF01113 Dihydrodipicolinate reductase, N-terminus BSY240_2657 PF00300 Histidine phosphatase superfamily (branch 1) BSY240_2658 PF00561 alpha/beta hydrolase fold BSY240_2659 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BSY240_2659 PF01612 3'-5' exonuclease BSY240_2659 PF01367 5'-3' exonuclease, C-terminal SAM fold BSY240_2659 PF00476 DNA polymerase family A BSY240_266 PF02979 Nitrile hydratase, alpha chain BSY240_2662 PF04073 Aminoacyl-tRNA editing domain BSY240_2663 PF00905 Penicillin binding protein transpeptidase domain BSY240_2663 PF00912 Transglycosylase BSY240_2664 PF00012 Hsp70 protein BSY240_2666 PF00684 DnaJ central domain BSY240_2666 PF00226 DnaJ domain BSY240_2666 PF01556 DnaJ C terminal domain BSY240_2668 PF04102 SlyX BSY240_267 PF02211 Nitrile hydratase beta subunit BSY240_2671 PF02463 RecF/RecN/SMC N terminal domain BSY240_2672 PF00581 Rhodanese-like domain BSY240_2672 PF00899 ThiF family BSY240_2674 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSY240_2674 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSY240_2675 PF00294 pfkB family carbohydrate kinase BSY240_2678 PF00034 Cytochrome c BSY240_2679 PF02348 Cytidylyltransferase BSY240_2680 PF01817 Chorismate mutase type II BSY240_2680 PF00800 Prephenate dehydratase BSY240_2681 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BSY240_2681 PF00293 NUDIX domain BSY240_2681 PF09297 NADH pyrophosphatase zinc ribbon domain BSY240_2683 PF12169 DNA polymerase III subunits gamma and tau domain III BSY240_2683 PF12170 DNA polymerase III tau subunit V interacting with alpha BSY240_2683 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BSY240_2684 PF02575 YbaB/EbfC DNA-binding family BSY240_2686 PF03473 MOSC domain BSY240_2687 PF02132 RecR protein BSY240_2687 PF13662 Toprim domain BSY240_2689 PF05977 Transmembrane secretion effector BSY240_269 PF14490 Helix-hairpin-helix containing domain BSY240_269 PF13538 UvrD-like helicase C-terminal domain BSY240_269 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BSY240_2690 PF17384 RimP C-terminal SH3 domain BSY240_2690 PF02576 RimP N-terminal domain BSY240_2691 PF00575 S1 RNA binding domain BSY240_2691 PF08529 NusA N-terminal domain BSY240_2691 PF13184 NusA-like KH domain BSY240_2693 PF00009 Elongation factor Tu GTP binding domain BSY240_2693 PF03144 Elongation factor Tu domain 2 BSY240_2693 PF11987 Translation-initiation factor 2 BSY240_2693 PF08364 Bacterial translation initiation factor IF-2 associated region BSY240_2693 PF04760 Translation initiation factor IF-2, N-terminal region BSY240_2694 PF02033 Ribosome-binding factor A BSY240_2695 PF01509 TruB family pseudouridylate synthase (N terminal domain) BSY240_2695 PF16198 tRNA pseudouridylate synthase B C-terminal domain BSY240_2695 PF09157 Pseudouridine synthase II TruB, C-terminal BSY240_2696 PF00312 Ribosomal protein S15 BSY240_2697 PF03725 3' exoribonuclease family, domain 2 BSY240_2697 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BSY240_2697 PF00013 KH domain BSY240_2697 PF00575 S1 RNA binding domain BSY240_2697 PF01138 3' exoribonuclease family, domain 1 BSY240_2698 PF05175 Methyltransferase small domain BSY240_2698 PF08468 Methyltransferase small domain N-terminal BSY240_27 PF00005 ABC transporter BSY240_2700 PF00072 Response regulator receiver domain BSY240_2700 PF00196 Bacterial regulatory proteins, luxR family BSY240_2701 PF00109 Beta-ketoacyl synthase, N-terminal domain BSY240_2701 PF02801 Beta-ketoacyl synthase, C-terminal domain BSY240_2702 PF07977 FabA-like domain BSY240_2704 PF03458 UPF0126 domain BSY240_2711 PF02224 Cytidylate kinase BSY240_2712 PF00575 S1 RNA binding domain BSY240_2714 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BSY240_2717 PF00476 DNA polymerase family A BSY240_2717 PF01612 3'-5' exonuclease BSY240_2718 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSY240_2718 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSY240_2718 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSY240_2718 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSY240_2719 PF00106 short chain dehydrogenase BSY240_2723 PF04545 Sigma-70, region 4 BSY240_2723 PF04542 Sigma-70 region 2 BSY240_2724 PF12973 ChrR Cupin-like domain BSY240_2727 PF01068 ATP dependent DNA ligase domain BSY240_2727 PF04675 DNA ligase N terminus BSY240_2727 PF04679 ATP dependent DNA ligase C terminal region BSY240_2728 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSY240_2728 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSY240_273 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BSY240_2731 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2732 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2733 PF00005 ABC transporter BSY240_2734 PF03459 TOBE domain BSY240_2734 PF17912 MalK OB fold domain BSY240_2734 PF00005 ABC transporter BSY240_2735 PF01266 FAD dependent oxidoreductase BSY240_2735 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BSY240_2736 PF08220 DeoR-like helix-turn-helix domain BSY240_2736 PF00455 DeoR C terminal sensor domain BSY240_2737 PF01032 FecCD transport family BSY240_2739 PF00005 ABC transporter BSY240_274 PF01177 Asp/Glu/Hydantoin racemase BSY240_2740 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_2742 PF05067 Manganese containing catalase BSY240_2746 PF00325 Bacterial regulatory proteins, crp family BSY240_2746 PF04198 Putative sugar-binding domain BSY240_2748 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2749 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2750 PF00005 ABC transporter BSY240_2750 PF08402 TOBE domain BSY240_2752 PF01232 Mannitol dehydrogenase Rossmann domain BSY240_2752 PF08125 Mannitol dehydrogenase C-terminal domain BSY240_2753 PF13419 Haloacid dehalogenase-like hydrolase BSY240_2754 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSY240_2754 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSY240_2755 PF01979 Amidohydrolase family BSY240_2756 PF00221 Aromatic amino acid lyase BSY240_2757 PF01979 Amidohydrolase family BSY240_2758 PF00221 Aromatic amino acid lyase BSY240_276 PF01037 Lrp/AsnC ligand binding domain BSY240_2760 PF17391 Urocanase N-terminal domain BSY240_2760 PF17392 Urocanase C-terminal domain BSY240_2760 PF01175 Urocanase Rossmann-like domain BSY240_2761 PF05962 HutD BSY240_2762 PF00392 Bacterial regulatory proteins, gntR family BSY240_2762 PF07702 UTRA domain BSY240_2763 PF00873 AcrB/AcrD/AcrF family BSY240_2764 PF13533 Biotin-lipoyl like BSY240_2768 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BSY240_2769 PF00510 Cytochrome c oxidase subunit III BSY240_2770 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSY240_2771 PF06481 COX Aromatic Rich Motif BSY240_2771 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSY240_2772 PF00083 Sugar (and other) transporter BSY240_2772 PF07690 Major Facilitator Superfamily BSY240_2774 PF00440 Bacterial regulatory proteins, tetR family BSY240_2776 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2778 PF08402 TOBE domain BSY240_2778 PF00005 ABC transporter BSY240_2779 PF00753 Metallo-beta-lactamase superfamily BSY240_2780 PF00171 Aldehyde dehydrogenase family BSY240_2781 PF00701 Dihydrodipicolinate synthetase family BSY240_2782 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_2782 PF00005 ABC transporter BSY240_2784 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_2788 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BSY240_2789 PF00465 Iron-containing alcohol dehydrogenase BSY240_2790 PF07729 FCD domain BSY240_2790 PF00392 Bacterial regulatory proteins, gntR family BSY240_2792 PF07729 FCD domain BSY240_2792 PF00392 Bacterial regulatory proteins, gntR family BSY240_2793 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_2795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_2796 PF00107 Zinc-binding dehydrogenase BSY240_2796 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_2797 PF03786 D-mannonate dehydratase (UxuA) BSY240_2798 PF01232 Mannitol dehydrogenase Rossmann domain BSY240_2798 PF08125 Mannitol dehydrogenase C-terminal domain BSY240_2799 PF00596 Class II Aldolase and Adducin N-terminal domain BSY240_2800 PF07005 Sugar-binding N-terminal domain BSY240_2800 PF17042 Nucleotide-binding C-terminal domain BSY240_2801 PF00356 Bacterial regulatory proteins, lacI family BSY240_2801 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BSY240_2802 PF13407 Periplasmic binding protein domain BSY240_2803 PF00005 ABC transporter BSY240_2804 PF02653 Branched-chain amino acid transport system / permease component BSY240_2805 PF02653 Branched-chain amino acid transport system / permease component BSY240_2806 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSY240_2806 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSY240_2807 PF01261 Xylose isomerase-like TIM barrel BSY240_2815 PF02423 Ornithine cyclodeaminase/mu-crystallin family BSY240_2816 PF00271 Helicase conserved C-terminal domain BSY240_2816 PF04408 Helicase associated domain (HA2) BSY240_2816 PF00270 DEAD/DEAH box helicase BSY240_2816 PF08482 ATP-dependent helicase C-terminal BSY240_2817 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2817 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2818 PF00072 Response regulator receiver domain BSY240_2820 PF17969 L,D-transpeptidase C-terminal domain BSY240_2820 PF03734 L,D-transpeptidase catalytic domain BSY240_2821 PF01274 Malate synthase BSY240_2822 PF05378 Hydantoinase/oxoprolinase N-terminal region BSY240_2822 PF01968 Hydantoinase/oxoprolinase BSY240_2823 PF00067 Cytochrome P450 BSY240_2825 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_2825 PF10431 C-terminal, D2-small domain, of ClpB protein BSY240_2825 PF07724 AAA domain (Cdc48 subfamily) BSY240_2826 PF00227 Proteasome subunit BSY240_2827 PF00475 Imidazoleglycerol-phosphate dehydratase BSY240_2828 PF00117 Glutamine amidotransferase class-I BSY240_2829 PF00977 Histidine biosynthesis protein BSY240_283 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BSY240_283 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BSY240_2830 PF00977 Histidine biosynthesis protein BSY240_2831 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BSY240_2832 PF00485 Phosphoribulokinase / Uridine kinase family BSY240_2833 PF13532 2OG-Fe(II) oxygenase superfamily BSY240_2834 PF00472 RF-1 domain BSY240_2835 PF01293 Phosphoenolpyruvate carboxykinase BSY240_2836 PF00072 Response regulator receiver domain BSY240_2836 PF00486 Transcriptional regulatory protein, C terminal BSY240_2837 PF13755 Sensor N-terminal transmembrane domain BSY240_2837 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2837 PF13756 Stimulus-sensing domain BSY240_2837 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2837 PF00672 HAMP domain BSY240_2839 PF03830 PTS system sorbose subfamily IIB component BSY240_2839 PF03610 PTS system fructose IIA component BSY240_284 PF00563 EAL domain BSY240_284 PF00990 Diguanylate cyclase, GGDEF domain BSY240_284 PF00360 Phytochrome region BSY240_284 PF01590 GAF domain BSY240_2840 PF00381 PTS HPr component phosphorylation site BSY240_2841 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BSY240_2841 PF05221 S-adenosyl-L-homocysteine hydrolase BSY240_2842 PF00512 His Kinase A (phospho-acceptor) domain BSY240_2842 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2843 PF01636 Phosphotransferase enzyme family BSY240_2844 PF12804 MobA-like NTP transferase domain BSY240_2846 PF12705 PD-(D/E)XK nuclease superfamily BSY240_2846 PF00580 UvrD/REP helicase N-terminal domain BSY240_2846 PF13361 UvrD-like helicase C-terminal domain BSY240_2847 PF00085 Thioredoxin BSY240_2848 PF02875 Mur ligase family, glutamate ligase domain BSY240_2848 PF08245 Mur ligase middle domain BSY240_2849 PF01039 Carboxyl transferase domain BSY240_285 PF00155 Aminotransferase class I and II BSY240_2850 PF00290 Tryptophan synthase alpha chain BSY240_2851 PF00291 Pyridoxal-phosphate dependent enzyme BSY240_2852 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BSY240_2857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_2857 PF01751 Toprim domain BSY240_2857 PF00204 DNA gyrase B BSY240_2857 PF00986 DNA gyrase B subunit, carboxyl terminus BSY240_2862 PF04186 FxsA cytoplasmic membrane protein BSY240_2863 PF02556 Preprotein translocase subunit SecB BSY240_2864 PF00929 Exonuclease BSY240_2865 PF01121 Dephospho-CoA kinase BSY240_2866 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BSY240_2866 PF01488 Shikimate / quinate 5-dehydrogenase BSY240_2866 PF08501 Shikimate dehydrogenase substrate binding domain BSY240_2867 PF02545 Maf-like protein BSY240_2868 PF03618 Kinase/pyrophosphorylase BSY240_2869 PF01208 Uroporphyrinogen decarboxylase (URO-D) BSY240_2871 PF07498 Rho termination factor, N-terminal domain BSY240_2871 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSY240_2871 PF07497 Rho termination factor, RNA-binding domain BSY240_2872 PF12631 MnmE helical domain BSY240_2872 PF10396 GTP-binding protein TrmE N-terminus BSY240_2872 PF01926 50S ribosome-binding GTPase BSY240_2873 PF01134 Glucose inhibited division protein A BSY240_2873 PF13932 GidA associated domain BSY240_2874 PF02527 rRNA small subunit methyltransferase G BSY240_2875 PF13614 AAA domain BSY240_2877 PF17762 HTH domain found in ParB protein BSY240_2877 PF02195 ParB-like nuclease domain BSY240_2879 PF13603 Leucyl-tRNA synthetase, Domain 2 BSY240_2879 PF08264 Anticodon-binding domain of tRNA BSY240_2879 PF00133 tRNA synthetases class I (I, L, M and V) BSY240_288 PF02567 Phenazine biosynthesis-like protein BSY240_2880 PF01168 Alanine racemase, N-terminal domain BSY240_2881 PF16177 Acetyl-coenzyme A synthetase N-terminus BSY240_2881 PF00501 AMP-binding enzyme BSY240_2881 PF13193 AMP-binding enzyme C-terminal domain BSY240_2883 PF00501 AMP-binding enzyme BSY240_2883 PF16177 Acetyl-coenzyme A synthetase N-terminus BSY240_2883 PF13193 AMP-binding enzyme C-terminal domain BSY240_2886 PF01435 Peptidase family M48 BSY240_2887 PF01189 16S rRNA methyltransferase RsmB/F BSY240_2887 PF01029 NusB family BSY240_2889 PF01808 AICARFT/IMPCHase bienzyme BSY240_2889 PF02142 MGS-like domain BSY240_2890 PF11700 Vacuole effluxer Atg22 like BSY240_2891 PF05088 Bacterial NAD-glutamate dehydrogenase BSY240_2892 PF08543 Phosphomethylpyrimidine kinase BSY240_2893 PF00484 Carbonic anhydrase BSY240_2895 PF02774 Semialdehyde dehydrogenase, dimerisation domain BSY240_2895 PF01118 Semialdehyde dehydrogenase, NAD binding domain BSY240_2898 PF03466 LysR substrate binding domain BSY240_2898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_2899 PF13407 Periplasmic binding protein domain BSY240_29 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_290 PF00005 ABC transporter BSY240_2900 PF00005 ABC transporter BSY240_2901 PF02653 Branched-chain amino acid transport system / permease component BSY240_2903 PF00920 Dehydratase family BSY240_2904 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_2905 PF00171 Aldehyde dehydrogenase family BSY240_2906 PF05035 2-keto-3-deoxy-galactonokinase BSY240_2907 PF01081 KDPG and KHG aldolase BSY240_2909 PF00694 Aconitase C-terminal domain BSY240_2909 PF00330 Aconitase family (aconitate hydratase) BSY240_291 PF01032 FecCD transport family BSY240_2910 PF00005 ABC transporter BSY240_2911 PF03379 CcmB protein BSY240_2912 PF01578 Cytochrome C assembly protein BSY240_2914 PF08534 Redoxin BSY240_2915 PF10755 Protein of unknown function (DUF2585) BSY240_2916 PF04279 Intracellular septation protein A BSY240_2917 PF02881 SRP54-type protein, helical bundle domain BSY240_2917 PF00448 SRP54-type protein, GTPase domain BSY240_2918 PF00919 Uncharacterized protein family UPF0004 BSY240_2918 PF04055 Radical SAM superfamily BSY240_2919 PF01678 Diaminopimelate epimerase BSY240_292 PF01497 Periplasmic binding protein BSY240_2920 PF02581 Thiamine monophosphate synthase BSY240_2921 PF05690 Thiazole biosynthesis protein ThiG BSY240_2923 PF01266 FAD dependent oxidoreductase BSY240_2924 PF13667 ThiC-associated domain BSY240_2924 PF01964 Radical SAM ThiC family BSY240_2925 PF12706 Beta-lactamase superfamily domain BSY240_2926 PF02881 SRP54-type protein, helical bundle domain BSY240_2926 PF00448 SRP54-type protein, GTPase domain BSY240_2926 PF02978 Signal peptide binding domain BSY240_2927 PF01817 Chorismate mutase type II BSY240_2927 PF02153 Prephenate dehydrogenase BSY240_2928 PF00886 Ribosomal protein S16 BSY240_2929 PF01782 RimM N-terminal domain BSY240_2929 PF05239 PRC-barrel domain BSY240_2931 PF01746 tRNA (Guanine-1)-methyltransferase BSY240_2932 PF01245 Ribosomal protein L19 BSY240_2934 PF00330 Aconitase family (aconitate hydratase) BSY240_2935 PF03976 Polyphosphate kinase 2 (PPK2) BSY240_2936 PF05686 Glycosyl transferase family 90 BSY240_2937 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2938 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_2940 PF00248 Aldo/keto reductase family BSY240_2942 PF00072 Response regulator receiver domain BSY240_2942 PF00486 Transcriptional regulatory protein, C terminal BSY240_2945 PF03548 Outer membrane lipoprotein carrier protein LolA BSY240_2946 PF17854 FtsK alpha domain BSY240_2946 PF09397 Ftsk gamma domain BSY240_2946 PF01580 FtsK/SpoIIIE family BSY240_2946 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BSY240_2947 PF00909 Ammonium Transporter Family BSY240_2948 PF00543 Nitrogen regulatory protein P-II BSY240_295 PF12794 Mechanosensitive ion channel inner membrane domain 1 BSY240_295 PF00924 Mechanosensitive ion channel BSY240_295 PF12795 Mechanosensitive ion channel porin domain BSY240_2950 PF01494 FAD binding domain BSY240_2951 PF03966 Trm112p-like protein BSY240_2953 PF00085 Thioredoxin BSY240_2958 PF04204 Homoserine O-succinyltransferase BSY240_2960 PF03328 HpcH/HpaI aldolase/citrate lyase family BSY240_2962 PF00694 Aconitase C-terminal domain BSY240_2963 PF00291 Pyridoxal-phosphate dependent enzyme BSY240_2964 PF00180 Isocitrate/isopropylmalate dehydrogenase BSY240_2965 PF04542 Sigma-70 region 2 BSY240_2965 PF04545 Sigma-70, region 4 BSY240_2965 PF00140 Sigma-70 factor, region 1.2 BSY240_2968 PF01435 Peptidase family M48 BSY240_2969 PF00005 ABC transporter BSY240_2970 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_2971 PF01547 Bacterial extracellular solute-binding protein BSY240_2977 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_2977 PF07724 AAA domain (Cdc48 subfamily) BSY240_2977 PF17871 AAA lid domain BSY240_2977 PF02861 Clp amino terminal domain, pathogenicity island component BSY240_2977 PF10431 C-terminal, D2-small domain, of ClpB protein BSY240_2978 PF00210 Ferritin-like domain BSY240_298 PF00072 Response regulator receiver domain BSY240_298 PF00990 Diguanylate cyclase, GGDEF domain BSY240_2980 PF07733 Bacterial DNA polymerase III alpha NTPase domain BSY240_2980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BSY240_2980 PF14579 Helix-hairpin-helix motif BSY240_2980 PF02811 PHP domain BSY240_2980 PF01336 OB-fold nucleic acid binding domain BSY240_2981 PF01336 OB-fold nucleic acid binding domain BSY240_2981 PF02811 PHP domain BSY240_2981 PF14579 Helix-hairpin-helix motif BSY240_2981 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BSY240_2981 PF07733 Bacterial DNA polymerase III alpha NTPase domain BSY240_2986 PF01965 DJ-1/PfpI family BSY240_2987 PF00581 Rhodanese-like domain BSY240_2988 PF00293 NUDIX domain BSY240_299 PF00005 ABC transporter BSY240_2990 PF13180 PDZ domain BSY240_2990 PF03572 Peptidase family S41 BSY240_2992 PF02590 Predicted SPOUT methyltransferase BSY240_2994 PF01467 Cytidylyltransferase-like BSY240_2995 PF00171 Aldehyde dehydrogenase family BSY240_2996 PF00696 Amino acid kinase family BSY240_2996 PF01472 PUA domain BSY240_2997 PF01018 GTP1/OBG BSY240_2997 PF01926 50S ribosome-binding GTPase BSY240_3 PF00392 Bacterial regulatory proteins, gntR family BSY240_3 PF07729 FCD domain BSY240_300 PF01061 ABC-2 type transporter BSY240_3000 PF13302 Acetyltransferase (GNAT) domain BSY240_3001 PF01016 Ribosomal L27 protein BSY240_3002 PF00829 Ribosomal prokaryotic L21 protein BSY240_3005 PF07969 Amidohydrolase family BSY240_3006 PF06299 Protein of unknown function (DUF1045) BSY240_3007 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3008 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3009 PF00512 His Kinase A (phospho-acceptor) domain BSY240_3009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3010 PF00005 ABC transporter BSY240_3012 PF00005 ABC transporter BSY240_3013 PF00005 ABC transporter BSY240_3014 PF06007 Phosphonate metabolism protein PhnJ BSY240_3015 PF05861 Bacterial phosphonate metabolism protein (PhnI) BSY240_3016 PF05845 Bacterial phosphonate metabolism protein (PhnH) BSY240_3017 PF06754 Phosphonate metabolism protein PhnG BSY240_3018 PF00392 Bacterial regulatory proteins, gntR family BSY240_3018 PF07702 UTRA domain BSY240_3020 PF00689 Cation transporting ATPase, C-terminus BSY240_3020 PF00690 Cation transporter/ATPase, N-terminus BSY240_3022 PF00958 GMP synthase C terminal domain BSY240_3022 PF00117 Glutamine amidotransferase class-I BSY240_3022 PF02540 NAD synthase BSY240_3023 PF03466 LysR substrate binding domain BSY240_3023 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3024 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_3025 PF01738 Dienelactone hydrolase family BSY240_3026 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_3026 PF00107 Zinc-binding dehydrogenase BSY240_3027 PF02653 Branched-chain amino acid transport system / permease component BSY240_3028 PF00005 ABC transporter BSY240_3029 PF13407 Periplasmic binding protein domain BSY240_303 PF02654 Cobalamin-5-phosphate synthase BSY240_3030 PF05025 RbsD / FucU transport protein family BSY240_3031 PF00248 Aldo/keto reductase family BSY240_3032 PF08666 SAF domain BSY240_3032 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BSY240_3033 PF07729 FCD domain BSY240_3033 PF00392 Bacterial regulatory proteins, gntR family BSY240_3034 PF08125 Mannitol dehydrogenase C-terminal domain BSY240_3034 PF01232 Mannitol dehydrogenase Rossmann domain BSY240_3036 PF01547 Bacterial extracellular solute-binding protein BSY240_3037 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3038 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3039 PF16875 Glycosyl hydrolase family 36 N-terminal domain BSY240_3039 PF16874 Glycosyl hydrolase family 36 C-terminal domain BSY240_304 PF02277 Phosphoribosyltransferase BSY240_3040 PF00005 ABC transporter BSY240_3040 PF17912 MalK OB fold domain BSY240_3041 PF08532 Beta-galactosidase trimerisation domain BSY240_3041 PF08533 Beta-galactosidase C-terminal domain BSY240_3041 PF02449 Beta-galactosidase BSY240_3045 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BSY240_3046 PF00664 ABC transporter transmembrane region BSY240_3046 PF00005 ABC transporter BSY240_3048 PF02785 Biotin carboxylase C-terminal domain BSY240_3048 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_3048 PF02436 Conserved carboxylase domain BSY240_3048 PF00289 Biotin carboxylase, N-terminal domain BSY240_3048 PF00682 HMGL-like BSY240_3048 PF00364 Biotin-requiring enzyme BSY240_3049 PF10091 Putative glucoamylase BSY240_3049 PF06165 Glycosyltransferase family 36 BSY240_3049 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BSY240_305 PF00512 His Kinase A (phospho-acceptor) domain BSY240_305 PF00989 PAS fold BSY240_305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3050 PF00440 Bacterial regulatory proteins, tetR family BSY240_3050 PF13977 BetI-type transcriptional repressor, C-terminal BSY240_3051 PF00892 EamA-like transporter family BSY240_3052 PF01546 Peptidase family M20/M25/M40 BSY240_3052 PF07687 Peptidase dimerisation domain BSY240_3053 PF07690 Major Facilitator Superfamily BSY240_3054 PF04551 GcpE protein BSY240_3055 PF13488 Glycine zipper BSY240_3055 PF00691 OmpA family BSY240_3057 PF00155 Aminotransferase class I and II BSY240_3058 PF00348 Polyprenyl synthetase BSY240_3059 PF00912 Transglycosylase BSY240_306 PF01219 Prokaryotic diacylglycerol kinase BSY240_3061 PF01783 Ribosomal L32p protein family BSY240_3063 PF05233 PHB accumulation regulatory domain BSY240_3063 PF07879 PHB/PHA accumulation regulator DNA-binding domain BSY240_3064 PF02803 Thiolase, C-terminal domain BSY240_3064 PF00108 Thiolase, N-terminal domain BSY240_3071 PF11953 Domain of unknown function (DUF3470) BSY240_3071 PF00037 4Fe-4S binding domain BSY240_3072 PF02559 CarD-like/TRCF domain BSY240_3073 PF01027 Inhibitor of apoptosis-promoting Bax1 BSY240_3075 PF00005 ABC transporter BSY240_3076 PF13472 GDSL-like Lipase/Acylhydrolase family BSY240_3077 PF01451 Low molecular weight phosphotyrosine protein phosphatase BSY240_3078 PF02834 LigT like Phosphoesterase BSY240_3079 PF01329 Pterin 4 alpha carbinolamine dehydratase BSY240_308 PF03167 Uracil DNA glycosylase superfamily BSY240_3082 PF04055 Radical SAM superfamily BSY240_3083 PF01810 LysE type translocator BSY240_3085 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BSY240_3086 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BSY240_3087 PF00764 Arginosuccinate synthase BSY240_3088 PF07690 Major Facilitator Superfamily BSY240_309 PF13404 AsnC-type helix-turn-helix domain BSY240_309 PF01037 Lrp/AsnC ligand binding domain BSY240_3090 PF01432 Peptidase family M3 BSY240_3094 PF00719 Inorganic pyrophosphatase BSY240_3095 PF02594 Uncharacterised ACR, YggU family COG1872 BSY240_3096 PF02325 YGGT family BSY240_3097 PF00117 Glutamine amidotransferase class-I BSY240_3103 PF03900 Porphobilinogen deaminase, C-terminal domain BSY240_3103 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BSY240_3104 PF00814 Glycoprotease family BSY240_3105 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BSY240_3105 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BSY240_311 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSY240_311 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSY240_3110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BSY240_3112 PF00890 FAD binding domain BSY240_3112 PF02910 Fumarate reductase flavoprotein C-term BSY240_3113 PF13237 4Fe-4S dicluster domain BSY240_3113 PF13085 2Fe-2S iron-sulfur cluster binding domain BSY240_3114 PF02974 Protease inhibitor Inh BSY240_3115 PF03969 AFG1-like ATPase BSY240_3116 PF00056 lactate/malate dehydrogenase, NAD binding domain BSY240_3116 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BSY240_3117 PF00549 CoA-ligase BSY240_3117 PF08442 ATP-grasp domain BSY240_3118 PF00549 CoA-ligase BSY240_3118 PF02629 CoA binding domain BSY240_3119 PF00676 Dehydrogenase E1 component BSY240_3119 PF16078 2-oxoglutarate dehydrogenase N-terminus BSY240_3119 PF16870 2-oxoglutarate dehydrogenase C-terminal BSY240_3119 PF02779 Transketolase, pyrimidine binding domain BSY240_3120 PF00364 Biotin-requiring enzyme BSY240_3120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSY240_3120 PF02817 e3 binding domain BSY240_3124 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3124 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSY240_3128 PF00589 Phage integrase family BSY240_3128 PF02899 Phage integrase, N-terminal SAM-like domain BSY240_3130 PF00270 DEAD/DEAH box helicase BSY240_3130 PF17764 3′ DNA-binding domain (3′BD) BSY240_3130 PF18074 Primosomal protein N C-terminal domain BSY240_3130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BSY240_3132 PF00213 ATP synthase delta (OSCP) subunit BSY240_3133 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSY240_3133 PF02874 ATP synthase alpha/beta family, beta-barrel domain BSY240_3133 PF00306 ATP synthase alpha/beta chain, C terminal domain BSY240_3134 PF00231 ATP synthase BSY240_3135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSY240_3135 PF02874 ATP synthase alpha/beta family, beta-barrel domain BSY240_3136 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BSY240_3137 PF00732 GMC oxidoreductase BSY240_3137 PF05199 GMC oxidoreductase BSY240_3138 PF13378 Enolase C-terminal domain-like BSY240_3138 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSY240_3139 PF00171 Aldehyde dehydrogenase family BSY240_3140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3140 PF03466 LysR substrate binding domain BSY240_3141 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BSY240_3141 PF00056 lactate/malate dehydrogenase, NAD binding domain BSY240_3143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3143 PF03466 LysR substrate binding domain BSY240_3145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BSY240_3145 PF00037 4Fe-4S binding domain BSY240_3145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BSY240_3146 PF12838 4Fe-4S dicluster domain BSY240_3146 PF00384 Molybdopterin oxidoreductase BSY240_3146 PF01568 Molydopterin dinucleotide binding domain BSY240_3146 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSY240_3146 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSY240_3147 PF02634 FdhD/NarQ family BSY240_3149 PF00710 Asparaginase, N-terminal BSY240_3149 PF17763 Glutaminase/Asparaginase C-terminal domain BSY240_315 PF06233 Usg-like family BSY240_3150 PF01584 CheW-like domain BSY240_3151 PF13426 PAS domain BSY240_3151 PF08447 PAS fold BSY240_3151 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_3152 PF00491 Arginase family BSY240_3155 PF01103 Surface antigen BSY240_3155 PF07244 Surface antigen variable number repeat BSY240_3155 PF17243 POTRA domain TamA domain 1 BSY240_3157 PF01799 [2Fe-2S] binding domain BSY240_3157 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_3158 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSY240_3158 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSY240_3159 PF00941 FAD binding domain in molybdopterin dehydrogenase BSY240_3159 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSY240_316 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3160 PF00155 Aminotransferase class I and II BSY240_3161 PF01965 DJ-1/PfpI family BSY240_3162 PF06906 Protein of unknown function (DUF1272) BSY240_3163 PF13288 DXP reductoisomerase C-terminal domain BSY240_3163 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BSY240_3163 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BSY240_3164 PF00403 Heavy-metal-associated domain BSY240_3166 PF05974 Domain of unknown function (DUF892) BSY240_3168 PF08281 Sigma-70, region 4 BSY240_3168 PF04542 Sigma-70 region 2 BSY240_317 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3174 PF07687 Peptidase dimerisation domain BSY240_3174 PF01546 Peptidase family M20/M25/M40 BSY240_3175 PF07943 Penicillin-binding protein 5, C-terminal domain BSY240_3175 PF00768 D-alanyl-D-alanine carboxypeptidase BSY240_3176 PF01206 Sulfurtransferase TusA BSY240_3176 PF00581 Rhodanese-like domain BSY240_3177 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSY240_3177 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSY240_3178 PF03734 L,D-transpeptidase catalytic domain BSY240_3179 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BSY240_318 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_3180 PF02899 Phage integrase, N-terminal SAM-like domain BSY240_3180 PF00589 Phage integrase family BSY240_3182 PF01202 Shikimate kinase BSY240_3183 PF01761 3-dehydroquinate synthase BSY240_3184 PF00571 CBS domain BSY240_3184 PF03471 Transporter associated domain BSY240_3184 PF01595 Cyclin M transmembrane N-terminal domain BSY240_3185 PF01722 BolA-like protein BSY240_3186 PF00226 DnaJ domain BSY240_3187 PF07728 AAA domain (dynein-related subfamily) BSY240_3187 PF12556 Cobaltochelatase CobS subunit N terminal BSY240_3187 PF08406 CbbQ/NirQ/NorQ C-terminal BSY240_3188 PF06213 Cobalamin biosynthesis protein CobT BSY240_3188 PF11775 Cobalamin biosynthesis protein CobT VWA domain BSY240_319 PF00691 OmpA family BSY240_3190 PF02592 Putative vitamin uptake transporter BSY240_3191 PF00830 Ribosomal L28 family BSY240_3196 PF16123 Hydroxyacylglutathione hydrolase C-terminus BSY240_3196 PF00753 Metallo-beta-lactamase superfamily BSY240_3197 PF01209 ubiE/COQ5 methyltransferase family BSY240_3198 PF00155 Aminotransferase class I and II BSY240_3199 PF02153 Prephenate dehydrogenase BSY240_32 PF00356 Bacterial regulatory proteins, lacI family BSY240_320 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BSY240_3201 PF04752 ChaC-like protein BSY240_3205 PF00005 ABC transporter BSY240_3208 PF00072 Response regulator receiver domain BSY240_321 PF12804 MobA-like NTP transferase domain BSY240_3210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BSY240_3210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BSY240_3212 PF00206 Lyase BSY240_3212 PF14698 Argininosuccinate lyase C-terminal BSY240_3213 PF08534 Redoxin BSY240_3214 PF12792 CSS motif domain associated with EAL BSY240_3214 PF00563 EAL domain BSY240_3215 PF00005 ABC transporter BSY240_3216 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3217 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3219 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSY240_3219 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSY240_322 PF07690 Major Facilitator Superfamily BSY240_3220 PF01012 Electron transfer flavoprotein domain BSY240_3220 PF00766 Electron transfer flavoprotein FAD-binding domain BSY240_3221 PF01012 Electron transfer flavoprotein domain BSY240_3223 PF01923 Cobalamin adenosyltransferase BSY240_3225 PF00106 short chain dehydrogenase BSY240_3226 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSY240_3231 PF09335 SNARE associated Golgi protein BSY240_3234 PF13193 AMP-binding enzyme C-terminal domain BSY240_3234 PF00501 AMP-binding enzyme BSY240_3237 PF01757 Acyltransferase family BSY240_3238 PF07517 SecA DEAD-like domain BSY240_3238 PF02810 SEC-C motif BSY240_3238 PF07516 SecA Wing and Scaffold domain BSY240_3238 PF01043 SecA preprotein cross-linking domain BSY240_3239 PF00639 PPIC-type PPIASE domain BSY240_3240 PF01960 ArgJ family BSY240_3242 PF00293 NUDIX domain BSY240_3245 PF08241 Methyltransferase domain BSY240_3247 PF00462 Glutaredoxin BSY240_3248 PF00795 Carbon-nitrogen hydrolase BSY240_325 PF04055 Radical SAM superfamily BSY240_325 PF06463 Molybdenum Cofactor Synthesis C BSY240_3251 PF08241 Methyltransferase domain BSY240_3253 PF03706 Lysylphosphatidylglycerol synthase TM region BSY240_3253 PF09924 Uncharacterised conserved protein (DUF2156) BSY240_3254 PF13840 ACT domain BSY240_3254 PF00696 Amino acid kinase family BSY240_3254 PF01842 ACT domain BSY240_3255 PF02896 PEP-utilising enzyme, TIM barrel domain BSY240_3255 PF00391 PEP-utilising enzyme, mobile domain BSY240_3255 PF05524 PEP-utilising enzyme, N-terminal BSY240_3255 PF01590 GAF domain BSY240_3256 PF00472 RF-1 domain BSY240_3256 PF03462 PCRF domain BSY240_3257 PF05175 Methyltransferase small domain BSY240_3257 PF17827 PrmC N-terminal domain BSY240_3259 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_3259 PF17871 AAA lid domain BSY240_3259 PF07724 AAA domain (Cdc48 subfamily) BSY240_3259 PF02861 Clp amino terminal domain, pathogenicity island component BSY240_3259 PF10431 C-terminal, D2-small domain, of ClpB protein BSY240_326 PF01047 MarR family BSY240_3260 PF01464 Transglycosylase SLT domain BSY240_3260 PF10145 Phage-related minor tail protein BSY240_3260 PF01551 Peptidase family M23 BSY240_3268 PF12697 Alpha/beta hydrolase family BSY240_3269 PF02796 Helix-turn-helix domain of resolvase BSY240_3269 PF00239 Resolvase, N terminal domain BSY240_3270 PF17841 BID domain of Bartonella effector protein (Bep) BSY240_3270 PF03389 MobA/MobL family BSY240_3270 PF01443 Viral (Superfamily 1) RNA helicase BSY240_3271 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3271 PF00005 ABC transporter BSY240_3272 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3272 PF00005 ABC transporter BSY240_3273 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3273 PF00005 ABC transporter BSY240_3274 PF01037 Lrp/AsnC ligand binding domain BSY240_3275 PF00202 Aminotransferase class-III BSY240_3276 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_3277 PF13276 HTH-like domain BSY240_3277 PF00665 Integrase core domain BSY240_3277 PF13333 Integrase core domain BSY240_3279 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3280 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3281 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_3281 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3282 PF01979 Amidohydrolase family BSY240_3283 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3283 PF00005 ABC transporter BSY240_3284 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3284 PF00005 ABC transporter BSY240_3286 PF03841 L-seryl-tRNA selenium transferase BSY240_3287 PF09339 IclR helix-turn-helix domain BSY240_3287 PF01614 Bacterial transcriptional regulator BSY240_3289 PF00480 ROK family BSY240_3290 PF07687 Peptidase dimerisation domain BSY240_3290 PF01546 Peptidase family M20/M25/M40 BSY240_3292 PF02653 Branched-chain amino acid transport system / permease component BSY240_3294 PF00005 ABC transporter BSY240_3297 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3297 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_3298 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3299 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_33 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_330 PF17158 Membrane-associated sensor, integral membrane domain BSY240_330 PF00990 Diguanylate cyclase, GGDEF domain BSY240_3301 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3301 PF00005 ABC transporter BSY240_3302 PF00072 Response regulator receiver domain BSY240_3302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3302 PF13426 PAS domain BSY240_3304 PF05974 Domain of unknown function (DUF892) BSY240_3305 PF06628 Catalase-related immune-responsive BSY240_3305 PF18011 C-terminal domain found in long catalases BSY240_3305 PF00199 Catalase BSY240_3306 PF13426 PAS domain BSY240_3306 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3306 PF00072 Response regulator receiver domain BSY240_3307 PF13426 PAS domain BSY240_3307 PF07568 Histidine kinase BSY240_3307 PF13581 Histidine kinase-like ATPase domain BSY240_3308 PF08447 PAS fold BSY240_3308 PF07536 HWE histidine kinase BSY240_3308 PF13426 PAS domain BSY240_331 PF05683 Fumarase C-terminus BSY240_331 PF05681 Fumarate hydratase (Fumerase) BSY240_3311 PF10503 Esterase PHB depolymerase BSY240_3312 PF13188 PAS domain BSY240_3312 PF00563 EAL domain BSY240_3312 PF00990 Diguanylate cyclase, GGDEF domain BSY240_3312 PF03707 Bacterial signalling protein N terminal repeat BSY240_3313 PF00005 ABC transporter BSY240_3315 PF07715 TonB-dependent Receptor Plug Domain BSY240_3315 PF00593 TonB dependent receptor BSY240_3316 PF00005 ABC transporter BSY240_3316 PF06472 ABC transporter transmembrane region 2 BSY240_3319 PF00529 HlyD membrane-fusion protein of T1SS BSY240_3321 PF00664 ABC transporter transmembrane region BSY240_3321 PF00005 ABC transporter BSY240_3324 PF00196 Bacterial regulatory proteins, luxR family BSY240_3324 PF00072 Response regulator receiver domain BSY240_3325 PF00005 ABC transporter BSY240_3327 PF01032 FecCD transport family BSY240_3328 PF01799 [2Fe-2S] binding domain BSY240_3328 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_3329 PF00941 FAD binding domain in molybdopterin dehydrogenase BSY240_3329 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSY240_333 PF00206 Lyase BSY240_333 PF10415 Fumarase C C-terminus BSY240_3330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSY240_3330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSY240_3331 PF05161 MOFRL family BSY240_3331 PF13660 Domain of unknown function (DUF4147) BSY240_3332 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3333 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3334 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3334 PF00005 ABC transporter BSY240_3335 PF00005 ABC transporter BSY240_3335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3337 PF03600 Citrate transporter BSY240_3337 PF02080 TrkA-C domain BSY240_3338 PF01235 Sodium:alanine symporter family BSY240_3340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3343 PF00356 Bacterial regulatory proteins, lacI family BSY240_3346 PF13193 AMP-binding enzyme C-terminal domain BSY240_3346 PF00668 Condensation domain BSY240_3346 PF00550 Phosphopantetheine attachment site BSY240_3346 PF00975 Thioesterase domain BSY240_3346 PF00501 AMP-binding enzyme BSY240_335 PF13419 Haloacid dehalogenase-like hydrolase BSY240_3350 PF13416 Bacterial extracellular solute-binding protein BSY240_3351 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3352 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3353 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BSY240_3353 PF00703 Glycosyl hydrolases family 2 BSY240_3353 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BSY240_3354 PF00005 ABC transporter BSY240_3354 PF17912 MalK OB fold domain BSY240_3355 PF01042 Endoribonuclease L-PSP BSY240_3356 PF02525 Flavodoxin-like fold BSY240_3358 PF07969 Amidohydrolase family BSY240_3359 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_336 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BSY240_3360 PF00005 ABC transporter BSY240_3362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3362 PF03466 LysR substrate binding domain BSY240_3363 PF02633 Creatinine amidohydrolase BSY240_3366 PF00474 Sodium:solute symporter family BSY240_3367 PF00571 CBS domain BSY240_3369 PF00929 Exonuclease BSY240_3372 PF01970 Tripartite tricarboxylate transporter TctA family BSY240_3375 PF07886 BA14K-like protein BSY240_3376 PF00920 Dehydratase family BSY240_3377 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSY240_3377 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSY240_3378 PF01370 NAD dependent epimerase/dehydratase family BSY240_3379 PF02913 FAD linked oxidases, C-terminal domain BSY240_3379 PF01565 FAD binding domain BSY240_338 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_338 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSY240_3380 PF00392 Bacterial regulatory proteins, gntR family BSY240_3380 PF07729 FCD domain BSY240_3382 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSY240_3383 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_3384 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_3385 PF00892 EamA-like transporter family BSY240_3387 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSY240_3387 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSY240_3388 PF05336 L-rhamnose mutarotase BSY240_3389 PF02653 Branched-chain amino acid transport system / permease component BSY240_3390 PF02653 Branched-chain amino acid transport system / permease component BSY240_3391 PF00005 ABC transporter BSY240_3392 PF13407 Periplasmic binding protein domain BSY240_3393 PF08220 DeoR-like helix-turn-helix domain BSY240_3393 PF00455 DeoR C terminal sensor domain BSY240_3394 PF00596 Class II Aldolase and Adducin N-terminal domain BSY240_3395 PF01679 Proteolipid membrane potential modulator BSY240_3396 PF01261 Xylose isomerase-like TIM barrel BSY240_3397 PF01027 Inhibitor of apoptosis-promoting Bax1 BSY240_3399 PF08281 Sigma-70, region 4 BSY240_3399 PF04542 Sigma-70 region 2 BSY240_34 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3400 PF06055 Exopolysaccharide synthesis, ExoD BSY240_3408 PF00905 Penicillin binding protein transpeptidase domain BSY240_3408 PF00912 Transglycosylase BSY240_3408 PF06832 Penicillin-Binding Protein C-terminus Family BSY240_3409 PF07678 A-macroglobulin TED domain BSY240_3409 PF01835 MG2 domain BSY240_3409 PF00207 Alpha-2-macroglobulin family BSY240_3409 PF17962 Bacterial macroglobulin domain 6 BSY240_3409 PF07703 Alpha-2-macroglobulin bait region domain BSY240_3409 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BSY240_3409 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BSY240_3409 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BSY240_3409 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BSY240_341 PF01474 Class-II DAHP synthetase family BSY240_3410 PF03466 LysR substrate binding domain BSY240_3410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3411 PF02770 Acyl-CoA dehydrogenase, middle domain BSY240_3411 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSY240_3411 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSY240_3413 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSY240_3413 PF00128 Alpha amylase, catalytic domain BSY240_3416 PF02308 MgtC family BSY240_3419 PF00677 Lumazine binding domain BSY240_3420 PF00294 pfkB family carbohydrate kinase BSY240_3421 PF01618 MotA/TolQ/ExbB proton channel family BSY240_3422 PF02472 Biopolymer transport protein ExbD/TolR BSY240_3425 PF00171 Aldehyde dehydrogenase family BSY240_3426 PF01266 FAD dependent oxidoreductase BSY240_3427 PF03466 LysR substrate binding domain BSY240_3427 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3429 PF00202 Aminotransferase class-III BSY240_3430 PF00551 Formyl transferase BSY240_3431 PF00150 Cellulase (glycosyl hydrolase family 5) BSY240_3438 PF01040 UbiA prenyltransferase family BSY240_3439 PF01565 FAD binding domain BSY240_3439 PF04030 D-arabinono-1,4-lactone oxidase BSY240_344 PF00884 Sulfatase BSY240_3442 PF00202 Aminotransferase class-III BSY240_3444 PF04055 Radical SAM superfamily BSY240_3444 PF12544 Lysine-2,3-aminomutase BSY240_3445 PF00152 tRNA synthetases class II (D, K and N) BSY240_3446 PF08207 Elongation factor P (EF-P) KOW-like domain BSY240_3446 PF09285 Elongation factor P, C-terminal BSY240_3446 PF01132 Elongation factor P (EF-P) OB domain BSY240_3448 PF03466 LysR substrate binding domain BSY240_3448 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3449 PF00171 Aldehyde dehydrogenase family BSY240_345 PF02540 NAD synthase BSY240_345 PF00795 Carbon-nitrogen hydrolase BSY240_3450 PF00202 Aminotransferase class-III BSY240_3452 PF02321 Outer membrane efflux protein BSY240_3453 PF00873 AcrB/AcrD/AcrF family BSY240_3454 PF00529 HlyD membrane-fusion protein of T1SS BSY240_3454 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSY240_3455 PF00440 Bacterial regulatory proteins, tetR family BSY240_3456 PF01259 SAICAR synthetase BSY240_3465 PF01554 MatE BSY240_3466 PF00892 EamA-like transporter family BSY240_3467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3467 PF03466 LysR substrate binding domain BSY240_3468 PF00296 Luciferase-like monooxygenase BSY240_3469 PF00296 Luciferase-like monooxygenase BSY240_347 PF07676 WD40-like Beta Propeller Repeat BSY240_3470 PF01613 Flavin reductase like domain BSY240_3471 PF00925 GTP cyclohydrolase II BSY240_3471 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BSY240_3472 PF00296 Luciferase-like monooxygenase BSY240_3473 PF01613 Flavin reductase like domain BSY240_3475 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_3476 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_3477 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3478 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3479 PF00005 ABC transporter BSY240_3480 PF05899 Protein of unknown function (DUF861) BSY240_3480 PF07883 Cupin domain BSY240_3482 PF13700 Domain of unknown function (DUF4158) BSY240_3482 PF01526 Tn3 transposase DDE domain BSY240_3486 PF03552 Cellulose synthase BSY240_3486 PF00535 Glycosyl transferase family 2 BSY240_3486 PF07238 PilZ domain BSY240_3489 PF00440 Bacterial regulatory proteins, tetR family BSY240_3489 PF08359 YsiA-like protein, C-terminal region BSY240_349 PF00881 Nitroreductase family BSY240_3492 PF00005 ABC transporter BSY240_3492 PF12704 MacB-like periplasmic core domain BSY240_3492 PF02687 FtsX-like permease family BSY240_3494 PF14525 AraC-binding-like domain BSY240_3494 PF12833 Helix-turn-helix domain BSY240_3495 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSY240_3496 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_3496 PF01799 [2Fe-2S] binding domain BSY240_3498 PF08241 Methyltransferase domain BSY240_3499 PF01925 Sulfite exporter TauE/SafE BSY240_35 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_350 PF00765 Autoinducer synthase BSY240_3500 PF04273 Putative phosphatase (DUF442) BSY240_3500 PF00753 Metallo-beta-lactamase superfamily BSY240_3501 PF13098 Thioredoxin-like domain BSY240_3502 PF08521 Two-component sensor kinase N-terminal BSY240_3502 PF00512 His Kinase A (phospho-acceptor) domain BSY240_3502 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3503 PF00072 Response regulator receiver domain BSY240_3503 PF00486 Transcriptional regulatory protein, C terminal BSY240_3504 PF02683 Cytochrome C biogenesis protein transmembrane region BSY240_3504 PF11412 Disulphide bond corrector protein DsbC BSY240_3505 PF00578 AhpC/TSA family BSY240_3506 PF17969 L,D-transpeptidase C-terminal domain BSY240_3506 PF03734 L,D-transpeptidase catalytic domain BSY240_3506 PF01476 LysM domain BSY240_3507 PF06965 Na+/H+ antiporter 1 BSY240_3507 PF13462 Thioredoxin BSY240_3511 PF02683 Cytochrome C biogenesis protein transmembrane region BSY240_3517 PF00149 Calcineurin-like phosphoesterase BSY240_3517 PF02872 5'-nucleotidase, C-terminal domain BSY240_3518 PF00174 Oxidoreductase molybdopterin binding domain BSY240_3519 PF00034 Cytochrome c BSY240_352 PF00390 Malic enzyme, N-terminal domain BSY240_352 PF03949 Malic enzyme, NAD binding domain BSY240_352 PF01515 Phosphate acetyl/butaryl transferase BSY240_3520 PF00034 Cytochrome c BSY240_3521 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding BSY240_3521 PF10518 TAT (twin-arginine translocation) pathway signal sequence BSY240_3521 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3522 PF04143 Sulphur transport BSY240_3524 PF00512 His Kinase A (phospho-acceptor) domain BSY240_3524 PF00672 HAMP domain BSY240_3524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3525 PF00072 Response regulator receiver domain BSY240_3525 PF00486 Transcriptional regulatory protein, C terminal BSY240_3527 PF03992 Antibiotic biosynthesis monooxygenase BSY240_3529 PF00701 Dihydrodipicolinate synthetase family BSY240_3530 PF01979 Amidohydrolase family BSY240_3531 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3532 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3532 PF00005 ABC transporter BSY240_3533 PF00005 ABC transporter BSY240_3533 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3534 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3534 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_3535 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3536 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3538 PF01979 Amidohydrolase family BSY240_3539 PF01177 Asp/Glu/Hydantoin racemase BSY240_354 PF02405 Permease MlaE BSY240_3540 PF07729 FCD domain BSY240_3540 PF00392 Bacterial regulatory proteins, gntR family BSY240_3541 PF13282 Domain of unknown function (DUF4070) BSY240_3541 PF04055 Radical SAM superfamily BSY240_3541 PF02310 B12 binding domain BSY240_3545 PF03412 Peptidase C39 family BSY240_3545 PF00664 ABC transporter transmembrane region BSY240_3545 PF00005 ABC transporter BSY240_3546 PF00664 ABC transporter transmembrane region BSY240_3546 PF03412 Peptidase C39 family BSY240_3546 PF00005 ABC transporter BSY240_3548 PF17850 CysA C-terminal regulatory domain BSY240_3548 PF00005 ABC transporter BSY240_3548 PF12857 TOBE-like domain BSY240_3549 PF03412 Peptidase C39 family BSY240_3549 PF00005 ABC transporter BSY240_3549 PF00664 ABC transporter transmembrane region BSY240_355 PF00005 ABC transporter BSY240_3554 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3556 PF08402 TOBE domain BSY240_3556 PF00005 ABC transporter BSY240_3557 PF03328 HpcH/HpaI aldolase/citrate lyase family BSY240_3558 PF01575 MaoC like domain BSY240_3559 PF02785 Biotin carboxylase C-terminal domain BSY240_3559 PF00289 Biotin carboxylase, N-terminal domain BSY240_3559 PF00364 Biotin-requiring enzyme BSY240_3559 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_3560 PF01039 Carboxyl transferase domain BSY240_3561 PF02770 Acyl-CoA dehydrogenase, middle domain BSY240_3561 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSY240_3561 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSY240_3562 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSY240_3562 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3563 PF00364 Biotin-requiring enzyme BSY240_3563 PF02817 e3 binding domain BSY240_3563 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSY240_3564 PF02780 Transketolase, C-terminal domain BSY240_3564 PF02779 Transketolase, pyrimidine binding domain BSY240_3565 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal BSY240_3565 PF00676 Dehydrogenase E1 component BSY240_3566 PF12833 Helix-turn-helix domain BSY240_3567 PF00106 short chain dehydrogenase BSY240_3568 PF02803 Thiolase, C-terminal domain BSY240_3568 PF00108 Thiolase, N-terminal domain BSY240_3569 PF02770 Acyl-CoA dehydrogenase, middle domain BSY240_3569 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSY240_3569 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSY240_3570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSY240_3570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSY240_3571 PF00005 ABC transporter BSY240_3572 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3572 PF00005 ABC transporter BSY240_3573 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3574 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3576 PF01402 Ribbon-helix-helix protein, copG family BSY240_3576 PF08753 NikR C terminal nickel binding domain BSY240_3577 PF02515 CoA-transferase family III BSY240_3579 PF00775 Dioxygenase BSY240_3579 PF04444 Catechol dioxygenase N terminus BSY240_3580 PF01614 Bacterial transcriptional regulator BSY240_3580 PF09339 IclR helix-turn-helix domain BSY240_3581 PF07969 Amidohydrolase family BSY240_3582 PF04444 Catechol dioxygenase N terminus BSY240_3582 PF00775 Dioxygenase BSY240_3584 PF02653 Branched-chain amino acid transport system / permease component BSY240_3584 PF11862 Domain of unknown function (DUF3382) BSY240_3585 PF02653 Branched-chain amino acid transport system / permease component BSY240_3586 PF00005 ABC transporter BSY240_3587 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSY240_3587 PF00005 ABC transporter BSY240_3589 PF00465 Iron-containing alcohol dehydrogenase BSY240_3590 PF00775 Dioxygenase BSY240_3590 PF04444 Catechol dioxygenase N terminus BSY240_3591 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3591 PF03466 LysR substrate binding domain BSY240_3595 PF03466 LysR substrate binding domain BSY240_3595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3596 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSY240_3596 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3597 PF01066 CDP-alcohol phosphatidyltransferase BSY240_360 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_3600 PF13416 Bacterial extracellular solute-binding protein BSY240_3601 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3602 PF00005 ABC transporter BSY240_3603 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3605 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3607 PF17912 MalK OB fold domain BSY240_3607 PF00005 ABC transporter BSY240_3608 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BSY240_3609 PF01022 Bacterial regulatory protein, arsR family BSY240_3610 PF00355 Rieske [2Fe-2S] domain BSY240_3611 PF00392 Bacterial regulatory proteins, gntR family BSY240_3611 PF07729 FCD domain BSY240_3612 PF00175 Oxidoreductase NAD-binding domain BSY240_3612 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_3613 PF00356 Bacterial regulatory proteins, lacI family BSY240_3614 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3614 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3616 PF13416 Bacterial extracellular solute-binding protein BSY240_3618 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3619 PF00005 ABC transporter BSY240_3619 PF08402 TOBE domain BSY240_362 PF00809 Pterin binding enzyme BSY240_3620 PF00120 Glutamine synthetase, catalytic domain BSY240_3621 PF01645 Conserved region in glutamate synthase BSY240_3622 PF01493 GXGXG motif BSY240_3624 PF01381 Helix-turn-helix BSY240_3625 PF03601 Conserved hypothetical protein 698 BSY240_3626 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_3627 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_3629 PF01613 Flavin reductase like domain BSY240_363 PF02152 Dihydroneopterin aldolase BSY240_3630 PF00248 Aldo/keto reductase family BSY240_3631 PF00296 Luciferase-like monooxygenase BSY240_3633 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3633 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3634 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSY240_3634 PF00128 Alpha amylase, catalytic domain BSY240_3636 PF02780 Transketolase, C-terminal domain BSY240_3636 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BSY240_3636 PF02779 Transketolase, pyrimidine binding domain BSY240_3637 PF00034 Cytochrome c BSY240_3639 PF03073 TspO/MBR family BSY240_364 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BSY240_3641 PF03209 PUCC protein BSY240_3642 PF01040 UbiA prenyltransferase family BSY240_3643 PF13188 PAS domain BSY240_3643 PF13426 PAS domain BSY240_3643 PF02954 Bacterial regulatory protein, Fis family BSY240_3645 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) BSY240_3646 PF00148 Nitrogenase component 1 type Oxidoreductase BSY240_3647 PF08369 Proto-chlorophyllide reductase 57 kD subunit BSY240_3647 PF00148 Nitrogenase component 1 type Oxidoreductase BSY240_3648 PF11965 Domain of unknown function (DUF3479) BSY240_3648 PF02514 CobN/Magnesium Chelatase BSY240_3649 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family BSY240_3650 PF05175 Methyltransferase small domain BSY240_3650 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus BSY240_3651 PF03209 PUCC protein BSY240_3652 PF05239 PRC-barrel domain BSY240_3652 PF03967 Photosynthetic reaction centre, H-chain N-terminal region BSY240_3653 PF03703 Bacterial PH domain BSY240_3656 PF02915 Rubrerythrin BSY240_3658 PF00155 Aminotransferase class I and II BSY240_3659 PF00293 NUDIX domain BSY240_366 PF05128 Domain of unknown function (DUF697) BSY240_3660 PF02276 Photosynthetic reaction centre cytochrome C subunit BSY240_3661 PF00124 Photosynthetic reaction centre protein BSY240_3662 PF00124 Photosynthetic reaction centre protein BSY240_3663 PF00556 Antenna complex alpha/beta subunit BSY240_3664 PF00556 Antenna complex alpha/beta subunit BSY240_3666 PF08369 Proto-chlorophyllide reductase 57 kD subunit BSY240_3666 PF00148 Nitrogenase component 1 type Oxidoreductase BSY240_3667 PF00148 Nitrogenase component 1 type Oxidoreductase BSY240_3668 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family BSY240_3669 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_367 PF04317 YcjX-like family, DUF463 BSY240_3670 PF00891 O-methyltransferase domain BSY240_3670 PF16864 Dimerisation domain BSY240_3671 PF00348 Polyprenyl synthetase BSY240_3672 PF01593 Flavin containing amine oxidoreductase BSY240_3676 PF01593 Flavin containing amine oxidoreductase BSY240_3677 PF00561 alpha/beta hydrolase fold BSY240_3678 PF17863 AAA lid domain BSY240_3679 PF01078 Magnesium chelatase, subunit ChlI BSY240_3679 PF17863 AAA lid domain BSY240_3680 PF00873 AcrB/AcrD/AcrF family BSY240_3681 PF13533 Biotin-lipoyl like BSY240_3686 PF01584 CheW-like domain BSY240_3687 PF07015 VirC1 protein BSY240_3688 PF13407 Periplasmic binding protein domain BSY240_3689 PF00005 ABC transporter BSY240_369 PF01258 Prokaryotic dksA/traR C4-type zinc finger BSY240_3690 PF02653 Branched-chain amino acid transport system / permease component BSY240_3691 PF02653 Branched-chain amino acid transport system / permease component BSY240_3692 PF07729 FCD domain BSY240_3692 PF00392 Bacterial regulatory proteins, gntR family BSY240_3694 PF00005 ABC transporter BSY240_3694 PF08402 TOBE domain BSY240_3696 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3697 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3698 PF01177 Asp/Glu/Hydantoin racemase BSY240_37 PF00005 ABC transporter BSY240_3701 PF00480 ROK family BSY240_3702 PF01979 Amidohydrolase family BSY240_3703 PF01380 SIS domain BSY240_3705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3706 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3707 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3708 PF01547 Bacterial extracellular solute-binding protein BSY240_3709 PF08402 TOBE domain BSY240_3709 PF00005 ABC transporter BSY240_371 PF00072 Response regulator receiver domain BSY240_371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_371 PF00512 His Kinase A (phospho-acceptor) domain BSY240_371 PF08448 PAS fold BSY240_371 PF13188 PAS domain BSY240_3711 PF14031 Putative serine dehydratase domain BSY240_3711 PF01168 Alanine racemase, N-terminal domain BSY240_3712 PF07171 MlrC C-terminus BSY240_3712 PF07364 Metallopeptidase family M81 BSY240_3715 PF01380 SIS domain BSY240_3715 PF01418 Helix-turn-helix domain, rpiR family BSY240_3717 PF02838 Glycosyl hydrolase family 20, domain 2 BSY240_3717 PF00728 Glycosyl hydrolase family 20, catalytic domain BSY240_372 PF04227 Indigoidine synthase A like protein BSY240_3720 PF03932 CutC family BSY240_3721 PF00563 EAL domain BSY240_3721 PF00990 Diguanylate cyclase, GGDEF domain BSY240_3721 PF03707 Bacterial signalling protein N terminal repeat BSY240_3721 PF13188 PAS domain BSY240_3723 PF00108 Thiolase, N-terminal domain BSY240_3723 PF02803 Thiolase, C-terminal domain BSY240_3724 PF01144 Coenzyme A transferase BSY240_3725 PF01144 Coenzyme A transferase BSY240_3726 PF09339 IclR helix-turn-helix domain BSY240_3726 PF01614 Bacterial transcriptional regulator BSY240_3727 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3727 PF03466 LysR substrate binding domain BSY240_3728 PF12697 Alpha/beta hydrolase family BSY240_3729 PF02627 Carboxymuconolactone decarboxylase family BSY240_3730 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BSY240_3730 PF00775 Dioxygenase BSY240_3731 PF00775 Dioxygenase BSY240_3732 PF10397 Adenylosuccinate lyase C-terminus BSY240_3732 PF00206 Lyase BSY240_3734 PF08281 Sigma-70, region 4 BSY240_3734 PF04542 Sigma-70 region 2 BSY240_3737 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3737 PF03466 LysR substrate binding domain BSY240_3738 PF00361 Proton-conducting membrane transporter BSY240_3738 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSY240_3739 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BSY240_374 PF00154 recA bacterial DNA recombination protein BSY240_3740 PF07470 Glycosyl Hydrolase Family 88 BSY240_3741 PF00295 Glycosyl hydrolases family 28 BSY240_3743 PF03459 TOBE domain BSY240_3743 PF17912 MalK OB fold domain BSY240_3743 PF00005 ABC transporter BSY240_3744 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3745 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3746 PF11975 Family 4 glycosyl hydrolase C-terminal domain BSY240_3746 PF02056 Family 4 glycosyl hydrolase BSY240_3747 PF12833 Helix-turn-helix domain BSY240_3747 PF02311 AraC-like ligand binding domain BSY240_3748 PF04962 KduI/IolB family BSY240_3749 PF00672 HAMP domain BSY240_3749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_375 PF02272 DHHA1 domain BSY240_375 PF01411 tRNA synthetases class II (A) BSY240_375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSY240_3750 PF02743 Cache domain BSY240_3750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3750 PF00512 His Kinase A (phospho-acceptor) domain BSY240_3751 PF00158 Sigma-54 interaction domain BSY240_3751 PF00072 Response regulator receiver domain BSY240_3751 PF02954 Bacterial regulatory protein, Fis family BSY240_3755 PF00512 His Kinase A (phospho-acceptor) domain BSY240_3755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_3756 PF00486 Transcriptional regulatory protein, C terminal BSY240_3756 PF00072 Response regulator receiver domain BSY240_3758 PF00563 EAL domain BSY240_3758 PF04940 Sensors of blue-light using FAD BSY240_3759 PF00128 Alpha amylase, catalytic domain BSY240_376 PF05230 MASE2 domain BSY240_376 PF00990 Diguanylate cyclase, GGDEF domain BSY240_3762 PF00356 Bacterial regulatory proteins, lacI family BSY240_3764 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3764 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3768 PF00294 pfkB family carbohydrate kinase BSY240_3769 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSY240_3769 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSY240_3769 PF00205 Thiamine pyrophosphate enzyme, central domain BSY240_377 PF01740 STAS domain BSY240_377 PF00916 Sulfate permease family BSY240_3770 PF01261 Xylose isomerase-like TIM barrel BSY240_3772 PF04962 KduI/IolB family BSY240_3774 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3774 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSY240_3776 PF03466 LysR substrate binding domain BSY240_3776 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3777 PF00491 Arginase family BSY240_3780 PF01850 PIN domain BSY240_3781 PF08402 TOBE domain BSY240_3781 PF00005 ABC transporter BSY240_3782 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3784 PF00732 GMC oxidoreductase BSY240_3784 PF05199 GMC oxidoreductase BSY240_3786 PF00289 Biotin carboxylase, N-terminal domain BSY240_3786 PF00364 Biotin-requiring enzyme BSY240_3786 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_3786 PF02785 Biotin carboxylase C-terminal domain BSY240_3789 PF02798 Glutathione S-transferase, N-terminal domain BSY240_379 PF00180 Isocitrate/isopropylmalate dehydrogenase BSY240_3790 PF01039 Carboxyl transferase domain BSY240_3791 PF06114 IrrE N-terminal-like domain BSY240_3791 PF09856 Predicted transcriptional regulator (DUF2083) BSY240_3791 PF01381 Helix-turn-helix BSY240_3794 PF00378 Enoyl-CoA hydratase/isomerase BSY240_3795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSY240_3795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSY240_3797 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_3797 PF00355 Rieske [2Fe-2S] domain BSY240_3800 PF05532 CsbD-like BSY240_3803 PF00072 Response regulator receiver domain BSY240_3804 PF13426 PAS domain BSY240_3804 PF08447 PAS fold BSY240_3804 PF07536 HWE histidine kinase BSY240_3805 PF10005 zinc-ribbon domain BSY240_3805 PF15887 Putative zinc-binding metallo-peptidase BSY240_3811 PF04542 Sigma-70 region 2 BSY240_3811 PF08281 Sigma-70, region 4 BSY240_3812 PF00027 Cyclic nucleotide-binding domain BSY240_3812 PF13545 Crp-like helix-turn-helix domain BSY240_3814 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BSY240_3814 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BSY240_3814 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BSY240_3815 PF02233 NAD(P) transhydrogenase beta subunit BSY240_3816 PF13505 Outer membrane protein beta-barrel domain BSY240_3817 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSY240_382 PF00588 SpoU rRNA Methylase family BSY240_3822 PF07969 Amidohydrolase family BSY240_3823 PF01979 Amidohydrolase family BSY240_3824 PF00144 Beta-lactamase BSY240_3825 PF13416 Bacterial extracellular solute-binding protein BSY240_3826 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3827 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3828 PF00005 ABC transporter BSY240_3828 PF08402 TOBE domain BSY240_3829 PF01425 Amidase BSY240_383 PF01177 Asp/Glu/Hydantoin racemase BSY240_3830 PF01244 Membrane dipeptidase (Peptidase family M19) BSY240_3831 PF07969 Amidohydrolase family BSY240_3832 PF00871 Acetokinase family BSY240_3833 PF01515 Phosphate acetyl/butaryl transferase BSY240_3834 PF03576 Peptidase family S58 BSY240_3835 PF01569 PAP2 superfamily BSY240_3836 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_3836 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3837 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3838 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3839 PF07687 Peptidase dimerisation domain BSY240_3839 PF01546 Peptidase family M20/M25/M40 BSY240_384 PF00571 CBS domain BSY240_384 PF03471 Transporter associated domain BSY240_384 PF01595 Cyclin M transmembrane N-terminal domain BSY240_3840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_3840 PF00005 ABC transporter BSY240_3842 PF00795 Carbon-nitrogen hydrolase BSY240_3844 PF00633 Helix-hairpin-helix motif BSY240_3844 PF10576 Iron-sulfur binding domain of endonuclease III BSY240_3844 PF00730 HhH-GPD superfamily base excision DNA repair protein BSY240_3846 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BSY240_3846 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BSY240_3849 PF04198 Putative sugar-binding domain BSY240_3849 PF13936 Helix-turn-helix domain BSY240_3850 PF00923 Transaldolase/Fructose-6-phosphate aldolase BSY240_3854 PF00171 Aldehyde dehydrogenase family BSY240_3855 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3856 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3857 PF00005 ABC transporter BSY240_3857 PF08402 TOBE domain BSY240_3858 PF13416 Bacterial extracellular solute-binding protein BSY240_3859 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3859 PF03466 LysR substrate binding domain BSY240_386 PF07690 Major Facilitator Superfamily BSY240_3860 PF00892 EamA-like transporter family BSY240_3861 PF02374 Anion-transporting ATPase BSY240_3862 PF00950 ABC 3 transport family BSY240_3863 PF00950 ABC 3 transport family BSY240_3864 PF00005 ABC transporter BSY240_3865 PF01297 Zinc-uptake complex component A periplasmic BSY240_3868 PF03466 LysR substrate binding domain BSY240_3868 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3870 PF01336 OB-fold nucleic acid binding domain BSY240_3870 PF00152 tRNA synthetases class II (D, K and N) BSY240_3871 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSY240_3872 PF03600 Citrate transporter BSY240_3872 PF02080 TrkA-C domain BSY240_3873 PF03741 Integral membrane protein TerC family BSY240_3873 PF03471 Transporter associated domain BSY240_3874 PF00440 Bacterial regulatory proteins, tetR family BSY240_3874 PF17922 Tetracyclin repressor-like, C-terminal domain BSY240_3875 PF13533 Biotin-lipoyl like BSY240_3876 PF07690 Major Facilitator Superfamily BSY240_3877 PF00356 Bacterial regulatory proteins, lacI family BSY240_3878 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSY240_3878 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSY240_3879 PF01261 Xylose isomerase-like TIM barrel BSY240_388 PF07687 Peptidase dimerisation domain BSY240_388 PF01546 Peptidase family M20/M25/M40 BSY240_3880 PF01272 Transcription elongation factor, GreA/GreB, C-term BSY240_3880 PF03449 Transcription elongation factor, N-terminal BSY240_3882 PF00356 Bacterial regulatory proteins, lacI family BSY240_3883 PF00005 ABC transporter BSY240_3884 PF02653 Branched-chain amino acid transport system / permease component BSY240_3885 PF13407 Periplasmic binding protein domain BSY240_3887 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_3888 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_3888 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_3889 PF00232 Glycosyl hydrolase family 1 BSY240_389 PF07943 Penicillin-binding protein 5, C-terminal domain BSY240_389 PF00768 D-alanyl-D-alanine carboxypeptidase BSY240_3890 PF01638 HxlR-like helix-turn-helix BSY240_3891 PF00881 Nitroreductase family BSY240_3892 PF08447 PAS fold BSY240_3892 PF00563 EAL domain BSY240_3892 PF08448 PAS fold BSY240_3892 PF00990 Diguanylate cyclase, GGDEF domain BSY240_3895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_3896 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3897 PF12911 N-terminal TM domain of oligopeptide transport permease C BSY240_3897 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_3899 PF00005 ABC transporter BSY240_3899 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_39 PF00005 ABC transporter BSY240_390 PF01479 S4 domain BSY240_390 PF00163 Ribosomal protein S4/S9 N-terminal domain BSY240_3901 PF01081 KDPG and KHG aldolase BSY240_3905 PF03824 High-affinity nickel-transport protein BSY240_3907 PF03466 LysR substrate binding domain BSY240_3907 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_3908 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BSY240_3908 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BSY240_391 PF04960 Glutaminase BSY240_3910 PF03922 OmpW family BSY240_3911 PF00691 OmpA family BSY240_3911 PF01389 OmpA-like transmembrane domain BSY240_3912 PF02203 Tar ligand binding domain homologue BSY240_3912 PF00672 HAMP domain BSY240_3912 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_3915 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSY240_3915 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSY240_3917 PF02633 Creatinine amidohydrolase BSY240_3918 PF01047 MarR family BSY240_3919 PF00356 Bacterial regulatory proteins, lacI family BSY240_392 PF01171 PP-loop family BSY240_3920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSY240_3920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSY240_3922 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_3923 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_3925 PF00990 Diguanylate cyclase, GGDEF domain BSY240_3925 PF00563 EAL domain BSY240_3925 PF08448 PAS fold BSY240_3925 PF08447 PAS fold BSY240_3929 PF01165 Ribosomal protein S21 BSY240_393 PF00459 Inositol monophosphatase family BSY240_3930 PF01266 FAD dependent oxidoreductase BSY240_3932 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_3932 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3932 PF17806 Sarcosine oxidase A3 domain BSY240_3932 PF01571 Aminomethyltransferase folate-binding domain BSY240_3934 PF11455 Protein of unknown function (DUF3018) BSY240_3935 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BSY240_3937 PF01575 MaoC like domain BSY240_3938 PF00128 Alpha amylase, catalytic domain BSY240_3938 PF18390 Glycogen debranching enzyme C-terminal domain BSY240_3938 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSY240_3939 PF03358 NADPH-dependent FMN reductase BSY240_3940 PF03960 ArsC family BSY240_3941 PF00230 Major intrinsic protein BSY240_3943 PF01022 Bacterial regulatory protein, arsR family BSY240_3944 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSY240_3944 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSY240_3944 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSY240_3944 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSY240_3945 PF00534 Glycosyl transferases group 1 BSY240_3945 PF08323 Starch synthase catalytic domain BSY240_3946 PF00483 Nucleotidyl transferase BSY240_3947 PF00128 Alpha amylase, catalytic domain BSY240_3947 PF02806 Alpha amylase, C-terminal all-beta domain BSY240_3947 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSY240_3948 PF00343 Carbohydrate phosphorylase BSY240_395 PF04191 Phospholipid methyltransferase BSY240_3950 PF01841 Transglutaminase-like superfamily BSY240_3950 PF08379 Bacterial transglutaminase-like N-terminal region BSY240_3951 PF04168 A predicted alpha-helical domain with a conserved ER motif. BSY240_3951 PF14403 Circularly permuted ATP-grasp type 2 BSY240_3953 PF01050 Mannose-6-phosphate isomerase BSY240_3953 PF00483 Nucleotidyl transferase BSY240_3954 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSY240_3957 PF00072 Response regulator receiver domain BSY240_3959 PF00459 Inositol monophosphatase family BSY240_3961 PF00011 Hsp20/alpha crystallin family BSY240_3964 PF05114 Protein of unknown function (DUF692) BSY240_3966 PF01212 Beta-eliminating lyase BSY240_3967 PF01645 Conserved region in glutamate synthase BSY240_3967 PF01493 GXGXG motif BSY240_3967 PF00310 Glutamine amidotransferases class-II BSY240_3967 PF04898 Glutamate synthase central domain BSY240_3969 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_3969 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BSY240_397 PF00459 Inositol monophosphatase family BSY240_3971 PF13406 Transglycosylase SLT domain BSY240_3972 PF00483 Nucleotidyl transferase BSY240_3974 PF00571 CBS domain BSY240_3974 PF01380 SIS domain BSY240_3975 PF01402 Ribbon-helix-helix protein, copG family BSY240_3977 PF16200 C-terminal region of band_7 BSY240_3977 PF01145 SPFH domain / Band 7 family BSY240_3978 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_3978 PF00672 HAMP domain BSY240_398 PF07690 Major Facilitator Superfamily BSY240_3980 PF00762 Ferrochelatase BSY240_3981 PF02872 5'-nucleotidase, C-terminal domain BSY240_3981 PF00149 Calcineurin-like phosphoesterase BSY240_3983 PF16653 Saccharopine dehydrogenase C-terminal domain BSY240_3983 PF03435 Saccharopine dehydrogenase NADP binding domain BSY240_3989 PF00117 Glutamine amidotransferase class-I BSY240_3989 PF00425 chorismate binding enzyme BSY240_3989 PF04715 Anthranilate synthase component I, N terminal region BSY240_399 PF00462 Glutaredoxin BSY240_3991 PF00072 Response regulator receiver domain BSY240_3991 PF02954 Bacterial regulatory protein, Fis family BSY240_3991 PF00158 Sigma-54 interaction domain BSY240_3993 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) BSY240_3997 PF02887 Pyruvate kinase, alpha/beta domain BSY240_3997 PF00224 Pyruvate kinase, barrel domain BSY240_3998 PF00561 alpha/beta hydrolase fold BSY240_4 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4 PF03466 LysR substrate binding domain BSY240_40 PF00005 ABC transporter BSY240_4002 PF00444 Ribosomal protein L36 BSY240_4003 PF02222 ATP-grasp domain BSY240_4003 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BSY240_4004 PF00731 AIR carboxylase BSY240_4007 PF01022 Bacterial regulatory protein, arsR family BSY240_4011 PF13194 Domain of unknown function (DUF4010) BSY240_4012 PF00459 Inositol monophosphatase family BSY240_4014 PF00691 OmpA family BSY240_4014 PF01389 OmpA-like transmembrane domain BSY240_4015 PF00890 FAD binding domain BSY240_4016 PF00005 ABC transporter BSY240_4016 PF00664 ABC transporter transmembrane region BSY240_4017 PF01197 Ribosomal protein L31 BSY240_4024 PF02567 Phenazine biosynthesis-like protein BSY240_4025 PF00274 Fructose-bisphosphate aldolase class-I BSY240_4026 PF00162 Phosphoglycerate kinase BSY240_4027 PF03471 Transporter associated domain BSY240_4027 PF00999 Sodium/hydrogen exchanger family BSY240_4027 PF02080 TrkA-C domain BSY240_4028 PF02028 BCCT, betaine/carnitine/choline family transporter BSY240_4029 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSY240_4029 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BSY240_403 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BSY240_403 PF02769 AIR synthase related protein, C-terminal domain BSY240_403 PF00586 AIR synthase related protein, N-terminal domain BSY240_4030 PF02779 Transketolase, pyrimidine binding domain BSY240_4030 PF02780 Transketolase, C-terminal domain BSY240_4030 PF00456 Transketolase, thiamine diphosphate binding domain BSY240_4033 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_4033 PF00672 HAMP domain BSY240_4034 PF01812 5-formyltetrahydrofolate cyclo-ligase family BSY240_4035 PF13277 YmdB-like protein BSY240_4036 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_4036 PF12729 Four helix bundle sensory module for signal transduction BSY240_4036 PF00672 HAMP domain BSY240_4039 PF01709 Transcriptional regulator BSY240_404 PF00392 Bacterial regulatory proteins, gntR family BSY240_404 PF00155 Aminotransferase class I and II BSY240_4040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSY240_4040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSY240_4040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSY240_4040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSY240_4041 PF06480 FtsH Extracellular BSY240_4041 PF17862 AAA+ lid domain BSY240_4041 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_4041 PF01434 Peptidase family M41 BSY240_4042 PF01171 PP-loop family BSY240_4044 PF00691 OmpA family BSY240_4045 PF04052 TolB amino-terminal domain BSY240_4045 PF07676 WD40-like Beta Propeller Repeat BSY240_4047 PF02472 Biopolymer transport protein ExbD/TolR BSY240_4048 PF01618 MotA/TolQ/ExbB proton channel family BSY240_4049 PF03061 Thioesterase superfamily BSY240_4051 PF05163 DinB family BSY240_4052 PF00293 NUDIX domain BSY240_4053 PF05496 Holliday junction DNA helicase RuvB P-loop domain BSY240_4053 PF05491 RuvB C-terminal winged helix domain BSY240_4053 PF17864 RuvB AAA lid domain BSY240_4056 PF01330 RuvA N terminal domain BSY240_4056 PF07499 RuvA, C-terminal domain BSY240_4059 PF02075 Crossover junction endodeoxyribonuclease RuvC BSY240_4060 PF00296 Luciferase-like monooxygenase BSY240_4061 PF00672 HAMP domain BSY240_4061 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_4064 PF01842 ACT domain BSY240_4064 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSY240_4064 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSY240_4065 PF01654 Cytochrome bd terminal oxidase subunit I BSY240_4066 PF02322 Cytochrome bd terminal oxidase subunit II BSY240_4069 PF00583 Acetyltransferase (GNAT) family BSY240_4072 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_4072 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSY240_4077 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSY240_4077 PF13378 Enolase C-terminal domain-like BSY240_4079 PF03328 HpcH/HpaI aldolase/citrate lyase family BSY240_4080 PF02615 Malate/L-lactate dehydrogenase BSY240_4081 PF00072 Response regulator receiver domain BSY240_4081 PF02954 Bacterial regulatory protein, Fis family BSY240_4081 PF00158 Sigma-54 interaction domain BSY240_4082 PF02743 Cache domain BSY240_4082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4082 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4083 PF00375 Sodium:dicarboxylate symporter family BSY240_4085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSY240_4087 PF00732 GMC oxidoreductase BSY240_4087 PF05199 GMC oxidoreductase BSY240_409 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BSY240_4091 PF03167 Uracil DNA glycosylase superfamily BSY240_4092 PF01266 FAD dependent oxidoreductase BSY240_4093 PF00171 Aldehyde dehydrogenase family BSY240_4096 PF00149 Calcineurin-like phosphoesterase BSY240_4097 PF00892 EamA-like transporter family BSY240_4098 PF00709 Adenylosuccinate synthetase BSY240_41 PF06007 Phosphonate metabolism protein PhnJ BSY240_410 PF01259 SAICAR synthetase BSY240_4100 PF00005 ABC transporter BSY240_4102 PF00140 Sigma-70 factor, region 1.2 BSY240_4102 PF04545 Sigma-70, region 4 BSY240_4102 PF04542 Sigma-70 region 2 BSY240_4103 PF00849 RNA pseudouridylate synthase BSY240_4105 PF00588 SpoU rRNA Methylase family BSY240_4108 PF10090 Histidine phosphotransferase C-terminal domain BSY240_4110 PF00072 Response regulator receiver domain BSY240_4111 PF00072 Response regulator receiver domain BSY240_4111 PF00486 Transcriptional regulatory protein, C terminal BSY240_4113 PF14542 GCN5-related N-acetyl-transferase BSY240_4117 PF03472 Autoinducer binding domain BSY240_4117 PF00196 Bacterial regulatory proteins, luxR family BSY240_4119 PF00459 Inositol monophosphatase family BSY240_412 PF08448 PAS fold BSY240_412 PF08447 PAS fold BSY240_412 PF00990 Diguanylate cyclase, GGDEF domain BSY240_412 PF00563 EAL domain BSY240_4120 PF01266 FAD dependent oxidoreductase BSY240_4121 PF04267 Sarcosine oxidase, delta subunit family BSY240_4122 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_4122 PF17806 Sarcosine oxidase A3 domain BSY240_4122 PF01571 Aminomethyltransferase folate-binding domain BSY240_4122 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_4124 PF10518 TAT (twin-arginine translocation) pathway signal sequence BSY240_4124 PF00149 Calcineurin-like phosphoesterase BSY240_4127 PF16350 FAD dependent oxidoreductase central domain BSY240_4127 PF01571 Aminomethyltransferase folate-binding domain BSY240_4127 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_4127 PF01266 FAD dependent oxidoreductase BSY240_4128 PF02653 Branched-chain amino acid transport system / permease component BSY240_4129 PF02653 Branched-chain amino acid transport system / permease component BSY240_4129 PF11862 Domain of unknown function (DUF3382) BSY240_4130 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSY240_4130 PF00005 ABC transporter BSY240_4131 PF00005 ABC transporter BSY240_4133 PF13458 Periplasmic binding protein BSY240_4135 PF00072 Response regulator receiver domain BSY240_4136 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4136 PF00072 Response regulator receiver domain BSY240_4136 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_4136 PF00989 PAS fold BSY240_4136 PF01627 Hpt domain BSY240_4136 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4138 PF01590 GAF domain BSY240_4138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4138 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4138 PF08446 PAS fold BSY240_4138 PF00360 Phytochrome region BSY240_4139 PF01126 Heme oxygenase BSY240_414 PF07519 Tannase and feruloyl esterase BSY240_4141 PF02653 Branched-chain amino acid transport system / permease component BSY240_4143 PF00005 ABC transporter BSY240_4143 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSY240_4144 PF00005 ABC transporter BSY240_4146 PF01774 UreD urease accessory protein BSY240_4147 PF00547 Urease, gamma subunit BSY240_4148 PF00699 Urease beta subunit BSY240_4149 PF07007 Lysozyme inhibitor LprI BSY240_4151 PF01979 Amidohydrolase family BSY240_4151 PF00449 Urease alpha-subunit, N-terminal domain BSY240_4153 PF07694 5TMR of 5TMR-LYT BSY240_4153 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4154 PF05194 UreE urease accessory protein, C-terminal domain BSY240_4154 PF02814 UreE urease accessory protein, N-terminal domain BSY240_4155 PF01730 UreF BSY240_4156 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSY240_4157 PF13545 Crp-like helix-turn-helix domain BSY240_4157 PF00027 Cyclic nucleotide-binding domain BSY240_4158 PF00873 AcrB/AcrD/AcrF family BSY240_4159 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSY240_4161 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4162 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4164 PF00005 ABC transporter BSY240_4167 PF01979 Amidohydrolase family BSY240_4168 PF07687 Peptidase dimerisation domain BSY240_4168 PF01546 Peptidase family M20/M25/M40 BSY240_417 PF00206 Lyase BSY240_417 PF10397 Adenylosuccinate lyase C-terminus BSY240_4170 PF00440 Bacterial regulatory proteins, tetR family BSY240_4170 PF08362 YcdC-like protein, C-terminal region BSY240_4171 PF06055 Exopolysaccharide synthesis, ExoD BSY240_4172 PF03707 Bacterial signalling protein N terminal repeat BSY240_4172 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4172 PF00563 EAL domain BSY240_4173 PF01180 Dihydroorotate dehydrogenase BSY240_4174 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BSY240_4174 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_4179 PF01152 Bacterial-like globin BSY240_4180 PF00005 ABC transporter BSY240_4180 PF12848 ABC transporter BSY240_4182 PF16363 GDP-mannose 4,6 dehydratase BSY240_4183 PF03275 UDP-galactopyranose mutase BSY240_4187 PF01758 Sodium Bile acid symporter family BSY240_4188 PF00501 AMP-binding enzyme BSY240_4188 PF13193 AMP-binding enzyme C-terminal domain BSY240_4193 PF04168 A predicted alpha-helical domain with a conserved ER motif. BSY240_4193 PF14403 Circularly permuted ATP-grasp type 2 BSY240_4194 PF14403 Circularly permuted ATP-grasp type 2 BSY240_4196 PF00271 Helicase conserved C-terminal domain BSY240_4196 PF00270 DEAD/DEAH box helicase BSY240_4198 PF08713 DNA alkylation repair enzyme BSY240_42 PF05861 Bacterial phosphonate metabolism protein (PhnI) BSY240_420 PF00834 Ribulose-phosphate 3 epimerase family BSY240_4201 PF00672 HAMP domain BSY240_4201 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_4201 PF02203 Tar ligand binding domain homologue BSY240_4202 PF06253 Trimethylamine methyltransferase (MTTB) BSY240_4203 PF01266 FAD dependent oxidoreductase BSY240_4203 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BSY240_4204 PF00072 Response regulator receiver domain BSY240_4204 PF00672 HAMP domain BSY240_4204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4204 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4204 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BSY240_4204 PF01627 Hpt domain BSY240_4205 PF05690 Thiazole biosynthesis protein ThiG BSY240_4205 PF01266 FAD dependent oxidoreductase BSY240_4206 PF06299 Protein of unknown function (DUF1045) BSY240_4208 PF03466 LysR substrate binding domain BSY240_4208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4210 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_4210 PF00107 Zinc-binding dehydrogenase BSY240_4211 PF09349 OHCU decarboxylase BSY240_4211 PF01014 Uricase BSY240_4212 PF10931 Protein of unknown function (DUF2735) BSY240_4213 PF03951 Glutamine synthetase, beta-Grasp domain BSY240_4213 PF00120 Glutamine synthetase, catalytic domain BSY240_4215 PF01554 MatE BSY240_4216 PF04115 Ureidoglycolate lyase BSY240_4217 PF00576 HIUase/Transthyretin family BSY240_4219 PF01070 FMN-dependent dehydrogenase BSY240_4221 PF01979 Amidohydrolase family BSY240_4223 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4223 PF03466 LysR substrate binding domain BSY240_4226 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSY240_4226 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSY240_4227 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSY240_4227 PF00941 FAD binding domain in molybdopterin dehydrogenase BSY240_4229 PF00296 Luciferase-like monooxygenase BSY240_423 PF01613 Flavin reductase like domain BSY240_4230 PF00557 Metallopeptidase family M24 BSY240_4232 PF05992 SbmA/BacA-like family BSY240_4237 PF01926 50S ribosome-binding GTPase BSY240_4237 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BSY240_4238 PF13439 Glycosyltransferase Family 4 BSY240_4238 PF00534 Glycosyl transferases group 1 BSY240_4239 PF00128 Alpha amylase, catalytic domain BSY240_424 PF05362 Lon protease (S16) C-terminal proteolytic domain BSY240_424 PF02190 ATP-dependent protease La (LON) substrate-binding domain BSY240_424 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_4240 PF00583 Acetyltransferase (GNAT) family BSY240_4243 PF13382 Adenine deaminase C-terminal domain BSY240_4243 PF01979 Amidohydrolase family BSY240_4245 PF04199 Putative cyclase BSY240_4252 PF13458 Periplasmic binding protein BSY240_4254 PF00202 Aminotransferase class-III BSY240_4255 PF01022 Bacterial regulatory protein, arsR family BSY240_4257 PF00005 ABC transporter BSY240_4257 PF00571 CBS domain BSY240_4258 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4260 PF00034 Cytochrome c BSY240_4268 PF00196 Bacterial regulatory proteins, luxR family BSY240_4268 PF03472 Autoinducer binding domain BSY240_4269 PF01037 Lrp/AsnC ligand binding domain BSY240_427 PF13478 XdhC Rossmann domain BSY240_427 PF02625 XdhC and CoxI family BSY240_4270 PF00171 Aldehyde dehydrogenase family BSY240_4270 PF14850 DNA-binding domain of Proline dehydrogenase BSY240_4270 PF01619 Proline dehydrogenase BSY240_4270 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BSY240_4271 PF01268 Formate--tetrahydrofolate ligase BSY240_4272 PF07715 TonB-dependent Receptor Plug Domain BSY240_4272 PF00593 TonB dependent receptor BSY240_4274 PF04715 Anthranilate synthase component I, N terminal region BSY240_4274 PF00117 Glutamine amidotransferase class-I BSY240_4274 PF00425 chorismate binding enzyme BSY240_4277 PF07715 TonB-dependent Receptor Plug Domain BSY240_4277 PF00593 TonB dependent receptor BSY240_4278 PF16916 Dimerisation domain of Zinc Transporter BSY240_4278 PF01545 Cation efflux family BSY240_4279 PF14489 QueF-like protein BSY240_428 PF12804 MobA-like NTP transferase domain BSY240_4287 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BSY240_4292 PF16350 FAD dependent oxidoreductase central domain BSY240_4292 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_4292 PF01266 FAD dependent oxidoreductase BSY240_4292 PF01571 Aminomethyltransferase folate-binding domain BSY240_4295 PF00171 Aldehyde dehydrogenase family BSY240_4296 PF03707 Bacterial signalling protein N terminal repeat BSY240_4296 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4296 PF00563 EAL domain BSY240_4298 PF01037 Lrp/AsnC ligand binding domain BSY240_4302 PF00574 Clp protease BSY240_4306 PF05973 Phage derived protein Gp49-like (DUF891) BSY240_4309 PF03435 Saccharopine dehydrogenase NADP binding domain BSY240_4309 PF16653 Saccharopine dehydrogenase C-terminal domain BSY240_431 PF00270 DEAD/DEAH box helicase BSY240_431 PF00271 Helicase conserved C-terminal domain BSY240_4310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BSY240_4311 PF08447 PAS fold BSY240_4311 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4311 PF05231 MASE1 BSY240_4311 PF13426 PAS domain BSY240_4311 PF08448 PAS fold BSY240_4311 PF00563 EAL domain BSY240_4312 PF03594 Benzoate membrane transport protein BSY240_4315 PF00682 HMGL-like BSY240_4315 PF08502 LeuA allosteric (dimerisation) domain BSY240_4316 PF00561 alpha/beta hydrolase fold BSY240_4316 PF00364 Biotin-requiring enzyme BSY240_4318 PF00293 NUDIX domain BSY240_4319 PF13409 Glutathione S-transferase, N-terminal domain BSY240_432 PF08525 Opacity-associated protein A N-terminal motif BSY240_432 PF01551 Peptidase family M23 BSY240_432 PF01476 LysM domain BSY240_4322 PF00583 Acetyltransferase (GNAT) family BSY240_4323 PF13302 Acetyltransferase (GNAT) domain BSY240_4327 PF07726 ATPase family associated with various cellular activities (AAA) BSY240_4327 PF17863 AAA lid domain BSY240_4329 PF00293 NUDIX domain BSY240_433 PF04305 Protein of unknown function (DUF455) BSY240_4330 PF13735 tRNA nucleotidyltransferase domain 2 putative BSY240_4330 PF12627 Probable RNA and SrmB- binding site of polymerase A BSY240_4330 PF01743 Poly A polymerase head domain BSY240_4331 PF02469 Fasciclin domain BSY240_4334 PF01218 Coproporphyrinogen III oxidase BSY240_4338 PF00588 SpoU rRNA Methylase family BSY240_4339 PF00664 ABC transporter transmembrane region BSY240_4339 PF00005 ABC transporter BSY240_434 PF00578 AhpC/TSA family BSY240_4344 PF00664 ABC transporter transmembrane region BSY240_4344 PF00005 ABC transporter BSY240_4345 PF00355 Rieske [2Fe-2S] domain BSY240_4345 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BSY240_4346 PF00033 Cytochrome b/b6/petB BSY240_4346 PF00032 Cytochrome b(C-terminal)/b6/petD BSY240_4347 PF00032 Cytochrome b(C-terminal)/b6/petD BSY240_4347 PF02167 Cytochrome C1 family BSY240_4347 PF00033 Cytochrome b/b6/petB BSY240_4348 PF00156 Phosphoribosyl transferase domain BSY240_4349 PF01810 LysE type translocator BSY240_4351 PF00255 Glutathione peroxidase BSY240_4356 PF01926 50S ribosome-binding GTPase BSY240_4356 PF06071 Protein of unknown function (DUF933) BSY240_4357 PF02617 ATP-dependent Clp protease adaptor protein ClpS BSY240_4359 PF01042 Endoribonuclease L-PSP BSY240_436 PF02571 Precorrin-6x reductase CbiJ/CobK BSY240_4362 PF05175 Methyltransferase small domain BSY240_4363 PF01195 Peptidyl-tRNA hydrolase BSY240_4365 PF03707 Bacterial signalling protein N terminal repeat BSY240_4365 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4365 PF00563 EAL domain BSY240_4366 PF14693 Ribosomal protein TL5, C-terminal domain BSY240_4366 PF01386 Ribosomal L25p family BSY240_4367 PF13188 PAS domain BSY240_4367 PF03707 Bacterial signalling protein N terminal repeat BSY240_4367 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4367 PF00563 EAL domain BSY240_4368 PF00158 Sigma-54 interaction domain BSY240_4368 PF13426 PAS domain BSY240_4368 PF02954 Bacterial regulatory protein, Fis family BSY240_4369 PF00171 Aldehyde dehydrogenase family BSY240_437 PF01888 CbiD BSY240_4371 PF02203 Tar ligand binding domain homologue BSY240_4371 PF00672 HAMP domain BSY240_4371 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_4373 PF14572 Phosphoribosyl synthetase-associated domain BSY240_4373 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BSY240_4378 PF01790 Prolipoprotein diacylglyceryl transferase BSY240_438 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_4381 PF14748 Pyrroline-5-carboxylate reductase dimerisation BSY240_4381 PF03807 NADP oxidoreductase coenzyme F420-dependent BSY240_4382 PF01588 Putative tRNA binding domain BSY240_4383 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4383 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4383 PF16527 Two-component sensor protein CpxA, periplasmic domain BSY240_4383 PF00672 HAMP domain BSY240_4384 PF00486 Transcriptional regulatory protein, C terminal BSY240_4384 PF00072 Response regulator receiver domain BSY240_4385 PF12802 MarR family BSY240_4387 PF00753 Metallo-beta-lactamase superfamily BSY240_4389 PF00313 'Cold-shock' DNA-binding domain BSY240_439 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSY240_439 PF07685 CobB/CobQ-like glutamine amidotransferase domain BSY240_4390 PF07995 Glucose / Sorbosone dehydrogenase BSY240_4393 PF07995 Glucose / Sorbosone dehydrogenase BSY240_4397 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4397 PF03466 LysR substrate binding domain BSY240_440 PF00155 Aminotransferase class I and II BSY240_4400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSY240_4402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4402 PF03466 LysR substrate binding domain BSY240_4403 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_4404 PF01037 Lrp/AsnC ligand binding domain BSY240_4406 PF00534 Glycosyl transferases group 1 BSY240_4407 PF01272 Transcription elongation factor, GreA/GreB, C-term BSY240_4407 PF03449 Transcription elongation factor, N-terminal BSY240_441 PF03186 CobD/Cbib protein BSY240_4411 PF00486 Transcriptional regulatory protein, C terminal BSY240_4411 PF00072 Response regulator receiver domain BSY240_4412 PF18698 Histidine kinase sensor domain BSY240_4412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4412 PF00672 HAMP domain BSY240_4412 PF00989 PAS fold BSY240_4412 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4414 PF00892 EamA-like transporter family BSY240_4417 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSY240_4417 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_4417 PF02142 MGS-like domain BSY240_442 PF00027 Cyclic nucleotide-binding domain BSY240_442 PF13545 Crp-like helix-turn-helix domain BSY240_4420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_4420 PF00672 HAMP domain BSY240_4421 PF01425 Amidase BSY240_4422 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_4422 PF00107 Zinc-binding dehydrogenase BSY240_4426 PF04228 Putative neutral zinc metallopeptidase BSY240_4428 PF01554 MatE BSY240_4429 PF00117 Glutamine amidotransferase class-I BSY240_4429 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BSY240_443 PF04055 Radical SAM superfamily BSY240_4433 PF01807 CHC2 zinc finger BSY240_4433 PF10410 DnaB-helicase binding domain of primase BSY240_4433 PF08278 DNA primase DnaG DnaB-binding BSY240_4433 PF08275 DNA primase catalytic core, N-terminal domain BSY240_4434 PF00211 Adenylate and Guanylate cyclase catalytic domain BSY240_4435 PF04545 Sigma-70, region 4 BSY240_4435 PF04539 Sigma-70 region 3 BSY240_4435 PF04542 Sigma-70 region 2 BSY240_4435 PF00140 Sigma-70 factor, region 1.2 BSY240_4435 PF03979 Sigma-70 factor, region 1.1 BSY240_4435 PF04546 Sigma-70, non-essential region BSY240_4439 PF01546 Peptidase family M20/M25/M40 BSY240_4439 PF07687 Peptidase dimerisation domain BSY240_444 PF00550 Phosphopantetheine attachment site BSY240_4443 PF03928 Haem-degrading BSY240_4444 PF01894 Uncharacterised protein family UPF0047 BSY240_445 PF07977 FabA-like domain BSY240_4450 PF00005 ABC transporter BSY240_4450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSY240_4452 PF07756 Protein of unknown function (DUF1612) BSY240_4452 PF11972 HTH DNA binding domain BSY240_4455 PF02661 Fic/DOC family BSY240_4455 PF13784 Fic/DOC family N-terminal BSY240_4456 PF02608 ABC transporter substrate-binding protein PnrA-like BSY240_4457 PF01425 Amidase BSY240_446 PF02801 Beta-ketoacyl synthase, C-terminal domain BSY240_446 PF00109 Beta-ketoacyl synthase, N-terminal domain BSY240_4461 PF07969 Amidohydrolase family BSY240_4462 PF12833 Helix-turn-helix domain BSY240_4462 PF06719 AraC-type transcriptional regulator N-terminus BSY240_4463 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSY240_4464 PF00005 ABC transporter BSY240_4467 PF03466 LysR substrate binding domain BSY240_4467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_447 PF02801 Beta-ketoacyl synthase, C-terminal domain BSY240_447 PF00109 Beta-ketoacyl synthase, N-terminal domain BSY240_4470 PF01979 Amidohydrolase family BSY240_4477 PF02661 Fic/DOC family BSY240_4477 PF13784 Fic/DOC family N-terminal BSY240_4478 PF03466 LysR substrate binding domain BSY240_4478 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4479 PF02798 Glutathione S-transferase, N-terminal domain BSY240_448 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_448 PF00107 Zinc-binding dehydrogenase BSY240_4480 PF00970 Oxidoreductase FAD-binding domain BSY240_4480 PF00042 Globin BSY240_4480 PF00175 Oxidoreductase NAD-binding domain BSY240_4481 PF01370 NAD dependent epimerase/dehydratase family BSY240_4484 PF00326 Prolyl oligopeptidase family BSY240_4484 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BSY240_4487 PF11808 Phosphate regulon sensor protein PhoR BSY240_4487 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4487 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4487 PF00989 PAS fold BSY240_4488 PF00072 Response regulator receiver domain BSY240_4488 PF00486 Transcriptional regulatory protein, C terminal BSY240_4492 PF00106 short chain dehydrogenase BSY240_4493 PF03466 LysR substrate binding domain BSY240_4493 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4495 PF00248 Aldo/keto reductase family BSY240_4497 PF12852 Cupin BSY240_4497 PF12833 Helix-turn-helix domain BSY240_4500 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_4502 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_4502 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSY240_4503 PF01370 NAD dependent epimerase/dehydratase family BSY240_4504 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSY240_4504 PF13378 Enolase C-terminal domain-like BSY240_4505 PF01614 Bacterial transcriptional regulator BSY240_4505 PF09339 IclR helix-turn-helix domain BSY240_4507 PF03737 Aldolase/RraA BSY240_4510 PF07729 FCD domain BSY240_4510 PF00392 Bacterial regulatory proteins, gntR family BSY240_4511 PF00920 Dehydratase family BSY240_4513 PF13407 Periplasmic binding protein domain BSY240_4514 PF00005 ABC transporter BSY240_4515 PF02653 Branched-chain amino acid transport system / permease component BSY240_4516 PF00171 Aldehyde dehydrogenase family BSY240_4517 PF00872 Transposase, Mutator family BSY240_452 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSY240_4520 PF01381 Helix-turn-helix BSY240_4521 PF07804 HipA-like C-terminal domain BSY240_4521 PF13657 HipA N-terminal domain BSY240_4522 PF00743 Flavin-binding monooxygenase-like BSY240_4523 PF00107 Zinc-binding dehydrogenase BSY240_4523 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_4524 PF00158 Sigma-54 interaction domain BSY240_4524 PF02954 Bacterial regulatory protein, Fis family BSY240_4524 PF01590 GAF domain BSY240_4526 PF03466 LysR substrate binding domain BSY240_4526 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4527 PF03746 LamB/YcsF family BSY240_4528 PF00364 Biotin-requiring enzyme BSY240_4529 PF02785 Biotin carboxylase C-terminal domain BSY240_4529 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSY240_4529 PF00289 Biotin carboxylase, N-terminal domain BSY240_4531 PF02626 Carboxyltransferase domain, subdomain A and B BSY240_4532 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BSY240_4533 PF00005 ABC transporter BSY240_4534 PF02653 Branched-chain amino acid transport system / permease component BSY240_4539 PF18818 Metallopeptidase superfamily domain BSY240_4539 PF08401 Domain of unknown function (DUF1738) BSY240_4540 PF07804 HipA-like C-terminal domain BSY240_4540 PF13657 HipA N-terminal domain BSY240_4547 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4547 PF17151 Periplasmic sensor domain BSY240_4549 PF00313 'Cold-shock' DNA-binding domain BSY240_455 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BSY240_455 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BSY240_4550 PF01381 Helix-turn-helix BSY240_4551 PF13361 UvrD-like helicase C-terminal domain BSY240_4551 PF00580 UvrD/REP helicase N-terminal domain BSY240_4553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4553 PF03466 LysR substrate binding domain BSY240_4556 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4556 PF03707 Bacterial signalling protein N terminal repeat BSY240_4556 PF00563 EAL domain BSY240_4557 PF00872 Transposase, Mutator family BSY240_4558 PF13610 DDE domain BSY240_456 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BSY240_456 PF12801 4Fe-4S binding domain BSY240_456 PF13746 4Fe-4S dicluster domain BSY240_4560 PF02719 Polysaccharide biosynthesis protein BSY240_4561 PF01370 NAD dependent epimerase/dehydratase family BSY240_4562 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BSY240_4562 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BSY240_4562 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BSY240_4565 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_4566 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BSY240_4567 PF16363 GDP-mannose 4,6 dehydratase BSY240_4568 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BSY240_4569 PF00733 Asparagine synthase BSY240_4569 PF13537 Glutamine amidotransferase domain BSY240_457 PF05751 FixH BSY240_4570 PF01370 NAD dependent epimerase/dehydratase family BSY240_4570 PF02911 Formyl transferase, C-terminal domain BSY240_4570 PF00551 Formyl transferase BSY240_4574 PF00664 ABC transporter transmembrane region BSY240_4574 PF00005 ABC transporter BSY240_4575 PF00117 Glutamine amidotransferase class-I BSY240_4576 PF00977 Histidine biosynthesis protein BSY240_4583 PF13537 Glutamine amidotransferase domain BSY240_4583 PF00733 Asparagine synthase BSY240_4586 PF02350 UDP-N-acetylglucosamine 2-epimerase BSY240_459 PF03597 Cytochrome oxidase maturation protein cbb3-type BSY240_4590 PF02397 Bacterial sugar transferase BSY240_4592 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BSY240_4593 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BSY240_4593 PF01266 FAD dependent oxidoreductase BSY240_4594 PF01370 NAD dependent epimerase/dehydratase family BSY240_4596 PF01609 Transposase DDE domain BSY240_4597 PF13439 Glycosyltransferase Family 4 BSY240_4597 PF00534 Glycosyl transferases group 1 BSY240_460 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BSY240_460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSY240_4602 PF00248 Aldo/keto reductase family BSY240_4604 PF00356 Bacterial regulatory proteins, lacI family BSY240_4606 PF13407 Periplasmic binding protein domain BSY240_4607 PF00005 ABC transporter BSY240_4608 PF02653 Branched-chain amino acid transport system / permease component BSY240_4609 PF02733 Dak1 domain BSY240_461 PF12706 Beta-lactamase superfamily domain BSY240_4610 PF02734 DAK2 domain BSY240_4611 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSY240_4611 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSY240_4612 PF00392 Bacterial regulatory proteins, gntR family BSY240_4612 PF07729 FCD domain BSY240_4613 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSY240_4613 PF13378 Enolase C-terminal domain-like BSY240_4617 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_462 PF07694 5TMR of 5TMR-LYT BSY240_462 PF00990 Diguanylate cyclase, GGDEF domain BSY240_4622 PF00106 short chain dehydrogenase BSY240_4624 PF03466 LysR substrate binding domain BSY240_4624 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4625 PF06445 GyrI-like small molecule binding domain BSY240_4625 PF12833 Helix-turn-helix domain BSY240_4628 PF03795 YCII-related domain BSY240_4629 PF03795 YCII-related domain BSY240_4630 PF01850 PIN domain BSY240_4631 PF09957 Bacterial antitoxin of type II TA system, VapB BSY240_4632 PF00512 His Kinase A (phospho-acceptor) domain BSY240_4632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_4632 PF00672 HAMP domain BSY240_4633 PF00486 Transcriptional regulatory protein, C terminal BSY240_4633 PF00072 Response regulator receiver domain BSY240_4638 PF00005 ABC transporter BSY240_4638 PF02687 FtsX-like permease family BSY240_4638 PF12704 MacB-like periplasmic core domain BSY240_4639 PF00589 Phage integrase family BSY240_4639 PF02899 Phage integrase, N-terminal SAM-like domain BSY240_464 PF01547 Bacterial extracellular solute-binding protein BSY240_4645 PF00561 alpha/beta hydrolase fold BSY240_4652 PF00356 Bacterial regulatory proteins, lacI family BSY240_4655 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4656 PF08402 TOBE domain BSY240_4656 PF00005 ABC transporter BSY240_4659 PF01527 Transposase BSY240_466 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4665 PF01381 Helix-turn-helix BSY240_4666 PF00990 Diguanylate cyclase, GGDEF domain BSY240_467 PF17912 MalK OB fold domain BSY240_467 PF00005 ABC transporter BSY240_4671 PF05284 Protein of unknown function (DUF736) BSY240_4675 PF05406 WGR domain BSY240_4676 PF02534 Type IV secretory system Conjugative DNA transfer BSY240_4677 PF06412 Conjugal transfer protein TraD BSY240_4678 PF07820 TraC-like protein BSY240_4679 PF17841 BID domain of Bartonella effector protein (Bep) BSY240_4679 PF01443 Viral (Superfamily 1) RNA helicase BSY240_4679 PF03389 MobA/MobL family BSY240_4680 PF10502 Signal peptidase, peptidase S26 BSY240_4681 PF00795 Carbon-nitrogen hydrolase BSY240_4685 PF02673 Bacitracin resistance protein BacA BSY240_4690 PF00483 Nucleotidyl transferase BSY240_470 PF10518 TAT (twin-arginine translocation) pathway signal sequence BSY240_470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSY240_4701 PF00149 Calcineurin-like phosphoesterase BSY240_4702 PF13614 AAA domain BSY240_4703 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BSY240_4703 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BSY240_4703 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BSY240_4704 PF16363 GDP-mannose 4,6 dehydratase BSY240_471 PF00248 Aldo/keto reductase family BSY240_4711 PF01548 Transposase BSY240_4711 PF02371 Transposase IS116/IS110/IS902 family BSY240_4712 PF02371 Transposase IS116/IS110/IS902 family BSY240_4712 PF01548 Transposase BSY240_4713 PF01527 Transposase BSY240_4714 PF13276 HTH-like domain BSY240_4714 PF13333 Integrase core domain BSY240_4714 PF00665 Integrase core domain BSY240_4715 PF02397 Bacterial sugar transferase BSY240_4716 PF13276 HTH-like domain BSY240_4716 PF00665 Integrase core domain BSY240_4717 PF01527 Transposase BSY240_472 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BSY240_472 PF04616 Glycosyl hydrolases family 43 BSY240_4723 PF00665 Integrase core domain BSY240_4723 PF13936 Helix-turn-helix domain BSY240_4724 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4724 PF03466 LysR substrate binding domain BSY240_4725 PF01381 Helix-turn-helix BSY240_4727 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4728 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_4729 PF08402 TOBE domain BSY240_4729 PF00005 ABC transporter BSY240_473 PF00756 Putative esterase BSY240_4732 PF00795 Carbon-nitrogen hydrolase BSY240_4738 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_4738 PF03466 LysR substrate binding domain BSY240_474 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BSY240_4742 PF00857 Isochorismatase family BSY240_4744 PF00857 Isochorismatase family BSY240_4746 PF01425 Amidase BSY240_4747 PF12833 Helix-turn-helix domain BSY240_475 PF13673 Acetyltransferase (GNAT) domain BSY240_4755 PF00486 Transcriptional regulatory protein, C terminal BSY240_4755 PF00072 Response regulator receiver domain BSY240_4756 PF00486 Transcriptional regulatory protein, C terminal BSY240_4756 PF00072 Response regulator receiver domain BSY240_4757 PF03472 Autoinducer binding domain BSY240_4757 PF00196 Bacterial regulatory proteins, luxR family BSY240_4758 PF03743 Bacterial conjugation TrbI-like protein BSY240_476 PF00107 Zinc-binding dehydrogenase BSY240_476 PF08240 Alcohol dehydrogenase GroES-like domain BSY240_4760 PF03524 Conjugal transfer protein BSY240_4761 PF04335 VirB8 protein BSY240_4762 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BSY240_4764 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BSY240_4765 PF05101 Type IV secretory pathway, VirB3-like protein BSY240_4766 PF04956 TrbC/VIRB2 family BSY240_4767 PF00437 Type II/IV secretion system protein BSY240_4768 PF00765 Autoinducer synthase BSY240_4769 PF00376 MerR family regulatory protein BSY240_4769 PF13614 AAA domain BSY240_4770 PF02195 ParB-like nuclease domain BSY240_4770 PF07506 RepB plasmid partitioning protein BSY240_4771 PF11800 Replication protein C C-terminal region BSY240_4771 PF03428 Replication protein C N-terminal domain BSY240_4772 PF02203 Tar ligand binding domain homologue BSY240_4772 PF00672 HAMP domain BSY240_4772 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_481 PF03099 Biotin/lipoate A/B protein ligase family BSY240_487 PF01327 Polypeptide deformylase BSY240_488 PF03448 MgtE intracellular N domain BSY240_488 PF01769 Divalent cation transporter BSY240_488 PF00571 CBS domain BSY240_489 PF09278 MerR, DNA binding BSY240_489 PF00376 MerR family regulatory protein BSY240_49 PF03435 Saccharopine dehydrogenase NADP binding domain BSY240_49 PF16653 Saccharopine dehydrogenase C-terminal domain BSY240_493 PF03313 Serine dehydratase alpha chain BSY240_493 PF03315 Serine dehydratase beta chain BSY240_497 PF01207 Dihydrouridine synthase (Dus) BSY240_498 PF00313 'Cold-shock' DNA-binding domain BSY240_499 PF00684 DnaJ central domain BSY240_499 PF01556 DnaJ C terminal domain BSY240_499 PF00226 DnaJ domain BSY240_5 PF13593 SBF-like CPA transporter family (DUF4137) BSY240_50 PF00005 ABC transporter BSY240_505 PF04851 Type III restriction enzyme, res subunit BSY240_505 PF00271 Helicase conserved C-terminal domain BSY240_505 PF02151 UvrB/uvrC motif BSY240_505 PF12344 Ultra-violet resistance protein B BSY240_505 PF17757 UvrB interaction domain BSY240_507 PF03707 Bacterial signalling protein N terminal repeat BSY240_507 PF00990 Diguanylate cyclase, GGDEF domain BSY240_507 PF00563 EAL domain BSY240_51 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_511 PF03061 Thioesterase superfamily BSY240_512 PF00672 HAMP domain BSY240_512 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_512 PF17200 Single Cache domain 2 BSY240_514 PF01925 Sulfite exporter TauE/SafE BSY240_516 PF01965 DJ-1/PfpI family BSY240_516 PF12833 Helix-turn-helix domain BSY240_519 PF03466 LysR substrate binding domain BSY240_519 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_52 PF00701 Dihydrodipicolinate synthetase family BSY240_521 PF00300 Histidine phosphatase superfamily (branch 1) BSY240_523 PF00440 Bacterial regulatory proteins, tetR family BSY240_523 PF17754 MftR C-terminal domain BSY240_524 PF00155 Aminotransferase class I and II BSY240_524 PF00392 Bacterial regulatory proteins, gntR family BSY240_525 PF02525 Flavodoxin-like fold BSY240_528 PF02607 B12 binding domain BSY240_528 PF02310 B12 binding domain BSY240_528 PF02574 Homocysteine S-methyltransferase BSY240_528 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSY240_528 PF00809 Pterin binding enzyme BSY240_53 PF05173 Dihydrodipicolinate reductase, C-terminus BSY240_53 PF01113 Dihydrodipicolinate reductase, N-terminus BSY240_538 PF02607 B12 binding domain BSY240_538 PF02310 B12 binding domain BSY240_539 PF06253 Trimethylamine methyltransferase (MTTB) BSY240_54 PF00171 Aldehyde dehydrogenase family BSY240_542 PF09992 Phosphodiester glycosidase BSY240_544 PF00005 ABC transporter BSY240_544 PF12704 MacB-like periplasmic core domain BSY240_544 PF02687 FtsX-like permease family BSY240_545 PF12704 MacB-like periplasmic core domain BSY240_545 PF00005 ABC transporter BSY240_545 PF02687 FtsX-like permease family BSY240_546 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSY240_547 PF01638 HxlR-like helix-turn-helix BSY240_549 PF00775 Dioxygenase BSY240_549 PF04444 Catechol dioxygenase N terminus BSY240_55 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_55 PF04324 BFD-like [2Fe-2S] binding domain BSY240_550 PF13356 Arm DNA-binding domain BSY240_550 PF00589 Phage integrase family BSY240_554 PF12161 HsdM N-terminal domain BSY240_554 PF02384 N-6 DNA Methylase BSY240_558 PF04851 Type III restriction enzyme, res subunit BSY240_558 PF00271 Helicase conserved C-terminal domain BSY240_558 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BSY240_558 PF08463 EcoEI R protein C-terminal BSY240_563 PF02683 Cytochrome C biogenesis protein transmembrane region BSY240_564 PF01494 FAD binding domain BSY240_565 PF03547 Membrane transport protein BSY240_57 PF01266 FAD dependent oxidoreductase BSY240_570 PF02608 ABC transporter substrate-binding protein PnrA-like BSY240_571 PF07729 FCD domain BSY240_571 PF00392 Bacterial regulatory proteins, gntR family BSY240_572 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_572 PF12804 MobA-like NTP transferase domain BSY240_573 PF01380 SIS domain BSY240_575 PF00271 Helicase conserved C-terminal domain BSY240_575 PF17191 RecG wedge domain BSY240_575 PF00270 DEAD/DEAH box helicase BSY240_577 PF03461 TRCF domain BSY240_577 PF17757 UvrB interaction domain BSY240_577 PF02559 CarD-like/TRCF domain BSY240_577 PF00270 DEAD/DEAH box helicase BSY240_577 PF00271 Helicase conserved C-terminal domain BSY240_578 PF00892 EamA-like transporter family BSY240_58 PF03466 LysR substrate binding domain BSY240_58 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSY240_584 PF03951 Glutamine synthetase, beta-Grasp domain BSY240_584 PF00120 Glutamine synthetase, catalytic domain BSY240_585 PF00543 Nitrogen regulatory protein P-II BSY240_586 PF01256 Carbohydrate kinase BSY240_586 PF03853 YjeF-related protein N-terminus BSY240_587 PF02690 Na+/Pi-cotransporter BSY240_589 PF17760 UvrA interaction domain BSY240_589 PF17755 UvrA DNA-binding domain BSY240_59 PF01464 Transglycosylase SLT domain BSY240_59 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_590 PF00436 Single-strand binding protein family BSY240_596 PF13538 UvrD-like helicase C-terminal domain BSY240_596 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BSY240_596 PF14490 Helix-hairpin-helix containing domain BSY240_598 PF01434 Peptidase family M41 BSY240_598 PF17862 AAA+ lid domain BSY240_598 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_606 PF00145 C-5 cytosine-specific DNA methylase BSY240_607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_607 PF00989 PAS fold BSY240_607 PF00512 His Kinase A (phospho-acceptor) domain BSY240_61 PF03928 Haem-degrading BSY240_610 PF01914 MarC family integral membrane protein BSY240_611 PF00521 DNA gyrase/topoisomerase IV, subunit A BSY240_611 PF03989 DNA gyrase C-terminal domain, beta-propeller BSY240_615 PF01467 Cytidylyltransferase-like BSY240_616 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BSY240_617 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BSY240_618 PF02547 Queuosine biosynthesis protein BSY240_619 PF01702 Queuine tRNA-ribosyltransferase BSY240_62 PF00356 Bacterial regulatory proteins, lacI family BSY240_621 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSY240_622 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSY240_623 PF03480 Bacterial extracellular solute-binding protein, family 7 BSY240_624 PF00933 Glycosyl hydrolase family 3 N terminal domain BSY240_624 PF01915 Glycosyl hydrolase family 3 C-terminal domain BSY240_624 PF07691 PA14 domain BSY240_624 PF14310 Fibronectin type III-like domain BSY240_629 PF01026 TatD related DNase BSY240_63 PF13407 Periplasmic binding protein domain BSY240_630 PF08264 Anticodon-binding domain of tRNA BSY240_630 PF09334 tRNA synthetases class I (M) BSY240_631 PF09115 DNA polymerase III, delta subunit, C terminal BSY240_632 PF02223 Thymidylate kinase BSY240_633 PF00768 D-alanyl-D-alanine carboxypeptidase BSY240_633 PF07943 Penicillin-binding protein 5, C-terminal domain BSY240_634 PF05036 Sporulation related domain BSY240_634 PF03330 Lytic transglycolase BSY240_638 PF03069 Acetamidase/Formamidase family BSY240_639 PF00005 ABC transporter BSY240_64 PF00005 ABC transporter BSY240_640 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSY240_640 PF00005 ABC transporter BSY240_642 PF02653 Branched-chain amino acid transport system / permease component BSY240_642 PF11862 Domain of unknown function (DUF3382) BSY240_643 PF13458 Periplasmic binding protein BSY240_644 PF01627 Hpt domain BSY240_644 PF00989 PAS fold BSY240_644 PF00072 Response regulator receiver domain BSY240_644 PF00512 His Kinase A (phospho-acceptor) domain BSY240_644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_644 PF18415 Histidine kinase receptor ArcB trans-membrane domain BSY240_645 PF00990 Diguanylate cyclase, GGDEF domain BSY240_645 PF00072 Response regulator receiver domain BSY240_646 PF03707 Bacterial signalling protein N terminal repeat BSY240_646 PF00563 EAL domain BSY240_646 PF00990 Diguanylate cyclase, GGDEF domain BSY240_647 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSY240_647 PF00941 FAD binding domain in molybdopterin dehydrogenase BSY240_648 PF00111 2Fe-2S iron-sulfur cluster binding domain BSY240_648 PF01799 [2Fe-2S] binding domain BSY240_649 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSY240_649 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSY240_65 PF02653 Branched-chain amino acid transport system / permease component BSY240_650 PF10431 C-terminal, D2-small domain, of ClpB protein BSY240_650 PF02861 Clp amino terminal domain, pathogenicity island component BSY240_650 PF17871 AAA lid domain BSY240_650 PF07724 AAA domain (Cdc48 subfamily) BSY240_650 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_652 PF13478 XdhC Rossmann domain BSY240_652 PF02625 XdhC and CoxI family BSY240_656 PF07685 CobB/CobQ-like glutamine amidotransferase domain BSY240_656 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSY240_659 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_66 PF02126 Phosphotriesterase family BSY240_660 PF00005 ABC transporter BSY240_660 PF00571 CBS domain BSY240_661 PF02607 B12 binding domain BSY240_661 PF02574 Homocysteine S-methyltransferase BSY240_661 PF02310 B12 binding domain BSY240_661 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSY240_661 PF00809 Pterin binding enzyme BSY240_663 PF00970 Oxidoreductase FAD-binding domain BSY240_663 PF00175 Oxidoreductase NAD-binding domain BSY240_667 PF14824 Sirohaem biosynthesis protein central BSY240_667 PF10414 Sirohaem synthase dimerisation region BSY240_667 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_669 PF03819 MazG nucleotide pyrophosphohydrolase domain BSY240_670 PF02830 V4R domain BSY240_671 PF01494 FAD binding domain BSY240_672 PF04055 Radical SAM superfamily BSY240_672 PF02310 B12 binding domain BSY240_673 PF13167 GTP-binding GTPase N-terminal BSY240_673 PF01926 50S ribosome-binding GTPase BSY240_673 PF16360 GTP-binding GTPase Middle Region BSY240_674 PF17209 Hfq protein BSY240_675 PF01063 Amino-transferase class IV BSY240_676 PF02254 TrkA-N domain BSY240_676 PF02080 TrkA-C domain BSY240_677 PF00158 Sigma-54 interaction domain BSY240_677 PF00072 Response regulator receiver domain BSY240_677 PF02954 Bacterial regulatory protein, Fis family BSY240_678 PF00989 PAS fold BSY240_678 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_678 PF00672 HAMP domain BSY240_678 PF00512 His Kinase A (phospho-acceptor) domain BSY240_679 PF00072 Response regulator receiver domain BSY240_679 PF02954 Bacterial regulatory protein, Fis family BSY240_679 PF00158 Sigma-54 interaction domain BSY240_68 PF00294 pfkB family carbohydrate kinase BSY240_680 PF00512 His Kinase A (phospho-acceptor) domain BSY240_680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_680 PF00989 PAS fold BSY240_681 PF01207 Dihydrouridine synthase (Dus) BSY240_682 PF02542 YgbB family BSY240_682 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BSY240_684 PF02464 Competence-damaged protein BSY240_686 PF01381 Helix-turn-helix BSY240_687 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BSY240_687 PF04055 Radical SAM superfamily BSY240_689 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSY240_689 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_69 PF03437 BtpA family BSY240_692 PF02817 e3 binding domain BSY240_692 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSY240_692 PF00364 Biotin-requiring enzyme BSY240_693 PF00364 Biotin-requiring enzyme BSY240_693 PF02780 Transketolase, C-terminal domain BSY240_693 PF02779 Transketolase, pyrimidine binding domain BSY240_694 PF00676 Dehydrogenase E1 component BSY240_696 PF00113 Enolase, C-terminal TIM barrel domain BSY240_696 PF03952 Enolase, N-terminal domain BSY240_697 PF00793 DAHP synthetase I family BSY240_7 PF00171 Aldehyde dehydrogenase family BSY240_701 PF00717 Peptidase S24-like BSY240_701 PF01726 LexA DNA binding domain BSY240_702 PF00285 Citrate synthase, C-terminal domain BSY240_704 PF02885 Glycosyl transferase family, helical bundle domain BSY240_704 PF00591 Glycosyl transferase family, a/b domain BSY240_705 PF00218 Indole-3-glycerol phosphate synthase BSY240_706 PF01967 MoaC family BSY240_707 PF03454 MoeA C-terminal region (domain IV) BSY240_707 PF00994 Probable molybdopterin binding domain BSY240_707 PF03453 MoeA N-terminal region (domain I and II) BSY240_708 PF00117 Glutamine amidotransferase class-I BSY240_708 PF06418 CTP synthase N-terminus BSY240_709 PF03840 Preprotein translocase SecG subunit BSY240_71 PF01546 Peptidase family M20/M25/M40 BSY240_71 PF07687 Peptidase dimerisation domain BSY240_710 PF00121 Triosephosphate isomerase BSY240_712 PF00204 DNA gyrase B BSY240_712 PF00986 DNA gyrase B subunit, carboxyl terminus BSY240_712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSY240_712 PF01751 Toprim domain BSY240_713 PF01594 AI-2E family transporter BSY240_717 PF00881 Nitroreductase family BSY240_72 PF11972 HTH DNA binding domain BSY240_72 PF07756 Protein of unknown function (DUF1612) BSY240_720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSY240_720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSY240_720 PF02824 TGS domain BSY240_720 PF03129 Anticodon binding domain BSY240_722 PF01809 Putative membrane protein insertion efficiency factor BSY240_724 PF01227 GTP cyclohydrolase I BSY240_725 PF01502 Phosphoribosyl-AMP cyclohydrolase BSY240_726 PF01734 Patatin-like phospholipase BSY240_727 PF00571 CBS domain BSY240_727 PF00478 IMP dehydrogenase / GMP reductase domain BSY240_73 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_73 PF17202 Single cache domain 3 BSY240_73 PF00672 HAMP domain BSY240_732 PF00768 D-alanyl-D-alanine carboxypeptidase BSY240_732 PF07943 Penicillin-binding protein 5, C-terminal domain BSY240_734 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_735 PF01475 Ferric uptake regulator family BSY240_736 PF00950 ABC 3 transport family BSY240_737 PF00005 ABC transporter BSY240_738 PF01297 Zinc-uptake complex component A periplasmic BSY240_739 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSY240_739 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSY240_740 PF02684 Lipid-A-disaccharide synthetase BSY240_741 PF06230 LpxI C-terminal domain BSY240_741 PF17930 LpxI N-terminal domain BSY240_742 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BSY240_742 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_743 PF07977 FabA-like domain BSY240_744 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_744 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BSY240_745 PF01103 Surface antigen BSY240_745 PF07244 Surface antigen variable number repeat BSY240_746 PF02163 Peptidase family M50 BSY240_746 PF17820 PDZ domain BSY240_748 PF01255 Putative undecaprenyl diphosphate synthase BSY240_749 PF01765 Ribosome recycling factor BSY240_75 PF07732 Multicopper oxidase BSY240_75 PF07731 Multicopper oxidase BSY240_75 PF00394 Multicopper oxidase BSY240_750 PF00696 Amino acid kinase family BSY240_751 PF00889 Elongation factor TS BSY240_752 PF00318 Ribosomal protein S2 BSY240_757 PF01230 HIT domain BSY240_76 PF04945 YHS domain BSY240_761 PF02861 Clp amino terminal domain, pathogenicity island component BSY240_761 PF10431 C-terminal, D2-small domain, of ClpB protein BSY240_761 PF07724 AAA domain (Cdc48 subfamily) BSY240_761 PF17871 AAA lid domain BSY240_761 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_762 PF02617 ATP-dependent Clp protease adaptor protein ClpS BSY240_765 PF00132 Bacterial transferase hexapeptide (six repeats) BSY240_765 PF06426 Serine acetyltransferase, N-terminal BSY240_766 PF00378 Enoyl-CoA hydratase/isomerase BSY240_767 PF00561 alpha/beta hydrolase fold BSY240_769 PF01494 FAD binding domain BSY240_770 PF01053 Cys/Met metabolism PLP-dependent enzyme BSY240_771 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSY240_772 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_773 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_774 PF00005 ABC transporter BSY240_780 PF00313 'Cold-shock' DNA-binding domain BSY240_786 PF01368 DHH family BSY240_786 PF17768 RecJ OB domain BSY240_786 PF02272 DHHA1 domain BSY240_788 PF00742 Homoserine dehydrogenase BSY240_788 PF03447 Homoserine dehydrogenase, NAD binding domain BSY240_788 PF01842 ACT domain BSY240_789 PF00155 Aminotransferase class I and II BSY240_791 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BSY240_792 PF17746 SfsA N-terminal OB domain BSY240_792 PF03749 Sugar fermentation stimulation protein RE domain BSY240_793 PF00557 Metallopeptidase family M24 BSY240_794 PF04002 RadC-like JAB domain BSY240_795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSY240_795 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSY240_797 PF12706 Beta-lactamase superfamily domain BSY240_798 PF05697 Bacterial trigger factor protein (TF) BSY240_798 PF05698 Bacterial trigger factor protein (TF) C-terminus BSY240_798 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSY240_8 PF02830 V4R domain BSY240_8 PF06505 Activator of aromatic catabolism BSY240_8 PF00158 Sigma-54 interaction domain BSY240_8 PF02954 Bacterial regulatory protein, Fis family BSY240_80 PF07732 Multicopper oxidase BSY240_803 PF01156 Inosine-uridine preferring nucleoside hydrolase BSY240_804 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_806 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_807 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSY240_808 PF02570 Precorrin-8X methylmutase BSY240_810 PF01903 CbiX BSY240_811 PF01925 Sulfite exporter TauE/SafE BSY240_812 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BSY240_814 PF02514 CobN/Magnesium Chelatase BSY240_815 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSY240_815 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSY240_816 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BSY240_82 PF00563 EAL domain BSY240_82 PF00990 Diguanylate cyclase, GGDEF domain BSY240_82 PF13188 PAS domain BSY240_82 PF03707 Bacterial signalling protein N terminal repeat BSY240_820 PF13419 Haloacid dehalogenase-like hydrolase BSY240_821 PF00849 RNA pseudouridylate synthase BSY240_821 PF01479 S4 domain BSY240_822 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BSY240_827 PF01571 Aminomethyltransferase folate-binding domain BSY240_827 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSY240_828 PF01597 Glycine cleavage H-protein BSY240_829 PF02347 Glycine cleavage system P-protein BSY240_835 PF00196 Bacterial regulatory proteins, luxR family BSY240_835 PF03472 Autoinducer binding domain BSY240_838 PF01521 Iron-sulphur cluster biosynthesis BSY240_839 PF00296 Luciferase-like monooxygenase BSY240_84 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_84 PF00672 HAMP domain BSY240_840 PF00857 Isochorismatase family BSY240_841 PF01042 Endoribonuclease L-PSP BSY240_842 PF12146 Serine aminopeptidase, S33 BSY240_843 PF01613 Flavin reductase like domain BSY240_844 PF01883 Iron-sulfur cluster assembly protein BSY240_845 PF00266 Aminotransferase class-V BSY240_846 PF01458 Uncharacterized protein family (UPF0051) BSY240_847 PF00005 ABC transporter BSY240_849 PF01458 Uncharacterized protein family (UPF0051) BSY240_850 PF00266 Aminotransferase class-V BSY240_851 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BSY240_854 PF03702 Anhydro-N-acetylmuramic acid kinase BSY240_856 PF00579 tRNA synthetases class I (W and Y) BSY240_858 PF01134 Glucose inhibited division protein A BSY240_86 PF01814 Hemerythrin HHE cation binding domain BSY240_86 PF04405 Domain of Unknown function (DUF542) BSY240_862 PF02355 Protein export membrane protein BSY240_862 PF07549 SecD/SecF GG Motif BSY240_863 PF02699 Preprotein translocase subunit BSY240_865 PF01551 Peptidase family M23 BSY240_865 PF01476 LysM domain BSY240_867 PF01975 Survival protein SurE BSY240_868 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSY240_868 PF02403 Seryl-tRNA synthetase N-terminal domain BSY240_869 PF00902 Sec-independent protein translocase protein (TatC) BSY240_870 PF02416 mttA/Hcf106 family BSY240_871 PF02416 mttA/Hcf106 family BSY240_872 PF00005 ABC transporter BSY240_872 PF08402 TOBE domain BSY240_873 PF04079 Segregation and condensation complex subunit ScpB BSY240_874 PF02616 Segregation and condensation protein ScpA BSY240_875 PF00933 Glycosyl hydrolase family 3 N terminal domain BSY240_878 PF05746 DALR anticodon binding domain BSY240_878 PF00750 tRNA synthetases class I (R) BSY240_878 PF03485 Arginyl tRNA synthetase N terminal domain BSY240_879 PF01966 HD domain BSY240_879 PF13286 Phosphohydrolase-associated domain BSY240_880 PF01521 Iron-sulphur cluster biosynthesis BSY240_882 PF08238 Sel1 repeat BSY240_885 PF10458 Valyl tRNA synthetase tRNA binding arm BSY240_885 PF00133 tRNA synthetases class I (I, L, M and V) BSY240_885 PF08264 Anticodon-binding domain of tRNA BSY240_893 PF00875 DNA photolyase BSY240_893 PF03441 FAD binding domain of DNA photolyase BSY240_894 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BSY240_895 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BSY240_898 PF00291 Pyridoxal-phosphate dependent enzyme BSY240_899 PF02272 DHHA1 domain BSY240_899 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSY240_899 PF01411 tRNA synthetases class II (A) BSY240_90 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BSY240_900 PF00581 Rhodanese-like domain BSY240_903 PF00892 EamA-like transporter family BSY240_905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BSY240_905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BSY240_906 PF01037 Lrp/AsnC ligand binding domain BSY240_909 PF02872 5'-nucleotidase, C-terminal domain BSY240_909 PF00149 Calcineurin-like phosphoesterase BSY240_91 PF02441 Flavoprotein BSY240_910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_910 PF03466 LysR substrate binding domain BSY240_911 PF02525 Flavodoxin-like fold BSY240_912 PF00563 EAL domain BSY240_912 PF00990 Diguanylate cyclase, GGDEF domain BSY240_912 PF03707 Bacterial signalling protein N terminal repeat BSY240_912 PF13188 PAS domain BSY240_914 PF00291 Pyridoxal-phosphate dependent enzyme BSY240_914 PF00585 C-terminal regulatory domain of Threonine dehydratase BSY240_916 PF02386 Cation transport protein BSY240_918 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_919 PF00005 ABC transporter BSY240_920 PF09084 NMT1/THI5 like BSY240_923 PF03358 NADPH-dependent FMN reductase BSY240_924 PF00994 Probable molybdopterin binding domain BSY240_924 PF18146 Damage-inducible protein CinA KH domain BSY240_924 PF02464 Competence-damaged protein BSY240_926 PF00156 Phosphoribosyl transferase domain BSY240_928 PF07995 Glucose / Sorbosone dehydrogenase BSY240_932 PF06724 Domain of Unknown Function (DUF1206) BSY240_933 PF13460 NAD(P)H-binding BSY240_934 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSY240_934 PF00672 HAMP domain BSY240_935 PF02867 Ribonucleotide reductase, barrel domain BSY240_935 PF08471 Class II vitamin B12-dependent ribonucleotide reductase BSY240_94 PF00005 ABC transporter BSY240_941 PF01593 Flavin containing amine oxidoreductase BSY240_942 PF00990 Diguanylate cyclase, GGDEF domain BSY240_942 PF03707 Bacterial signalling protein N terminal repeat BSY240_942 PF00563 EAL domain BSY240_943 PF16193 AAA C-terminal domain BSY240_943 PF12002 MgsA AAA+ ATPase C terminal BSY240_943 PF00004 ATPase family associated with various cellular activities (AAA) BSY240_944 PF00595 PDZ domain BSY240_947 PF00042 Globin BSY240_947 PF00175 Oxidoreductase NAD-binding domain BSY240_947 PF00970 Oxidoreductase FAD-binding domain BSY240_948 PF13435 Cytochrome c554 and c-prime BSY240_949 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSY240_949 PF03466 LysR substrate binding domain BSY240_95 PF00528 Binding-protein-dependent transport system inner membrane component BSY240_951 PF00596 Class II Aldolase and Adducin N-terminal domain BSY240_952 PF00920 Dehydratase family BSY240_954 PF00174 Oxidoreductase molybdopterin binding domain BSY240_955 PF01794 Ferric reductase like transmembrane component BSY240_959 PF05675 Protein of unknown function (DUF817) BSY240_960 PF03795 YCII-related domain BSY240_962 PF04542 Sigma-70 region 2 BSY240_962 PF08281 Sigma-70, region 4 BSY240_964 PF01196 Ribosomal protein L17 BSY240_965 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BSY240_965 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BSY240_965 PF01000 RNA polymerase Rpb3/RpoA insert domain BSY240_966 PF00411 Ribosomal protein S11 BSY240_967 PF00416 Ribosomal protein S13/S18 BSY240_968 PF05191 Adenylate kinase, active site lid BSY240_969 PF00344 SecY translocase BSY240_970 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BSY240_971 PF00327 Ribosomal protein L30p/L7e BSY240_972 PF03719 Ribosomal protein S5, C-terminal domain BSY240_972 PF00333 Ribosomal protein S5, N-terminal domain BSY240_973 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BSY240_974 PF00347 Ribosomal protein L6 BSY240_975 PF00410 Ribosomal protein S8 BSY240_976 PF00253 Ribosomal protein S14p/S29e BSY240_977 PF00281 Ribosomal protein L5 BSY240_977 PF00673 ribosomal L5P family C-terminus BSY240_978 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BSY240_978 PF00467 KOW motif BSY240_979 PF00238 Ribosomal protein L14p/L23e BSY240_980 PF00366 Ribosomal protein S17 BSY240_981 PF00831 Ribosomal L29 protein BSY240_982 PF00252 Ribosomal protein L16p/L10e BSY240_983 PF07650 KH domain BSY240_983 PF00189 Ribosomal protein S3, C-terminal domain BSY240_984 PF00237 Ribosomal protein L22p/L17e BSY240_985 PF00203 Ribosomal protein S19 BSY240_986 PF03947 Ribosomal Proteins L2, C-terminal domain BSY240_986 PF00181 Ribosomal Proteins L2, RNA binding domain BSY240_987 PF00276 Ribosomal protein L23 BSY240_988 PF00573 Ribosomal protein L4/L1 family BSY240_989 PF00297 Ribosomal protein L3 BSY240_990 PF00338 Ribosomal protein S10p/S20e BSY240_991 PF03144 Elongation factor Tu domain 2 BSY240_991 PF00009 Elongation factor Tu GTP binding domain BSY240_991 PF03143 Elongation factor Tu C-terminal domain BSY240_992 PF00679 Elongation factor G C-terminus BSY240_992 PF03144 Elongation factor Tu domain 2 BSY240_992 PF00009 Elongation factor Tu GTP binding domain BSY240_992 PF03764 Elongation factor G, domain IV BSY240_992 PF14492 Elongation Factor G, domain II BSY240_993 PF00177 Ribosomal protein S7p/S5e BSY240_994 PF00164 Ribosomal protein S12/S23 BSY240_996 PF00623 RNA polymerase Rpb1, domain 2 BSY240_996 PF04997 RNA polymerase Rpb1, domain 1 BSY240_996 PF04998 RNA polymerase Rpb1, domain 5 BSY240_996 PF05000 RNA polymerase Rpb1, domain 4 BSY240_996 PF04983 RNA polymerase Rpb1, domain 3 BSY240_997 PF04561 RNA polymerase Rpb2, domain 2 BSY240_997 PF04565 RNA polymerase Rpb2, domain 3 BSY240_997 PF04563 RNA polymerase beta subunit BSY240_997 PF10385 RNA polymerase beta subunit external 1 domain BSY240_997 PF04560 RNA polymerase Rpb2, domain 7 BSY240_997 PF00562 RNA polymerase Rpb2, domain 6 BSY240_998 PF16320 Ribosomal protein L7/L12 dimerisation domain BSY240_998 PF00542 Ribosomal protein L7/L12 C-terminal domain BSY240_999 PF00466 Ribosomal protein L10