locus-tag class description At1D1108_00010 PF00308 Bacterial dnaA protein At1D1108_00010 PF08299 Bacterial dnaA protein helix-turn-helix At1D1108_00010 PF11638 DnaA N-terminal domain At1D1108_00020 PF06969 HemN C-terminal domain At1D1108_00020 PF04055 Radical SAM superfamily At1D1108_00030 PF01725 Ham1 family At1D1108_00040 PF03725 3' exoribonuclease family, domain 2 At1D1108_00040 PF01138 3' exoribonuclease family, domain 1 At1D1108_00050 PF01628 HrcA protein C terminal domain At1D1108_00060 PF01025 GrpE At1D1108_00070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 At1D1108_00080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein At1D1108_00080 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus At1D1108_00090 PF04963 Sigma-54 factor, core binding domain At1D1108_00090 PF00309 Sigma-54 factor, Activator interacting domain (AID) At1D1108_00090 PF04552 Sigma-54, DNA binding domain At1D1108_00100 PF00005 ABC transporter At1D1108_00110 PF03968 OstA-like protein At1D1108_00130 PF01343 Peptidase family S49 At1D1108_00140 PF00216 Bacterial DNA-binding protein At1D1108_00160 PF10672 S-adenosylmethionine-dependent methyltransferase At1D1108_00160 PF02926 THUMP domain At1D1108_00160 PF01170 Putative RNA methylase family UPF0020 At1D1108_00170 PF08032 RNA 2'-O ribose methyltransferase substrate binding At1D1108_00170 PF00588 SpoU rRNA Methylase family At1D1108_00180 PF01252 Signal peptidase (SPase) II At1D1108_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_00190 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_00190 PF01627 Hpt domain At1D1108_00190 PF00072 Response regulator receiver domain At1D1108_00190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At1D1108_00190 PF00672 HAMP domain At1D1108_00210 PF05190 MutS family domain IV At1D1108_00210 PF05192 MutS domain III At1D1108_00210 PF01624 MutS domain I At1D1108_00210 PF05188 MutS domain II At1D1108_00210 PF00488 MutS domain V At1D1108_00220 PF08335 GlnD PII-uridylyltransferase At1D1108_00220 PF01909 Nucleotidyltransferase domain At1D1108_00220 PF01842 ACT domain At1D1108_00220 PF01966 HD domain At1D1108_00230 PF03023 Lipid II flippase MurJ At1D1108_00250 PF00579 tRNA synthetases class I (W and Y) At1D1108_00270 PF01106 NifU-like domain At1D1108_00280 PF00814 Glycoprotease family At1D1108_00290 PF00583 Acetyltransferase (GNAT) family At1D1108_00290 PF00814 Glycoprotease family At1D1108_00300 PF01475 Ferric uptake regulator family At1D1108_00310 PF01553 Acyltransferase At1D1108_00320 PF00919 Uncharacterized protein family UPF0004 At1D1108_00320 PF01938 TRAM domain At1D1108_00320 PF04055 Radical SAM superfamily At1D1108_00330 PF02562 PhoH-like protein At1D1108_00340 PF02130 Uncharacterized protein family UPF0054 At1D1108_00350 PF03471 Transporter associated domain At1D1108_00350 PF00571 CBS domain At1D1108_00360 PF00795 Carbon-nitrogen hydrolase At1D1108_00370 PF01381 Helix-turn-helix At1D1108_00380 PF02772 S-adenosylmethionine synthetase, central domain At1D1108_00380 PF02773 S-adenosylmethionine synthetase, C-terminal domain At1D1108_00380 PF00438 S-adenosylmethionine synthetase, N-terminal domain At1D1108_00390 PF02390 Putative methyltransferase At1D1108_00400 PF00294 pfkB family carbohydrate kinase At1D1108_00410 PF02646 RmuC family At1D1108_00420 PF01327 Polypeptide deformylase At1D1108_00430 PF02911 Formyl transferase, C-terminal domain At1D1108_00430 PF00551 Formyl transferase At1D1108_00440 PF01416 tRNA pseudouridine synthase At1D1108_00460 PF01546 Peptidase family M20/M25/M40 At1D1108_00460 PF07687 Peptidase dimerisation domain At1D1108_00470 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_00470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal At1D1108_00470 PF14602 Hexapeptide repeat of succinyl-transferase At1D1108_00490 PF02203 Tar ligand binding domain homologue At1D1108_00490 PF00672 HAMP domain At1D1108_00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_00500 PF01156 Inosine-uridine preferring nucleoside hydrolase At1D1108_00510 PF00011 Hsp20/alpha crystallin family At1D1108_00560 PF00696 Amino acid kinase family At1D1108_00580 PF01926 50S ribosome-binding GTPase At1D1108_00590 PF02096 60Kd inner membrane protein At1D1108_00590 PF14849 YidC periplasmic domain At1D1108_00600 PF00825 Ribonuclease P At1D1108_00610 PF02203 Tar ligand binding domain homologue At1D1108_00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_00610 PF00672 HAMP domain At1D1108_00620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_00620 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_00630 PF01209 ubiE/COQ5 methyltransferase family At1D1108_00640 PF00005 ABC transporter At1D1108_00650 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_00660 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_00680 PF00149 Calcineurin-like phosphoesterase At1D1108_00690 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain At1D1108_00690 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain At1D1108_00710 PF05544 Proline racemase At1D1108_00720 PF01979 Amidohydrolase family At1D1108_00730 PF00156 Phosphoribosyl transferase domain At1D1108_00740 PF00294 pfkB family carbohydrate kinase At1D1108_00770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At1D1108_00770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At1D1108_00780 PF00342 Phosphoglucose isomerase At1D1108_00790 PF00501 AMP-binding enzyme At1D1108_00790 PF13193 AMP-binding enzyme C-terminal domain At1D1108_00800 PF08402 TOBE domain At1D1108_00800 PF00005 ABC transporter At1D1108_00820 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_00830 PF07715 TonB-dependent Receptor Plug Domain At1D1108_00830 PF00593 TonB dependent receptor At1D1108_00870 PF01679 Proteolipid membrane potential modulator At1D1108_00900 PF03976 Polyphosphate kinase 2 (PPK2) At1D1108_00910 PF00989 PAS fold At1D1108_00910 PF16736 Single Cache-like At1D1108_00910 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_00920 PF12849 PBP superfamily domain At1D1108_00930 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_00940 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_00950 PF00005 ABC transporter At1D1108_00960 PF01895 PhoU domain At1D1108_00970 PF00072 Response regulator receiver domain At1D1108_00970 PF00486 Transcriptional regulatory protein, C terminal At1D1108_00990 PF00202 Aminotransferase class-III At1D1108_01000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At1D1108_01000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At1D1108_01010 PF01430 Hsp33 protein At1D1108_01020 PF04379 ApaG domain At1D1108_01030 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1108_01040 PF00692 dUTPase At1D1108_01050 PF00230 Major intrinsic protein At1D1108_01130 PF00072 Response regulator receiver domain At1D1108_01130 PF00196 Bacterial regulatory proteins, luxR family At1D1108_01150 PF01180 Dihydroorotate dehydrogenase At1D1108_01180 PF08241 Methyltransferase domain At1D1108_01220 PF02082 Transcriptional regulator At1D1108_01230 PF00271 Helicase conserved C-terminal domain At1D1108_01230 PF08494 DEAD/H associated At1D1108_01230 PF00270 DEAD/DEAH box helicase At1D1108_01270 PF01925 Sulfite exporter TauE/SafE At1D1108_01290 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_01290 PF12806 Acetyl-CoA dehydrogenase C-terminal like At1D1108_01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_01300 PF00108 Thiolase, N-terminal domain At1D1108_01300 PF02803 Thiolase, C-terminal domain At1D1108_01310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At1D1108_01310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At1D1108_01310 PF00378 Enoyl-CoA hydratase/isomerase At1D1108_01330 PF01555 DNA methylase At1D1108_01340 PF03334 Na+/H+ antiporter subunit At1D1108_01350 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At1D1108_01360 PF01899 Na+/H+ ion antiporter subunit At1D1108_01370 PF00361 Proton-conducting membrane transporter At1D1108_01380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At1D1108_01390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At1D1108_01390 PF13244 Domain of unknown function (DUF4040) At1D1108_01390 PF00361 Proton-conducting membrane transporter At1D1108_01390 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At1D1108_01410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_01440 PF02895 Signal transducing histidine kinase, homodimeric domain At1D1108_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_01440 PF01584 CheW-like domain At1D1108_01440 PF01627 Hpt domain At1D1108_01450 PF03705 CheR methyltransferase, all-alpha domain At1D1108_01450 PF01739 CheR methyltransferase, SAM binding domain At1D1108_01460 PF01339 CheB methylesterase At1D1108_01460 PF00072 Response regulator receiver domain At1D1108_01470 PF00072 Response regulator receiver domain At1D1108_01480 PF03975 CheD chemotactic sensory transduction At1D1108_01500 PF01514 Secretory protein of YscJ/FliF family At1D1108_01500 PF08345 Flagellar M-ring protein C-terminal At1D1108_01510 PF00196 Bacterial regulatory proteins, luxR family At1D1108_01510 PF03472 Autoinducer binding domain At1D1108_01530 PF00672 HAMP domain At1D1108_01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_01540 PF01627 Hpt domain At1D1108_01540 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_01540 PF00672 HAMP domain At1D1108_01540 PF00072 Response regulator receiver domain At1D1108_01550 PF01741 Large-conductance mechanosensitive channel, MscL At1D1108_01560 PF00155 Aminotransferase class I and II At1D1108_01570 PF01370 NAD dependent epimerase/dehydratase family At1D1108_01590 PF03884 DNA gyrase inhibitor YacG At1D1108_01600 PF02545 Maf-like protein At1D1108_01610 PF01176 Translation initiation factor 1A / IF-1 At1D1108_01630 PF06793 Uncharacterised protein family (UPF0262) At1D1108_01640 PF00815 Histidinol dehydrogenase At1D1108_01660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At1D1108_01680 PF00700 Bacterial flagellin C-terminal helical region At1D1108_01680 PF00669 Bacterial flagellin N-terminal helical region At1D1108_01690 PF00700 Bacterial flagellin C-terminal helical region At1D1108_01690 PF00669 Bacterial flagellin N-terminal helical region At1D1108_01700 PF00700 Bacterial flagellin C-terminal helical region At1D1108_01700 PF00669 Bacterial flagellin N-terminal helical region At1D1108_01710 PF00813 FliP family At1D1108_01730 PF02107 Flagellar L-ring protein At1D1108_01750 PF02119 Flagellar P-ring protein At1D1108_01760 PF13144 Chaperone for flagella basal body P-ring formation At1D1108_01770 PF00460 Flagella basal body rod protein At1D1108_01770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1108_01780 PF02049 Flagellar hook-basal body complex protein FliE At1D1108_01790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1108_01800 PF00460 Flagella basal body rod protein At1D1108_01820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1108_01820 PF18269 T3SS EscN ATPase C-terminal domain At1D1108_01830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1108_01830 PF00460 Flagella basal body rod protein At1D1108_01850 PF01618 MotA/TolQ/ExbB proton channel family At1D1108_01860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At1D1108_01870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At1D1108_01880 PF14842 FliG N-terminal domain At1D1108_01880 PF01706 FliG C-terminal domain At1D1108_01880 PF14841 FliG middle domain At1D1108_01890 PF01312 FlhB HrpN YscU SpaS Family At1D1108_01910 PF00700 Bacterial flagellin C-terminal helical region At1D1108_01910 PF00669 Bacterial flagellin N-terminal helical region At1D1108_01930 PF13677 Membrane MotB of proton-channel complex MotA/MotB At1D1108_01930 PF00691 OmpA family At1D1108_01950 PF02120 Flagellar hook-length control protein FliK At1D1108_01970 PF00486 Transcriptional regulatory protein, C terminal At1D1108_01980 PF07559 Flagellar basal body protein FlaE At1D1108_01980 PF00460 Flagella basal body rod protein At1D1108_01980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1108_02020 PF07378 Flagellar protein FlbT At1D1108_02030 PF03963 Flagellar hook capping protein - N-terminal region At1D1108_02040 PF01313 Bacterial export proteins, family 3 At1D1108_02050 PF00771 FHIPEP family At1D1108_02060 PF01311 Bacterial export proteins, family 1 At1D1108_02130 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain At1D1108_02130 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain At1D1108_02140 PF00356 Bacterial regulatory proteins, lacI family At1D1108_02150 PF01547 Bacterial extracellular solute-binding protein At1D1108_02160 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_02170 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_02180 PF00128 Alpha amylase, catalytic domain At1D1108_02190 PF00005 ABC transporter At1D1108_02190 PF17912 MalK OB fold domain At1D1108_02190 PF03459 TOBE domain At1D1108_02220 PF00920 Dehydratase family At1D1108_02230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase At1D1108_02240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At1D1108_02240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At1D1108_02260 PF01266 FAD dependent oxidoreductase At1D1108_02270 PF00120 Glutamine synthetase, catalytic domain At1D1108_02320 PF00463 Isocitrate lyase family At1D1108_02330 PF01381 Helix-turn-helix At1D1108_02330 PF06114 IrrE N-terminal-like domain At1D1108_02330 PF09856 Predicted transcriptional regulator (DUF2083) At1D1108_02340 PF13416 Bacterial extracellular solute-binding protein At1D1108_02350 PF00005 ABC transporter At1D1108_02350 PF08402 TOBE domain At1D1108_02360 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_02370 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_02390 PF13426 PAS domain At1D1108_02390 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_02390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_02390 PF00989 PAS fold At1D1108_02390 PF13188 PAS domain At1D1108_02410 PF02541 Ppx/GppA phosphatase family At1D1108_02420 PF01728 FtsJ-like methyltransferase At1D1108_02430 PF07690 Major Facilitator Superfamily At1D1108_02440 PF00753 Metallo-beta-lactamase superfamily At1D1108_02450 PF00478 IMP dehydrogenase / GMP reductase domain At1D1108_02450 PF00571 CBS domain At1D1108_02470 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_02470 PF00107 Zinc-binding dehydrogenase At1D1108_02480 PF01738 Dienelactone hydrolase family At1D1108_02490 PF00994 Probable molybdopterin binding domain At1D1108_02500 PF00288 GHMP kinases N terminal domain At1D1108_02500 PF08544 GHMP kinases C terminal At1D1108_02520 PF00348 Polyprenyl synthetase At1D1108_02550 PF06965 Na+/H+ antiporter 1 At1D1108_02550 PF01343 Peptidase family S49 At1D1108_02570 PF02091 Glycyl-tRNA synthetase alpha subunit At1D1108_02580 PF04011 LemA family At1D1108_02590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At1D1108_02610 PF02092 Glycyl-tRNA synthetase beta subunit At1D1108_02610 PF05746 DALR anticodon binding domain At1D1108_02620 PF04463 Protein of unknown function (DUF523) At1D1108_02630 PF00672 HAMP domain At1D1108_02630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_02630 PF17200 Single Cache domain 2 At1D1108_02650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain At1D1108_02650 PF02844 Phosphoribosylglycinamide synthetase, N domain At1D1108_02650 PF02843 Phosphoribosylglycinamide synthetase, C domain At1D1108_02660 PF00575 S1 RNA binding domain At1D1108_02660 PF09371 Tex-like protein N-terminal domain At1D1108_02660 PF17674 HHH domain At1D1108_02660 PF16921 Tex protein YqgF-like domain At1D1108_02690 PF01040 UbiA prenyltransferase family At1D1108_02720 PF03466 LysR substrate binding domain At1D1108_02720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_02740 PF04107 Glutamate-cysteine ligase family 2(GCS2) At1D1108_02750 PF04452 RNA methyltransferase At1D1108_02760 PF01384 Phosphate transporter family At1D1108_02780 PF05116 Sucrose-6F-phosphate phosphohydrolase At1D1108_02790 PF00534 Glycosyl transferases group 1 At1D1108_02790 PF13439 Glycosyltransferase Family 4 At1D1108_02800 PF00392 Bacterial regulatory proteins, gntR family At1D1108_02800 PF07729 FCD domain At1D1108_02820 PF03466 LysR substrate binding domain At1D1108_02820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_02830 PF02913 FAD linked oxidases, C-terminal domain At1D1108_02830 PF01565 FAD binding domain At1D1108_02850 PF01565 FAD binding domain At1D1108_02860 PF02754 Cysteine-rich domain At1D1108_02860 PF13183 4Fe-4S dicluster domain At1D1108_02880 PF17969 L,D-transpeptidase C-terminal domain At1D1108_02880 PF03734 L,D-transpeptidase catalytic domain At1D1108_02890 PF03352 Methyladenine glycosylase At1D1108_02910 PF03601 Conserved hypothetical protein 698 At1D1108_02920 PF03466 LysR substrate binding domain At1D1108_02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_02960 PF13393 Histidyl-tRNA synthetase At1D1108_02960 PF03129 Anticodon binding domain At1D1108_02980 PF13393 Histidyl-tRNA synthetase At1D1108_02990 PF01634 ATP phosphoribosyltransferase At1D1108_03000 PF07681 DoxX At1D1108_03020 PF00118 TCP-1/cpn60 chaperonin family At1D1108_03030 PF00166 Chaperonin 10 Kd subunit At1D1108_03050 PF01687 Riboflavin kinase At1D1108_03050 PF06574 FAD synthetase At1D1108_03060 PF00133 tRNA synthetases class I (I, L, M and V) At1D1108_03060 PF08264 Anticodon-binding domain of tRNA At1D1108_03080 PF14437 MafB19-like deaminase At1D1108_03090 PF00849 RNA pseudouridylate synthase At1D1108_03090 PF01479 S4 domain At1D1108_03110 PF01734 Patatin-like phospholipase At1D1108_03120 PF00999 Sodium/hydrogen exchanger family At1D1108_03120 PF02254 TrkA-N domain At1D1108_03130 PF01523 Putative modulator of DNA gyrase At1D1108_03160 PF00534 Glycosyl transferases group 1 At1D1108_03160 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) At1D1108_03180 PF02606 Tetraacyldisaccharide-1-P 4'-kinase At1D1108_03200 PF01119 DNA mismatch repair protein, C-terminal domain At1D1108_03200 PF08676 MutL C terminal dimerisation domain At1D1108_03210 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_03210 PF00072 Response regulator receiver domain At1D1108_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_03210 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_03210 PF01627 Hpt domain At1D1108_03210 PF00989 PAS fold At1D1108_03220 PF13188 PAS domain At1D1108_03220 PF00563 EAL domain At1D1108_03220 PF03707 Bacterial signalling protein N terminal repeat At1D1108_03220 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_03230 PF08450 SMP-30/Gluconolactonase/LRE-like region At1D1108_03240 PF01081 KDPG and KHG aldolase At1D1108_03250 PF05035 2-keto-3-deoxy-galactonokinase At1D1108_03280 PF03472 Autoinducer binding domain At1D1108_03280 PF00196 Bacterial regulatory proteins, luxR family At1D1108_03300 PF10609 NUBPL iron-transfer P-loop NTPase At1D1108_03310 PF01544 CorA-like Mg2+ transporter protein At1D1108_03320 PF02705 K+ potassium transporter At1D1108_03340 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter At1D1108_03350 PF00119 ATP synthase A chain At1D1108_03360 PF00137 ATP synthase subunit C At1D1108_03370 PF00430 ATP synthase B/B' CF(0) At1D1108_03380 PF00430 ATP synthase B/B' CF(0) At1D1108_03400 PF01351 Ribonuclease HII At1D1108_03430 PF01565 FAD binding domain At1D1108_03430 PF02913 FAD linked oxidases, C-terminal domain At1D1108_03440 PF01300 Telomere recombination At1D1108_03440 PF03481 Putative GTP-binding controlling metal-binding At1D1108_03460 PF00355 Rieske [2Fe-2S] domain At1D1108_03460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At1D1108_03470 PF00970 Oxidoreductase FAD-binding domain At1D1108_03470 PF00175 Oxidoreductase NAD-binding domain At1D1108_03470 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1108_03480 PF07886 BA14K-like protein At1D1108_03490 PF07886 BA14K-like protein At1D1108_03510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_03510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_03510 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_03510 PF12806 Acetyl-CoA dehydrogenase C-terminal like At1D1108_03540 PF05958 tRNA (Uracil-5-)-methyltransferase At1D1108_03550 PF01728 FtsJ-like methyltransferase At1D1108_03550 PF01479 S4 domain At1D1108_03560 PF00672 HAMP domain At1D1108_03560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_03610 PF02780 Transketolase, C-terminal domain At1D1108_03610 PF02779 Transketolase, pyrimidine binding domain At1D1108_03610 PF13292 1-deoxy-D-xylulose-5-phosphate synthase At1D1108_03620 PF02678 Pirin At1D1108_03620 PF05726 Pirin C-terminal cupin domain At1D1108_03630 PF02609 Exonuclease VII small subunit At1D1108_03640 PF00850 Histone deacetylase domain At1D1108_03650 PF02632 BioY family At1D1108_03660 PF02361 Cobalt transport protein At1D1108_03670 PF00005 ABC transporter At1D1108_03680 PF06224 Winged helix DNA-binding domain At1D1108_03700 PF01264 Chorismate synthase At1D1108_03720 PF00300 Histidine phosphatase superfamily (branch 1) At1D1108_03740 PF00226 DnaJ domain At1D1108_03740 PF01556 DnaJ C terminal domain At1D1108_03740 PF00684 DnaJ central domain At1D1108_03760 PF01243 Pyridoxamine 5'-phosphate oxidase At1D1108_03760 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region At1D1108_03790 PF13419 Haloacid dehalogenase-like hydrolase At1D1108_03810 PF01523 Putative modulator of DNA gyrase At1D1108_03830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At1D1108_03830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At1D1108_03840 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1108_03850 PF01040 UbiA prenyltransferase family At1D1108_03870 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 At1D1108_03880 PF00510 Cytochrome c oxidase subunit III At1D1108_03900 PF02104 SURF1 family At1D1108_03910 PF02401 LytB protein At1D1108_03920 PF01636 Phosphotransferase enzyme family At1D1108_03930 PF00075 RNase H At1D1108_03950 PF08534 Redoxin At1D1108_03950 PF00462 Glutaredoxin At1D1108_03970 PF02622 Uncharacterized ACR, COG1678 At1D1108_03990 PF10005 zinc-ribbon domain At1D1108_03990 PF15887 Putative zinc-binding metallo-peptidase At1D1108_04000 PF13185 GAF domain At1D1108_04000 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_04000 PF00563 EAL domain At1D1108_04010 PF13302 Acetyltransferase (GNAT) domain At1D1108_04020 PF05193 Peptidase M16 inactive domain At1D1108_04020 PF00675 Insulinase (Peptidase family M16) At1D1108_04030 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_04030 PF14821 Threonine synthase N terminus At1D1108_04050 PF13419 Haloacid dehalogenase-like hydrolase At1D1108_04090 PF18755 Restriction Enzyme Adenine Methylase Associated At1D1108_04090 PF01555 DNA methylase At1D1108_04110 PF14815 NUDIX domain At1D1108_04110 PF00730 HhH-GPD superfamily base excision DNA repair protein At1D1108_04110 PF00633 Helix-hairpin-helix motif At1D1108_04130 PF13462 Thioredoxin At1D1108_04140 PF02463 RecF/RecN/SMC N terminal domain At1D1108_04150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_04160 PF00391 PEP-utilising enzyme, mobile domain At1D1108_04160 PF02896 PEP-utilising enzyme, TIM barrel domain At1D1108_04160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain At1D1108_04220 PF13180 PDZ domain At1D1108_04230 PF06039 Malate:quinone oxidoreductase (Mqo) At1D1108_04280 PF00009 Elongation factor Tu GTP binding domain At1D1108_04290 PF01507 Phosphoadenosine phosphosulfate reductase family At1D1108_04300 PF01507 Phosphoadenosine phosphosulfate reductase family At1D1108_04310 PF02082 Transcriptional regulator At1D1108_04330 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_04340 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_04350 PF12857 TOBE-like domain At1D1108_04350 PF00005 ABC transporter At1D1108_04370 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1108_04370 PF00107 Zinc-binding dehydrogenase At1D1108_04370 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_04370 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1108_04370 PF16197 Ketoacyl-synthetase C-terminal extension At1D1108_04370 PF00550 Phosphopantetheine attachment site At1D1108_04370 PF00698 Acyl transferase domain At1D1108_04370 PF14765 Polyketide synthase dehydratase At1D1108_04370 PF08659 KR domain At1D1108_04380 PF00563 EAL domain At1D1108_04380 PF01590 GAF domain At1D1108_04380 PF00989 PAS fold At1D1108_04380 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_04400 PF00440 Bacterial regulatory proteins, tetR family At1D1108_04400 PF13977 BetI-type transcriptional repressor, C-terminal At1D1108_04410 PF00171 Aldehyde dehydrogenase family At1D1108_04420 PF00732 GMC oxidoreductase At1D1108_04420 PF05199 GMC oxidoreductase At1D1108_04450 PF00654 Voltage gated chloride channel At1D1108_04510 PF07690 Major Facilitator Superfamily At1D1108_04530 PF04679 ATP dependent DNA ligase C terminal region At1D1108_04530 PF04675 DNA ligase N terminus At1D1108_04530 PF01068 ATP dependent DNA ligase domain At1D1108_04550 PF00403 Heavy-metal-associated domain At1D1108_04560 PF03734 L,D-transpeptidase catalytic domain At1D1108_04560 PF17969 L,D-transpeptidase C-terminal domain At1D1108_04570 PF17969 L,D-transpeptidase C-terminal domain At1D1108_04570 PF03734 L,D-transpeptidase catalytic domain At1D1108_04580 PF01047 MarR family At1D1108_04590 PF02566 OsmC-like protein At1D1108_04620 PF00005 ABC transporter At1D1108_04620 PF16326 ABC transporter C-terminal domain At1D1108_04620 PF12848 ABC transporter At1D1108_04690 PF03466 LysR substrate binding domain At1D1108_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_04700 PF00106 short chain dehydrogenase At1D1108_04720 PF05872 Bacterial protein of unknown function (DUF853) At1D1108_04740 PF01638 HxlR-like helix-turn-helix At1D1108_04750 PF00106 short chain dehydrogenase At1D1108_04770 PF12833 Helix-turn-helix domain At1D1108_04780 PF01810 LysE type translocator At1D1108_04790 PF00248 Aldo/keto reductase family At1D1108_04830 PF01063 Amino-transferase class IV At1D1108_04840 PF00672 HAMP domain At1D1108_04840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_04880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At1D1108_04880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At1D1108_04910 PF01810 LysE type translocator At1D1108_04920 PF01322 Cytochrome C' At1D1108_04930 PF00034 Cytochrome c At1D1108_04990 PF00376 MerR family regulatory protein At1D1108_04990 PF09278 MerR, DNA binding At1D1108_05010 PF02583 Metal-sensitive transcriptional repressor At1D1108_05020 PF01545 Cation efflux family At1D1108_05050 PF00571 CBS domain At1D1108_05050 PF00005 ABC transporter At1D1108_05060 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_05080 PF00326 Prolyl oligopeptidase family At1D1108_05080 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At1D1108_05100 PF00701 Dihydrodipicolinate synthetase family At1D1108_05120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At1D1108_05120 PF02805 Metal binding domain of Ada At1D1108_05120 PF12833 Helix-turn-helix domain At1D1108_05120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At1D1108_05130 PF01594 AI-2E family transporter At1D1108_05140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_05170 PF03006 Haemolysin-III related At1D1108_05190 PF01810 LysE type translocator At1D1108_05200 PF01641 SelR domain At1D1108_05220 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At1D1108_05230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At1D1108_05250 PF01899 Na+/H+ ion antiporter subunit At1D1108_05260 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At1D1108_05270 PF03334 Na+/H+ antiporter subunit At1D1108_05280 PF05443 ROS/MUCR transcriptional regulator protein At1D1108_05310 PF02657 Fe-S metabolism associated domain At1D1108_05320 PF17264 Family of unknown function (DUF5330) At1D1108_05330 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_05330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_05400 PF07687 Peptidase dimerisation domain At1D1108_05400 PF01546 Peptidase family M20/M25/M40 At1D1108_05440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_05450 PF00912 Transglycosylase At1D1108_05450 PF00905 Penicillin binding protein transpeptidase domain At1D1108_05460 PF03692 Putative zinc- or iron-chelating domain At1D1108_05470 PF00905 Penicillin binding protein transpeptidase domain At1D1108_05490 PF09278 MerR, DNA binding At1D1108_05490 PF00376 MerR family regulatory protein At1D1108_05530 PF00251 Glycosyl hydrolases family 32 N-terminal domain At1D1108_05530 PF08244 Glycosyl hydrolases family 32 C terminal At1D1108_05540 PF13426 PAS domain At1D1108_05540 PF08447 PAS fold At1D1108_05540 PF07536 HWE histidine kinase At1D1108_05550 PF02696 Uncharacterized ACR, YdiU/UPF0061 family At1D1108_05570 PF01037 Lrp/AsnC ligand binding domain At1D1108_05570 PF13404 AsnC-type helix-turn-helix domain At1D1108_05660 PF04860 Phage portal protein At1D1108_05840 PF00072 Response regulator receiver domain At1D1108_05840 PF00486 Transcriptional regulatory protein, C terminal At1D1108_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_05850 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_05850 PF08521 Two-component sensor kinase N-terminal At1D1108_05880 PF03100 CcmE At1D1108_05890 PF01578 Cytochrome C assembly protein At1D1108_05890 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal At1D1108_05900 PF03918 Cytochrome C biogenesis protein At1D1108_05910 PF13180 PDZ domain At1D1108_05920 PF00486 Transcriptional regulatory protein, C terminal At1D1108_05920 PF00072 Response regulator receiver domain At1D1108_05930 PF00072 Response regulator receiver domain At1D1108_05930 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_05930 PF08448 PAS fold At1D1108_05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_05930 PF13426 PAS domain At1D1108_05940 PF04134 Protein of unknown function, DUF393 At1D1108_05960 PF03710 Glutamate-ammonia ligase adenylyltransferase At1D1108_05960 PF08335 GlnD PII-uridylyltransferase At1D1108_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_05970 PF00989 PAS fold At1D1108_05970 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_05990 PF17432 Domain of unknown function (DUF3458_C) ARM repeats At1D1108_05990 PF11940 Domain of unknown function (DUF3458) Ig-like fold At1D1108_05990 PF01433 Peptidase family M1 domain At1D1108_06030 PF00012 Hsp70 protein At1D1108_06040 PF03707 Bacterial signalling protein N terminal repeat At1D1108_06040 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_06040 PF00563 EAL domain At1D1108_06100 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_06100 PF00107 Zinc-binding dehydrogenase At1D1108_06110 PF01638 HxlR-like helix-turn-helix At1D1108_06120 PF02673 Bacitracin resistance protein BacA At1D1108_06130 PF01769 Divalent cation transporter At1D1108_06130 PF00571 CBS domain At1D1108_06130 PF03448 MgtE intracellular N domain At1D1108_06140 PF07690 Major Facilitator Superfamily At1D1108_06150 PF00781 Diacylglycerol kinase catalytic domain At1D1108_06160 PF00202 Aminotransferase class-III At1D1108_06180 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus At1D1108_06180 PF01048 Phosphorylase superfamily At1D1108_06240 PF00155 Aminotransferase class I and II At1D1108_06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_06260 PF14759 Reductase C-terminal At1D1108_06270 PF03328 HpcH/HpaI aldolase/citrate lyase family At1D1108_06300 PF02530 Porin subfamily At1D1108_06310 PF02530 Porin subfamily At1D1108_06320 PF01464 Transglycosylase SLT domain At1D1108_06320 PF14718 Soluble lytic murein transglycosylase L domain At1D1108_06330 PF00701 Dihydrodipicolinate synthetase family At1D1108_06340 PF01668 SmpB protein At1D1108_06350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_06350 PF00672 HAMP domain At1D1108_06370 PF01192 RNA polymerase Rpb6 At1D1108_06380 PF13291 ACT domain At1D1108_06380 PF04607 Region found in RelA / SpoT proteins At1D1108_06380 PF02824 TGS domain At1D1108_06410 PF01648 4'-phosphopantetheinyl transferase superfamily At1D1108_06420 PF10502 Signal peptidase, peptidase S26 At1D1108_06430 PF14622 Ribonuclease-III-like At1D1108_06430 PF00035 Double-stranded RNA binding motif At1D1108_06440 PF07650 KH domain At1D1108_06440 PF01926 50S ribosome-binding GTPase At1D1108_06450 PF00027 Cyclic nucleotide-binding domain At1D1108_06450 PF13545 Crp-like helix-turn-helix domain At1D1108_06460 PF00072 Response regulator receiver domain At1D1108_06470 PF02565 Recombination protein O C terminal At1D1108_06470 PF11967 Recombination protein O N terminal At1D1108_06480 PF07690 Major Facilitator Superfamily At1D1108_06490 PF08241 Methyltransferase domain At1D1108_06510 PF01966 HD domain At1D1108_06530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_06550 PF00005 ABC transporter At1D1108_06560 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_06570 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment At1D1108_06580 PF00924 Mechanosensitive ion channel At1D1108_06580 PF05552 Conserved TM helix At1D1108_06600 PF01966 HD domain At1D1108_06610 PF01571 Aminomethyltransferase folate-binding domain At1D1108_06650 PF00293 NUDIX domain At1D1108_06650 PF03099 Biotin/lipoate A/B protein ligase family At1D1108_06660 PF02694 Uncharacterised BCR, YnfA/UPF0060 family At1D1108_06680 PF00072 Response regulator receiver domain At1D1108_06680 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_06700 PF01066 CDP-alcohol phosphatidyltransferase At1D1108_06710 PF02666 Phosphatidylserine decarboxylase At1D1108_06720 PF00005 ABC transporter At1D1108_06720 PF00664 ABC transporter transmembrane region At1D1108_06740 PF03641 Possible lysine decarboxylase At1D1108_06750 PF03717 Penicillin-binding Protein dimerisation domain At1D1108_06750 PF00905 Penicillin binding protein transpeptidase domain At1D1108_06760 PF00892 EamA-like transporter family At1D1108_06770 PF00561 alpha/beta hydrolase fold At1D1108_06810 PF04480 Protein of unknown function (DUF559) At1D1108_06820 PF09190 DALR domain At1D1108_06820 PF01406 tRNA synthetases class I (C) catalytic domain At1D1108_06830 PF00106 short chain dehydrogenase At1D1108_06840 PF13537 Glutamine amidotransferase domain At1D1108_06840 PF00156 Phosphoribosyl transferase domain At1D1108_06850 PF02674 Colicin V production protein At1D1108_06860 PF18073 Rubredoxin metal binding domain At1D1108_06860 PF06745 KaiC At1D1108_06890 PF01168 Alanine racemase, N-terminal domain At1D1108_06890 PF00842 Alanine racemase, C-terminal domain At1D1108_06900 PF12852 Cupin At1D1108_06900 PF12833 Helix-turn-helix domain At1D1108_06910 PF03591 AzlC protein At1D1108_06930 PF03796 DnaB-like helicase C terminal domain At1D1108_06930 PF00772 DnaB-like helicase N terminal domain At1D1108_06940 PF01047 MarR family At1D1108_06960 PF13533 Biotin-lipoyl like At1D1108_06970 PF03948 Ribosomal protein L9, C-terminal domain At1D1108_06970 PF01281 Ribosomal protein L9, N-terminal domain At1D1108_06990 PF01084 Ribosomal protein S18 At1D1108_07000 PF01250 Ribosomal protein S6 At1D1108_07010 PF00248 Aldo/keto reductase family At1D1108_07020 PF00698 Acyl transferase domain At1D1108_07040 PF00550 Phosphopantetheine attachment site At1D1108_07050 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1108_07050 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1108_07060 PF02618 YceG-like family At1D1108_07070 PF08340 Domain of unknown function (DUF1732) At1D1108_07070 PF03755 YicC-like family, N-terminal region At1D1108_07080 PF00625 Guanylate kinase At1D1108_07100 PF00398 Ribosomal RNA adenine dimethylase At1D1108_07110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At1D1108_07130 PF04453 LPS transport system D At1D1108_07130 PF03968 OstA-like protein At1D1108_07160 PF02789 Cytosol aminopeptidase family, N-terminal domain At1D1108_07160 PF00883 Cytosol aminopeptidase family, catalytic domain At1D1108_07180 PF00563 EAL domain At1D1108_07180 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_07180 PF03707 Bacterial signalling protein N terminal repeat At1D1108_07190 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_07200 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_07200 PF13185 GAF domain At1D1108_07200 PF00563 EAL domain At1D1108_07210 PF12848 ABC transporter At1D1108_07210 PF00005 ABC transporter At1D1108_07220 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_07220 PF17158 Membrane-associated sensor, integral membrane domain At1D1108_07230 PF13417 Glutathione S-transferase, N-terminal domain At1D1108_07240 PF00334 Nucleoside diphosphate kinase At1D1108_07290 PF02391 MoaE protein At1D1108_07310 PF01066 CDP-alcohol phosphatidyltransferase At1D1108_07320 PF01541 GIY-YIG catalytic domain At1D1108_07320 PF02151 UvrB/uvrC motif At1D1108_07320 PF08459 UvrC Helix-hairpin-helix N-terminal At1D1108_07340 PF13505 Outer membrane protein beta-barrel domain At1D1108_07350 PF00043 Glutathione S-transferase, C-terminal domain At1D1108_07350 PF13417 Glutathione S-transferase, N-terminal domain At1D1108_07360 PF00445 Ribonuclease T2 family At1D1108_07380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ At1D1108_07390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1108_07390 PF00384 Molybdopterin oxidoreductase At1D1108_07390 PF01568 Molydopterin dinucleotide binding domain At1D1108_07400 PF00293 NUDIX domain At1D1108_07430 PF00551 Formyl transferase At1D1108_07440 PF00586 AIR synthase related protein, N-terminal domain At1D1108_07440 PF02769 AIR synthase related protein, C-terminal domain At1D1108_07450 PF01594 AI-2E family transporter At1D1108_07470 PF17941 Polyphosphate kinase C-terminal domain 1 At1D1108_07470 PF02503 Polyphosphate kinase middle domain At1D1108_07470 PF13089 Polyphosphate kinase N-terminal domain At1D1108_07470 PF13090 Polyphosphate kinase C-terminal domain 2 At1D1108_07480 PF02541 Ppx/GppA phosphatase family At1D1108_07490 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_07530 PF00211 Adenylate and Guanylate cyclase catalytic domain At1D1108_07550 PF01612 3'-5' exonuclease At1D1108_07550 PF00570 HRDC domain At1D1108_07560 PF07690 Major Facilitator Superfamily At1D1108_07570 PF01336 OB-fold nucleic acid binding domain At1D1108_07570 PF00152 tRNA synthetases class II (D, K and N) At1D1108_07570 PF02938 GAD domain At1D1108_07580 PF06123 Inner membrane protein CreD At1D1108_07590 PF00916 Sulfate permease family At1D1108_07590 PF01740 STAS domain At1D1108_07610 PF00521 DNA gyrase/topoisomerase IV, subunit A At1D1108_07610 PF03989 DNA gyrase C-terminal domain, beta-propeller At1D1108_07630 PF04376 Arginine-tRNA-protein transferase, N terminus At1D1108_07630 PF04377 Arginine-tRNA-protein transferase, C terminus At1D1108_07650 PF00490 Delta-aminolevulinic acid dehydratase At1D1108_07690 PF00464 Serine hydroxymethyltransferase At1D1108_07700 PF03477 ATP cone domain At1D1108_07710 PF01872 RibD C-terminal domain At1D1108_07710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At1D1108_07720 PF00677 Lumazine binding domain At1D1108_07730 PF01810 LysE type translocator At1D1108_07740 PF00885 6,7-dimethyl-8-ribityllumazine synthase At1D1108_07750 PF01029 NusB family At1D1108_07760 PF07690 Major Facilitator Superfamily At1D1108_07770 PF03030 Inorganic H+ pyrophosphatase At1D1108_07810 PF02504 Fatty acid synthesis protein At1D1108_07820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At1D1108_07820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At1D1108_07830 PF00216 Bacterial DNA-binding protein At1D1108_07840 PF13411 MerR HTH family regulatory protein At1D1108_07870 PF00403 Heavy-metal-associated domain At1D1108_07880 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1108_07880 PF00970 Oxidoreductase FAD-binding domain At1D1108_07880 PF00175 Oxidoreductase NAD-binding domain At1D1108_07890 PF00376 MerR family regulatory protein At1D1108_07890 PF09278 MerR, DNA binding At1D1108_07900 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_07910 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_07910 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_07920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_07920 PF00005 ABC transporter At1D1108_07930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_07930 PF00005 ABC transporter At1D1108_07940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_07960 PF02386 Cation transport protein At1D1108_07970 PF00585 C-terminal regulatory domain of Threonine dehydratase At1D1108_07970 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_07990 PF00072 Response regulator receiver domain At1D1108_07990 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_08000 PF02525 Flavodoxin-like fold At1D1108_08010 PF03466 LysR substrate binding domain At1D1108_08010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_08030 PF02872 5'-nucleotidase, C-terminal domain At1D1108_08030 PF00149 Calcineurin-like phosphoesterase At1D1108_08080 PF00581 Rhodanese-like domain At1D1108_08090 PF02272 DHHA1 domain At1D1108_08090 PF01411 tRNA synthetases class II (A) At1D1108_08090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At1D1108_08100 PF00571 CBS domain At1D1108_08100 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_08120 PF03441 FAD binding domain of DNA photolyase At1D1108_08120 PF00875 DNA photolyase At1D1108_08140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At1D1108_08140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At1D1108_08190 PF06055 Exopolysaccharide synthesis, ExoD At1D1108_08210 PF09335 SNARE associated Golgi protein At1D1108_08240 PF01032 FecCD transport family At1D1108_08250 PF00005 ABC transporter At1D1108_08260 PF00005 ABC transporter At1D1108_08270 PF00127 Copper binding proteins, plastocyanin/azurin family At1D1108_08280 PF00210 Ferritin-like domain At1D1108_08350 PF02397 Bacterial sugar transferase At1D1108_08360 PF00534 Glycosyl transferases group 1 At1D1108_08410 PF02628 Cytochrome oxidase assembly protein At1D1108_08420 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase At1D1108_08430 PF01118 Semialdehyde dehydrogenase, NAD binding domain At1D1108_08440 PF00491 Arginase family At1D1108_08450 PF00380 Ribosomal protein S9/S16 At1D1108_08460 PF00572 Ribosomal protein L13 At1D1108_08480 PF13380 CoA binding domain At1D1108_08490 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1108_08510 PF00067 Cytochrome P450 At1D1108_08520 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_08530 PF00574 Clp protease At1D1108_08540 PF06689 ClpX C4-type zinc finger At1D1108_08540 PF07724 AAA domain (Cdc48 subfamily) At1D1108_08540 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1108_08550 PF05362 Lon protease (S16) C-terminal proteolytic domain At1D1108_08550 PF02190 ATP-dependent protease La (LON) substrate-binding domain At1D1108_08550 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_08560 PF00216 Bacterial DNA-binding protein At1D1108_08570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At1D1108_08590 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 At1D1108_08600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit At1D1108_08610 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit At1D1108_08630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit At1D1108_08660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At1D1108_08660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At1D1108_08660 PF10531 SLBB domain At1D1108_08670 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal At1D1108_08670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At1D1108_08670 PF00384 Molybdopterin oxidoreductase At1D1108_08680 PF00146 NADH dehydrogenase At1D1108_08690 PF12838 4Fe-4S dicluster domain At1D1108_08700 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 At1D1108_08710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At1D1108_08720 PF00361 Proton-conducting membrane transporter At1D1108_08720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At1D1108_08730 PF00361 Proton-conducting membrane transporter At1D1108_08730 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus At1D1108_08740 PF00361 Proton-conducting membrane transporter At1D1108_08750 PF02237 Biotin protein ligase C terminal domain At1D1108_08750 PF08279 HTH domain At1D1108_08750 PF03099 Biotin/lipoate A/B protein ligase family At1D1108_08760 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain At1D1108_08760 PF12706 Beta-lactamase superfamily domain At1D1108_08760 PF17770 Ribonuclease J C-terminal domain At1D1108_08780 PF03129 Anticodon binding domain At1D1108_08780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At1D1108_08790 PF12704 MacB-like periplasmic core domain At1D1108_08790 PF02687 FtsX-like permease family At1D1108_08800 PF00005 ABC transporter At1D1108_08810 PF02811 PHP domain At1D1108_08810 PF14579 Helix-hairpin-helix motif At1D1108_08810 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1108_08810 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1108_08830 PF00817 impB/mucB/samB family At1D1108_08830 PF11799 impB/mucB/samB family C-terminal domain At1D1108_08850 PF00072 Response regulator receiver domain At1D1108_08860 PF00072 Response regulator receiver domain At1D1108_08860 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_08870 PF00471 Ribosomal protein L33 At1D1108_08880 PF07690 Major Facilitator Superfamily At1D1108_08910 PF00773 RNB domain At1D1108_08910 PF08206 Ribonuclease B OB domain At1D1108_08910 PF17876 Cold shock domain At1D1108_08910 PF00575 S1 RNA binding domain At1D1108_08910 PF08461 Ribonuclease R winged-helix domain At1D1108_08920 PF13368 Topoisomerase C-terminal repeat At1D1108_08920 PF01131 DNA topoisomerase At1D1108_08920 PF01751 Toprim domain At1D1108_08920 PF01396 Topoisomerase DNA binding C4 zinc finger At1D1108_08940 PF02481 DNA recombination-mediator protein A At1D1108_08940 PF17782 DprA winged helix domain At1D1108_08950 PF02660 Glycerol-3-phosphate acyltransferase At1D1108_08960 PF01979 Amidohydrolase family At1D1108_08970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At1D1108_08970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At1D1108_08980 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_08980 PF18158 Adaptive response protein AidB N-terminal domain At1D1108_08980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_08990 PF00583 Acetyltransferase (GNAT) family At1D1108_09030 PF03652 Holliday junction resolvase At1D1108_09040 PF08274 PhnA Zinc-Ribbon At1D1108_09040 PF03831 PhnA domain At1D1108_09060 PF02686 Glu-tRNAGln amidotransferase C subunit At1D1108_09070 PF01425 Amidase At1D1108_09080 PF09857 Putative toxin of bacterial toxin-antitoxin pair At1D1108_09090 PF00583 Acetyltransferase (GNAT) family At1D1108_09110 PF02637 GatB domain At1D1108_09110 PF02934 GatB/GatE catalytic domain At1D1108_09130 PF00583 Acetyltransferase (GNAT) family At1D1108_09160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase At1D1108_09170 PF02785 Biotin carboxylase C-terminal domain At1D1108_09170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_09170 PF00289 Biotin carboxylase, N-terminal domain At1D1108_09180 PF00364 Biotin-requiring enzyme At1D1108_09190 PF01220 Dehydroquinase class II At1D1108_09200 PF13462 Thioredoxin At1D1108_09200 PF06965 Na+/H+ antiporter 1 At1D1108_09210 PF00155 Aminotransferase class I and II At1D1108_09260 PF10150 Ribonuclease E/G family At1D1108_09260 PF12111 Polyribonucleotide phosphorylase C terminal At1D1108_09260 PF00575 S1 RNA binding domain At1D1108_09280 PF01520 N-acetylmuramoyl-L-alanine amidase At1D1108_09290 PF17092 Penicillin-binding protein OB-like domain At1D1108_09290 PF00912 Transglycosylase At1D1108_09290 PF00905 Penicillin binding protein transpeptidase domain At1D1108_09300 PF00472 RF-1 domain At1D1108_09300 PF03462 PCRF domain At1D1108_09330 PF01513 ATP-NAD kinase At1D1108_09340 PF02567 Phenazine biosynthesis-like protein At1D1108_09380 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1108_09400 PF00809 Pterin binding enzyme At1D1108_09410 PF02152 Dihydroneopterin aldolase At1D1108_09420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) At1D1108_09440 PF05128 Domain of unknown function (DUF697) At1D1108_09450 PF04317 YcjX-like family, DUF463 At1D1108_09470 PF01258 Prokaryotic dksA/traR C4-type zinc finger At1D1108_09500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_09500 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_09500 PF08448 PAS fold At1D1108_09500 PF00072 Response regulator receiver domain At1D1108_09500 PF13188 PAS domain At1D1108_09520 PF02617 ATP-dependent Clp protease adaptor protein ClpS At1D1108_09530 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1108_09530 PF02861 Clp amino terminal domain, pathogenicity island component At1D1108_09530 PF17871 AAA lid domain At1D1108_09530 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_09530 PF07724 AAA domain (Cdc48 subfamily) At1D1108_09590 PF01230 HIT domain At1D1108_09650 PF00318 Ribosomal protein S2 At1D1108_09660 PF00889 Elongation factor TS At1D1108_09670 PF00696 Amino acid kinase family At1D1108_09680 PF01765 Ribosome recycling factor At1D1108_09690 PF01255 Putative undecaprenyl diphosphate synthase At1D1108_09710 PF17820 PDZ domain At1D1108_09710 PF02163 Peptidase family M50 At1D1108_09720 PF01103 Surface antigen At1D1108_09720 PF07244 Surface antigen variable number repeat At1D1108_09730 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD At1D1108_09730 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_09740 PF07977 FabA-like domain At1D1108_09750 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_09750 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 At1D1108_09760 PF06230 LpxI C-terminal domain At1D1108_09760 PF17930 LpxI N-terminal domain At1D1108_09770 PF02684 Lipid-A-disaccharide synthetase At1D1108_09780 PF00285 Citrate synthase, C-terminal domain At1D1108_09810 PF01726 LexA DNA binding domain At1D1108_09810 PF00717 Peptidase S24-like At1D1108_09830 PF00793 DAHP synthetase I family At1D1108_09840 PF03952 Enolase, N-terminal domain At1D1108_09840 PF00113 Enolase, C-terminal TIM barrel domain At1D1108_09860 PF00676 Dehydrogenase E1 component At1D1108_09870 PF02780 Transketolase, C-terminal domain At1D1108_09870 PF02779 Transketolase, pyrimidine binding domain At1D1108_09870 PF00364 Biotin-requiring enzyme At1D1108_09880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At1D1108_09880 PF00364 Biotin-requiring enzyme At1D1108_09880 PF02817 e3 binding domain At1D1108_09900 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_09900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1108_09920 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At1D1108_09920 PF04055 Radical SAM superfamily At1D1108_09930 PF00892 EamA-like transporter family At1D1108_09970 PF03364 Polyketide cyclase / dehydrase and lipid transport At1D1108_09980 PF02464 Competence-damaged protein At1D1108_09990 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase At1D1108_09990 PF02542 YgbB family At1D1108_10000 PF01207 Dihydrouridine synthase (Dus) At1D1108_10010 PF00989 PAS fold At1D1108_10010 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_10020 PF02954 Bacterial regulatory protein, Fis family At1D1108_10020 PF00072 Response regulator receiver domain At1D1108_10020 PF00158 Sigma-54 interaction domain At1D1108_10030 PF00989 PAS fold At1D1108_10030 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_10030 PF00672 HAMP domain At1D1108_10040 PF00158 Sigma-54 interaction domain At1D1108_10040 PF00072 Response regulator receiver domain At1D1108_10040 PF02954 Bacterial regulatory protein, Fis family At1D1108_10050 PF02080 TrkA-C domain At1D1108_10050 PF02254 TrkA-N domain At1D1108_10060 PF17209 Hfq protein At1D1108_10070 PF01926 50S ribosome-binding GTPase At1D1108_10070 PF16360 GTP-binding GTPase Middle Region At1D1108_10070 PF13167 GTP-binding GTPase N-terminal At1D1108_10080 PF03819 MazG nucleotide pyrophosphohydrolase domain At1D1108_10100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_10100 PF14824 Sirohaem biosynthesis protein central At1D1108_10100 PF10414 Sirohaem synthase dimerisation region At1D1108_10140 PF00175 Oxidoreductase NAD-binding domain At1D1108_10140 PF00970 Oxidoreductase FAD-binding domain At1D1108_10150 PF07690 Major Facilitator Superfamily At1D1108_10180 PF02347 Glycine cleavage system P-protein At1D1108_10190 PF01597 Glycine cleavage H-protein At1D1108_10200 PF01571 Aminomethyltransferase folate-binding domain At1D1108_10200 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1108_10260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) At1D1108_10270 PF01479 S4 domain At1D1108_10270 PF00849 RNA pseudouridylate synthase At1D1108_10280 PF13419 Haloacid dehalogenase-like hydrolase At1D1108_10320 PF00756 Putative esterase At1D1108_10340 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 At1D1108_10360 PF10417 C-terminal domain of 1-Cys peroxiredoxin At1D1108_10360 PF00578 AhpC/TSA family At1D1108_10410 PF04542 Sigma-70 region 2 At1D1108_10410 PF08281 Sigma-70, region 4 At1D1108_10450 PF03466 LysR substrate binding domain At1D1108_10450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_10460 PF04303 PrpF protein At1D1108_10480 PF00005 ABC transporter At1D1108_10490 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_10500 PF13426 PAS domain At1D1108_10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_10500 PF00072 Response regulator receiver domain At1D1108_10510 PF00072 Response regulator receiver domain At1D1108_10520 PF07536 HWE histidine kinase At1D1108_10520 PF08447 PAS fold At1D1108_10520 PF13426 PAS domain At1D1108_10530 PF00072 Response regulator receiver domain At1D1108_10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_10530 PF13426 PAS domain At1D1108_10550 PF00034 Cytochrome c At1D1108_10570 PF00732 GMC oxidoreductase At1D1108_10570 PF05199 GMC oxidoreductase At1D1108_10590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_10590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_10610 PF00356 Bacterial regulatory proteins, lacI family At1D1108_10620 PF02653 Branched-chain amino acid transport system / permease component At1D1108_10630 PF02653 Branched-chain amino acid transport system / permease component At1D1108_10640 PF00005 ABC transporter At1D1108_10650 PF13407 Periplasmic binding protein domain At1D1108_10660 PF00075 RNase H At1D1108_10680 PF13649 Methyltransferase domain At1D1108_10690 PF00654 Voltage gated chloride channel At1D1108_10700 PF12706 Beta-lactamase superfamily domain At1D1108_10700 PF03099 Biotin/lipoate A/B protein ligase family At1D1108_10710 PF01026 TatD related DNase At1D1108_10720 PF08264 Anticodon-binding domain of tRNA At1D1108_10720 PF09334 tRNA synthetases class I (M) At1D1108_10730 PF09115 DNA polymerase III, delta subunit, C terminal At1D1108_10740 PF02223 Thymidylate kinase At1D1108_10750 PF07943 Penicillin-binding protein 5, C-terminal domain At1D1108_10750 PF00768 D-alanyl-D-alanine carboxypeptidase At1D1108_10760 PF03330 Lytic transglycolase At1D1108_10760 PF05036 Sporulation related domain At1D1108_10830 PF00521 DNA gyrase/topoisomerase IV, subunit A At1D1108_10830 PF03989 DNA gyrase C-terminal domain, beta-propeller At1D1108_10840 PF01914 MarC family integral membrane protein At1D1108_10860 PF00436 Single-strand binding protein family At1D1108_10870 PF17755 UvrA DNA-binding domain At1D1108_10870 PF17760 UvrA interaction domain At1D1108_10890 PF01207 Dihydrouridine synthase (Dus) At1D1108_10900 PF01557 Fumarylacetoacetate (FAA) hydrolase family At1D1108_10910 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_10930 PF00950 ABC 3 transport family At1D1108_10940 PF00005 ABC transporter At1D1108_10950 PF01297 Zinc-uptake complex component A periplasmic At1D1108_10980 PF00248 Aldo/keto reductase family At1D1108_11000 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At1D1108_11000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_11010 PF03597 Cytochrome oxidase maturation protein cbb3-type At1D1108_11030 PF05751 FixH At1D1108_11040 PF13746 4Fe-4S dicluster domain At1D1108_11040 PF12801 4Fe-4S binding domain At1D1108_11040 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase At1D1108_11070 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP At1D1108_11070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III At1D1108_11100 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1108_11110 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase At1D1108_11140 PF00376 MerR family regulatory protein At1D1108_11140 PF09278 MerR, DNA binding At1D1108_11150 PF01769 Divalent cation transporter At1D1108_11150 PF03448 MgtE intracellular N domain At1D1108_11150 PF00571 CBS domain At1D1108_11160 PF00384 Molybdopterin oxidoreductase At1D1108_11180 PF01327 Polypeptide deformylase At1D1108_11230 PF03099 Biotin/lipoate A/B protein ligase family At1D1108_11240 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_11240 PF00107 Zinc-binding dehydrogenase At1D1108_11290 PF02355 Protein export membrane protein At1D1108_11290 PF07549 SecD/SecF GG Motif At1D1108_11300 PF02699 Preprotein translocase subunit At1D1108_11320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At1D1108_11320 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_11340 PF00067 Cytochrome P450 At1D1108_11360 PF06426 Serine acetyltransferase, N-terminal At1D1108_11360 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_11370 PF00561 alpha/beta hydrolase fold At1D1108_11390 PF01494 FAD binding domain At1D1108_11400 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1108_11410 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_11420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_11430 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_11440 PF00005 ABC transporter At1D1108_11450 PF01368 DHH family At1D1108_11450 PF02272 DHHA1 domain At1D1108_11450 PF17768 RecJ OB domain At1D1108_11470 PF03447 Homoserine dehydrogenase, NAD binding domain At1D1108_11470 PF01842 ACT domain At1D1108_11470 PF00742 Homoserine dehydrogenase At1D1108_11480 PF00155 Aminotransferase class I and II At1D1108_11490 PF01156 Inosine-uridine preferring nucleoside hydrolase At1D1108_11500 PF01925 Sulfite exporter TauE/SafE At1D1108_11530 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_11530 PF00107 Zinc-binding dehydrogenase At1D1108_11540 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1108_11540 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1108_11560 PF07977 FabA-like domain At1D1108_11570 PF00550 Phosphopantetheine attachment site At1D1108_11580 PF04055 Radical SAM superfamily At1D1108_11590 PF13545 Crp-like helix-turn-helix domain At1D1108_11590 PF00027 Cyclic nucleotide-binding domain At1D1108_11610 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus At1D1108_11620 PF17746 SfsA N-terminal OB domain At1D1108_11620 PF03749 Sugar fermentation stimulation protein RE domain At1D1108_11630 PF00557 Metallopeptidase family M24 At1D1108_11640 PF04002 RadC-like JAB domain At1D1108_11670 PF01474 Class-II DAHP synthetase family At1D1108_11680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1108_11680 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_11700 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At1D1108_11710 PF13419 Haloacid dehalogenase-like hydrolase At1D1108_11740 PF10415 Fumarase C C-terminus At1D1108_11740 PF00206 Lyase At1D1108_11760 PF00117 Glutamine amidotransferase class-I At1D1108_11760 PF06418 CTP synthase N-terminus At1D1108_11770 PF03840 Preprotein translocase SecG subunit At1D1108_11780 PF00121 Triosephosphate isomerase At1D1108_11800 PF00204 DNA gyrase B At1D1108_11800 PF00986 DNA gyrase B subunit, carboxyl terminus At1D1108_11800 PF01751 Toprim domain At1D1108_11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_11810 PF00574 Clp protease At1D1108_11830 PF01022 Bacterial regulatory protein, arsR family At1D1108_11840 PF13091 PLD-like domain At1D1108_11860 PF01266 FAD dependent oxidoreductase At1D1108_11860 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1108_11860 PF01571 Aminomethyltransferase folate-binding domain At1D1108_11860 PF16350 FAD dependent oxidoreductase central domain At1D1108_11890 PF00924 Mechanosensitive ion channel At1D1108_11890 PF12795 Mechanosensitive ion channel porin domain At1D1108_11890 PF12794 Mechanosensitive ion channel inner membrane domain 1 At1D1108_11970 PF01527 Transposase At1D1108_11980 PF05717 IS66 Orf2 like protein At1D1108_11990 PF03050 Transposase IS66 family At1D1108_11990 PF13817 IS66 C-terminal element At1D1108_11990 PF13007 Transposase C of IS166 homeodomain At1D1108_11990 PF13005 zinc-finger binding domain of transposase IS66 At1D1108_12000 PF01435 Peptidase family M48 At1D1108_12010 PF02534 Type IV secretory system Conjugative DNA transfer At1D1108_12060 PF12833 Helix-turn-helix domain At1D1108_12070 PF13426 PAS domain At1D1108_12070 PF08447 PAS fold At1D1108_12070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_12100 PF02743 Cache domain At1D1108_12100 PF00672 HAMP domain At1D1108_12100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_12120 PF02796 Helix-turn-helix domain of resolvase At1D1108_12120 PF00239 Resolvase, N terminal domain At1D1108_12220 PF02195 ParB-like nuclease domain At1D1108_12220 PF17762 HTH domain found in ParB protein At1D1108_12340 PF00005 ABC transporter At1D1108_12350 PF02405 Permease MlaE At1D1108_12360 PF13378 Enolase C-terminal domain-like At1D1108_12360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_12380 PF03949 Malic enzyme, NAD binding domain At1D1108_12380 PF00390 Malic enzyme, N-terminal domain At1D1108_12380 PF01515 Phosphate acetyl/butaryl transferase At1D1108_12400 PF00881 Nitroreductase family At1D1108_12410 PF07676 WD40-like Beta Propeller Repeat At1D1108_12430 PF02540 NAD synthase At1D1108_12430 PF00795 Carbon-nitrogen hydrolase At1D1108_12440 PF00884 Sulfatase At1D1108_12460 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_12460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1108_12500 PF05697 Bacterial trigger factor protein (TF) At1D1108_12500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase At1D1108_12500 PF05698 Bacterial trigger factor protein (TF) C-terminus At1D1108_12540 PF01134 Glucose inhibited division protein A At1D1108_12580 PF00107 Zinc-binding dehydrogenase At1D1108_12580 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_12600 PF00550 Phosphopantetheine attachment site At1D1108_12610 PF00501 AMP-binding enzyme At1D1108_12610 PF00550 Phosphopantetheine attachment site At1D1108_12610 PF00975 Thioesterase domain At1D1108_12610 PF00668 Condensation domain At1D1108_12610 PF13193 AMP-binding enzyme C-terminal domain At1D1108_12620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At1D1108_12620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1108_12630 PF00117 Glutamine amidotransferase class-I At1D1108_12630 PF04715 Anthranilate synthase component I, N terminal region At1D1108_12630 PF00425 chorismate binding enzyme At1D1108_12640 PF01702 Queuine tRNA-ribosyltransferase At1D1108_12650 PF02547 Queuosine biosynthesis protein At1D1108_12660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At1D1108_12670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At1D1108_12680 PF01467 Cytidylyltransferase-like At1D1108_12720 PF02885 Glycosyl transferase family, helical bundle domain At1D1108_12720 PF00591 Glycosyl transferase family, a/b domain At1D1108_12730 PF00218 Indole-3-glycerol phosphate synthase At1D1108_12740 PF01967 MoaC family At1D1108_12750 PF03453 MoeA N-terminal region (domain I and II) At1D1108_12750 PF03454 MoeA C-terminal region (domain IV) At1D1108_12750 PF00994 Probable molybdopterin binding domain At1D1108_12760 PF17158 Membrane-associated sensor, integral membrane domain At1D1108_12760 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_12780 PF00999 Sodium/hydrogen exchanger family At1D1108_12780 PF02254 TrkA-N domain At1D1108_12800 PF06463 Molybdenum Cofactor Synthesis C At1D1108_12800 PF04055 Radical SAM superfamily At1D1108_12810 PF00892 EamA-like transporter family At1D1108_12820 PF07690 Major Facilitator Superfamily At1D1108_12830 PF12804 MobA-like NTP transferase domain At1D1108_12840 PF03205 Molybdopterin guanine dinucleotide synthesis protein B At1D1108_12850 PF01551 Peptidase family M23 At1D1108_12870 PF01975 Survival protein SurE At1D1108_12880 PF02403 Seryl-tRNA synthetase N-terminal domain At1D1108_12880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At1D1108_12890 PF00902 Sec-independent protein translocase protein (TatC) At1D1108_12900 PF02416 mttA/Hcf106 family At1D1108_12910 PF02416 mttA/Hcf106 family At1D1108_12920 PF04079 Segregation and condensation complex subunit ScpB At1D1108_12930 PF02616 Segregation and condensation protein ScpA At1D1108_12940 PF00933 Glycosyl hydrolase family 3 N terminal domain At1D1108_12960 PF03485 Arginyl tRNA synthetase N terminal domain At1D1108_12960 PF00750 tRNA synthetases class I (R) At1D1108_12960 PF05746 DALR anticodon binding domain At1D1108_12970 PF13286 Phosphohydrolase-associated domain At1D1108_12970 PF01966 HD domain At1D1108_12980 PF01521 Iron-sulphur cluster biosynthesis At1D1108_13000 PF08238 Sel1 repeat At1D1108_13010 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) At1D1108_13020 PF10458 Valyl tRNA synthetase tRNA binding arm At1D1108_13020 PF00133 tRNA synthetases class I (I, L, M and V) At1D1108_13020 PF08264 Anticodon-binding domain of tRNA At1D1108_13110 PF03358 NADPH-dependent FMN reductase At1D1108_13120 PF18146 Damage-inducible protein CinA KH domain At1D1108_13120 PF00994 Probable molybdopterin binding domain At1D1108_13120 PF02464 Competence-damaged protein At1D1108_13130 PF00582 Universal stress protein family At1D1108_13140 PF00156 Phosphoribosyl transferase domain At1D1108_13150 PF02867 Ribonucleotide reductase, barrel domain At1D1108_13150 PF08471 Class II vitamin B12-dependent ribonucleotide reductase At1D1108_13170 PF01566 Natural resistance-associated macrophage protein At1D1108_13190 PF00664 ABC transporter transmembrane region At1D1108_13190 PF00005 ABC transporter At1D1108_13200 PF01594 AI-2E family transporter At1D1108_13210 PF00583 Acetyltransferase (GNAT) family At1D1108_13270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At1D1108_13270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At1D1108_13270 PF02824 TGS domain At1D1108_13270 PF03129 Anticodon binding domain At1D1108_13290 PF01809 Putative membrane protein insertion efficiency factor At1D1108_13310 PF01227 GTP cyclohydrolase I At1D1108_13320 PF01502 Phosphoribosyl-AMP cyclohydrolase At1D1108_13330 PF01734 Patatin-like phospholipase At1D1108_13340 PF00571 CBS domain At1D1108_13340 PF00478 IMP dehydrogenase / GMP reductase domain At1D1108_13400 PF03313 Serine dehydratase alpha chain At1D1108_13400 PF03315 Serine dehydratase beta chain At1D1108_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_13470 PF03466 LysR substrate binding domain At1D1108_13490 PF01965 DJ-1/PfpI family At1D1108_13490 PF12833 Helix-turn-helix domain At1D1108_13500 PF03853 YjeF-related protein N-terminus At1D1108_13500 PF01256 Carbohydrate kinase At1D1108_13510 PF00543 Nitrogen regulatory protein P-II At1D1108_13520 PF03951 Glutamine synthetase, beta-Grasp domain At1D1108_13520 PF00120 Glutamine synthetase, catalytic domain At1D1108_13540 PF08755 Hemimethylated DNA-binding protein YccV like At1D1108_13560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_13580 PF00892 EamA-like transporter family At1D1108_13600 PF03461 TRCF domain At1D1108_13600 PF00270 DEAD/DEAH box helicase At1D1108_13600 PF02559 CarD-like/TRCF domain At1D1108_13600 PF17757 UvrB interaction domain At1D1108_13600 PF00271 Helicase conserved C-terminal domain At1D1108_13620 PF00270 DEAD/DEAH box helicase At1D1108_13620 PF00271 Helicase conserved C-terminal domain At1D1108_13620 PF17191 RecG wedge domain At1D1108_13650 PF01850 PIN domain At1D1108_13680 PF01380 SIS domain At1D1108_13690 PF12804 MobA-like NTP transferase domain At1D1108_13690 PF14602 Hexapeptide repeat of succinyl-transferase At1D1108_13690 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_13700 PF07729 FCD domain At1D1108_13700 PF00392 Bacterial regulatory proteins, gntR family At1D1108_13710 PF02608 ABC transporter substrate-binding protein PnrA-like At1D1108_13740 PF00005 ABC transporter At1D1108_13760 PF01494 FAD binding domain At1D1108_13770 PF03547 Membrane transport protein At1D1108_13780 PF02683 Cytochrome C biogenesis protein transmembrane region At1D1108_13800 PF12900 Pyridoxamine 5'-phosphate oxidase At1D1108_13830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_13840 PF00313 'Cold-shock' DNA-binding domain At1D1108_13930 PF02687 FtsX-like permease family At1D1108_13930 PF12704 MacB-like periplasmic core domain At1D1108_13930 PF00005 ABC transporter At1D1108_13940 PF00005 ABC transporter At1D1108_13940 PF02687 FtsX-like permease family At1D1108_13940 PF12704 MacB-like periplasmic core domain At1D1108_13960 PF01521 Iron-sulphur cluster biosynthesis At1D1108_13970 PF01883 Iron-sulfur cluster assembly protein At1D1108_13980 PF00266 Aminotransferase class-V At1D1108_13990 PF01458 Uncharacterized protein family (UPF0051) At1D1108_14000 PF00005 ABC transporter At1D1108_14010 PF01458 Uncharacterized protein family (UPF0051) At1D1108_14020 PF00266 Aminotransferase class-V At1D1108_14030 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At1D1108_14040 PF03702 Anhydro-N-acetylmuramic acid kinase At1D1108_14050 PF00579 tRNA synthetases class I (W and Y) At1D1108_14070 PF00578 AhpC/TSA family At1D1108_14080 PF04305 Protein of unknown function (DUF455) At1D1108_14090 PF08525 Opacity-associated protein A N-terminal motif At1D1108_14090 PF01551 Peptidase family M23 At1D1108_14090 PF01476 LysM domain At1D1108_14100 PF00271 Helicase conserved C-terminal domain At1D1108_14100 PF00270 DEAD/DEAH box helicase At1D1108_14130 PF00834 Ribulose-phosphate 3 epimerase family At1D1108_14150 PF10397 Adenylosuccinate lyase C-terminus At1D1108_14150 PF00206 Lyase At1D1108_14170 PF01259 SAICAR synthetase At1D1108_14180 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase At1D1108_14220 PF00392 Bacterial regulatory proteins, gntR family At1D1108_14220 PF00155 Aminotransferase class I and II At1D1108_14240 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain At1D1108_14240 PF00586 AIR synthase related protein, N-terminal domain At1D1108_14240 PF02769 AIR synthase related protein, C-terminal domain At1D1108_14280 PF00462 Glutaredoxin At1D1108_14290 PF07690 Major Facilitator Superfamily At1D1108_14300 PF00459 Inositol monophosphatase family At1D1108_14310 PF00459 Inositol monophosphatase family At1D1108_14320 PF01171 PP-loop family At1D1108_14330 PF04960 Glutaminase At1D1108_14340 PF00163 Ribosomal protein S4/S9 N-terminal domain At1D1108_14340 PF01479 S4 domain At1D1108_14350 PF03741 Integral membrane protein TerC family At1D1108_14380 PF00892 EamA-like transporter family At1D1108_14390 PF01810 LysE type translocator At1D1108_14420 PF01177 Asp/Glu/Hydantoin racemase At1D1108_14430 PF00588 SpoU rRNA Methylase family At1D1108_14450 PF00180 Isocitrate/isopropylmalate dehydrogenase At1D1108_14480 PF01411 tRNA synthetases class II (A) At1D1108_14480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At1D1108_14480 PF02272 DHHA1 domain At1D1108_14490 PF00154 recA bacterial DNA recombination protein At1D1108_14500 PF00294 pfkB family carbohydrate kinase At1D1108_14510 PF04227 Indigoidine synthase A like protein At1D1108_14520 PF00691 OmpA family At1D1108_14520 PF01389 OmpA-like transmembrane domain At1D1108_14530 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_14540 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_14550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_14560 PF06233 Usg-like family At1D1108_14580 PF09084 NMT1/THI5 like At1D1108_14590 PF01037 Lrp/AsnC ligand binding domain At1D1108_14590 PF13404 AsnC-type helix-turn-helix domain At1D1108_14600 PF03167 Uracil DNA glycosylase superfamily At1D1108_14620 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_14620 PF00989 PAS fold At1D1108_14620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_14630 PF01219 Prokaryotic diacylglycerol kinase At1D1108_14640 PF02277 Phosphoribosyltransferase At1D1108_14650 PF02654 Cobalamin-5-phosphate synthase At1D1108_14680 PF01061 ABC-2 type transporter At1D1108_14690 PF00005 ABC transporter At1D1108_14700 PF01925 Sulfite exporter TauE/SafE At1D1108_14720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_14720 PF17200 Single Cache domain 2 At1D1108_14720 PF00672 HAMP domain At1D1108_14720 PF17200 Single Cache domain 2 At1D1108_14720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_14720 PF00672 HAMP domain At1D1108_14740 PF16193 AAA C-terminal domain At1D1108_14740 PF12002 MgsA AAA+ ATPase C terminal At1D1108_14740 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_14750 PF00595 PDZ domain At1D1108_14750 PF13180 PDZ domain At1D1108_14780 PF00920 Dehydratase family At1D1108_14790 PF00174 Oxidoreductase molybdopterin binding domain At1D1108_14800 PF01794 Ferric reductase like transmembrane component At1D1108_14820 PF05675 Protein of unknown function (DUF817) At1D1108_14840 PF01196 Ribosomal protein L17 At1D1108_14850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain At1D1108_14850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain At1D1108_14850 PF01000 RNA polymerase Rpb3/RpoA insert domain At1D1108_14860 PF00411 Ribosomal protein S11 At1D1108_14870 PF00416 Ribosomal protein S13/S18 At1D1108_14890 PF00344 SecY translocase At1D1108_14900 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A At1D1108_14910 PF00327 Ribosomal protein L30p/L7e At1D1108_14920 PF00333 Ribosomal protein S5, N-terminal domain At1D1108_14920 PF03719 Ribosomal protein S5, C-terminal domain At1D1108_14930 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast At1D1108_14940 PF00347 Ribosomal protein L6 At1D1108_14950 PF00410 Ribosomal protein S8 At1D1108_14960 PF00253 Ribosomal protein S14p/S29e At1D1108_14970 PF00281 Ribosomal protein L5 At1D1108_14970 PF00673 ribosomal L5P family C-terminus At1D1108_14980 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 At1D1108_14980 PF00467 KOW motif At1D1108_14990 PF00238 Ribosomal protein L14p/L23e At1D1108_15000 PF00366 Ribosomal protein S17 At1D1108_15010 PF00831 Ribosomal L29 protein At1D1108_15020 PF00252 Ribosomal protein L16p/L10e At1D1108_15030 PF07650 KH domain At1D1108_15030 PF00189 Ribosomal protein S3, C-terminal domain At1D1108_15040 PF00237 Ribosomal protein L22p/L17e At1D1108_15050 PF00203 Ribosomal protein S19 At1D1108_15060 PF00181 Ribosomal Proteins L2, RNA binding domain At1D1108_15060 PF03947 Ribosomal Proteins L2, C-terminal domain At1D1108_15070 PF00276 Ribosomal protein L23 At1D1108_15080 PF00573 Ribosomal protein L4/L1 family At1D1108_15090 PF00297 Ribosomal protein L3 At1D1108_15100 PF00338 Ribosomal protein S10p/S20e At1D1108_15110 PF03143 Elongation factor Tu C-terminal domain At1D1108_15110 PF03144 Elongation factor Tu domain 2 At1D1108_15110 PF00009 Elongation factor Tu GTP binding domain At1D1108_15120 PF03144 Elongation factor Tu domain 2 At1D1108_15120 PF00009 Elongation factor Tu GTP binding domain At1D1108_15120 PF03764 Elongation factor G, domain IV At1D1108_15120 PF14492 Elongation Factor G, domain II At1D1108_15120 PF00679 Elongation factor G C-terminus At1D1108_15130 PF00177 Ribosomal protein S7p/S5e At1D1108_15140 PF00164 Ribosomal protein S12/S23 At1D1108_15170 PF04997 RNA polymerase Rpb1, domain 1 At1D1108_15170 PF00623 RNA polymerase Rpb1, domain 2 At1D1108_15170 PF04983 RNA polymerase Rpb1, domain 3 At1D1108_15170 PF04998 RNA polymerase Rpb1, domain 5 At1D1108_15170 PF05000 RNA polymerase Rpb1, domain 4 At1D1108_15180 PF00562 RNA polymerase Rpb2, domain 6 At1D1108_15180 PF04560 RNA polymerase Rpb2, domain 7 At1D1108_15180 PF04563 RNA polymerase beta subunit At1D1108_15180 PF10385 RNA polymerase beta subunit external 1 domain At1D1108_15180 PF04565 RNA polymerase Rpb2, domain 3 At1D1108_15180 PF04561 RNA polymerase Rpb2, domain 2 At1D1108_15190 PF00542 Ribosomal protein L7/L12 C-terminal domain At1D1108_15190 PF16320 Ribosomal protein L7/L12 dimerisation domain At1D1108_15200 PF00466 Ribosomal protein L10 At1D1108_15210 PF00687 Ribosomal protein L1p/L10e family At1D1108_15220 PF00298 Ribosomal protein L11, RNA binding domain At1D1108_15220 PF03946 Ribosomal protein L11, N-terminal domain At1D1108_15230 PF00467 KOW motif At1D1108_15230 PF02357 Transcription termination factor nusG At1D1108_15240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex At1D1108_15260 PF00009 Elongation factor Tu GTP binding domain At1D1108_15260 PF03144 Elongation factor Tu domain 2 At1D1108_15260 PF03143 Elongation factor Tu C-terminal domain At1D1108_15270 PF03741 Integral membrane protein TerC family At1D1108_15320 PF08032 RNA 2'-O ribose methyltransferase substrate binding At1D1108_15320 PF00588 SpoU rRNA Methylase family At1D1108_15330 PF03061 Thioesterase superfamily At1D1108_15380 PF13460 NAD(P)H-binding At1D1108_15390 PF01638 HxlR-like helix-turn-helix At1D1108_15410 PF00271 Helicase conserved C-terminal domain At1D1108_15410 PF12344 Ultra-violet resistance protein B At1D1108_15410 PF02151 UvrB/uvrC motif At1D1108_15410 PF04851 Type III restriction enzyme, res subunit At1D1108_15410 PF17757 UvrB interaction domain At1D1108_15420 PF00756 Putative esterase At1D1108_15420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1108_15460 PF00226 DnaJ domain At1D1108_15460 PF00684 DnaJ central domain At1D1108_15460 PF01556 DnaJ C terminal domain At1D1108_15480 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_15480 PF17151 Periplasmic sensor domain At1D1108_15500 PF08402 TOBE domain At1D1108_15500 PF00005 ABC transporter At1D1108_15520 PF01547 Bacterial extracellular solute-binding protein At1D1108_15530 PF00155 Aminotransferase class I and II At1D1108_15560 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain At1D1108_15560 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain At1D1108_15570 PF00440 Bacterial regulatory proteins, tetR family At1D1108_15590 PF12833 Helix-turn-helix domain At1D1108_15590 PF06719 AraC-type transcriptional regulator N-terminus At1D1108_15600 PF00107 Zinc-binding dehydrogenase At1D1108_15600 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_15610 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_15620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ At1D1108_15630 PF03472 Autoinducer binding domain At1D1108_15630 PF00196 Bacterial regulatory proteins, luxR family At1D1108_15640 PF14490 Helix-hairpin-helix containing domain At1D1108_15640 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain At1D1108_15640 PF13538 UvrD-like helicase C-terminal domain At1D1108_15650 PF01370 NAD dependent epimerase/dehydratase family At1D1108_15650 PF08338 Domain of unknown function (DUF1731) At1D1108_15700 PF08281 Sigma-70, region 4 At1D1108_15700 PF04542 Sigma-70 region 2 At1D1108_15720 PF01810 LysE type translocator At1D1108_15730 PF00248 Aldo/keto reductase family At1D1108_15760 PF10369 Small subunit of acetolactate synthase At1D1108_15770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1108_15770 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1108_15770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1108_15810 PF13302 Acetyltransferase (GNAT) domain At1D1108_15830 PF13180 PDZ domain At1D1108_15840 PF01145 SPFH domain / Band 7 family At1D1108_15850 PF01145 SPFH domain / Band 7 family At1D1108_15860 PF00186 Dihydrofolate reductase At1D1108_15870 PF00303 Thymidylate synthase At1D1108_15940 PF02913 FAD linked oxidases, C-terminal domain At1D1108_15940 PF01565 FAD binding domain At1D1108_15970 PF00873 AcrB/AcrD/AcrF family At1D1108_15980 PF13533 Biotin-lipoyl like At1D1108_16000 PF13361 UvrD-like helicase C-terminal domain At1D1108_16000 PF00580 UvrD/REP helicase N-terminal domain At1D1108_16020 PF13977 BetI-type transcriptional repressor, C-terminal At1D1108_16020 PF00440 Bacterial regulatory proteins, tetR family At1D1108_16030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1108_16040 PF00561 alpha/beta hydrolase fold At1D1108_16080 PF00857 Isochorismatase family At1D1108_16120 PF00557 Metallopeptidase family M24 At1D1108_16120 PF01321 Creatinase/Prolidase N-terminal domain At1D1108_16150 PF02630 SCO1/SenC At1D1108_16170 PF01584 CheW-like domain At1D1108_16190 PF00929 Exonuclease At1D1108_16200 PF03466 LysR substrate binding domain At1D1108_16200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_16220 PF00583 Acetyltransferase (GNAT) family At1D1108_16240 PF01653 NAD-dependent DNA ligase adenylation domain At1D1108_16240 PF12826 Helix-hairpin-helix motif At1D1108_16240 PF03120 NAD-dependent DNA ligase OB-fold domain At1D1108_16240 PF00533 BRCA1 C Terminus (BRCT) domain At1D1108_16240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain At1D1108_16250 PF01810 LysE type translocator At1D1108_16260 PF02463 RecF/RecN/SMC N terminal domain At1D1108_16270 PF13525 Outer membrane lipoprotein At1D1108_16280 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase At1D1108_16290 PF12327 FtsZ family, C-terminal domain At1D1108_16290 PF00091 Tubulin/FtsZ family, GTPase domain At1D1108_16300 PF02491 SHS2 domain inserted in FTSA At1D1108_16310 PF08478 POTRA domain, FtsQ-type At1D1108_16310 PF03799 Cell division protein FtsQ At1D1108_16320 PF07478 D-ala D-ala ligase C-terminus At1D1108_16320 PF01820 D-ala D-ala ligase N-terminus At1D1108_16330 PF07690 Major Facilitator Superfamily At1D1108_16330 PF00083 Sugar (and other) transporter At1D1108_16340 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_16340 PF17158 Membrane-associated sensor, integral membrane domain At1D1108_16350 PF01565 FAD binding domain At1D1108_16350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain At1D1108_16360 PF08245 Mur ligase middle domain At1D1108_16360 PF01225 Mur ligase family, catalytic domain At1D1108_16360 PF02875 Mur ligase family, glutamate ligase domain At1D1108_16370 PF04101 Glycosyltransferase family 28 C-terminal domain At1D1108_16370 PF03033 Glycosyltransferase family 28 N-terminal domain At1D1108_16380 PF01098 Cell cycle protein At1D1108_16390 PF02875 Mur ligase family, glutamate ligase domain At1D1108_16390 PF08245 Mur ligase middle domain At1D1108_16400 PF00953 Glycosyl transferase family 4 At1D1108_16400 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 At1D1108_16410 PF02875 Mur ligase family, glutamate ligase domain At1D1108_16410 PF01225 Mur ligase family, catalytic domain At1D1108_16410 PF08245 Mur ligase middle domain At1D1108_16420 PF01225 Mur ligase family, catalytic domain At1D1108_16420 PF02875 Mur ligase family, glutamate ligase domain At1D1108_16420 PF08245 Mur ligase middle domain At1D1108_16430 PF03717 Penicillin-binding Protein dimerisation domain At1D1108_16430 PF00905 Penicillin binding protein transpeptidase domain At1D1108_16450 PF01795 MraW methylase family At1D1108_16460 PF02381 MraZ protein, putative antitoxin-like At1D1108_16500 PF01510 N-acetylmuramoyl-L-alanine amidase At1D1108_16510 PF00226 DnaJ domain At1D1108_16510 PF05099 Tellurite resistance protein TerB At1D1108_16520 PF00365 Phosphofructokinase At1D1108_16560 PF13649 Methyltransferase domain At1D1108_16570 PF01183 Glycosyl hydrolases family 25 At1D1108_16590 PF02219 Methylenetetrahydrofolate reductase At1D1108_16600 PF01209 ubiE/COQ5 methyltransferase family At1D1108_16610 PF00005 ABC transporter At1D1108_16610 PF12848 ABC transporter At1D1108_16620 PF12146 Serine aminopeptidase, S33 At1D1108_16630 PF02515 CoA-transferase family III At1D1108_16640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1108_16640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1108_16640 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1108_16660 PF01042 Endoribonuclease L-PSP At1D1108_16690 PF01476 LysM domain At1D1108_16690 PF03734 L,D-transpeptidase catalytic domain At1D1108_16700 PF07690 Major Facilitator Superfamily At1D1108_16720 PF10609 NUBPL iron-transfer P-loop NTPase At1D1108_16740 PF00465 Iron-containing alcohol dehydrogenase At1D1108_16750 PF00171 Aldehyde dehydrogenase family At1D1108_16760 PF03951 Glutamine synthetase, beta-Grasp domain At1D1108_16760 PF00120 Glutamine synthetase, catalytic domain At1D1108_16770 PF13520 Amino acid permease At1D1108_16790 PF01418 Helix-turn-helix domain, rpiR family At1D1108_16790 PF01380 SIS domain At1D1108_16830 PF00005 ABC transporter At1D1108_16830 PF08402 TOBE domain At1D1108_16840 PF00107 Zinc-binding dehydrogenase At1D1108_16840 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_16870 PF07690 Major Facilitator Superfamily At1D1108_16880 PF02574 Homocysteine S-methyltransferase At1D1108_16880 PF00809 Pterin binding enzyme At1D1108_16880 PF02965 Vitamin B12 dependent methionine synthase, activation domain At1D1108_16880 PF02310 B12 binding domain At1D1108_16880 PF02607 B12 binding domain At1D1108_16920 PF13505 Outer membrane protein beta-barrel domain At1D1108_16940 PF04402 Protein of unknown function (DUF541) At1D1108_16960 PF01894 Uncharacterised protein family UPF0047 At1D1108_16970 PF08446 PAS fold At1D1108_16970 PF00360 Phytochrome region At1D1108_16970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_16970 PF01590 GAF domain At1D1108_16970 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_16990 PF04539 Sigma-70 region 3 At1D1108_16990 PF04542 Sigma-70 region 2 At1D1108_16990 PF00140 Sigma-70 factor, region 1.2 At1D1108_16990 PF03979 Sigma-70 factor, region 1.1 At1D1108_16990 PF04545 Sigma-70, region 4 At1D1108_16990 PF04546 Sigma-70, non-essential region At1D1108_17000 PF10410 DnaB-helicase binding domain of primase At1D1108_17000 PF01807 CHC2 zinc finger At1D1108_17000 PF08275 DNA primase catalytic core, N-terminal domain At1D1108_17000 PF08278 DNA primase DnaG DnaB-binding At1D1108_17020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain At1D1108_17020 PF00117 Glutamine amidotransferase class-I At1D1108_17030 PF01554 MatE At1D1108_17040 PF02743 Cache domain At1D1108_17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_17040 PF00672 HAMP domain At1D1108_17060 PF04228 Putative neutral zinc metallopeptidase At1D1108_17090 PF02142 MGS-like domain At1D1108_17090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain At1D1108_17090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_17100 PF17158 Membrane-associated sensor, integral membrane domain At1D1108_17100 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_17110 PF03167 Uracil DNA glycosylase superfamily At1D1108_17130 PF03449 Transcription elongation factor, N-terminal At1D1108_17130 PF01272 Transcription elongation factor, GreA/GreB, C-term At1D1108_17140 PF00534 Glycosyl transferases group 1 At1D1108_17150 PF01037 Lrp/AsnC ligand binding domain At1D1108_17160 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_17170 PF03466 LysR substrate binding domain At1D1108_17170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_17190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_17220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_17220 PF03466 LysR substrate binding domain At1D1108_17240 PF01699 Sodium/calcium exchanger protein At1D1108_17260 PF00563 EAL domain At1D1108_17260 PF05231 MASE1 At1D1108_17290 PF00313 'Cold-shock' DNA-binding domain At1D1108_17300 PF00753 Metallo-beta-lactamase superfamily At1D1108_17320 PF12802 MarR family At1D1108_17330 PF00072 Response regulator receiver domain At1D1108_17330 PF00486 Transcriptional regulatory protein, C terminal At1D1108_17340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_17340 PF00672 HAMP domain At1D1108_17340 PF16527 Two-component sensor protein CpxA, periplasmic domain At1D1108_17340 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_17350 PF01588 Putative tRNA binding domain At1D1108_17360 PF14748 Pyrroline-5-carboxylate reductase dimerisation At1D1108_17360 PF03807 NADP oxidoreductase coenzyme F420-dependent At1D1108_17400 PF01790 Prolipoprotein diacylglyceryl transferase At1D1108_17450 PF14572 Phosphoribosyl synthetase-associated domain At1D1108_17450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase At1D1108_17470 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase At1D1108_17490 PF00535 Glycosyl transferase family 2 At1D1108_17500 PF02203 Tar ligand binding domain homologue At1D1108_17500 PF00672 HAMP domain At1D1108_17500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_17510 PF00171 Aldehyde dehydrogenase family At1D1108_17520 PF00158 Sigma-54 interaction domain At1D1108_17520 PF02954 Bacterial regulatory protein, Fis family At1D1108_17520 PF13426 PAS domain At1D1108_17530 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_17530 PF03707 Bacterial signalling protein N terminal repeat At1D1108_17530 PF13188 PAS domain At1D1108_17530 PF00563 EAL domain At1D1108_17540 PF14693 Ribosomal protein TL5, C-terminal domain At1D1108_17540 PF01386 Ribosomal L25p family At1D1108_17550 PF00563 EAL domain At1D1108_17550 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_17550 PF08448 PAS fold At1D1108_17550 PF08447 PAS fold At1D1108_17570 PF01195 Peptidyl-tRNA hydrolase At1D1108_17590 PF02617 ATP-dependent Clp protease adaptor protein ClpS At1D1108_17600 PF06071 Protein of unknown function (DUF933) At1D1108_17600 PF01926 50S ribosome-binding GTPase At1D1108_17640 PF00156 Phosphoribosyl transferase domain At1D1108_17660 PF00032 Cytochrome b(C-terminal)/b6/petD At1D1108_17660 PF02167 Cytochrome C1 family At1D1108_17660 PF00033 Cytochrome b/b6/petB At1D1108_17670 PF00033 Cytochrome b/b6/petB At1D1108_17670 PF00032 Cytochrome b(C-terminal)/b6/petD At1D1108_17680 PF00355 Rieske [2Fe-2S] domain At1D1108_17680 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal At1D1108_17700 PF00005 ABC transporter At1D1108_17700 PF00664 ABC transporter transmembrane region At1D1108_17710 PF00005 ABC transporter At1D1108_17710 PF00664 ABC transporter transmembrane region At1D1108_17730 PF00588 SpoU rRNA Methylase family At1D1108_17740 PF02690 Na+/Pi-cotransporter At1D1108_17760 PF01218 Coproporphyrinogen III oxidase At1D1108_17790 PF13735 tRNA nucleotidyltransferase domain 2 putative At1D1108_17790 PF01743 Poly A polymerase head domain At1D1108_17790 PF12627 Probable RNA and SrmB- binding site of polymerase A At1D1108_17800 PF00293 NUDIX domain At1D1108_17820 PF17863 AAA lid domain At1D1108_17820 PF07726 ATPase family associated with various cellular activities (AAA) At1D1108_17860 PF00583 Acetyltransferase (GNAT) family At1D1108_17870 PF07690 Major Facilitator Superfamily At1D1108_17890 PF13409 Glutathione S-transferase, N-terminal domain At1D1108_17920 PF08502 LeuA allosteric (dimerisation) domain At1D1108_17920 PF00682 HMGL-like At1D1108_17930 PF03594 Benzoate membrane transport protein At1D1108_17940 PF06532 Negative regulator of sigma F At1D1108_17950 PF04545 Sigma-70, region 4 At1D1108_17950 PF04542 Sigma-70 region 2 At1D1108_17970 PF00574 Clp protease At1D1108_17980 PF04955 HupE / UreJ protein At1D1108_18000 PF14489 QueF-like protein At1D1108_18010 PF16916 Dimerisation domain of Zinc Transporter At1D1108_18010 PF01545 Cation efflux family At1D1108_18030 PF13458 Periplasmic binding protein At1D1108_18050 PF01022 Bacterial regulatory protein, arsR family At1D1108_18060 PF00571 CBS domain At1D1108_18060 PF00005 ABC transporter At1D1108_18070 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_18080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1108_18090 PF00265 Thymidine kinase At1D1108_18100 PF00127 Copper binding proteins, plastocyanin/azurin family At1D1108_18120 PF03472 Autoinducer binding domain At1D1108_18120 PF00196 Bacterial regulatory proteins, luxR family At1D1108_18130 PF03350 Uncharacterized protein family, UPF0114 At1D1108_18140 PF04886 PT repeat At1D1108_18140 PF07715 TonB-dependent Receptor Plug Domain At1D1108_18140 PF00593 TonB dependent receptor At1D1108_18160 PF04715 Anthranilate synthase component I, N terminal region At1D1108_18160 PF00117 Glutamine amidotransferase class-I At1D1108_18160 PF00425 chorismate binding enzyme At1D1108_18170 PF11871 Domain of unknown function (DUF3391) At1D1108_18170 PF01966 HD domain At1D1108_18180 PF01979 Amidohydrolase family At1D1108_18180 PF13382 Adenine deaminase C-terminal domain At1D1108_18190 PF00583 Acetyltransferase (GNAT) family At1D1108_18200 PF00128 Alpha amylase, catalytic domain At1D1108_18210 PF00294 pfkB family carbohydrate kinase At1D1108_18240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal At1D1108_18240 PF01926 50S ribosome-binding GTPase At1D1108_18280 PF05992 SbmA/BacA-like family At1D1108_18300 PF00557 Metallopeptidase family M24 At1D1108_18330 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1108_18330 PF01799 [2Fe-2S] binding domain At1D1108_18340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At1D1108_18340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At1D1108_18360 PF03466 LysR substrate binding domain At1D1108_18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_18390 PF01979 Amidohydrolase family At1D1108_18410 PF01070 FMN-dependent dehydrogenase At1D1108_18420 PF00893 Small Multidrug Resistance protein At1D1108_18430 PF17932 Tetracyclin repressor-like, C-terminal domain At1D1108_18430 PF00440 Bacterial regulatory proteins, tetR family At1D1108_18440 PF00768 D-alanyl-D-alanine carboxypeptidase At1D1108_18440 PF07943 Penicillin-binding protein 5, C-terminal domain At1D1108_18460 PF00576 HIUase/Transthyretin family At1D1108_18470 PF04115 Ureidoglycolate lyase At1D1108_18500 PF09349 OHCU decarboxylase At1D1108_18500 PF01014 Uricase At1D1108_18520 PF06299 Protein of unknown function (DUF1045) At1D1108_18540 PF01266 FAD dependent oxidoreductase At1D1108_18540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase At1D1108_18550 PF01627 Hpt domain At1D1108_18550 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_18550 PF00672 HAMP domain At1D1108_18550 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At1D1108_18550 PF00072 Response regulator receiver domain At1D1108_18560 PF00271 Helicase conserved C-terminal domain At1D1108_18560 PF00270 DEAD/DEAH box helicase At1D1108_18580 PF07681 DoxX At1D1108_18590 PF03734 L,D-transpeptidase catalytic domain At1D1108_18590 PF01476 LysM domain At1D1108_18610 PF14403 Circularly permuted ATP-grasp type 2 At1D1108_18620 PF14403 Circularly permuted ATP-grasp type 2 At1D1108_18620 PF04168 A predicted alpha-helical domain with a conserved ER motif. At1D1108_18630 PF08379 Bacterial transglutaminase-like N-terminal region At1D1108_18630 PF01841 Transglutaminase-like superfamily At1D1108_18670 PF00300 Histidine phosphatase superfamily (branch 1) At1D1108_18690 PF02653 Branched-chain amino acid transport system / permease component At1D1108_18700 PF00005 ABC transporter At1D1108_18710 PF13407 Periplasmic binding protein domain At1D1108_18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_18720 PF03466 LysR substrate binding domain At1D1108_18780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_18780 PF00672 HAMP domain At1D1108_18780 PF02203 Tar ligand binding domain homologue At1D1108_18790 PF02607 B12 binding domain At1D1108_18790 PF02965 Vitamin B12 dependent methionine synthase, activation domain At1D1108_18790 PF00809 Pterin binding enzyme At1D1108_18790 PF02310 B12 binding domain At1D1108_18790 PF02574 Homocysteine S-methyltransferase At1D1108_18800 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_18810 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_18820 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_18830 PF00005 ABC transporter At1D1108_18870 PF00331 Glycosyl hydrolase family 10 At1D1108_18880 PF00535 Glycosyl transferase family 2 At1D1108_18910 PF03808 Glycosyl transferase WecB/TagA/CpsF family At1D1108_18940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At1D1108_18940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At1D1108_18940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At1D1108_18940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At1D1108_18950 PF01152 Bacterial-like globin At1D1108_18990 PF00440 Bacterial regulatory proteins, tetR family At1D1108_18990 PF08362 YcdC-like protein, C-terminal region At1D1108_19000 PF07687 Peptidase dimerisation domain At1D1108_19000 PF01546 Peptidase family M20/M25/M40 At1D1108_19010 PF01979 Amidohydrolase family At1D1108_19020 PF00293 NUDIX domain At1D1108_19030 PF00005 ABC transporter At1D1108_19040 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_19050 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_19080 PF00873 AcrB/AcrD/AcrF family At1D1108_19100 PF00753 Metallo-beta-lactamase superfamily At1D1108_19110 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1108_19120 PF01730 UreF At1D1108_19130 PF05194 UreE urease accessory protein, C-terminal domain At1D1108_19130 PF02814 UreE urease accessory protein, N-terminal domain At1D1108_19140 PF08534 Redoxin At1D1108_19160 PF00449 Urease alpha-subunit, N-terminal domain At1D1108_19160 PF01979 Amidohydrolase family At1D1108_19180 PF07007 Lysozyme inhibitor LprI At1D1108_19200 PF00699 Urease beta subunit At1D1108_19210 PF06906 Protein of unknown function (DUF1272) At1D1108_19220 PF00547 Urease, gamma subunit At1D1108_19230 PF01774 UreD urease accessory protein At1D1108_19250 PF00005 ABC transporter At1D1108_19260 PF00005 ABC transporter At1D1108_19260 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_19280 PF02653 Branched-chain amino acid transport system / permease component At1D1108_19300 PF10931 Protein of unknown function (DUF2735) At1D1108_19310 PF03951 Glutamine synthetase, beta-Grasp domain At1D1108_19310 PF00120 Glutamine synthetase, catalytic domain At1D1108_19330 PF00072 Response regulator receiver domain At1D1108_19330 PF00989 PAS fold At1D1108_19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_19330 PF01627 Hpt domain At1D1108_19330 PF18415 Histidine kinase receptor ArcB trans-membrane domain At1D1108_19330 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_19340 PF00072 Response regulator receiver domain At1D1108_19360 PF13458 Periplasmic binding protein At1D1108_19380 PF00005 ABC transporter At1D1108_19390 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_19390 PF00005 ABC transporter At1D1108_19400 PF02653 Branched-chain amino acid transport system / permease component At1D1108_19400 PF11862 Domain of unknown function (DUF3382) At1D1108_19410 PF02653 Branched-chain amino acid transport system / permease component At1D1108_19420 PF00459 Inositol monophosphatase family At1D1108_19490 PF00072 Response regulator receiver domain At1D1108_19490 PF00486 Transcriptional regulatory protein, C terminal At1D1108_19530 PF10090 Histidine phosphotransferase C-terminal domain At1D1108_19560 PF00588 SpoU rRNA Methylase family At1D1108_19580 PF00849 RNA pseudouridylate synthase At1D1108_19610 PF04545 Sigma-70, region 4 At1D1108_19610 PF00140 Sigma-70 factor, region 1.2 At1D1108_19610 PF04542 Sigma-70 region 2 At1D1108_19630 PF00709 Adenylosuccinate synthetase At1D1108_19680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_19700 PF03167 Uracil DNA glycosylase superfamily At1D1108_19710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_19720 PF04304 Protein of unknown function (DUF454) At1D1108_19730 PF00005 ABC transporter At1D1108_19740 PF01032 FecCD transport family At1D1108_19750 PF01497 Periplasmic binding protein At1D1108_19780 PF06228 Haem utilisation ChuX/HutX At1D1108_19800 PF00551 Formyl transferase At1D1108_19820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_19820 PF00672 HAMP domain At1D1108_19820 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_19830 PF00072 Response regulator receiver domain At1D1108_19830 PF00486 Transcriptional regulatory protein, C terminal At1D1108_19850 PF03401 Tripartite tricarboxylate transporter family receptor At1D1108_19870 PF01970 Tripartite tricarboxylate transporter TctA family At1D1108_19900 PF01032 FecCD transport family At1D1108_19910 PF01032 FecCD transport family At1D1108_19920 PF00005 ABC transporter At1D1108_19930 PF00210 Ferritin-like domain At1D1108_19950 PF00672 HAMP domain At1D1108_19950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_19960 PF00248 Aldo/keto reductase family At1D1108_19970 PF07690 Major Facilitator Superfamily At1D1108_19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_19980 PF03466 LysR substrate binding domain At1D1108_19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_19990 PF03466 LysR substrate binding domain At1D1108_20010 PF13533 Biotin-lipoyl like At1D1108_20020 PF00873 AcrB/AcrD/AcrF family At1D1108_20050 PF13396 Phospholipase_D-nuclease N-terminal At1D1108_20050 PF13091 PLD-like domain At1D1108_20060 PF08543 Phosphomethylpyrimidine kinase At1D1108_20070 PF00484 Carbonic anhydrase At1D1108_20090 PF01118 Semialdehyde dehydrogenase, NAD binding domain At1D1108_20090 PF02774 Semialdehyde dehydrogenase, dimerisation domain At1D1108_20100 PF00083 Sugar (and other) transporter At1D1108_20110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain At1D1108_20110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At1D1108_20110 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch At1D1108_20120 PF02233 NAD(P) transhydrogenase beta subunit At1D1108_20130 PF01613 Flavin reductase like domain At1D1108_20140 PF00881 Nitroreductase family At1D1108_20150 PF00561 alpha/beta hydrolase fold At1D1108_20160 PF01042 Endoribonuclease L-PSP At1D1108_20170 PF00857 Isochorismatase family At1D1108_20180 PF00296 Luciferase-like monooxygenase At1D1108_20190 PF01126 Heme oxygenase At1D1108_20200 PF00701 Dihydrodipicolinate synthetase family At1D1108_20210 PF07729 FCD domain At1D1108_20210 PF00392 Bacterial regulatory proteins, gntR family At1D1108_20230 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20250 PF00005 ABC transporter At1D1108_20250 PF17912 MalK OB fold domain At1D1108_20250 PF03459 TOBE domain At1D1108_20260 PF00294 pfkB family carbohydrate kinase At1D1108_20270 PF03576 Peptidase family S58 At1D1108_20280 PF01063 Amino-transferase class IV At1D1108_20290 PF03466 LysR substrate binding domain At1D1108_20290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_20310 PF00005 ABC transporter At1D1108_20310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_20320 PF00005 ABC transporter At1D1108_20320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_20340 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_20360 PF01244 Membrane dipeptidase (Peptidase family M19) At1D1108_20380 PF03706 Lysylphosphatidylglycerol synthase TM region At1D1108_20380 PF09924 Uncharacterised conserved protein (DUF2156) At1D1108_20420 PF07690 Major Facilitator Superfamily At1D1108_20440 PF00775 Dioxygenase At1D1108_20440 PF04444 Catechol dioxygenase N terminus At1D1108_20450 PF00465 Iron-containing alcohol dehydrogenase At1D1108_20460 PF04909 Amidohydrolase At1D1108_20470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_20480 PF01613 Flavin reductase like domain At1D1108_20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_20510 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_20520 PF00486 Transcriptional regulatory protein, C terminal At1D1108_20520 PF00072 Response regulator receiver domain At1D1108_20540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_20550 PF00005 ABC transporter At1D1108_20550 PF08402 TOBE domain At1D1108_20560 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20590 PF00072 Response regulator receiver domain At1D1108_20590 PF00486 Transcriptional regulatory protein, C terminal At1D1108_20600 PF00072 Response regulator receiver domain At1D1108_20600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_20600 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_20600 PF08448 PAS fold At1D1108_20600 PF13188 PAS domain At1D1108_20620 PF13614 AAA domain At1D1108_20630 PF01339 CheB methylesterase At1D1108_20630 PF00072 Response regulator receiver domain At1D1108_20640 PF01739 CheR methyltransferase, SAM binding domain At1D1108_20640 PF03705 CheR methyltransferase, all-alpha domain At1D1108_20650 PF01584 CheW-like domain At1D1108_20660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_20660 PF00672 HAMP domain At1D1108_20660 PF02203 Tar ligand binding domain homologue At1D1108_20670 PF01584 CheW-like domain At1D1108_20680 PF01584 CheW-like domain At1D1108_20680 PF09078 CheY binding At1D1108_20680 PF02895 Signal transducing histidine kinase, homodimeric domain At1D1108_20680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_20680 PF01627 Hpt domain At1D1108_20690 PF00072 Response regulator receiver domain At1D1108_20710 PF00072 Response regulator receiver domain At1D1108_20720 PF00296 Luciferase-like monooxygenase At1D1108_20730 PF01613 Flavin reductase like domain At1D1108_20740 PF03466 LysR substrate binding domain At1D1108_20740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_20750 PF00355 Rieske [2Fe-2S] domain At1D1108_20760 PF00005 ABC transporter At1D1108_20770 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_20780 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20790 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20800 PF01565 FAD binding domain At1D1108_20800 PF02913 FAD linked oxidases, C-terminal domain At1D1108_20810 PF00155 Aminotransferase class I and II At1D1108_20820 PF00042 Globin At1D1108_20820 PF00970 Oxidoreductase FAD-binding domain At1D1108_20820 PF00175 Oxidoreductase NAD-binding domain At1D1108_20830 PF01259 SAICAR synthetase At1D1108_20850 PF00529 HlyD membrane-fusion protein of T1SS At1D1108_20850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1108_20860 PF00873 AcrB/AcrD/AcrF family At1D1108_20870 PF02321 Outer membrane efflux protein At1D1108_20880 PF01132 Elongation factor P (EF-P) OB domain At1D1108_20880 PF08207 Elongation factor P (EF-P) KOW-like domain At1D1108_20880 PF09285 Elongation factor P, C-terminal At1D1108_20890 PF00152 tRNA synthetases class II (D, K and N) At1D1108_20900 PF12544 Lysine-2,3-aminomutase At1D1108_20900 PF04055 Radical SAM superfamily At1D1108_20930 PF03466 LysR substrate binding domain At1D1108_20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_20940 PF01266 FAD dependent oxidoreductase At1D1108_20960 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_20970 PF03459 TOBE domain At1D1108_20970 PF00005 ABC transporter At1D1108_20990 PF03576 Peptidase family S58 At1D1108_21000 PF05690 Thiazole biosynthesis protein ThiG At1D1108_21020 PF01266 FAD dependent oxidoreductase At1D1108_21030 PF01964 Radical SAM ThiC family At1D1108_21030 PF13667 ThiC-associated domain At1D1108_21040 PF00550 Phosphopantetheine attachment site At1D1108_21100 PF00005 ABC transporter At1D1108_21100 PF00664 ABC transporter transmembrane region At1D1108_21110 PF00027 Cyclic nucleotide-binding domain At1D1108_21110 PF13545 Crp-like helix-turn-helix domain At1D1108_21130 PF00672 HAMP domain At1D1108_21130 PF00211 Adenylate and Guanylate cyclase catalytic domain At1D1108_21150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At1D1108_21150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At1D1108_21150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At1D1108_21160 PF13439 Glycosyltransferase Family 4 At1D1108_21160 PF00534 Glycosyl transferases group 1 At1D1108_21190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_21190 PF00005 ABC transporter At1D1108_21200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_21210 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_21220 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_21220 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_21240 PF13439 Glycosyltransferase Family 4 At1D1108_21240 PF00534 Glycosyl transferases group 1 At1D1108_21250 PF03033 Glycosyltransferase family 28 N-terminal domain At1D1108_21250 PF04101 Glycosyltransferase family 28 C-terminal domain At1D1108_21260 PF03932 CutC family At1D1108_21270 PF07690 Major Facilitator Superfamily At1D1108_21290 PF00728 Glycosyl hydrolase family 20, catalytic domain At1D1108_21290 PF02838 Glycosyl hydrolase family 20, domain 2 At1D1108_21310 PF01418 Helix-turn-helix domain, rpiR family At1D1108_21310 PF01380 SIS domain At1D1108_21330 PF17912 MalK OB fold domain At1D1108_21330 PF00005 ABC transporter At1D1108_21340 PF01547 Bacterial extracellular solute-binding protein At1D1108_21350 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_21360 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_21390 PF01380 SIS domain At1D1108_21400 PF01979 Amidohydrolase family At1D1108_21410 PF00480 ROK family At1D1108_21420 PF01494 FAD binding domain At1D1108_21430 PF01569 PAP2 superfamily At1D1108_21440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain At1D1108_21440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase At1D1108_21440 PF13288 DXP reductoisomerase C-terminal domain At1D1108_21450 PF00155 Aminotransferase class I and II At1D1108_21470 PF07244 Surface antigen variable number repeat At1D1108_21470 PF17243 POTRA domain TamA domain 1 At1D1108_21470 PF01103 Surface antigen At1D1108_21490 PF01584 CheW-like domain At1D1108_21500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_21500 PF08447 PAS fold At1D1108_21500 PF13426 PAS domain At1D1108_21510 PF02634 FdhD/NarQ family At1D1108_21520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain At1D1108_21530 PF02874 ATP synthase alpha/beta family, beta-barrel domain At1D1108_21530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1108_21540 PF00231 ATP synthase At1D1108_21550 PF02874 ATP synthase alpha/beta family, beta-barrel domain At1D1108_21550 PF00306 ATP synthase alpha/beta chain, C terminal domain At1D1108_21550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1108_21560 PF00213 ATP synthase delta (OSCP) subunit At1D1108_21580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain At1D1108_21580 PF17764 3′ DNA-binding domain (3′BD) At1D1108_21580 PF18074 Primosomal protein N C-terminal domain At1D1108_21580 PF00270 DEAD/DEAH box helicase At1D1108_21590 PF00589 Phage integrase family At1D1108_21590 PF02899 Phage integrase, N-terminal SAM-like domain At1D1108_21630 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_21630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1108_21640 PF01810 LysE type translocator At1D1108_21660 PF02817 e3 binding domain At1D1108_21660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At1D1108_21660 PF00364 Biotin-requiring enzyme At1D1108_21670 PF00676 Dehydrogenase E1 component At1D1108_21670 PF16078 2-oxoglutarate dehydrogenase N-terminus At1D1108_21670 PF02779 Transketolase, pyrimidine binding domain At1D1108_21670 PF16870 2-oxoglutarate dehydrogenase C-terminal At1D1108_21680 PF02629 CoA binding domain At1D1108_21680 PF00549 CoA-ligase At1D1108_21690 PF08442 ATP-grasp domain At1D1108_21690 PF00549 CoA-ligase At1D1108_21700 PF00056 lactate/malate dehydrogenase, NAD binding domain At1D1108_21700 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain At1D1108_21710 PF03969 AFG1-like ATPase At1D1108_21720 PF02974 Protease inhibitor Inh At1D1108_21730 PF13085 2Fe-2S iron-sulfur cluster binding domain At1D1108_21730 PF13237 4Fe-4S dicluster domain At1D1108_21740 PF00890 FAD binding domain At1D1108_21740 PF02910 Fumarate reductase flavoprotein C-term At1D1108_21760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit At1D1108_21810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus At1D1108_21810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus At1D1108_21820 PF00814 Glycoprotease family At1D1108_21830 PF03900 Porphobilinogen deaminase, C-terminal domain At1D1108_21830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain At1D1108_21880 PF00117 Glutamine amidotransferase class-I At1D1108_21900 PF02325 YGGT family At1D1108_21910 PF02594 Uncharacterised ACR, YggU family COG1872 At1D1108_21920 PF00719 Inorganic pyrophosphatase At1D1108_21950 PF01432 Peptidase family M3 At1D1108_21970 PF01047 MarR family At1D1108_21980 PF07690 Major Facilitator Superfamily At1D1108_21990 PF00764 Arginosuccinate synthase At1D1108_22000 PF00106 short chain dehydrogenase At1D1108_22010 PF01810 LysE type translocator At1D1108_22030 PF02653 Branched-chain amino acid transport system / permease component At1D1108_22050 PF04055 Radical SAM superfamily At1D1108_22080 PF01329 Pterin 4 alpha carbinolamine dehydratase At1D1108_22090 PF01451 Low molecular weight phosphotyrosine protein phosphatase At1D1108_22100 PF02834 LigT like Phosphoesterase At1D1108_22110 PF13472 GDSL-like Lipase/Acylhydrolase family At1D1108_22120 PF00005 ABC transporter At1D1108_22140 PF01027 Inhibitor of apoptosis-promoting Bax1 At1D1108_22170 PF00694 Aconitase C-terminal domain At1D1108_22170 PF00330 Aconitase family (aconitate hydratase) At1D1108_22180 PF00005 ABC transporter At1D1108_22190 PF03379 CcmB protein At1D1108_22200 PF01578 Cytochrome C assembly protein At1D1108_22220 PF08534 Redoxin At1D1108_22230 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_22230 PF17151 Periplasmic sensor domain At1D1108_22240 PF10755 Protein of unknown function (DUF2585) At1D1108_22250 PF04279 Intracellular septation protein A At1D1108_22260 PF00448 SRP54-type protein, GTPase domain At1D1108_22260 PF02881 SRP54-type protein, helical bundle domain At1D1108_22270 PF04055 Radical SAM superfamily At1D1108_22270 PF00919 Uncharacterized protein family UPF0004 At1D1108_22280 PF01678 Diaminopimelate epimerase At1D1108_22290 PF12706 Beta-lactamase superfamily domain At1D1108_22300 PF00448 SRP54-type protein, GTPase domain At1D1108_22300 PF02881 SRP54-type protein, helical bundle domain At1D1108_22300 PF02978 Signal peptide binding domain At1D1108_22310 PF02153 Prephenate dehydrogenase At1D1108_22310 PF01817 Chorismate mutase type II At1D1108_22320 PF00886 Ribosomal protein S16 At1D1108_22330 PF05239 PRC-barrel domain At1D1108_22330 PF01782 RimM N-terminal domain At1D1108_22340 PF01746 tRNA (Guanine-1)-methyltransferase At1D1108_22360 PF01245 Ribosomal protein L19 At1D1108_22370 PF00664 ABC transporter transmembrane region At1D1108_22370 PF00005 ABC transporter At1D1108_22380 PF00529 HlyD membrane-fusion protein of T1SS At1D1108_22380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1108_22400 PF07690 Major Facilitator Superfamily At1D1108_22410 PF00330 Aconitase family (aconitate hydratase) At1D1108_22420 PF01435 Peptidase family M48 At1D1108_22430 PF00005 ABC transporter At1D1108_22440 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_22450 PF01547 Bacterial extracellular solute-binding protein At1D1108_22490 PF04204 Homoserine O-succinyltransferase At1D1108_22500 PF01263 Aldose 1-epimerase At1D1108_22510 PF00912 Transglycosylase At1D1108_22520 PF00348 Polyprenyl synthetase At1D1108_22530 PF13488 Glycine zipper At1D1108_22530 PF00691 OmpA family At1D1108_22540 PF04551 GcpE protein At1D1108_22550 PF07690 Major Facilitator Superfamily At1D1108_22560 PF00455 DeoR C terminal sensor domain At1D1108_22560 PF08220 DeoR-like helix-turn-helix domain At1D1108_22570 PF00364 Biotin-requiring enzyme At1D1108_22570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_22570 PF00289 Biotin carboxylase, N-terminal domain At1D1108_22570 PF00682 HMGL-like At1D1108_22570 PF02436 Conserved carboxylase domain At1D1108_22570 PF02785 Biotin carboxylase C-terminal domain At1D1108_22580 PF00196 Bacterial regulatory proteins, luxR family At1D1108_22580 PF00072 Response regulator receiver domain At1D1108_22590 PF00005 ABC transporter At1D1108_22590 PF00664 ABC transporter transmembrane region At1D1108_22600 PF10091 Putative glucoamylase At1D1108_22600 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain At1D1108_22600 PF06165 Glycosyltransferase family 36 At1D1108_22610 PF07687 Peptidase dimerisation domain At1D1108_22610 PF01546 Peptidase family M20/M25/M40 At1D1108_22630 PF01266 FAD dependent oxidoreductase At1D1108_22640 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_22650 PF00920 Dehydratase family At1D1108_22660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1108_22660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_22670 PF01370 NAD dependent epimerase/dehydratase family At1D1108_22680 PF02913 FAD linked oxidases, C-terminal domain At1D1108_22680 PF01565 FAD binding domain At1D1108_22690 PF00392 Bacterial regulatory proteins, gntR family At1D1108_22690 PF07729 FCD domain At1D1108_22710 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1108_22720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_22730 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_22740 PF16177 Acetyl-coenzyme A synthetase N-terminus At1D1108_22740 PF00501 AMP-binding enzyme At1D1108_22740 PF13193 AMP-binding enzyme C-terminal domain At1D1108_22760 PF01168 Alanine racemase, N-terminal domain At1D1108_22770 PF13603 Leucyl-tRNA synthetase, Domain 2 At1D1108_22770 PF00133 tRNA synthetases class I (I, L, M and V) At1D1108_22770 PF08264 Anticodon-binding domain of tRNA At1D1108_22800 PF00037 4Fe-4S binding domain At1D1108_22800 PF11953 Domain of unknown function (DUF3470) At1D1108_22810 PF00579 tRNA synthetases class I (W and Y) At1D1108_22810 PF01479 S4 domain At1D1108_22830 PF01494 FAD binding domain At1D1108_22850 PF00543 Nitrogen regulatory protein P-II At1D1108_22860 PF00909 Ammonium Transporter Family At1D1108_22870 PF09397 Ftsk gamma domain At1D1108_22870 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At1D1108_22870 PF17854 FtsK alpha domain At1D1108_22870 PF01580 FtsK/SpoIIIE family At1D1108_22880 PF03548 Outer membrane lipoprotein carrier protein LolA At1D1108_22910 PF00072 Response regulator receiver domain At1D1108_22910 PF00486 Transcriptional regulatory protein, C terminal At1D1108_22930 PF02559 CarD-like/TRCF domain At1D1108_22940 PF05088 Bacterial NAD-glutamate dehydrogenase At1D1108_22950 PF11700 Vacuole effluxer Atg22 like At1D1108_22960 PF07879 PHB/PHA accumulation regulator DNA-binding domain At1D1108_22960 PF05233 PHB accumulation regulatory domain At1D1108_22970 PF00108 Thiolase, N-terminal domain At1D1108_22970 PF02803 Thiolase, C-terminal domain At1D1108_23000 PF00210 Ferritin-like domain At1D1108_23010 PF00293 NUDIX domain At1D1108_23030 PF13180 PDZ domain At1D1108_23030 PF03572 Peptidase family S41 At1D1108_23050 PF02590 Predicted SPOUT methyltransferase At1D1108_23070 PF01467 Cytidylyltransferase-like At1D1108_23080 PF00171 Aldehyde dehydrogenase family At1D1108_23090 PF01472 PUA domain At1D1108_23090 PF00696 Amino acid kinase family At1D1108_23100 PF01926 50S ribosome-binding GTPase At1D1108_23100 PF01018 GTP1/OBG At1D1108_23110 PF13302 Acetyltransferase (GNAT) domain At1D1108_23130 PF01016 Ribosomal L27 protein At1D1108_23140 PF00829 Ribosomal prokaryotic L21 protein At1D1108_23170 PF03328 HpcH/HpaI aldolase/citrate lyase family At1D1108_23190 PF00694 Aconitase C-terminal domain At1D1108_23200 PF00180 Isocitrate/isopropylmalate dehydrogenase At1D1108_23210 PF03150 Di-haem cytochrome c peroxidase At1D1108_23220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1108_23220 PF07685 CobB/CobQ-like glutamine amidotransferase domain At1D1108_23230 PF10414 Sirohaem synthase dimerisation region At1D1108_23230 PF14824 Sirohaem biosynthesis protein central At1D1108_23230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_23240 PF01888 CbiD At1D1108_23250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_23270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_23280 PF02571 Precorrin-6x reductase CbiJ/CobK At1D1108_23290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_23300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_23310 PF02570 Precorrin-8X methylmutase At1D1108_23320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At1D1108_23330 PF02514 CobN/Magnesium Chelatase At1D1108_23340 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1108_23340 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1108_23360 PF12557 Cob(I)alamin adenosyltransferase N terminal At1D1108_23360 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP At1D1108_23370 PF07685 CobB/CobQ-like glutamine amidotransferase domain At1D1108_23370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1108_23380 PF03186 CobD/Cbib protein At1D1108_23390 PF00155 Aminotransferase class I and II At1D1108_23400 PF13378 Enolase C-terminal domain-like At1D1108_23400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_23410 PF05336 L-rhamnose mutarotase At1D1108_23420 PF08125 Mannitol dehydrogenase C-terminal domain At1D1108_23420 PF01232 Mannitol dehydrogenase Rossmann domain At1D1108_23430 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_23430 PF00107 Zinc-binding dehydrogenase At1D1108_23450 PF00248 Aldo/keto reductase family At1D1108_23470 PF02653 Branched-chain amino acid transport system / permease component At1D1108_23480 PF00005 ABC transporter At1D1108_23490 PF00392 Bacterial regulatory proteins, gntR family At1D1108_23490 PF07729 FCD domain At1D1108_23500 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At1D1108_23500 PF08666 SAF domain At1D1108_23510 PF02142 MGS-like domain At1D1108_23510 PF01808 AICARFT/IMPCHase bienzyme At1D1108_23530 PF01189 16S rRNA methyltransferase RsmB/F At1D1108_23530 PF01029 NusB family At1D1108_23540 PF01435 Peptidase family M48 At1D1108_23560 PF17762 HTH domain found in ParB protein At1D1108_23560 PF02195 ParB-like nuclease domain At1D1108_23570 PF13614 AAA domain At1D1108_23580 PF02527 rRNA small subunit methyltransferase G At1D1108_23590 PF13932 GidA associated domain At1D1108_23590 PF01134 Glucose inhibited division protein A At1D1108_23600 PF12631 MnmE helical domain At1D1108_23600 PF01926 50S ribosome-binding GTPase At1D1108_23600 PF10396 GTP-binding protein TrmE N-terminus At1D1108_23610 PF07498 Rho termination factor, N-terminal domain At1D1108_23610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1108_23610 PF07497 Rho termination factor, RNA-binding domain At1D1108_23630 PF01208 Uroporphyrinogen decarboxylase (URO-D) At1D1108_23640 PF03618 Kinase/pyrophosphorylase At1D1108_23650 PF02545 Maf-like protein At1D1108_23660 PF08501 Shikimate dehydrogenase substrate binding domain At1D1108_23660 PF01488 Shikimate / quinate 5-dehydrogenase At1D1108_23660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At1D1108_23670 PF01121 Dephospho-CoA kinase At1D1108_23680 PF00929 Exonuclease At1D1108_23690 PF02556 Preprotein translocase subunit SecB At1D1108_23700 PF04186 FxsA cytoplasmic membrane protein At1D1108_23720 PF03562 MltA specific insert domain At1D1108_23720 PF06725 3D domain At1D1108_23750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_23750 PF01751 Toprim domain At1D1108_23750 PF00204 DNA gyrase B At1D1108_23750 PF00986 DNA gyrase B subunit, carboxyl terminus At1D1108_23770 PF01557 Fumarylacetoacetate (FAA) hydrolase family At1D1108_23800 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase At1D1108_23810 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_23820 PF00290 Tryptophan synthase alpha chain At1D1108_23830 PF01039 Carboxyl transferase domain At1D1108_23840 PF08245 Mur ligase middle domain At1D1108_23850 PF00085 Thioredoxin At1D1108_23860 PF00580 UvrD/REP helicase N-terminal domain At1D1108_23860 PF12705 PD-(D/E)XK nuclease superfamily At1D1108_23860 PF13361 UvrD-like helicase C-terminal domain At1D1108_23880 PF12804 MobA-like NTP transferase domain At1D1108_23890 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE At1D1108_23900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_23900 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_23910 PF05221 S-adenosyl-L-homocysteine hydrolase At1D1108_23910 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain At1D1108_23920 PF00381 PTS HPr component phosphorylation site At1D1108_23930 PF03830 PTS system sorbose subfamily IIB component At1D1108_23930 PF03610 PTS system fructose IIA component At1D1108_23940 PF07475 HPr Serine kinase C-terminal domain At1D1108_23940 PF02603 HPr Serine kinase N terminus At1D1108_23950 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_23950 PF00672 HAMP domain At1D1108_23950 PF13756 Stimulus-sensing domain At1D1108_23950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_23950 PF13755 Sensor N-terminal transmembrane domain At1D1108_23960 PF00486 Transcriptional regulatory protein, C terminal At1D1108_23960 PF00072 Response regulator receiver domain At1D1108_23970 PF01293 Phosphoenolpyruvate carboxykinase At1D1108_23980 PF00472 RF-1 domain At1D1108_23990 PF04972 BON domain At1D1108_23990 PF01476 LysM domain At1D1108_24000 PF00485 Phosphoribulokinase / Uridine kinase family At1D1108_24010 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase At1D1108_24020 PF00977 Histidine biosynthesis protein At1D1108_24030 PF00977 Histidine biosynthesis protein At1D1108_24040 PF00117 Glutamine amidotransferase class-I At1D1108_24060 PF00475 Imidazoleglycerol-phosphate dehydratase At1D1108_24070 PF00227 Proteasome subunit At1D1108_24080 PF07724 AAA domain (Cdc48 subfamily) At1D1108_24080 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1108_24080 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_24100 PF01274 Malate synthase At1D1108_24130 PF00072 Response regulator receiver domain At1D1108_24140 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_24140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_24150 PF08482 ATP-dependent helicase C-terminal At1D1108_24150 PF00271 Helicase conserved C-terminal domain At1D1108_24150 PF04408 Helicase associated domain (HA2) At1D1108_24150 PF00270 DEAD/DEAH box helicase At1D1108_24160 PF09382 RQC domain At1D1108_24160 PF00570 HRDC domain At1D1108_24160 PF16124 RecQ zinc-binding At1D1108_24160 PF00271 Helicase conserved C-terminal domain At1D1108_24160 PF00270 DEAD/DEAH box helicase At1D1108_24170 PF00480 ROK family At1D1108_24180 PF13407 Periplasmic binding protein domain At1D1108_24190 PF02653 Branched-chain amino acid transport system / permease component At1D1108_24200 PF00005 ABC transporter At1D1108_24210 PF00485 Phosphoribulokinase / Uridine kinase family At1D1108_24220 PF00462 Glutaredoxin At1D1108_24230 PF07972 NrdI Flavodoxin like At1D1108_24240 PF08343 Ribonucleotide reductase N-terminal At1D1108_24240 PF02867 Ribonucleotide reductase, barrel domain At1D1108_24240 PF00317 Ribonucleotide reductase, all-alpha domain At1D1108_24250 PF00268 Ribonucleotide reductase, small chain At1D1108_24270 PF02463 RecF/RecN/SMC N terminal domain At1D1108_24280 PF00899 ThiF family At1D1108_24280 PF00581 Rhodanese-like domain At1D1108_24300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_24300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_24320 PF00294 pfkB family carbohydrate kinase At1D1108_24340 PF05175 Methyltransferase small domain At1D1108_24340 PF08468 Methyltransferase small domain N-terminal At1D1108_24350 PF01138 3' exoribonuclease family, domain 1 At1D1108_24350 PF03725 3' exoribonuclease family, domain 2 At1D1108_24350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain At1D1108_24350 PF00575 S1 RNA binding domain At1D1108_24350 PF00013 KH domain At1D1108_24360 PF00312 Ribosomal protein S15 At1D1108_24370 PF09157 Pseudouridine synthase II TruB, C-terminal At1D1108_24370 PF01509 TruB family pseudouridylate synthase (N terminal domain) At1D1108_24370 PF16198 tRNA pseudouridylate synthase B C-terminal domain At1D1108_24380 PF02033 Ribosome-binding factor A At1D1108_24390 PF00009 Elongation factor Tu GTP binding domain At1D1108_24390 PF11987 Translation-initiation factor 2 At1D1108_24390 PF04760 Translation initiation factor IF-2, N-terminal region At1D1108_24390 PF08364 Bacterial translation initiation factor IF-2 associated region At1D1108_24390 PF03144 Elongation factor Tu domain 2 At1D1108_24410 PF13184 NusA-like KH domain At1D1108_24410 PF08529 NusA N-terminal domain At1D1108_24410 PF00575 S1 RNA binding domain At1D1108_24420 PF02576 RimP N-terminal domain At1D1108_24420 PF17384 RimP C-terminal SH3 domain At1D1108_24430 PF05977 Transmembrane secretion effector At1D1108_24440 PF13406 Transglycosylase SLT domain At1D1108_24450 PF02132 RecR protein At1D1108_24450 PF13662 Toprim domain At1D1108_24470 PF02575 YbaB/EbfC DNA-binding family At1D1108_24480 PF12169 DNA polymerase III subunits gamma and tau domain III At1D1108_24480 PF12170 DNA polymerase III tau subunit V interacting with alpha At1D1108_24480 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding At1D1108_24500 PF00293 NUDIX domain At1D1108_24500 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain At1D1108_24500 PF09297 NADH pyrophosphatase zinc ribbon domain At1D1108_24510 PF00800 Prephenate dehydratase At1D1108_24510 PF01817 Chorismate mutase type II At1D1108_24520 PF02348 Cytidylyltransferase At1D1108_24530 PF00034 Cytochrome c At1D1108_24540 PF02397 Bacterial sugar transferase At1D1108_24550 PF00912 Transglycosylase At1D1108_24550 PF00905 Penicillin binding protein transpeptidase domain At1D1108_24560 PF04073 Aminoacyl-tRNA editing domain At1D1108_24570 PF00313 'Cold-shock' DNA-binding domain At1D1108_24580 PF01546 Peptidase family M20/M25/M40 At1D1108_24580 PF07687 Peptidase dimerisation domain At1D1108_24590 PF01047 MarR family At1D1108_24600 PF01612 3'-5' exonuclease At1D1108_24600 PF01367 5'-3' exonuclease, C-terminal SAM fold At1D1108_24600 PF00476 DNA polymerase family A At1D1108_24600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain At1D1108_24620 PF01783 Ribosomal L32p protein family At1D1108_24630 PF02743 Cache domain At1D1108_24630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_24630 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_24640 PF02954 Bacterial regulatory protein, Fis family At1D1108_24640 PF00072 Response regulator receiver domain At1D1108_24640 PF00158 Sigma-54 interaction domain At1D1108_24650 PF03401 Tripartite tricarboxylate transporter family receptor At1D1108_24660 PF07331 Tripartite tricarboxylate transporter TctB family At1D1108_24670 PF01970 Tripartite tricarboxylate transporter TctA family At1D1108_24680 PF04102 SlyX At1D1108_24700 PF00226 DnaJ domain At1D1108_24700 PF01556 DnaJ C terminal domain At1D1108_24700 PF00684 DnaJ central domain At1D1108_24710 PF00012 Hsp70 protein At1D1108_24730 PF01625 Peptide methionine sulfoxide reductase At1D1108_24780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At1D1108_24790 PF01048 Phosphorylase superfamily At1D1108_24800 PF01791 DeoC/LacD family aldolase At1D1108_24810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain At1D1108_24810 PF00591 Glycosyl transferase family, a/b domain At1D1108_24810 PF02885 Glycosyl transferase family, helical bundle domain At1D1108_24840 PF00962 Adenosine/AMP deaminase At1D1108_24850 PF01676 Metalloenzyme superfamily At1D1108_24870 PF03626 Prokaryotic Cytochrome C oxidase subunit IV At1D1108_24880 PF00510 Cytochrome c oxidase subunit III At1D1108_24890 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1108_24900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At1D1108_24900 PF06481 COX Aromatic Rich Motif At1D1108_24910 PF00083 Sugar (and other) transporter At1D1108_24910 PF07690 Major Facilitator Superfamily At1D1108_24920 PF01493 GXGXG motif At1D1108_24920 PF04898 Glutamate synthase central domain At1D1108_24920 PF00310 Glutamine amidotransferases class-II At1D1108_24920 PF01645 Conserved region in glutamate synthase At1D1108_24930 PF00258 Flavodoxin At1D1108_24930 PF00667 FAD binding domain At1D1108_24930 PF00175 Oxidoreductase NAD-binding domain At1D1108_24970 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1108_24970 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1108_24980 PF07977 FabA-like domain At1D1108_25010 PF03458 UPF0126 domain At1D1108_25030 PF06912 Protein of unknown function (DUF1275) At1D1108_25050 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25060 PF00005 ABC transporter At1D1108_25070 PF07702 UTRA domain At1D1108_25070 PF00392 Bacterial regulatory proteins, gntR family At1D1108_25080 PF01618 MotA/TolQ/ExbB proton channel family At1D1108_25090 PF02472 Biopolymer transport protein ExbD/TolR At1D1108_25120 PF02615 Malate/L-lactate dehydrogenase At1D1108_25150 PF00625 Guanylate kinase At1D1108_25160 PF07969 Amidohydrolase family At1D1108_25170 PF06299 Protein of unknown function (DUF1045) At1D1108_25180 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25190 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25210 PF00005 ABC transporter At1D1108_25230 PF00005 ABC transporter At1D1108_25240 PF00005 ABC transporter At1D1108_25250 PF06007 Phosphonate metabolism protein PhnJ At1D1108_25270 PF05861 Bacterial phosphonate metabolism protein (PhnI) At1D1108_25280 PF05845 Bacterial phosphonate metabolism protein (PhnH) At1D1108_25290 PF06754 Phosphonate metabolism protein PhnG At1D1108_25300 PF00392 Bacterial regulatory proteins, gntR family At1D1108_25300 PF07702 UTRA domain At1D1108_25310 PF05173 Dihydrodipicolinate reductase, C-terminus At1D1108_25310 PF01113 Dihydrodipicolinate reductase, N-terminus At1D1108_25320 PF02685 Glucokinase At1D1108_25330 PF02142 MGS-like domain At1D1108_25340 PF03411 Penicillin-insensitive murein endopeptidase At1D1108_25350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_25360 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25370 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25370 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_25380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_25380 PF00005 ABC transporter At1D1108_25390 PF01266 FAD dependent oxidoreductase At1D1108_25400 PF00120 Glutamine synthetase, catalytic domain At1D1108_25410 PF01266 FAD dependent oxidoreductase At1D1108_25430 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25440 PF00005 ABC transporter At1D1108_25450 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_25460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1108_25480 PF02082 Transcriptional regulator At1D1108_25490 PF13416 Bacterial extracellular solute-binding protein At1D1108_25500 PF00171 Aldehyde dehydrogenase family At1D1108_25520 PF03466 LysR substrate binding domain At1D1108_25520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_25530 PF00892 EamA-like transporter family At1D1108_25560 PF00877 NlpC/P60 family At1D1108_25580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain At1D1108_25580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family At1D1108_25590 PF00883 Cytosol aminopeptidase family, catalytic domain At1D1108_25590 PF02789 Cytosol aminopeptidase family, N-terminal domain At1D1108_25630 PF00437 Type II/IV secretion system protein At1D1108_25660 PF04972 BON domain At1D1108_25660 PF13629 Pilus formation protein N terminal region At1D1108_25660 PF00263 Bacterial type II and III secretion system protein At1D1108_25730 PF00117 Glutamine amidotransferase class-I At1D1108_25740 PF07411 Domain of unknown function (DUF1508) At1D1108_25750 PF01183 Glycosyl hydrolases family 25 At1D1108_25760 PF00892 EamA-like transporter family At1D1108_25770 PF00392 Bacterial regulatory proteins, gntR family At1D1108_25770 PF00155 Aminotransferase class I and II At1D1108_25830 PF06421 GTP-binding protein LepA C-terminus At1D1108_25830 PF00009 Elongation factor Tu GTP binding domain At1D1108_25830 PF03144 Elongation factor Tu domain 2 At1D1108_25830 PF00679 Elongation factor G C-terminus At1D1108_25840 PF00795 Carbon-nitrogen hydrolase At1D1108_25900 PF02311 AraC-like ligand binding domain At1D1108_25900 PF12833 Helix-turn-helix domain At1D1108_25910 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_25960 PF05198 Translation initiation factor IF-3, N-terminal domain At1D1108_25960 PF00707 Translation initiation factor IF-3, C-terminal domain At1D1108_25970 PF01632 Ribosomal protein L35 At1D1108_25980 PF00453 Ribosomal protein L20 At1D1108_26000 PF01409 tRNA synthetases class II core domain (F) At1D1108_26000 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain At1D1108_26010 PF01588 Putative tRNA binding domain At1D1108_26010 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain At1D1108_26010 PF03147 Ferredoxin-fold anticodon binding domain At1D1108_26010 PF03483 B3/4 domain At1D1108_26010 PF03484 tRNA synthetase B5 domain At1D1108_26020 PF00248 Aldo/keto reductase family At1D1108_26030 PF03466 LysR substrate binding domain At1D1108_26030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_26050 PF00248 Aldo/keto reductase family At1D1108_26060 PF01965 DJ-1/PfpI family At1D1108_26060 PF12833 Helix-turn-helix domain At1D1108_26080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_26080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_26110 PF02601 Exonuclease VII, large subunit At1D1108_26110 PF13742 OB-fold nucleic acid binding domain At1D1108_26120 PF13378 Enolase C-terminal domain-like At1D1108_26120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_26130 PF07729 FCD domain At1D1108_26130 PF00392 Bacterial regulatory proteins, gntR family At1D1108_26140 PF01047 MarR family At1D1108_26150 PF00892 EamA-like transporter family At1D1108_26160 PF02073 Thermophilic metalloprotease (M29) At1D1108_26170 PF04073 Aminoacyl-tRNA editing domain At1D1108_26180 PF03960 ArsC family At1D1108_26210 PF00117 Glutamine amidotransferase class-I At1D1108_26210 PF00958 GMP synthase C terminal domain At1D1108_26240 PF03073 TspO/MBR family At1D1108_26290 PF01029 NusB family At1D1108_26290 PF01189 16S rRNA methyltransferase RsmB/F At1D1108_26300 PF03330 Lytic transglycolase At1D1108_26320 PF08331 Domain of unknown function (DUF1730) At1D1108_26330 PF00043 Glutathione S-transferase, C-terminal domain At1D1108_26330 PF13417 Glutathione S-transferase, N-terminal domain At1D1108_26340 PF02673 Bacitracin resistance protein BacA At1D1108_26370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family At1D1108_26390 PF13649 Methyltransferase domain At1D1108_26400 PF02768 DNA polymerase III beta subunit, C-terminal domain At1D1108_26400 PF02767 DNA polymerase III beta subunit, central domain At1D1108_26400 PF00712 DNA polymerase III beta subunit, N-terminal domain At1D1108_26410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_26420 PF02021 Uncharacterised protein family UPF0102 At1D1108_26430 PF12464 Maltose acetyltransferase At1D1108_26430 PF14602 Hexapeptide repeat of succinyl-transferase At1D1108_26440 PF13416 Bacterial extracellular solute-binding protein At1D1108_26450 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_26460 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_26470 PF00005 ABC transporter At1D1108_26490 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At1D1108_26490 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At1D1108_26500 PF01078 Magnesium chelatase, subunit ChlI At1D1108_26500 PF13335 Magnesium chelatase, subunit ChlI C-terminal At1D1108_26510 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_26520 PF01810 LysE type translocator At1D1108_26530 PF00692 dUTPase At1D1108_26540 PF03144 Elongation factor Tu domain 2 At1D1108_26540 PF16658 Class II release factor RF3, C-terminal domain At1D1108_26540 PF00009 Elongation factor Tu GTP binding domain At1D1108_26550 PF02441 Flavoprotein At1D1108_26550 PF04127 DNA / pantothenate metabolism flavoprotein At1D1108_26580 PF03109 ABC1 family At1D1108_26590 PF01209 ubiE/COQ5 methyltransferase family At1D1108_26600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain At1D1108_26600 PF06827 Zinc finger found in FPG and IleRS At1D1108_26600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain At1D1108_26610 PF00378 Enoyl-CoA hydratase/isomerase At1D1108_26620 PF01649 Ribosomal protein S20 At1D1108_26690 PF13007 Transposase C of IS166 homeodomain At1D1108_26690 PF13817 IS66 C-terminal element At1D1108_26690 PF13005 zinc-finger binding domain of transposase IS66 At1D1108_26690 PF03050 Transposase IS66 family At1D1108_26720 PF02534 Type IV secretory system Conjugative DNA transfer At1D1108_26750 PF02371 Transposase IS116/IS110/IS902 family At1D1108_26750 PF01548 Transposase At1D1108_26760 PF17841 BID domain of Bartonella effector protein (Bep) At1D1108_26760 PF01443 Viral (Superfamily 1) RNA helicase At1D1108_26760 PF03389 MobA/MobL family At1D1108_26810 PF02384 N-6 DNA Methylase At1D1108_26820 PF04851 Type III restriction enzyme, res subunit At1D1108_26820 PF08463 EcoEI R protein C-terminal At1D1108_26820 PF00271 Helicase conserved C-terminal domain At1D1108_26820 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) At1D1108_26840 PF00145 C-5 cytosine-specific DNA methylase At1D1108_26920 PF07690 Major Facilitator Superfamily At1D1108_26960 PF17991 Thioredoxin like C-terminal domain At1D1108_26960 PF00578 AhpC/TSA family At1D1108_26960 PF02683 Cytochrome C biogenesis protein transmembrane region At1D1108_26980 PF00561 alpha/beta hydrolase fold At1D1108_26990 PF00486 Transcriptional regulatory protein, C terminal At1D1108_26990 PF00072 Response regulator receiver domain At1D1108_27000 PF00672 HAMP domain At1D1108_27000 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_27000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_27030 PF02566 OsmC-like protein At1D1108_27050 PF04199 Putative cyclase At1D1108_27060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_27070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1108_27070 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_27090 PF09339 IclR helix-turn-helix domain At1D1108_27090 PF01614 Bacterial transcriptional regulator At1D1108_27110 PF13193 AMP-binding enzyme C-terminal domain At1D1108_27110 PF00501 AMP-binding enzyme At1D1108_27160 PF01037 Lrp/AsnC ligand binding domain At1D1108_27170 PF02538 Hydantoinase B/oxoprolinase At1D1108_27180 PF01968 Hydantoinase/oxoprolinase At1D1108_27180 PF05378 Hydantoinase/oxoprolinase N-terminal region At1D1108_27220 PF05378 Hydantoinase/oxoprolinase N-terminal region At1D1108_27220 PF01968 Hydantoinase/oxoprolinase At1D1108_27230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_27240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27250 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_27250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27260 PF00005 ABC transporter At1D1108_27260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_27270 PF01266 FAD dependent oxidoreductase At1D1108_27280 PF10415 Fumarase C C-terminus At1D1108_27280 PF00206 Lyase At1D1108_27290 PF01266 FAD dependent oxidoreductase At1D1108_27300 PF00005 ABC transporter At1D1108_27310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27320 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27330 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_27350 PF00300 Histidine phosphatase superfamily (branch 1) At1D1108_27350 PF00106 short chain dehydrogenase At1D1108_27360 PF01266 FAD dependent oxidoreductase At1D1108_27370 PF07729 FCD domain At1D1108_27370 PF00392 Bacterial regulatory proteins, gntR family At1D1108_27380 PF00005 ABC transporter At1D1108_27380 PF17912 MalK OB fold domain At1D1108_27390 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27410 PF01547 Bacterial extracellular solute-binding protein At1D1108_27420 PF07940 Heparinase II/III-like protein At1D1108_27420 PF16889 Heparinase II/III N-terminus At1D1108_27450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_27450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_27470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_27470 PF13378 Enolase C-terminal domain-like At1D1108_27490 PF00011 Hsp20/alpha crystallin family At1D1108_27510 PF13439 Glycosyltransferase Family 4 At1D1108_27510 PF00534 Glycosyl transferases group 1 At1D1108_27520 PF00534 Glycosyl transferases group 1 At1D1108_27520 PF13439 Glycosyltransferase Family 4 At1D1108_27560 PF00953 Glycosyl transferase family 4 At1D1108_27580 PF00534 Glycosyl transferases group 1 At1D1108_27580 PF13439 Glycosyltransferase Family 4 At1D1108_27610 PF00535 Glycosyl transferase family 2 At1D1108_27620 PF03705 CheR methyltransferase, all-alpha domain At1D1108_27620 PF01739 CheR methyltransferase, SAM binding domain At1D1108_27620 PF01339 CheB methylesterase At1D1108_27620 PF08448 PAS fold At1D1108_27630 PF00196 Bacterial regulatory proteins, luxR family At1D1108_27630 PF00072 Response regulator receiver domain At1D1108_27640 PF00202 Aminotransferase class-III At1D1108_27650 PF01370 NAD dependent epimerase/dehydratase family At1D1108_27660 PF16254 Domain of unknown function (DUF4910) At1D1108_27660 PF16221 winged helix-turn-helix At1D1108_27660 PF09940 Domain of unknown function (DUF2172) At1D1108_27670 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase At1D1108_27680 PF08484 C-methyltransferase C-terminal domain At1D1108_27680 PF08421 Putative zinc binding domain At1D1108_27690 PF00483 Nucleotidyl transferase At1D1108_27700 PF02585 GlcNAc-PI de-N-acetylase At1D1108_27710 PF00196 Bacterial regulatory proteins, luxR family At1D1108_27710 PF00072 Response regulator receiver domain At1D1108_27750 PF12708 Pectate lyase superfamily protein At1D1108_27750 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At1D1108_27750 PF13229 Right handed beta helix region At1D1108_27760 PF01370 NAD dependent epimerase/dehydratase family At1D1108_27770 PF16363 GDP-mannose 4,6 dehydratase At1D1108_27790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_27790 PF03466 LysR substrate binding domain At1D1108_27800 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At1D1108_27810 PF07690 Major Facilitator Superfamily At1D1108_27840 PF00005 ABC transporter At1D1108_27840 PF06472 ABC transporter transmembrane region 2 At1D1108_27850 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_27850 PF08448 PAS fold At1D1108_27870 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At1D1108_27870 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At1D1108_27880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_27880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At1D1108_27890 PF00723 Glycosyl hydrolases family 15 At1D1108_27890 PF09137 Glucodextranase, domain N At1D1108_27900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_27900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_27910 PF04324 BFD-like [2Fe-2S] binding domain At1D1108_27910 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_27920 PF01266 FAD dependent oxidoreductase At1D1108_27920 PF04324 BFD-like [2Fe-2S] binding domain At1D1108_27930 PF05985 Ethanolamine ammonia-lyase light chain (EutC) At1D1108_27940 PF06751 Ethanolamine ammonia lyase large subunit (EutB) At1D1108_27950 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27960 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_27970 PF00005 ABC transporter At1D1108_27970 PF08402 TOBE domain At1D1108_28000 PF00795 Carbon-nitrogen hydrolase At1D1108_28010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_28010 PF03466 LysR substrate binding domain At1D1108_28030 PF01266 FAD dependent oxidoreductase At1D1108_28040 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_28040 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28050 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_28070 PF01266 FAD dependent oxidoreductase At1D1108_28080 PF00300 Histidine phosphatase superfamily (branch 1) At1D1108_28080 PF00106 short chain dehydrogenase At1D1108_28100 PF00005 ABC transporter At1D1108_28100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_28120 PF01037 Lrp/AsnC ligand binding domain At1D1108_28130 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1108_28150 PF07690 Major Facilitator Superfamily At1D1108_28160 PF03466 LysR substrate binding domain At1D1108_28160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_28200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_28200 PF03466 LysR substrate binding domain At1D1108_28220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_28230 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28250 PF00005 ABC transporter At1D1108_28250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_28260 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain At1D1108_28260 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At1D1108_28260 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal At1D1108_28270 PF00313 'Cold-shock' DNA-binding domain At1D1108_28290 PF00158 Sigma-54 interaction domain At1D1108_28290 PF00072 Response regulator receiver domain At1D1108_28290 PF02954 Bacterial regulatory protein, Fis family At1D1108_28300 PF00072 Response regulator receiver domain At1D1108_28310 PF18415 Histidine kinase receptor ArcB trans-membrane domain At1D1108_28310 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_28310 PF00989 PAS fold At1D1108_28310 PF01627 Hpt domain At1D1108_28310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_28310 PF00072 Response regulator receiver domain At1D1108_28320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_28320 PF00005 ABC transporter At1D1108_28350 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_28370 PF00392 Bacterial regulatory proteins, gntR family At1D1108_28370 PF07729 FCD domain At1D1108_28380 PF00144 Beta-lactamase At1D1108_28390 PF03466 LysR substrate binding domain At1D1108_28390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_28450 PF08281 Sigma-70, region 4 At1D1108_28450 PF04542 Sigma-70 region 2 At1D1108_28460 PF01177 Asp/Glu/Hydantoin racemase At1D1108_28470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28500 PF00005 ABC transporter At1D1108_28500 PF08402 TOBE domain At1D1108_28510 PF00005 ABC transporter At1D1108_28520 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28530 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28540 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_28550 PF00392 Bacterial regulatory proteins, gntR family At1D1108_28550 PF07729 FCD domain At1D1108_28570 PF00743 Flavin-binding monooxygenase-like At1D1108_28580 PF00107 Zinc-binding dehydrogenase At1D1108_28580 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_28590 PF01590 GAF domain At1D1108_28590 PF00158 Sigma-54 interaction domain At1D1108_28590 PF02954 Bacterial regulatory protein, Fis family At1D1108_28620 PF08447 PAS fold At1D1108_28620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_28620 PF13426 PAS domain At1D1108_28650 PF13416 Bacterial extracellular solute-binding protein At1D1108_28660 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28680 PF00005 ABC transporter At1D1108_28680 PF17912 MalK OB fold domain At1D1108_28690 PF00296 Luciferase-like monooxygenase At1D1108_28700 PF09084 NMT1/THI5 like At1D1108_28710 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28720 PF00005 ABC transporter At1D1108_28730 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28740 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28760 PF17912 MalK OB fold domain At1D1108_28760 PF00005 ABC transporter At1D1108_28770 PF06964 Alpha-L-arabinofuranosidase C-terminal domain At1D1108_28800 PF00356 Bacterial regulatory proteins, lacI family At1D1108_28820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_28820 PF01842 ACT domain At1D1108_28820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_28830 PF01261 Xylose isomerase-like TIM barrel At1D1108_28840 PF03459 TOBE domain At1D1108_28840 PF00005 ABC transporter At1D1108_28840 PF17912 MalK OB fold domain At1D1108_28850 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28860 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_28870 PF13416 Bacterial extracellular solute-binding protein At1D1108_28880 PF17938 Tetracyclin repressor-like, C-terminal domain At1D1108_28880 PF00440 Bacterial regulatory proteins, tetR family At1D1108_28890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_28890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_28920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_28920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_28940 PF00313 'Cold-shock' DNA-binding domain At1D1108_28960 PF01165 Ribosomal protein S21 At1D1108_29030 PF00550 Phosphopantetheine attachment site At1D1108_29040 PF12704 MacB-like periplasmic core domain At1D1108_29040 PF02687 FtsX-like permease family At1D1108_29040 PF00005 ABC transporter At1D1108_29050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1108_29080 PF00072 Response regulator receiver domain At1D1108_29080 PF00486 Transcriptional regulatory protein, C terminal At1D1108_29090 PF00672 HAMP domain At1D1108_29090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_29090 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_29100 PF07470 Glycosyl Hydrolase Family 88 At1D1108_29110 PF00295 Glycosyl hydrolases family 28 At1D1108_29140 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29150 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29160 PF12833 Helix-turn-helix domain At1D1108_29160 PF02311 AraC-like ligand binding domain At1D1108_29170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_29190 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_29200 PF04909 Amidohydrolase At1D1108_29210 PF13378 Enolase C-terminal domain-like At1D1108_29210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_29220 PF00701 Dihydrodipicolinate synthetase family At1D1108_29240 PF04962 KduI/IolB family At1D1108_29250 PF01370 NAD dependent epimerase/dehydratase family At1D1108_29260 PF00392 Bacterial regulatory proteins, gntR family At1D1108_29260 PF07729 FCD domain At1D1108_29290 PF00248 Aldo/keto reductase family At1D1108_29300 PF00005 ABC transporter At1D1108_29300 PF17912 MalK OB fold domain At1D1108_29310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29320 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29350 PF02311 AraC-like ligand binding domain At1D1108_29350 PF12833 Helix-turn-helix domain At1D1108_29360 PF07690 Major Facilitator Superfamily At1D1108_29370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_29370 PF03466 LysR substrate binding domain At1D1108_29380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_29400 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_29410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1108_29410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_29440 PF00356 Bacterial regulatory proteins, lacI family At1D1108_29450 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_29450 PF16912 Glucose dehydrogenase C-terminus At1D1108_29480 PF00294 pfkB family carbohydrate kinase At1D1108_29490 PF08013 Tagatose 6 phosphate kinase At1D1108_29500 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29510 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29520 PF00005 ABC transporter At1D1108_29520 PF08402 TOBE domain At1D1108_29530 PF17912 MalK OB fold domain At1D1108_29530 PF00005 ABC transporter At1D1108_29540 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29570 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1108_29590 PF01297 Zinc-uptake complex component A periplasmic At1D1108_29600 PF00950 ABC 3 transport family At1D1108_29610 PF00005 ABC transporter At1D1108_29620 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1108_29620 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1108_29650 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1108_29650 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1108_29660 PF13416 Bacterial extracellular solute-binding protein At1D1108_29670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29680 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29690 PF00005 ABC transporter At1D1108_29690 PF08402 TOBE domain At1D1108_29710 PF03922 OmpW family At1D1108_29760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1108_29760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At1D1108_29770 PF03466 LysR substrate binding domain At1D1108_29770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_29780 PF13407 Periplasmic binding protein domain At1D1108_29790 PF02653 Branched-chain amino acid transport system / permease component At1D1108_29800 PF00005 ABC transporter At1D1108_29810 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_29810 PF13426 PAS domain At1D1108_29810 PF08448 PAS fold At1D1108_29810 PF00563 EAL domain At1D1108_29810 PF05231 MASE1 At1D1108_29810 PF08447 PAS fold At1D1108_29820 PF05899 Protein of unknown function (DUF861) At1D1108_29820 PF07883 Cupin domain At1D1108_29840 PF08447 PAS fold At1D1108_29840 PF08448 PAS fold At1D1108_29840 PF00563 EAL domain At1D1108_29840 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_29850 PF02615 Malate/L-lactate dehydrogenase At1D1108_29860 PF17854 FtsK alpha domain At1D1108_29860 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At1D1108_29860 PF09397 Ftsk gamma domain At1D1108_29860 PF01580 FtsK/SpoIIIE family At1D1108_29870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_29880 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29890 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_29890 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_29900 PF00005 ABC transporter At1D1108_29900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_29910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_29910 PF00005 ABC transporter At1D1108_29920 PF00266 Aminotransferase class-V At1D1108_29940 PF00920 Dehydratase family At1D1108_29950 PF13407 Periplasmic binding protein domain At1D1108_29960 PF00005 ABC transporter At1D1108_29970 PF02653 Branched-chain amino acid transport system / permease component At1D1108_29980 PF02653 Branched-chain amino acid transport system / permease component At1D1108_29990 PF00392 Bacterial regulatory proteins, gntR family At1D1108_29990 PF07729 FCD domain At1D1108_30000 PF07690 Major Facilitator Superfamily At1D1108_30020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1108_30020 PF14579 Helix-hairpin-helix motif At1D1108_30020 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1108_30020 PF02811 PHP domain At1D1108_30020 PF01336 OB-fold nucleic acid binding domain At1D1108_30050 PF13660 Domain of unknown function (DUF4147) At1D1108_30050 PF05161 MOFRL family At1D1108_30070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_30070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_30090 PF17912 MalK OB fold domain At1D1108_30090 PF00005 ABC transporter At1D1108_30090 PF03459 TOBE domain At1D1108_30100 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30110 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30120 PF01547 Bacterial extracellular solute-binding protein At1D1108_30140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_30160 PF01425 Amidase At1D1108_30170 PF00563 EAL domain At1D1108_30170 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_30170 PF08447 PAS fold At1D1108_30170 PF08448 PAS fold At1D1108_30200 PF03776 Septum formation topological specificity factor MinE At1D1108_30210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1108_30220 PF03775 Septum formation inhibitor MinC, C-terminal domain At1D1108_30220 PF05209 Septum formation inhibitor MinC, N-terminal domain At1D1108_30230 PF13419 Haloacid dehalogenase-like hydrolase At1D1108_30240 PF00392 Bacterial regulatory proteins, gntR family At1D1108_30240 PF07729 FCD domain At1D1108_30250 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_30270 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_30280 PF00107 Zinc-binding dehydrogenase At1D1108_30280 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_30290 PF03786 D-mannonate dehydratase (UxuA) At1D1108_30310 PF00171 Aldehyde dehydrogenase family At1D1108_30320 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_30330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_30340 PF00296 Luciferase-like monooxygenase At1D1108_30370 PF00043 Glutathione S-transferase, C-terminal domain At1D1108_30370 PF02798 Glutathione S-transferase, N-terminal domain At1D1108_30380 PF00005 ABC transporter At1D1108_30380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_30390 PF03841 L-seryl-tRNA selenium transferase At1D1108_30420 PF01979 Amidohydrolase family At1D1108_30430 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_30430 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30440 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_30460 PF00534 Glycosyl transferases group 1 At1D1108_30460 PF13439 Glycosyltransferase Family 4 At1D1108_30490 PF02563 Polysaccharide biosynthesis/export protein At1D1108_30500 PF13533 Biotin-lipoyl like At1D1108_30510 PF00873 AcrB/AcrD/AcrF family At1D1108_30540 PF01613 Flavin reductase like domain At1D1108_30550 PF00248 Aldo/keto reductase family At1D1108_30560 PF00296 Luciferase-like monooxygenase At1D1108_30580 PF08402 TOBE domain At1D1108_30580 PF00005 ABC transporter At1D1108_30590 PF01547 Bacterial extracellular solute-binding protein At1D1108_30600 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30610 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30620 PF01055 Glycosyl hydrolases family 31 At1D1108_30640 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_30650 PF09084 NMT1/THI5 like At1D1108_30660 PF02110 Hydroxyethylthiazole kinase family At1D1108_30670 PF02581 Thiamine monophosphate synthase At1D1108_30680 PF08543 Phosphomethylpyrimidine kinase At1D1108_30700 PF01037 Lrp/AsnC ligand binding domain At1D1108_30710 PF00842 Alanine racemase, C-terminal domain At1D1108_30710 PF01168 Alanine racemase, N-terminal domain At1D1108_30720 PF01266 FAD dependent oxidoreductase At1D1108_30750 PF00158 Sigma-54 interaction domain At1D1108_30750 PF00072 Response regulator receiver domain At1D1108_30750 PF02954 Bacterial regulatory protein, Fis family At1D1108_30760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_30760 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_30770 PF00375 Sodium:dicarboxylate symporter family At1D1108_30780 PF00892 EamA-like transporter family At1D1108_30790 PF00202 Aminotransferase class-III At1D1108_30840 PF01270 Glycosyl hydrolases family 8 At1D1108_30860 PF00535 Glycosyl transferase family 2 At1D1108_30860 PF07238 PilZ domain At1D1108_30860 PF03552 Cellulose synthase At1D1108_30920 PF16363 GDP-mannose 4,6 dehydratase At1D1108_30930 PF16363 GDP-mannose 4,6 dehydratase At1D1108_30950 PF00196 Bacterial regulatory proteins, luxR family At1D1108_30980 PF00005 ABC transporter At1D1108_30980 PF00664 ABC transporter transmembrane region At1D1108_30990 PF00529 HlyD membrane-fusion protein of T1SS At1D1108_31020 PF02563 Polysaccharide biosynthesis/export protein At1D1108_31030 PF02397 Bacterial sugar transferase At1D1108_31050 PF00202 Aminotransferase class-III At1D1108_31060 PF00672 HAMP domain At1D1108_31060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_31070 PF03734 L,D-transpeptidase catalytic domain At1D1108_31070 PF17969 L,D-transpeptidase C-terminal domain At1D1108_31110 PF02245 Methylpurine-DNA glycosylase (MPG) At1D1108_31140 PF00356 Bacterial regulatory proteins, lacI family At1D1108_31150 PF01547 Bacterial extracellular solute-binding protein At1D1108_31160 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31170 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31180 PF03459 TOBE domain At1D1108_31180 PF17912 MalK OB fold domain At1D1108_31180 PF00005 ABC transporter At1D1108_31200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_31200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_31210 PF04055 Radical SAM superfamily At1D1108_31220 PF01242 6-pyruvoyl tetrahydropterin synthase At1D1108_31230 PF06508 Queuosine biosynthesis protein QueC At1D1108_31260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_31260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_31280 PF00005 ABC transporter At1D1108_31280 PF17912 MalK OB fold domain At1D1108_31290 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31310 PF01547 Bacterial extracellular solute-binding protein At1D1108_31330 PF00483 Nucleotidyl transferase At1D1108_31330 PF01050 Mannose-6-phosphate isomerase At1D1108_31340 PF01011 PQQ enzyme repeat At1D1108_31360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_31360 PF03466 LysR substrate binding domain At1D1108_31370 PF01515 Phosphate acetyl/butaryl transferase At1D1108_31370 PF00390 Malic enzyme, N-terminal domain At1D1108_31370 PF03949 Malic enzyme, NAD binding domain At1D1108_31390 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_31400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31410 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31420 PF00005 ABC transporter At1D1108_31430 PF03972 MmgE/PrpD family At1D1108_31450 PF08447 PAS fold At1D1108_31450 PF13426 PAS domain At1D1108_31450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_31460 PF01266 FAD dependent oxidoreductase At1D1108_31490 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1108_31500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_31510 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_31520 PF07722 Peptidase C26 At1D1108_31530 PF02653 Branched-chain amino acid transport system / permease component At1D1108_31540 PF00005 ABC transporter At1D1108_31550 PF13407 Periplasmic binding protein domain At1D1108_31560 PF01546 Peptidase family M20/M25/M40 At1D1108_31570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_31590 PF00005 ABC transporter At1D1108_31590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_31610 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31620 PF03466 LysR substrate binding domain At1D1108_31620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_31630 PF01112 Asparaginase At1D1108_31660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_31690 PF00005 ABC transporter At1D1108_31690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_31710 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_31720 PF00072 Response regulator receiver domain At1D1108_31720 PF00196 Bacterial regulatory proteins, luxR family At1D1108_31730 PF00529 HlyD membrane-fusion protein of T1SS At1D1108_31730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1108_31740 PF00005 ABC transporter At1D1108_31740 PF00664 ABC transporter transmembrane region At1D1108_31780 PF08281 Sigma-70, region 4 At1D1108_31780 PF04542 Sigma-70 region 2 At1D1108_31780 PF12680 SnoaL-like domain At1D1108_31790 PF00005 ABC transporter At1D1108_31800 PF01032 FecCD transport family At1D1108_31830 PF01209 ubiE/COQ5 methyltransferase family At1D1108_31840 PF00127 Copper binding proteins, plastocyanin/azurin family At1D1108_31850 PF00005 ABC transporter At1D1108_31860 PF01032 FecCD transport family At1D1108_31890 PF07687 Peptidase dimerisation domain At1D1108_31890 PF01546 Peptidase family M20/M25/M40 At1D1108_31900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_31930 PF00171 Aldehyde dehydrogenase family At1D1108_31940 PF00180 Isocitrate/isopropylmalate dehydrogenase At1D1108_31950 PF00171 Aldehyde dehydrogenase family At1D1108_31960 PF01266 FAD dependent oxidoreductase At1D1108_31990 PF00202 Aminotransferase class-III At1D1108_32010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_32020 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32030 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32030 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_32040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_32040 PF00005 ABC transporter At1D1108_32050 PF01037 Lrp/AsnC ligand binding domain At1D1108_32060 PF01266 FAD dependent oxidoreductase At1D1108_32090 PF00005 ABC transporter At1D1108_32110 PF07687 Peptidase dimerisation domain At1D1108_32110 PF01546 Peptidase family M20/M25/M40 At1D1108_32120 PF00296 Luciferase-like monooxygenase At1D1108_32130 PF00296 Luciferase-like monooxygenase At1D1108_32140 PF02082 Transcriptional regulator At1D1108_32160 PF01613 Flavin reductase like domain At1D1108_32170 PF00296 Luciferase-like monooxygenase At1D1108_32200 PF00296 Luciferase-like monooxygenase At1D1108_32210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_32210 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_32210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_32230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_32240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_32260 PF00005 ABC transporter At1D1108_32270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_32270 PF00005 ABC transporter At1D1108_32280 PF00248 Aldo/keto reductase family At1D1108_32300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_32300 PF03466 LysR substrate binding domain At1D1108_32340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_32350 PF07687 Peptidase dimerisation domain At1D1108_32350 PF01546 Peptidase family M20/M25/M40 At1D1108_32360 PF00296 Luciferase-like monooxygenase At1D1108_32370 PF05368 NmrA-like family At1D1108_32400 PF00296 Luciferase-like monooxygenase At1D1108_32420 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_32420 PF13378 Enolase C-terminal domain-like At1D1108_32440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_32450 PF00005 ABC transporter At1D1108_32450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_32460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_32460 PF00005 ABC transporter At1D1108_32470 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_32470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32500 PF07729 FCD domain At1D1108_32500 PF00392 Bacterial regulatory proteins, gntR family At1D1108_32520 PF00561 alpha/beta hydrolase fold At1D1108_32530 PF00106 short chain dehydrogenase At1D1108_32550 PF04273 Putative phosphatase (DUF442) At1D1108_32550 PF00753 Metallo-beta-lactamase superfamily At1D1108_32570 PF04143 Sulphur transport At1D1108_32590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) At1D1108_32590 PF01676 Metalloenzyme superfamily At1D1108_32600 PF00364 Biotin-requiring enzyme At1D1108_32600 PF02817 e3 binding domain At1D1108_32600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At1D1108_32610 PF02780 Transketolase, C-terminal domain At1D1108_32610 PF02779 Transketolase, pyrimidine binding domain At1D1108_32620 PF00676 Dehydrogenase E1 component At1D1108_32620 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal At1D1108_32630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_32630 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_32630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_32640 PF02803 Thiolase, C-terminal domain At1D1108_32640 PF00108 Thiolase, N-terminal domain At1D1108_32650 PF01037 Lrp/AsnC ligand binding domain At1D1108_32660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_32660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_32660 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_32670 PF01039 Carboxyl transferase domain At1D1108_32680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_32680 PF02785 Biotin carboxylase C-terminal domain At1D1108_32680 PF00289 Biotin carboxylase, N-terminal domain At1D1108_32680 PF00364 Biotin-requiring enzyme At1D1108_32690 PF00682 HMGL-like At1D1108_32700 PF00378 Enoyl-CoA hydratase/isomerase At1D1108_32710 PF02569 Pantoate-beta-alanine ligase At1D1108_32720 PF02548 Ketopantoate hydroxymethyltransferase At1D1108_32730 PF01261 Xylose isomerase-like TIM barrel At1D1108_32740 PF00596 Class II Aldolase and Adducin N-terminal domain At1D1108_32750 PF08220 DeoR-like helix-turn-helix domain At1D1108_32750 PF00455 DeoR C terminal sensor domain At1D1108_32760 PF13407 Periplasmic binding protein domain At1D1108_32770 PF00005 ABC transporter At1D1108_32780 PF02653 Branched-chain amino acid transport system / permease component At1D1108_32790 PF02653 Branched-chain amino acid transport system / permease component At1D1108_32800 PF05336 L-rhamnose mutarotase At1D1108_32820 PF00561 alpha/beta hydrolase fold At1D1108_32840 PF08447 PAS fold At1D1108_32840 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_32840 PF08448 PAS fold At1D1108_32840 PF00563 EAL domain At1D1108_32860 PF00171 Aldehyde dehydrogenase family At1D1108_32870 PF08713 DNA alkylation repair enzyme At1D1108_32880 PF00005 ABC transporter At1D1108_32890 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32900 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_32920 PF00378 Enoyl-CoA hydratase/isomerase At1D1108_32950 PF08241 Methyltransferase domain At1D1108_32970 PF00795 Carbon-nitrogen hydrolase At1D1108_32980 PF00462 Glutaredoxin At1D1108_33000 PF08241 Methyltransferase domain At1D1108_33030 PF00293 NUDIX domain At1D1108_33040 PF13508 Acetyltransferase (GNAT) domain At1D1108_33040 PF00583 Acetyltransferase (GNAT) family At1D1108_33050 PF01960 ArgJ family At1D1108_33070 PF07516 SecA Wing and Scaffold domain At1D1108_33070 PF02810 SEC-C motif At1D1108_33070 PF01043 SecA preprotein cross-linking domain At1D1108_33070 PF07517 SecA DEAD-like domain At1D1108_33090 PF01757 Acyltransferase family At1D1108_33190 PF01943 Polysaccharide biosynthesis protein At1D1108_33220 PF01757 Acyltransferase family At1D1108_33240 PF13614 AAA domain At1D1108_33280 PF00534 Glycosyl transferases group 1 At1D1108_33280 PF13439 Glycosyltransferase Family 4 At1D1108_33290 PF13439 Glycosyltransferase Family 4 At1D1108_33290 PF00534 Glycosyl transferases group 1 At1D1108_33320 PF03449 Transcription elongation factor, N-terminal At1D1108_33320 PF01272 Transcription elongation factor, GreA/GreB, C-term At1D1108_33330 PF00722 Glycosyl hydrolases family 16 At1D1108_33330 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At1D1108_33350 PF03009 Glycerophosphoryl diester phosphodiesterase family At1D1108_33360 PF00005 ABC transporter At1D1108_33360 PF17912 MalK OB fold domain At1D1108_33370 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_33380 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_33400 PF01047 MarR family At1D1108_33400 PF00480 ROK family At1D1108_33450 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding At1D1108_33480 PF01381 Helix-turn-helix At1D1108_33500 PF00005 ABC transporter At1D1108_33510 PF02653 Branched-chain amino acid transport system / permease component At1D1108_33520 PF13407 Periplasmic binding protein domain At1D1108_33540 PF01266 FAD dependent oxidoreductase At1D1108_33540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1108_33570 PF02785 Biotin carboxylase C-terminal domain At1D1108_33570 PF00364 Biotin-requiring enzyme At1D1108_33570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_33570 PF00289 Biotin carboxylase, N-terminal domain At1D1108_33590 PF02798 Glutathione S-transferase, N-terminal domain At1D1108_33600 PF01039 Carboxyl transferase domain At1D1108_33610 PF09856 Predicted transcriptional regulator (DUF2083) At1D1108_33610 PF06114 IrrE N-terminal-like domain At1D1108_33610 PF01381 Helix-turn-helix At1D1108_33620 PF12833 Helix-turn-helix domain At1D1108_33620 PF00730 HhH-GPD superfamily base excision DNA repair protein At1D1108_33620 PF06029 AlkA N-terminal domain At1D1108_33620 PF02805 Metal binding domain of Ada At1D1108_33630 PF00749 tRNA synthetases class I (E and Q), catalytic domain At1D1108_33650 PF00106 short chain dehydrogenase At1D1108_33670 PF01923 Cobalamin adenosyltransferase At1D1108_33690 PF01012 Electron transfer flavoprotein domain At1D1108_33700 PF01012 Electron transfer flavoprotein domain At1D1108_33700 PF00766 Electron transfer flavoprotein FAD-binding domain At1D1108_33710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At1D1108_33710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At1D1108_33720 PF08534 Redoxin At1D1108_33730 PF14698 Argininosuccinate lyase C-terminal At1D1108_33730 PF00206 Lyase At1D1108_33750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1108_33750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At1D1108_33770 PF00072 Response regulator receiver domain At1D1108_33780 PF00156 Phosphoribosyl transferase domain At1D1108_33800 PF00005 ABC transporter At1D1108_33840 PF04752 ChaC-like protein At1D1108_33870 PF02153 Prephenate dehydrogenase At1D1108_33880 PF00155 Aminotransferase class I and II At1D1108_33890 PF01209 ubiE/COQ5 methyltransferase family At1D1108_33900 PF16123 Hydroxyacylglutathione hydrolase C-terminus At1D1108_33900 PF00753 Metallo-beta-lactamase superfamily At1D1108_33940 PF02592 Putative vitamin uptake transporter At1D1108_33970 PF06213 Cobalamin biosynthesis protein CobT At1D1108_33970 PF11775 Cobalamin biosynthesis protein CobT VWA domain At1D1108_33980 PF08406 CbbQ/NirQ/NorQ C-terminal At1D1108_33980 PF07728 AAA domain (dynein-related subfamily) At1D1108_33980 PF12556 Cobaltochelatase CobS subunit N terminal At1D1108_33990 PF00226 DnaJ domain At1D1108_34000 PF01722 BolA-like protein At1D1108_34010 PF01761 3-dehydroquinate synthase At1D1108_34020 PF01202 Shikimate kinase At1D1108_34040 PF02899 Phage integrase, N-terminal SAM-like domain At1D1108_34040 PF00589 Phage integrase family At1D1108_34050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit At1D1108_34060 PF03734 L,D-transpeptidase catalytic domain At1D1108_34070 PF01206 Sulfurtransferase TusA At1D1108_34080 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1108_34080 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1108_34090 PF00768 D-alanyl-D-alanine carboxypeptidase At1D1108_34090 PF07943 Penicillin-binding protein 5, C-terminal domain At1D1108_34100 PF07687 Peptidase dimerisation domain At1D1108_34100 PF01546 Peptidase family M20/M25/M40 At1D1108_34120 PF06832 Penicillin-Binding Protein C-terminus Family At1D1108_34120 PF00905 Penicillin binding protein transpeptidase domain At1D1108_34120 PF00912 Transglycosylase At1D1108_34130 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain At1D1108_34130 PF07678 A-macroglobulin TED domain At1D1108_34130 PF17962 Bacterial macroglobulin domain 6 At1D1108_34130 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain At1D1108_34130 PF11974 Bacterial alpha-2-macroglobulin MG3 domain At1D1108_34130 PF01835 MG2 domain At1D1108_34130 PF07703 Alpha-2-macroglobulin bait region domain At1D1108_34130 PF00207 Alpha-2-macroglobulin family At1D1108_34130 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain At1D1108_34140 PF03966 Trm112p-like protein At1D1108_34160 PF00085 Thioredoxin At1D1108_34260 PF01471 Putative peptidoglycan binding domain At1D1108_34260 PF01510 N-acetylmuramoyl-L-alanine amidase At1D1108_34490 PF00574 Clp protease At1D1108_34740 PF00436 Single-strand binding protein family At1D1108_34780 PF02767 DNA polymerase III beta subunit, central domain At1D1108_34780 PF02768 DNA polymerase III beta subunit, C-terminal domain At1D1108_34780 PF00712 DNA polymerase III beta subunit, N-terminal domain At1D1108_34860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_34860 PF01842 ACT domain At1D1108_34860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_34880 PF13505 Outer membrane protein beta-barrel domain At1D1108_34890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At1D1108_34890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At1D1108_34890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At1D1108_34890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At1D1108_34900 PF06480 FtsH Extracellular At1D1108_34900 PF17862 AAA+ lid domain At1D1108_34900 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_34900 PF01434 Peptidase family M41 At1D1108_34910 PF01171 PP-loop family At1D1108_34930 PF00691 OmpA family At1D1108_34940 PF04052 TolB amino-terminal domain At1D1108_34940 PF07676 WD40-like Beta Propeller Repeat At1D1108_34960 PF02472 Biopolymer transport protein ExbD/TolR At1D1108_34970 PF01618 MotA/TolQ/ExbB proton channel family At1D1108_34980 PF03061 Thioesterase superfamily At1D1108_34990 PF00293 NUDIX domain At1D1108_35000 PF00293 NUDIX domain At1D1108_35030 PF17864 RuvB AAA lid domain At1D1108_35030 PF05496 Holliday junction DNA helicase RuvB P-loop domain At1D1108_35030 PF05491 RuvB C-terminal winged helix domain At1D1108_35040 PF01330 RuvA N terminal domain At1D1108_35040 PF07499 RuvA, C-terminal domain At1D1108_35050 PF02075 Crossover junction endodeoxyribonuclease RuvC At1D1108_35060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_35060 PF00672 HAMP domain At1D1108_35070 PF00296 Luciferase-like monooxygenase At1D1108_35080 PF01709 Transcriptional regulator At1D1108_35110 PF13277 YmdB-like protein At1D1108_35130 PF03471 Transporter associated domain At1D1108_35130 PF01595 Cyclin M transmembrane N-terminal domain At1D1108_35130 PF00571 CBS domain At1D1108_35160 PF00456 Transketolase, thiamine diphosphate binding domain At1D1108_35160 PF02779 Transketolase, pyrimidine binding domain At1D1108_35160 PF02780 Transketolase, C-terminal domain At1D1108_35170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain At1D1108_35170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain At1D1108_35200 PF00999 Sodium/hydrogen exchanger family At1D1108_35200 PF03471 Transporter associated domain At1D1108_35210 PF00162 Phosphoglycerate kinase At1D1108_35220 PF00274 Fructose-bisphosphate aldolase class-I At1D1108_35270 PF01197 Ribosomal protein L31 At1D1108_35280 PF00664 ABC transporter transmembrane region At1D1108_35280 PF00005 ABC transporter At1D1108_35290 PF00890 FAD binding domain At1D1108_35300 PF01389 OmpA-like transmembrane domain At1D1108_35300 PF00691 OmpA family At1D1108_35320 PF00459 Inositol monophosphatase family At1D1108_35380 PF00731 AIR carboxylase At1D1108_35390 PF02222 ATP-grasp domain At1D1108_35390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain At1D1108_35400 PF00444 Ribosomal protein L36 At1D1108_35420 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) At1D1108_35460 PF02887 Pyruvate kinase, alpha/beta domain At1D1108_35460 PF00224 Pyruvate kinase, barrel domain At1D1108_35470 PF05951 Bacterial protein of unknown function (DUF882) At1D1108_35480 PF00158 Sigma-54 interaction domain At1D1108_35480 PF00072 Response regulator receiver domain At1D1108_35480 PF02954 Bacterial regulatory protein, Fis family At1D1108_35490 PF01432 Peptidase family M3 At1D1108_35490 PF08439 Oligopeptidase F At1D1108_35500 PF01063 Amino-transferase class IV At1D1108_35510 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_35510 PF08448 PAS fold At1D1108_35520 PF16653 Saccharopine dehydrogenase C-terminal domain At1D1108_35520 PF03435 Saccharopine dehydrogenase NADP binding domain At1D1108_35540 PF02872 5'-nucleotidase, C-terminal domain At1D1108_35540 PF00149 Calcineurin-like phosphoesterase At1D1108_35550 PF00762 Ferrochelatase At1D1108_35560 PF01145 SPFH domain / Band 7 family At1D1108_35560 PF16200 C-terminal region of band_7 At1D1108_35580 PF00571 CBS domain At1D1108_35580 PF01380 SIS domain At1D1108_35610 PF00483 Nucleotidyl transferase At1D1108_35620 PF13406 Transglycosylase SLT domain At1D1108_35640 PF00486 Transcriptional regulatory protein, C terminal At1D1108_35640 PF00072 Response regulator receiver domain At1D1108_35650 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_35650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_35650 PF00672 HAMP domain At1D1108_35660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster At1D1108_35660 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_35670 PF00310 Glutamine amidotransferases class-II At1D1108_35670 PF04898 Glutamate synthase central domain At1D1108_35670 PF01493 GXGXG motif At1D1108_35670 PF01645 Conserved region in glutamate synthase At1D1108_35680 PF01212 Beta-eliminating lyase At1D1108_35690 PF00072 Response regulator receiver domain At1D1108_35690 PF00486 Transcriptional regulatory protein, C terminal At1D1108_35700 PF02702 Osmosensitive K+ channel His kinase sensor domain At1D1108_35700 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_35700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_35700 PF13492 GAF domain At1D1108_35700 PF13493 Domain of unknown function (DUF4118) At1D1108_35710 PF02669 K+-transporting ATPase, c chain At1D1108_35740 PF03814 Potassium-transporting ATPase A subunit At1D1108_35760 PF00710 Asparaginase, N-terminal At1D1108_35760 PF17763 Glutaminase/Asparaginase C-terminal domain At1D1108_35770 PF00324 Amino acid permease At1D1108_35780 PF10415 Fumarase C C-terminus At1D1108_35780 PF00206 Lyase At1D1108_35790 PF00392 Bacterial regulatory proteins, gntR family At1D1108_35790 PF07729 FCD domain At1D1108_35800 PF00873 AcrB/AcrD/AcrF family At1D1108_35820 PF13533 Biotin-lipoyl like At1D1108_35830 PF00440 Bacterial regulatory proteins, tetR family At1D1108_35830 PF13977 BetI-type transcriptional repressor, C-terminal At1D1108_35840 PF00487 Fatty acid desaturase At1D1108_35880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_35880 PF03466 LysR substrate binding domain At1D1108_35910 PF08402 TOBE domain At1D1108_35910 PF00005 ABC transporter At1D1108_35920 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_35930 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_35960 PF00171 Aldehyde dehydrogenase family At1D1108_35970 PF00296 Luciferase-like monooxygenase At1D1108_35980 PF01613 Flavin reductase like domain At1D1108_35990 PF12697 Alpha/beta hydrolase family At1D1108_36010 PF00465 Iron-containing alcohol dehydrogenase At1D1108_36020 PF00005 ABC transporter At1D1108_36050 PF07729 FCD domain At1D1108_36050 PF00392 Bacterial regulatory proteins, gntR family At1D1108_36060 PF00551 Formyl transferase At1D1108_36070 PF00120 Glutamine synthetase, catalytic domain At1D1108_36080 PF01645 Conserved region in glutamate synthase At1D1108_36090 PF01493 GXGXG motif At1D1108_36130 PF00701 Dihydrodipicolinate synthetase family At1D1108_36140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_36140 PF00005 ABC transporter At1D1108_36160 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_36170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_36190 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At1D1108_36200 PF00465 Iron-containing alcohol dehydrogenase At1D1108_36210 PF00392 Bacterial regulatory proteins, gntR family At1D1108_36210 PF07729 FCD domain At1D1108_36250 PF03061 Thioesterase superfamily At1D1108_36300 PF04168 A predicted alpha-helical domain with a conserved ER motif. At1D1108_36300 PF14403 Circularly permuted ATP-grasp type 2 At1D1108_36310 PF08379 Bacterial transglutaminase-like N-terminal region At1D1108_36310 PF01841 Transglutaminase-like superfamily At1D1108_36330 PF12848 ABC transporter At1D1108_36330 PF00005 ABC transporter At1D1108_36340 PF01070 FMN-dependent dehydrogenase At1D1108_36350 PF01047 MarR family At1D1108_36360 PF00672 HAMP domain At1D1108_36360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_36370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_36370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_36380 PF01791 DeoC/LacD family aldolase At1D1108_36390 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1108_36390 PF01266 FAD dependent oxidoreductase At1D1108_36400 PF00248 Aldo/keto reductase family At1D1108_36420 PF02653 Branched-chain amino acid transport system / permease component At1D1108_36430 PF00005 ABC transporter At1D1108_36450 PF00072 Response regulator receiver domain At1D1108_36470 PF00459 Inositol monophosphatase family At1D1108_36490 PF00011 Hsp20/alpha crystallin family At1D1108_36500 PF13593 SBF-like CPA transporter family (DUF4137) At1D1108_36510 PF03466 LysR substrate binding domain At1D1108_36510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_36520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_36520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_36550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_36560 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_36570 PF17912 MalK OB fold domain At1D1108_36570 PF00005 ABC transporter At1D1108_36580 PF00005 ABC transporter At1D1108_36580 PF08402 TOBE domain At1D1108_36590 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1108_36590 PF01266 FAD dependent oxidoreductase At1D1108_36600 PF00455 DeoR C terminal sensor domain At1D1108_36600 PF08220 DeoR-like helix-turn-helix domain At1D1108_36610 PF14824 Sirohaem biosynthesis protein central At1D1108_36610 PF10414 Sirohaem synthase dimerisation region At1D1108_36610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1108_36620 PF00384 Molybdopterin oxidoreductase At1D1108_36620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1108_36620 PF04324 BFD-like [2Fe-2S] binding domain At1D1108_36620 PF01568 Molydopterin dinucleotide binding domain At1D1108_36650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At1D1108_36650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain At1D1108_36650 PF04324 BFD-like [2Fe-2S] binding domain At1D1108_36650 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_36650 PF18267 Rubredoxin NAD+ reductase C-terminal domain At1D1108_36660 PF00005 ABC transporter At1D1108_36670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_36700 PF08376 Nitrate and nitrite sensing At1D1108_36700 PF03861 ANTAR domain At1D1108_36710 PF07729 FCD domain At1D1108_36710 PF00392 Bacterial regulatory proteins, gntR family At1D1108_36720 PF01566 Natural resistance-associated macrophage protein At1D1108_36730 PF03746 LamB/YcsF family At1D1108_36740 PF07286 Protein of unknown function (DUF1445) At1D1108_36750 PF02682 Carboxyltransferase domain, subdomain C and D At1D1108_36760 PF02785 Biotin carboxylase C-terminal domain At1D1108_36760 PF00364 Biotin-requiring enzyme At1D1108_36760 PF00289 Biotin carboxylase, N-terminal domain At1D1108_36760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_36770 PF02806 Alpha amylase, C-terminal all-beta domain At1D1108_36770 PF00128 Alpha amylase, catalytic domain At1D1108_36780 PF00376 MerR family regulatory protein At1D1108_36780 PF09278 MerR, DNA binding At1D1108_36790 PF07715 TonB-dependent Receptor Plug Domain At1D1108_36790 PF00593 TonB dependent receptor At1D1108_36800 PF02885 Glycosyl transferase family, helical bundle domain At1D1108_36800 PF00591 Glycosyl transferase family, a/b domain At1D1108_36810 PF06772 Bacterial low temperature requirement A protein (LtrA) At1D1108_36840 PF03428 Replication protein C N-terminal domain At1D1108_36840 PF11800 Replication protein C C-terminal region At1D1108_36850 PF07506 RepB plasmid partitioning protein At1D1108_36850 PF02195 ParB-like nuclease domain At1D1108_36860 PF13614 AAA domain At1D1108_36880 PF01042 Endoribonuclease L-PSP At1D1108_36890 PF14031 Putative serine dehydratase domain At1D1108_36890 PF01168 Alanine racemase, N-terminal domain At1D1108_36900 PF07364 Metallopeptidase family M81 At1D1108_36900 PF07171 MlrC C-terminus At1D1108_36910 PF05962 HutD At1D1108_36920 PF12697 Alpha/beta hydrolase family At1D1108_36930 PF17392 Urocanase C-terminal domain At1D1108_36930 PF01175 Urocanase Rossmann-like domain At1D1108_36930 PF17391 Urocanase N-terminal domain At1D1108_36950 PF00221 Aromatic amino acid lyase At1D1108_36960 PF01979 Amidohydrolase family At1D1108_36970 PF01979 Amidohydrolase family At1D1108_36980 PF07702 UTRA domain At1D1108_36980 PF00392 Bacterial regulatory proteins, gntR family At1D1108_36990 PF00364 Biotin-requiring enzyme At1D1108_37000 PF00289 Biotin carboxylase, N-terminal domain At1D1108_37000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1108_37000 PF02785 Biotin carboxylase C-terminal domain At1D1108_37030 PF02626 Carboxyltransferase domain, subdomain A and B At1D1108_37040 PF03746 LamB/YcsF family At1D1108_37060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_37060 PF03466 LysR substrate binding domain At1D1108_37070 PF00106 short chain dehydrogenase At1D1108_37080 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37090 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37100 PF00005 ABC transporter At1D1108_37110 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_37120 PF03737 Aldolase/RraA At1D1108_37140 PF00005 ABC transporter At1D1108_37150 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37160 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37170 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_37180 PF03466 LysR substrate binding domain At1D1108_37180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_37210 PF03358 NADPH-dependent FMN reductase At1D1108_37220 PF03960 ArsC family At1D1108_37230 PF01758 Sodium Bile acid symporter family At1D1108_37250 PF03737 Aldolase/RraA At1D1108_37260 PF01370 NAD dependent epimerase/dehydratase family At1D1108_37270 PF00920 Dehydratase family At1D1108_37280 PF00005 ABC transporter At1D1108_37280 PF17912 MalK OB fold domain At1D1108_37280 PF03459 TOBE domain At1D1108_37290 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37300 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_37320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_37330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_37330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_37340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_37340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_37350 PF00392 Bacterial regulatory proteins, gntR family At1D1108_37350 PF07729 FCD domain At1D1108_37370 PF00293 NUDIX domain At1D1108_37380 PF02567 Phenazine biosynthesis-like protein At1D1108_37400 PF01494 FAD binding domain At1D1108_37410 PF03466 LysR substrate binding domain At1D1108_37410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_37420 PF07690 Major Facilitator Superfamily At1D1108_37430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_37440 PF00296 Luciferase-like monooxygenase At1D1108_37460 PF00005 ABC transporter At1D1108_37460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_37470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_37490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_37500 PF01568 Molydopterin dinucleotide binding domain At1D1108_37500 PF00384 Molybdopterin oxidoreductase At1D1108_37510 PF02913 FAD linked oxidases, C-terminal domain At1D1108_37510 PF01565 FAD binding domain At1D1108_37520 PF01323 DSBA-like thioredoxin domain At1D1108_37550 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_37550 PF00672 HAMP domain At1D1108_37550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_37560 PF00072 Response regulator receiver domain At1D1108_37560 PF00486 Transcriptional regulatory protein, C terminal At1D1108_37570 PF01569 PAP2 superfamily At1D1108_37660 PF13673 Acetyltransferase (GNAT) domain At1D1108_37670 PF06968 Biotin and Thiamin Synthesis associated domain At1D1108_37670 PF04055 Radical SAM superfamily At1D1108_37680 PF00155 Aminotransferase class I and II At1D1108_37700 PF00202 Aminotransferase class-III At1D1108_37710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At1D1108_37710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At1D1108_37730 PF00491 Arginase family At1D1108_37740 PF02423 Ornithine cyclodeaminase/mu-crystallin family At1D1108_37750 PF00892 EamA-like transporter family At1D1108_37760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_37760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_37780 PF00211 Adenylate and Guanylate cyclase catalytic domain At1D1108_37800 PF11972 HTH DNA binding domain At1D1108_37800 PF07756 Protein of unknown function (DUF1612) At1D1108_37810 PF00083 Sugar (and other) transporter At1D1108_37820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_37820 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_37830 PF00072 Response regulator receiver domain At1D1108_37830 PF00486 Transcriptional regulatory protein, C terminal At1D1108_37840 PF08019 Phosphoethanolamine transferase EptA/EptB At1D1108_37840 PF00884 Sulfatase At1D1108_37860 PF03466 LysR substrate binding domain At1D1108_37860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_37870 PF00593 TonB dependent receptor At1D1108_37870 PF07715 TonB-dependent Receptor Plug Domain At1D1108_37890 PF01032 FecCD transport family At1D1108_37900 PF00005 ABC transporter At1D1108_37930 PF02631 RecX family At1D1108_37940 PF08450 SMP-30/Gluconolactonase/LRE-like region At1D1108_37960 PF02653 Branched-chain amino acid transport system / permease component At1D1108_37970 PF00005 ABC transporter At1D1108_37980 PF13407 Periplasmic binding protein domain At1D1108_38080 PF00239 Resolvase, N terminal domain At1D1108_38080 PF07508 Recombinase At1D1108_38080 PF13408 Recombinase zinc beta ribbon domain At1D1108_38090 PF07730 Histidine kinase At1D1108_38090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_38100 PF00196 Bacterial regulatory proteins, luxR family At1D1108_38100 PF00072 Response regulator receiver domain At1D1108_38120 PF07995 Glucose / Sorbosone dehydrogenase At1D1108_38140 PF04445 Putative SAM-dependent methyltransferase At1D1108_38150 PF00849 RNA pseudouridylate synthase At1D1108_38160 PF01205 Uncharacterized protein family UPF0029 At1D1108_38170 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_38170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_38180 PF00005 ABC transporter At1D1108_38180 PF00571 CBS domain At1D1108_38190 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_38210 PF00072 Response regulator receiver domain At1D1108_38210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_38210 PF13426 PAS domain At1D1108_38220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_38230 PF02706 Chain length determinant protein At1D1108_38230 PF13807 G-rich domain on putative tyrosine kinase At1D1108_38230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1108_38240 PF00483 Nucleotidyl transferase At1D1108_38250 PF00535 Glycosyl transferase family 2 At1D1108_38260 PF00535 Glycosyl transferase family 2 At1D1108_38270 PF00535 Glycosyl transferase family 2 At1D1108_38290 PF00722 Glycosyl hydrolases family 16 At1D1108_38300 PF01757 Acyltransferase family At1D1108_38310 PF01943 Polysaccharide biosynthesis protein At1D1108_38320 PF00535 Glycosyl transferase family 2 At1D1108_38330 PF04230 Polysaccharide pyruvyl transferase At1D1108_38340 PF00535 Glycosyl transferase family 2 At1D1108_38350 PF11089 Exopolysaccharide production repressor At1D1108_38380 PF01165 Ribosomal protein S21 At1D1108_38390 PF01266 FAD dependent oxidoreductase At1D1108_38420 PF17806 Sarcosine oxidase A3 domain At1D1108_38420 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1108_38420 PF01571 Aminomethyltransferase folate-binding domain At1D1108_38420 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_38460 PF01575 MaoC like domain At1D1108_38470 PF18390 Glycogen debranching enzyme C-terminal domain At1D1108_38470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1108_38470 PF00128 Alpha amylase, catalytic domain At1D1108_38480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At1D1108_38480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At1D1108_38480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At1D1108_38480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At1D1108_38490 PF00534 Glycosyl transferases group 1 At1D1108_38490 PF08323 Starch synthase catalytic domain At1D1108_38500 PF00483 Nucleotidyl transferase At1D1108_38510 PF00128 Alpha amylase, catalytic domain At1D1108_38510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1108_38510 PF02806 Alpha amylase, C-terminal all-beta domain At1D1108_38520 PF00343 Carbohydrate phosphorylase At1D1108_38540 PF01177 Asp/Glu/Hydantoin racemase At1D1108_38550 PF01037 Lrp/AsnC ligand binding domain At1D1108_38570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_38570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1108_38590 PF00107 Zinc-binding dehydrogenase At1D1108_38590 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_38610 PF00664 ABC transporter transmembrane region At1D1108_38610 PF00005 ABC transporter At1D1108_38620 PF00005 ABC transporter At1D1108_38620 PF00664 ABC transporter transmembrane region At1D1108_38630 PF01654 Cytochrome bd terminal oxidase subunit I At1D1108_38640 PF02322 Cytochrome bd terminal oxidase subunit II At1D1108_38650 PF08173 Membrane bound YbgT-like protein At1D1108_38690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain At1D1108_38690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain At1D1108_38700 PF00890 FAD binding domain At1D1108_38700 PF02910 Fumarate reductase flavoprotein C-term At1D1108_38710 PF02445 Quinolinate synthetase A protein At1D1108_38760 PF02224 Cytidylate kinase At1D1108_38770 PF00575 S1 RNA binding domain At1D1108_38830 PF00106 short chain dehydrogenase At1D1108_38840 PF00557 Metallopeptidase family M24 At1D1108_38840 PF01321 Creatinase/Prolidase N-terminal domain At1D1108_38850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_38860 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_38870 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_38870 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_38880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_38880 PF00005 ABC transporter At1D1108_38890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_38890 PF00005 ABC transporter At1D1108_38900 PF07729 FCD domain At1D1108_38900 PF00392 Bacterial regulatory proteins, gntR family At1D1108_38910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_38910 PF13378 Enolase C-terminal domain-like At1D1108_38920 PF00296 Luciferase-like monooxygenase At1D1108_38950 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_38950 PF00005 ABC transporter At1D1108_38960 PF00005 ABC transporter At1D1108_38970 PF02653 Branched-chain amino acid transport system / permease component At1D1108_38980 PF11862 Domain of unknown function (DUF3382) At1D1108_38980 PF02653 Branched-chain amino acid transport system / permease component At1D1108_38990 PF00732 GMC oxidoreductase At1D1108_38990 PF05199 GMC oxidoreductase At1D1108_39000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_39000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1108_39010 PF00501 AMP-binding enzyme At1D1108_39010 PF13193 AMP-binding enzyme C-terminal domain At1D1108_39060 PF01011 PQQ enzyme repeat At1D1108_39070 PF05974 Domain of unknown function (DUF892) At1D1108_39090 PF01965 DJ-1/PfpI family At1D1108_39140 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At1D1108_39140 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At1D1108_39150 PF16363 GDP-mannose 4,6 dehydratase At1D1108_39160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At1D1108_39160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At1D1108_39160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At1D1108_39180 PF13409 Glutathione S-transferase, N-terminal domain At1D1108_39190 PF03466 LysR substrate binding domain At1D1108_39190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_39200 PF00171 Aldehyde dehydrogenase family At1D1108_39210 PF09084 NMT1/THI5 like At1D1108_39220 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_39230 PF00005 ABC transporter At1D1108_39240 PF01619 Proline dehydrogenase At1D1108_39240 PF14850 DNA-binding domain of Proline dehydrogenase At1D1108_39240 PF18327 Proline utilization A proline dehydrogenase N-terminal domain At1D1108_39240 PF00171 Aldehyde dehydrogenase family At1D1108_39250 PF01037 Lrp/AsnC ligand binding domain At1D1108_39260 PF08281 Sigma-70, region 4 At1D1108_39260 PF04542 Sigma-70 region 2 At1D1108_39280 PF00072 Response regulator receiver domain At1D1108_39290 PF08447 PAS fold At1D1108_39290 PF07536 HWE histidine kinase At1D1108_39290 PF13426 PAS domain At1D1108_39300 PF13426 PAS domain At1D1108_39300 PF07536 HWE histidine kinase At1D1108_39320 PF16363 GDP-mannose 4,6 dehydratase At1D1108_39350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1108_39360 PF03435 Saccharopine dehydrogenase NADP binding domain At1D1108_39360 PF16653 Saccharopine dehydrogenase C-terminal domain At1D1108_39370 PF00270 DEAD/DEAH box helicase At1D1108_39370 PF00271 Helicase conserved C-terminal domain At1D1108_39380 PF00696 Amino acid kinase family At1D1108_39380 PF13840 ACT domain At1D1108_39380 PF01842 ACT domain At1D1108_39390 PF02896 PEP-utilising enzyme, TIM barrel domain At1D1108_39390 PF00391 PEP-utilising enzyme, mobile domain At1D1108_39390 PF05524 PEP-utilising enzyme, N-terminal At1D1108_39390 PF01590 GAF domain At1D1108_39400 PF03462 PCRF domain At1D1108_39400 PF00472 RF-1 domain At1D1108_39410 PF05175 Methyltransferase small domain At1D1108_39410 PF17827 PrmC N-terminal domain At1D1108_39430 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1108_39430 PF17871 AAA lid domain At1D1108_39430 PF07724 AAA domain (Cdc48 subfamily) At1D1108_39430 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_39430 PF02861 Clp amino terminal domain, pathogenicity island component At1D1108_39440 PF01551 Peptidase family M23 At1D1108_39440 PF10145 Phage-related minor tail protein At1D1108_39440 PF01464 Transglycosylase SLT domain At1D1108_39450 PF00091 Tubulin/FtsZ family, GTPase domain At1D1108_39450 PF12327 FtsZ family, C-terminal domain At1D1108_39460 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1108_39460 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1108_39490 PF00873 AcrB/AcrD/AcrF family At1D1108_39500 PF00440 Bacterial regulatory proteins, tetR family At1D1108_39510 PF00106 short chain dehydrogenase At1D1108_39520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_39530 PF00106 short chain dehydrogenase At1D1108_39540 PF00107 Zinc-binding dehydrogenase At1D1108_39540 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_39560 PF00384 Molybdopterin oxidoreductase At1D1108_39570 PF07690 Major Facilitator Superfamily At1D1108_39580 PF01494 FAD binding domain At1D1108_39590 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_39610 PF00072 Response regulator receiver domain At1D1108_39610 PF00196 Bacterial regulatory proteins, luxR family At1D1108_39620 PF00072 Response regulator receiver domain At1D1108_39620 PF00196 Bacterial regulatory proteins, luxR family At1D1108_39630 PF00072 Response regulator receiver domain At1D1108_39630 PF13426 PAS domain At1D1108_39630 PF08448 PAS fold At1D1108_39630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_39630 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_39640 PF00190 Cupin At1D1108_39650 PF00210 Ferritin-like domain At1D1108_39660 PF00561 alpha/beta hydrolase fold At1D1108_39670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_39670 PF03466 LysR substrate binding domain At1D1108_39700 PF01047 MarR family At1D1108_39720 PF00561 alpha/beta hydrolase fold At1D1108_39730 PF04752 ChaC-like protein At1D1108_39740 PF03466 LysR substrate binding domain At1D1108_39740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_39750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_39760 PF03466 LysR substrate binding domain At1D1108_39760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_39790 PF07969 Amidohydrolase family At1D1108_39830 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1108_39830 PF10518 TAT (twin-arginine translocation) pathway signal sequence At1D1108_39830 PF01799 [2Fe-2S] binding domain At1D1108_39840 PF00941 FAD binding domain in molybdopterin dehydrogenase At1D1108_39840 PF03450 CO dehydrogenase flavoprotein C-terminal domain At1D1108_39850 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At1D1108_39850 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At1D1108_39860 PF13478 XdhC Rossmann domain At1D1108_39860 PF02625 XdhC and CoxI family At1D1108_39870 PF12804 MobA-like NTP transferase domain At1D1108_39870 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1108_39890 PF01965 DJ-1/PfpI family At1D1108_39900 PF03707 Bacterial signalling protein N terminal repeat At1D1108_39900 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_39900 PF00563 EAL domain At1D1108_39910 PF00313 'Cold-shock' DNA-binding domain At1D1108_39920 PF00005 ABC transporter At1D1108_39920 PF00571 CBS domain At1D1108_39930 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_39960 PF00392 Bacterial regulatory proteins, gntR family At1D1108_39960 PF07702 UTRA domain At1D1108_39970 PF00221 Aromatic amino acid lyase At1D1108_40010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_40010 PF00005 ABC transporter At1D1108_40020 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_40020 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_40030 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_40040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_40060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_40060 PF02203 Tar ligand binding domain homologue At1D1108_40060 PF00672 HAMP domain At1D1108_40080 PF00563 EAL domain At1D1108_40080 PF03707 Bacterial signalling protein N terminal repeat At1D1108_40080 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_40080 PF13188 PAS domain At1D1108_40130 PF00356 Bacterial regulatory proteins, lacI family At1D1108_40150 PF00005 ABC transporter At1D1108_40160 PF02653 Branched-chain amino acid transport system / permease component At1D1108_40170 PF02126 Phosphotriesterase family At1D1108_40190 PF00294 pfkB family carbohydrate kinase At1D1108_40200 PF01546 Peptidase family M20/M25/M40 At1D1108_40200 PF07687 Peptidase dimerisation domain At1D1108_40210 PF02469 Fasciclin domain At1D1108_40220 PF11791 Aconitate B N-terminal domain At1D1108_40220 PF00330 Aconitase family (aconitate hydratase) At1D1108_40220 PF06434 Aconitate hydratase 2 N-terminus At1D1108_40240 PF00733 Asparagine synthase At1D1108_40240 PF13537 Glutamine amidotransferase domain At1D1108_40260 PF00501 AMP-binding enzyme At1D1108_40260 PF13193 AMP-binding enzyme C-terminal domain At1D1108_40270 PF02540 NAD synthase At1D1108_40310 PF17806 Sarcosine oxidase A3 domain At1D1108_40310 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1108_40310 PF01571 Aminomethyltransferase folate-binding domain At1D1108_40310 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_40320 PF04267 Sarcosine oxidase, delta subunit family At1D1108_40330 PF01266 FAD dependent oxidoreductase At1D1108_40340 PF12833 Helix-turn-helix domain At1D1108_40340 PF01965 DJ-1/PfpI family At1D1108_40350 PF00005 ABC transporter At1D1108_40360 PF02653 Branched-chain amino acid transport system / permease component At1D1108_40370 PF02653 Branched-chain amino acid transport system / permease component At1D1108_40390 PF00392 Bacterial regulatory proteins, gntR family At1D1108_40390 PF07729 FCD domain At1D1108_40410 PF08125 Mannitol dehydrogenase C-terminal domain At1D1108_40410 PF01232 Mannitol dehydrogenase Rossmann domain At1D1108_40420 PF03786 D-mannonate dehydratase (UxuA) At1D1108_40430 PF00248 Aldo/keto reductase family At1D1108_40460 PF00440 Bacterial regulatory proteins, tetR family At1D1108_40470 PF00107 Zinc-binding dehydrogenase At1D1108_40470 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_40480 PF12833 Helix-turn-helix domain At1D1108_40490 PF13407 Periplasmic binding protein domain At1D1108_40500 PF00005 ABC transporter At1D1108_40510 PF02653 Branched-chain amino acid transport system / permease component At1D1108_40520 PF00106 short chain dehydrogenase At1D1108_40530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_40530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_40550 PF00083 Sugar (and other) transporter At1D1108_40550 PF08946 Osmosensory transporter coiled coil At1D1108_40570 PF00459 Inositol monophosphatase family At1D1108_40600 PF02690 Na+/Pi-cotransporter At1D1108_40610 PF00356 Bacterial regulatory proteins, lacI family At1D1108_40620 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_40670 PF00459 Inositol monophosphatase family At1D1108_40690 PF03471 Transporter associated domain At1D1108_40690 PF03741 Integral membrane protein TerC family At1D1108_40720 PF03459 TOBE domain At1D1108_40720 PF17912 MalK OB fold domain At1D1108_40720 PF00005 ABC transporter At1D1108_40730 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_40740 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_40750 PF13416 Bacterial extracellular solute-binding protein At1D1108_40760 PF01261 Xylose isomerase-like TIM barrel At1D1108_40770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_40770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_40780 PF00356 Bacterial regulatory proteins, lacI family At1D1108_40810 PF01266 FAD dependent oxidoreductase At1D1108_40830 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1108_40830 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_40830 PF17806 Sarcosine oxidase A3 domain At1D1108_40830 PF01571 Aminomethyltransferase folate-binding domain At1D1108_40850 PF00464 Serine hydroxymethyltransferase At1D1108_40860 PF00551 Formyl transferase At1D1108_40870 PF00924 Mechanosensitive ion channel At1D1108_40890 PF01740 STAS domain At1D1108_40890 PF00916 Sulfate permease family At1D1108_40920 PF01648 4'-phosphopantetheinyl transferase superfamily At1D1108_40920 PF17837 4'-phosphopantetheinyl transferase N-terminal domain At1D1108_40940 PF00857 Isochorismatase family At1D1108_40940 PF00550 Phosphopantetheine attachment site At1D1108_40950 PF00501 AMP-binding enzyme At1D1108_40950 PF13193 AMP-binding enzyme C-terminal domain At1D1108_40960 PF00425 chorismate binding enzyme At1D1108_40970 PF00501 AMP-binding enzyme At1D1108_40970 PF00668 Condensation domain At1D1108_40970 PF13193 AMP-binding enzyme C-terminal domain At1D1108_40970 PF00550 Phosphopantetheine attachment site At1D1108_40980 PF00550 Phosphopantetheine attachment site At1D1108_40980 PF00975 Thioesterase domain At1D1108_40980 PF00668 Condensation domain At1D1108_40980 PF00501 AMP-binding enzyme At1D1108_40990 PF13193 AMP-binding enzyme C-terminal domain At1D1108_40990 PF00668 Condensation domain At1D1108_40990 PF00975 Thioesterase domain At1D1108_40990 PF00501 AMP-binding enzyme At1D1108_40990 PF00550 Phosphopantetheine attachment site At1D1108_41010 PF08021 Siderophore-interacting FAD-binding domain At1D1108_41010 PF04954 Siderophore-interacting protein At1D1108_41030 PF01032 FecCD transport family At1D1108_41040 PF01032 FecCD transport family At1D1108_41050 PF00005 ABC transporter At1D1108_41080 PF07715 TonB-dependent Receptor Plug Domain At1D1108_41090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_41090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_41090 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1108_41100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_41100 PF03466 LysR substrate binding domain At1D1108_41110 PF00356 Bacterial regulatory proteins, lacI family At1D1108_41130 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41150 PF00005 ABC transporter At1D1108_41150 PF08402 TOBE domain At1D1108_41170 PF13382 Adenine deaminase C-terminal domain At1D1108_41170 PF01979 Amidohydrolase family At1D1108_41180 PF07690 Major Facilitator Superfamily At1D1108_41190 PF01546 Peptidase family M20/M25/M40 At1D1108_41190 PF07687 Peptidase dimerisation domain At1D1108_41210 PF01244 Membrane dipeptidase (Peptidase family M19) At1D1108_41220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_41230 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41250 PF00005 ABC transporter At1D1108_41250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_41260 PF00005 ABC transporter At1D1108_41260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_41270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_41270 PF03466 LysR substrate binding domain At1D1108_41280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_41290 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41300 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_41300 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41310 PF01425 Amidase At1D1108_41320 PF01965 DJ-1/PfpI family At1D1108_41340 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41340 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_41350 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_41370 PF07687 Peptidase dimerisation domain At1D1108_41370 PF01546 Peptidase family M20/M25/M40 At1D1108_41380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_41380 PF00005 ABC transporter At1D1108_41390 PF04198 Putative sugar-binding domain At1D1108_41410 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41430 PF08402 TOBE domain At1D1108_41430 PF00005 ABC transporter At1D1108_41440 PF08125 Mannitol dehydrogenase C-terminal domain At1D1108_41440 PF01232 Mannitol dehydrogenase Rossmann domain At1D1108_41450 PF13419 Haloacid dehalogenase-like hydrolase At1D1108_41460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_41460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_41470 PF01418 Helix-turn-helix domain, rpiR family At1D1108_41470 PF01380 SIS domain At1D1108_41490 PF00730 HhH-GPD superfamily base excision DNA repair protein At1D1108_41490 PF00633 Helix-hairpin-helix motif At1D1108_41490 PF10576 Iron-sulfur binding domain of endonuclease III At1D1108_41510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At1D1108_41510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At1D1108_41520 PF13936 Helix-turn-helix domain At1D1108_41520 PF04198 Putative sugar-binding domain At1D1108_41530 PF00923 Transaldolase/Fructose-6-phosphate aldolase At1D1108_41540 PF09339 IclR helix-turn-helix domain At1D1108_41540 PF01614 Bacterial transcriptional regulator At1D1108_41560 PF07043 Protein of unknown function (DUF1328) At1D1108_41570 PF00950 ABC 3 transport family At1D1108_41580 PF00950 ABC 3 transport family At1D1108_41590 PF00005 ABC transporter At1D1108_41600 PF01297 Zinc-uptake complex component A periplasmic At1D1108_41620 PF00152 tRNA synthetases class II (D, K and N) At1D1108_41620 PF01336 OB-fold nucleic acid binding domain At1D1108_41630 PF00749 tRNA synthetases class I (E and Q), catalytic domain At1D1108_41640 PF03600 Citrate transporter At1D1108_41640 PF02080 TrkA-C domain At1D1108_41650 PF03471 Transporter associated domain At1D1108_41650 PF03741 Integral membrane protein TerC family At1D1108_41660 PF00440 Bacterial regulatory proteins, tetR family At1D1108_41670 PF13533 Biotin-lipoyl like At1D1108_41680 PF07690 Major Facilitator Superfamily At1D1108_41690 PF00356 Bacterial regulatory proteins, lacI family At1D1108_41690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At1D1108_41700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_41700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_41710 PF01261 Xylose isomerase-like TIM barrel At1D1108_41730 PF00232 Glycosyl hydrolase family 1 At1D1108_41740 PF00881 Nitroreductase family At1D1108_41750 PF09383 NIL domain At1D1108_41750 PF00005 ABC transporter At1D1108_41760 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_41770 PF03180 NLPA lipoprotein At1D1108_41780 PF00563 EAL domain At1D1108_41780 PF13188 PAS domain At1D1108_41780 PF03707 Bacterial signalling protein N terminal repeat At1D1108_41780 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_41820 PF01081 KDPG and KHG aldolase At1D1108_41860 PF03824 High-affinity nickel-transport protein At1D1108_41900 PF13505 Outer membrane protein beta-barrel domain At1D1108_41930 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1108_41930 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1108_41940 PF02633 Creatinine amidohydrolase At1D1108_41950 PF01047 MarR family At1D1108_41960 PF00356 Bacterial regulatory proteins, lacI family At1D1108_41970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_41970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_41980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_41980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_41990 PF04962 KduI/IolB family At1D1108_42000 PF01261 Xylose isomerase-like TIM barrel At1D1108_42010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1108_42010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1108_42010 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1108_42020 PF00294 pfkB family carbohydrate kinase At1D1108_42040 PF08402 TOBE domain At1D1108_42040 PF00005 ABC transporter At1D1108_42050 PF00005 ABC transporter At1D1108_42050 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_42080 PF13458 Periplasmic binding protein At1D1108_42110 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42110 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_42120 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_42140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_42140 PF00005 ABC transporter At1D1108_42170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1108_42190 PF01220 Dehydroquinase class II At1D1108_42200 PF08501 Shikimate dehydrogenase substrate binding domain At1D1108_42200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At1D1108_42210 PF00005 ABC transporter At1D1108_42220 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_42230 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_42240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42260 PF00206 Lyase At1D1108_42260 PF10397 Adenylosuccinate lyase C-terminus At1D1108_42270 PF00775 Dioxygenase At1D1108_42280 PF00775 Dioxygenase At1D1108_42280 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal At1D1108_42290 PF02627 Carboxymuconolactone decarboxylase family At1D1108_42310 PF03466 LysR substrate binding domain At1D1108_42310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_42320 PF01494 FAD binding domain At1D1108_42340 PF09339 IclR helix-turn-helix domain At1D1108_42340 PF01614 Bacterial transcriptional regulator At1D1108_42350 PF01144 Coenzyme A transferase At1D1108_42360 PF01144 Coenzyme A transferase At1D1108_42370 PF02803 Thiolase, C-terminal domain At1D1108_42370 PF00108 Thiolase, N-terminal domain At1D1108_42380 PF00356 Bacterial regulatory proteins, lacI family At1D1108_42390 PF13407 Periplasmic binding protein domain At1D1108_42400 PF01261 Xylose isomerase-like TIM barrel At1D1108_42410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_42410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_42430 PF00356 Bacterial regulatory proteins, lacI family At1D1108_42440 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42450 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42460 PF17912 MalK OB fold domain At1D1108_42460 PF00005 ABC transporter At1D1108_42480 PF07470 Glycosyl Hydrolase Family 88 At1D1108_42520 PF00480 ROK family At1D1108_42540 PF17912 MalK OB fold domain At1D1108_42540 PF00005 ABC transporter At1D1108_42550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42560 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42570 PF03009 Glycerophosphoryl diester phosphodiesterase family At1D1108_42580 PF00459 Inositol monophosphatase family At1D1108_42590 PF00480 ROK family At1D1108_42600 PF01547 Bacterial extracellular solute-binding protein At1D1108_42610 PF00005 ABC transporter At1D1108_42610 PF08402 TOBE domain At1D1108_42620 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_42640 PF01613 Flavin reductase like domain At1D1108_42660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At1D1108_42660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At1D1108_42710 PF08479 POTRA domain, ShlB-type At1D1108_42710 PF17287 POTRA domain At1D1108_42710 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB At1D1108_42730 PF13332 Hemagglutinin repeat At1D1108_42730 PF05594 Haemagluttinin repeat At1D1108_42730 PF05860 haemagglutination activity domain At1D1108_42730 PF15526 Novel toxin 21 At1D1108_42730 PF05860 haemagglutination activity domain At1D1108_42730 PF13332 Hemagglutinin repeat At1D1108_42730 PF04829 Pre-toxin domain with VENN motif At1D1108_42730 PF04829 Pre-toxin domain with VENN motif At1D1108_42730 PF15526 Novel toxin 21 At1D1108_42730 PF05594 Haemagluttinin repeat At1D1108_42750 PF05860 haemagglutination activity domain At1D1108_42750 PF13332 Hemagglutinin repeat At1D1108_42750 PF04829 Pre-toxin domain with VENN motif At1D1108_42780 PF00012 Hsp70 protein At1D1108_42810 PF01758 Sodium Bile acid symporter family At1D1108_42840 PF00005 ABC transporter At1D1108_42840 PF00664 ABC transporter transmembrane region At1D1108_42850 PF01050 Mannose-6-phosphate isomerase At1D1108_42850 PF00483 Nucleotidyl transferase At1D1108_42860 PF13439 Glycosyltransferase Family 4 At1D1108_42860 PF00534 Glycosyl transferases group 1 At1D1108_42870 PF16363 GDP-mannose 4,6 dehydratase At1D1108_42880 PF16363 GDP-mannose 4,6 dehydratase At1D1108_42910 PF13439 Glycosyltransferase Family 4 At1D1108_42910 PF00534 Glycosyl transferases group 1 At1D1108_42950 PF13276 HTH-like domain At1D1108_42950 PF13683 Integrase core domain At1D1108_42960 PF01527 Transposase At1D1108_42970 PF05717 IS66 Orf2 like protein At1D1108_42980 PF13007 Transposase C of IS166 homeodomain At1D1108_42980 PF03050 Transposase IS66 family At1D1108_42980 PF13005 zinc-finger binding domain of transposase IS66 At1D1108_42980 PF13817 IS66 C-terminal element At1D1108_42990 PF13673 Acetyltransferase (GNAT) domain At1D1108_42990 PF04229 GrpB protein At1D1108_43000 PF03050 Transposase IS66 family At1D1108_43000 PF13007 Transposase C of IS166 homeodomain At1D1108_43000 PF13005 zinc-finger binding domain of transposase IS66 At1D1108_43000 PF13817 IS66 C-terminal element At1D1108_43010 PF05717 IS66 Orf2 like protein At1D1108_43030 PF13683 Integrase core domain At1D1108_43030 PF13276 HTH-like domain At1D1108_43040 PF01527 Transposase At1D1108_43070 PF00535 Glycosyl transferase family 2 At1D1108_43110 PF00485 Phosphoribulokinase / Uridine kinase family At1D1108_43150 PF01497 Periplasmic binding protein At1D1108_43160 PF01032 FecCD transport family At1D1108_43170 PF01032 FecCD transport family At1D1108_43180 PF00005 ABC transporter At1D1108_43190 PF07715 TonB-dependent Receptor Plug Domain At1D1108_43200 PF00817 impB/mucB/samB family At1D1108_43200 PF11799 impB/mucB/samB family C-terminal domain At1D1108_43210 PF13361 UvrD-like helicase C-terminal domain At1D1108_43210 PF00580 UvrD/REP helicase N-terminal domain At1D1108_43230 PF00356 Bacterial regulatory proteins, lacI family At1D1108_43240 PF01593 Flavin containing amine oxidoreductase At1D1108_43260 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43270 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43280 PF17912 MalK OB fold domain At1D1108_43280 PF00005 ABC transporter At1D1108_43280 PF03459 TOBE domain At1D1108_43290 PF00005 ABC transporter At1D1108_43290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_43300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_43300 PF00005 ABC transporter At1D1108_43310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43310 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_43320 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43330 PF07729 FCD domain At1D1108_43330 PF00392 Bacterial regulatory proteins, gntR family At1D1108_43340 PF03786 D-mannonate dehydratase (UxuA) At1D1108_43350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_43370 PF00563 EAL domain At1D1108_43370 PF03707 Bacterial signalling protein N terminal repeat At1D1108_43370 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_43370 PF13188 PAS domain At1D1108_43400 PF02735 Ku70/Ku80 beta-barrel domain At1D1108_43410 PF04679 ATP dependent DNA ligase C terminal region At1D1108_43410 PF13298 DNA polymerase Ligase (LigD) At1D1108_43410 PF01068 ATP dependent DNA ligase domain At1D1108_43420 PF02735 Ku70/Ku80 beta-barrel domain At1D1108_43430 PF01384 Phosphate transporter family At1D1108_43440 PF01865 Protein of unknown function DUF47 At1D1108_43460 PF00873 AcrB/AcrD/AcrF family At1D1108_43470 PF13533 Biotin-lipoyl like At1D1108_43480 PF00072 Response regulator receiver domain At1D1108_43480 PF00486 Transcriptional regulatory protein, C terminal At1D1108_43490 PF00672 HAMP domain At1D1108_43490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_43490 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_43510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_43510 PF03466 LysR substrate binding domain At1D1108_43520 PF00141 Peroxidase At1D1108_43540 PF02311 AraC-like ligand binding domain At1D1108_43540 PF12833 Helix-turn-helix domain At1D1108_43550 PF07715 TonB-dependent Receptor Plug Domain At1D1108_43550 PF00593 TonB dependent receptor At1D1108_43570 PF01032 FecCD transport family At1D1108_43580 PF01032 FecCD transport family At1D1108_43590 PF00005 ABC transporter At1D1108_43600 PF01638 HxlR-like helix-turn-helix At1D1108_43630 PF12833 Helix-turn-helix domain At1D1108_43630 PF10114 Sensory domain found in PocR At1D1108_43650 PF00171 Aldehyde dehydrogenase family At1D1108_43660 PF03466 LysR substrate binding domain At1D1108_43660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_43670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1108_43680 PF12411 Choline sulfatase enzyme C terminal At1D1108_43680 PF00884 Sulfatase At1D1108_43690 PF00294 pfkB family carbohydrate kinase At1D1108_43700 PF00005 ABC transporter At1D1108_43700 PF08402 TOBE domain At1D1108_43710 PF14698 Argininosuccinate lyase C-terminal At1D1108_43710 PF00206 Lyase At1D1108_43720 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43740 PF13416 Bacterial extracellular solute-binding protein At1D1108_43750 PF00480 ROK family At1D1108_43800 PF11975 Family 4 glycosyl hydrolase C-terminal domain At1D1108_43800 PF02056 Family 4 glycosyl hydrolase At1D1108_43810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_43820 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43830 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43830 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_43840 PF00005 ABC transporter At1D1108_43840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_43850 PF11975 Family 4 glycosyl hydrolase C-terminal domain At1D1108_43850 PF02056 Family 4 glycosyl hydrolase At1D1108_43880 PF00072 Response regulator receiver domain At1D1108_43890 PF12327 FtsZ family, C-terminal domain At1D1108_43890 PF00091 Tubulin/FtsZ family, GTPase domain At1D1108_43900 PF07729 FCD domain At1D1108_43900 PF00392 Bacterial regulatory proteins, gntR family At1D1108_43910 PF00701 Dihydrodipicolinate synthetase family At1D1108_43920 PF02615 Malate/L-lactate dehydrogenase At1D1108_43940 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43950 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_43960 PF00005 ABC transporter At1D1108_43970 PF01266 FAD dependent oxidoreductase At1D1108_43990 PF05544 Proline racemase At1D1108_44000 PF00356 Bacterial regulatory proteins, lacI family At1D1108_44030 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_44050 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_44060 PF00005 ABC transporter At1D1108_44070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_44070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_44080 PF00563 EAL domain At1D1108_44080 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_44080 PF03707 Bacterial signalling protein N terminal repeat At1D1108_44090 PF02530 Porin subfamily At1D1108_44100 PF01979 Amidohydrolase family At1D1108_44110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_44130 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_44130 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_44140 PF01979 Amidohydrolase family At1D1108_44150 PF01979 Amidohydrolase family At1D1108_44160 PF00005 ABC transporter At1D1108_44160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_44170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_44170 PF00005 ABC transporter At1D1108_44180 PF00392 Bacterial regulatory proteins, gntR family At1D1108_44180 PF07729 FCD domain At1D1108_44190 PF01613 Flavin reductase like domain At1D1108_44200 PF01177 Asp/Glu/Hydantoin racemase At1D1108_44210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_44210 PF03466 LysR substrate binding domain At1D1108_44230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At1D1108_44230 PF00037 4Fe-4S binding domain At1D1108_44230 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At1D1108_44240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At1D1108_44240 PF01568 Molydopterin dinucleotide binding domain At1D1108_44240 PF00384 Molybdopterin oxidoreductase At1D1108_44240 PF00037 4Fe-4S binding domain At1D1108_44240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1108_44260 PF07690 Major Facilitator Superfamily At1D1108_44270 PF13508 Acetyltransferase (GNAT) domain At1D1108_44270 PF00583 Acetyltransferase (GNAT) family At1D1108_44280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_44280 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_44280 PF08448 PAS fold At1D1108_44280 PF13426 PAS domain At1D1108_44280 PF00072 Response regulator receiver domain At1D1108_44290 PF00072 Response regulator receiver domain At1D1108_44290 PF00486 Transcriptional regulatory protein, C terminal At1D1108_44330 PF05532 CsbD-like At1D1108_44340 PF00072 Response regulator receiver domain At1D1108_44340 PF00196 Bacterial regulatory proteins, luxR family At1D1108_44350 PF03401 Tripartite tricarboxylate transporter family receptor At1D1108_44360 PF00005 ABC transporter At1D1108_44360 PF00664 ABC transporter transmembrane region At1D1108_44400 PF00563 EAL domain At1D1108_44400 PF12792 CSS motif domain associated with EAL At1D1108_44420 PF06628 Catalase-related immune-responsive At1D1108_44420 PF00199 Catalase At1D1108_44420 PF18011 C-terminal domain found in long catalases At1D1108_44530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_44530 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_44560 PF00360 Phytochrome region At1D1108_44560 PF00563 EAL domain At1D1108_44560 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_44560 PF01590 GAF domain At1D1108_44580 PF13302 Acetyltransferase (GNAT) domain At1D1108_44590 PF04244 Deoxyribodipyrimidine photo-lyase-related protein At1D1108_44680 PF04542 Sigma-70 region 2 At1D1108_44680 PF08281 Sigma-70, region 4 At1D1108_44710 PF00440 Bacterial regulatory proteins, tetR family At1D1108_44750 PF00005 ABC transporter At1D1108_44760 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_44770 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_44780 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_44790 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family At1D1108_44800 PF01321 Creatinase/Prolidase N-terminal domain At1D1108_44800 PF00557 Metallopeptidase family M24 At1D1108_44810 PF02423 Ornithine cyclodeaminase/mu-crystallin family At1D1108_44820 PF00291 Pyridoxal-phosphate dependent enzyme At1D1108_44830 PF00392 Bacterial regulatory proteins, gntR family At1D1108_44830 PF00155 Aminotransferase class I and II At1D1108_44840 PF00202 Aminotransferase class-III At1D1108_44850 PF00171 Aldehyde dehydrogenase family At1D1108_44860 PF01037 Lrp/AsnC ligand binding domain At1D1108_44880 PF02563 Polysaccharide biosynthesis/export protein At1D1108_44920 PF00691 OmpA family At1D1108_45030 PF07724 AAA domain (Cdc48 subfamily) At1D1108_45030 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1108_45030 PF17871 AAA lid domain At1D1108_45030 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_45070 PF04717 Type VI secretion system, phage-baseplate injector At1D1108_45250 PF17841 BID domain of Bartonella effector protein (Bep) At1D1108_45250 PF01443 Viral (Superfamily 1) RNA helicase At1D1108_45250 PF03389 MobA/MobL family At1D1108_45310 PF13505 Outer membrane protein beta-barrel domain At1D1108_45330 PF00300 Histidine phosphatase superfamily (branch 1) At1D1108_45360 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system At1D1108_45410 PF13614 AAA domain At1D1108_45410 PF00376 MerR family regulatory protein At1D1108_45420 PF02195 ParB-like nuclease domain At1D1108_45420 PF07506 RepB plasmid partitioning protein At1D1108_45430 PF03428 Replication protein C N-terminal domain At1D1108_45430 PF11800 Replication protein C C-terminal region At1D1108_45460 PF02515 CoA-transferase family III At1D1108_45470 PF00732 GMC oxidoreductase At1D1108_45470 PF05199 GMC oxidoreductase At1D1108_45480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_45480 PF03466 LysR substrate binding domain At1D1108_45490 PF03466 LysR substrate binding domain At1D1108_45490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_45530 PF00106 short chain dehydrogenase At1D1108_45540 PF12852 Cupin At1D1108_45540 PF12833 Helix-turn-helix domain At1D1108_45550 PF00106 short chain dehydrogenase At1D1108_45590 PF03328 HpcH/HpaI aldolase/citrate lyase family At1D1108_45600 PF01557 Fumarylacetoacetate (FAA) hydrolase family At1D1108_45610 PF00775 Dioxygenase At1D1108_45610 PF04444 Catechol dioxygenase N terminus At1D1108_45680 PF07756 Protein of unknown function (DUF1612) At1D1108_45680 PF11972 HTH DNA binding domain At1D1108_45750 PF08671 Anti-repressor SinI At1D1108_45750 PF01381 Helix-turn-helix At1D1108_45770 PF00004 ATPase family associated with various cellular activities (AAA) At1D1108_45770 PF05362 Lon protease (S16) C-terminal proteolytic domain At1D1108_45770 PF02190 ATP-dependent protease La (LON) substrate-binding domain At1D1108_45850 PF07859 alpha/beta hydrolase fold At1D1108_45880 PF07690 Major Facilitator Superfamily At1D1108_45910 PF01177 Asp/Glu/Hydantoin racemase At1D1108_45920 PF14525 AraC-binding-like domain At1D1108_45920 PF12833 Helix-turn-helix domain At1D1108_45930 PF00106 short chain dehydrogenase At1D1108_45960 PF01292 Prokaryotic cytochrome b561 At1D1108_45970 PF00174 Oxidoreductase molybdopterin binding domain At1D1108_45990 PF01817 Chorismate mutase type II At1D1108_45990 PF02153 Prephenate dehydrogenase At1D1108_46000 PF03466 LysR substrate binding domain At1D1108_46000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_46010 PF00106 short chain dehydrogenase At1D1108_46020 PF00561 alpha/beta hydrolase fold At1D1108_46040 PF17969 L,D-transpeptidase C-terminal domain At1D1108_46040 PF03734 L,D-transpeptidase catalytic domain At1D1108_46060 PF01042 Endoribonuclease L-PSP At1D1108_46090 PF10011 Predicted membrane protein (DUF2254) At1D1108_46110 PF13610 DDE domain At1D1108_46140 PF00106 short chain dehydrogenase At1D1108_46170 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_46180 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_46220 PF05114 Protein of unknown function (DUF692) At1D1108_46240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_46250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_46260 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_46260 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_46270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_46270 PF00005 ABC transporter At1D1108_46280 PF00005 ABC transporter At1D1108_46280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_46300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_46300 PF03466 LysR substrate binding domain At1D1108_46310 PF00144 Beta-lactamase At1D1108_46320 PF07519 Tannase and feruloyl esterase At1D1108_46330 PF01425 Amidase At1D1108_46350 PF01381 Helix-turn-helix At1D1108_46360 PF07804 HipA-like C-terminal domain At1D1108_46360 PF13657 HipA N-terminal domain At1D1108_46370 PF01381 Helix-turn-helix At1D1108_46380 PF05973 Phage derived protein Gp49-like (DUF891) At1D1108_46400 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At1D1108_46450 PF00586 AIR synthase related protein, N-terminal domain At1D1108_46450 PF02769 AIR synthase related protein, C-terminal domain At1D1108_46470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At1D1108_46470 PF04055 Radical SAM superfamily At1D1108_46480 PF00795 Carbon-nitrogen hydrolase At1D1108_46510 PF00392 Bacterial regulatory proteins, gntR family At1D1108_46510 PF00155 Aminotransferase class I and II At1D1108_46540 PF00440 Bacterial regulatory proteins, tetR family At1D1108_46560 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1108_46560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1108_46560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1108_46570 PF00561 alpha/beta hydrolase fold At1D1108_46580 PF01965 DJ-1/PfpI family At1D1108_46580 PF12833 Helix-turn-helix domain At1D1108_46600 PF02560 Cyanate lyase C-terminal domain At1D1108_46610 PF00484 Carbonic anhydrase At1D1108_46620 PF03466 LysR substrate binding domain At1D1108_46620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_46630 PF03466 LysR substrate binding domain At1D1108_46630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_46640 PF01336 OB-fold nucleic acid binding domain At1D1108_46640 PF01966 HD domain At1D1108_46660 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_46670 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_46680 PF00005 ABC transporter At1D1108_46690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1108_46690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1108_46710 PF01042 Endoribonuclease L-PSP At1D1108_46720 PF12833 Helix-turn-helix domain At1D1108_46720 PF06719 AraC-type transcriptional regulator N-terminus At1D1108_46750 PF06719 AraC-type transcriptional regulator N-terminus At1D1108_46750 PF12833 Helix-turn-helix domain At1D1108_46770 PF03466 LysR substrate binding domain At1D1108_46770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_46780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_46800 PF00106 short chain dehydrogenase At1D1108_46810 PF13610 DDE domain At1D1108_46830 PF00486 Transcriptional regulatory protein, C terminal At1D1108_46830 PF00072 Response regulator receiver domain At1D1108_46840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_46840 PF00672 HAMP domain At1D1108_46840 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_46890 PF00990 Diguanylate cyclase, GGDEF domain At1D1108_46890 PF17151 Periplasmic sensor domain At1D1108_46900 PF00672 HAMP domain At1D1108_46900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_46910 PF01638 HxlR-like helix-turn-helix At1D1108_46930 PF00106 short chain dehydrogenase At1D1108_46940 PF00106 short chain dehydrogenase At1D1108_46970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1108_46980 PF00356 Bacterial regulatory proteins, lacI family At1D1108_47000 PF02653 Branched-chain amino acid transport system / permease component At1D1108_47010 PF00005 ABC transporter At1D1108_47030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_47030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_47050 PF09957 Bacterial antitoxin of type II TA system, VapB At1D1108_47070 PF00106 short chain dehydrogenase At1D1108_47080 PF02627 Carboxymuconolactone decarboxylase family At1D1108_47100 PF05368 NmrA-like family At1D1108_47110 PF02082 Transcriptional regulator At1D1108_47120 PF00440 Bacterial regulatory proteins, tetR family At1D1108_47160 PF00440 Bacterial regulatory proteins, tetR family At1D1108_47180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_47180 PF00672 HAMP domain At1D1108_47180 PF02203 Tar ligand binding domain homologue At1D1108_47210 PF01068 ATP dependent DNA ligase domain At1D1108_47210 PF04679 ATP dependent DNA ligase C terminal region At1D1108_47210 PF13298 DNA polymerase Ligase (LigD) At1D1108_47220 PF01037 Lrp/AsnC ligand binding domain At1D1108_47230 PF00005 ABC transporter At1D1108_47240 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_47240 PF00005 ABC transporter At1D1108_47270 PF13458 Periplasmic binding protein At1D1108_47300 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_47310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_47320 PF00005 ABC transporter At1D1108_47340 PF00892 EamA-like transporter family At1D1108_47350 PF03807 NADP oxidoreductase coenzyme F420-dependent At1D1108_47350 PF14748 Pyrroline-5-carboxylate reductase dimerisation At1D1108_47360 PF07729 FCD domain At1D1108_47360 PF00392 Bacterial regulatory proteins, gntR family At1D1108_47370 PF06826 Predicted Permease Membrane Region At1D1108_47410 PF14579 Helix-hairpin-helix motif At1D1108_47410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1108_47410 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1108_47410 PF02811 PHP domain At1D1108_47450 PF05284 Protein of unknown function (DUF736) At1D1108_47470 PF00216 Bacterial DNA-binding protein At1D1108_47480 PF02534 Type IV secretory system Conjugative DNA transfer At1D1108_47510 PF17841 BID domain of Bartonella effector protein (Bep) At1D1108_47510 PF03389 MobA/MobL family At1D1108_47510 PF01443 Viral (Superfamily 1) RNA helicase At1D1108_47550 PF00005 ABC transporter At1D1108_47580 PF09339 IclR helix-turn-helix domain At1D1108_47580 PF01614 Bacterial transcriptional regulator At1D1108_47590 PF00171 Aldehyde dehydrogenase family At1D1108_47600 PF00465 Iron-containing alcohol dehydrogenase At1D1108_47610 PF00753 Metallo-beta-lactamase superfamily At1D1108_47660 PF03472 Autoinducer binding domain At1D1108_47660 PF00196 Bacterial regulatory proteins, luxR family At1D1108_47670 PF01965 DJ-1/PfpI family At1D1108_47720 PF00107 Zinc-binding dehydrogenase At1D1108_47720 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_47730 PF00043 Glutathione S-transferase, C-terminal domain At1D1108_47730 PF02798 Glutathione S-transferase, N-terminal domain At1D1108_47740 PF01638 HxlR-like helix-turn-helix At1D1108_47760 PF05368 NmrA-like family At1D1108_47770 PF16859 Tetracyclin repressor-like, C-terminal domain At1D1108_47770 PF00440 Bacterial regulatory proteins, tetR family At1D1108_47840 PF04956 TrbC/VIRB2 family At1D1108_47850 PF05101 Type IV secretory pathway, VirB3-like protein At1D1108_47860 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1108_47870 PF07996 Type IV secretion system proteins At1D1108_47890 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1108_47910 PF04335 VirB8 protein At1D1108_47920 PF03524 Conjugal transfer protein At1D1108_47930 PF03743 Bacterial conjugation TrbI-like protein At1D1108_47940 PF03743 Bacterial conjugation TrbI-like protein At1D1108_47950 PF00437 Type II/IV secretion system protein At1D1108_47970 PF14760 Rnk N-terminus At1D1108_47970 PF01272 Transcription elongation factor, GreA/GreB, C-term At1D1108_47980 PF01272 Transcription elongation factor, GreA/GreB, C-term At1D1108_47980 PF14760 Rnk N-terminus At1D1108_48000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain At1D1108_48000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase At1D1108_48040 PF00072 Response regulator receiver domain At1D1108_48040 PF13426 PAS domain At1D1108_48040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_48050 PF07536 HWE histidine kinase At1D1108_48050 PF13426 PAS domain At1D1108_48050 PF08447 PAS fold At1D1108_48060 PF00226 DnaJ domain At1D1108_48070 PF13454 FAD-NAD(P)-binding At1D1108_48080 PF01323 DSBA-like thioredoxin domain At1D1108_48090 PF01244 Membrane dipeptidase (Peptidase family M19) At1D1108_48110 PF08402 TOBE domain At1D1108_48110 PF00005 ABC transporter At1D1108_48120 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48130 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48140 PF00135 Carboxylesterase family At1D1108_48150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_48150 PF03466 LysR substrate binding domain At1D1108_48190 PF01850 PIN domain At1D1108_48200 PF00701 Dihydrodipicolinate synthetase family At1D1108_48210 PF08450 SMP-30/Gluconolactonase/LRE-like region At1D1108_48220 PF07729 FCD domain At1D1108_48220 PF00392 Bacterial regulatory proteins, gntR family At1D1108_48230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_48240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48250 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_48260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_48260 PF00005 ABC transporter At1D1108_48270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_48270 PF13378 Enolase C-terminal domain-like At1D1108_48330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_48340 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_48350 PF00072 Response regulator receiver domain At1D1108_48350 PF00196 Bacterial regulatory proteins, luxR family At1D1108_48360 PF07730 Histidine kinase At1D1108_48360 PF17200 Single Cache domain 2 At1D1108_48370 PF06965 Na+/H+ antiporter 1 At1D1108_48420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48430 PF08402 TOBE domain At1D1108_48430 PF00005 ABC transporter At1D1108_48440 PF00459 Inositol monophosphatase family At1D1108_48450 PF01594 AI-2E family transporter At1D1108_48480 PF05035 2-keto-3-deoxy-galactonokinase At1D1108_48490 PF00701 Dihydrodipicolinate synthetase family At1D1108_48500 PF13378 Enolase C-terminal domain-like At1D1108_48500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_48520 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48530 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_48540 PF17912 MalK OB fold domain At1D1108_48540 PF00005 ABC transporter At1D1108_48550 PF16363 GDP-mannose 4,6 dehydratase At1D1108_48560 PF09339 IclR helix-turn-helix domain At1D1108_48560 PF01614 Bacterial transcriptional regulator At1D1108_48580 PF12833 Helix-turn-helix domain At1D1108_48580 PF02311 AraC-like ligand binding domain At1D1108_48620 PF13533 Biotin-lipoyl like At1D1108_48630 PF00561 alpha/beta hydrolase fold At1D1108_48640 PF01032 FecCD transport family At1D1108_48650 PF00005 ABC transporter At1D1108_48670 PF00593 TonB dependent receptor At1D1108_48670 PF07715 TonB-dependent Receptor Plug Domain At1D1108_48680 PF01497 Periplasmic binding protein At1D1108_48700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_48700 PF03466 LysR substrate binding domain At1D1108_48710 PF00248 Aldo/keto reductase family At1D1108_48720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_48720 PF03466 LysR substrate binding domain At1D1108_48730 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_48730 PF00107 Zinc-binding dehydrogenase At1D1108_48740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At1D1108_48740 PF00356 Bacterial regulatory proteins, lacI family At1D1108_48750 PF01261 Xylose isomerase-like TIM barrel At1D1108_48760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_48760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_48770 PF01261 Xylose isomerase-like TIM barrel At1D1108_48810 PF00005 ABC transporter At1D1108_48820 PF01032 FecCD transport family At1D1108_48840 PF00593 TonB dependent receptor At1D1108_48840 PF07715 TonB-dependent Receptor Plug Domain At1D1108_48880 PF07238 PilZ domain At1D1108_48880 PF03552 Cellulose synthase At1D1108_48880 PF00535 Glycosyl transferase family 2 At1D1108_48910 PF01717 Cobalamin-independent synthase, Catalytic domain At1D1108_48910 PF08267 Cobalamin-independent synthase, N-terminal domain At1D1108_48930 PF00106 short chain dehydrogenase At1D1108_48940 PF04198 Putative sugar-binding domain At1D1108_48950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1108_48950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1108_48960 PF02779 Transketolase, pyrimidine binding domain At1D1108_48960 PF02780 Transketolase, C-terminal domain At1D1108_48970 PF00456 Transketolase, thiamine diphosphate binding domain At1D1108_48980 PF02653 Branched-chain amino acid transport system / permease component At1D1108_48990 PF13407 Periplasmic binding protein domain At1D1108_49000 PF00005 ABC transporter At1D1108_49020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At1D1108_49030 PF13188 PAS domain At1D1108_49030 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_49030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_49030 PF08448 PAS fold At1D1108_49030 PF00072 Response regulator receiver domain At1D1108_49040 PF06745 KaiC At1D1108_49050 PF00440 Bacterial regulatory proteins, tetR family At1D1108_49080 PF07690 Major Facilitator Superfamily At1D1108_49090 PF01425 Amidase At1D1108_49120 PF00005 ABC transporter At1D1108_49130 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_49140 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_49150 PF02678 Pirin At1D1108_49150 PF17954 Quercetinase C-terminal cupin domain At1D1108_49160 PF00857 Isochorismatase family At1D1108_49170 PF03466 LysR substrate binding domain At1D1108_49170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_49180 PF01638 HxlR-like helix-turn-helix At1D1108_49190 PF08659 KR domain At1D1108_49190 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_49190 PF00107 Zinc-binding dehydrogenase At1D1108_49190 PF16197 Ketoacyl-synthetase C-terminal extension At1D1108_49190 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1108_49190 PF00698 Acyl transferase domain At1D1108_49190 PF00550 Phosphopantetheine attachment site At1D1108_49190 PF14765 Polyketide synthase dehydratase At1D1108_49190 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1108_49200 PF03466 LysR substrate binding domain At1D1108_49200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_49240 PF00175 Oxidoreductase NAD-binding domain At1D1108_49240 PF00042 Globin At1D1108_49240 PF00970 Oxidoreductase FAD-binding domain At1D1108_49250 PF02798 Glutathione S-transferase, N-terminal domain At1D1108_49260 PF00171 Aldehyde dehydrogenase family At1D1108_49270 PF03466 LysR substrate binding domain At1D1108_49270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_49320 PF00455 DeoR C terminal sensor domain At1D1108_49320 PF08220 DeoR-like helix-turn-helix domain At1D1108_49330 PF13407 Periplasmic binding protein domain At1D1108_49340 PF00005 ABC transporter At1D1108_49350 PF02653 Branched-chain amino acid transport system / permease component At1D1108_49360 PF02653 Branched-chain amino acid transport system / permease component At1D1108_49380 PF00294 pfkB family carbohydrate kinase At1D1108_49380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At1D1108_49390 PF01791 DeoC/LacD family aldolase At1D1108_49400 PF00171 Aldehyde dehydrogenase family At1D1108_49410 PF00795 Carbon-nitrogen hydrolase At1D1108_49420 PF09383 NIL domain At1D1108_49420 PF00005 ABC transporter At1D1108_49430 PF00005 ABC transporter At1D1108_49430 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_49450 PF02653 Branched-chain amino acid transport system / permease component At1D1108_49460 PF13458 Periplasmic binding protein At1D1108_49490 PF05985 Ethanolamine ammonia-lyase light chain (EutC) At1D1108_49500 PF06751 Ethanolamine ammonia lyase large subunit (EutB) At1D1108_49510 PF00459 Inositol monophosphatase family At1D1108_49540 PF01546 Peptidase family M20/M25/M40 At1D1108_49550 PF00455 DeoR C terminal sensor domain At1D1108_49550 PF08220 DeoR-like helix-turn-helix domain At1D1108_49560 PF00005 ABC transporter At1D1108_49560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_49570 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_49570 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_49580 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_49590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_49610 PF17912 MalK OB fold domain At1D1108_49610 PF00005 ABC transporter At1D1108_49620 PF00107 Zinc-binding dehydrogenase At1D1108_49620 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_49630 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_49640 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_49650 PF01547 Bacterial extracellular solute-binding protein At1D1108_49680 PF12833 Helix-turn-helix domain At1D1108_49690 PF00593 TonB dependent receptor At1D1108_49690 PF07715 TonB-dependent Receptor Plug Domain At1D1108_49720 PF00183 Hsp90 protein At1D1108_49730 PF13649 Methyltransferase domain At1D1108_49740 PF01161 Phosphatidylethanolamine-binding protein At1D1108_49850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_49860 PF00881 Nitroreductase family At1D1108_49870 PF01979 Amidohydrolase family At1D1108_49890 PF02653 Branched-chain amino acid transport system / permease component At1D1108_49890 PF11862 Domain of unknown function (DUF3382) At1D1108_49900 PF02653 Branched-chain amino acid transport system / permease component At1D1108_49910 PF13458 Periplasmic binding protein At1D1108_49920 PF00005 ABC transporter At1D1108_49930 PF00005 ABC transporter At1D1108_49930 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_49940 PF00440 Bacterial regulatory proteins, tetR family At1D1108_49950 PF03466 LysR substrate binding domain At1D1108_49950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_49960 PF00248 Aldo/keto reductase family At1D1108_49990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1108_49990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At1D1108_50000 PF00005 ABC transporter At1D1108_50020 PF02653 Branched-chain amino acid transport system / permease component At1D1108_50040 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1108_50040 PF00005 ABC transporter At1D1108_50050 PF00296 Luciferase-like monooxygenase At1D1108_50060 PF03358 NADPH-dependent FMN reductase At1D1108_50070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_50070 PF03466 LysR substrate binding domain At1D1108_50120 PF00313 'Cold-shock' DNA-binding domain At1D1108_50150 PF01225 Mur ligase family, catalytic domain At1D1108_50150 PF02875 Mur ligase family, glutamate ligase domain At1D1108_50150 PF08245 Mur ligase middle domain At1D1108_50160 PF13533 Biotin-lipoyl like At1D1108_50170 PF03412 Peptidase C39 family At1D1108_50170 PF00664 ABC transporter transmembrane region At1D1108_50170 PF00005 ABC transporter At1D1108_50190 PF02321 Outer membrane efflux protein At1D1108_50200 PF01810 LysE type translocator At1D1108_50220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_50220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_50230 PF00005 ABC transporter At1D1108_50240 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_50250 PF00356 Bacterial regulatory proteins, lacI family At1D1108_50260 PF00376 MerR family regulatory protein At1D1108_50260 PF13614 AAA domain At1D1108_50270 PF02195 ParB-like nuclease domain At1D1108_50270 PF07506 RepB plasmid partitioning protein At1D1108_50280 PF11800 Replication protein C C-terminal region At1D1108_50280 PF03428 Replication protein C N-terminal domain At1D1108_50310 PF04471 Restriction endonuclease At1D1108_50320 PF00589 Phage integrase family At1D1108_50320 PF02899 Phage integrase, N-terminal SAM-like domain At1D1108_50380 PF00239 Resolvase, N terminal domain At1D1108_50390 PF11972 HTH DNA binding domain At1D1108_50390 PF07756 Protein of unknown function (DUF1612) At1D1108_50410 PF02384 N-6 DNA Methylase At1D1108_50470 PF01494 FAD binding domain At1D1108_50480 PF03466 LysR substrate binding domain At1D1108_50480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_50490 PF07690 Major Facilitator Superfamily At1D1108_50490 PF00083 Sugar (and other) transporter At1D1108_50500 PF00456 Transketolase, thiamine diphosphate binding domain At1D1108_50510 PF02779 Transketolase, pyrimidine binding domain At1D1108_50510 PF02780 Transketolase, C-terminal domain At1D1108_50520 PF00171 Aldehyde dehydrogenase family At1D1108_50530 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_50530 PF00107 Zinc-binding dehydrogenase At1D1108_50540 PF08501 Shikimate dehydrogenase substrate binding domain At1D1108_50540 PF01488 Shikimate / quinate 5-dehydrogenase At1D1108_50540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At1D1108_50550 PF00465 Iron-containing alcohol dehydrogenase At1D1108_50590 PF07729 FCD domain At1D1108_50590 PF00392 Bacterial regulatory proteins, gntR family At1D1108_50610 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1108_50630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1108_50640 PF01614 Bacterial transcriptional regulator At1D1108_50640 PF09339 IclR helix-turn-helix domain At1D1108_50650 PF13610 DDE domain At1D1108_50700 PF00248 Aldo/keto reductase family At1D1108_50720 PF12833 Helix-turn-helix domain At1D1108_50720 PF12852 Cupin At1D1108_50740 PF00593 TonB dependent receptor At1D1108_50740 PF07715 TonB-dependent Receptor Plug Domain At1D1108_50750 PF12833 Helix-turn-helix domain At1D1108_50750 PF02311 AraC-like ligand binding domain At1D1108_50810 PF00106 short chain dehydrogenase At1D1108_50820 PF00557 Metallopeptidase family M24 At1D1108_50830 PF01638 HxlR-like helix-turn-helix At1D1108_50850 PF03358 NADPH-dependent FMN reductase At1D1108_50900 PF00440 Bacterial regulatory proteins, tetR family At1D1108_50910 PF00873 AcrB/AcrD/AcrF family At1D1108_50920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1108_50940 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_50950 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_50960 PF17912 MalK OB fold domain At1D1108_50960 PF00005 ABC transporter At1D1108_50960 PF03459 TOBE domain At1D1108_50980 PF13378 Enolase C-terminal domain-like At1D1108_50980 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_51000 PF00107 Zinc-binding dehydrogenase At1D1108_51000 PF08240 Alcohol dehydrogenase GroES-like domain At1D1108_51020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_51020 PF13378 Enolase C-terminal domain-like At1D1108_51030 PF00665 Integrase core domain At1D1108_51030 PF13333 Integrase core domain At1D1108_51030 PF13276 HTH-like domain At1D1108_51050 PF13378 Enolase C-terminal domain-like At1D1108_51050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_51060 PF00106 short chain dehydrogenase At1D1108_51080 PF00171 Aldehyde dehydrogenase family At1D1108_51090 PF03786 D-mannonate dehydratase (UxuA) At1D1108_51110 PF00920 Dehydratase family At1D1108_51120 PF07690 Major Facilitator Superfamily At1D1108_51140 PF03737 Aldolase/RraA At1D1108_51150 PF01614 Bacterial transcriptional regulator At1D1108_51150 PF09339 IclR helix-turn-helix domain At1D1108_51170 PF03401 Tripartite tricarboxylate transporter family receptor At1D1108_51180 PF07331 Tripartite tricarboxylate transporter TctB family At1D1108_51190 PF01970 Tripartite tricarboxylate transporter TctA family At1D1108_51200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_51200 PF03466 LysR substrate binding domain At1D1108_51210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_51210 PF13378 Enolase C-terminal domain-like At1D1108_51220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1108_51220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1108_51240 PF00005 ABC transporter At1D1108_51250 PF02653 Branched-chain amino acid transport system / permease component At1D1108_51260 PF13407 Periplasmic binding protein domain At1D1108_51270 PF01261 Xylose isomerase-like TIM barrel At1D1108_51280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_51280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_51290 PF01261 Xylose isomerase-like TIM barrel At1D1108_51300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1108_51300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1108_51310 PF00294 pfkB family carbohydrate kinase At1D1108_51320 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1108_51320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1108_51320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1108_51330 PF04962 KduI/IolB family At1D1108_51340 PF14552 Tautomerase enzyme At1D1108_51350 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_51360 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_51370 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_51380 PF00005 ABC transporter At1D1108_51390 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_51410 PF13378 Enolase C-terminal domain-like At1D1108_51410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_51420 PF00326 Prolyl oligopeptidase family At1D1108_51430 PF01614 Bacterial transcriptional regulator At1D1108_51430 PF09339 IclR helix-turn-helix domain At1D1108_51440 PF03737 Aldolase/RraA At1D1108_51470 PF00171 Aldehyde dehydrogenase family At1D1108_51490 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_51500 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_51510 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1108_51520 PF00005 ABC transporter At1D1108_51530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1108_51530 PF13378 Enolase C-terminal domain-like At1D1108_51540 PF01370 NAD dependent epimerase/dehydratase family At1D1108_51570 PF00765 Autoinducer synthase At1D1108_51620 PF02195 ParB-like nuclease domain At1D1108_51620 PF17762 HTH domain found in ParB protein At1D1108_51660 PF13362 Toprim domain At1D1108_51660 PF18818 Metallopeptidase superfamily domain At1D1108_51660 PF08401 Domain of unknown function (DUF1738) At1D1108_51680 PF05284 Protein of unknown function (DUF736) At1D1108_51700 PF01638 HxlR-like helix-turn-helix At1D1108_51740 PF01695 IstB-like ATP binding protein At1D1108_51750 PF00665 Integrase core domain At1D1108_51790 PF02534 Type IV secretory system Conjugative DNA transfer At1D1108_51800 PF06412 Conjugal transfer protein TraD At1D1108_51810 PF07820 TraC-like protein At1D1108_51820 PF03389 MobA/MobL family At1D1108_51820 PF17841 BID domain of Bartonella effector protein (Bep) At1D1108_51820 PF01443 Viral (Superfamily 1) RNA helicase At1D1108_51830 PF10502 Signal peptidase, peptidase S26 At1D1108_51840 PF00795 Carbon-nitrogen hydrolase At1D1108_51850 PF06871 TraH_2 At1D1108_51880 PF03472 Autoinducer binding domain At1D1108_51880 PF00196 Bacterial regulatory proteins, luxR family At1D1108_51890 PF09228 Prokaryotic Transcriptional repressor TraM At1D1108_51910 PF03743 Bacterial conjugation TrbI-like protein At1D1108_51920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site At1D1108_51930 PF03524 Conjugal transfer protein At1D1108_51940 PF04335 VirB8 protein At1D1108_51950 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1108_51980 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1108_51990 PF05101 Type IV secretory pathway, VirB3-like protein At1D1108_52000 PF04956 TrbC/VIRB2 family At1D1108_52010 PF00437 Type II/IV secretion system protein At1D1108_52020 PF13614 AAA domain At1D1108_52030 PF02195 ParB-like nuclease domain At1D1108_52030 PF07506 RepB plasmid partitioning protein At1D1108_52040 PF11800 Replication protein C C-terminal region At1D1108_52040 PF03428 Replication protein C N-terminal domain At1D1108_52050 PF00239 Resolvase, N terminal domain At1D1108_52060 PF07756 Protein of unknown function (DUF1612) At1D1108_52060 PF11972 HTH DNA binding domain At1D1108_52090 PF07690 Major Facilitator Superfamily At1D1108_52110 PF08808 RES domain At1D1108_52180 PF00589 Phage integrase family At1D1108_52180 PF02899 Phage integrase, N-terminal SAM-like domain At1D1108_52190 PF00293 NUDIX domain At1D1108_52230 PF13332 Hemagglutinin repeat At1D1108_52230 PF02661 Fic/DOC family At1D1108_52230 PF05860 haemagglutination activity domain At1D1108_52230 PF13018 Extended Signal Peptide of Type V secretion system At1D1108_52230 PF03543 Yersinia/Haemophilus virulence surface antigen At1D1108_52280 PF17762 HTH domain found in ParB protein At1D1108_52280 PF02195 ParB-like nuclease domain At1D1108_52330 PF03831 PhnA domain At1D1108_52330 PF08274 PhnA Zinc-Ribbon At1D1108_52370 PF01810 LysE type translocator At1D1108_52460 PF00293 NUDIX domain At1D1108_52490 PF05284 Protein of unknown function (DUF736) At1D1108_52510 PF00216 Bacterial DNA-binding protein At1D1108_52560 PF02534 Type IV secretory system Conjugative DNA transfer At1D1108_52570 PF06412 Conjugal transfer protein TraD At1D1108_52580 PF07820 TraC-like protein At1D1108_52590 PF03389 MobA/MobL family At1D1108_52590 PF17841 BID domain of Bartonella effector protein (Bep) At1D1108_52590 PF01443 Viral (Superfamily 1) RNA helicase At1D1108_52600 PF10502 Signal peptidase, peptidase S26 At1D1108_52610 PF00795 Carbon-nitrogen hydrolase At1D1108_52620 PF06871 TraH_2 At1D1108_52630 PF09228 Prokaryotic Transcriptional repressor TraM At1D1108_52640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1108_52640 PF08447 PAS fold At1D1108_52640 PF13426 PAS domain At1D1108_52660 PF00196 Bacterial regulatory proteins, luxR family At1D1108_52660 PF03472 Autoinducer binding domain At1D1108_52670 PF00128 Alpha amylase, catalytic domain At1D1108_52680 PF02690 Na+/Pi-cotransporter At1D1108_52690 PF00455 DeoR C terminal sensor domain At1D1108_52690 PF08220 DeoR-like helix-turn-helix domain At1D1108_52700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_52710 PF00005 ABC transporter At1D1108_52710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_52720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_52720 PF00005 ABC transporter At1D1108_52730 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_52740 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1108_52740 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_52750 PF03009 Glycerophosphoryl diester phosphodiesterase family At1D1108_52760 PF00459 Inositol monophosphatase family At1D1108_52790 PF00665 Integrase core domain At1D1108_52810 PF00067 Cytochrome P450 At1D1108_52820 PF00067 Cytochrome P450 At1D1108_52830 PF01548 Transposase At1D1108_52830 PF02371 Transposase IS116/IS110/IS902 family At1D1108_52850 PF06903 VirK protein At1D1108_52920 PF00512 His Kinase A (phospho-acceptor) domain At1D1108_52920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1108_52930 PF01464 Transglycosylase SLT domain At1D1108_52940 PF04956 TrbC/VIRB2 family At1D1108_52950 PF05101 Type IV secretory pathway, VirB3-like protein At1D1108_52960 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1108_52980 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1108_52985 PF17413 Outer membrane lipoprotein virB7 At1D1108_52990 PF04335 VirB8 protein At1D1108_53000 PF03524 Conjugal transfer protein At1D1108_53010 PF03743 Bacterial conjugation TrbI-like protein At1D1108_53020 PF00437 Type II/IV secretion system protein At1D1108_53030 PF00072 Response regulator receiver domain At1D1108_53030 PF00486 Transcriptional regulatory protein, C terminal At1D1108_53040 PF07181 VirC2 protein At1D1108_53050 PF07015 VirC1 protein At1D1108_53060 PF07328 T-DNA border endonuclease VirD1 At1D1108_53070 PF03432 Relaxase/Mobilisation nuclease domain At1D1108_53090 PF02534 Type IV secretory system Conjugative DNA transfer At1D1108_53110 PF12189 Single-strand DNA-binding protein At1D1108_53120 PF07229 VirE2 At1D1108_53150 PF03472 Autoinducer binding domain At1D1108_53150 PF00196 Bacterial regulatory proteins, luxR family At1D1108_53180 PF00459 Inositol monophosphatase family At1D1108_53250 PF02027 RolB/RolC glucosidase family At1D1108_53260 PF01425 Amidase At1D1108_53270 PF02027 RolB/RolC glucosidase family At1D1108_53270 PF01593 Flavin containing amine oxidoreductase At1D1108_53290 PF02027 RolB/RolC glucosidase family At1D1108_53300 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain At1D1108_53330 PF00005 ABC transporter At1D1108_53330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1108_53350 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_53360 PF01266 FAD dependent oxidoreductase At1D1108_53370 PF17806 Sarcosine oxidase A3 domain At1D1108_53370 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1108_53390 PF01266 FAD dependent oxidoreductase At1D1108_53400 PF03466 LysR substrate binding domain At1D1108_53400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_53410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1108_53420 PF05378 Hydantoinase/oxoprolinase N-terminal region At1D1108_53420 PF01968 Hydantoinase/oxoprolinase At1D1108_53440 PF17763 Glutaminase/Asparaginase C-terminal domain At1D1108_53440 PF00710 Asparaginase, N-terminal At1D1108_53450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1108_53450 PF03466 LysR substrate binding domain At1D1108_53470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1108_53510 PF03743 Bacterial conjugation TrbI-like protein At1D1108_53530 PF03524 Conjugal transfer protein At1D1108_53540 PF04335 VirB8 protein At1D1108_53550 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1108_53560 PF10907 Protein of unknown function (DUF2749) At1D1108_53580 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1108_53590 PF05101 Type IV secretory pathway, VirB3-like protein At1D1108_53600 PF04956 TrbC/VIRB2 family At1D1108_53610 PF00437 Type II/IV secretion system protein At1D1108_53620 PF00765 Autoinducer synthase