locus-tag class description At15955_00010 PF11638 DnaA N-terminal domain At15955_00010 PF08299 Bacterial dnaA protein helix-turn-helix At15955_00010 PF00308 Bacterial dnaA protein At15955_00020 PF06969 HemN C-terminal domain At15955_00020 PF04055 Radical SAM superfamily At15955_00030 PF01725 Ham1 family At15955_00040 PF03725 3' exoribonuclease family, domain 2 At15955_00040 PF01138 3' exoribonuclease family, domain 1 At15955_00050 PF01628 HrcA protein C terminal domain At15955_00060 PF01025 GrpE At15955_00070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 At15955_00080 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus At15955_00080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein At15955_00090 PF00309 Sigma-54 factor, Activator interacting domain (AID) At15955_00090 PF04963 Sigma-54 factor, core binding domain At15955_00090 PF04552 Sigma-54, DNA binding domain At15955_00100 PF00005 ABC transporter At15955_00110 PF03968 OstA-like protein At15955_00130 PF01343 Peptidase family S49 At15955_00140 PF00216 Bacterial DNA-binding protein At15955_00160 PF01170 Putative RNA methylase family UPF0020 At15955_00160 PF02926 THUMP domain At15955_00160 PF10672 S-adenosylmethionine-dependent methyltransferase At15955_00170 PF08032 RNA 2'-O ribose methyltransferase substrate binding At15955_00170 PF00588 SpoU rRNA Methylase family At15955_00180 PF01252 Signal peptidase (SPase) II At15955_00190 PF00512 His Kinase A (phospho-acceptor) domain At15955_00190 PF01627 Hpt domain At15955_00190 PF00072 Response regulator receiver domain At15955_00190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At15955_00190 PF00672 HAMP domain At15955_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_00210 PF00488 MutS domain V At15955_00210 PF05190 MutS family domain IV At15955_00210 PF05192 MutS domain III At15955_00210 PF05188 MutS domain II At15955_00210 PF01624 MutS domain I At15955_00220 PF08335 GlnD PII-uridylyltransferase At15955_00220 PF01966 HD domain At15955_00220 PF01909 Nucleotidyltransferase domain At15955_00220 PF01842 ACT domain At15955_00230 PF03023 Lipid II flippase MurJ At15955_00250 PF00579 tRNA synthetases class I (W and Y) At15955_00270 PF01106 NifU-like domain At15955_00280 PF00814 Glycoprotease family At15955_00290 PF00814 Glycoprotease family At15955_00290 PF00583 Acetyltransferase (GNAT) family At15955_00300 PF01475 Ferric uptake regulator family At15955_00310 PF01553 Acyltransferase At15955_00320 PF00919 Uncharacterized protein family UPF0004 At15955_00320 PF04055 Radical SAM superfamily At15955_00320 PF01938 TRAM domain At15955_00330 PF02562 PhoH-like protein At15955_00340 PF02130 Uncharacterized protein family UPF0054 At15955_00350 PF00571 CBS domain At15955_00350 PF03471 Transporter associated domain At15955_00360 PF00795 Carbon-nitrogen hydrolase At15955_00370 PF01381 Helix-turn-helix At15955_00380 PF02773 S-adenosylmethionine synthetase, C-terminal domain At15955_00380 PF02772 S-adenosylmethionine synthetase, central domain At15955_00380 PF00438 S-adenosylmethionine synthetase, N-terminal domain At15955_00390 PF02390 Putative methyltransferase At15955_00400 PF00294 pfkB family carbohydrate kinase At15955_00410 PF02646 RmuC family At15955_00420 PF01327 Polypeptide deformylase At15955_00430 PF02911 Formyl transferase, C-terminal domain At15955_00430 PF00551 Formyl transferase At15955_00440 PF01416 tRNA pseudouridine synthase At15955_00460 PF01546 Peptidase family M20/M25/M40 At15955_00460 PF07687 Peptidase dimerisation domain At15955_00470 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_00470 PF14602 Hexapeptide repeat of succinyl-transferase At15955_00470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal At15955_00490 PF00672 HAMP domain At15955_00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_00500 PF01156 Inosine-uridine preferring nucleoside hydrolase At15955_00510 PF00011 Hsp20/alpha crystallin family At15955_00560 PF00696 Amino acid kinase family At15955_00580 PF01926 50S ribosome-binding GTPase At15955_00590 PF14849 YidC periplasmic domain At15955_00590 PF02096 60Kd inner membrane protein At15955_00600 PF00825 Ribonuclease P At15955_00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_00610 PF00672 HAMP domain At15955_00620 PF00512 His Kinase A (phospho-acceptor) domain At15955_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_00630 PF01209 ubiE/COQ5 methyltransferase family At15955_00640 PF00005 ABC transporter At15955_00640 PF17912 MalK OB fold domain At15955_00650 PF00528 Binding-protein-dependent transport system inner membrane component At15955_00660 PF00528 Binding-protein-dependent transport system inner membrane component At15955_00680 PF00149 Calcineurin-like phosphoesterase At15955_00690 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain At15955_00690 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain At15955_00710 PF05544 Proline racemase At15955_00720 PF01979 Amidohydrolase family At15955_00730 PF00156 Phosphoribosyl transferase domain At15955_00740 PF00294 pfkB family carbohydrate kinase At15955_00770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At15955_00770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At15955_00780 PF00342 Phosphoglucose isomerase At15955_00790 PF00501 AMP-binding enzyme At15955_00790 PF13193 AMP-binding enzyme C-terminal domain At15955_00800 PF00005 ABC transporter At15955_00800 PF08402 TOBE domain At15955_00820 PF00528 Binding-protein-dependent transport system inner membrane component At15955_00830 PF07715 TonB-dependent Receptor Plug Domain At15955_00830 PF00593 TonB dependent receptor At15955_00870 PF01679 Proteolipid membrane potential modulator At15955_00900 PF03976 Polyphosphate kinase 2 (PPK2) At15955_00910 PF00989 PAS fold At15955_00910 PF00512 His Kinase A (phospho-acceptor) domain At15955_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_00910 PF16736 Single Cache-like At15955_00920 PF12849 PBP superfamily domain At15955_00930 PF00528 Binding-protein-dependent transport system inner membrane component At15955_00940 PF00528 Binding-protein-dependent transport system inner membrane component At15955_00950 PF00005 ABC transporter At15955_00960 PF01895 PhoU domain At15955_00970 PF00486 Transcriptional regulatory protein, C terminal At15955_00970 PF00072 Response regulator receiver domain At15955_00990 PF00202 Aminotransferase class-III At15955_01000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At15955_01000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At15955_01010 PF01430 Hsp33 protein At15955_01020 PF04379 ApaG domain At15955_01030 PF01053 Cys/Met metabolism PLP-dependent enzyme At15955_01040 PF00692 dUTPase At15955_01050 PF00230 Major intrinsic protein At15955_01130 PF00072 Response regulator receiver domain At15955_01130 PF00196 Bacterial regulatory proteins, luxR family At15955_01150 PF01180 Dihydroorotate dehydrogenase At15955_01220 PF02082 Transcriptional regulator At15955_01230 PF00270 DEAD/DEAH box helicase At15955_01230 PF00271 Helicase conserved C-terminal domain At15955_01230 PF08494 DEAD/H associated At15955_01270 PF01925 Sulfite exporter TauE/SafE At15955_01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_01290 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_01290 PF12806 Acetyl-CoA dehydrogenase C-terminal like At15955_01300 PF00108 Thiolase, N-terminal domain At15955_01300 PF02803 Thiolase, C-terminal domain At15955_01310 PF00378 Enoyl-CoA hydratase/isomerase At15955_01310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At15955_01310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At15955_01340 PF03334 Na+/H+ antiporter subunit At15955_01350 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At15955_01360 PF01899 Na+/H+ ion antiporter subunit At15955_01370 PF00361 Proton-conducting membrane transporter At15955_01380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At15955_01390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At15955_01390 PF13244 Domain of unknown function (DUF4040) At15955_01390 PF00361 Proton-conducting membrane transporter At15955_01390 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At15955_01410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_01440 PF01584 CheW-like domain At15955_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_01440 PF01627 Hpt domain At15955_01440 PF02895 Signal transducing histidine kinase, homodimeric domain At15955_01450 PF01739 CheR methyltransferase, SAM binding domain At15955_01450 PF03705 CheR methyltransferase, all-alpha domain At15955_01460 PF00072 Response regulator receiver domain At15955_01460 PF01339 CheB methylesterase At15955_01470 PF00072 Response regulator receiver domain At15955_01480 PF03975 CheD chemotactic sensory transduction At15955_01500 PF08345 Flagellar M-ring protein C-terminal At15955_01500 PF01514 Secretory protein of YscJ/FliF family At15955_01510 PF00196 Bacterial regulatory proteins, luxR family At15955_01510 PF03472 Autoinducer binding domain At15955_01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_01530 PF00672 HAMP domain At15955_01540 PF00072 Response regulator receiver domain At15955_01540 PF00672 HAMP domain At15955_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_01540 PF00512 His Kinase A (phospho-acceptor) domain At15955_01540 PF01627 Hpt domain At15955_01550 PF01741 Large-conductance mechanosensitive channel, MscL At15955_01560 PF00155 Aminotransferase class I and II At15955_01570 PF01370 NAD dependent epimerase/dehydratase family At15955_01590 PF03884 DNA gyrase inhibitor YacG At15955_01600 PF02545 Maf-like protein At15955_01610 PF01176 Translation initiation factor 1A / IF-1 At15955_01630 PF06793 Uncharacterised protein family (UPF0262) At15955_01640 PF00815 Histidinol dehydrogenase At15955_01660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At15955_01680 PF00669 Bacterial flagellin N-terminal helical region At15955_01680 PF00700 Bacterial flagellin C-terminal helical region At15955_01690 PF00669 Bacterial flagellin N-terminal helical region At15955_01690 PF00700 Bacterial flagellin C-terminal helical region At15955_01700 PF00669 Bacterial flagellin N-terminal helical region At15955_01700 PF00700 Bacterial flagellin C-terminal helical region At15955_01710 PF00813 FliP family At15955_01730 PF02107 Flagellar L-ring protein At15955_01750 PF02119 Flagellar P-ring protein At15955_01760 PF13144 Chaperone for flagella basal body P-ring formation At15955_01770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At15955_01770 PF00460 Flagella basal body rod protein At15955_01780 PF02049 Flagellar hook-basal body complex protein FliE At15955_01790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At15955_01800 PF00460 Flagella basal body rod protein At15955_01820 PF18269 T3SS EscN ATPase C-terminal domain At15955_01820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At15955_01830 PF00460 Flagella basal body rod protein At15955_01830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At15955_01850 PF01618 MotA/TolQ/ExbB proton channel family At15955_01860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At15955_01870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At15955_01880 PF14841 FliG middle domain At15955_01880 PF14842 FliG N-terminal domain At15955_01880 PF01706 FliG C-terminal domain At15955_01890 PF01312 FlhB HrpN YscU SpaS Family At15955_01910 PF00669 Bacterial flagellin N-terminal helical region At15955_01910 PF00700 Bacterial flagellin C-terminal helical region At15955_01920 PF00486 Transcriptional regulatory protein, C terminal At15955_01930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At15955_01930 PF00460 Flagella basal body rod protein At15955_01930 PF07559 Flagellar basal body protein FlaE At15955_01970 PF07378 Flagellar protein FlbT At15955_01980 PF03963 Flagellar hook capping protein - N-terminal region At15955_01990 PF01313 Bacterial export proteins, family 3 At15955_02000 PF00771 FHIPEP family At15955_02010 PF01311 Bacterial export proteins, family 1 At15955_02080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain At15955_02080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain At15955_02090 PF00356 Bacterial regulatory proteins, lacI family At15955_02100 PF01547 Bacterial extracellular solute-binding protein At15955_02110 PF00528 Binding-protein-dependent transport system inner membrane component At15955_02120 PF00528 Binding-protein-dependent transport system inner membrane component At15955_02130 PF00128 Alpha amylase, catalytic domain At15955_02140 PF00005 ABC transporter At15955_02140 PF17912 MalK OB fold domain At15955_02140 PF03459 TOBE domain At15955_02170 PF00920 Dehydratase family At15955_02180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase At15955_02190 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At15955_02190 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At15955_02210 PF01266 FAD dependent oxidoreductase At15955_02220 PF00120 Glutamine synthetase, catalytic domain At15955_02270 PF00463 Isocitrate lyase family At15955_02280 PF09856 Predicted transcriptional regulator (DUF2083) At15955_02280 PF01381 Helix-turn-helix At15955_02280 PF06114 IrrE N-terminal-like domain At15955_02290 PF13416 Bacterial extracellular solute-binding protein At15955_02300 PF00005 ABC transporter At15955_02300 PF08402 TOBE domain At15955_02310 PF00528 Binding-protein-dependent transport system inner membrane component At15955_02320 PF00528 Binding-protein-dependent transport system inner membrane component At15955_02340 PF00512 His Kinase A (phospho-acceptor) domain At15955_02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_02340 PF13426 PAS domain At15955_02340 PF00989 PAS fold At15955_02340 PF13188 PAS domain At15955_02360 PF02541 Ppx/GppA phosphatase family At15955_02370 PF01728 FtsJ-like methyltransferase At15955_02380 PF07690 Major Facilitator Superfamily At15955_02390 PF00753 Metallo-beta-lactamase superfamily At15955_02400 PF00478 IMP dehydrogenase / GMP reductase domain At15955_02400 PF00571 CBS domain At15955_02420 PF00107 Zinc-binding dehydrogenase At15955_02420 PF08240 Alcohol dehydrogenase GroES-like domain At15955_02430 PF01738 Dienelactone hydrolase family At15955_02440 PF00994 Probable molybdopterin binding domain At15955_02450 PF00288 GHMP kinases N terminal domain At15955_02450 PF08544 GHMP kinases C terminal At15955_02470 PF00348 Polyprenyl synthetase At15955_02500 PF01343 Peptidase family S49 At15955_02500 PF06965 Na+/H+ antiporter 1 At15955_02520 PF02091 Glycyl-tRNA synthetase alpha subunit At15955_02530 PF04011 LemA family At15955_02540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At15955_02560 PF02092 Glycyl-tRNA synthetase beta subunit At15955_02560 PF05746 DALR anticodon binding domain At15955_02590 PF04463 Protein of unknown function (DUF523) At15955_02600 PF00672 HAMP domain At15955_02600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_02620 PF02844 Phosphoribosylglycinamide synthetase, N domain At15955_02620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain At15955_02620 PF02843 Phosphoribosylglycinamide synthetase, C domain At15955_02630 PF09371 Tex-like protein N-terminal domain At15955_02630 PF00575 S1 RNA binding domain At15955_02630 PF16921 Tex protein YqgF-like domain At15955_02630 PF17674 HHH domain At15955_02660 PF01040 UbiA prenyltransferase family At15955_02690 PF03466 LysR substrate binding domain At15955_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_02710 PF04107 Glutamate-cysteine ligase family 2(GCS2) At15955_02720 PF04452 RNA methyltransferase At15955_02730 PF01384 Phosphate transporter family At15955_02750 PF05116 Sucrose-6F-phosphate phosphohydrolase At15955_02760 PF13439 Glycosyltransferase Family 4 At15955_02760 PF00534 Glycosyl transferases group 1 At15955_02770 PF00392 Bacterial regulatory proteins, gntR family At15955_02770 PF07729 FCD domain At15955_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_02790 PF03466 LysR substrate binding domain At15955_02800 PF02913 FAD linked oxidases, C-terminal domain At15955_02800 PF01565 FAD binding domain At15955_02820 PF01565 FAD binding domain At15955_02830 PF02754 Cysteine-rich domain At15955_02830 PF13183 4Fe-4S dicluster domain At15955_02850 PF03734 L,D-transpeptidase catalytic domain At15955_02850 PF17969 L,D-transpeptidase C-terminal domain At15955_02860 PF03352 Methyladenine glycosylase At15955_02880 PF03601 Conserved hypothetical protein 698 At15955_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_02890 PF03466 LysR substrate binding domain At15955_02930 PF03129 Anticodon binding domain At15955_02930 PF13393 Histidyl-tRNA synthetase At15955_02950 PF13393 Histidyl-tRNA synthetase At15955_02960 PF01634 ATP phosphoribosyltransferase At15955_02970 PF07681 DoxX At15955_02990 PF00118 TCP-1/cpn60 chaperonin family At15955_03000 PF00166 Chaperonin 10 Kd subunit At15955_03020 PF01687 Riboflavin kinase At15955_03020 PF06574 FAD synthetase At15955_03030 PF00133 tRNA synthetases class I (I, L, M and V) At15955_03030 PF08264 Anticodon-binding domain of tRNA At15955_03050 PF14437 MafB19-like deaminase At15955_03060 PF01479 S4 domain At15955_03060 PF00849 RNA pseudouridylate synthase At15955_03080 PF01734 Patatin-like phospholipase At15955_03090 PF00999 Sodium/hydrogen exchanger family At15955_03090 PF02254 TrkA-N domain At15955_03100 PF01523 Putative modulator of DNA gyrase At15955_03130 PF00534 Glycosyl transferases group 1 At15955_03130 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) At15955_03150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase At15955_03180 PF08676 MutL C terminal dimerisation domain At15955_03180 PF01119 DNA mismatch repair protein, C-terminal domain At15955_03190 PF00989 PAS fold At15955_03190 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_03190 PF00072 Response regulator receiver domain At15955_03190 PF00512 His Kinase A (phospho-acceptor) domain At15955_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_03190 PF01627 Hpt domain At15955_03200 PF13188 PAS domain At15955_03200 PF00990 Diguanylate cyclase, GGDEF domain At15955_03200 PF00563 EAL domain At15955_03200 PF03707 Bacterial signalling protein N terminal repeat At15955_03210 PF08450 SMP-30/Gluconolactonase/LRE-like region At15955_03220 PF01081 KDPG and KHG aldolase At15955_03230 PF05035 2-keto-3-deoxy-galactonokinase At15955_03250 PF01614 Bacterial transcriptional regulator At15955_03250 PF09339 IclR helix-turn-helix domain At15955_03260 PF00196 Bacterial regulatory proteins, luxR family At15955_03260 PF03472 Autoinducer binding domain At15955_03280 PF10609 NUBPL iron-transfer P-loop NTPase At15955_03290 PF01544 CorA-like Mg2+ transporter protein At15955_03300 PF02705 K+ potassium transporter At15955_03320 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter At15955_03330 PF00119 ATP synthase A chain At15955_03340 PF00137 ATP synthase subunit C At15955_03350 PF00430 ATP synthase B/B' CF(0) At15955_03360 PF00430 ATP synthase B/B' CF(0) At15955_03380 PF01351 Ribonuclease HII At15955_03410 PF02913 FAD linked oxidases, C-terminal domain At15955_03410 PF01565 FAD binding domain At15955_03420 PF03481 Putative GTP-binding controlling metal-binding At15955_03420 PF01300 Telomere recombination At15955_03440 PF00355 Rieske [2Fe-2S] domain At15955_03440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At15955_03450 PF00111 2Fe-2S iron-sulfur cluster binding domain At15955_03450 PF00175 Oxidoreductase NAD-binding domain At15955_03450 PF00970 Oxidoreductase FAD-binding domain At15955_03460 PF07886 BA14K-like protein At15955_03470 PF07886 BA14K-like protein At15955_03490 PF12806 Acetyl-CoA dehydrogenase C-terminal like At15955_03490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_03490 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_03490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_03520 PF05958 tRNA (Uracil-5-)-methyltransferase At15955_03530 PF01479 S4 domain At15955_03530 PF01728 FtsJ-like methyltransferase At15955_03540 PF00672 HAMP domain At15955_03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_03590 PF02780 Transketolase, C-terminal domain At15955_03590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase At15955_03590 PF02779 Transketolase, pyrimidine binding domain At15955_03600 PF02678 Pirin At15955_03600 PF05726 Pirin C-terminal cupin domain At15955_03610 PF02609 Exonuclease VII small subunit At15955_03620 PF00850 Histone deacetylase domain At15955_03630 PF02632 BioY family At15955_03640 PF02361 Cobalt transport protein At15955_03650 PF00005 ABC transporter At15955_03660 PF06224 Winged helix DNA-binding domain At15955_03680 PF01264 Chorismate synthase At15955_03700 PF00300 Histidine phosphatase superfamily (branch 1) At15955_03720 PF00226 DnaJ domain At15955_03720 PF00684 DnaJ central domain At15955_03720 PF01556 DnaJ C terminal domain At15955_03740 PF01243 Pyridoxamine 5'-phosphate oxidase At15955_03740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region At15955_03780 PF13419 Haloacid dehalogenase-like hydrolase At15955_03800 PF01523 Putative modulator of DNA gyrase At15955_03830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At15955_03830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At15955_03840 PF00115 Cytochrome C and Quinol oxidase polypeptide I At15955_03850 PF01040 UbiA prenyltransferase family At15955_03870 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 At15955_03880 PF00510 Cytochrome c oxidase subunit III At15955_03900 PF02104 SURF1 family At15955_03910 PF02401 LytB protein At15955_03920 PF01636 Phosphotransferase enzyme family At15955_03930 PF00075 RNase H At15955_03960 PF08534 Redoxin At15955_03960 PF00462 Glutaredoxin At15955_03980 PF02622 Uncharacterized ACR, COG1678 At15955_04000 PF15887 Putative zinc-binding metallo-peptidase At15955_04000 PF10005 zinc-ribbon domain At15955_04010 PF00563 EAL domain At15955_04010 PF13185 GAF domain At15955_04010 PF00990 Diguanylate cyclase, GGDEF domain At15955_04020 PF13302 Acetyltransferase (GNAT) domain At15955_04030 PF05193 Peptidase M16 inactive domain At15955_04030 PF00675 Insulinase (Peptidase family M16) At15955_04040 PF00291 Pyridoxal-phosphate dependent enzyme At15955_04040 PF14821 Threonine synthase N terminus At15955_04060 PF13419 Haloacid dehalogenase-like hydrolase At15955_04100 PF01555 DNA methylase At15955_04100 PF18755 Restriction Enzyme Adenine Methylase Associated At15955_04120 PF00633 Helix-hairpin-helix motif At15955_04120 PF00730 HhH-GPD superfamily base excision DNA repair protein At15955_04120 PF14815 NUDIX domain At15955_04140 PF13462 Thioredoxin At15955_04150 PF02463 RecF/RecN/SMC N terminal domain At15955_04160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_04170 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain At15955_04170 PF02896 PEP-utilising enzyme, TIM barrel domain At15955_04170 PF00391 PEP-utilising enzyme, mobile domain At15955_04240 PF06039 Malate:quinone oxidoreductase (Mqo) At15955_04290 PF00009 Elongation factor Tu GTP binding domain At15955_04300 PF01507 Phosphoadenosine phosphosulfate reductase family At15955_04310 PF01507 Phosphoadenosine phosphosulfate reductase family At15955_04320 PF02082 Transcriptional regulator At15955_04340 PF00528 Binding-protein-dependent transport system inner membrane component At15955_04350 PF00528 Binding-protein-dependent transport system inner membrane component At15955_04360 PF00005 ABC transporter At15955_04360 PF12857 TOBE-like domain At15955_04380 PF00698 Acyl transferase domain At15955_04380 PF14765 Polyketide synthase dehydratase At15955_04380 PF00550 Phosphopantetheine attachment site At15955_04380 PF00107 Zinc-binding dehydrogenase At15955_04380 PF08240 Alcohol dehydrogenase GroES-like domain At15955_04380 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_04380 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_04380 PF16197 Ketoacyl-synthetase C-terminal extension At15955_04380 PF08659 KR domain At15955_04390 PF00563 EAL domain At15955_04390 PF12792 CSS motif domain associated with EAL At15955_04410 PF00440 Bacterial regulatory proteins, tetR family At15955_04410 PF13977 BetI-type transcriptional repressor, C-terminal At15955_04420 PF00171 Aldehyde dehydrogenase family At15955_04430 PF05199 GMC oxidoreductase At15955_04430 PF00732 GMC oxidoreductase At15955_04460 PF00654 Voltage gated chloride channel At15955_04510 PF01047 MarR family At15955_04520 PF07690 Major Facilitator Superfamily At15955_04540 PF04675 DNA ligase N terminus At15955_04540 PF04679 ATP dependent DNA ligase C terminal region At15955_04540 PF01068 ATP dependent DNA ligase domain At15955_04560 PF00403 Heavy-metal-associated domain At15955_04570 PF03734 L,D-transpeptidase catalytic domain At15955_04570 PF17969 L,D-transpeptidase C-terminal domain At15955_04580 PF03734 L,D-transpeptidase catalytic domain At15955_04580 PF17969 L,D-transpeptidase C-terminal domain At15955_04610 PF01047 MarR family At15955_04620 PF02566 OsmC-like protein At15955_04650 PF00005 ABC transporter At15955_04650 PF16326 ABC transporter C-terminal domain At15955_04650 PF12848 ABC transporter At15955_04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_04720 PF03466 LysR substrate binding domain At15955_04730 PF00106 short chain dehydrogenase At15955_04750 PF05872 Bacterial protein of unknown function (DUF853) At15955_04770 PF01638 HxlR-like helix-turn-helix At15955_04780 PF00106 short chain dehydrogenase At15955_04790 PF12833 Helix-turn-helix domain At15955_04800 PF01810 LysE type translocator At15955_04810 PF00248 Aldo/keto reductase family At15955_04850 PF01063 Amino-transferase class IV At15955_04860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_04860 PF00672 HAMP domain At15955_04900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At15955_04900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At15955_04930 PF01810 LysE type translocator At15955_04940 PF01322 Cytochrome C' At15955_04950 PF00034 Cytochrome c At15955_05010 PF09278 MerR, DNA binding At15955_05010 PF00376 MerR family regulatory protein At15955_05030 PF02583 Metal-sensitive transcriptional repressor At15955_05040 PF01545 Cation efflux family At15955_05070 PF00571 CBS domain At15955_05070 PF00005 ABC transporter At15955_05080 PF00528 Binding-protein-dependent transport system inner membrane component At15955_05100 PF00326 Prolyl oligopeptidase family At15955_05100 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At15955_05120 PF00701 Dihydrodipicolinate synthetase family At15955_05140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At15955_05140 PF12833 Helix-turn-helix domain At15955_05140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At15955_05140 PF02805 Metal binding domain of Ada At15955_05150 PF01594 AI-2E family transporter At15955_05160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_05190 PF03006 Haemolysin-III related At15955_05210 PF01810 LysE type translocator At15955_05220 PF01641 SelR domain At15955_05240 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At15955_05250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At15955_05280 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At15955_05290 PF03334 Na+/H+ antiporter subunit At15955_05300 PF05443 ROS/MUCR transcriptional regulator protein At15955_05330 PF02657 Fe-S metabolism associated domain At15955_05340 PF17264 Family of unknown function (DUF5330) At15955_05350 PF00512 His Kinase A (phospho-acceptor) domain At15955_05350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_05420 PF01546 Peptidase family M20/M25/M40 At15955_05420 PF07687 Peptidase dimerisation domain At15955_05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_05440 PF03466 LysR substrate binding domain At15955_05450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_05460 PF00905 Penicillin binding protein transpeptidase domain At15955_05460 PF00912 Transglycosylase At15955_05470 PF03692 Putative zinc- or iron-chelating domain At15955_05480 PF00905 Penicillin binding protein transpeptidase domain At15955_05510 PF09278 MerR, DNA binding At15955_05510 PF00376 MerR family regulatory protein At15955_05570 PF00251 Glycosyl hydrolases family 32 N-terminal domain At15955_05570 PF08244 Glycosyl hydrolases family 32 C terminal At15955_05580 PF13426 PAS domain At15955_05580 PF07536 HWE histidine kinase At15955_05580 PF08447 PAS fold At15955_05590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family At15955_05610 PF13404 AsnC-type helix-turn-helix domain At15955_05610 PF01037 Lrp/AsnC ligand binding domain At15955_05700 PF04860 Phage portal protein At15955_05880 PF00486 Transcriptional regulatory protein, C terminal At15955_05880 PF00072 Response regulator receiver domain At15955_05890 PF00512 His Kinase A (phospho-acceptor) domain At15955_05890 PF08521 Two-component sensor kinase N-terminal At15955_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_05920 PF03100 CcmE At15955_05930 PF01578 Cytochrome C assembly protein At15955_05930 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal At15955_05940 PF03918 Cytochrome C biogenesis protein At15955_05950 PF13180 PDZ domain At15955_05960 PF00072 Response regulator receiver domain At15955_05960 PF00486 Transcriptional regulatory protein, C terminal At15955_05970 PF00512 His Kinase A (phospho-acceptor) domain At15955_05970 PF08448 PAS fold At15955_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_05970 PF13426 PAS domain At15955_05970 PF00072 Response regulator receiver domain At15955_05980 PF04134 Protein of unknown function, DUF393 At15955_06000 PF03710 Glutamate-ammonia ligase adenylyltransferase At15955_06000 PF08335 GlnD PII-uridylyltransferase At15955_06010 PF00989 PAS fold At15955_06010 PF00512 His Kinase A (phospho-acceptor) domain At15955_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_06030 PF11940 Domain of unknown function (DUF3458) Ig-like fold At15955_06030 PF01433 Peptidase family M1 domain At15955_06030 PF17432 Domain of unknown function (DUF3458_C) ARM repeats At15955_06070 PF00012 Hsp70 protein At15955_06080 PF00990 Diguanylate cyclase, GGDEF domain At15955_06080 PF03707 Bacterial signalling protein N terminal repeat At15955_06080 PF00563 EAL domain At15955_06150 PF08240 Alcohol dehydrogenase GroES-like domain At15955_06150 PF00107 Zinc-binding dehydrogenase At15955_06160 PF01638 HxlR-like helix-turn-helix At15955_06170 PF02673 Bacitracin resistance protein BacA At15955_06180 PF03448 MgtE intracellular N domain At15955_06180 PF00571 CBS domain At15955_06180 PF01769 Divalent cation transporter At15955_06190 PF07690 Major Facilitator Superfamily At15955_06200 PF00781 Diacylglycerol kinase catalytic domain At15955_06210 PF00202 Aminotransferase class-III At15955_06230 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus At15955_06230 PF01048 Phosphorylase superfamily At15955_06290 PF00155 Aminotransferase class I and II At15955_06310 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_06310 PF14759 Reductase C-terminal At15955_06320 PF03328 HpcH/HpaI aldolase/citrate lyase family At15955_06350 PF02530 Porin subfamily At15955_06360 PF02530 Porin subfamily At15955_06370 PF01464 Transglycosylase SLT domain At15955_06370 PF14718 Soluble lytic murein transglycosylase L domain At15955_06380 PF00701 Dihydrodipicolinate synthetase family At15955_06390 PF01668 SmpB protein At15955_06400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_06400 PF00672 HAMP domain At15955_06420 PF01192 RNA polymerase Rpb6 At15955_06430 PF02824 TGS domain At15955_06430 PF04607 Region found in RelA / SpoT proteins At15955_06430 PF13291 ACT domain At15955_06460 PF01648 4'-phosphopantetheinyl transferase superfamily At15955_06470 PF10502 Signal peptidase, peptidase S26 At15955_06480 PF14622 Ribonuclease-III-like At15955_06480 PF00035 Double-stranded RNA binding motif At15955_06490 PF01926 50S ribosome-binding GTPase At15955_06490 PF07650 KH domain At15955_06500 PF13545 Crp-like helix-turn-helix domain At15955_06500 PF00027 Cyclic nucleotide-binding domain At15955_06510 PF00072 Response regulator receiver domain At15955_06520 PF11967 Recombination protein O N terminal At15955_06520 PF02565 Recombination protein O C terminal At15955_06530 PF07690 Major Facilitator Superfamily At15955_06540 PF08241 Methyltransferase domain At15955_06560 PF01966 HD domain At15955_06580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_06600 PF00005 ABC transporter At15955_06610 PF00528 Binding-protein-dependent transport system inner membrane component At15955_06620 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment At15955_06630 PF00924 Mechanosensitive ion channel At15955_06630 PF05552 Conserved TM helix At15955_06650 PF01966 HD domain At15955_06700 PF00293 NUDIX domain At15955_06700 PF03099 Biotin/lipoate A/B protein ligase family At15955_06710 PF02694 Uncharacterised BCR, YnfA/UPF0060 family At15955_06730 PF00072 Response regulator receiver domain At15955_06730 PF00990 Diguanylate cyclase, GGDEF domain At15955_06750 PF01066 CDP-alcohol phosphatidyltransferase At15955_06760 PF02666 Phosphatidylserine decarboxylase At15955_06770 PF00664 ABC transporter transmembrane region At15955_06770 PF00005 ABC transporter At15955_06790 PF03641 Possible lysine decarboxylase At15955_06800 PF00905 Penicillin binding protein transpeptidase domain At15955_06800 PF03717 Penicillin-binding Protein dimerisation domain At15955_06810 PF00892 EamA-like transporter family At15955_06820 PF00561 alpha/beta hydrolase fold At15955_06860 PF04480 Protein of unknown function (DUF559) At15955_06870 PF09190 DALR domain At15955_06870 PF01406 tRNA synthetases class I (C) catalytic domain At15955_06880 PF00106 short chain dehydrogenase At15955_06890 PF00156 Phosphoribosyl transferase domain At15955_06890 PF13537 Glutamine amidotransferase domain At15955_06900 PF02674 Colicin V production protein At15955_06910 PF18073 Rubredoxin metal binding domain At15955_06910 PF06745 KaiC At15955_06940 PF00842 Alanine racemase, C-terminal domain At15955_06940 PF01168 Alanine racemase, N-terminal domain At15955_06950 PF12833 Helix-turn-helix domain At15955_06950 PF12852 Cupin At15955_06960 PF03591 AzlC protein At15955_06980 PF00772 DnaB-like helicase N terminal domain At15955_06980 PF03796 DnaB-like helicase C terminal domain At15955_06990 PF01047 MarR family At15955_07010 PF13533 Biotin-lipoyl like At15955_07020 PF01281 Ribosomal protein L9, N-terminal domain At15955_07020 PF03948 Ribosomal protein L9, C-terminal domain At15955_07040 PF01084 Ribosomal protein S18 At15955_07050 PF01250 Ribosomal protein S6 At15955_07060 PF00248 Aldo/keto reductase family At15955_07070 PF00698 Acyl transferase domain At15955_07090 PF00550 Phosphopantetheine attachment site At15955_07100 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_07100 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_07110 PF02618 YceG-like family At15955_07120 PF03755 YicC-like family, N-terminal region At15955_07120 PF08340 Domain of unknown function (DUF1732) At15955_07130 PF00625 Guanylate kinase At15955_07150 PF00398 Ribosomal RNA adenine dimethylase At15955_07160 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At15955_07180 PF04453 LPS transport system D At15955_07180 PF03968 OstA-like protein At15955_07210 PF02789 Cytosol aminopeptidase family, N-terminal domain At15955_07210 PF00883 Cytosol aminopeptidase family, catalytic domain At15955_07230 PF03707 Bacterial signalling protein N terminal repeat At15955_07230 PF00990 Diguanylate cyclase, GGDEF domain At15955_07230 PF00563 EAL domain At15955_07240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_07250 PF01590 GAF domain At15955_07250 PF00990 Diguanylate cyclase, GGDEF domain At15955_07250 PF00360 Phytochrome region At15955_07250 PF00563 EAL domain At15955_07260 PF00990 Diguanylate cyclase, GGDEF domain At15955_07260 PF13185 GAF domain At15955_07260 PF00563 EAL domain At15955_07270 PF12848 ABC transporter At15955_07270 PF00005 ABC transporter At15955_07280 PF17158 Membrane-associated sensor, integral membrane domain At15955_07280 PF00990 Diguanylate cyclase, GGDEF domain At15955_07290 PF13417 Glutathione S-transferase, N-terminal domain At15955_07300 PF00334 Nucleoside diphosphate kinase At15955_07340 PF02391 MoaE protein At15955_07360 PF01066 CDP-alcohol phosphatidyltransferase At15955_07370 PF08459 UvrC Helix-hairpin-helix N-terminal At15955_07370 PF02151 UvrB/uvrC motif At15955_07370 PF01541 GIY-YIG catalytic domain At15955_07390 PF13505 Outer membrane protein beta-barrel domain At15955_07400 PF13417 Glutathione S-transferase, N-terminal domain At15955_07400 PF00043 Glutathione S-transferase, C-terminal domain At15955_07410 PF00445 Ribonuclease T2 family At15955_07430 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ At15955_07440 PF00384 Molybdopterin oxidoreductase At15955_07440 PF01568 Molydopterin dinucleotide binding domain At15955_07440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At15955_07450 PF00293 NUDIX domain At15955_07480 PF00551 Formyl transferase At15955_07490 PF02769 AIR synthase related protein, C-terminal domain At15955_07490 PF00586 AIR synthase related protein, N-terminal domain At15955_07500 PF01594 AI-2E family transporter At15955_07520 PF17941 Polyphosphate kinase C-terminal domain 1 At15955_07520 PF02503 Polyphosphate kinase middle domain At15955_07520 PF13089 Polyphosphate kinase N-terminal domain At15955_07520 PF13090 Polyphosphate kinase C-terminal domain 2 At15955_07530 PF02541 Ppx/GppA phosphatase family At15955_07540 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_07580 PF00211 Adenylate and Guanylate cyclase catalytic domain At15955_07600 PF01612 3'-5' exonuclease At15955_07600 PF00570 HRDC domain At15955_07610 PF07690 Major Facilitator Superfamily At15955_07620 PF00152 tRNA synthetases class II (D, K and N) At15955_07620 PF01336 OB-fold nucleic acid binding domain At15955_07620 PF02938 GAD domain At15955_07630 PF06123 Inner membrane protein CreD At15955_07640 PF01740 STAS domain At15955_07640 PF00916 Sulfate permease family At15955_07660 PF03989 DNA gyrase C-terminal domain, beta-propeller At15955_07660 PF00521 DNA gyrase/topoisomerase IV, subunit A At15955_07670 PF02661 Fic/DOC family At15955_07680 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin At15955_07690 PF04376 Arginine-tRNA-protein transferase, N terminus At15955_07690 PF04377 Arginine-tRNA-protein transferase, C terminus At15955_07710 PF00490 Delta-aminolevulinic acid dehydratase At15955_07750 PF00464 Serine hydroxymethyltransferase At15955_07760 PF03477 ATP cone domain At15955_07770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At15955_07770 PF01872 RibD C-terminal domain At15955_07780 PF00677 Lumazine binding domain At15955_07790 PF01810 LysE type translocator At15955_07800 PF00885 6,7-dimethyl-8-ribityllumazine synthase At15955_07810 PF01029 NusB family At15955_07820 PF07690 Major Facilitator Superfamily At15955_07830 PF03030 Inorganic H+ pyrophosphatase At15955_07870 PF02504 Fatty acid synthesis protein At15955_07880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At15955_07880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At15955_07890 PF00216 Bacterial DNA-binding protein At15955_07900 PF13411 MerR HTH family regulatory protein At15955_07920 PF00403 Heavy-metal-associated domain At15955_07930 PF00970 Oxidoreductase FAD-binding domain At15955_07930 PF00175 Oxidoreductase NAD-binding domain At15955_07930 PF00111 2Fe-2S iron-sulfur cluster binding domain At15955_07940 PF09278 MerR, DNA binding At15955_07940 PF00376 MerR family regulatory protein At15955_07950 PF00528 Binding-protein-dependent transport system inner membrane component At15955_07960 PF00528 Binding-protein-dependent transport system inner membrane component At15955_07960 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_07970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_07970 PF00005 ABC transporter At15955_07980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_07980 PF00005 ABC transporter At15955_07990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_08010 PF02386 Cation transport protein At15955_08020 PF00585 C-terminal regulatory domain of Threonine dehydratase At15955_08020 PF00291 Pyridoxal-phosphate dependent enzyme At15955_08040 PF00072 Response regulator receiver domain At15955_08040 PF00990 Diguanylate cyclase, GGDEF domain At15955_08050 PF02525 Flavodoxin-like fold At15955_08060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_08060 PF03466 LysR substrate binding domain At15955_08080 PF00149 Calcineurin-like phosphoesterase At15955_08080 PF02872 5'-nucleotidase, C-terminal domain At15955_08130 PF00581 Rhodanese-like domain At15955_08140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At15955_08140 PF01411 tRNA synthetases class II (A) At15955_08140 PF02272 DHHA1 domain At15955_08150 PF00571 CBS domain At15955_08150 PF00291 Pyridoxal-phosphate dependent enzyme At15955_08170 PF00875 DNA photolyase At15955_08170 PF03441 FAD binding domain of DNA photolyase At15955_08190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At15955_08190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At15955_08240 PF06055 Exopolysaccharide synthesis, ExoD At15955_08260 PF09335 SNARE associated Golgi protein At15955_08290 PF01032 FecCD transport family At15955_08300 PF00005 ABC transporter At15955_08310 PF00127 Copper binding proteins, plastocyanin/azurin family At15955_08320 PF00210 Ferritin-like domain At15955_08390 PF02397 Bacterial sugar transferase At15955_08400 PF00534 Glycosyl transferases group 1 At15955_08450 PF02628 Cytochrome oxidase assembly protein At15955_08460 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase At15955_08470 PF01118 Semialdehyde dehydrogenase, NAD binding domain At15955_08480 PF00491 Arginase family At15955_08490 PF00380 Ribosomal protein S9/S16 At15955_08500 PF00572 Ribosomal protein L13 At15955_08520 PF13380 CoA binding domain At15955_08530 PF01053 Cys/Met metabolism PLP-dependent enzyme At15955_08550 PF00067 Cytochrome P450 At15955_08560 PF00990 Diguanylate cyclase, GGDEF domain At15955_08570 PF00574 Clp protease At15955_08580 PF07724 AAA domain (Cdc48 subfamily) At15955_08580 PF10431 C-terminal, D2-small domain, of ClpB protein At15955_08580 PF06689 ClpX C4-type zinc finger At15955_08590 PF05362 Lon protease (S16) C-terminal proteolytic domain At15955_08590 PF00004 ATPase family associated with various cellular activities (AAA) At15955_08590 PF02190 ATP-dependent protease La (LON) substrate-binding domain At15955_08600 PF00216 Bacterial DNA-binding protein At15955_08610 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At15955_08640 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 At15955_08650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit At15955_08660 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit At15955_08680 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit At15955_08710 PF10531 SLBB domain At15955_08710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At15955_08710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At15955_08730 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal At15955_08730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At15955_08730 PF00384 Molybdopterin oxidoreductase At15955_08740 PF00146 NADH dehydrogenase At15955_08750 PF12838 4Fe-4S dicluster domain At15955_08760 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 At15955_08770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At15955_08780 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At15955_08780 PF00361 Proton-conducting membrane transporter At15955_08790 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus At15955_08790 PF00361 Proton-conducting membrane transporter At15955_08800 PF00361 Proton-conducting membrane transporter At15955_08810 PF08279 HTH domain At15955_08810 PF03099 Biotin/lipoate A/B protein ligase family At15955_08810 PF02237 Biotin protein ligase C terminal domain At15955_08820 PF17770 Ribonuclease J C-terminal domain At15955_08820 PF12706 Beta-lactamase superfamily domain At15955_08820 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain At15955_08840 PF03129 Anticodon binding domain At15955_08840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At15955_08850 PF02687 FtsX-like permease family At15955_08850 PF12704 MacB-like periplasmic core domain At15955_08860 PF00005 ABC transporter At15955_08870 PF14579 Helix-hairpin-helix motif At15955_08870 PF02811 PHP domain At15955_08870 PF07733 Bacterial DNA polymerase III alpha NTPase domain At15955_08870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At15955_08890 PF11799 impB/mucB/samB family C-terminal domain At15955_08890 PF00817 impB/mucB/samB family At15955_08910 PF00072 Response regulator receiver domain At15955_08920 PF00990 Diguanylate cyclase, GGDEF domain At15955_08920 PF00072 Response regulator receiver domain At15955_08930 PF00471 Ribosomal protein L33 At15955_08940 PF07690 Major Facilitator Superfamily At15955_08970 PF00575 S1 RNA binding domain At15955_08970 PF00773 RNB domain At15955_08970 PF08206 Ribonuclease B OB domain At15955_08970 PF08461 Ribonuclease R winged-helix domain At15955_08970 PF17876 Cold shock domain At15955_08980 PF01751 Toprim domain At15955_08980 PF01396 Topoisomerase DNA binding C4 zinc finger At15955_08980 PF01131 DNA topoisomerase At15955_08980 PF13368 Topoisomerase C-terminal repeat At15955_09000 PF02481 DNA recombination-mediator protein A At15955_09000 PF17782 DprA winged helix domain At15955_09010 PF02660 Glycerol-3-phosphate acyltransferase At15955_09020 PF01979 Amidohydrolase family At15955_09030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At15955_09030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At15955_09040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_09040 PF18158 Adaptive response protein AidB N-terminal domain At15955_09040 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_09050 PF00583 Acetyltransferase (GNAT) family At15955_09090 PF03652 Holliday junction resolvase At15955_09100 PF08274 PhnA Zinc-Ribbon At15955_09100 PF03831 PhnA domain At15955_09120 PF02686 Glu-tRNAGln amidotransferase C subunit At15955_09130 PF01425 Amidase At15955_09140 PF09857 Putative toxin of bacterial toxin-antitoxin pair At15955_09150 PF00583 Acetyltransferase (GNAT) family At15955_09170 PF02637 GatB domain At15955_09170 PF02934 GatB/GatE catalytic domain At15955_09190 PF00583 Acetyltransferase (GNAT) family At15955_09220 PF03588 Leucyl/phenylalanyl-tRNA protein transferase At15955_09230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_09230 PF00289 Biotin carboxylase, N-terminal domain At15955_09230 PF02785 Biotin carboxylase C-terminal domain At15955_09240 PF00364 Biotin-requiring enzyme At15955_09250 PF01220 Dehydroquinase class II At15955_09260 PF13462 Thioredoxin At15955_09260 PF06965 Na+/H+ antiporter 1 At15955_09270 PF00155 Aminotransferase class I and II At15955_09320 PF00575 S1 RNA binding domain At15955_09320 PF12111 Polyribonucleotide phosphorylase C terminal At15955_09320 PF10150 Ribonuclease E/G family At15955_09330 PF01520 N-acetylmuramoyl-L-alanine amidase At15955_09340 PF17092 Penicillin-binding protein OB-like domain At15955_09340 PF00912 Transglycosylase At15955_09340 PF00905 Penicillin binding protein transpeptidase domain At15955_09350 PF00472 RF-1 domain At15955_09350 PF03462 PCRF domain At15955_09380 PF01513 ATP-NAD kinase At15955_09390 PF02567 Phenazine biosynthesis-like protein At15955_09430 PF00111 2Fe-2S iron-sulfur cluster binding domain At15955_09450 PF00809 Pterin binding enzyme At15955_09460 PF02152 Dihydroneopterin aldolase At15955_09470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) At15955_09490 PF05128 Domain of unknown function (DUF697) At15955_09500 PF04317 YcjX-like family, DUF463 At15955_09520 PF01258 Prokaryotic dksA/traR C4-type zinc finger At15955_09550 PF00072 Response regulator receiver domain At15955_09550 PF00512 His Kinase A (phospho-acceptor) domain At15955_09550 PF08448 PAS fold At15955_09550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_09550 PF13188 PAS domain At15955_09570 PF02617 ATP-dependent Clp protease adaptor protein ClpS At15955_09580 PF02861 Clp amino terminal domain, pathogenicity island component At15955_09580 PF17871 AAA lid domain At15955_09580 PF07724 AAA domain (Cdc48 subfamily) At15955_09580 PF10431 C-terminal, D2-small domain, of ClpB protein At15955_09580 PF00004 ATPase family associated with various cellular activities (AAA) At15955_09640 PF01230 HIT domain At15955_09700 PF00318 Ribosomal protein S2 At15955_09710 PF00889 Elongation factor TS At15955_09720 PF00696 Amino acid kinase family At15955_09730 PF01765 Ribosome recycling factor At15955_09740 PF01255 Putative undecaprenyl diphosphate synthase At15955_09760 PF02163 Peptidase family M50 At15955_09760 PF17820 PDZ domain At15955_09770 PF01103 Surface antigen At15955_09770 PF07244 Surface antigen variable number repeat At15955_09780 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_09780 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD At15955_09790 PF07977 FabA-like domain At15955_09800 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_09800 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 At15955_09810 PF06230 LpxI C-terminal domain At15955_09810 PF17930 LpxI N-terminal domain At15955_09820 PF02684 Lipid-A-disaccharide synthetase At15955_09830 PF00285 Citrate synthase, C-terminal domain At15955_09860 PF00717 Peptidase S24-like At15955_09860 PF01726 LexA DNA binding domain At15955_09880 PF00793 DAHP synthetase I family At15955_09890 PF03952 Enolase, N-terminal domain At15955_09890 PF00113 Enolase, C-terminal TIM barrel domain At15955_09910 PF00676 Dehydrogenase E1 component At15955_09920 PF02779 Transketolase, pyrimidine binding domain At15955_09920 PF00364 Biotin-requiring enzyme At15955_09920 PF02780 Transketolase, C-terminal domain At15955_09930 PF00364 Biotin-requiring enzyme At15955_09930 PF02817 e3 binding domain At15955_09930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At15955_09950 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_09950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At15955_09970 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At15955_09970 PF04055 Radical SAM superfamily At15955_09980 PF00892 EamA-like transporter family At15955_10020 PF03364 Polyketide cyclase / dehydrase and lipid transport At15955_10030 PF02464 Competence-damaged protein At15955_10040 PF02542 YgbB family At15955_10040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase At15955_10050 PF01207 Dihydrouridine synthase (Dus) At15955_10060 PF00512 His Kinase A (phospho-acceptor) domain At15955_10060 PF00989 PAS fold At15955_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_10070 PF00158 Sigma-54 interaction domain At15955_10070 PF02954 Bacterial regulatory protein, Fis family At15955_10070 PF00072 Response regulator receiver domain At15955_10080 PF00672 HAMP domain At15955_10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_10080 PF00512 His Kinase A (phospho-acceptor) domain At15955_10080 PF00989 PAS fold At15955_10090 PF00072 Response regulator receiver domain At15955_10090 PF02954 Bacterial regulatory protein, Fis family At15955_10090 PF00158 Sigma-54 interaction domain At15955_10100 PF02254 TrkA-N domain At15955_10100 PF02080 TrkA-C domain At15955_10110 PF17209 Hfq protein At15955_10120 PF01926 50S ribosome-binding GTPase At15955_10120 PF16360 GTP-binding GTPase Middle Region At15955_10120 PF13167 GTP-binding GTPase N-terminal At15955_10130 PF03819 MazG nucleotide pyrophosphohydrolase domain At15955_10150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_10150 PF14824 Sirohaem biosynthesis protein central At15955_10150 PF10414 Sirohaem synthase dimerisation region At15955_10190 PF00175 Oxidoreductase NAD-binding domain At15955_10190 PF00970 Oxidoreductase FAD-binding domain At15955_10200 PF07690 Major Facilitator Superfamily At15955_10230 PF02347 Glycine cleavage system P-protein At15955_10240 PF01597 Glycine cleavage H-protein At15955_10250 PF08669 Glycine cleavage T-protein C-terminal barrel domain At15955_10250 PF01571 Aminomethyltransferase folate-binding domain At15955_10310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) At15955_10320 PF00849 RNA pseudouridylate synthase At15955_10320 PF01479 S4 domain At15955_10330 PF13419 Haloacid dehalogenase-like hydrolase At15955_10370 PF00756 Putative esterase At15955_10390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 At15955_10410 PF10417 C-terminal domain of 1-Cys peroxiredoxin At15955_10410 PF00578 AhpC/TSA family At15955_10420 PF02798 Glutathione S-transferase, N-terminal domain At15955_10420 PF00043 Glutathione S-transferase, C-terminal domain At15955_10460 PF04542 Sigma-70 region 2 At15955_10460 PF08281 Sigma-70, region 4 At15955_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_10500 PF03466 LysR substrate binding domain At15955_10510 PF04303 PrpF protein At15955_10530 PF00005 ABC transporter At15955_10540 PF00528 Binding-protein-dependent transport system inner membrane component At15955_10550 PF00072 Response regulator receiver domain At15955_10550 PF13426 PAS domain At15955_10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_10560 PF00072 Response regulator receiver domain At15955_10570 PF13426 PAS domain At15955_10570 PF08447 PAS fold At15955_10570 PF07536 HWE histidine kinase At15955_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_10580 PF13426 PAS domain At15955_10580 PF00072 Response regulator receiver domain At15955_10600 PF00034 Cytochrome c At15955_10620 PF00732 GMC oxidoreductase At15955_10620 PF05199 GMC oxidoreductase At15955_10640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_10640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_10660 PF00356 Bacterial regulatory proteins, lacI family At15955_10670 PF02653 Branched-chain amino acid transport system / permease component At15955_10680 PF02653 Branched-chain amino acid transport system / permease component At15955_10690 PF00005 ABC transporter At15955_10700 PF13407 Periplasmic binding protein domain At15955_10710 PF00075 RNase H At15955_10730 PF13649 Methyltransferase domain At15955_10740 PF00654 Voltage gated chloride channel At15955_10750 PF12706 Beta-lactamase superfamily domain At15955_10750 PF03099 Biotin/lipoate A/B protein ligase family At15955_10760 PF01026 TatD related DNase At15955_10770 PF09334 tRNA synthetases class I (M) At15955_10770 PF08264 Anticodon-binding domain of tRNA At15955_10780 PF09115 DNA polymerase III, delta subunit, C terminal At15955_10790 PF02223 Thymidylate kinase At15955_10800 PF07943 Penicillin-binding protein 5, C-terminal domain At15955_10800 PF00768 D-alanyl-D-alanine carboxypeptidase At15955_10810 PF03330 Lytic transglycolase At15955_10810 PF05036 Sporulation related domain At15955_10880 PF03989 DNA gyrase C-terminal domain, beta-propeller At15955_10880 PF00521 DNA gyrase/topoisomerase IV, subunit A At15955_10890 PF01914 MarC family integral membrane protein At15955_10910 PF00436 Single-strand binding protein family At15955_10920 PF17755 UvrA DNA-binding domain At15955_10920 PF17760 UvrA interaction domain At15955_10940 PF01207 Dihydrouridine synthase (Dus) At15955_10950 PF01557 Fumarylacetoacetate (FAA) hydrolase family At15955_10960 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_10980 PF00950 ABC 3 transport family At15955_10990 PF00005 ABC transporter At15955_11000 PF01297 Zinc-uptake complex component A periplasmic At15955_11030 PF00248 Aldo/keto reductase family At15955_11050 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At15955_11050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At15955_11060 PF03597 Cytochrome oxidase maturation protein cbb3-type At15955_11080 PF05751 FixH At15955_11090 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase At15955_11090 PF12801 4Fe-4S binding domain At15955_11090 PF13746 4Fe-4S dicluster domain At15955_11120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III At15955_11120 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP At15955_11150 PF00115 Cytochrome C and Quinol oxidase polypeptide I At15955_11160 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase At15955_11190 PF00376 MerR family regulatory protein At15955_11190 PF09278 MerR, DNA binding At15955_11200 PF03448 MgtE intracellular N domain At15955_11200 PF01769 Divalent cation transporter At15955_11200 PF00571 CBS domain At15955_11210 PF00384 Molybdopterin oxidoreductase At15955_11230 PF01327 Polypeptide deformylase At15955_11280 PF03099 Biotin/lipoate A/B protein ligase family At15955_11290 PF00107 Zinc-binding dehydrogenase At15955_11290 PF08240 Alcohol dehydrogenase GroES-like domain At15955_11340 PF07549 SecD/SecF GG Motif At15955_11340 PF02355 Protein export membrane protein At15955_11350 PF02699 Preprotein translocase subunit At15955_11370 PF08240 Alcohol dehydrogenase GroES-like domain At15955_11370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At15955_11390 PF00067 Cytochrome P450 At15955_11410 PF06426 Serine acetyltransferase, N-terminal At15955_11410 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_11420 PF00561 alpha/beta hydrolase fold At15955_11440 PF01494 FAD binding domain At15955_11450 PF01053 Cys/Met metabolism PLP-dependent enzyme At15955_11460 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_11470 PF00528 Binding-protein-dependent transport system inner membrane component At15955_11480 PF00528 Binding-protein-dependent transport system inner membrane component At15955_11490 PF00005 ABC transporter At15955_11500 PF01368 DHH family At15955_11500 PF02272 DHHA1 domain At15955_11500 PF17768 RecJ OB domain At15955_11520 PF00742 Homoserine dehydrogenase At15955_11520 PF01842 ACT domain At15955_11520 PF03447 Homoserine dehydrogenase, NAD binding domain At15955_11530 PF00155 Aminotransferase class I and II At15955_11540 PF01156 Inosine-uridine preferring nucleoside hydrolase At15955_11550 PF01925 Sulfite exporter TauE/SafE At15955_11580 PF00107 Zinc-binding dehydrogenase At15955_11580 PF08240 Alcohol dehydrogenase GroES-like domain At15955_11590 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_11590 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_11610 PF07977 FabA-like domain At15955_11620 PF00550 Phosphopantetheine attachment site At15955_11630 PF04055 Radical SAM superfamily At15955_11640 PF13545 Crp-like helix-turn-helix domain At15955_11640 PF00027 Cyclic nucleotide-binding domain At15955_11660 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus At15955_11670 PF17746 SfsA N-terminal OB domain At15955_11670 PF03749 Sugar fermentation stimulation protein RE domain At15955_11680 PF00557 Metallopeptidase family M24 At15955_11690 PF04002 RadC-like JAB domain At15955_11720 PF01474 Class-II DAHP synthetase family At15955_11730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At15955_11730 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_11750 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At15955_11760 PF13419 Haloacid dehalogenase-like hydrolase At15955_11780 PF00206 Lyase At15955_11780 PF10415 Fumarase C C-terminus At15955_11800 PF06418 CTP synthase N-terminus At15955_11800 PF00117 Glutamine amidotransferase class-I At15955_11810 PF03840 Preprotein translocase SecG subunit At15955_11820 PF00121 Triosephosphate isomerase At15955_11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_11840 PF00204 DNA gyrase B At15955_11840 PF01751 Toprim domain At15955_11840 PF00986 DNA gyrase B subunit, carboxyl terminus At15955_11850 PF00574 Clp protease At15955_11870 PF01022 Bacterial regulatory protein, arsR family At15955_11880 PF13091 PLD-like domain At15955_11900 PF08669 Glycine cleavage T-protein C-terminal barrel domain At15955_11900 PF01571 Aminomethyltransferase folate-binding domain At15955_11900 PF16350 FAD dependent oxidoreductase central domain At15955_11900 PF01266 FAD dependent oxidoreductase At15955_11930 PF12794 Mechanosensitive ion channel inner membrane domain 1 At15955_11930 PF00924 Mechanosensitive ion channel At15955_11930 PF12795 Mechanosensitive ion channel porin domain At15955_12060 PF00005 ABC transporter At15955_12070 PF02405 Permease MlaE At15955_12080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_12080 PF13378 Enolase C-terminal domain-like At15955_12100 PF01515 Phosphate acetyl/butaryl transferase At15955_12100 PF03949 Malic enzyme, NAD binding domain At15955_12100 PF00390 Malic enzyme, N-terminal domain At15955_12120 PF00881 Nitroreductase family At15955_12130 PF07676 WD40-like Beta Propeller Repeat At15955_12150 PF02540 NAD synthase At15955_12150 PF00795 Carbon-nitrogen hydrolase At15955_12160 PF00884 Sulfatase At15955_12180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At15955_12180 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_12220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase At15955_12220 PF05698 Bacterial trigger factor protein (TF) C-terminus At15955_12220 PF05697 Bacterial trigger factor protein (TF) At15955_12260 PF01134 Glucose inhibited division protein A At15955_12300 PF00107 Zinc-binding dehydrogenase At15955_12300 PF08240 Alcohol dehydrogenase GroES-like domain At15955_12320 PF00550 Phosphopantetheine attachment site At15955_12330 PF00501 AMP-binding enzyme At15955_12330 PF00975 Thioesterase domain At15955_12330 PF13193 AMP-binding enzyme C-terminal domain At15955_12330 PF00550 Phosphopantetheine attachment site At15955_12330 PF00668 Condensation domain At15955_12340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At15955_12340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At15955_12370 PF04715 Anthranilate synthase component I, N terminal region At15955_12370 PF00117 Glutamine amidotransferase class-I At15955_12370 PF00425 chorismate binding enzyme At15955_12380 PF01702 Queuine tRNA-ribosyltransferase At15955_12390 PF02547 Queuosine biosynthesis protein At15955_12400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At15955_12410 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At15955_12420 PF01467 Cytidylyltransferase-like At15955_12460 PF00591 Glycosyl transferase family, a/b domain At15955_12460 PF02885 Glycosyl transferase family, helical bundle domain At15955_12470 PF00218 Indole-3-glycerol phosphate synthase At15955_12480 PF01967 MoaC family At15955_12490 PF03453 MoeA N-terminal region (domain I and II) At15955_12490 PF03454 MoeA C-terminal region (domain IV) At15955_12490 PF00994 Probable molybdopterin binding domain At15955_12500 PF00990 Diguanylate cyclase, GGDEF domain At15955_12500 PF17158 Membrane-associated sensor, integral membrane domain At15955_12520 PF02254 TrkA-N domain At15955_12520 PF00999 Sodium/hydrogen exchanger family At15955_12540 PF04055 Radical SAM superfamily At15955_12540 PF06463 Molybdenum Cofactor Synthesis C At15955_12550 PF00892 EamA-like transporter family At15955_12560 PF07690 Major Facilitator Superfamily At15955_12570 PF12804 MobA-like NTP transferase domain At15955_12580 PF03205 Molybdopterin guanine dinucleotide synthesis protein B At15955_12590 PF01551 Peptidase family M23 At15955_12610 PF01975 Survival protein SurE At15955_12620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At15955_12620 PF02403 Seryl-tRNA synthetase N-terminal domain At15955_12630 PF00902 Sec-independent protein translocase protein (TatC) At15955_12640 PF02416 mttA/Hcf106 family At15955_12650 PF02416 mttA/Hcf106 family At15955_12660 PF04079 Segregation and condensation complex subunit ScpB At15955_12670 PF02616 Segregation and condensation protein ScpA At15955_12680 PF00933 Glycosyl hydrolase family 3 N terminal domain At15955_12700 PF05746 DALR anticodon binding domain At15955_12700 PF00750 tRNA synthetases class I (R) At15955_12700 PF03485 Arginyl tRNA synthetase N terminal domain At15955_12710 PF01966 HD domain At15955_12710 PF13286 Phosphohydrolase-associated domain At15955_12720 PF01521 Iron-sulphur cluster biosynthesis At15955_12740 PF08238 Sel1 repeat At15955_12760 PF08264 Anticodon-binding domain of tRNA At15955_12760 PF00133 tRNA synthetases class I (I, L, M and V) At15955_12760 PF10458 Valyl tRNA synthetase tRNA binding arm At15955_12850 PF03358 NADPH-dependent FMN reductase At15955_12860 PF18146 Damage-inducible protein CinA KH domain At15955_12860 PF00994 Probable molybdopterin binding domain At15955_12860 PF02464 Competence-damaged protein At15955_12870 PF00582 Universal stress protein family At15955_12880 PF00156 Phosphoribosyl transferase domain At15955_12890 PF02867 Ribonucleotide reductase, barrel domain At15955_12890 PF08471 Class II vitamin B12-dependent ribonucleotide reductase At15955_12900 PF08000 Bacterial PH domain At15955_12910 PF01566 Natural resistance-associated macrophage protein At15955_12940 PF00664 ABC transporter transmembrane region At15955_12940 PF00005 ABC transporter At15955_12950 PF01594 AI-2E family transporter At15955_12960 PF00583 Acetyltransferase (GNAT) family At15955_13020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At15955_13020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At15955_13020 PF03129 Anticodon binding domain At15955_13020 PF02824 TGS domain At15955_13040 PF01809 Putative membrane protein insertion efficiency factor At15955_13060 PF01227 GTP cyclohydrolase I At15955_13070 PF01502 Phosphoribosyl-AMP cyclohydrolase At15955_13080 PF01734 Patatin-like phospholipase At15955_13090 PF00478 IMP dehydrogenase / GMP reductase domain At15955_13090 PF00571 CBS domain At15955_13150 PF03315 Serine dehydratase beta chain At15955_13150 PF03313 Serine dehydratase alpha chain At15955_13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_13220 PF03466 LysR substrate binding domain At15955_13240 PF01965 DJ-1/PfpI family At15955_13240 PF12833 Helix-turn-helix domain At15955_13250 PF01256 Carbohydrate kinase At15955_13250 PF03853 YjeF-related protein N-terminus At15955_13260 PF00543 Nitrogen regulatory protein P-II At15955_13270 PF00120 Glutamine synthetase, catalytic domain At15955_13270 PF03951 Glutamine synthetase, beta-Grasp domain At15955_13290 PF08755 Hemimethylated DNA-binding protein YccV like At15955_13310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_13330 PF00892 EamA-like transporter family At15955_13350 PF03461 TRCF domain At15955_13350 PF02559 CarD-like/TRCF domain At15955_13350 PF00270 DEAD/DEAH box helicase At15955_13350 PF17757 UvrB interaction domain At15955_13350 PF00271 Helicase conserved C-terminal domain At15955_13370 PF00271 Helicase conserved C-terminal domain At15955_13370 PF17191 RecG wedge domain At15955_13370 PF00270 DEAD/DEAH box helicase At15955_13400 PF01850 PIN domain At15955_13430 PF01380 SIS domain At15955_13440 PF12804 MobA-like NTP transferase domain At15955_13440 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_13440 PF14602 Hexapeptide repeat of succinyl-transferase At15955_13450 PF07729 FCD domain At15955_13450 PF00392 Bacterial regulatory proteins, gntR family At15955_13460 PF02608 ABC transporter substrate-binding protein PnrA-like At15955_13490 PF00005 ABC transporter At15955_13510 PF01494 FAD binding domain At15955_13520 PF03547 Membrane transport protein At15955_13530 PF02683 Cytochrome C biogenesis protein transmembrane region At15955_13550 PF12900 Pyridoxamine 5'-phosphate oxidase At15955_13580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_13590 PF00313 'Cold-shock' DNA-binding domain At15955_13680 PF02687 FtsX-like permease family At15955_13680 PF12704 MacB-like periplasmic core domain At15955_13680 PF00005 ABC transporter At15955_13690 PF02687 FtsX-like permease family At15955_13690 PF12704 MacB-like periplasmic core domain At15955_13690 PF00005 ABC transporter At15955_13710 PF01521 Iron-sulphur cluster biosynthesis At15955_13720 PF01883 Iron-sulfur cluster assembly protein At15955_13730 PF00266 Aminotransferase class-V At15955_13740 PF01458 Uncharacterized protein family (UPF0051) At15955_13750 PF00005 ABC transporter At15955_13760 PF01458 Uncharacterized protein family (UPF0051) At15955_13780 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At15955_13790 PF03702 Anhydro-N-acetylmuramic acid kinase At15955_13800 PF00579 tRNA synthetases class I (W and Y) At15955_13820 PF00578 AhpC/TSA family At15955_13830 PF04305 Protein of unknown function (DUF455) At15955_13840 PF01476 LysM domain At15955_13840 PF01551 Peptidase family M23 At15955_13840 PF08525 Opacity-associated protein A N-terminal motif At15955_13850 PF00271 Helicase conserved C-terminal domain At15955_13850 PF00270 DEAD/DEAH box helicase At15955_13880 PF00834 Ribulose-phosphate 3 epimerase family At15955_13900 PF10397 Adenylosuccinate lyase C-terminus At15955_13900 PF00206 Lyase At15955_13920 PF01259 SAICAR synthetase At15955_13930 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase At15955_13970 PF00155 Aminotransferase class I and II At15955_13970 PF00392 Bacterial regulatory proteins, gntR family At15955_13990 PF02769 AIR synthase related protein, C-terminal domain At15955_13990 PF00586 AIR synthase related protein, N-terminal domain At15955_13990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain At15955_14040 PF00462 Glutaredoxin At15955_14050 PF07690 Major Facilitator Superfamily At15955_14060 PF00459 Inositol monophosphatase family At15955_14070 PF00459 Inositol monophosphatase family At15955_14080 PF01171 PP-loop family At15955_14090 PF04960 Glutaminase At15955_14100 PF00163 Ribosomal protein S4/S9 N-terminal domain At15955_14100 PF01479 S4 domain At15955_14110 PF03741 Integral membrane protein TerC family At15955_14140 PF00892 EamA-like transporter family At15955_14150 PF01810 LysE type translocator At15955_14180 PF01177 Asp/Glu/Hydantoin racemase At15955_14190 PF00588 SpoU rRNA Methylase family At15955_14210 PF00180 Isocitrate/isopropylmalate dehydrogenase At15955_14240 PF02272 DHHA1 domain At15955_14240 PF01411 tRNA synthetases class II (A) At15955_14240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At15955_14250 PF00154 recA bacterial DNA recombination protein At15955_14260 PF00294 pfkB family carbohydrate kinase At15955_14270 PF04227 Indigoidine synthase A like protein At15955_14280 PF01389 OmpA-like transmembrane domain At15955_14280 PF00691 OmpA family At15955_14290 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_14300 PF00528 Binding-protein-dependent transport system inner membrane component At15955_14310 PF00528 Binding-protein-dependent transport system inner membrane component At15955_14320 PF06233 Usg-like family At15955_14340 PF09084 NMT1/THI5 like At15955_14350 PF01037 Lrp/AsnC ligand binding domain At15955_14350 PF13404 AsnC-type helix-turn-helix domain At15955_14360 PF03167 Uracil DNA glycosylase superfamily At15955_14380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_14380 PF00512 His Kinase A (phospho-acceptor) domain At15955_14380 PF00989 PAS fold At15955_14390 PF01219 Prokaryotic diacylglycerol kinase At15955_14400 PF02277 Phosphoribosyltransferase At15955_14410 PF02654 Cobalamin-5-phosphate synthase At15955_14440 PF01061 ABC-2 type transporter At15955_14450 PF00005 ABC transporter At15955_14460 PF01925 Sulfite exporter TauE/SafE At15955_14480 PF17200 Single Cache domain 2 At15955_14480 PF00672 HAMP domain At15955_14480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_14480 PF17200 Single Cache domain 2 At15955_14480 PF00672 HAMP domain At15955_14480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_14500 PF12002 MgsA AAA+ ATPase C terminal At15955_14500 PF16193 AAA C-terminal domain At15955_14500 PF00004 ATPase family associated with various cellular activities (AAA) At15955_14510 PF13180 PDZ domain At15955_14510 PF00595 PDZ domain At15955_14540 PF00920 Dehydratase family At15955_14550 PF00174 Oxidoreductase molybdopterin binding domain At15955_14560 PF01794 Ferric reductase like transmembrane component At15955_14580 PF05675 Protein of unknown function (DUF817) At15955_14600 PF01196 Ribosomal protein L17 At15955_14610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain At15955_14610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain At15955_14610 PF01000 RNA polymerase Rpb3/RpoA insert domain At15955_14620 PF00411 Ribosomal protein S11 At15955_14630 PF00416 Ribosomal protein S13/S18 At15955_14650 PF00344 SecY translocase At15955_14660 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A At15955_14670 PF00327 Ribosomal protein L30p/L7e At15955_14680 PF00333 Ribosomal protein S5, N-terminal domain At15955_14680 PF03719 Ribosomal protein S5, C-terminal domain At15955_14690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast At15955_14700 PF00347 Ribosomal protein L6 At15955_14710 PF00410 Ribosomal protein S8 At15955_14720 PF00253 Ribosomal protein S14p/S29e At15955_14730 PF00673 ribosomal L5P family C-terminus At15955_14730 PF00281 Ribosomal protein L5 At15955_14740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 At15955_14740 PF00467 KOW motif At15955_14750 PF00238 Ribosomal protein L14p/L23e At15955_14760 PF00366 Ribosomal protein S17 At15955_14770 PF00831 Ribosomal L29 protein At15955_14780 PF00252 Ribosomal protein L16p/L10e At15955_14790 PF00189 Ribosomal protein S3, C-terminal domain At15955_14790 PF07650 KH domain At15955_14800 PF00237 Ribosomal protein L22p/L17e At15955_14810 PF00203 Ribosomal protein S19 At15955_14820 PF00181 Ribosomal Proteins L2, RNA binding domain At15955_14820 PF03947 Ribosomal Proteins L2, C-terminal domain At15955_14830 PF00276 Ribosomal protein L23 At15955_14840 PF00573 Ribosomal protein L4/L1 family At15955_14850 PF00297 Ribosomal protein L3 At15955_14860 PF00338 Ribosomal protein S10p/S20e At15955_14870 PF00009 Elongation factor Tu GTP binding domain At15955_14870 PF03143 Elongation factor Tu C-terminal domain At15955_14870 PF03144 Elongation factor Tu domain 2 At15955_14880 PF00679 Elongation factor G C-terminus At15955_14880 PF03764 Elongation factor G, domain IV At15955_14880 PF00009 Elongation factor Tu GTP binding domain At15955_14880 PF03144 Elongation factor Tu domain 2 At15955_14880 PF14492 Elongation Factor G, domain II At15955_14890 PF00177 Ribosomal protein S7p/S5e At15955_14900 PF00164 Ribosomal protein S12/S23 At15955_14930 PF04983 RNA polymerase Rpb1, domain 3 At15955_14930 PF05000 RNA polymerase Rpb1, domain 4 At15955_14930 PF04998 RNA polymerase Rpb1, domain 5 At15955_14930 PF04997 RNA polymerase Rpb1, domain 1 At15955_14930 PF00623 RNA polymerase Rpb1, domain 2 At15955_14940 PF04563 RNA polymerase beta subunit At15955_14940 PF04565 RNA polymerase Rpb2, domain 3 At15955_14940 PF10385 RNA polymerase beta subunit external 1 domain At15955_14940 PF00562 RNA polymerase Rpb2, domain 6 At15955_14940 PF04560 RNA polymerase Rpb2, domain 7 At15955_14940 PF04561 RNA polymerase Rpb2, domain 2 At15955_14950 PF00542 Ribosomal protein L7/L12 C-terminal domain At15955_14950 PF16320 Ribosomal protein L7/L12 dimerisation domain At15955_14960 PF00466 Ribosomal protein L10 At15955_14970 PF00687 Ribosomal protein L1p/L10e family At15955_14980 PF00298 Ribosomal protein L11, RNA binding domain At15955_14980 PF03946 Ribosomal protein L11, N-terminal domain At15955_14990 PF00467 KOW motif At15955_14990 PF02357 Transcription termination factor nusG At15955_15000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex At15955_15020 PF03144 Elongation factor Tu domain 2 At15955_15020 PF00009 Elongation factor Tu GTP binding domain At15955_15020 PF03143 Elongation factor Tu C-terminal domain At15955_15030 PF03741 Integral membrane protein TerC family At15955_15080 PF08032 RNA 2'-O ribose methyltransferase substrate binding At15955_15080 PF00588 SpoU rRNA Methylase family At15955_15090 PF03061 Thioesterase superfamily At15955_15140 PF13460 NAD(P)H-binding At15955_15150 PF01638 HxlR-like helix-turn-helix At15955_15170 PF17757 UvrB interaction domain At15955_15170 PF02151 UvrB/uvrC motif At15955_15170 PF00271 Helicase conserved C-terminal domain At15955_15170 PF12344 Ultra-violet resistance protein B At15955_15170 PF04851 Type III restriction enzyme, res subunit At15955_15240 PF00226 DnaJ domain At15955_15240 PF01556 DnaJ C terminal domain At15955_15240 PF00684 DnaJ central domain At15955_15260 PF17151 Periplasmic sensor domain At15955_15260 PF00990 Diguanylate cyclase, GGDEF domain At15955_15280 PF00005 ABC transporter At15955_15280 PF08402 TOBE domain At15955_15300 PF01547 Bacterial extracellular solute-binding protein At15955_15310 PF00155 Aminotransferase class I and II At15955_15340 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain At15955_15340 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain At15955_15350 PF00440 Bacterial regulatory proteins, tetR family At15955_15360 PF12833 Helix-turn-helix domain At15955_15360 PF06719 AraC-type transcriptional regulator N-terminus At15955_15370 PF08240 Alcohol dehydrogenase GroES-like domain At15955_15370 PF00107 Zinc-binding dehydrogenase At15955_15380 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_15390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ At15955_15400 PF00196 Bacterial regulatory proteins, luxR family At15955_15400 PF03472 Autoinducer binding domain At15955_15410 PF13538 UvrD-like helicase C-terminal domain At15955_15410 PF14490 Helix-hairpin-helix containing domain At15955_15410 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain At15955_15420 PF08338 Domain of unknown function (DUF1731) At15955_15420 PF01370 NAD dependent epimerase/dehydratase family At15955_15470 PF08281 Sigma-70, region 4 At15955_15470 PF04542 Sigma-70 region 2 At15955_15490 PF01810 LysE type translocator At15955_15500 PF00248 Aldo/keto reductase family At15955_15530 PF10369 Small subunit of acetolactate synthase At15955_15540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At15955_15540 PF00205 Thiamine pyrophosphate enzyme, central domain At15955_15540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At15955_15580 PF13302 Acetyltransferase (GNAT) domain At15955_15600 PF13180 PDZ domain At15955_15610 PF01145 SPFH domain / Band 7 family At15955_15620 PF01145 SPFH domain / Band 7 family At15955_15630 PF00186 Dihydrofolate reductase At15955_15640 PF00303 Thymidylate synthase At15955_15710 PF01565 FAD binding domain At15955_15710 PF02913 FAD linked oxidases, C-terminal domain At15955_15730 PF00873 AcrB/AcrD/AcrF family At15955_15740 PF13533 Biotin-lipoyl like At15955_15760 PF00580 UvrD/REP helicase N-terminal domain At15955_15760 PF13361 UvrD-like helicase C-terminal domain At15955_15780 PF13977 BetI-type transcriptional repressor, C-terminal At15955_15780 PF00440 Bacterial regulatory proteins, tetR family At15955_15790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At15955_15800 PF00561 alpha/beta hydrolase fold At15955_15840 PF00857 Isochorismatase family At15955_15880 PF00557 Metallopeptidase family M24 At15955_15880 PF01321 Creatinase/Prolidase N-terminal domain At15955_15910 PF02630 SCO1/SenC At15955_15930 PF01584 CheW-like domain At15955_15950 PF00929 Exonuclease At15955_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_15960 PF03466 LysR substrate binding domain At15955_15980 PF00583 Acetyltransferase (GNAT) family At15955_16000 PF03120 NAD-dependent DNA ligase OB-fold domain At15955_16000 PF00533 BRCA1 C Terminus (BRCT) domain At15955_16000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain At15955_16000 PF12826 Helix-hairpin-helix motif At15955_16000 PF01653 NAD-dependent DNA ligase adenylation domain At15955_16010 PF01810 LysE type translocator At15955_16020 PF02463 RecF/RecN/SMC N terminal domain At15955_16030 PF13525 Outer membrane lipoprotein At15955_16040 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase At15955_16050 PF00091 Tubulin/FtsZ family, GTPase domain At15955_16050 PF12327 FtsZ family, C-terminal domain At15955_16060 PF02491 SHS2 domain inserted in FTSA At15955_16070 PF03799 Cell division protein FtsQ At15955_16070 PF08478 POTRA domain, FtsQ-type At15955_16080 PF01820 D-ala D-ala ligase N-terminus At15955_16080 PF07478 D-ala D-ala ligase C-terminus At15955_16090 PF07690 Major Facilitator Superfamily At15955_16090 PF00083 Sugar (and other) transporter At15955_16100 PF17158 Membrane-associated sensor, integral membrane domain At15955_16100 PF00990 Diguanylate cyclase, GGDEF domain At15955_16110 PF01565 FAD binding domain At15955_16110 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain At15955_16120 PF08245 Mur ligase middle domain At15955_16120 PF02875 Mur ligase family, glutamate ligase domain At15955_16120 PF01225 Mur ligase family, catalytic domain At15955_16130 PF03033 Glycosyltransferase family 28 N-terminal domain At15955_16130 PF04101 Glycosyltransferase family 28 C-terminal domain At15955_16140 PF01098 Cell cycle protein At15955_16150 PF08245 Mur ligase middle domain At15955_16150 PF02875 Mur ligase family, glutamate ligase domain At15955_16160 PF00953 Glycosyl transferase family 4 At15955_16160 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 At15955_16170 PF02875 Mur ligase family, glutamate ligase domain At15955_16170 PF01225 Mur ligase family, catalytic domain At15955_16170 PF08245 Mur ligase middle domain At15955_16180 PF01225 Mur ligase family, catalytic domain At15955_16180 PF02875 Mur ligase family, glutamate ligase domain At15955_16180 PF08245 Mur ligase middle domain At15955_16190 PF03717 Penicillin-binding Protein dimerisation domain At15955_16190 PF00905 Penicillin binding protein transpeptidase domain At15955_16210 PF01795 MraW methylase family At15955_16220 PF02381 MraZ protein, putative antitoxin-like At15955_16230 PF03994 Domain of Unknown Function (DUF350) At15955_16250 PF03738 Glutathionylspermidine synthase preATP-grasp At15955_16290 PF01510 N-acetylmuramoyl-L-alanine amidase At15955_16300 PF05099 Tellurite resistance protein TerB At15955_16300 PF00226 DnaJ domain At15955_16310 PF00365 Phosphofructokinase At15955_16350 PF13649 Methyltransferase domain At15955_16360 PF01183 Glycosyl hydrolases family 25 At15955_16380 PF02219 Methylenetetrahydrofolate reductase At15955_16390 PF01209 ubiE/COQ5 methyltransferase family At15955_16400 PF00005 ABC transporter At15955_16400 PF12848 ABC transporter At15955_16410 PF12146 Serine aminopeptidase, S33 At15955_16420 PF02515 CoA-transferase family III At15955_16430 PF00205 Thiamine pyrophosphate enzyme, central domain At15955_16430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At15955_16430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At15955_16450 PF01042 Endoribonuclease L-PSP At15955_16480 PF03734 L,D-transpeptidase catalytic domain At15955_16480 PF01476 LysM domain At15955_16490 PF07690 Major Facilitator Superfamily At15955_16510 PF10609 NUBPL iron-transfer P-loop NTPase At15955_16530 PF00465 Iron-containing alcohol dehydrogenase At15955_16540 PF00171 Aldehyde dehydrogenase family At15955_16550 PF03951 Glutamine synthetase, beta-Grasp domain At15955_16550 PF00120 Glutamine synthetase, catalytic domain At15955_16560 PF13520 Amino acid permease At15955_16580 PF01418 Helix-turn-helix domain, rpiR family At15955_16580 PF01380 SIS domain At15955_16620 PF08402 TOBE domain At15955_16620 PF00005 ABC transporter At15955_16630 PF08240 Alcohol dehydrogenase GroES-like domain At15955_16630 PF00107 Zinc-binding dehydrogenase At15955_16660 PF07690 Major Facilitator Superfamily At15955_16670 PF02310 B12 binding domain At15955_16670 PF02607 B12 binding domain At15955_16670 PF02965 Vitamin B12 dependent methionine synthase, activation domain At15955_16670 PF00809 Pterin binding enzyme At15955_16670 PF02574 Homocysteine S-methyltransferase At15955_16710 PF13505 Outer membrane protein beta-barrel domain At15955_16740 PF04402 Protein of unknown function (DUF541) At15955_16760 PF01894 Uncharacterised protein family UPF0047 At15955_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_16770 PF00360 Phytochrome region At15955_16770 PF08446 PAS fold At15955_16770 PF00512 His Kinase A (phospho-acceptor) domain At15955_16770 PF01590 GAF domain At15955_16790 PF04542 Sigma-70 region 2 At15955_16790 PF03979 Sigma-70 factor, region 1.1 At15955_16790 PF00140 Sigma-70 factor, region 1.2 At15955_16790 PF04545 Sigma-70, region 4 At15955_16790 PF04539 Sigma-70 region 3 At15955_16790 PF04546 Sigma-70, non-essential region At15955_16800 PF01807 CHC2 zinc finger At15955_16800 PF08278 DNA primase DnaG DnaB-binding At15955_16800 PF08275 DNA primase catalytic core, N-terminal domain At15955_16800 PF10410 DnaB-helicase binding domain of primase At15955_16820 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain At15955_16820 PF00117 Glutamine amidotransferase class-I At15955_16830 PF01554 MatE At15955_16840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_16840 PF00672 HAMP domain At15955_16840 PF02743 Cache domain At15955_16860 PF04228 Putative neutral zinc metallopeptidase At15955_16890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_16890 PF02142 MGS-like domain At15955_16890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain At15955_16900 PF00990 Diguanylate cyclase, GGDEF domain At15955_16900 PF17158 Membrane-associated sensor, integral membrane domain At15955_16910 PF03167 Uracil DNA glycosylase superfamily At15955_16930 PF01272 Transcription elongation factor, GreA/GreB, C-term At15955_16930 PF03449 Transcription elongation factor, N-terminal At15955_16940 PF00534 Glycosyl transferases group 1 At15955_16950 PF01037 Lrp/AsnC ligand binding domain At15955_16960 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_16970 PF03466 LysR substrate binding domain At15955_16990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_17020 PF03466 LysR substrate binding domain At15955_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_17040 PF01699 Sodium/calcium exchanger protein At15955_17060 PF05231 MASE1 At15955_17060 PF00563 EAL domain At15955_17090 PF00313 'Cold-shock' DNA-binding domain At15955_17100 PF00753 Metallo-beta-lactamase superfamily At15955_17120 PF12802 MarR family At15955_17130 PF00072 Response regulator receiver domain At15955_17130 PF00486 Transcriptional regulatory protein, C terminal At15955_17140 PF16527 Two-component sensor protein CpxA, periplasmic domain At15955_17140 PF00672 HAMP domain At15955_17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_17140 PF00512 His Kinase A (phospho-acceptor) domain At15955_17150 PF01588 Putative tRNA binding domain At15955_17160 PF14748 Pyrroline-5-carboxylate reductase dimerisation At15955_17160 PF03807 NADP oxidoreductase coenzyme F420-dependent At15955_17200 PF01790 Prolipoprotein diacylglyceryl transferase At15955_17250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase At15955_17250 PF14572 Phosphoribosyl synthetase-associated domain At15955_17270 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase At15955_17290 PF00535 Glycosyl transferase family 2 At15955_17300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_17300 PF00672 HAMP domain At15955_17310 PF00171 Aldehyde dehydrogenase family At15955_17320 PF13426 PAS domain At15955_17320 PF00158 Sigma-54 interaction domain At15955_17320 PF02954 Bacterial regulatory protein, Fis family At15955_17330 PF03707 Bacterial signalling protein N terminal repeat At15955_17330 PF00990 Diguanylate cyclase, GGDEF domain At15955_17330 PF00563 EAL domain At15955_17330 PF13188 PAS domain At15955_17340 PF01386 Ribosomal L25p family At15955_17340 PF14693 Ribosomal protein TL5, C-terminal domain At15955_17350 PF08448 PAS fold At15955_17350 PF08447 PAS fold At15955_17350 PF00990 Diguanylate cyclase, GGDEF domain At15955_17350 PF00563 EAL domain At15955_17370 PF01195 Peptidyl-tRNA hydrolase At15955_17390 PF02617 ATP-dependent Clp protease adaptor protein ClpS At15955_17400 PF06071 Protein of unknown function (DUF933) At15955_17400 PF01926 50S ribosome-binding GTPase At15955_17440 PF00156 Phosphoribosyl transferase domain At15955_17460 PF00033 Cytochrome b/b6/petB At15955_17460 PF02167 Cytochrome C1 family At15955_17460 PF00032 Cytochrome b(C-terminal)/b6/petD At15955_17470 PF00033 Cytochrome b/b6/petB At15955_17470 PF00032 Cytochrome b(C-terminal)/b6/petD At15955_17480 PF00355 Rieske [2Fe-2S] domain At15955_17480 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal At15955_17500 PF00664 ABC transporter transmembrane region At15955_17500 PF00005 ABC transporter At15955_17510 PF00664 ABC transporter transmembrane region At15955_17510 PF00005 ABC transporter At15955_17530 PF00588 SpoU rRNA Methylase family At15955_17540 PF02690 Na+/Pi-cotransporter At15955_17560 PF01218 Coproporphyrinogen III oxidase At15955_17590 PF13735 tRNA nucleotidyltransferase domain 2 putative At15955_17590 PF12627 Probable RNA and SrmB- binding site of polymerase A At15955_17590 PF01743 Poly A polymerase head domain At15955_17600 PF00293 NUDIX domain At15955_17620 PF07726 ATPase family associated with various cellular activities (AAA) At15955_17620 PF17863 AAA lid domain At15955_17660 PF00583 Acetyltransferase (GNAT) family At15955_17670 PF07690 Major Facilitator Superfamily At15955_17690 PF13409 Glutathione S-transferase, N-terminal domain At15955_17720 PF08502 LeuA allosteric (dimerisation) domain At15955_17720 PF00682 HMGL-like At15955_17730 PF03594 Benzoate membrane transport protein At15955_17740 PF06532 Negative regulator of sigma F At15955_17750 PF04545 Sigma-70, region 4 At15955_17750 PF04542 Sigma-70 region 2 At15955_17770 PF00574 Clp protease At15955_17780 PF04955 HupE / UreJ protein At15955_17800 PF14489 QueF-like protein At15955_17810 PF01545 Cation efflux family At15955_17810 PF16916 Dimerisation domain of Zinc Transporter At15955_17830 PF13458 Periplasmic binding protein At15955_17850 PF01022 Bacterial regulatory protein, arsR family At15955_17860 PF00571 CBS domain At15955_17860 PF00005 ABC transporter At15955_17870 PF00528 Binding-protein-dependent transport system inner membrane component At15955_17880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At15955_17890 PF00265 Thymidine kinase At15955_17900 PF00127 Copper binding proteins, plastocyanin/azurin family At15955_17920 PF00196 Bacterial regulatory proteins, luxR family At15955_17920 PF03472 Autoinducer binding domain At15955_17930 PF03350 Uncharacterized protein family, UPF0114 At15955_17940 PF07715 TonB-dependent Receptor Plug Domain At15955_17940 PF04886 PT repeat At15955_17940 PF00593 TonB dependent receptor At15955_17960 PF04715 Anthranilate synthase component I, N terminal region At15955_17960 PF00117 Glutamine amidotransferase class-I At15955_17960 PF00425 chorismate binding enzyme At15955_17970 PF11871 Domain of unknown function (DUF3391) At15955_17970 PF01966 HD domain At15955_17980 PF01979 Amidohydrolase family At15955_17980 PF13382 Adenine deaminase C-terminal domain At15955_18000 PF00583 Acetyltransferase (GNAT) family At15955_18010 PF00128 Alpha amylase, catalytic domain At15955_18020 PF00294 pfkB family carbohydrate kinase At15955_18050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal At15955_18050 PF01926 50S ribosome-binding GTPase At15955_18090 PF05992 SbmA/BacA-like family At15955_18110 PF00557 Metallopeptidase family M24 At15955_18140 PF01799 [2Fe-2S] binding domain At15955_18140 PF00111 2Fe-2S iron-sulfur cluster binding domain At15955_18150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At15955_18150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At15955_18180 PF03466 LysR substrate binding domain At15955_18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_18210 PF01979 Amidohydrolase family At15955_18240 PF01070 FMN-dependent dehydrogenase At15955_18250 PF00893 Small Multidrug Resistance protein At15955_18260 PF00440 Bacterial regulatory proteins, tetR family At15955_18260 PF17932 Tetracyclin repressor-like, C-terminal domain At15955_18270 PF00768 D-alanyl-D-alanine carboxypeptidase At15955_18270 PF07943 Penicillin-binding protein 5, C-terminal domain At15955_18290 PF00576 HIUase/Transthyretin family At15955_18300 PF04115 Ureidoglycolate lyase At15955_18330 PF09349 OHCU decarboxylase At15955_18330 PF01014 Uricase At15955_18350 PF06299 Protein of unknown function (DUF1045) At15955_18370 PF05430 S-adenosyl-L-methionine-dependent methyltransferase At15955_18370 PF01266 FAD dependent oxidoreductase At15955_18380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At15955_18380 PF01627 Hpt domain At15955_18380 PF00072 Response regulator receiver domain At15955_18380 PF00512 His Kinase A (phospho-acceptor) domain At15955_18380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_18380 PF00672 HAMP domain At15955_18390 PF00270 DEAD/DEAH box helicase At15955_18390 PF00271 Helicase conserved C-terminal domain At15955_18410 PF07681 DoxX At15955_18420 PF03734 L,D-transpeptidase catalytic domain At15955_18420 PF01476 LysM domain At15955_18440 PF14403 Circularly permuted ATP-grasp type 2 At15955_18450 PF14403 Circularly permuted ATP-grasp type 2 At15955_18450 PF04168 A predicted alpha-helical domain with a conserved ER motif. At15955_18460 PF01841 Transglutaminase-like superfamily At15955_18460 PF08379 Bacterial transglutaminase-like N-terminal region At15955_18500 PF00300 Histidine phosphatase superfamily (branch 1) At15955_18520 PF02653 Branched-chain amino acid transport system / permease component At15955_18530 PF00005 ABC transporter At15955_18540 PF13407 Periplasmic binding protein domain At15955_18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_18550 PF03466 LysR substrate binding domain At15955_18600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_18600 PF00672 HAMP domain At15955_18610 PF02574 Homocysteine S-methyltransferase At15955_18610 PF00809 Pterin binding enzyme At15955_18610 PF02607 B12 binding domain At15955_18610 PF02965 Vitamin B12 dependent methionine synthase, activation domain At15955_18610 PF02310 B12 binding domain At15955_18620 PF00528 Binding-protein-dependent transport system inner membrane component At15955_18630 PF00528 Binding-protein-dependent transport system inner membrane component At15955_18640 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_18650 PF00005 ABC transporter At15955_18690 PF00331 Glycosyl hydrolase family 10 At15955_18700 PF00535 Glycosyl transferase family 2 At15955_18730 PF03808 Glycosyl transferase WecB/TagA/CpsF family At15955_18760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At15955_18760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At15955_18760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At15955_18760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At15955_18770 PF01152 Bacterial-like globin At15955_18810 PF08362 YcdC-like protein, C-terminal region At15955_18810 PF00440 Bacterial regulatory proteins, tetR family At15955_18820 PF07687 Peptidase dimerisation domain At15955_18820 PF01546 Peptidase family M20/M25/M40 At15955_18830 PF01979 Amidohydrolase family At15955_18840 PF00293 NUDIX domain At15955_18850 PF00005 ABC transporter At15955_18860 PF00528 Binding-protein-dependent transport system inner membrane component At15955_18870 PF00528 Binding-protein-dependent transport system inner membrane component At15955_18900 PF00873 AcrB/AcrD/AcrF family At15955_18920 PF00753 Metallo-beta-lactamase superfamily At15955_18930 PF02492 CobW/HypB/UreG, nucleotide-binding domain At15955_18940 PF01730 UreF At15955_18950 PF02814 UreE urease accessory protein, N-terminal domain At15955_18950 PF05194 UreE urease accessory protein, C-terminal domain At15955_18960 PF08534 Redoxin At15955_18980 PF01979 Amidohydrolase family At15955_18980 PF00449 Urease alpha-subunit, N-terminal domain At15955_19000 PF07007 Lysozyme inhibitor LprI At15955_19020 PF00699 Urease beta subunit At15955_19030 PF06906 Protein of unknown function (DUF1272) At15955_19040 PF00547 Urease, gamma subunit At15955_19050 PF01774 UreD urease accessory protein At15955_19070 PF00005 ABC transporter At15955_19080 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_19080 PF00005 ABC transporter At15955_19100 PF02653 Branched-chain amino acid transport system / permease component At15955_19120 PF10931 Protein of unknown function (DUF2735) At15955_19130 PF00120 Glutamine synthetase, catalytic domain At15955_19130 PF03951 Glutamine synthetase, beta-Grasp domain At15955_19150 PF01627 Hpt domain At15955_19150 PF18415 Histidine kinase receptor ArcB trans-membrane domain At15955_19150 PF00512 His Kinase A (phospho-acceptor) domain At15955_19150 PF00989 PAS fold At15955_19150 PF00072 Response regulator receiver domain At15955_19150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_19160 PF00072 Response regulator receiver domain At15955_19190 PF13458 Periplasmic binding protein At15955_19210 PF00005 ABC transporter At15955_19220 PF00005 ABC transporter At15955_19220 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_19230 PF11862 Domain of unknown function (DUF3382) At15955_19230 PF02653 Branched-chain amino acid transport system / permease component At15955_19240 PF02653 Branched-chain amino acid transport system / permease component At15955_19250 PF00459 Inositol monophosphatase family At15955_19310 PF00072 Response regulator receiver domain At15955_19310 PF00486 Transcriptional regulatory protein, C terminal At15955_19350 PF10090 Histidine phosphotransferase C-terminal domain At15955_19380 PF00588 SpoU rRNA Methylase family At15955_19400 PF00849 RNA pseudouridylate synthase At15955_19430 PF04545 Sigma-70, region 4 At15955_19430 PF04542 Sigma-70 region 2 At15955_19430 PF00140 Sigma-70 factor, region 1.2 At15955_19450 PF00709 Adenylosuccinate synthetase At15955_19500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_19520 PF03167 Uracil DNA glycosylase superfamily At15955_19530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_19540 PF04304 Protein of unknown function (DUF454) At15955_19550 PF00005 ABC transporter At15955_19560 PF01032 FecCD transport family At15955_19570 PF01497 Periplasmic binding protein At15955_19600 PF06228 Haem utilisation ChuX/HutX At15955_19620 PF00551 Formyl transferase At15955_19640 PF00512 His Kinase A (phospho-acceptor) domain At15955_19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_19640 PF00672 HAMP domain At15955_19650 PF00072 Response regulator receiver domain At15955_19650 PF00486 Transcriptional regulatory protein, C terminal At15955_19670 PF03401 Tripartite tricarboxylate transporter family receptor At15955_19690 PF01970 Tripartite tricarboxylate transporter TctA family At15955_19720 PF01032 FecCD transport family At15955_19730 PF01032 FecCD transport family At15955_19740 PF00005 ABC transporter At15955_19750 PF00210 Ferritin-like domain At15955_19770 PF00672 HAMP domain At15955_19770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_19780 PF00248 Aldo/keto reductase family At15955_19790 PF07690 Major Facilitator Superfamily At15955_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_19800 PF03466 LysR substrate binding domain At15955_19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_19810 PF03466 LysR substrate binding domain At15955_19830 PF13533 Biotin-lipoyl like At15955_19840 PF00873 AcrB/AcrD/AcrF family At15955_19870 PF13396 Phospholipase_D-nuclease N-terminal At15955_19870 PF13091 PLD-like domain At15955_19880 PF08543 Phosphomethylpyrimidine kinase At15955_19890 PF00484 Carbonic anhydrase At15955_19910 PF02774 Semialdehyde dehydrogenase, dimerisation domain At15955_19910 PF01118 Semialdehyde dehydrogenase, NAD binding domain At15955_19920 PF00083 Sugar (and other) transporter At15955_19930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At15955_19930 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch At15955_19930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain At15955_19940 PF02233 NAD(P) transhydrogenase beta subunit At15955_19950 PF01613 Flavin reductase like domain At15955_19960 PF00881 Nitroreductase family At15955_19970 PF00561 alpha/beta hydrolase fold At15955_19980 PF01042 Endoribonuclease L-PSP At15955_19990 PF00857 Isochorismatase family At15955_20000 PF00296 Luciferase-like monooxygenase At15955_20010 PF01126 Heme oxygenase At15955_20020 PF00701 Dihydrodipicolinate synthetase family At15955_20030 PF07729 FCD domain At15955_20030 PF00392 Bacterial regulatory proteins, gntR family At15955_20050 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20060 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20070 PF17912 MalK OB fold domain At15955_20070 PF03459 TOBE domain At15955_20070 PF00005 ABC transporter At15955_20080 PF00294 pfkB family carbohydrate kinase At15955_20090 PF03576 Peptidase family S58 At15955_20100 PF01063 Amino-transferase class IV At15955_20110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_20110 PF03466 LysR substrate binding domain At15955_20130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_20130 PF00005 ABC transporter At15955_20140 PF00005 ABC transporter At15955_20140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_20160 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_20180 PF01244 Membrane dipeptidase (Peptidase family M19) At15955_20200 PF03706 Lysylphosphatidylglycerol synthase TM region At15955_20200 PF09924 Uncharacterised conserved protein (DUF2156) At15955_20240 PF07690 Major Facilitator Superfamily At15955_20260 PF04444 Catechol dioxygenase N terminus At15955_20260 PF00775 Dioxygenase At15955_20270 PF00465 Iron-containing alcohol dehydrogenase At15955_20280 PF04909 Amidohydrolase At15955_20290 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At15955_20290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_20300 PF01613 Flavin reductase like domain At15955_20330 PF00512 His Kinase A (phospho-acceptor) domain At15955_20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_20340 PF00072 Response regulator receiver domain At15955_20340 PF00486 Transcriptional regulatory protein, C terminal At15955_20360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_20370 PF08402 TOBE domain At15955_20370 PF00005 ABC transporter At15955_20380 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20410 PF00486 Transcriptional regulatory protein, C terminal At15955_20410 PF00072 Response regulator receiver domain At15955_20420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_20420 PF00072 Response regulator receiver domain At15955_20420 PF08448 PAS fold At15955_20420 PF13188 PAS domain At15955_20420 PF00512 His Kinase A (phospho-acceptor) domain At15955_20440 PF13614 AAA domain At15955_20450 PF00072 Response regulator receiver domain At15955_20450 PF01339 CheB methylesterase At15955_20460 PF03705 CheR methyltransferase, all-alpha domain At15955_20460 PF01739 CheR methyltransferase, SAM binding domain At15955_20470 PF01584 CheW-like domain At15955_20480 PF00672 HAMP domain At15955_20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_20480 PF02203 Tar ligand binding domain homologue At15955_20490 PF01584 CheW-like domain At15955_20500 PF02895 Signal transducing histidine kinase, homodimeric domain At15955_20500 PF09078 CheY binding At15955_20500 PF01584 CheW-like domain At15955_20500 PF01627 Hpt domain At15955_20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_20510 PF00072 Response regulator receiver domain At15955_20530 PF00072 Response regulator receiver domain At15955_20540 PF00296 Luciferase-like monooxygenase At15955_20550 PF01613 Flavin reductase like domain At15955_20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_20560 PF03466 LysR substrate binding domain At15955_20570 PF00355 Rieske [2Fe-2S] domain At15955_20580 PF00005 ABC transporter At15955_20590 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_20600 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20610 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20620 PF02913 FAD linked oxidases, C-terminal domain At15955_20620 PF01565 FAD binding domain At15955_20630 PF00155 Aminotransferase class I and II At15955_20640 PF00175 Oxidoreductase NAD-binding domain At15955_20640 PF00970 Oxidoreductase FAD-binding domain At15955_20640 PF00042 Globin At15955_20650 PF01259 SAICAR synthetase At15955_20670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_20670 PF00529 HlyD membrane-fusion protein of T1SS At15955_20680 PF00873 AcrB/AcrD/AcrF family At15955_20690 PF02321 Outer membrane efflux protein At15955_20700 PF09285 Elongation factor P, C-terminal At15955_20700 PF08207 Elongation factor P (EF-P) KOW-like domain At15955_20700 PF01132 Elongation factor P (EF-P) OB domain At15955_20710 PF00152 tRNA synthetases class II (D, K and N) At15955_20720 PF04055 Radical SAM superfamily At15955_20720 PF12544 Lysine-2,3-aminomutase At15955_20750 PF03466 LysR substrate binding domain At15955_20750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_20760 PF01266 FAD dependent oxidoreductase At15955_20780 PF00528 Binding-protein-dependent transport system inner membrane component At15955_20790 PF03459 TOBE domain At15955_20790 PF00005 ABC transporter At15955_20810 PF03576 Peptidase family S58 At15955_20820 PF05690 Thiazole biosynthesis protein ThiG At15955_20840 PF01266 FAD dependent oxidoreductase At15955_20850 PF01964 Radical SAM ThiC family At15955_20850 PF13667 ThiC-associated domain At15955_20860 PF00550 Phosphopantetheine attachment site At15955_20920 PF00664 ABC transporter transmembrane region At15955_20920 PF00005 ABC transporter At15955_20930 PF13545 Crp-like helix-turn-helix domain At15955_20930 PF00027 Cyclic nucleotide-binding domain At15955_20950 PF00672 HAMP domain At15955_20950 PF00211 Adenylate and Guanylate cyclase catalytic domain At15955_20970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At15955_20970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At15955_20970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At15955_20980 PF00534 Glycosyl transferases group 1 At15955_20980 PF13439 Glycosyltransferase Family 4 At15955_21010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_21010 PF00005 ABC transporter At15955_21020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_21030 PF00528 Binding-protein-dependent transport system inner membrane component At15955_21040 PF00528 Binding-protein-dependent transport system inner membrane component At15955_21040 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_21070 PF13439 Glycosyltransferase Family 4 At15955_21070 PF00534 Glycosyl transferases group 1 At15955_21080 PF04101 Glycosyltransferase family 28 C-terminal domain At15955_21080 PF03033 Glycosyltransferase family 28 N-terminal domain At15955_21090 PF03932 CutC family At15955_21120 PF00728 Glycosyl hydrolase family 20, catalytic domain At15955_21120 PF02838 Glycosyl hydrolase family 20, domain 2 At15955_21140 PF01380 SIS domain At15955_21140 PF01418 Helix-turn-helix domain, rpiR family At15955_21160 PF17912 MalK OB fold domain At15955_21160 PF00005 ABC transporter At15955_21170 PF01547 Bacterial extracellular solute-binding protein At15955_21180 PF00528 Binding-protein-dependent transport system inner membrane component At15955_21190 PF00528 Binding-protein-dependent transport system inner membrane component At15955_21220 PF01380 SIS domain At15955_21230 PF01979 Amidohydrolase family At15955_21240 PF00480 ROK family At15955_21250 PF01494 FAD binding domain At15955_21260 PF01569 PAP2 superfamily At15955_21270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain At15955_21270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase At15955_21270 PF13288 DXP reductoisomerase C-terminal domain At15955_21280 PF00155 Aminotransferase class I and II At15955_21300 PF07244 Surface antigen variable number repeat At15955_21300 PF01103 Surface antigen At15955_21300 PF17243 POTRA domain TamA domain 1 At15955_21320 PF01584 CheW-like domain At15955_21330 PF13426 PAS domain At15955_21330 PF08447 PAS fold At15955_21330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_21340 PF02634 FdhD/NarQ family At15955_21360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain At15955_21370 PF02874 ATP synthase alpha/beta family, beta-barrel domain At15955_21370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At15955_21380 PF00231 ATP synthase At15955_21390 PF00306 ATP synthase alpha/beta chain, C terminal domain At15955_21390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At15955_21390 PF02874 ATP synthase alpha/beta family, beta-barrel domain At15955_21400 PF00213 ATP synthase delta (OSCP) subunit At15955_21420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain At15955_21420 PF17764 3′ DNA-binding domain (3′BD) At15955_21420 PF18074 Primosomal protein N C-terminal domain At15955_21420 PF00270 DEAD/DEAH box helicase At15955_21430 PF02899 Phage integrase, N-terminal SAM-like domain At15955_21430 PF00589 Phage integrase family At15955_21470 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_21470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At15955_21480 PF01810 LysE type translocator At15955_21500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At15955_21500 PF02817 e3 binding domain At15955_21500 PF00364 Biotin-requiring enzyme At15955_21510 PF16870 2-oxoglutarate dehydrogenase C-terminal At15955_21510 PF16078 2-oxoglutarate dehydrogenase N-terminus At15955_21510 PF00676 Dehydrogenase E1 component At15955_21510 PF02779 Transketolase, pyrimidine binding domain At15955_21520 PF00549 CoA-ligase At15955_21520 PF02629 CoA binding domain At15955_21530 PF00549 CoA-ligase At15955_21530 PF08442 ATP-grasp domain At15955_21540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain At15955_21540 PF00056 lactate/malate dehydrogenase, NAD binding domain At15955_21550 PF03969 AFG1-like ATPase At15955_21560 PF02974 Protease inhibitor Inh At15955_21570 PF13085 2Fe-2S iron-sulfur cluster binding domain At15955_21570 PF13237 4Fe-4S dicluster domain At15955_21580 PF00890 FAD binding domain At15955_21580 PF02910 Fumarate reductase flavoprotein C-term At15955_21600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit At15955_21650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus At15955_21650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus At15955_21660 PF00814 Glycoprotease family At15955_21670 PF03900 Porphobilinogen deaminase, C-terminal domain At15955_21670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain At15955_21720 PF00117 Glutamine amidotransferase class-I At15955_21740 PF02325 YGGT family At15955_21750 PF02594 Uncharacterised ACR, YggU family COG1872 At15955_21760 PF00719 Inorganic pyrophosphatase At15955_21790 PF01432 Peptidase family M3 At15955_21810 PF01047 MarR family At15955_21820 PF07690 Major Facilitator Superfamily At15955_21830 PF00764 Arginosuccinate synthase At15955_21840 PF00106 short chain dehydrogenase At15955_21850 PF01810 LysE type translocator At15955_21870 PF02653 Branched-chain amino acid transport system / permease component At15955_21890 PF04055 Radical SAM superfamily At15955_21920 PF01329 Pterin 4 alpha carbinolamine dehydratase At15955_21930 PF01451 Low molecular weight phosphotyrosine protein phosphatase At15955_21940 PF02834 LigT like Phosphoesterase At15955_21950 PF13472 GDSL-like Lipase/Acylhydrolase family At15955_21960 PF00005 ABC transporter At15955_21980 PF01027 Inhibitor of apoptosis-promoting Bax1 At15955_22010 PF00694 Aconitase C-terminal domain At15955_22010 PF00330 Aconitase family (aconitate hydratase) At15955_22020 PF00005 ABC transporter At15955_22040 PF03379 CcmB protein At15955_22050 PF01578 Cytochrome C assembly protein At15955_22070 PF08534 Redoxin At15955_22080 PF00990 Diguanylate cyclase, GGDEF domain At15955_22080 PF17151 Periplasmic sensor domain At15955_22090 PF10755 Protein of unknown function (DUF2585) At15955_22100 PF04279 Intracellular septation protein A At15955_22110 PF02881 SRP54-type protein, helical bundle domain At15955_22110 PF00448 SRP54-type protein, GTPase domain At15955_22120 PF04055 Radical SAM superfamily At15955_22120 PF00919 Uncharacterized protein family UPF0004 At15955_22130 PF01678 Diaminopimelate epimerase At15955_22140 PF12706 Beta-lactamase superfamily domain At15955_22150 PF00448 SRP54-type protein, GTPase domain At15955_22150 PF02978 Signal peptide binding domain At15955_22150 PF02881 SRP54-type protein, helical bundle domain At15955_22160 PF01817 Chorismate mutase type II At15955_22160 PF02153 Prephenate dehydrogenase At15955_22170 PF00886 Ribosomal protein S16 At15955_22180 PF05239 PRC-barrel domain At15955_22180 PF01782 RimM N-terminal domain At15955_22190 PF01746 tRNA (Guanine-1)-methyltransferase At15955_22210 PF01245 Ribosomal protein L19 At15955_22220 PF00005 ABC transporter At15955_22220 PF00664 ABC transporter transmembrane region At15955_22230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_22230 PF00529 HlyD membrane-fusion protein of T1SS At15955_22250 PF07690 Major Facilitator Superfamily At15955_22260 PF00330 Aconitase family (aconitate hydratase) At15955_22270 PF01435 Peptidase family M48 At15955_22280 PF00005 ABC transporter At15955_22290 PF00528 Binding-protein-dependent transport system inner membrane component At15955_22300 PF01547 Bacterial extracellular solute-binding protein At15955_22340 PF04204 Homoserine O-succinyltransferase At15955_22350 PF01263 Aldose 1-epimerase At15955_22360 PF00912 Transglycosylase At15955_22370 PF00348 Polyprenyl synthetase At15955_22380 PF00691 OmpA family At15955_22380 PF13488 Glycine zipper At15955_22390 PF04551 GcpE protein At15955_22400 PF07690 Major Facilitator Superfamily At15955_22410 PF00455 DeoR C terminal sensor domain At15955_22410 PF08220 DeoR-like helix-turn-helix domain At15955_22420 PF02785 Biotin carboxylase C-terminal domain At15955_22420 PF00364 Biotin-requiring enzyme At15955_22420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_22420 PF00289 Biotin carboxylase, N-terminal domain At15955_22420 PF00682 HMGL-like At15955_22420 PF02436 Conserved carboxylase domain At15955_22430 PF00072 Response regulator receiver domain At15955_22430 PF00196 Bacterial regulatory proteins, luxR family At15955_22450 PF00664 ABC transporter transmembrane region At15955_22450 PF00005 ABC transporter At15955_22460 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain At15955_22460 PF10091 Putative glucoamylase At15955_22460 PF06165 Glycosyltransferase family 36 At15955_22470 PF01546 Peptidase family M20/M25/M40 At15955_22470 PF07687 Peptidase dimerisation domain At15955_22490 PF01266 FAD dependent oxidoreductase At15955_22500 PF00291 Pyridoxal-phosphate dependent enzyme At15955_22510 PF00920 Dehydratase family At15955_22520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At15955_22520 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At15955_22530 PF01370 NAD dependent epimerase/dehydratase family At15955_22540 PF01565 FAD binding domain At15955_22540 PF02913 FAD linked oxidases, C-terminal domain At15955_22550 PF07729 FCD domain At15955_22550 PF00392 Bacterial regulatory proteins, gntR family At15955_22570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At15955_22580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_22590 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_22600 PF13193 AMP-binding enzyme C-terminal domain At15955_22600 PF00501 AMP-binding enzyme At15955_22600 PF16177 Acetyl-coenzyme A synthetase N-terminus At15955_22620 PF01168 Alanine racemase, N-terminal domain At15955_22630 PF08264 Anticodon-binding domain of tRNA At15955_22630 PF00133 tRNA synthetases class I (I, L, M and V) At15955_22630 PF13603 Leucyl-tRNA synthetase, Domain 2 At15955_22660 PF00037 4Fe-4S binding domain At15955_22660 PF11953 Domain of unknown function (DUF3470) At15955_22670 PF01479 S4 domain At15955_22670 PF00579 tRNA synthetases class I (W and Y) At15955_22690 PF01494 FAD binding domain At15955_22710 PF00543 Nitrogen regulatory protein P-II At15955_22720 PF00909 Ammonium Transporter Family At15955_22730 PF01580 FtsK/SpoIIIE family At15955_22730 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At15955_22730 PF09397 Ftsk gamma domain At15955_22730 PF17854 FtsK alpha domain At15955_22740 PF03548 Outer membrane lipoprotein carrier protein LolA At15955_22770 PF00486 Transcriptional regulatory protein, C terminal At15955_22770 PF00072 Response regulator receiver domain At15955_22790 PF02559 CarD-like/TRCF domain At15955_22800 PF05088 Bacterial NAD-glutamate dehydrogenase At15955_22810 PF11700 Vacuole effluxer Atg22 like At15955_22820 PF05233 PHB accumulation regulatory domain At15955_22820 PF07879 PHB/PHA accumulation regulator DNA-binding domain At15955_22830 PF02803 Thiolase, C-terminal domain At15955_22830 PF00108 Thiolase, N-terminal domain At15955_22860 PF00210 Ferritin-like domain At15955_22870 PF00293 NUDIX domain At15955_22890 PF13180 PDZ domain At15955_22890 PF03572 Peptidase family S41 At15955_22910 PF02590 Predicted SPOUT methyltransferase At15955_22930 PF01467 Cytidylyltransferase-like At15955_22940 PF00171 Aldehyde dehydrogenase family At15955_22950 PF01472 PUA domain At15955_22950 PF00696 Amino acid kinase family At15955_22960 PF01018 GTP1/OBG At15955_22960 PF01926 50S ribosome-binding GTPase At15955_22970 PF13302 Acetyltransferase (GNAT) domain At15955_22990 PF01016 Ribosomal L27 protein At15955_23000 PF00829 Ribosomal prokaryotic L21 protein At15955_23030 PF03328 HpcH/HpaI aldolase/citrate lyase family At15955_23050 PF00694 Aconitase C-terminal domain At15955_23060 PF00180 Isocitrate/isopropylmalate dehydrogenase At15955_23070 PF03150 Di-haem cytochrome c peroxidase At15955_23080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At15955_23080 PF07685 CobB/CobQ-like glutamine amidotransferase domain At15955_23090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_23090 PF14824 Sirohaem biosynthesis protein central At15955_23090 PF10414 Sirohaem synthase dimerisation region At15955_23100 PF01888 CbiD At15955_23110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_23130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_23140 PF02571 Precorrin-6x reductase CbiJ/CobK At15955_23150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_23160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_23170 PF02570 Precorrin-8X methylmutase At15955_23180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At15955_23190 PF02514 CobN/Magnesium Chelatase At15955_23200 PF02492 CobW/HypB/UreG, nucleotide-binding domain At15955_23200 PF07683 Cobalamin synthesis protein cobW C-terminal domain At15955_23220 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP At15955_23220 PF12557 Cob(I)alamin adenosyltransferase N terminal At15955_23230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At15955_23230 PF07685 CobB/CobQ-like glutamine amidotransferase domain At15955_23240 PF03186 CobD/Cbib protein At15955_23250 PF00155 Aminotransferase class I and II At15955_23260 PF13378 Enolase C-terminal domain-like At15955_23260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_23270 PF05336 L-rhamnose mutarotase At15955_23280 PF01232 Mannitol dehydrogenase Rossmann domain At15955_23280 PF08125 Mannitol dehydrogenase C-terminal domain At15955_23290 PF08240 Alcohol dehydrogenase GroES-like domain At15955_23290 PF00107 Zinc-binding dehydrogenase At15955_23310 PF00248 Aldo/keto reductase family At15955_23330 PF02653 Branched-chain amino acid transport system / permease component At15955_23340 PF00005 ABC transporter At15955_23350 PF00392 Bacterial regulatory proteins, gntR family At15955_23350 PF07729 FCD domain At15955_23360 PF08666 SAF domain At15955_23360 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At15955_23370 PF02142 MGS-like domain At15955_23370 PF01808 AICARFT/IMPCHase bienzyme At15955_23390 PF01189 16S rRNA methyltransferase RsmB/F At15955_23390 PF01029 NusB family At15955_23400 PF01435 Peptidase family M48 At15955_23420 PF17762 HTH domain found in ParB protein At15955_23420 PF02195 ParB-like nuclease domain At15955_23430 PF13614 AAA domain At15955_23440 PF02527 rRNA small subunit methyltransferase G At15955_23450 PF01134 Glucose inhibited division protein A At15955_23450 PF13932 GidA associated domain At15955_23460 PF01926 50S ribosome-binding GTPase At15955_23460 PF12631 MnmE helical domain At15955_23460 PF10396 GTP-binding protein TrmE N-terminus At15955_23470 PF07498 Rho termination factor, N-terminal domain At15955_23470 PF07497 Rho termination factor, RNA-binding domain At15955_23470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At15955_23490 PF01208 Uroporphyrinogen decarboxylase (URO-D) At15955_23500 PF03618 Kinase/pyrophosphorylase At15955_23510 PF02545 Maf-like protein At15955_23520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At15955_23520 PF08501 Shikimate dehydrogenase substrate binding domain At15955_23520 PF01488 Shikimate / quinate 5-dehydrogenase At15955_23530 PF01121 Dephospho-CoA kinase At15955_23540 PF00929 Exonuclease At15955_23550 PF02556 Preprotein translocase subunit SecB At15955_23560 PF04186 FxsA cytoplasmic membrane protein At15955_23580 PF03562 MltA specific insert domain At15955_23580 PF06725 3D domain At15955_23610 PF00986 DNA gyrase B subunit, carboxyl terminus At15955_23610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_23610 PF01751 Toprim domain At15955_23610 PF00204 DNA gyrase B At15955_23630 PF01557 Fumarylacetoacetate (FAA) hydrolase family At15955_23660 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase At15955_23670 PF00291 Pyridoxal-phosphate dependent enzyme At15955_23680 PF00290 Tryptophan synthase alpha chain At15955_23690 PF01039 Carboxyl transferase domain At15955_23700 PF08245 Mur ligase middle domain At15955_23710 PF00085 Thioredoxin At15955_23720 PF12705 PD-(D/E)XK nuclease superfamily At15955_23720 PF13361 UvrD-like helicase C-terminal domain At15955_23720 PF00580 UvrD/REP helicase N-terminal domain At15955_23740 PF12804 MobA-like NTP transferase domain At15955_23750 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE At15955_23760 PF00512 His Kinase A (phospho-acceptor) domain At15955_23760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_23770 PF05221 S-adenosyl-L-homocysteine hydrolase At15955_23770 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain At15955_23780 PF00381 PTS HPr component phosphorylation site At15955_23790 PF03610 PTS system fructose IIA component At15955_23790 PF03830 PTS system sorbose subfamily IIB component At15955_23800 PF07475 HPr Serine kinase C-terminal domain At15955_23800 PF02603 HPr Serine kinase N terminus At15955_23810 PF00672 HAMP domain At15955_23810 PF00512 His Kinase A (phospho-acceptor) domain At15955_23810 PF13755 Sensor N-terminal transmembrane domain At15955_23810 PF13756 Stimulus-sensing domain At15955_23810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_23820 PF00486 Transcriptional regulatory protein, C terminal At15955_23820 PF00072 Response regulator receiver domain At15955_23830 PF01293 Phosphoenolpyruvate carboxykinase At15955_23840 PF00472 RF-1 domain At15955_23850 PF01476 LysM domain At15955_23850 PF04972 BON domain At15955_23860 PF00485 Phosphoribulokinase / Uridine kinase family At15955_23870 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase At15955_23880 PF00977 Histidine biosynthesis protein At15955_23890 PF00977 Histidine biosynthesis protein At15955_23900 PF00117 Glutamine amidotransferase class-I At15955_23920 PF00475 Imidazoleglycerol-phosphate dehydratase At15955_23930 PF00227 Proteasome subunit At15955_23940 PF07724 AAA domain (Cdc48 subfamily) At15955_23940 PF00004 ATPase family associated with various cellular activities (AAA) At15955_23940 PF10431 C-terminal, D2-small domain, of ClpB protein At15955_23960 PF01274 Malate synthase At15955_23990 PF00072 Response regulator receiver domain At15955_24000 PF00512 His Kinase A (phospho-acceptor) domain At15955_24000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_24010 PF00270 DEAD/DEAH box helicase At15955_24010 PF00271 Helicase conserved C-terminal domain At15955_24010 PF04408 Helicase associated domain (HA2) At15955_24010 PF08482 ATP-dependent helicase C-terminal At15955_24020 PF00570 HRDC domain At15955_24020 PF00271 Helicase conserved C-terminal domain At15955_24020 PF00270 DEAD/DEAH box helicase At15955_24020 PF09382 RQC domain At15955_24020 PF16124 RecQ zinc-binding At15955_24030 PF00480 ROK family At15955_24040 PF13407 Periplasmic binding protein domain At15955_24050 PF02653 Branched-chain amino acid transport system / permease component At15955_24060 PF00005 ABC transporter At15955_24070 PF00485 Phosphoribulokinase / Uridine kinase family At15955_24080 PF00462 Glutaredoxin At15955_24090 PF07972 NrdI Flavodoxin like At15955_24100 PF02867 Ribonucleotide reductase, barrel domain At15955_24100 PF00317 Ribonucleotide reductase, all-alpha domain At15955_24100 PF08343 Ribonucleotide reductase N-terminal At15955_24110 PF00268 Ribonucleotide reductase, small chain At15955_24130 PF02463 RecF/RecN/SMC N terminal domain At15955_24140 PF00581 Rhodanese-like domain At15955_24140 PF00899 ThiF family At15955_24160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At15955_24160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_24180 PF00294 pfkB family carbohydrate kinase At15955_24200 PF05175 Methyltransferase small domain At15955_24200 PF08468 Methyltransferase small domain N-terminal At15955_24210 PF00013 KH domain At15955_24210 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain At15955_24210 PF01138 3' exoribonuclease family, domain 1 At15955_24210 PF00575 S1 RNA binding domain At15955_24210 PF03725 3' exoribonuclease family, domain 2 At15955_24220 PF00312 Ribosomal protein S15 At15955_24230 PF01509 TruB family pseudouridylate synthase (N terminal domain) At15955_24230 PF09157 Pseudouridine synthase II TruB, C-terminal At15955_24230 PF16198 tRNA pseudouridylate synthase B C-terminal domain At15955_24240 PF02033 Ribosome-binding factor A At15955_24250 PF11987 Translation-initiation factor 2 At15955_24250 PF00009 Elongation factor Tu GTP binding domain At15955_24250 PF03144 Elongation factor Tu domain 2 At15955_24250 PF08364 Bacterial translation initiation factor IF-2 associated region At15955_24250 PF04760 Translation initiation factor IF-2, N-terminal region At15955_24270 PF00575 S1 RNA binding domain At15955_24270 PF08529 NusA N-terminal domain At15955_24270 PF13184 NusA-like KH domain At15955_24280 PF02576 RimP N-terminal domain At15955_24280 PF17384 RimP C-terminal SH3 domain At15955_24290 PF05977 Transmembrane secretion effector At15955_24310 PF13406 Transglycosylase SLT domain At15955_24320 PF13662 Toprim domain At15955_24320 PF02132 RecR protein At15955_24340 PF02575 YbaB/EbfC DNA-binding family At15955_24350 PF12170 DNA polymerase III tau subunit V interacting with alpha At15955_24350 PF12169 DNA polymerase III subunits gamma and tau domain III At15955_24350 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding At15955_24370 PF09297 NADH pyrophosphatase zinc ribbon domain At15955_24370 PF00293 NUDIX domain At15955_24370 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain At15955_24380 PF00800 Prephenate dehydratase At15955_24380 PF01817 Chorismate mutase type II At15955_24390 PF02348 Cytidylyltransferase At15955_24400 PF00034 Cytochrome c At15955_24410 PF02397 Bacterial sugar transferase At15955_24420 PF00912 Transglycosylase At15955_24420 PF00905 Penicillin binding protein transpeptidase domain At15955_24430 PF04073 Aminoacyl-tRNA editing domain At15955_24440 PF00313 'Cold-shock' DNA-binding domain At15955_24450 PF01546 Peptidase family M20/M25/M40 At15955_24450 PF07687 Peptidase dimerisation domain At15955_24460 PF01047 MarR family At15955_24470 PF01612 3'-5' exonuclease At15955_24470 PF00476 DNA polymerase family A At15955_24470 PF01367 5'-3' exonuclease, C-terminal SAM fold At15955_24470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain At15955_24490 PF01783 Ribosomal L32p protein family At15955_24500 PF02743 Cache domain At15955_24500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_24500 PF00512 His Kinase A (phospho-acceptor) domain At15955_24510 PF00158 Sigma-54 interaction domain At15955_24510 PF00072 Response regulator receiver domain At15955_24510 PF02954 Bacterial regulatory protein, Fis family At15955_24520 PF03401 Tripartite tricarboxylate transporter family receptor At15955_24530 PF07331 Tripartite tricarboxylate transporter TctB family At15955_24540 PF01970 Tripartite tricarboxylate transporter TctA family At15955_24550 PF04102 SlyX At15955_24570 PF01556 DnaJ C terminal domain At15955_24570 PF00226 DnaJ domain At15955_24570 PF00684 DnaJ central domain At15955_24580 PF00012 Hsp70 protein At15955_24600 PF01625 Peptide methionine sulfoxide reductase At15955_24650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At15955_24660 PF01048 Phosphorylase superfamily At15955_24670 PF01791 DeoC/LacD family aldolase At15955_24680 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain At15955_24680 PF00591 Glycosyl transferase family, a/b domain At15955_24680 PF02885 Glycosyl transferase family, helical bundle domain At15955_24710 PF00962 Adenosine/AMP deaminase At15955_24720 PF01676 Metalloenzyme superfamily At15955_24740 PF03626 Prokaryotic Cytochrome C oxidase subunit IV At15955_24750 PF00510 Cytochrome c oxidase subunit III At15955_24760 PF00115 Cytochrome C and Quinol oxidase polypeptide I At15955_24770 PF06481 COX Aromatic Rich Motif At15955_24770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At15955_24780 PF00083 Sugar (and other) transporter At15955_24780 PF07690 Major Facilitator Superfamily At15955_24790 PF00310 Glutamine amidotransferases class-II At15955_24790 PF01493 GXGXG motif At15955_24790 PF04898 Glutamate synthase central domain At15955_24790 PF01645 Conserved region in glutamate synthase At15955_24800 PF00175 Oxidoreductase NAD-binding domain At15955_24800 PF00667 FAD binding domain At15955_24800 PF00258 Flavodoxin At15955_24840 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_24840 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_24850 PF07977 FabA-like domain At15955_24880 PF03458 UPF0126 domain At15955_24900 PF06912 Protein of unknown function (DUF1275) At15955_24920 PF00528 Binding-protein-dependent transport system inner membrane component At15955_24930 PF00005 ABC transporter At15955_24940 PF00392 Bacterial regulatory proteins, gntR family At15955_24940 PF07702 UTRA domain At15955_24950 PF01618 MotA/TolQ/ExbB proton channel family At15955_24960 PF02472 Biopolymer transport protein ExbD/TolR At15955_24990 PF02615 Malate/L-lactate dehydrogenase At15955_25020 PF00625 Guanylate kinase At15955_25030 PF07969 Amidohydrolase family At15955_25040 PF06299 Protein of unknown function (DUF1045) At15955_25050 PF00528 Binding-protein-dependent transport system inner membrane component At15955_25060 PF00528 Binding-protein-dependent transport system inner membrane component At15955_25080 PF00005 ABC transporter At15955_25100 PF00005 ABC transporter At15955_25110 PF00005 ABC transporter At15955_25120 PF06007 Phosphonate metabolism protein PhnJ At15955_25140 PF05861 Bacterial phosphonate metabolism protein (PhnI) At15955_25150 PF05845 Bacterial phosphonate metabolism protein (PhnH) At15955_25160 PF06754 Phosphonate metabolism protein PhnG At15955_25170 PF00392 Bacterial regulatory proteins, gntR family At15955_25170 PF07702 UTRA domain At15955_25180 PF05173 Dihydrodipicolinate reductase, C-terminus At15955_25180 PF01113 Dihydrodipicolinate reductase, N-terminus At15955_25190 PF02685 Glucokinase At15955_25200 PF02142 MGS-like domain At15955_25210 PF03411 Penicillin-insensitive murein endopeptidase At15955_25220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_25230 PF00528 Binding-protein-dependent transport system inner membrane component At15955_25240 PF00528 Binding-protein-dependent transport system inner membrane component At15955_25240 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_25250 PF00005 ABC transporter At15955_25250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_25260 PF01266 FAD dependent oxidoreductase At15955_25270 PF00120 Glutamine synthetase, catalytic domain At15955_25280 PF01266 FAD dependent oxidoreductase At15955_25300 PF00528 Binding-protein-dependent transport system inner membrane component At15955_25310 PF00005 ABC transporter At15955_25320 PF00528 Binding-protein-dependent transport system inner membrane component At15955_25330 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At15955_25350 PF02082 Transcriptional regulator At15955_25360 PF13416 Bacterial extracellular solute-binding protein At15955_25370 PF00171 Aldehyde dehydrogenase family At15955_25390 PF03466 LysR substrate binding domain At15955_25390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_25400 PF00892 EamA-like transporter family At15955_25430 PF00877 NlpC/P60 family At15955_25450 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family At15955_25450 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain At15955_25460 PF02789 Cytosol aminopeptidase family, N-terminal domain At15955_25460 PF00883 Cytosol aminopeptidase family, catalytic domain At15955_25500 PF00437 Type II/IV secretion system protein At15955_25530 PF00263 Bacterial type II and III secretion system protein At15955_25530 PF04972 BON domain At15955_25530 PF13629 Pilus formation protein N terminal region At15955_25610 PF07411 Domain of unknown function (DUF1508) At15955_25620 PF01183 Glycosyl hydrolases family 25 At15955_25630 PF00892 EamA-like transporter family At15955_25640 PF00155 Aminotransferase class I and II At15955_25640 PF00392 Bacterial regulatory proteins, gntR family At15955_25700 PF06421 GTP-binding protein LepA C-terminus At15955_25700 PF00009 Elongation factor Tu GTP binding domain At15955_25700 PF03144 Elongation factor Tu domain 2 At15955_25700 PF00679 Elongation factor G C-terminus At15955_25710 PF00795 Carbon-nitrogen hydrolase At15955_25770 PF12833 Helix-turn-helix domain At15955_25770 PF02311 AraC-like ligand binding domain At15955_25780 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_25830 PF05198 Translation initiation factor IF-3, N-terminal domain At15955_25830 PF00707 Translation initiation factor IF-3, C-terminal domain At15955_25840 PF01632 Ribosomal protein L35 At15955_25850 PF00453 Ribosomal protein L20 At15955_25870 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain At15955_25870 PF01409 tRNA synthetases class II core domain (F) At15955_25880 PF03484 tRNA synthetase B5 domain At15955_25880 PF03147 Ferredoxin-fold anticodon binding domain At15955_25880 PF03483 B3/4 domain At15955_25880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain At15955_25880 PF01588 Putative tRNA binding domain At15955_25890 PF00248 Aldo/keto reductase family At15955_25900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_25900 PF03466 LysR substrate binding domain At15955_25930 PF12833 Helix-turn-helix domain At15955_25930 PF01965 DJ-1/PfpI family At15955_25950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_25950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_25980 PF13742 OB-fold nucleic acid binding domain At15955_25980 PF02601 Exonuclease VII, large subunit At15955_25990 PF13378 Enolase C-terminal domain-like At15955_25990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_26000 PF00392 Bacterial regulatory proteins, gntR family At15955_26000 PF07729 FCD domain At15955_26010 PF01047 MarR family At15955_26020 PF00892 EamA-like transporter family At15955_26030 PF02073 Thermophilic metalloprotease (M29) At15955_26040 PF04073 Aminoacyl-tRNA editing domain At15955_26050 PF03960 ArsC family At15955_26080 PF00958 GMP synthase C terminal domain At15955_26080 PF00117 Glutamine amidotransferase class-I At15955_26110 PF03073 TspO/MBR family At15955_26160 PF01029 NusB family At15955_26160 PF01189 16S rRNA methyltransferase RsmB/F At15955_26170 PF03330 Lytic transglycolase At15955_26190 PF08331 Domain of unknown function (DUF1730) At15955_26200 PF00043 Glutathione S-transferase, C-terminal domain At15955_26200 PF13417 Glutathione S-transferase, N-terminal domain At15955_26210 PF02673 Bacitracin resistance protein BacA At15955_26240 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family At15955_26260 PF13649 Methyltransferase domain At15955_26270 PF00712 DNA polymerase III beta subunit, N-terminal domain At15955_26270 PF02767 DNA polymerase III beta subunit, central domain At15955_26270 PF02768 DNA polymerase III beta subunit, C-terminal domain At15955_26280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_26290 PF02021 Uncharacterised protein family UPF0102 At15955_26300 PF14602 Hexapeptide repeat of succinyl-transferase At15955_26300 PF12464 Maltose acetyltransferase At15955_26310 PF13416 Bacterial extracellular solute-binding protein At15955_26320 PF00528 Binding-protein-dependent transport system inner membrane component At15955_26330 PF00528 Binding-protein-dependent transport system inner membrane component At15955_26340 PF00005 ABC transporter At15955_26360 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At15955_26360 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At15955_26370 PF13335 Magnesium chelatase, subunit ChlI C-terminal At15955_26370 PF01078 Magnesium chelatase, subunit ChlI At15955_26380 PF00291 Pyridoxal-phosphate dependent enzyme At15955_26390 PF01810 LysE type translocator At15955_26400 PF00692 dUTPase At15955_26410 PF00009 Elongation factor Tu GTP binding domain At15955_26410 PF03144 Elongation factor Tu domain 2 At15955_26410 PF16658 Class II release factor RF3, C-terminal domain At15955_26420 PF04127 DNA / pantothenate metabolism flavoprotein At15955_26420 PF02441 Flavoprotein At15955_26450 PF03109 ABC1 family At15955_26460 PF01209 ubiE/COQ5 methyltransferase family At15955_26470 PF06827 Zinc finger found in FPG and IleRS At15955_26470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain At15955_26470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain At15955_26480 PF00378 Enoyl-CoA hydratase/isomerase At15955_26490 PF01649 Ribosomal protein S20 At15955_26550 PF09217 Restriction endonuclease EcoRII, N-terminal At15955_26550 PF09019 EcoRII C terminal At15955_26560 PF03852 DNA mismatch endonuclease Vsr At15955_26570 PF00145 C-5 cytosine-specific DNA methylase At15955_26570 PF18284 DNA methylase N-terminal domain At15955_26670 PF01443 Viral (Superfamily 1) RNA helicase At15955_26670 PF03389 MobA/MobL family At15955_26670 PF17841 BID domain of Bartonella effector protein (Bep) At15955_26730 PF13289 SIR2-like domain At15955_26770 PF13007 Transposase C of IS166 homeodomain At15955_26770 PF13005 zinc-finger binding domain of transposase IS66 At15955_26770 PF13817 IS66 C-terminal element At15955_26770 PF03050 Transposase IS66 family At15955_26780 PF05717 IS66 Orf2 like protein At15955_26870 PF00589 Phage integrase family At15955_26910 PF07690 Major Facilitator Superfamily At15955_26950 PF17991 Thioredoxin like C-terminal domain At15955_26950 PF02683 Cytochrome C biogenesis protein transmembrane region At15955_26950 PF00578 AhpC/TSA family At15955_26970 PF00561 alpha/beta hydrolase fold At15955_26980 PF00072 Response regulator receiver domain At15955_26980 PF00486 Transcriptional regulatory protein, C terminal At15955_26990 PF00512 His Kinase A (phospho-acceptor) domain At15955_26990 PF00672 HAMP domain At15955_26990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_27040 PF02566 OsmC-like protein At15955_27060 PF04199 Putative cyclase At15955_27080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_27090 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At15955_27090 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_27110 PF09339 IclR helix-turn-helix domain At15955_27110 PF01614 Bacterial transcriptional regulator At15955_27130 PF00501 AMP-binding enzyme At15955_27130 PF13193 AMP-binding enzyme C-terminal domain At15955_27180 PF01037 Lrp/AsnC ligand binding domain At15955_27190 PF02538 Hydantoinase B/oxoprolinase At15955_27200 PF01968 Hydantoinase/oxoprolinase At15955_27200 PF05378 Hydantoinase/oxoprolinase N-terminal region At15955_27240 PF01968 Hydantoinase/oxoprolinase At15955_27240 PF05378 Hydantoinase/oxoprolinase N-terminal region At15955_27250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_27260 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27270 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_27270 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_27280 PF00005 ABC transporter At15955_27290 PF01266 FAD dependent oxidoreductase At15955_27300 PF10415 Fumarase C C-terminus At15955_27300 PF00206 Lyase At15955_27310 PF01266 FAD dependent oxidoreductase At15955_27320 PF00005 ABC transporter At15955_27330 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27340 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27350 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_27370 PF00106 short chain dehydrogenase At15955_27370 PF00300 Histidine phosphatase superfamily (branch 1) At15955_27380 PF01266 FAD dependent oxidoreductase At15955_27390 PF00392 Bacterial regulatory proteins, gntR family At15955_27390 PF07729 FCD domain At15955_27400 PF00005 ABC transporter At15955_27400 PF17912 MalK OB fold domain At15955_27410 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27420 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27430 PF01547 Bacterial extracellular solute-binding protein At15955_27440 PF16889 Heparinase II/III N-terminus At15955_27440 PF07940 Heparinase II/III-like protein At15955_27470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_27470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At15955_27490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_27490 PF13378 Enolase C-terminal domain-like At15955_27510 PF00011 Hsp20/alpha crystallin family At15955_27530 PF00534 Glycosyl transferases group 1 At15955_27530 PF13439 Glycosyltransferase Family 4 At15955_27540 PF00534 Glycosyl transferases group 1 At15955_27540 PF13439 Glycosyltransferase Family 4 At15955_27580 PF00953 Glycosyl transferase family 4 At15955_27600 PF13439 Glycosyltransferase Family 4 At15955_27600 PF00534 Glycosyl transferases group 1 At15955_27640 PF08448 PAS fold At15955_27640 PF03705 CheR methyltransferase, all-alpha domain At15955_27640 PF01339 CheB methylesterase At15955_27640 PF01739 CheR methyltransferase, SAM binding domain At15955_27650 PF00196 Bacterial regulatory proteins, luxR family At15955_27650 PF00072 Response regulator receiver domain At15955_27660 PF00202 Aminotransferase class-III At15955_27670 PF01370 NAD dependent epimerase/dehydratase family At15955_27680 PF09940 Domain of unknown function (DUF2172) At15955_27680 PF16254 Domain of unknown function (DUF4910) At15955_27680 PF16221 winged helix-turn-helix At15955_27690 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At15955_27700 PF08484 C-methyltransferase C-terminal domain At15955_27700 PF08421 Putative zinc binding domain At15955_27710 PF00483 Nucleotidyl transferase At15955_27720 PF02585 GlcNAc-PI de-N-acetylase At15955_27730 PF00072 Response regulator receiver domain At15955_27730 PF00196 Bacterial regulatory proteins, luxR family At15955_27770 PF12708 Pectate lyase superfamily protein At15955_27770 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At15955_27770 PF13229 Right handed beta helix region At15955_27780 PF01370 NAD dependent epimerase/dehydratase family At15955_27790 PF16363 GDP-mannose 4,6 dehydratase At15955_27810 PF03466 LysR substrate binding domain At15955_27810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_27820 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At15955_27830 PF07690 Major Facilitator Superfamily At15955_27860 PF06472 ABC transporter transmembrane region 2 At15955_27860 PF00005 ABC transporter At15955_27870 PF00990 Diguanylate cyclase, GGDEF domain At15955_27870 PF08448 PAS fold At15955_27890 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At15955_27890 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At15955_27900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At15955_27900 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At15955_27910 PF09137 Glucodextranase, domain N At15955_27910 PF00723 Glycosyl hydrolases family 15 At15955_27920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_27920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_27930 PF04324 BFD-like [2Fe-2S] binding domain At15955_27930 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_27940 PF04324 BFD-like [2Fe-2S] binding domain At15955_27940 PF01266 FAD dependent oxidoreductase At15955_27950 PF05985 Ethanolamine ammonia-lyase light chain (EutC) At15955_27960 PF06751 Ethanolamine ammonia lyase large subunit (EutB) At15955_27970 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27980 PF00528 Binding-protein-dependent transport system inner membrane component At15955_27990 PF00005 ABC transporter At15955_27990 PF08402 TOBE domain At15955_28020 PF00795 Carbon-nitrogen hydrolase At15955_28030 PF03466 LysR substrate binding domain At15955_28030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_28050 PF01266 FAD dependent oxidoreductase At15955_28060 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_28060 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28070 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_28090 PF01266 FAD dependent oxidoreductase At15955_28100 PF00300 Histidine phosphatase superfamily (branch 1) At15955_28100 PF00106 short chain dehydrogenase At15955_28120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_28120 PF00005 ABC transporter At15955_28140 PF01037 Lrp/AsnC ligand binding domain At15955_28150 PF01053 Cys/Met metabolism PLP-dependent enzyme At15955_28170 PF07690 Major Facilitator Superfamily At15955_28180 PF03466 LysR substrate binding domain At15955_28180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_28220 PF03466 LysR substrate binding domain At15955_28220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_28240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_28250 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28270 PF00005 ABC transporter At15955_28270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_28280 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain At15955_28280 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal At15955_28280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At15955_28290 PF00313 'Cold-shock' DNA-binding domain At15955_28310 PF00158 Sigma-54 interaction domain At15955_28310 PF02954 Bacterial regulatory protein, Fis family At15955_28310 PF00072 Response regulator receiver domain At15955_28320 PF00072 Response regulator receiver domain At15955_28330 PF00512 His Kinase A (phospho-acceptor) domain At15955_28330 PF00072 Response regulator receiver domain At15955_28330 PF00989 PAS fold At15955_28330 PF01627 Hpt domain At15955_28330 PF18415 Histidine kinase receptor ArcB trans-membrane domain At15955_28330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_28340 PF00005 ABC transporter At15955_28340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_28370 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_28390 PF07729 FCD domain At15955_28390 PF00392 Bacterial regulatory proteins, gntR family At15955_28400 PF00144 Beta-lactamase At15955_28410 PF03466 LysR substrate binding domain At15955_28410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_28470 PF08281 Sigma-70, region 4 At15955_28470 PF04542 Sigma-70 region 2 At15955_28480 PF01177 Asp/Glu/Hydantoin racemase At15955_28490 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28500 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28520 PF00005 ABC transporter At15955_28520 PF08402 TOBE domain At15955_28530 PF00005 ABC transporter At15955_28540 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28550 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28560 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_28570 PF00392 Bacterial regulatory proteins, gntR family At15955_28570 PF07729 FCD domain At15955_28590 PF00743 Flavin-binding monooxygenase-like At15955_28600 PF00107 Zinc-binding dehydrogenase At15955_28600 PF08240 Alcohol dehydrogenase GroES-like domain At15955_28610 PF00158 Sigma-54 interaction domain At15955_28610 PF02954 Bacterial regulatory protein, Fis family At15955_28610 PF01590 GAF domain At15955_28640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_28640 PF08447 PAS fold At15955_28640 PF13426 PAS domain At15955_28670 PF13416 Bacterial extracellular solute-binding protein At15955_28680 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28690 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28700 PF00005 ABC transporter At15955_28700 PF17912 MalK OB fold domain At15955_28710 PF00296 Luciferase-like monooxygenase At15955_28720 PF09084 NMT1/THI5 like At15955_28730 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28740 PF00005 ABC transporter At15955_28750 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28760 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28780 PF00005 ABC transporter At15955_28780 PF17912 MalK OB fold domain At15955_28790 PF06964 Alpha-L-arabinofuranosidase C-terminal domain At15955_28820 PF00356 Bacterial regulatory proteins, lacI family At15955_28840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At15955_28840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_28840 PF01842 ACT domain At15955_28850 PF01261 Xylose isomerase-like TIM barrel At15955_28860 PF00005 ABC transporter At15955_28860 PF17912 MalK OB fold domain At15955_28860 PF03459 TOBE domain At15955_28870 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28880 PF00528 Binding-protein-dependent transport system inner membrane component At15955_28890 PF13416 Bacterial extracellular solute-binding protein At15955_28900 PF00440 Bacterial regulatory proteins, tetR family At15955_28900 PF17938 Tetracyclin repressor-like, C-terminal domain At15955_28910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_28910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_28940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_28940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_28960 PF00313 'Cold-shock' DNA-binding domain At15955_28980 PF01165 Ribosomal protein S21 At15955_29060 PF00550 Phosphopantetheine attachment site At15955_29070 PF00005 ABC transporter At15955_29070 PF02687 FtsX-like permease family At15955_29070 PF12704 MacB-like periplasmic core domain At15955_29080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_29110 PF00486 Transcriptional regulatory protein, C terminal At15955_29110 PF00072 Response regulator receiver domain At15955_29120 PF00512 His Kinase A (phospho-acceptor) domain At15955_29120 PF00672 HAMP domain At15955_29120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_29130 PF07470 Glycosyl Hydrolase Family 88 At15955_29140 PF00295 Glycosyl hydrolases family 28 At15955_29170 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29180 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29190 PF02311 AraC-like ligand binding domain At15955_29190 PF12833 Helix-turn-helix domain At15955_29200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_29220 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_29230 PF04909 Amidohydrolase At15955_29240 PF13378 Enolase C-terminal domain-like At15955_29240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_29250 PF00701 Dihydrodipicolinate synthetase family At15955_29270 PF04962 KduI/IolB family At15955_29280 PF01370 NAD dependent epimerase/dehydratase family At15955_29290 PF07729 FCD domain At15955_29290 PF00392 Bacterial regulatory proteins, gntR family At15955_29320 PF00248 Aldo/keto reductase family At15955_29330 PF00005 ABC transporter At15955_29330 PF17912 MalK OB fold domain At15955_29340 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29350 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29380 PF12833 Helix-turn-helix domain At15955_29380 PF02311 AraC-like ligand binding domain At15955_29390 PF07690 Major Facilitator Superfamily At15955_29400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_29400 PF03466 LysR substrate binding domain At15955_29410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_29430 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_29440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At15955_29440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At15955_29470 PF00356 Bacterial regulatory proteins, lacI family At15955_29480 PF08240 Alcohol dehydrogenase GroES-like domain At15955_29480 PF16912 Glucose dehydrogenase C-terminus At15955_29510 PF00294 pfkB family carbohydrate kinase At15955_29520 PF08013 Tagatose 6 phosphate kinase At15955_29530 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29540 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29550 PF00005 ABC transporter At15955_29550 PF08402 TOBE domain At15955_29560 PF00005 ABC transporter At15955_29560 PF17912 MalK OB fold domain At15955_29570 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29580 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29600 PF01053 Cys/Met metabolism PLP-dependent enzyme At15955_29620 PF01297 Zinc-uptake complex component A periplasmic At15955_29630 PF00950 ABC 3 transport family At15955_29640 PF00005 ABC transporter At15955_29650 PF02492 CobW/HypB/UreG, nucleotide-binding domain At15955_29650 PF07683 Cobalamin synthesis protein cobW C-terminal domain At15955_29680 PF07683 Cobalamin synthesis protein cobW C-terminal domain At15955_29680 PF02492 CobW/HypB/UreG, nucleotide-binding domain At15955_29690 PF13416 Bacterial extracellular solute-binding protein At15955_29700 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29710 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29720 PF08402 TOBE domain At15955_29720 PF00005 ABC transporter At15955_29740 PF03922 OmpW family At15955_29780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At15955_29780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At15955_29790 PF03466 LysR substrate binding domain At15955_29790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_29800 PF13407 Periplasmic binding protein domain At15955_29810 PF02653 Branched-chain amino acid transport system / permease component At15955_29820 PF00005 ABC transporter At15955_29830 PF00990 Diguanylate cyclase, GGDEF domain At15955_29830 PF00563 EAL domain At15955_29830 PF08448 PAS fold At15955_29830 PF08447 PAS fold At15955_29830 PF13426 PAS domain At15955_29830 PF05231 MASE1 At15955_29840 PF05899 Protein of unknown function (DUF861) At15955_29840 PF07883 Cupin domain At15955_29860 PF08447 PAS fold At15955_29860 PF00563 EAL domain At15955_29860 PF00990 Diguanylate cyclase, GGDEF domain At15955_29860 PF08448 PAS fold At15955_29870 PF02615 Malate/L-lactate dehydrogenase At15955_29880 PF01580 FtsK/SpoIIIE family At15955_29880 PF09397 Ftsk gamma domain At15955_29880 PF17854 FtsK alpha domain At15955_29880 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At15955_29890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_29900 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29910 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_29910 PF00528 Binding-protein-dependent transport system inner membrane component At15955_29920 PF00005 ABC transporter At15955_29920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_29930 PF00005 ABC transporter At15955_29930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_29940 PF00266 Aminotransferase class-V At15955_29960 PF00920 Dehydratase family At15955_29970 PF13407 Periplasmic binding protein domain At15955_29980 PF00005 ABC transporter At15955_29990 PF02653 Branched-chain amino acid transport system / permease component At15955_30000 PF02653 Branched-chain amino acid transport system / permease component At15955_30010 PF00392 Bacterial regulatory proteins, gntR family At15955_30010 PF07729 FCD domain At15955_30020 PF07690 Major Facilitator Superfamily At15955_30040 PF07733 Bacterial DNA polymerase III alpha NTPase domain At15955_30040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At15955_30040 PF14579 Helix-hairpin-helix motif At15955_30040 PF02811 PHP domain At15955_30040 PF01336 OB-fold nucleic acid binding domain At15955_30080 PF05161 MOFRL family At15955_30080 PF13660 Domain of unknown function (DUF4147) At15955_30100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_30100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_30120 PF17912 MalK OB fold domain At15955_30120 PF03459 TOBE domain At15955_30120 PF00005 ABC transporter At15955_30130 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30140 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30150 PF01547 Bacterial extracellular solute-binding protein At15955_30170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_30190 PF01425 Amidase At15955_30200 PF00990 Diguanylate cyclase, GGDEF domain At15955_30200 PF08447 PAS fold At15955_30200 PF08448 PAS fold At15955_30200 PF00563 EAL domain At15955_30230 PF03776 Septum formation topological specificity factor MinE At15955_30240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At15955_30250 PF05209 Septum formation inhibitor MinC, N-terminal domain At15955_30250 PF03775 Septum formation inhibitor MinC, C-terminal domain At15955_30260 PF13419 Haloacid dehalogenase-like hydrolase At15955_30270 PF07729 FCD domain At15955_30270 PF00392 Bacterial regulatory proteins, gntR family At15955_30280 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_30300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_30310 PF08240 Alcohol dehydrogenase GroES-like domain At15955_30310 PF00107 Zinc-binding dehydrogenase At15955_30320 PF03786 D-mannonate dehydratase (UxuA) At15955_30340 PF00171 Aldehyde dehydrogenase family At15955_30350 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_30360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_30370 PF00296 Luciferase-like monooxygenase At15955_30400 PF02798 Glutathione S-transferase, N-terminal domain At15955_30400 PF00043 Glutathione S-transferase, C-terminal domain At15955_30410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_30410 PF00005 ABC transporter At15955_30420 PF03841 L-seryl-tRNA selenium transferase At15955_30450 PF01979 Amidohydrolase family At15955_30460 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_30460 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30470 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_30490 PF00534 Glycosyl transferases group 1 At15955_30490 PF13439 Glycosyltransferase Family 4 At15955_30520 PF02563 Polysaccharide biosynthesis/export protein At15955_30530 PF13533 Biotin-lipoyl like At15955_30540 PF00873 AcrB/AcrD/AcrF family At15955_30570 PF01613 Flavin reductase like domain At15955_30580 PF00248 Aldo/keto reductase family At15955_30590 PF00296 Luciferase-like monooxygenase At15955_30610 PF00005 ABC transporter At15955_30610 PF08402 TOBE domain At15955_30620 PF01547 Bacterial extracellular solute-binding protein At15955_30630 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30640 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30650 PF01055 Glycosyl hydrolases family 31 At15955_30670 PF00528 Binding-protein-dependent transport system inner membrane component At15955_30680 PF09084 NMT1/THI5 like At15955_30690 PF02110 Hydroxyethylthiazole kinase family At15955_30700 PF02581 Thiamine monophosphate synthase At15955_30710 PF08543 Phosphomethylpyrimidine kinase At15955_30730 PF01037 Lrp/AsnC ligand binding domain At15955_30740 PF00842 Alanine racemase, C-terminal domain At15955_30740 PF01168 Alanine racemase, N-terminal domain At15955_30750 PF01266 FAD dependent oxidoreductase At15955_30780 PF02954 Bacterial regulatory protein, Fis family At15955_30780 PF00072 Response regulator receiver domain At15955_30780 PF00158 Sigma-54 interaction domain At15955_30790 PF00512 His Kinase A (phospho-acceptor) domain At15955_30790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_30800 PF00375 Sodium:dicarboxylate symporter family At15955_30810 PF00892 EamA-like transporter family At15955_30820 PF00202 Aminotransferase class-III At15955_30870 PF01270 Glycosyl hydrolases family 8 At15955_30890 PF00535 Glycosyl transferase family 2 At15955_30890 PF07238 PilZ domain At15955_30950 PF16363 GDP-mannose 4,6 dehydratase At15955_30960 PF16363 GDP-mannose 4,6 dehydratase At15955_30980 PF00196 Bacterial regulatory proteins, luxR family At15955_31010 PF00664 ABC transporter transmembrane region At15955_31010 PF00005 ABC transporter At15955_31020 PF00529 HlyD membrane-fusion protein of T1SS At15955_31050 PF02563 Polysaccharide biosynthesis/export protein At15955_31060 PF02397 Bacterial sugar transferase At15955_31080 PF00202 Aminotransferase class-III At15955_31090 PF00672 HAMP domain At15955_31090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_31100 PF17969 L,D-transpeptidase C-terminal domain At15955_31100 PF03734 L,D-transpeptidase catalytic domain At15955_31140 PF02245 Methylpurine-DNA glycosylase (MPG) At15955_31170 PF00356 Bacterial regulatory proteins, lacI family At15955_31180 PF01547 Bacterial extracellular solute-binding protein At15955_31190 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31200 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31210 PF17912 MalK OB fold domain At15955_31210 PF03459 TOBE domain At15955_31210 PF00005 ABC transporter At15955_31230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_31230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_31240 PF04055 Radical SAM superfamily At15955_31250 PF01242 6-pyruvoyl tetrahydropterin synthase At15955_31260 PF06508 Queuosine biosynthesis protein QueC At15955_31280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_31280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_31300 PF17912 MalK OB fold domain At15955_31300 PF00005 ABC transporter At15955_31310 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31330 PF01547 Bacterial extracellular solute-binding protein At15955_31350 PF01050 Mannose-6-phosphate isomerase At15955_31350 PF00483 Nucleotidyl transferase At15955_31360 PF01011 PQQ enzyme repeat At15955_31380 PF03466 LysR substrate binding domain At15955_31380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_31390 PF01515 Phosphate acetyl/butaryl transferase At15955_31390 PF03949 Malic enzyme, NAD binding domain At15955_31390 PF00390 Malic enzyme, N-terminal domain At15955_31400 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_31410 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31420 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31430 PF00005 ABC transporter At15955_31440 PF03972 MmgE/PrpD family At15955_31460 PF08447 PAS fold At15955_31460 PF13426 PAS domain At15955_31460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_31470 PF01266 FAD dependent oxidoreductase At15955_31500 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At15955_31510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At15955_31520 PF03480 Bacterial extracellular solute-binding protein, family 7 At15955_31530 PF07722 Peptidase C26 At15955_31540 PF02653 Branched-chain amino acid transport system / permease component At15955_31550 PF00005 ABC transporter At15955_31560 PF13407 Periplasmic binding protein domain At15955_31570 PF01546 Peptidase family M20/M25/M40 At15955_31580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_31600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_31600 PF00005 ABC transporter At15955_31620 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_31630 PF03466 LysR substrate binding domain At15955_31640 PF01112 Asparaginase At15955_31670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_31700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_31700 PF00005 ABC transporter At15955_31720 PF00528 Binding-protein-dependent transport system inner membrane component At15955_31730 PF00072 Response regulator receiver domain At15955_31730 PF00196 Bacterial regulatory proteins, luxR family At15955_31740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_31740 PF00529 HlyD membrane-fusion protein of T1SS At15955_31750 PF00005 ABC transporter At15955_31750 PF00664 ABC transporter transmembrane region At15955_31790 PF12680 SnoaL-like domain At15955_31790 PF08281 Sigma-70, region 4 At15955_31790 PF04542 Sigma-70 region 2 At15955_31800 PF00005 ABC transporter At15955_31810 PF01032 FecCD transport family At15955_31840 PF01209 ubiE/COQ5 methyltransferase family At15955_31850 PF00127 Copper binding proteins, plastocyanin/azurin family At15955_31860 PF00005 ABC transporter At15955_31870 PF01032 FecCD transport family At15955_31900 PF01546 Peptidase family M20/M25/M40 At15955_31900 PF07687 Peptidase dimerisation domain At15955_31910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_31940 PF00171 Aldehyde dehydrogenase family At15955_31950 PF00180 Isocitrate/isopropylmalate dehydrogenase At15955_31960 PF00171 Aldehyde dehydrogenase family At15955_31970 PF01266 FAD dependent oxidoreductase At15955_32000 PF00202 Aminotransferase class-III At15955_32020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_32030 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32040 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32040 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_32050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_32050 PF00005 ABC transporter At15955_32060 PF01037 Lrp/AsnC ligand binding domain At15955_32070 PF01266 FAD dependent oxidoreductase At15955_32100 PF00005 ABC transporter At15955_32120 PF01546 Peptidase family M20/M25/M40 At15955_32120 PF07687 Peptidase dimerisation domain At15955_32130 PF00296 Luciferase-like monooxygenase At15955_32140 PF00296 Luciferase-like monooxygenase At15955_32150 PF02082 Transcriptional regulator At15955_32170 PF01613 Flavin reductase like domain At15955_32180 PF00296 Luciferase-like monooxygenase At15955_32210 PF00296 Luciferase-like monooxygenase At15955_32220 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_32220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_32220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_32240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_32250 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32260 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32270 PF00005 ABC transporter At15955_32270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_32280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_32280 PF00005 ABC transporter At15955_32290 PF00248 Aldo/keto reductase family At15955_32310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_32310 PF03466 LysR substrate binding domain At15955_32350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_32360 PF01546 Peptidase family M20/M25/M40 At15955_32360 PF07687 Peptidase dimerisation domain At15955_32370 PF00296 Luciferase-like monooxygenase At15955_32380 PF05368 NmrA-like family At15955_32410 PF00296 Luciferase-like monooxygenase At15955_32430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_32430 PF13378 Enolase C-terminal domain-like At15955_32450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_32460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_32460 PF00005 ABC transporter At15955_32470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_32470 PF00005 ABC transporter At15955_32480 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32480 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_32490 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32510 PF00392 Bacterial regulatory proteins, gntR family At15955_32510 PF07729 FCD domain At15955_32530 PF00561 alpha/beta hydrolase fold At15955_32540 PF00106 short chain dehydrogenase At15955_32560 PF04273 Putative phosphatase (DUF442) At15955_32560 PF00753 Metallo-beta-lactamase superfamily At15955_32580 PF04143 Sulphur transport At15955_32600 PF01676 Metalloenzyme superfamily At15955_32600 PF06415 BPG-independent PGAM N-terminus (iPGM_N) At15955_32610 PF02817 e3 binding domain At15955_32610 PF00364 Biotin-requiring enzyme At15955_32610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At15955_32620 PF02780 Transketolase, C-terminal domain At15955_32620 PF02779 Transketolase, pyrimidine binding domain At15955_32630 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal At15955_32630 PF00676 Dehydrogenase E1 component At15955_32640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_32640 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_32640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_32650 PF00108 Thiolase, N-terminal domain At15955_32650 PF02803 Thiolase, C-terminal domain At15955_32660 PF01037 Lrp/AsnC ligand binding domain At15955_32670 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_32670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_32670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_32680 PF01039 Carboxyl transferase domain At15955_32690 PF00289 Biotin carboxylase, N-terminal domain At15955_32690 PF02785 Biotin carboxylase C-terminal domain At15955_32690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_32690 PF00364 Biotin-requiring enzyme At15955_32700 PF00682 HMGL-like At15955_32710 PF00378 Enoyl-CoA hydratase/isomerase At15955_32720 PF02569 Pantoate-beta-alanine ligase At15955_32730 PF02548 Ketopantoate hydroxymethyltransferase At15955_32740 PF01261 Xylose isomerase-like TIM barrel At15955_32750 PF00596 Class II Aldolase and Adducin N-terminal domain At15955_32760 PF08220 DeoR-like helix-turn-helix domain At15955_32760 PF00455 DeoR C terminal sensor domain At15955_32770 PF13407 Periplasmic binding protein domain At15955_32780 PF00005 ABC transporter At15955_32790 PF02653 Branched-chain amino acid transport system / permease component At15955_32800 PF02653 Branched-chain amino acid transport system / permease component At15955_32810 PF05336 L-rhamnose mutarotase At15955_32830 PF00561 alpha/beta hydrolase fold At15955_32850 PF00563 EAL domain At15955_32850 PF08447 PAS fold At15955_32850 PF08448 PAS fold At15955_32850 PF00990 Diguanylate cyclase, GGDEF domain At15955_32870 PF00171 Aldehyde dehydrogenase family At15955_32880 PF08713 DNA alkylation repair enzyme At15955_32890 PF00005 ABC transporter At15955_32900 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32910 PF00528 Binding-protein-dependent transport system inner membrane component At15955_32930 PF00378 Enoyl-CoA hydratase/isomerase At15955_32960 PF08241 Methyltransferase domain At15955_32980 PF00795 Carbon-nitrogen hydrolase At15955_32990 PF00462 Glutaredoxin At15955_33010 PF08241 Methyltransferase domain At15955_33040 PF00293 NUDIX domain At15955_33050 PF00583 Acetyltransferase (GNAT) family At15955_33050 PF13508 Acetyltransferase (GNAT) domain At15955_33060 PF01960 ArgJ family At15955_33080 PF01043 SecA preprotein cross-linking domain At15955_33080 PF02810 SEC-C motif At15955_33080 PF07516 SecA Wing and Scaffold domain At15955_33080 PF07517 SecA DEAD-like domain At15955_33100 PF01757 Acyltransferase family At15955_33210 PF01943 Polysaccharide biosynthesis protein At15955_33230 PF00534 Glycosyl transferases group 1 At15955_33230 PF13579 Glycosyl transferase 4-like domain At15955_33250 PF01757 Acyltransferase family At15955_33270 PF13614 AAA domain At15955_33310 PF13439 Glycosyltransferase Family 4 At15955_33310 PF00534 Glycosyl transferases group 1 At15955_33320 PF13439 Glycosyltransferase Family 4 At15955_33320 PF00534 Glycosyl transferases group 1 At15955_33350 PF01272 Transcription elongation factor, GreA/GreB, C-term At15955_33350 PF03449 Transcription elongation factor, N-terminal At15955_33360 PF00722 Glycosyl hydrolases family 16 At15955_33360 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At15955_33380 PF03009 Glycerophosphoryl diester phosphodiesterase family At15955_33390 PF17912 MalK OB fold domain At15955_33390 PF00005 ABC transporter At15955_33400 PF00528 Binding-protein-dependent transport system inner membrane component At15955_33410 PF00528 Binding-protein-dependent transport system inner membrane component At15955_33430 PF00480 ROK family At15955_33430 PF01047 MarR family At15955_33480 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding At15955_33510 PF01381 Helix-turn-helix At15955_33530 PF00005 ABC transporter At15955_33540 PF02653 Branched-chain amino acid transport system / permease component At15955_33550 PF13407 Periplasmic binding protein domain At15955_33570 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At15955_33570 PF01266 FAD dependent oxidoreductase At15955_33600 PF02785 Biotin carboxylase C-terminal domain At15955_33600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_33600 PF00364 Biotin-requiring enzyme At15955_33600 PF00289 Biotin carboxylase, N-terminal domain At15955_33610 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family At15955_33630 PF02798 Glutathione S-transferase, N-terminal domain At15955_33640 PF01039 Carboxyl transferase domain At15955_33650 PF01381 Helix-turn-helix At15955_33650 PF09856 Predicted transcriptional regulator (DUF2083) At15955_33650 PF06114 IrrE N-terminal-like domain At15955_33660 PF00730 HhH-GPD superfamily base excision DNA repair protein At15955_33660 PF06029 AlkA N-terminal domain At15955_33660 PF02805 Metal binding domain of Ada At15955_33660 PF12833 Helix-turn-helix domain At15955_33670 PF00749 tRNA synthetases class I (E and Q), catalytic domain At15955_33690 PF00106 short chain dehydrogenase At15955_33710 PF01923 Cobalamin adenosyltransferase At15955_33730 PF01012 Electron transfer flavoprotein domain At15955_33740 PF01012 Electron transfer flavoprotein domain At15955_33740 PF00766 Electron transfer flavoprotein FAD-binding domain At15955_33750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At15955_33750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At15955_33760 PF08534 Redoxin At15955_33770 PF00206 Lyase At15955_33770 PF14698 Argininosuccinate lyase C-terminal At15955_33790 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At15955_33790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At15955_33810 PF00072 Response regulator receiver domain At15955_33820 PF00156 Phosphoribosyl transferase domain At15955_33840 PF00005 ABC transporter At15955_33880 PF04752 ChaC-like protein At15955_33910 PF02153 Prephenate dehydrogenase At15955_33920 PF00155 Aminotransferase class I and II At15955_33930 PF01209 ubiE/COQ5 methyltransferase family At15955_33940 PF16123 Hydroxyacylglutathione hydrolase C-terminus At15955_33940 PF00753 Metallo-beta-lactamase superfamily At15955_33980 PF02592 Putative vitamin uptake transporter At15955_34010 PF06213 Cobalamin biosynthesis protein CobT At15955_34010 PF11775 Cobalamin biosynthesis protein CobT VWA domain At15955_34020 PF08406 CbbQ/NirQ/NorQ C-terminal At15955_34020 PF07728 AAA domain (dynein-related subfamily) At15955_34020 PF12556 Cobaltochelatase CobS subunit N terminal At15955_34030 PF00226 DnaJ domain At15955_34040 PF01722 BolA-like protein At15955_34050 PF01761 3-dehydroquinate synthase At15955_34060 PF01202 Shikimate kinase At15955_34080 PF02899 Phage integrase, N-terminal SAM-like domain At15955_34080 PF00589 Phage integrase family At15955_34090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit At15955_34100 PF03734 L,D-transpeptidase catalytic domain At15955_34110 PF01206 Sulfurtransferase TusA At15955_34120 PF07683 Cobalamin synthesis protein cobW C-terminal domain At15955_34120 PF02492 CobW/HypB/UreG, nucleotide-binding domain At15955_34130 PF07943 Penicillin-binding protein 5, C-terminal domain At15955_34130 PF00768 D-alanyl-D-alanine carboxypeptidase At15955_34140 PF07687 Peptidase dimerisation domain At15955_34140 PF01546 Peptidase family M20/M25/M40 At15955_34160 PF00905 Penicillin binding protein transpeptidase domain At15955_34160 PF00912 Transglycosylase At15955_34160 PF06832 Penicillin-Binding Protein C-terminus Family At15955_34170 PF17962 Bacterial macroglobulin domain 6 At15955_34170 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain At15955_34170 PF11974 Bacterial alpha-2-macroglobulin MG3 domain At15955_34170 PF07703 Alpha-2-macroglobulin bait region domain At15955_34170 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain At15955_34170 PF00207 Alpha-2-macroglobulin family At15955_34170 PF01835 MG2 domain At15955_34170 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain At15955_34170 PF07678 A-macroglobulin TED domain At15955_34180 PF03966 Trm112p-like protein At15955_34200 PF00085 Thioredoxin At15955_34260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At15955_34260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_34260 PF01842 ACT domain At15955_34280 PF13505 Outer membrane protein beta-barrel domain At15955_34290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At15955_34290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At15955_34290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At15955_34290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At15955_34300 PF06480 FtsH Extracellular At15955_34300 PF01434 Peptidase family M41 At15955_34300 PF17862 AAA+ lid domain At15955_34300 PF00004 ATPase family associated with various cellular activities (AAA) At15955_34310 PF01171 PP-loop family At15955_34330 PF00691 OmpA family At15955_34340 PF04052 TolB amino-terminal domain At15955_34340 PF07676 WD40-like Beta Propeller Repeat At15955_34360 PF02472 Biopolymer transport protein ExbD/TolR At15955_34370 PF01618 MotA/TolQ/ExbB proton channel family At15955_34380 PF03061 Thioesterase superfamily At15955_34390 PF00293 NUDIX domain At15955_34400 PF00293 NUDIX domain At15955_34430 PF05491 RuvB C-terminal winged helix domain At15955_34430 PF17864 RuvB AAA lid domain At15955_34430 PF05496 Holliday junction DNA helicase RuvB P-loop domain At15955_34440 PF01330 RuvA N terminal domain At15955_34440 PF07499 RuvA, C-terminal domain At15955_34450 PF02075 Crossover junction endodeoxyribonuclease RuvC At15955_34460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_34460 PF00672 HAMP domain At15955_34470 PF00296 Luciferase-like monooxygenase At15955_34480 PF01709 Transcriptional regulator At15955_34510 PF13277 YmdB-like protein At15955_34530 PF00571 CBS domain At15955_34530 PF03471 Transporter associated domain At15955_34530 PF01595 Cyclin M transmembrane N-terminal domain At15955_34560 PF02779 Transketolase, pyrimidine binding domain At15955_34560 PF00456 Transketolase, thiamine diphosphate binding domain At15955_34560 PF02780 Transketolase, C-terminal domain At15955_34570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain At15955_34570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain At15955_34590 PF00999 Sodium/hydrogen exchanger family At15955_34590 PF03471 Transporter associated domain At15955_34600 PF00162 Phosphoglycerate kinase At15955_34610 PF00274 Fructose-bisphosphate aldolase class-I At15955_34660 PF01197 Ribosomal protein L31 At15955_34670 PF00664 ABC transporter transmembrane region At15955_34670 PF00005 ABC transporter At15955_34680 PF00890 FAD binding domain At15955_34690 PF00691 OmpA family At15955_34690 PF01389 OmpA-like transmembrane domain At15955_34710 PF00459 Inositol monophosphatase family At15955_34770 PF00731 AIR carboxylase At15955_34780 PF02222 ATP-grasp domain At15955_34780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain At15955_34790 PF00444 Ribosomal protein L36 At15955_34810 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) At15955_34850 PF00224 Pyruvate kinase, barrel domain At15955_34850 PF02887 Pyruvate kinase, alpha/beta domain At15955_34860 PF05951 Bacterial protein of unknown function (DUF882) At15955_34870 PF00158 Sigma-54 interaction domain At15955_34870 PF00072 Response regulator receiver domain At15955_34870 PF02954 Bacterial regulatory protein, Fis family At15955_34880 PF01432 Peptidase family M3 At15955_34880 PF08439 Oligopeptidase F At15955_34890 PF01063 Amino-transferase class IV At15955_34900 PF00990 Diguanylate cyclase, GGDEF domain At15955_34900 PF08448 PAS fold At15955_34910 PF03435 Saccharopine dehydrogenase NADP binding domain At15955_34910 PF16653 Saccharopine dehydrogenase C-terminal domain At15955_34930 PF00149 Calcineurin-like phosphoesterase At15955_34930 PF02872 5'-nucleotidase, C-terminal domain At15955_34940 PF00762 Ferrochelatase At15955_34950 PF16200 C-terminal region of band_7 At15955_34950 PF01145 SPFH domain / Band 7 family At15955_34970 PF01380 SIS domain At15955_34970 PF00571 CBS domain At15955_35000 PF00483 Nucleotidyl transferase At15955_35010 PF13406 Transglycosylase SLT domain At15955_35030 PF00072 Response regulator receiver domain At15955_35030 PF00486 Transcriptional regulatory protein, C terminal At15955_35040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_35040 PF00672 HAMP domain At15955_35040 PF00512 His Kinase A (phospho-acceptor) domain At15955_35050 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_35050 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster At15955_35060 PF04898 Glutamate synthase central domain At15955_35060 PF01645 Conserved region in glutamate synthase At15955_35060 PF01493 GXGXG motif At15955_35060 PF00310 Glutamine amidotransferases class-II At15955_35070 PF01212 Beta-eliminating lyase At15955_35080 PF00072 Response regulator receiver domain At15955_35080 PF00486 Transcriptional regulatory protein, C terminal At15955_35090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_35090 PF13493 Domain of unknown function (DUF4118) At15955_35090 PF13492 GAF domain At15955_35090 PF00512 His Kinase A (phospho-acceptor) domain At15955_35090 PF02702 Osmosensitive K+ channel His kinase sensor domain At15955_35100 PF02669 K+-transporting ATPase, c chain At15955_35130 PF03814 Potassium-transporting ATPase A subunit At15955_35150 PF17763 Glutaminase/Asparaginase C-terminal domain At15955_35150 PF00710 Asparaginase, N-terminal At15955_35160 PF00324 Amino acid permease At15955_35170 PF00206 Lyase At15955_35170 PF10415 Fumarase C C-terminus At15955_35180 PF07729 FCD domain At15955_35180 PF00392 Bacterial regulatory proteins, gntR family At15955_35190 PF00873 AcrB/AcrD/AcrF family At15955_35210 PF13533 Biotin-lipoyl like At15955_35220 PF13977 BetI-type transcriptional repressor, C-terminal At15955_35220 PF00440 Bacterial regulatory proteins, tetR family At15955_35230 PF00487 Fatty acid desaturase At15955_35270 PF03466 LysR substrate binding domain At15955_35270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_35300 PF00005 ABC transporter At15955_35300 PF08402 TOBE domain At15955_35310 PF00528 Binding-protein-dependent transport system inner membrane component At15955_35320 PF00528 Binding-protein-dependent transport system inner membrane component At15955_35350 PF00171 Aldehyde dehydrogenase family At15955_35360 PF00296 Luciferase-like monooxygenase At15955_35370 PF01613 Flavin reductase like domain At15955_35380 PF12697 Alpha/beta hydrolase family At15955_35400 PF00465 Iron-containing alcohol dehydrogenase At15955_35410 PF00005 ABC transporter At15955_35440 PF07729 FCD domain At15955_35440 PF00392 Bacterial regulatory proteins, gntR family At15955_35450 PF00551 Formyl transferase At15955_35460 PF00120 Glutamine synthetase, catalytic domain At15955_35470 PF01645 Conserved region in glutamate synthase At15955_35480 PF01493 GXGXG motif At15955_35620 PF00701 Dihydrodipicolinate synthetase family At15955_35630 PF00005 ABC transporter At15955_35630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_35650 PF00528 Binding-protein-dependent transport system inner membrane component At15955_35660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_35680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At15955_35690 PF00465 Iron-containing alcohol dehydrogenase At15955_35700 PF07729 FCD domain At15955_35700 PF00392 Bacterial regulatory proteins, gntR family At15955_35740 PF03061 Thioesterase superfamily At15955_35780 PF04168 A predicted alpha-helical domain with a conserved ER motif. At15955_35780 PF14403 Circularly permuted ATP-grasp type 2 At15955_35790 PF01841 Transglutaminase-like superfamily At15955_35790 PF08379 Bacterial transglutaminase-like N-terminal region At15955_35810 PF12848 ABC transporter At15955_35810 PF00005 ABC transporter At15955_35820 PF01070 FMN-dependent dehydrogenase At15955_35830 PF01047 MarR family At15955_35840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_35840 PF00672 HAMP domain At15955_35850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_35850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_35860 PF01791 DeoC/LacD family aldolase At15955_35870 PF01266 FAD dependent oxidoreductase At15955_35870 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At15955_35880 PF00248 Aldo/keto reductase family At15955_35900 PF02653 Branched-chain amino acid transport system / permease component At15955_35910 PF00005 ABC transporter At15955_35930 PF00072 Response regulator receiver domain At15955_35950 PF00459 Inositol monophosphatase family At15955_35970 PF00011 Hsp20/alpha crystallin family At15955_35980 PF13593 SBF-like CPA transporter family (DUF4137) At15955_35990 PF03466 LysR substrate binding domain At15955_35990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_36000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_36000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_36030 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36040 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36050 PF17912 MalK OB fold domain At15955_36050 PF00005 ABC transporter At15955_36060 PF08402 TOBE domain At15955_36060 PF00005 ABC transporter At15955_36070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At15955_36070 PF01266 FAD dependent oxidoreductase At15955_36080 PF00455 DeoR C terminal sensor domain At15955_36080 PF08220 DeoR-like helix-turn-helix domain At15955_36090 PF14824 Sirohaem biosynthesis protein central At15955_36090 PF10414 Sirohaem synthase dimerisation region At15955_36090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At15955_36100 PF04324 BFD-like [2Fe-2S] binding domain At15955_36100 PF01568 Molydopterin dinucleotide binding domain At15955_36100 PF00384 Molybdopterin oxidoreductase At15955_36100 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At15955_36130 PF04324 BFD-like [2Fe-2S] binding domain At15955_36130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain At15955_36130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At15955_36130 PF18267 Rubredoxin NAD+ reductase C-terminal domain At15955_36130 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_36140 PF00005 ABC transporter At15955_36150 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36180 PF08376 Nitrate and nitrite sensing At15955_36180 PF03861 ANTAR domain At15955_36190 PF07729 FCD domain At15955_36190 PF00392 Bacterial regulatory proteins, gntR family At15955_36200 PF01566 Natural resistance-associated macrophage protein At15955_36210 PF03746 LamB/YcsF family At15955_36220 PF07286 Protein of unknown function (DUF1445) At15955_36230 PF02682 Carboxyltransferase domain, subdomain C and D At15955_36240 PF02785 Biotin carboxylase C-terminal domain At15955_36240 PF00289 Biotin carboxylase, N-terminal domain At15955_36240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_36240 PF00364 Biotin-requiring enzyme At15955_36250 PF00128 Alpha amylase, catalytic domain At15955_36250 PF02806 Alpha amylase, C-terminal all-beta domain At15955_36260 PF00376 MerR family regulatory protein At15955_36260 PF09278 MerR, DNA binding At15955_36270 PF07715 TonB-dependent Receptor Plug Domain At15955_36270 PF00593 TonB dependent receptor At15955_36280 PF00591 Glycosyl transferase family, a/b domain At15955_36280 PF02885 Glycosyl transferase family, helical bundle domain At15955_36290 PF06772 Bacterial low temperature requirement A protein (LtrA) At15955_36320 PF11800 Replication protein C C-terminal region At15955_36320 PF03428 Replication protein C N-terminal domain At15955_36330 PF07506 RepB plasmid partitioning protein At15955_36330 PF02195 ParB-like nuclease domain At15955_36340 PF13614 AAA domain At15955_36360 PF01042 Endoribonuclease L-PSP At15955_36370 PF01168 Alanine racemase, N-terminal domain At15955_36370 PF14031 Putative serine dehydratase domain At15955_36380 PF07171 MlrC C-terminus At15955_36380 PF07364 Metallopeptidase family M81 At15955_36390 PF05962 HutD At15955_36400 PF12697 Alpha/beta hydrolase family At15955_36410 PF01175 Urocanase Rossmann-like domain At15955_36410 PF17392 Urocanase C-terminal domain At15955_36410 PF17391 Urocanase N-terminal domain At15955_36430 PF00221 Aromatic amino acid lyase At15955_36440 PF01979 Amidohydrolase family At15955_36450 PF01979 Amidohydrolase family At15955_36460 PF00392 Bacterial regulatory proteins, gntR family At15955_36460 PF07702 UTRA domain At15955_36470 PF00364 Biotin-requiring enzyme At15955_36480 PF02785 Biotin carboxylase C-terminal domain At15955_36480 PF00289 Biotin carboxylase, N-terminal domain At15955_36480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At15955_36510 PF02626 Carboxyltransferase domain, subdomain A and B At15955_36520 PF03746 LamB/YcsF family At15955_36540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_36540 PF03466 LysR substrate binding domain At15955_36550 PF00106 short chain dehydrogenase At15955_36560 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36570 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36580 PF00005 ABC transporter At15955_36590 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_36600 PF03737 Aldolase/RraA At15955_36620 PF00005 ABC transporter At15955_36630 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36640 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36650 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_36660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_36660 PF03466 LysR substrate binding domain At15955_36690 PF03358 NADPH-dependent FMN reductase At15955_36700 PF03960 ArsC family At15955_36710 PF01758 Sodium Bile acid symporter family At15955_36730 PF03737 Aldolase/RraA At15955_36740 PF01370 NAD dependent epimerase/dehydratase family At15955_36750 PF00920 Dehydratase family At15955_36760 PF00005 ABC transporter At15955_36760 PF17912 MalK OB fold domain At15955_36760 PF03459 TOBE domain At15955_36770 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36780 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_36800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_36810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_36810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_36820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_36820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_36830 PF07729 FCD domain At15955_36830 PF00392 Bacterial regulatory proteins, gntR family At15955_36850 PF00293 NUDIX domain At15955_36860 PF02567 Phenazine biosynthesis-like protein At15955_36880 PF01494 FAD binding domain At15955_36890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_36890 PF03466 LysR substrate binding domain At15955_36900 PF07690 Major Facilitator Superfamily At15955_36910 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At15955_36920 PF00296 Luciferase-like monooxygenase At15955_36940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_36940 PF00005 ABC transporter At15955_36950 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36960 PF00528 Binding-protein-dependent transport system inner membrane component At15955_36970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_36980 PF01568 Molydopterin dinucleotide binding domain At15955_36980 PF00384 Molybdopterin oxidoreductase At15955_36990 PF02913 FAD linked oxidases, C-terminal domain At15955_36990 PF01565 FAD binding domain At15955_37000 PF01323 DSBA-like thioredoxin domain At15955_37030 PF00512 His Kinase A (phospho-acceptor) domain At15955_37030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_37030 PF00672 HAMP domain At15955_37040 PF00072 Response regulator receiver domain At15955_37040 PF00486 Transcriptional regulatory protein, C terminal At15955_37050 PF01569 PAP2 superfamily At15955_37140 PF13673 Acetyltransferase (GNAT) domain At15955_37150 PF06968 Biotin and Thiamin Synthesis associated domain At15955_37150 PF04055 Radical SAM superfamily At15955_37160 PF00155 Aminotransferase class I and II At15955_37180 PF00202 Aminotransferase class-III At15955_37190 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At15955_37190 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At15955_37210 PF00491 Arginase family At15955_37220 PF02423 Ornithine cyclodeaminase/mu-crystallin family At15955_37230 PF00892 EamA-like transporter family At15955_37240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_37240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_37260 PF00211 Adenylate and Guanylate cyclase catalytic domain At15955_37280 PF11972 HTH DNA binding domain At15955_37280 PF07756 Protein of unknown function (DUF1612) At15955_37290 PF00083 Sugar (and other) transporter At15955_37300 PF00512 His Kinase A (phospho-acceptor) domain At15955_37300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_37310 PF00486 Transcriptional regulatory protein, C terminal At15955_37310 PF00072 Response regulator receiver domain At15955_37320 PF00884 Sulfatase At15955_37320 PF08019 Phosphoethanolamine transferase EptA/EptB At15955_37340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_37340 PF03466 LysR substrate binding domain At15955_37350 PF07715 TonB-dependent Receptor Plug Domain At15955_37350 PF00593 TonB dependent receptor At15955_37370 PF01032 FecCD transport family At15955_37380 PF00005 ABC transporter At15955_37410 PF02631 RecX family At15955_37420 PF08450 SMP-30/Gluconolactonase/LRE-like region At15955_37440 PF02653 Branched-chain amino acid transport system / permease component At15955_37450 PF00005 ABC transporter At15955_37460 PF13407 Periplasmic binding protein domain At15955_37470 PF07730 Histidine kinase At15955_37470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_37480 PF00196 Bacterial regulatory proteins, luxR family At15955_37480 PF00072 Response regulator receiver domain At15955_37500 PF07995 Glucose / Sorbosone dehydrogenase At15955_37520 PF04445 Putative SAM-dependent methyltransferase At15955_37530 PF00849 RNA pseudouridylate synthase At15955_37540 PF01205 Uncharacterized protein family UPF0029 At15955_37550 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_37550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_37560 PF00571 CBS domain At15955_37560 PF00005 ABC transporter At15955_37570 PF00528 Binding-protein-dependent transport system inner membrane component At15955_37590 PF13426 PAS domain At15955_37590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_37590 PF00072 Response regulator receiver domain At15955_37600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_37610 PF13807 G-rich domain on putative tyrosine kinase At15955_37610 PF02706 Chain length determinant protein At15955_37610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At15955_37620 PF00483 Nucleotidyl transferase At15955_37630 PF00535 Glycosyl transferase family 2 At15955_37640 PF00535 Glycosyl transferase family 2 At15955_37650 PF00535 Glycosyl transferase family 2 At15955_37670 PF00722 Glycosyl hydrolases family 16 At15955_37680 PF01757 Acyltransferase family At15955_37690 PF01943 Polysaccharide biosynthesis protein At15955_37700 PF00535 Glycosyl transferase family 2 At15955_37710 PF04230 Polysaccharide pyruvyl transferase At15955_37720 PF00535 Glycosyl transferase family 2 At15955_37730 PF11089 Exopolysaccharide production repressor At15955_37760 PF01165 Ribosomal protein S21 At15955_37770 PF01266 FAD dependent oxidoreductase At15955_37800 PF08669 Glycine cleavage T-protein C-terminal barrel domain At15955_37800 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_37800 PF17806 Sarcosine oxidase A3 domain At15955_37800 PF01571 Aminomethyltransferase folate-binding domain At15955_37840 PF01575 MaoC like domain At15955_37850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At15955_37850 PF18390 Glycogen debranching enzyme C-terminal domain At15955_37850 PF00128 Alpha amylase, catalytic domain At15955_37860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At15955_37860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At15955_37860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At15955_37860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At15955_37870 PF08323 Starch synthase catalytic domain At15955_37870 PF00534 Glycosyl transferases group 1 At15955_37880 PF00483 Nucleotidyl transferase At15955_37890 PF00128 Alpha amylase, catalytic domain At15955_37890 PF02806 Alpha amylase, C-terminal all-beta domain At15955_37890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At15955_37900 PF00343 Carbohydrate phosphorylase At15955_37920 PF01177 Asp/Glu/Hydantoin racemase At15955_37930 PF01037 Lrp/AsnC ligand binding domain At15955_37950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At15955_37950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At15955_37970 PF08240 Alcohol dehydrogenase GroES-like domain At15955_37970 PF00107 Zinc-binding dehydrogenase At15955_37990 PF00005 ABC transporter At15955_37990 PF00664 ABC transporter transmembrane region At15955_38000 PF00005 ABC transporter At15955_38000 PF00664 ABC transporter transmembrane region At15955_38010 PF01654 Cytochrome bd terminal oxidase subunit I At15955_38020 PF02322 Cytochrome bd terminal oxidase subunit II At15955_38030 PF08173 Membrane bound YbgT-like protein At15955_38070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain At15955_38070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain At15955_38080 PF02910 Fumarate reductase flavoprotein C-term At15955_38080 PF00890 FAD binding domain At15955_38090 PF02445 Quinolinate synthetase A protein At15955_38140 PF02224 Cytidylate kinase At15955_38150 PF00575 S1 RNA binding domain At15955_38210 PF00106 short chain dehydrogenase At15955_38220 PF01321 Creatinase/Prolidase N-terminal domain At15955_38220 PF00557 Metallopeptidase family M24 At15955_38230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_38240 PF00528 Binding-protein-dependent transport system inner membrane component At15955_38250 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_38250 PF00528 Binding-protein-dependent transport system inner membrane component At15955_38260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_38260 PF00005 ABC transporter At15955_38270 PF00005 ABC transporter At15955_38270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_38280 PF07729 FCD domain At15955_38280 PF00392 Bacterial regulatory proteins, gntR family At15955_38290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_38290 PF13378 Enolase C-terminal domain-like At15955_38300 PF00296 Luciferase-like monooxygenase At15955_38330 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_38330 PF00005 ABC transporter At15955_38340 PF00005 ABC transporter At15955_38350 PF02653 Branched-chain amino acid transport system / permease component At15955_38360 PF02653 Branched-chain amino acid transport system / permease component At15955_38360 PF11862 Domain of unknown function (DUF3382) At15955_38370 PF05199 GMC oxidoreductase At15955_38370 PF00732 GMC oxidoreductase At15955_38380 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At15955_38380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At15955_38390 PF00501 AMP-binding enzyme At15955_38390 PF13193 AMP-binding enzyme C-terminal domain At15955_38440 PF01011 PQQ enzyme repeat At15955_38450 PF05974 Domain of unknown function (DUF892) At15955_38470 PF01965 DJ-1/PfpI family At15955_38520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At15955_38520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At15955_38530 PF16363 GDP-mannose 4,6 dehydratase At15955_38540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At15955_38540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At15955_38540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At15955_38560 PF13409 Glutathione S-transferase, N-terminal domain At15955_38570 PF03466 LysR substrate binding domain At15955_38570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_38580 PF00171 Aldehyde dehydrogenase family At15955_38590 PF09084 NMT1/THI5 like At15955_38600 PF00528 Binding-protein-dependent transport system inner membrane component At15955_38610 PF00005 ABC transporter At15955_38620 PF00171 Aldehyde dehydrogenase family At15955_38620 PF01619 Proline dehydrogenase At15955_38620 PF14850 DNA-binding domain of Proline dehydrogenase At15955_38620 PF18327 Proline utilization A proline dehydrogenase N-terminal domain At15955_38630 PF01037 Lrp/AsnC ligand binding domain At15955_38640 PF08281 Sigma-70, region 4 At15955_38640 PF04542 Sigma-70 region 2 At15955_38660 PF00072 Response regulator receiver domain At15955_38670 PF07536 HWE histidine kinase At15955_38670 PF08447 PAS fold At15955_38670 PF13426 PAS domain At15955_38680 PF13426 PAS domain At15955_38680 PF07536 HWE histidine kinase At15955_38700 PF16363 GDP-mannose 4,6 dehydratase At15955_38730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At15955_38740 PF16653 Saccharopine dehydrogenase C-terminal domain At15955_38740 PF03435 Saccharopine dehydrogenase NADP binding domain At15955_38750 PF00270 DEAD/DEAH box helicase At15955_38750 PF00271 Helicase conserved C-terminal domain At15955_38760 PF13840 ACT domain At15955_38760 PF00696 Amino acid kinase family At15955_38760 PF01842 ACT domain At15955_38770 PF02896 PEP-utilising enzyme, TIM barrel domain At15955_38770 PF05524 PEP-utilising enzyme, N-terminal At15955_38770 PF00391 PEP-utilising enzyme, mobile domain At15955_38770 PF01590 GAF domain At15955_38780 PF03462 PCRF domain At15955_38780 PF00472 RF-1 domain At15955_38790 PF05175 Methyltransferase small domain At15955_38790 PF17827 PrmC N-terminal domain At15955_38810 PF10431 C-terminal, D2-small domain, of ClpB protein At15955_38810 PF00004 ATPase family associated with various cellular activities (AAA) At15955_38810 PF07724 AAA domain (Cdc48 subfamily) At15955_38810 PF02861 Clp amino terminal domain, pathogenicity island component At15955_38810 PF17871 AAA lid domain At15955_38820 PF10145 Phage-related minor tail protein At15955_38820 PF01551 Peptidase family M23 At15955_38820 PF01464 Transglycosylase SLT domain At15955_38840 PF12327 FtsZ family, C-terminal domain At15955_38840 PF00091 Tubulin/FtsZ family, GTPase domain At15955_38850 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_38850 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_38880 PF00873 AcrB/AcrD/AcrF family At15955_38900 PF00440 Bacterial regulatory proteins, tetR family At15955_38910 PF00106 short chain dehydrogenase At15955_38920 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_38930 PF00106 short chain dehydrogenase At15955_38940 PF08240 Alcohol dehydrogenase GroES-like domain At15955_38940 PF00107 Zinc-binding dehydrogenase At15955_38960 PF00384 Molybdopterin oxidoreductase At15955_38970 PF07690 Major Facilitator Superfamily At15955_38980 PF01494 FAD binding domain At15955_38990 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_39010 PF00072 Response regulator receiver domain At15955_39010 PF00196 Bacterial regulatory proteins, luxR family At15955_39020 PF00196 Bacterial regulatory proteins, luxR family At15955_39020 PF00072 Response regulator receiver domain At15955_39030 PF13426 PAS domain At15955_39030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_39030 PF00072 Response regulator receiver domain At15955_39030 PF00512 His Kinase A (phospho-acceptor) domain At15955_39030 PF08448 PAS fold At15955_39040 PF00190 Cupin At15955_39050 PF00210 Ferritin-like domain At15955_39060 PF00561 alpha/beta hydrolase fold At15955_39070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_39070 PF03466 LysR substrate binding domain At15955_39100 PF01047 MarR family At15955_39120 PF00561 alpha/beta hydrolase fold At15955_39130 PF04752 ChaC-like protein At15955_39140 PF03466 LysR substrate binding domain At15955_39140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_39150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_39160 PF03466 LysR substrate binding domain At15955_39160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_39190 PF07969 Amidohydrolase family At15955_39230 PF00111 2Fe-2S iron-sulfur cluster binding domain At15955_39230 PF01799 [2Fe-2S] binding domain At15955_39230 PF10518 TAT (twin-arginine translocation) pathway signal sequence At15955_39240 PF03450 CO dehydrogenase flavoprotein C-terminal domain At15955_39240 PF00941 FAD binding domain in molybdopterin dehydrogenase At15955_39250 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At15955_39250 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At15955_39260 PF02625 XdhC and CoxI family At15955_39260 PF13478 XdhC Rossmann domain At15955_39270 PF00132 Bacterial transferase hexapeptide (six repeats) At15955_39270 PF12804 MobA-like NTP transferase domain At15955_39290 PF01965 DJ-1/PfpI family At15955_39300 PF03707 Bacterial signalling protein N terminal repeat At15955_39300 PF00563 EAL domain At15955_39300 PF00990 Diguanylate cyclase, GGDEF domain At15955_39310 PF00313 'Cold-shock' DNA-binding domain At15955_39320 PF00005 ABC transporter At15955_39320 PF00571 CBS domain At15955_39330 PF00528 Binding-protein-dependent transport system inner membrane component At15955_39360 PF07702 UTRA domain At15955_39360 PF00392 Bacterial regulatory proteins, gntR family At15955_39370 PF00221 Aromatic amino acid lyase At15955_39410 PF00005 ABC transporter At15955_39410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_39420 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_39420 PF00528 Binding-protein-dependent transport system inner membrane component At15955_39430 PF00528 Binding-protein-dependent transport system inner membrane component At15955_39440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_39460 PF02203 Tar ligand binding domain homologue At15955_39460 PF00672 HAMP domain At15955_39460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_39480 PF13188 PAS domain At15955_39480 PF00990 Diguanylate cyclase, GGDEF domain At15955_39480 PF03707 Bacterial signalling protein N terminal repeat At15955_39480 PF00563 EAL domain At15955_39530 PF00356 Bacterial regulatory proteins, lacI family At15955_39550 PF00005 ABC transporter At15955_39560 PF02653 Branched-chain amino acid transport system / permease component At15955_39570 PF02126 Phosphotriesterase family At15955_39590 PF00294 pfkB family carbohydrate kinase At15955_39600 PF07687 Peptidase dimerisation domain At15955_39600 PF01546 Peptidase family M20/M25/M40 At15955_39610 PF02469 Fasciclin domain At15955_39620 PF00330 Aconitase family (aconitate hydratase) At15955_39620 PF11791 Aconitate B N-terminal domain At15955_39620 PF06434 Aconitate hydratase 2 N-terminus At15955_39640 PF00733 Asparagine synthase At15955_39640 PF13537 Glutamine amidotransferase domain At15955_39660 PF13193 AMP-binding enzyme C-terminal domain At15955_39660 PF00501 AMP-binding enzyme At15955_39670 PF02540 NAD synthase At15955_39710 PF17806 Sarcosine oxidase A3 domain At15955_39710 PF01571 Aminomethyltransferase folate-binding domain At15955_39710 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_39710 PF08669 Glycine cleavage T-protein C-terminal barrel domain At15955_39720 PF04267 Sarcosine oxidase, delta subunit family At15955_39730 PF01266 FAD dependent oxidoreductase At15955_39740 PF01965 DJ-1/PfpI family At15955_39740 PF12833 Helix-turn-helix domain At15955_39750 PF00005 ABC transporter At15955_39760 PF02653 Branched-chain amino acid transport system / permease component At15955_39770 PF02653 Branched-chain amino acid transport system / permease component At15955_39790 PF07729 FCD domain At15955_39790 PF00392 Bacterial regulatory proteins, gntR family At15955_39810 PF08125 Mannitol dehydrogenase C-terminal domain At15955_39810 PF01232 Mannitol dehydrogenase Rossmann domain At15955_39820 PF03786 D-mannonate dehydratase (UxuA) At15955_39830 PF00248 Aldo/keto reductase family At15955_39860 PF00440 Bacterial regulatory proteins, tetR family At15955_39870 PF00107 Zinc-binding dehydrogenase At15955_39870 PF08240 Alcohol dehydrogenase GroES-like domain At15955_39880 PF12833 Helix-turn-helix domain At15955_39890 PF13407 Periplasmic binding protein domain At15955_39900 PF00005 ABC transporter At15955_39910 PF02653 Branched-chain amino acid transport system / permease component At15955_39920 PF00106 short chain dehydrogenase At15955_39930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_39930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_39950 PF08946 Osmosensory transporter coiled coil At15955_39950 PF00083 Sugar (and other) transporter At15955_39970 PF00459 Inositol monophosphatase family At15955_40000 PF02690 Na+/Pi-cotransporter At15955_40010 PF00356 Bacterial regulatory proteins, lacI family At15955_40020 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40030 PF08402 TOBE domain At15955_40030 PF00005 ABC transporter At15955_40070 PF00459 Inositol monophosphatase family At15955_40090 PF03471 Transporter associated domain At15955_40090 PF03741 Integral membrane protein TerC family At15955_40120 PF17912 MalK OB fold domain At15955_40120 PF03459 TOBE domain At15955_40120 PF00005 ABC transporter At15955_40130 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40140 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40150 PF13416 Bacterial extracellular solute-binding protein At15955_40160 PF01261 Xylose isomerase-like TIM barrel At15955_40170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_40170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_40180 PF00356 Bacterial regulatory proteins, lacI family At15955_40210 PF01266 FAD dependent oxidoreductase At15955_40230 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_40230 PF01571 Aminomethyltransferase folate-binding domain At15955_40230 PF17806 Sarcosine oxidase A3 domain At15955_40230 PF08669 Glycine cleavage T-protein C-terminal barrel domain At15955_40250 PF00464 Serine hydroxymethyltransferase At15955_40260 PF00551 Formyl transferase At15955_40270 PF00924 Mechanosensitive ion channel At15955_40290 PF01740 STAS domain At15955_40290 PF00916 Sulfate permease family At15955_40320 PF01648 4'-phosphopantetheinyl transferase superfamily At15955_40320 PF17837 4'-phosphopantetheinyl transferase N-terminal domain At15955_40340 PF00857 Isochorismatase family At15955_40340 PF00550 Phosphopantetheine attachment site At15955_40350 PF13193 AMP-binding enzyme C-terminal domain At15955_40350 PF00501 AMP-binding enzyme At15955_40360 PF00425 chorismate binding enzyme At15955_40370 PF00501 AMP-binding enzyme At15955_40370 PF00550 Phosphopantetheine attachment site At15955_40370 PF13193 AMP-binding enzyme C-terminal domain At15955_40370 PF00668 Condensation domain At15955_40380 PF00668 Condensation domain At15955_40380 PF00501 AMP-binding enzyme At15955_40380 PF00550 Phosphopantetheine attachment site At15955_40380 PF00975 Thioesterase domain At15955_40390 PF00501 AMP-binding enzyme At15955_40390 PF13193 AMP-binding enzyme C-terminal domain At15955_40390 PF00668 Condensation domain At15955_40390 PF00975 Thioesterase domain At15955_40390 PF00550 Phosphopantetheine attachment site At15955_40410 PF08021 Siderophore-interacting FAD-binding domain At15955_40410 PF04954 Siderophore-interacting protein At15955_40430 PF01032 FecCD transport family At15955_40440 PF01032 FecCD transport family At15955_40450 PF00005 ABC transporter At15955_40460 PF00296 Luciferase-like monooxygenase At15955_40480 PF07715 TonB-dependent Receptor Plug Domain At15955_40490 PF02770 Acyl-CoA dehydrogenase, middle domain At15955_40490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_40490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At15955_40500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_40500 PF03466 LysR substrate binding domain At15955_40510 PF00356 Bacterial regulatory proteins, lacI family At15955_40530 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40550 PF08402 TOBE domain At15955_40550 PF00005 ABC transporter At15955_40570 PF01979 Amidohydrolase family At15955_40570 PF13382 Adenine deaminase C-terminal domain At15955_40580 PF03466 LysR substrate binding domain At15955_40580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_40590 PF07690 Major Facilitator Superfamily At15955_40600 PF01546 Peptidase family M20/M25/M40 At15955_40600 PF07687 Peptidase dimerisation domain At15955_40620 PF01244 Membrane dipeptidase (Peptidase family M19) At15955_40630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_40640 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40660 PF00005 ABC transporter At15955_40660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_40670 PF00005 ABC transporter At15955_40670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_40680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_40680 PF03466 LysR substrate binding domain At15955_40690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_40700 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40710 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40710 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_40720 PF01425 Amidase At15955_40730 PF01965 DJ-1/PfpI family At15955_40750 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_40750 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40760 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_40780 PF07687 Peptidase dimerisation domain At15955_40780 PF01546 Peptidase family M20/M25/M40 At15955_40790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_40790 PF00005 ABC transporter At15955_40800 PF04198 Putative sugar-binding domain At15955_40820 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40830 PF00528 Binding-protein-dependent transport system inner membrane component At15955_40840 PF00005 ABC transporter At15955_40840 PF08402 TOBE domain At15955_40850 PF08125 Mannitol dehydrogenase C-terminal domain At15955_40850 PF01232 Mannitol dehydrogenase Rossmann domain At15955_40860 PF13419 Haloacid dehalogenase-like hydrolase At15955_40870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_40870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_40880 PF01418 Helix-turn-helix domain, rpiR family At15955_40880 PF01380 SIS domain At15955_40900 PF10576 Iron-sulfur binding domain of endonuclease III At15955_40900 PF00730 HhH-GPD superfamily base excision DNA repair protein At15955_40900 PF00633 Helix-hairpin-helix motif At15955_40920 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At15955_40920 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At15955_40930 PF13936 Helix-turn-helix domain At15955_40930 PF04198 Putative sugar-binding domain At15955_40940 PF00923 Transaldolase/Fructose-6-phosphate aldolase At15955_40950 PF01614 Bacterial transcriptional regulator At15955_40950 PF09339 IclR helix-turn-helix domain At15955_40970 PF07043 Protein of unknown function (DUF1328) At15955_40980 PF00950 ABC 3 transport family At15955_40990 PF00950 ABC 3 transport family At15955_41000 PF00005 ABC transporter At15955_41010 PF01297 Zinc-uptake complex component A periplasmic At15955_41030 PF01336 OB-fold nucleic acid binding domain At15955_41030 PF00152 tRNA synthetases class II (D, K and N) At15955_41040 PF00749 tRNA synthetases class I (E and Q), catalytic domain At15955_41050 PF03600 Citrate transporter At15955_41050 PF02080 TrkA-C domain At15955_41060 PF03471 Transporter associated domain At15955_41060 PF03741 Integral membrane protein TerC family At15955_41070 PF00440 Bacterial regulatory proteins, tetR family At15955_41080 PF13533 Biotin-lipoyl like At15955_41090 PF07690 Major Facilitator Superfamily At15955_41100 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At15955_41100 PF00356 Bacterial regulatory proteins, lacI family At15955_41110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_41110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_41120 PF01261 Xylose isomerase-like TIM barrel At15955_41130 PF00232 Glycosyl hydrolase family 1 At15955_41140 PF00881 Nitroreductase family At15955_41150 PF00005 ABC transporter At15955_41150 PF09383 NIL domain At15955_41160 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41170 PF03180 NLPA lipoprotein At15955_41180 PF00563 EAL domain At15955_41180 PF13188 PAS domain At15955_41180 PF03707 Bacterial signalling protein N terminal repeat At15955_41180 PF00990 Diguanylate cyclase, GGDEF domain At15955_41220 PF01081 KDPG and KHG aldolase At15955_41260 PF03824 High-affinity nickel-transport protein At15955_41300 PF13505 Outer membrane protein beta-barrel domain At15955_41330 PF07683 Cobalamin synthesis protein cobW C-terminal domain At15955_41330 PF02492 CobW/HypB/UreG, nucleotide-binding domain At15955_41340 PF02633 Creatinine amidohydrolase At15955_41350 PF01047 MarR family At15955_41360 PF00356 Bacterial regulatory proteins, lacI family At15955_41380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_41380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At15955_41390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_41390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_41400 PF04962 KduI/IolB family At15955_41410 PF01261 Xylose isomerase-like TIM barrel At15955_41420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At15955_41420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At15955_41420 PF00205 Thiamine pyrophosphate enzyme, central domain At15955_41430 PF00294 pfkB family carbohydrate kinase At15955_41450 PF00005 ABC transporter At15955_41450 PF08402 TOBE domain At15955_41460 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_41460 PF00005 ABC transporter At15955_41490 PF13458 Periplasmic binding protein At15955_41520 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_41520 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41530 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_41550 PF00005 ABC transporter At15955_41550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_41580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At15955_41600 PF01220 Dehydroquinase class II At15955_41610 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At15955_41610 PF08501 Shikimate dehydrogenase substrate binding domain At15955_41620 PF00005 ABC transporter At15955_41630 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_41640 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_41650 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41660 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41670 PF10397 Adenylosuccinate lyase C-terminus At15955_41670 PF00206 Lyase At15955_41680 PF00775 Dioxygenase At15955_41690 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal At15955_41690 PF00775 Dioxygenase At15955_41700 PF02627 Carboxymuconolactone decarboxylase family At15955_41720 PF03466 LysR substrate binding domain At15955_41720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_41730 PF01494 FAD binding domain At15955_41750 PF09339 IclR helix-turn-helix domain At15955_41750 PF01614 Bacterial transcriptional regulator At15955_41760 PF01144 Coenzyme A transferase At15955_41770 PF01144 Coenzyme A transferase At15955_41780 PF02803 Thiolase, C-terminal domain At15955_41780 PF00108 Thiolase, N-terminal domain At15955_41790 PF00356 Bacterial regulatory proteins, lacI family At15955_41800 PF13407 Periplasmic binding protein domain At15955_41810 PF01261 Xylose isomerase-like TIM barrel At15955_41820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_41820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_41840 PF00356 Bacterial regulatory proteins, lacI family At15955_41850 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41860 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41870 PF17912 MalK OB fold domain At15955_41870 PF00005 ABC transporter At15955_41890 PF07470 Glycosyl Hydrolase Family 88 At15955_41930 PF00480 ROK family At15955_41950 PF00005 ABC transporter At15955_41950 PF17912 MalK OB fold domain At15955_41960 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41970 PF00528 Binding-protein-dependent transport system inner membrane component At15955_41980 PF03009 Glycerophosphoryl diester phosphodiesterase family At15955_41990 PF00459 Inositol monophosphatase family At15955_42000 PF00480 ROK family At15955_42010 PF01547 Bacterial extracellular solute-binding protein At15955_42020 PF08402 TOBE domain At15955_42020 PF00005 ABC transporter At15955_42030 PF00528 Binding-protein-dependent transport system inner membrane component At15955_42060 PF11953 Domain of unknown function (DUF3470) At15955_42060 PF00037 4Fe-4S binding domain At15955_42070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At15955_42070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At15955_42120 PF08479 POTRA domain, ShlB-type At15955_42120 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB At15955_42120 PF17287 POTRA domain At15955_42140 PF04829 Pre-toxin domain with VENN motif At15955_42140 PF13332 Hemagglutinin repeat At15955_42140 PF15526 Novel toxin 21 At15955_42140 PF05860 haemagglutination activity domain At15955_42140 PF13332 Hemagglutinin repeat At15955_42140 PF05594 Haemagluttinin repeat At15955_42140 PF05860 haemagglutination activity domain At15955_42140 PF15526 Novel toxin 21 At15955_42140 PF05594 Haemagluttinin repeat At15955_42140 PF04829 Pre-toxin domain with VENN motif At15955_42180 PF13276 HTH-like domain At15955_42180 PF13683 Integrase core domain At15955_42190 PF01527 Transposase At15955_42200 PF13007 Transposase C of IS166 homeodomain At15955_42200 PF03050 Transposase IS66 family At15955_42200 PF13005 zinc-finger binding domain of transposase IS66 At15955_42200 PF13817 IS66 C-terminal element At15955_42250 PF01758 Sodium Bile acid symporter family At15955_42280 PF00005 ABC transporter At15955_42280 PF00664 ABC transporter transmembrane region At15955_42300 PF05045 Rhamnan synthesis protein F At15955_42310 PF00535 Glycosyl transferase family 2 At15955_42340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family At15955_42350 PF05523 WxcM-like, C-terminal At15955_42400 PF16363 GDP-mannose 4,6 dehydratase At15955_42420 PF00795 Carbon-nitrogen hydrolase At15955_42420 PF00535 Glycosyl transferase family 2 At15955_42430 PF00483 Nucleotidyl transferase At15955_42440 PF04321 RmlD substrate binding domain At15955_42450 PF16363 GDP-mannose 4,6 dehydratase At15955_42460 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At15955_42480 PF01497 Periplasmic binding protein At15955_42490 PF01032 FecCD transport family At15955_42500 PF01032 FecCD transport family At15955_42510 PF00005 ABC transporter At15955_42520 PF07715 TonB-dependent Receptor Plug Domain At15955_42530 PF00817 impB/mucB/samB family At15955_42530 PF11799 impB/mucB/samB family C-terminal domain At15955_42540 PF00580 UvrD/REP helicase N-terminal domain At15955_42540 PF13361 UvrD-like helicase C-terminal domain At15955_42560 PF00356 Bacterial regulatory proteins, lacI family At15955_42570 PF01593 Flavin containing amine oxidoreductase At15955_42590 PF00528 Binding-protein-dependent transport system inner membrane component At15955_42600 PF00528 Binding-protein-dependent transport system inner membrane component At15955_42610 PF03459 TOBE domain At15955_42610 PF00005 ABC transporter At15955_42610 PF17912 MalK OB fold domain At15955_42620 PF00005 ABC transporter At15955_42620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_42630 PF00005 ABC transporter At15955_42630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_42640 PF00528 Binding-protein-dependent transport system inner membrane component At15955_42640 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_42650 PF00528 Binding-protein-dependent transport system inner membrane component At15955_42660 PF07729 FCD domain At15955_42660 PF00392 Bacterial regulatory proteins, gntR family At15955_42670 PF03786 D-mannonate dehydratase (UxuA) At15955_42680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_42710 PF13188 PAS domain At15955_42710 PF03707 Bacterial signalling protein N terminal repeat At15955_42710 PF00990 Diguanylate cyclase, GGDEF domain At15955_42710 PF00563 EAL domain At15955_42740 PF02735 Ku70/Ku80 beta-barrel domain At15955_42750 PF04679 ATP dependent DNA ligase C terminal region At15955_42750 PF13298 DNA polymerase Ligase (LigD) At15955_42750 PF01068 ATP dependent DNA ligase domain At15955_42760 PF02735 Ku70/Ku80 beta-barrel domain At15955_42770 PF01384 Phosphate transporter family At15955_42780 PF01865 Protein of unknown function DUF47 At15955_42800 PF17843 MycE methyltransferase N-terminal At15955_42820 PF00873 AcrB/AcrD/AcrF family At15955_42830 PF13533 Biotin-lipoyl like At15955_42840 PF00072 Response regulator receiver domain At15955_42840 PF00486 Transcriptional regulatory protein, C terminal At15955_42850 PF00672 HAMP domain At15955_42850 PF00512 His Kinase A (phospho-acceptor) domain At15955_42850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_42870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_42870 PF03466 LysR substrate binding domain At15955_42880 PF00141 Peroxidase At15955_42900 PF02311 AraC-like ligand binding domain At15955_42900 PF12833 Helix-turn-helix domain At15955_42910 PF07715 TonB-dependent Receptor Plug Domain At15955_42910 PF00593 TonB dependent receptor At15955_42930 PF01032 FecCD transport family At15955_42940 PF01032 FecCD transport family At15955_42950 PF00005 ABC transporter At15955_42960 PF01638 HxlR-like helix-turn-helix At15955_42990 PF10114 Sensory domain found in PocR At15955_42990 PF12833 Helix-turn-helix domain At15955_43010 PF00171 Aldehyde dehydrogenase family At15955_43020 PF03466 LysR substrate binding domain At15955_43020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_43030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At15955_43040 PF00884 Sulfatase At15955_43040 PF12411 Choline sulfatase enzyme C terminal At15955_43050 PF00294 pfkB family carbohydrate kinase At15955_43060 PF03459 TOBE domain At15955_43060 PF00005 ABC transporter At15955_43060 PF17912 MalK OB fold domain At15955_43070 PF00206 Lyase At15955_43070 PF14698 Argininosuccinate lyase C-terminal At15955_43080 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43100 PF13416 Bacterial extracellular solute-binding protein At15955_43110 PF00480 ROK family At15955_43160 PF11975 Family 4 glycosyl hydrolase C-terminal domain At15955_43160 PF02056 Family 4 glycosyl hydrolase At15955_43170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_43180 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43190 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43190 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_43200 PF00005 ABC transporter At15955_43200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_43210 PF11975 Family 4 glycosyl hydrolase C-terminal domain At15955_43210 PF02056 Family 4 glycosyl hydrolase At15955_43220 PF13533 Biotin-lipoyl like At15955_43230 PF00005 ABC transporter At15955_43270 PF00072 Response regulator receiver domain At15955_43280 PF00091 Tubulin/FtsZ family, GTPase domain At15955_43280 PF12327 FtsZ family, C-terminal domain At15955_43290 PF00392 Bacterial regulatory proteins, gntR family At15955_43290 PF07729 FCD domain At15955_43300 PF00701 Dihydrodipicolinate synthetase family At15955_43310 PF02615 Malate/L-lactate dehydrogenase At15955_43330 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43340 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43350 PF00005 ABC transporter At15955_43360 PF01266 FAD dependent oxidoreductase At15955_43380 PF05544 Proline racemase At15955_43390 PF00356 Bacterial regulatory proteins, lacI family At15955_43420 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_43440 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43450 PF00005 ABC transporter At15955_43460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At15955_43460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At15955_43470 PF00990 Diguanylate cyclase, GGDEF domain At15955_43470 PF03707 Bacterial signalling protein N terminal repeat At15955_43470 PF00563 EAL domain At15955_43480 PF02530 Porin subfamily At15955_43490 PF01979 Amidohydrolase family At15955_43500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_43520 PF00528 Binding-protein-dependent transport system inner membrane component At15955_43520 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_43530 PF01979 Amidohydrolase family At15955_43540 PF01979 Amidohydrolase family At15955_43550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_43550 PF00005 ABC transporter At15955_43560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_43560 PF00005 ABC transporter At15955_43570 PF00392 Bacterial regulatory proteins, gntR family At15955_43570 PF07729 FCD domain At15955_43580 PF01613 Flavin reductase like domain At15955_43590 PF01177 Asp/Glu/Hydantoin racemase At15955_43600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_43600 PF03466 LysR substrate binding domain At15955_43620 PF00037 4Fe-4S binding domain At15955_43620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At15955_43620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At15955_43630 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At15955_43630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At15955_43630 PF01568 Molydopterin dinucleotide binding domain At15955_43630 PF12838 4Fe-4S dicluster domain At15955_43630 PF00384 Molybdopterin oxidoreductase At15955_43650 PF07690 Major Facilitator Superfamily At15955_43660 PF13673 Acetyltransferase (GNAT) domain At15955_43670 PF00072 Response regulator receiver domain At15955_43670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_43670 PF00512 His Kinase A (phospho-acceptor) domain At15955_43670 PF08448 PAS fold At15955_43670 PF13426 PAS domain At15955_43680 PF00486 Transcriptional regulatory protein, C terminal At15955_43680 PF00072 Response regulator receiver domain At15955_43720 PF05532 CsbD-like At15955_43730 PF00072 Response regulator receiver domain At15955_43730 PF00196 Bacterial regulatory proteins, luxR family At15955_43740 PF03401 Tripartite tricarboxylate transporter family receptor At15955_43750 PF00005 ABC transporter At15955_43750 PF00664 ABC transporter transmembrane region At15955_43780 PF12792 CSS motif domain associated with EAL At15955_43780 PF00563 EAL domain At15955_43800 PF00199 Catalase At15955_43800 PF06628 Catalase-related immune-responsive At15955_43800 PF18011 C-terminal domain found in long catalases At15955_43910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_43910 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_43940 PF00990 Diguanylate cyclase, GGDEF domain At15955_43940 PF01590 GAF domain At15955_43940 PF00360 Phytochrome region At15955_43940 PF00563 EAL domain At15955_43960 PF13302 Acetyltransferase (GNAT) domain At15955_43970 PF04244 Deoxyribodipyrimidine photo-lyase-related protein At15955_44060 PF08281 Sigma-70, region 4 At15955_44060 PF04542 Sigma-70 region 2 At15955_44090 PF00440 Bacterial regulatory proteins, tetR family At15955_44120 PF00669 Bacterial flagellin N-terminal helical region At15955_44120 PF00700 Bacterial flagellin C-terminal helical region At15955_44160 PF00005 ABC transporter At15955_44170 PF00528 Binding-protein-dependent transport system inner membrane component At15955_44180 PF00528 Binding-protein-dependent transport system inner membrane component At15955_44190 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_44200 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family At15955_44210 PF01321 Creatinase/Prolidase N-terminal domain At15955_44210 PF00557 Metallopeptidase family M24 At15955_44220 PF02423 Ornithine cyclodeaminase/mu-crystallin family At15955_44230 PF00291 Pyridoxal-phosphate dependent enzyme At15955_44240 PF00155 Aminotransferase class I and II At15955_44240 PF00392 Bacterial regulatory proteins, gntR family At15955_44250 PF00202 Aminotransferase class-III At15955_44260 PF00171 Aldehyde dehydrogenase family At15955_44270 PF01037 Lrp/AsnC ligand binding domain At15955_44280 PF02563 Polysaccharide biosynthesis/export protein At15955_44320 PF00691 OmpA family At15955_44430 PF07724 AAA domain (Cdc48 subfamily) At15955_44430 PF17871 AAA lid domain At15955_44430 PF10431 C-terminal, D2-small domain, of ClpB protein At15955_44430 PF00004 ATPase family associated with various cellular activities (AAA) At15955_44470 PF04717 Type VI secretion system, phage-baseplate injector At15955_44610 PF02308 MgtC family At15955_44620 PF17841 BID domain of Bartonella effector protein (Bep) At15955_44620 PF03389 MobA/MobL family At15955_44620 PF01443 Viral (Superfamily 1) RNA helicase At15955_44660 PF13649 Methyltransferase domain At15955_44690 PF00144 Beta-lactamase At15955_44710 PF03466 LysR substrate binding domain At15955_44710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_44740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_44750 PF00528 Binding-protein-dependent transport system inner membrane component At15955_44770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_44770 PF00005 ABC transporter At15955_44800 PF03737 Aldolase/RraA At15955_44840 PF07729 FCD domain At15955_44840 PF00392 Bacterial regulatory proteins, gntR family At15955_44920 PF01965 DJ-1/PfpI family At15955_44930 PF01443 Viral (Superfamily 1) RNA helicase At15955_44930 PF17841 BID domain of Bartonella effector protein (Bep) At15955_44930 PF03389 MobA/MobL family At15955_44950 PF00300 Histidine phosphatase superfamily (branch 1) At15955_45130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_45130 PF03466 LysR substrate binding domain At15955_45160 PF05973 Phage derived protein Gp49-like (DUF891) At15955_45200 PF13614 AAA domain At15955_45200 PF00376 MerR family regulatory protein At15955_45210 PF07506 RepB plasmid partitioning protein At15955_45210 PF02195 ParB-like nuclease domain At15955_45220 PF03428 Replication protein C N-terminal domain At15955_45220 PF11800 Replication protein C C-terminal region At15955_45240 PF01850 PIN domain At15955_45250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin At15955_45270 PF03328 HpcH/HpaI aldolase/citrate lyase family At15955_45280 PF01557 Fumarylacetoacetate (FAA) hydrolase family At15955_45290 PF00775 Dioxygenase At15955_45290 PF04444 Catechol dioxygenase N terminus At15955_45360 PF11972 HTH DNA binding domain At15955_45360 PF07756 Protein of unknown function (DUF1612) At15955_45490 PF09386 Antitoxin ParD At15955_45520 PF01381 Helix-turn-helix At15955_45530 PF07804 HipA-like C-terminal domain At15955_45530 PF13657 HipA N-terminal domain At15955_45540 PF01638 HxlR-like helix-turn-helix At15955_45620 PF00586 AIR synthase related protein, N-terminal domain At15955_45620 PF02769 AIR synthase related protein, C-terminal domain At15955_45640 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At15955_45640 PF04055 Radical SAM superfamily At15955_45650 PF00795 Carbon-nitrogen hydrolase At15955_45670 PF00155 Aminotransferase class I and II At15955_45670 PF00392 Bacterial regulatory proteins, gntR family At15955_45700 PF00440 Bacterial regulatory proteins, tetR family At15955_45710 PF01177 Asp/Glu/Hydantoin racemase At15955_45730 PF07969 Amidohydrolase family At15955_45770 PF00005 ABC transporter At15955_45800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_45800 PF03466 LysR substrate binding domain At15955_45830 PF12833 Helix-turn-helix domain At15955_45850 PF00106 short chain dehydrogenase At15955_45900 PF00106 short chain dehydrogenase At15955_45910 PF00106 short chain dehydrogenase At15955_45980 PF03358 NADPH-dependent FMN reductase At15955_46000 PF02678 Pirin At15955_46000 PF05726 Pirin C-terminal cupin domain At15955_46010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_46010 PF03466 LysR substrate binding domain At15955_46040 PF01494 FAD binding domain At15955_46050 PF00440 Bacterial regulatory proteins, tetR family At15955_46050 PF02909 Tetracyclin repressor-like, C-terminal domain At15955_46060 PF03466 LysR substrate binding domain At15955_46060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_46080 PF00596 Class II Aldolase and Adducin N-terminal domain At15955_46090 PF03466 LysR substrate binding domain At15955_46090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_46100 PF00106 short chain dehydrogenase At15955_46160 PF07690 Major Facilitator Superfamily At15955_46170 PF07687 Peptidase dimerisation domain At15955_46170 PF01546 Peptidase family M20/M25/M40 At15955_46180 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase At15955_46180 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain At15955_46200 PF02272 DHHA1 domain At15955_46200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At15955_46200 PF01411 tRNA synthetases class II (A) At15955_46230 PF00248 Aldo/keto reductase family At15955_46250 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family At15955_46320 PF07729 FCD domain At15955_46320 PF00392 Bacterial regulatory proteins, gntR family At15955_46340 PF01820 D-ala D-ala ligase N-terminus At15955_46340 PF07478 D-ala D-ala ligase C-terminus At15955_46370 PF02371 Transposase IS116/IS110/IS902 family At15955_46370 PF01548 Transposase At15955_46380 PF00912 Transglycosylase At15955_46380 PF17092 Penicillin-binding protein OB-like domain At15955_46380 PF00905 Penicillin binding protein transpeptidase domain At15955_46390 PF03717 Penicillin-binding Protein dimerisation domain At15955_46390 PF00905 Penicillin binding protein transpeptidase domain At15955_46410 PF02371 Transposase IS116/IS110/IS902 family At15955_46410 PF01548 Transposase At15955_46420 PF02371 Transposase IS116/IS110/IS902 family At15955_46420 PF01548 Transposase At15955_46440 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At15955_46540 PF02661 Fic/DOC family At15955_46540 PF13784 Fic/DOC family N-terminal At15955_46560 PF01032 FecCD transport family At15955_46580 PF07715 TonB-dependent Receptor Plug Domain At15955_46580 PF00593 TonB dependent receptor At15955_46600 PF04542 Sigma-70 region 2 At15955_46600 PF08281 Sigma-70, region 4 At15955_46610 PF13173 AAA domain At15955_46610 PF13635 Domain of unknown function (DUF4143) At15955_46640 PF03466 LysR substrate binding domain At15955_46640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_46650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_46650 PF03466 LysR substrate binding domain At15955_46660 PF00005 ABC transporter At15955_46660 PF08402 TOBE domain At15955_46680 PF01266 FAD dependent oxidoreductase At15955_46700 PF00528 Binding-protein-dependent transport system inner membrane component At15955_46710 PF00528 Binding-protein-dependent transport system inner membrane component At15955_46720 PF00732 GMC oxidoreductase At15955_46720 PF05199 GMC oxidoreductase At15955_46730 PF00171 Aldehyde dehydrogenase family At15955_46750 PF12852 Cupin At15955_46750 PF12833 Helix-turn-helix domain At15955_46760 PF02566 OsmC-like protein At15955_46790 PF00107 Zinc-binding dehydrogenase At15955_46790 PF08240 Alcohol dehydrogenase GroES-like domain At15955_46830 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At15955_46830 PF00294 pfkB family carbohydrate kinase At15955_46880 PF00149 Calcineurin-like phosphoesterase At15955_46890 PF13416 Bacterial extracellular solute-binding protein At15955_46910 PF00528 Binding-protein-dependent transport system inner membrane component At15955_46920 PF13350 Tyrosine phosphatase family At15955_46930 PF17912 MalK OB fold domain At15955_46930 PF00005 ABC transporter At15955_46960 PF03466 LysR substrate binding domain At15955_46960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_46970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III At15955_46970 PF00034 Cytochrome c At15955_46990 PF00732 GMC oxidoreductase At15955_46990 PF05199 GMC oxidoreductase At15955_47010 PF01047 MarR family At15955_47030 PF00857 Isochorismatase family At15955_47060 PF12833 Helix-turn-helix domain At15955_47060 PF06719 AraC-type transcriptional regulator N-terminus At15955_47070 PF13977 BetI-type transcriptional repressor, C-terminal At15955_47070 PF00440 Bacterial regulatory proteins, tetR family At15955_47080 PF13382 Adenine deaminase C-terminal domain At15955_47080 PF01979 Amidohydrolase family At15955_47090 PF00528 Binding-protein-dependent transport system inner membrane component At15955_47100 PF08402 TOBE domain At15955_47100 PF00005 ABC transporter At15955_47120 PF00528 Binding-protein-dependent transport system inner membrane component At15955_47130 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_47130 PF00005 ABC transporter At15955_47140 PF00005 ABC transporter At15955_47150 PF13458 Periplasmic binding protein At15955_47160 PF02653 Branched-chain amino acid transport system / permease component At15955_47170 PF02653 Branched-chain amino acid transport system / permease component At15955_47170 PF11862 Domain of unknown function (DUF3382) At15955_47190 PF01979 Amidohydrolase family At15955_47200 PF00440 Bacterial regulatory proteins, tetR family At15955_47220 PF00672 HAMP domain At15955_47220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_47230 PF01527 Transposase At15955_47240 PF13276 HTH-like domain At15955_47240 PF00665 Integrase core domain At15955_47250 PF00226 DnaJ domain At15955_47270 PF01850 PIN domain At15955_47280 PF00701 Dihydrodipicolinate synthetase family At15955_47290 PF08450 SMP-30/Gluconolactonase/LRE-like region At15955_47300 PF07729 FCD domain At15955_47300 PF00392 Bacterial regulatory proteins, gntR family At15955_47310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_47320 PF00528 Binding-protein-dependent transport system inner membrane component At15955_47330 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_47330 PF00528 Binding-protein-dependent transport system inner membrane component At15955_47340 PF00005 ABC transporter At15955_47340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_47350 PF13378 Enolase C-terminal domain-like At15955_47350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_47370 PF00440 Bacterial regulatory proteins, tetR family At15955_47400 PF00196 Bacterial regulatory proteins, luxR family At15955_47400 PF00072 Response regulator receiver domain At15955_47420 PF00701 Dihydrodipicolinate synthetase family At15955_47470 PF01544 CorA-like Mg2+ transporter protein At15955_47480 PF00781 Diacylglycerol kinase catalytic domain At15955_47490 PF05661 Protein of unknown function (DUF808) At15955_47500 PF00005 ABC transporter At15955_47530 PF01614 Bacterial transcriptional regulator At15955_47530 PF09339 IclR helix-turn-helix domain At15955_47540 PF00171 Aldehyde dehydrogenase family At15955_47550 PF00465 Iron-containing alcohol dehydrogenase At15955_47560 PF00753 Metallo-beta-lactamase superfamily At15955_47590 PF00583 Acetyltransferase (GNAT) family At15955_47610 PF05717 IS66 Orf2 like protein At15955_47620 PF13005 zinc-finger binding domain of transposase IS66 At15955_47620 PF13007 Transposase C of IS166 homeodomain At15955_47620 PF13817 IS66 C-terminal element At15955_47620 PF03050 Transposase IS66 family At15955_47690 PF01022 Bacterial regulatory protein, arsR family At15955_47730 PF00072 Response regulator receiver domain At15955_47730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_47730 PF13426 PAS domain At15955_47750 PF01548 Transposase At15955_47750 PF02371 Transposase IS116/IS110/IS902 family At15955_47780 PF00005 ABC transporter At15955_47790 PF01032 FecCD transport family At15955_47800 PF01032 FecCD transport family At15955_47810 PF01497 Periplasmic binding protein At15955_47820 PF07715 TonB-dependent Receptor Plug Domain At15955_47850 PF13193 AMP-binding enzyme C-terminal domain At15955_47850 PF00501 AMP-binding enzyme At15955_47850 PF00668 Condensation domain At15955_47850 PF00550 Phosphopantetheine attachment site At15955_47850 PF07993 Male sterility protein At15955_47850 PF00668 Condensation domain At15955_47850 PF13193 AMP-binding enzyme C-terminal domain At15955_47850 PF07993 Male sterility protein At15955_47850 PF00501 AMP-binding enzyme At15955_47850 PF00550 Phosphopantetheine attachment site At15955_47860 PF00550 Phosphopantetheine attachment site At15955_47860 PF00501 AMP-binding enzyme At15955_47860 PF00668 Condensation domain At15955_47860 PF13193 AMP-binding enzyme C-terminal domain At15955_47870 PF00501 AMP-binding enzyme At15955_47870 PF00550 Phosphopantetheine attachment site At15955_47870 PF00501 AMP-binding enzyme At15955_47870 PF13193 AMP-binding enzyme C-terminal domain At15955_47870 PF13193 AMP-binding enzyme C-terminal domain At15955_47870 PF00668 Condensation domain At15955_47870 PF00668 Condensation domain At15955_47870 PF00550 Phosphopantetheine attachment site At15955_47880 PF00550 Phosphopantetheine attachment site At15955_47880 PF00698 Acyl transferase domain At15955_47880 PF00668 Condensation domain At15955_47880 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_47880 PF16197 Ketoacyl-synthetase C-terminal extension At15955_47880 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_47920 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_47920 PF00668 Condensation domain At15955_47920 PF13193 AMP-binding enzyme C-terminal domain At15955_47920 PF00501 AMP-binding enzyme At15955_47920 PF00550 Phosphopantetheine attachment site At15955_47920 PF00202 Aminotransferase class-III At15955_47920 PF16197 Ketoacyl-synthetase C-terminal extension At15955_47920 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_47930 PF13649 Methyltransferase domain At15955_47940 PF00501 AMP-binding enzyme At15955_47940 PF13193 AMP-binding enzyme C-terminal domain At15955_47940 PF00668 Condensation domain At15955_47940 PF00550 Phosphopantetheine attachment site At15955_47950 PF00501 AMP-binding enzyme At15955_47960 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_47960 PF00668 Condensation domain At15955_47960 PF16197 Ketoacyl-synthetase C-terminal extension At15955_47960 PF00698 Acyl transferase domain At15955_47960 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_47960 PF00550 Phosphopantetheine attachment site At15955_47980 PF00550 Phosphopantetheine attachment site At15955_47980 PF00668 Condensation domain At15955_47980 PF13193 AMP-binding enzyme C-terminal domain At15955_47980 PF00501 AMP-binding enzyme At15955_47980 PF00975 Thioesterase domain At15955_47990 PF01554 MatE At15955_48010 PF02261 Aspartate decarboxylase At15955_48050 PF05035 2-keto-3-deoxy-galactonokinase At15955_48060 PF00701 Dihydrodipicolinate synthetase family At15955_48070 PF13378 Enolase C-terminal domain-like At15955_48070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_48090 PF00528 Binding-protein-dependent transport system inner membrane component At15955_48100 PF00528 Binding-protein-dependent transport system inner membrane component At15955_48110 PF17912 MalK OB fold domain At15955_48110 PF00005 ABC transporter At15955_48130 PF09339 IclR helix-turn-helix domain At15955_48130 PF01614 Bacterial transcriptional regulator At15955_48150 PF12833 Helix-turn-helix domain At15955_48150 PF02311 AraC-like ligand binding domain At15955_48170 PF03466 LysR substrate binding domain At15955_48170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_48180 PF00248 Aldo/keto reductase family At15955_48190 PF03466 LysR substrate binding domain At15955_48190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_48200 PF00107 Zinc-binding dehydrogenase At15955_48200 PF08240 Alcohol dehydrogenase GroES-like domain At15955_48220 PF00356 Bacterial regulatory proteins, lacI family At15955_48220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At15955_48230 PF01261 Xylose isomerase-like TIM barrel At15955_48240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_48240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_48250 PF01261 Xylose isomerase-like TIM barrel At15955_48290 PF00005 ABC transporter At15955_48300 PF01032 FecCD transport family At15955_48320 PF00593 TonB dependent receptor At15955_48320 PF07715 TonB-dependent Receptor Plug Domain At15955_48360 PF03552 Cellulose synthase At15955_48360 PF00535 Glycosyl transferase family 2 At15955_48360 PF07238 PilZ domain At15955_48390 PF01717 Cobalamin-independent synthase, Catalytic domain At15955_48390 PF08267 Cobalamin-independent synthase, N-terminal domain At15955_48400 PF14525 AraC-binding-like domain At15955_48410 PF00296 Luciferase-like monooxygenase At15955_48420 PF01613 Flavin reductase like domain At15955_48440 PF00106 short chain dehydrogenase At15955_48450 PF04198 Putative sugar-binding domain At15955_48460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_48460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_48470 PF02780 Transketolase, C-terminal domain At15955_48470 PF02779 Transketolase, pyrimidine binding domain At15955_48480 PF00456 Transketolase, thiamine diphosphate binding domain At15955_48490 PF02653 Branched-chain amino acid transport system / permease component At15955_48500 PF13407 Periplasmic binding protein domain At15955_48510 PF00005 ABC transporter At15955_48530 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At15955_48540 PF13188 PAS domain At15955_48540 PF00072 Response regulator receiver domain At15955_48540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_48540 PF08448 PAS fold At15955_48540 PF00512 His Kinase A (phospho-acceptor) domain At15955_48550 PF06745 KaiC At15955_48560 PF00440 Bacterial regulatory proteins, tetR family At15955_48590 PF07690 Major Facilitator Superfamily At15955_48600 PF01425 Amidase At15955_48630 PF00005 ABC transporter At15955_48640 PF00528 Binding-protein-dependent transport system inner membrane component At15955_48650 PF00528 Binding-protein-dependent transport system inner membrane component At15955_48660 PF17954 Quercetinase C-terminal cupin domain At15955_48660 PF02678 Pirin At15955_48670 PF00857 Isochorismatase family At15955_48680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_48680 PF03466 LysR substrate binding domain At15955_48700 PF01638 HxlR-like helix-turn-helix At15955_48710 PF00550 Phosphopantetheine attachment site At15955_48710 PF00107 Zinc-binding dehydrogenase At15955_48710 PF16197 Ketoacyl-synthetase C-terminal extension At15955_48710 PF00698 Acyl transferase domain At15955_48710 PF08659 KR domain At15955_48710 PF02801 Beta-ketoacyl synthase, C-terminal domain At15955_48710 PF08240 Alcohol dehydrogenase GroES-like domain At15955_48710 PF14765 Polyketide synthase dehydratase At15955_48710 PF00109 Beta-ketoacyl synthase, N-terminal domain At15955_48720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_48720 PF03466 LysR substrate binding domain At15955_48760 PF00042 Globin At15955_48760 PF00970 Oxidoreductase FAD-binding domain At15955_48760 PF00175 Oxidoreductase NAD-binding domain At15955_48770 PF02798 Glutathione S-transferase, N-terminal domain At15955_48780 PF00171 Aldehyde dehydrogenase family At15955_48790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_48790 PF03466 LysR substrate binding domain At15955_48820 PF06745 KaiC At15955_48830 PF07536 HWE histidine kinase At15955_48830 PF13426 PAS domain At15955_48830 PF08447 PAS fold At15955_48850 PF00765 Autoinducer synthase At15955_48890 PF00665 Integrase core domain At15955_48900 PF02371 Transposase IS116/IS110/IS902 family At15955_48900 PF01548 Transposase At15955_48910 PF00665 Integrase core domain At15955_48920 PF01695 IstB-like ATP binding protein At15955_48950 PF02308 MgtC family At15955_48990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_49000 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49010 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49010 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_49020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_49020 PF00005 ABC transporter At15955_49030 PF09587 Bacterial capsule synthesis protein PGA_cap At15955_49040 PF01546 Peptidase family M20/M25/M40 At15955_49040 PF07687 Peptidase dimerisation domain At15955_49060 PF00765 Autoinducer synthase At15955_49070 PF00437 Type II/IV secretion system protein At15955_49080 PF04956 TrbC/VIRB2 family At15955_49090 PF05101 Type IV secretory pathway, VirB3-like protein At15955_49100 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At15955_49120 PF10907 Protein of unknown function (DUF2749) At15955_49130 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At15955_49140 PF04335 VirB8 protein At15955_49150 PF03524 Conjugal transfer protein At15955_49170 PF03743 Bacterial conjugation TrbI-like protein At15955_49200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_49220 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49240 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49250 PF00005 ABC transporter At15955_49260 PF01261 Xylose isomerase-like TIM barrel At15955_49270 PF08501 Shikimate dehydrogenase substrate binding domain At15955_49270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At15955_49270 PF01488 Shikimate / quinate 5-dehydrogenase At15955_49280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At15955_49280 PF01488 Shikimate / quinate 5-dehydrogenase At15955_49280 PF08501 Shikimate dehydrogenase substrate binding domain At15955_49300 PF00701 Dihydrodipicolinate synthetase family At15955_49310 PF00294 pfkB family carbohydrate kinase At15955_49360 PF00248 Aldo/keto reductase family At15955_49390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_49390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_49410 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49430 PF03459 TOBE domain At15955_49430 PF17912 MalK OB fold domain At15955_49430 PF00005 ABC transporter At15955_49460 PF00561 alpha/beta hydrolase fold At15955_49480 PF02371 Transposase IS116/IS110/IS902 family At15955_49480 PF01548 Transposase At15955_49500 PF13407 Periplasmic binding protein domain At15955_49510 PF13407 Periplasmic binding protein domain At15955_49520 PF08125 Mannitol dehydrogenase C-terminal domain At15955_49520 PF01232 Mannitol dehydrogenase Rossmann domain At15955_49530 PF00005 ABC transporter At15955_49540 PF02653 Branched-chain amino acid transport system / permease component At15955_49570 PF13193 AMP-binding enzyme C-terminal domain At15955_49570 PF00501 AMP-binding enzyme At15955_49570 PF16177 Acetyl-coenzyme A synthetase N-terminus At15955_49590 PF03702 Anhydro-N-acetylmuramic acid kinase At15955_49600 PF00356 Bacterial regulatory proteins, lacI family At15955_49610 PF00923 Transaldolase/Fructose-6-phosphate aldolase At15955_49630 PF13407 Periplasmic binding protein domain At15955_49640 PF02653 Branched-chain amino acid transport system / permease component At15955_49650 PF00005 ABC transporter At15955_49660 PF00294 pfkB family carbohydrate kinase At15955_49670 PF04198 Putative sugar-binding domain At15955_49680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At15955_49680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At15955_49700 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49710 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49720 PF00005 ABC transporter At15955_49720 PF08402 TOBE domain At15955_49730 PF08125 Mannitol dehydrogenase C-terminal domain At15955_49730 PF01232 Mannitol dehydrogenase Rossmann domain At15955_49740 PF04055 Radical SAM superfamily At15955_49740 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At15955_49760 PF00561 alpha/beta hydrolase fold At15955_49760 PF00364 Biotin-requiring enzyme At15955_49770 PF02817 e3 binding domain At15955_49770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At15955_49770 PF00364 Biotin-requiring enzyme At15955_49780 PF02779 Transketolase, pyrimidine binding domain At15955_49780 PF02780 Transketolase, C-terminal domain At15955_49790 PF01418 Helix-turn-helix domain, rpiR family At15955_49790 PF01380 SIS domain At15955_49810 PF01979 Amidohydrolase family At15955_49820 PF00005 ABC transporter At15955_49840 PF00528 Binding-protein-dependent transport system inner membrane component At15955_49880 PF13533 Biotin-lipoyl like At15955_49910 PF05717 IS66 Orf2 like protein At15955_49920 PF13005 zinc-finger binding domain of transposase IS66 At15955_49920 PF13817 IS66 C-terminal element At15955_49920 PF03050 Transposase IS66 family At15955_49920 PF13007 Transposase C of IS166 homeodomain At15955_49940 PF00108 Thiolase, N-terminal domain At15955_49940 PF02803 Thiolase, C-terminal domain At15955_49950 PF00378 Enoyl-CoA hydratase/isomerase At15955_49960 PF00106 short chain dehydrogenase At15955_49970 PF00501 AMP-binding enzyme At15955_49970 PF13193 AMP-binding enzyme C-terminal domain At15955_49990 PF07690 Major Facilitator Superfamily At15955_50010 PF01032 FecCD transport family At15955_50020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At15955_50040 PF00171 Aldehyde dehydrogenase family At15955_50060 PF00251 Glycosyl hydrolases family 32 N-terminal domain At15955_50060 PF08244 Glycosyl hydrolases family 32 C terminal At15955_50070 PF05048 Periplasmic copper-binding protein (NosD) At15955_50070 PF18835 Beta helix repeat of Inulin fructotransferase At15955_50080 PF18835 Beta helix repeat of Inulin fructotransferase At15955_50080 PF05048 Periplasmic copper-binding protein (NosD) At15955_50090 PF17912 MalK OB fold domain At15955_50090 PF00005 ABC transporter At15955_50100 PF00528 Binding-protein-dependent transport system inner membrane component At15955_50110 PF00528 Binding-protein-dependent transport system inner membrane component At15955_50120 PF01547 Bacterial extracellular solute-binding protein At15955_50130 PF00356 Bacterial regulatory proteins, lacI family At15955_50210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_50220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_50250 PF12833 Helix-turn-helix domain At15955_50250 PF02311 AraC-like ligand binding domain At15955_50260 PF07715 TonB-dependent Receptor Plug Domain At15955_50260 PF00593 TonB dependent receptor At15955_50270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_50270 PF00672 HAMP domain At15955_50270 PF02203 Tar ligand binding domain homologue At15955_50290 PF01497 Periplasmic binding protein At15955_50300 PF01032 FecCD transport family At15955_50310 PF01032 FecCD transport family At15955_50320 PF00005 ABC transporter At15955_50350 PF00196 Bacterial regulatory proteins, luxR family At15955_50350 PF03472 Autoinducer binding domain At15955_50360 PF09228 Prokaryotic Transcriptional repressor TraM At15955_50370 PF06871 TraH_2 At15955_50380 PF00795 Carbon-nitrogen hydrolase At15955_50390 PF10502 Signal peptidase, peptidase S26 At15955_50400 PF01443 Viral (Superfamily 1) RNA helicase At15955_50400 PF03389 MobA/MobL family At15955_50400 PF17841 BID domain of Bartonella effector protein (Bep) At15955_50410 PF07820 TraC-like protein At15955_50420 PF06412 Conjugal transfer protein TraD At15955_50430 PF02534 Type IV secretory system Conjugative DNA transfer At15955_50450 PF05406 WGR domain At15955_50470 PF05284 Protein of unknown function (DUF736) At15955_50490 PF13362 Toprim domain At15955_50490 PF08401 Domain of unknown function (DUF1738) At15955_50490 PF18818 Metallopeptidase superfamily domain At15955_50520 PF02195 ParB-like nuclease domain At15955_50520 PF17762 HTH domain found in ParB protein At15955_50610 PF02811 PHP domain At15955_50610 PF07733 Bacterial DNA polymerase III alpha NTPase domain At15955_50610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At15955_50610 PF14579 Helix-hairpin-helix motif At15955_50650 PF01068 ATP dependent DNA ligase domain At15955_50650 PF13298 DNA polymerase Ligase (LigD) At15955_50650 PF04679 ATP dependent DNA ligase C terminal region At15955_50670 PF01037 Lrp/AsnC ligand binding domain At15955_50720 PF01047 MarR family At15955_50730 PF07690 Major Facilitator Superfamily At15955_50740 PF07690 Major Facilitator Superfamily At15955_50750 PF12833 Helix-turn-helix domain At15955_50750 PF01965 DJ-1/PfpI family At15955_50760 PF02798 Glutathione S-transferase, N-terminal domain At15955_50760 PF00043 Glutathione S-transferase, C-terminal domain At15955_50770 PF03466 LysR substrate binding domain At15955_50770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_50780 PF16859 Tetracyclin repressor-like, C-terminal domain At15955_50780 PF00440 Bacterial regulatory proteins, tetR family At15955_50790 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_50820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_50820 PF13378 Enolase C-terminal domain-like At15955_50830 PF00701 Dihydrodipicolinate synthetase family At15955_50840 PF07729 FCD domain At15955_50840 PF00392 Bacterial regulatory proteins, gntR family At15955_50850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_50860 PF00528 Binding-protein-dependent transport system inner membrane component At15955_50880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_50880 PF00005 ABC transporter At15955_50890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_50890 PF00005 ABC transporter At15955_50900 PF01970 Tripartite tricarboxylate transporter TctA family At15955_50910 PF07331 Tripartite tricarboxylate transporter TctB family At15955_50920 PF03401 Tripartite tricarboxylate transporter family receptor At15955_50930 PF00356 Bacterial regulatory proteins, lacI family At15955_50940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At15955_50940 PF13378 Enolase C-terminal domain-like At15955_50950 PF03466 LysR substrate binding domain At15955_50950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_50980 PF00486 Transcriptional regulatory protein, C terminal At15955_50980 PF00072 Response regulator receiver domain At15955_50990 PF00989 PAS fold At15955_50990 PF16736 Single Cache-like At15955_50990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_50990 PF00512 His Kinase A (phospho-acceptor) domain At15955_51000 PF00082 Subtilase family At15955_51000 PF05922 Peptidase inhibitor I9 At15955_51010 PF04542 Sigma-70 region 2 At15955_51010 PF08281 Sigma-70, region 4 At15955_51060 PF02595 Glycerate kinase family At15955_51080 PF02530 Porin subfamily At15955_51130 PF00440 Bacterial regulatory proteins, tetR family At15955_51130 PF08361 MAATS-type transcriptional repressor, C-terminal region At15955_51150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At15955_51150 PF00529 HlyD membrane-fusion protein of T1SS At15955_51160 PF00873 AcrB/AcrD/AcrF family At15955_51180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_51180 PF03466 LysR substrate binding domain At15955_51190 PF07690 Major Facilitator Superfamily At15955_51200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_51200 PF03466 LysR substrate binding domain At15955_51210 PF01548 Transposase At15955_51210 PF02371 Transposase IS116/IS110/IS902 family At15955_51220 PF10996 Beta-Casp domain At15955_51220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain At15955_51220 PF00753 Metallo-beta-lactamase superfamily At15955_51250 PF03466 LysR substrate binding domain At15955_51250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_51260 PF02371 Transposase IS116/IS110/IS902 family At15955_51260 PF01548 Transposase At15955_51280 PF13533 Biotin-lipoyl like At15955_51290 PF00005 ABC transporter At15955_51310 PF00871 Acetokinase family At15955_51320 PF09364 XFP N-terminal domain At15955_51320 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase At15955_51320 PF09363 XFP C-terminal domain At15955_51330 PF04945 YHS domain At15955_51340 PF06772 Bacterial low temperature requirement A protein (LtrA) At15955_51360 PF00924 Mechanosensitive ion channel At15955_51370 PF00171 Aldehyde dehydrogenase family At15955_51390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_51390 PF03466 LysR substrate binding domain At15955_51430 PF01979 Amidohydrolase family At15955_51450 PF07286 Protein of unknown function (DUF1445) At15955_51470 PF00005 ABC transporter At15955_51500 PF00221 Aromatic amino acid lyase At15955_51510 PF00571 CBS domain At15955_51510 PF00005 ABC transporter At15955_51520 PF00528 Binding-protein-dependent transport system inner membrane component At15955_51540 PF01979 Amidohydrolase family At15955_51550 PF00384 Molybdopterin oxidoreductase At15955_51550 PF01568 Molydopterin dinucleotide binding domain At15955_51560 PF17392 Urocanase C-terminal domain At15955_51560 PF01175 Urocanase Rossmann-like domain At15955_51560 PF17391 Urocanase N-terminal domain At15955_51570 PF07687 Peptidase dimerisation domain At15955_51570 PF01546 Peptidase family M20/M25/M40 At15955_51600 PF09339 IclR helix-turn-helix domain At15955_51600 PF01614 Bacterial transcriptional regulator At15955_51610 PF00005 ABC transporter At15955_51620 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_51620 PF00005 ABC transporter At15955_51630 PF11862 Domain of unknown function (DUF3382) At15955_51630 PF02653 Branched-chain amino acid transport system / permease component At15955_51640 PF02653 Branched-chain amino acid transport system / permease component At15955_51650 PF13458 Periplasmic binding protein At15955_51750 PF01179 Copper amine oxidase, enzyme domain At15955_51750 PF02728 Copper amine oxidase, N3 domain At15955_51750 PF02727 Copper amine oxidase, N2 domain At15955_51760 PF13520 Amino acid permease At15955_51810 PF00005 ABC transporter At15955_51820 PF02653 Branched-chain amino acid transport system / permease component At15955_51830 PF13407 Periplasmic binding protein domain At15955_51840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_51840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_51850 PF01261 Xylose isomerase-like TIM barrel At15955_51860 PF00294 pfkB family carbohydrate kinase At15955_51870 PF00205 Thiamine pyrophosphate enzyme, central domain At15955_51870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At15955_51870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At15955_51880 PF04962 KduI/IolB family At15955_51890 PF14552 Tautomerase enzyme At15955_51900 PF01548 Transposase At15955_51900 PF02371 Transposase IS116/IS110/IS902 family At15955_51930 PF00005 ABC transporter At15955_51930 PF00664 ABC transporter transmembrane region At15955_51950 PF01965 DJ-1/PfpI family At15955_51950 PF12833 Helix-turn-helix domain At15955_51960 PF01965 DJ-1/PfpI family At15955_51980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_51990 PF00528 Binding-protein-dependent transport system inner membrane component At15955_52000 PF00528 Binding-protein-dependent transport system inner membrane component At15955_52000 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_52010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_52010 PF00005 ABC transporter At15955_52020 PF00455 DeoR C terminal sensor domain At15955_52020 PF08220 DeoR-like helix-turn-helix domain At15955_52030 PF01546 Peptidase family M20/M25/M40 At15955_52060 PF00459 Inositol monophosphatase family At15955_52070 PF06751 Ethanolamine ammonia lyase large subunit (EutB) At15955_52080 PF05985 Ethanolamine ammonia-lyase light chain (EutC) At15955_52100 PF12833 Helix-turn-helix domain At15955_52100 PF06719 AraC-type transcriptional regulator N-terminus At15955_52130 PF13533 Biotin-lipoyl like At15955_52170 PF00924 Mechanosensitive ion channel At15955_52230 PF13458 Periplasmic binding protein At15955_52240 PF02653 Branched-chain amino acid transport system / permease component At15955_52260 PF00005 ABC transporter At15955_52260 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_52270 PF09383 NIL domain At15955_52270 PF00005 ABC transporter At15955_52280 PF00795 Carbon-nitrogen hydrolase At15955_52290 PF01810 LysE type translocator At15955_52300 PF00171 Aldehyde dehydrogenase family At15955_52310 PF01791 DeoC/LacD family aldolase At15955_52320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At15955_52320 PF00294 pfkB family carbohydrate kinase At15955_52340 PF02653 Branched-chain amino acid transport system / permease component At15955_52350 PF02653 Branched-chain amino acid transport system / permease component At15955_52360 PF00005 ABC transporter At15955_52370 PF13407 Periplasmic binding protein domain At15955_52380 PF00455 DeoR C terminal sensor domain At15955_52380 PF08220 DeoR-like helix-turn-helix domain At15955_52390 PF00455 DeoR C terminal sensor domain At15955_52390 PF08220 DeoR-like helix-turn-helix domain At15955_52410 PF00005 ABC transporter At15955_52420 PF01032 FecCD transport family At15955_52430 PF01032 FecCD transport family At15955_52450 PF01497 Periplasmic binding protein At15955_52460 PF07715 TonB-dependent Receptor Plug Domain At15955_52460 PF00593 TonB dependent receptor At15955_52490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_52490 PF03466 LysR substrate binding domain At15955_52500 PF00248 Aldo/keto reductase family At15955_52530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At15955_52530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At15955_52540 PF00005 ABC transporter At15955_52560 PF02653 Branched-chain amino acid transport system / permease component At15955_52580 PF00005 ABC transporter At15955_52580 PF12399 Branched-chain amino acid ATP-binding cassette transporter At15955_52590 PF00296 Luciferase-like monooxygenase At15955_52600 PF03358 NADPH-dependent FMN reductase At15955_52630 PF00313 'Cold-shock' DNA-binding domain At15955_52660 PF02875 Mur ligase family, glutamate ligase domain At15955_52660 PF08245 Mur ligase middle domain At15955_52660 PF01225 Mur ligase family, catalytic domain At15955_52670 PF13533 Biotin-lipoyl like At15955_52680 PF00664 ABC transporter transmembrane region At15955_52680 PF03412 Peptidase C39 family At15955_52680 PF00005 ABC transporter At15955_52700 PF02321 Outer membrane efflux protein At15955_52720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At15955_52720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At15955_52730 PF00005 ABC transporter At15955_52740 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_52750 PF00356 Bacterial regulatory proteins, lacI family At15955_52760 PF13614 AAA domain At15955_52770 PF02195 ParB-like nuclease domain At15955_52770 PF07506 RepB plasmid partitioning protein At15955_52780 PF03428 Replication protein C N-terminal domain At15955_52780 PF11800 Replication protein C C-terminal region At15955_52790 PF00239 Resolvase, N terminal domain At15955_52800 PF00589 Phage integrase family At15955_53050 PF13005 zinc-finger binding domain of transposase IS66 At15955_53050 PF03050 Transposase IS66 family At15955_53050 PF13817 IS66 C-terminal element At15955_53050 PF13007 Transposase C of IS166 homeodomain At15955_53060 PF00067 Cytochrome P450 At15955_53070 PF00067 Cytochrome P450 At15955_53080 PF06903 VirK protein At15955_53100 PF00512 His Kinase A (phospho-acceptor) domain At15955_53100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At15955_53120 PF01464 Transglycosylase SLT domain At15955_53130 PF04956 TrbC/VIRB2 family At15955_53140 PF05101 Type IV secretory pathway, VirB3-like protein At15955_53150 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At15955_53170 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At15955_53180 PF17413 Outer membrane lipoprotein virB7 At15955_53190 PF04335 VirB8 protein At15955_53200 PF03524 Conjugal transfer protein At15955_53210 PF03743 Bacterial conjugation TrbI-like protein At15955_53220 PF00437 Type II/IV secretion system protein At15955_53230 PF00486 Transcriptional regulatory protein, C terminal At15955_53230 PF00072 Response regulator receiver domain At15955_53250 PF13007 Transposase C of IS166 homeodomain At15955_53250 PF13817 IS66 C-terminal element At15955_53250 PF03050 Transposase IS66 family At15955_53250 PF13005 zinc-finger binding domain of transposase IS66 At15955_53260 PF13005 zinc-finger binding domain of transposase IS66 At15955_53260 PF13007 Transposase C of IS166 homeodomain At15955_53260 PF13817 IS66 C-terminal element At15955_53260 PF03050 Transposase IS66 family At15955_53270 PF05717 IS66 Orf2 like protein At15955_53280 PF01527 Transposase At15955_53290 PF13817 IS66 C-terminal element At15955_53290 PF13007 Transposase C of IS166 homeodomain At15955_53290 PF03050 Transposase IS66 family At15955_53290 PF13005 zinc-finger binding domain of transposase IS66 At15955_53300 PF05717 IS66 Orf2 like protein At15955_53320 PF07181 VirC2 protein At15955_53330 PF07015 VirC1 protein At15955_53340 PF07328 T-DNA border endonuclease VirD1 At15955_53350 PF03432 Relaxase/Mobilisation nuclease domain At15955_53370 PF02534 Type IV secretory system Conjugative DNA transfer At15955_53380 PF02534 Type IV secretory system Conjugative DNA transfer At15955_53400 PF12189 Single-strand DNA-binding protein At15955_53410 PF07229 VirE2 At15955_53460 PF00313 'Cold-shock' DNA-binding domain At15955_53480 PF17841 BID domain of Bartonella effector protein (Bep) At15955_53480 PF03389 MobA/MobL family At15955_53480 PF01443 Viral (Superfamily 1) RNA helicase At15955_53490 PF17841 BID domain of Bartonella effector protein (Bep) At15955_53490 PF03389 MobA/MobL family At15955_53490 PF01443 Viral (Superfamily 1) RNA helicase At15955_53500 PF10502 Signal peptidase, peptidase S26 At15955_53540 PF13419 Haloacid dehalogenase-like hydrolase At15955_53560 PF01980 tRNA-methyltransferase O At15955_53580 PF01695 IstB-like ATP binding protein At15955_53590 PF00665 Integrase core domain At15955_53610 PF01548 Transposase At15955_53610 PF02371 Transposase IS116/IS110/IS902 family At15955_53630 PF00665 Integrase core domain At15955_53650 PF02027 RolB/RolC glucosidase family At15955_53660 PF01425 Amidase At15955_53670 PF01593 Flavin containing amine oxidoreductase At15955_53670 PF02027 RolB/RolC glucosidase family At15955_53690 PF02027 RolB/RolC glucosidase family At15955_53700 PF02027 RolB/RolC glucosidase family At15955_53710 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain At15955_53720 PF03050 Transposase IS66 family At15955_53720 PF13817 IS66 C-terminal element At15955_53720 PF13007 Transposase C of IS166 homeodomain At15955_53720 PF13005 zinc-finger binding domain of transposase IS66 At15955_53780 PF01380 SIS domain At15955_53790 PF00300 Histidine phosphatase superfamily (branch 1) At15955_53790 PF00106 short chain dehydrogenase At15955_53800 PF01321 Creatinase/Prolidase N-terminal domain At15955_53800 PF00557 Metallopeptidase family M24 At15955_53860 PF00216 Bacterial DNA-binding protein At15955_53890 PF02534 Type IV secretory system Conjugative DNA transfer At15955_53900 PF06412 Conjugal transfer protein TraD At15955_53910 PF07820 TraC-like protein At15955_53920 PF17841 BID domain of Bartonella effector protein (Bep) At15955_53920 PF03389 MobA/MobL family At15955_53920 PF01443 Viral (Superfamily 1) RNA helicase At15955_53930 PF10502 Signal peptidase, peptidase S26 At15955_53940 PF00795 Carbon-nitrogen hydrolase At15955_53950 PF06871 TraH_2 At15955_53970 PF09228 Prokaryotic Transcriptional repressor TraM At15955_53990 PF00196 Bacterial regulatory proteins, luxR family At15955_53990 PF03472 Autoinducer binding domain At15955_54000 PF00005 ABC transporter At15955_54000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_54010 PF12911 N-terminal TM domain of oligopeptide transport permease C At15955_54010 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54020 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_54050 PF02423 Ornithine cyclodeaminase/mu-crystallin family At15955_54080 PF07992 Pyridine nucleotide-disulphide oxidoreductase At15955_54080 PF04324 BFD-like [2Fe-2S] binding domain At15955_54100 PF01266 FAD dependent oxidoreductase At15955_54110 PF00497 Bacterial extracellular solute-binding proteins, family 3 At15955_54120 PF00005 ABC transporter At15955_54130 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54140 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54150 PF03466 LysR substrate binding domain At15955_54150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At15955_54160 PF02203 Tar ligand binding domain homologue At15955_54160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_54160 PF00672 HAMP domain At15955_54170 PF00196 Bacterial regulatory proteins, luxR family At15955_54170 PF03472 Autoinducer binding domain At15955_54180 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54190 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54200 PF08402 TOBE domain At15955_54200 PF00005 ABC transporter At15955_54220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At15955_54220 PF00672 HAMP domain At15955_54250 PF08402 TOBE domain At15955_54250 PF00005 ABC transporter At15955_54260 PF01321 Creatinase/Prolidase N-terminal domain At15955_54260 PF00557 Metallopeptidase family M24 At15955_54270 PF00294 pfkB family carbohydrate kinase At15955_54300 PF00106 short chain dehydrogenase At15955_54320 PF00920 Dehydratase family At15955_54330 PF00248 Aldo/keto reductase family At15955_54360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At15955_54380 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54390 PF00005 ABC transporter At15955_54390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_54400 PF01266 FAD dependent oxidoreductase At15955_54410 PF01968 Hydantoinase/oxoprolinase At15955_54410 PF05378 Hydantoinase/oxoprolinase N-terminal region At15955_54450 PF08220 DeoR-like helix-turn-helix domain At15955_54450 PF00455 DeoR C terminal sensor domain At15955_54470 PF00528 Binding-protein-dependent transport system inner membrane component At15955_54490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At15955_54490 PF00005 ABC transporter At15955_54510 PF03743 Bacterial conjugation TrbI-like protein At15955_54530 PF03524 Conjugal transfer protein At15955_54540 PF04335 VirB8 protein At15955_54550 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At15955_54560 PF10907 Protein of unknown function (DUF2749) At15955_54580 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At15955_54590 PF05101 Type IV secretory pathway, VirB3-like protein At15955_54600 PF04956 TrbC/VIRB2 family At15955_54610 PF00437 Type II/IV secretion system protein At15955_54620 PF00765 Autoinducer synthase