locus-tag	class	description
At1D1460_00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
At1D1460_00020	COG0635	Involved in the biosynthesis of porphyrin-containing compound
At1D1460_00030	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
At1D1460_00040	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
At1D1460_00050	COG1420	regulation of RNA biosynthetic process
At1D1460_00060	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
At1D1460_00070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
At1D1460_00080	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
At1D1460_00100	COG1137	ATPase activity
At1D1460_00110	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
At1D1460_00130	COG0616	signal peptide processing
At1D1460_00140	COG0776	regulation of translation
At1D1460_00160	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
At1D1460_00170	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
At1D1460_00180	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
At1D1460_00210	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
At1D1460_00220	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
At1D1460_00230	COG0728	peptidoglycan biosynthetic process
At1D1460_00250	COG0180	Tryptophanyl-tRNA synthetase
At1D1460_00270	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
At1D1460_00280	COG1214	PFAM Peptidase M22, glycoprotease
At1D1460_00320	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
At1D1460_00330	COG1702	phosphate starvation-inducible protein PhoH
At1D1460_00340	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
At1D1460_00360	COG0815	Transfers the fatty acyl group on membrane lipoproteins
At1D1460_00370	COG1396	sequence-specific DNA binding
At1D1460_00380	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
At1D1460_00390	COG0220	tRNA (guanine-N7-)-methyltransferase activity
At1D1460_00400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_00420	COG0242	peptide deformylase activity
At1D1460_00430	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
At1D1460_00440	COG0101	tRNA pseudouridine synthase activity
At1D1460_00460	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
At1D1460_00470	COG2171	N-acyltransferase activity
At1D1460_00490	COG0840	transmembrane signaling receptor activity
At1D1460_00500	COG1957	nucleoside hydrolase
At1D1460_00510	COG0071	Belongs to the small heat shock protein (HSP20) family
At1D1460_00560	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
At1D1460_00580	COG0218	Necessary for normal cell division and for the maintenance of normal septation
At1D1460_00590	COG0706	membrane insertase activity
At1D1460_00600	COG0594	ribonuclease P activity
At1D1460_00610	COG0840	transmembrane signaling receptor activity
At1D1460_00640	COG2226	methyltransferase
At1D1460_00650	COG3842	ATPase activity
At1D1460_00660	COG1175	transmembrane transport
At1D1460_00670	COG0395	ABC-type sugar transport system, permease component
At1D1460_00700	COG0427	acetyl-CoA hydrolase
At1D1460_00720	COG3938	Belongs to the proline racemase family
At1D1460_00730	COG0418	dihydroorotase activity
At1D1460_00740	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
At1D1460_00780	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
At1D1460_00790	COG0166	Belongs to the GPI family
At1D1460_00800	COG0318	PFAM AMP-dependent synthetase and ligase
At1D1460_00810	COG3842	ATPase activity
At1D1460_00820	COG1840	ABC-type Fe3 transport system, periplasmic component
At1D1460_00830	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
At1D1460_00840	COG4774	siderophore transport
At1D1460_00910	COG0515	serine threonine protein kinase
At1D1460_00910	COG2815	serine threonine protein kinase
At1D1460_00990	COG2326	polyphosphate kinase activity
At1D1460_01000	COG5002	protein histidine kinase activity
At1D1460_01010	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
At1D1460_01020	COG0573	inorganic phosphate transmembrane transporter activity
At1D1460_01040	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
At1D1460_01050	COG0704	Plays a role in the regulation of phosphate uptake
At1D1460_01060	COG0745	RESPONSE REGULATOR receiver
At1D1460_01080	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
At1D1460_01090	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
At1D1460_01100	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
At1D1460_01110	COG2967	ApaG domain
At1D1460_01130	COG0717	Belongs to the dCTP deaminase family
At1D1460_01140	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
At1D1460_01150	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
At1D1460_01260	COG0167	dihydroorotate dehydrogenase activity
At1D1460_01290	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
At1D1460_01330	COG1959	2 iron, 2 sulfur cluster binding
At1D1460_01340	COG1201	RNA secondary structure unwinding
At1D1460_01400	COG1960	acyl-CoA dehydrogenase activity
At1D1460_01410	COG0183	Belongs to the thiolase family
At1D1460_01430	COG1024	Enoyl-CoA hydratase
At1D1460_01430	COG1250	3-hydroxyacyl-CoA dehydrogenase
At1D1460_01480	COG1320	monovalent cation:proton antiporter activity
At1D1460_01490	COG2212	antiporter activity
At1D1460_01500	COG1863	multisubunit Na H antiporter MnhE subunit
At1D1460_01510	COG0651	ATP synthesis coupled electron transport
At1D1460_01520	COG1006	Multisubunit Na H antiporter MnhC subunit
At1D1460_01530	COG2111	Na H antiporter
At1D1460_01530	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
At1D1460_01550	COG0840	transmembrane signaling receptor activity
At1D1460_01580	COG2198	Histidine kinase
At1D1460_01580	COG0643	Histidine kinase
At1D1460_01590	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
At1D1460_01600	COG2201	protein-glutamate methylesterase activity
At1D1460_01610	COG0745	RESPONSE REGULATOR receiver
At1D1460_01620	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
At1D1460_01640	COG1766	The M ring may be actively involved in energy transduction
At1D1460_01650	COG2771	luxR family
At1D1460_01670	COG2972	Histidine kinase
At1D1460_01670	COG0840	transmembrane signaling receptor activity
At1D1460_01680	COG2205	protein histidine kinase activity
At1D1460_01680	COG2198	Histidine kinase
At1D1460_01680	COG0784	Response regulator, receiver
At1D1460_01690	COG1970	mechanosensitive ion channel activity
At1D1460_01700	COG0436	Aminotransferase
At1D1460_01730	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
At1D1460_01740	COG0424	maF-like protein
At1D1460_01750	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
At1D1460_01770	COG5328	Belongs to the UPF0262 family
At1D1460_01780	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
At1D1460_01800	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
At1D1460_01830	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
At1D1460_01850	COG1338	Plays a role in the flagellum-specific transport system
At1D1460_01870	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
At1D1460_01890	COG1706	bacterial-type flagellum-dependent cell motility
At1D1460_01900	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
At1D1460_01910	COG4786	Flagellar basal body rod
At1D1460_01920	COG1677	Flagellar hook-basal body complex protein FliE
At1D1460_01930	COG1558	bacterial-type flagellum-dependent cell motility
At1D1460_01940	COG1815	bacterial-type flagellum-dependent cell motility
At1D1460_01960	COG1157	protein secretion by the type III secretion system
At1D1460_01970	COG4786	Flagellar basal body rod
At1D1460_01990	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
At1D1460_02000	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
At1D1460_02010	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
At1D1460_02020	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
At1D1460_02030	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
At1D1460_02070	COG1360	Flagellar Motor Protein
At1D1460_02160	COG5443	negative regulation of bacterial-type flagellum assembly
At1D1460_02170	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
At1D1460_02190	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
At1D1460_02270	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
At1D1460_02280	COG1609	Transcriptional regulator
At1D1460_02290	COG1653	transport
At1D1460_02300	COG1175	transmembrane transport
At1D1460_02310	COG0395	ABC-type sugar transport system, permease component
At1D1460_02320	COG0366	Alpha amylase catalytic
At1D1460_02330	COG3842	ATPase activity
At1D1460_02360	COG0129	dihydroxy-acid dehydratase activity
At1D1460_02370	COG0363	glucosamine-6-phosphate deaminase activity
At1D1460_02380	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
At1D1460_02390	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_02410	COG2081	HI0933 family
At1D1460_02450	COG2224	Isocitrate lyase
At1D1460_02480	COG3842	ATPase activity
At1D1460_02490	COG1176	ABC-type spermidine putrescine transport system, permease component I
At1D1460_02500	COG1177	transmembrane transport
At1D1460_02520	COG2205	protein histidine kinase activity
At1D1460_02530	COG0248	Ppx GppA phosphatase
At1D1460_02540	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
At1D1460_02550	COG0477	Major facilitator Superfamily
At1D1460_02610	COG0521	Mo-molybdopterin cofactor biosynthetic process
At1D1460_02620	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
At1D1460_02640	COG0142	geranyltranstransferase activity
At1D1460_02690	COG0752	glycyl-tRNA synthetase alpha subunit
At1D1460_02710	COG1704	LemA family
At1D1460_02720	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
At1D1460_02740	COG0751	glycine-tRNA ligase activity
At1D1460_02750	COG1683	Conserved Protein
At1D1460_02760	COG0840	transmembrane signaling receptor activity
At1D1460_02780	COG0151	Belongs to the GarS family
At1D1460_02790	COG2183	response to ionizing radiation
At1D1460_02800	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
At1D1460_02850	COG0583	DNA-binding transcription factor activity
At1D1460_02890	COG0306	phosphate transporter
At1D1460_02910	COG0561	phosphatase activity
At1D1460_02920	COG0438	transferase activity, transferring glycosyl groups
At1D1460_02930	COG2186	Transcriptional regulator
At1D1460_02950	COG0583	DNA-binding transcription factor activity
At1D1460_02960	COG0277	FAD linked oxidase domain protein
At1D1460_02980	COG0247	lactate metabolic process
At1D1460_03000	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_03010	COG2818	Glycosylase
At1D1460_03030	COG2855	membrane
At1D1460_03040	COG0583	DNA-binding transcription factor activity
At1D1460_03100	COG0124	histidyl-tRNA synthetase
At1D1460_03120	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
At1D1460_03130	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
At1D1460_03140	COG2259	Doxx family
At1D1460_03160	COG0459	protein refolding
At1D1460_03170	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
At1D1460_03190	COG0196	riboflavin kinase activity
At1D1460_03200	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
At1D1460_03220	COG0590	tRNA wobble adenosine to inosine editing
At1D1460_03230	COG1187	pseudouridine synthase activity
At1D1460_03240	COG0742	ribosomal rna small subunit methyltransferase
At1D1460_03250	COG1752	Esterase of the alpha-beta hydrolase superfamily
At1D1460_03270	COG0312	modulator of DNA gyrase
At1D1460_03280	COG0483	inositol monophosphate 1-phosphatase activity
At1D1460_03300	COG1519	Transferase
At1D1460_03320	COG1663	tetraacyldisaccharide 4'-kinase activity
At1D1460_03350	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
At1D1460_03360	COG0745	RESPONSE REGULATOR receiver
At1D1460_03370	COG5001	Diguanylate cyclase
At1D1460_03370	COG3300	MHYT domain
At1D1460_03380	COG3386	PFAM SMP-30 Gluconolaconase
At1D1460_03390	COG0800	Aldolase
At1D1460_03400	COG3734	2-keto-3-deoxy-galactonokinase
At1D1460_03410	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_03420	COG1414	Transcriptional regulator
At1D1460_03430	COG2197	response regulator
At1D1460_03460	COG0598	Magnesium transport protein CorA
At1D1460_03470	COG3158	transport of potassium into the cell
At1D1460_03500	COG0356	it plays a direct role in the translocation of protons across the membrane
At1D1460_03520	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
At1D1460_03530	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
At1D1460_03560	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
At1D1460_03600	COG0009	L-threonylcarbamoyladenylate synthase
At1D1460_03620	COG4638	Rieske (2fe-2S)
At1D1460_03670	COG1960	acyl-CoA dehydrogenase activity
At1D1460_03700	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
At1D1460_03710	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
At1D1460_03720	COG0840	transmembrane signaling receptor activity
At1D1460_03740	COG1522	sequence-specific DNA binding
At1D1460_03790	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
At1D1460_03800	COG1741	Belongs to the pirin family
At1D1460_03810	COG1722	exodeoxyribonuclease VII activity
At1D1460_03820	COG0123	including yeast histone deacetylase and acetoin utilization protein
At1D1460_03830	COG1268	BioY protein
At1D1460_03840	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
At1D1460_03850	COG1122	ATPase activity
At1D1460_03860	COG3214	Protein conserved in bacteria
At1D1460_03880	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
At1D1460_03910	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
At1D1460_03940	COG0259	pyridoxamine-phosphate oxidase activity
At1D1460_04000	COG0312	modulator of DNA gyrase
At1D1460_04030	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
At1D1460_04040	COG0109	protoheme IX farnesyltransferase activity
At1D1460_04060	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
At1D1460_04090	COG3346	SURF1 family
At1D1460_04100	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
At1D1460_04110	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
At1D1460_04120	COG0328	RNA-DNA hybrid ribonuclease activity
At1D1460_04140	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
At1D1460_04140	COG0678	peroxiredoxin activity
At1D1460_04160	COG1678	Uncharacterized ACR, COG1678
At1D1460_04170	COG3237	CsbD-like
At1D1460_04190	COG5001	Diguanylate cyclase
At1D1460_04190	COG3300	MHYT domain
At1D1460_04200	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
At1D1460_04210	COG0612	Peptidase, M16
At1D1460_04260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
At1D1460_04270	COG1802	Transcriptional regulator
At1D1460_04300	COG2189	Belongs to the N(4) N(6)-methyltransferase family
At1D1460_04310	COG3609	addiction module antidote protein, CC2985 family
At1D1460_04320	COG3668	Plasmid stabilization system
At1D1460_04340	COG1194	a g-specific adenine glycosylase
At1D1460_04370	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
At1D1460_04380	COG1196	nuclear chromosome segregation
At1D1460_04390	COG2514	catechol 2,3-dioxygenase activity
At1D1460_04400	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
At1D1460_04400	COG0574	Belongs to the PEP-utilizing enzyme family
At1D1460_04480	COG0579	oxidoreductase
At1D1460_04500	COG2895	sulfate adenylyltransferase (ATP) activity
At1D1460_04510	COG0175	sulfate reduction
At1D1460_04520	COG0175	sulfate reduction
At1D1460_04530	COG1959	2 iron, 2 sulfur cluster binding
At1D1460_04540	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
At1D1460_04550	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
At1D1460_04560	COG4208	sulfate ABC transporter
At1D1460_04570	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
At1D1460_04590	COG2203	Gaf domain
At1D1460_04590	COG2200	EAL domain
At1D1460_04590	COG2199	diguanylate cyclase activity
At1D1460_04610	COG1309	transcriptional regulator
At1D1460_04620	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_04630	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
At1D1460_04700	COG0625	glutathione transferase activity
At1D1460_04720	COG0477	Major facilitator Superfamily
At1D1460_04740	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
At1D1460_04740	COG1793	dna ligase
At1D1460_04780	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_04790	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_04800	COG1846	Transcriptional regulator
At1D1460_04810	COG1764	response to oxidative stress
At1D1460_04840	COG0488	(ABC) transporter
At1D1460_04910	COG4221	oxidoreductase activity
At1D1460_04940	COG0433	COG0433 Predicted ATPase
At1D1460_04960	COG1733	regulation of RNA biosynthetic process
At1D1460_04970	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
At1D1460_05000	COG0656	L-ascorbic acid biosynthetic process
At1D1460_05010	COG3781	membrane
At1D1460_05020	COG2378	regulation of single-species biofilm formation
At1D1460_05040	COG4106	trans-aconitate 2-methyltransferase activity
At1D1460_05050	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
At1D1460_05060	COG0840	transmembrane signaling receptor activity
At1D1460_05100	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
At1D1460_05140	COG3909	cytochrome
At1D1460_05150	COG2010	Cytochrome c
At1D1460_05210	COG0789	Transcriptional regulator
At1D1460_05260	COG0517	IMP dehydrogenase activity
At1D1460_05260	COG4175	Glycine betaine
At1D1460_05270	COG4176	ABC-type proline glycine betaine transport system permease component
At1D1460_05330	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
At1D1460_05330	COG2169	Transcriptional regulator
At1D1460_05350	COG2514	catechol 2,3-dioxygenase activity
At1D1460_05390	COG1272	protein, Hemolysin III
At1D1460_05410	COG1280	lysine exporter protein (LysE YggA)
At1D1460_05420	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
At1D1460_05440	COG2111	Na H antiporter
At1D1460_05450	COG1006	Multisubunit Na H antiporter MnhC subunit
At1D1460_05480	COG2212	antiporter activity
At1D1460_05490	COG1320	monovalent cation:proton antiporter activity
At1D1460_05500	COG4957	zinc ion binding
At1D1460_05530	COG2166	iron-sulfur cluster assembly
At1D1460_05550	COG2205	protein histidine kinase activity
At1D1460_05640	COG0583	DNA-binding transcription factor activity
At1D1460_05650	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
At1D1460_05660	COG2983	Belongs to the UPF0260 family
At1D1460_05680	COG3041	Addiction module toxin RelE StbE family
At1D1460_05690	COG3077	Addiction module antitoxin, RelB DinJ family
At1D1460_05700	COG2217	Heavy metal translocating P-type atpase
At1D1460_05760	COG2814	Major facilitator Superfamily
At1D1460_05780	COG1621	beta-fructofuranosidase activity
At1D1460_05790	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
At1D1460_05900	COG4695	Portal protein
At1D1460_06060	COG0745	RESPONSE REGULATOR receiver
At1D1460_06070	COG5002	protein histidine kinase activity
At1D1460_06090	COG4235	cytochrome complex assembly
At1D1460_06100	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
At1D1460_06110	COG1138	Cytochrome C-type biogenesis protein
At1D1460_06120	COG3088	subunit of a heme lyase
At1D1460_06130	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
At1D1460_06140	COG0745	RESPONSE REGULATOR receiver
At1D1460_06150	COG2205	protein histidine kinase activity
At1D1460_06160	COG3011	Protein conserved in bacteria
At1D1460_06170	COG3713	MltA-interacting MipA family protein
At1D1460_06180	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
At1D1460_06190	COG2202	Pas domain
At1D1460_06190	COG2205	protein histidine kinase activity
At1D1460_06210	COG0308	aminopeptidase N
At1D1460_06220	COG0697	spore germination
At1D1460_06250	COG0443	Heat shock 70 kDa protein
At1D1460_06270	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_06320	COG0604	alcohol dehydrogenase
At1D1460_06330	COG1733	regulation of RNA biosynthetic process
At1D1460_06340	COG1968	undecaprenyl-diphosphatase activity
At1D1460_06350	COG2239	Acts as a magnesium transporter
At1D1460_06360	COG2814	Major facilitator Superfamily
At1D1460_06400	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
At1D1460_06460	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
At1D1460_06550	COG0741	lytic transglycosylase activity
At1D1460_06560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_06570	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
At1D1460_06580	COG0840	transmembrane signaling receptor activity
At1D1460_06600	COG1758	RNA polymerase activity
At1D1460_06640	COG0736	holo-[acyl-carrier-protein] synthase activity
At1D1460_06650	COG0681	Belongs to the peptidase S26 family
At1D1460_06660	COG0571	ribonuclease III activity
At1D1460_06670	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
At1D1460_06690	COG0784	Response regulator, receiver
At1D1460_06700	COG1381	Involved in DNA repair and RecF pathway recombination
At1D1460_06720	COG2226	methyltransferase
At1D1460_06730	COG0633	Ferredoxin
At1D1460_06730	COG3217	Mosc domain protein beta barrel domain protein
At1D1460_06740	COG1418	mRNA catabolic process
At1D1460_06760	COG0346	lactoylglutathione lyase activity
At1D1460_06790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_06810	COG3443	Belongs to the bacterial solute-binding protein 9 family
At1D1460_06820	COG0668	transmembrane transport
At1D1460_06840	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
At1D1460_06900	COG1742	UPF0060 membrane protein
At1D1460_06920	COG0745	RESPONSE REGULATOR receiver
At1D1460_06920	COG3706	GGDEF domain
At1D1460_06940	COG1183	phosphatidylcholine synthase activity
At1D1460_06950	COG0688	phosphatidylethanolamine metabolic process
At1D1460_06960	COG5265	(ABC) transporter
At1D1460_07040	COG2852	Protein conserved in bacteria
At1D1460_07050	COG0215	cysteine-tRNA ligase activity
At1D1460_07060	COG4221	oxidoreductase activity
At1D1460_07070	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
At1D1460_07080	COG1286	toxin biosynthetic process
At1D1460_07120	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
At1D1460_07140	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
At1D1460_07160	COG0305	Participates in initiation and elongation during chromosome replication
At1D1460_07200	COG0359	binds to the 23S rRNA
At1D1460_07220	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
At1D1460_07230	COG0360	Binds together with S18 to 16S ribosomal RNA
At1D1460_07250	COG0667	Aldo Keto reductase
At1D1460_07260	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
At1D1460_07280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
At1D1460_07290	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
At1D1460_07310	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
At1D1460_07320	COG1561	YicC-like family, N-terminal region
At1D1460_07330	COG0194	GDP metabolic process
At1D1460_07370	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
At1D1460_07380	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
At1D1460_07400	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
At1D1460_07430	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
At1D1460_07470	COG5001	Diguanylate cyclase
At1D1460_07470	COG2203	Gaf domain
At1D1460_07470	COG3706	GGDEF domain
At1D1460_07470	COG4251	negative regulation of phosphorylation
At1D1460_07480	COG3300	MHYT domain
At1D1460_07480	COG5001	Diguanylate cyclase
At1D1460_07490	COG4191	Histidine kinase
At1D1460_07500	COG4566	intracellular signal transduction
At1D1460_07520	COG0488	(ABC) transporter
At1D1460_07530	COG3706	GGDEF domain
At1D1460_07550	COG0105	UTP biosynthetic process
At1D1460_07590	COG0314	molybdopterin synthase activity
At1D1460_07610	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
At1D1460_07620	COG0322	excinuclease ABC activity
At1D1460_07630	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_07680	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
At1D1460_07690	COG0243	molybdopterin cofactor binding
At1D1460_07740	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
At1D1460_07750	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
At1D1460_07770	COG0628	permease
At1D1460_07790	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
At1D1460_07800	COG0248	Ppx GppA phosphatase
At1D1460_07850	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
At1D1460_07870	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
At1D1460_07880	COG0477	Major facilitator Superfamily
At1D1460_07890	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
At1D1460_07910	COG0840	transmembrane signaling receptor activity
At1D1460_07920	COG0659	secondary active sulfate transmembrane transporter activity
At1D1460_07940	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
At1D1460_07950	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
At1D1460_07970	COG0113	porphobilinogen synthase activity
At1D1460_08010	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
At1D1460_08020	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
At1D1460_08030	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
At1D1460_08030	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
At1D1460_08050	COG1280	lysine exporter protein (LysE YggA)
At1D1460_08060	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
At1D1460_08070	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
At1D1460_08080	COG2814	Major facilitator Superfamily
At1D1460_08090	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
At1D1460_08130	COG0416	fatty acid biosynthetic process
At1D1460_08140	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
At1D1460_08150	COG0776	regulation of translation
At1D1460_08210	COG0601	transmembrane transport
At1D1460_08220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_08230	COG0444	Belongs to the ABC transporter superfamily
At1D1460_08250	COG0747	negative chemotaxis
At1D1460_08270	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
At1D1460_08280	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
At1D1460_08300	COG0745	RESPONSE REGULATOR receiver
At1D1460_08300	COG3706	GGDEF domain
At1D1460_08310	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
At1D1460_08320	COG0583	DNA-binding transcription factor activity
At1D1460_08330	COG0737	Belongs to the 5'-nucleotidase family
At1D1460_08370	COG2897	thiosulfate sulfurtransferase activity
At1D1460_08400	COG0415	Belongs to the DNA photolyase family
At1D1460_08420	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
At1D1460_08470	COG3932	Exopolysaccharide synthesis, ExoD
At1D1460_08490	COG1238	metal cluster binding
At1D1460_08630	COG1612	heme a metabolic process
At1D1460_08650	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
At1D1460_08660	COG0010	Belongs to the arginase family
At1D1460_08670	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
At1D1460_08680	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
At1D1460_08700	COG1832	CoA-binding protein
At1D1460_08750	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_08760	COG2124	cytochrome p450
At1D1460_08770	COG2199	diguanylate cyclase activity
At1D1460_08780	COG0740	serine-type endopeptidase activity
At1D1460_08790	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
At1D1460_08810	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
At1D1460_08830	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
At1D1460_08840	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
At1D1460_08850	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
At1D1460_08860	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
At1D1460_08880	COG0649	NAD binding
At1D1460_08900	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
At1D1460_08910	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
At1D1460_08930	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
At1D1460_08940	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
At1D1460_08960	COG0713	ATP synthesis coupled electron transport
At1D1460_08990	COG1007	ATP synthesis coupled electron transport
At1D1460_09000	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
At1D1460_09000	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
At1D1460_09030	COG0442	prolyl-tRNA aminoacylation
At1D1460_09050	COG1136	(ABC) transporter
At1D1460_09060	COG0587	DNA-directed DNA polymerase activity
At1D1460_09080	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
At1D1460_09120	COG0784	Response regulator, receiver
At1D1460_09130	COG0745	RESPONSE REGULATOR receiver
At1D1460_09130	COG3706	GGDEF domain
At1D1460_09140	COG0267	Belongs to the bacterial ribosomal protein bL33 family
At1D1460_09150	COG0477	Major facilitator Superfamily
At1D1460_09180	COG0557	exoribonuclease II activity
At1D1460_09190	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
At1D1460_09210	COG0758	DNA mediated transformation
At1D1460_09220	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
At1D1460_09240	COG0540	Belongs to the ATCase OTCase family
At1D1460_09270	COG1960	acyl-CoA dehydrogenase activity
At1D1460_09280	COG0456	acetyltransferase
At1D1460_09320	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
At1D1460_09330	COG2824	Alkylphosphonate utilization operon protein PhnA
At1D1460_09340	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
At1D1460_09350	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
At1D1460_09360	COG0154	amidase activity
At1D1460_09370	COG0456	acetyltransferase
At1D1460_09380	COG3811	Belongs to the UPF0386 family
At1D1460_09410	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
At1D1460_09430	COG0456	acetyltransferase
At1D1460_09470	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
At1D1460_09480	COG0439	Biotin carboxylase
At1D1460_09490	COG0511	ligase activity, forming carbon-carbon bonds
At1D1460_09500	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
At1D1460_09520	COG0436	Aminotransferase
At1D1460_09560	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_09570	COG1530	ribonuclease E activity
At1D1460_09590	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
At1D1460_09630	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
At1D1460_09640	COG0384	phenazine biosynthesis protein PhzF
At1D1460_09700	COG0633	Ferredoxin
At1D1460_09730	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
At1D1460_09740	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
At1D1460_09760	COG3768	UPF0283 membrane protein
At1D1460_09770	COG3106	COG3106 Predicted ATPase
At1D1460_09790	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
At1D1460_09830	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
At1D1460_09900	COG0537	adenosine 5'-monophosphoramidase activity
At1D1460_09950	COG0052	Belongs to the universal ribosomal protein uS2 family
At1D1460_09960	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
At1D1460_09970	COG0528	UMP kinase activity
At1D1460_09980	COG0233	cytoplasmic translational termination
At1D1460_09990	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
At1D1460_10000	COG0575	Belongs to the CDS family
At1D1460_10010	COG0750	zinc metalloprotease
At1D1460_10020	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
At1D1460_10030	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
At1D1460_10040	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
At1D1460_10050	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
At1D1460_10060	COG3494	Protein of unknown function (DUF1009)
At1D1460_10070	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
At1D1460_10080	COG2186	Transcriptional regulator
At1D1460_10100	COG0765	amino acid transport
At1D1460_10130	COG0372	Belongs to the citrate synthase family
At1D1460_10160	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
At1D1460_10180	COG2877	3-deoxy-8-phosphooctulonate synthase activity
At1D1460_10190	COG0148	phosphopyruvate hydratase activity
At1D1460_10210	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
At1D1460_10220	COG0022	dehydrogenase e1 component
At1D1460_10220	COG0508	dehydrogenase complex catalyzes the overall conversion of
At1D1460_10230	COG0508	dehydrogenase complex catalyzes the overall conversion of
At1D1460_10250	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
At1D1460_10270	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
At1D1460_10280	COG0697	spore germination
At1D1460_10320	COG2867	negative regulation of translational initiation
At1D1460_10330	COG1546	Belongs to the CinA family
At1D1460_10330	COG1058	Belongs to the CinA family
At1D1460_10340	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
At1D1460_10340	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
At1D1460_10360	COG3852	Histidine kinase
At1D1460_10370	COG2204	response regulator
At1D1460_10380	COG5000	phosphorelay sensor kinase activity
At1D1460_10390	COG2204	response regulator
At1D1460_10400	COG0569	domain protein
At1D1460_10410	COG1923	regulation of RNA biosynthetic process
At1D1460_10420	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
At1D1460_10430	COG3956	TIGRFAM MazG family protein
At1D1460_10450	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
At1D1460_10450	COG1648	precorrin-2 dehydrogenase activity
At1D1460_10530	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
At1D1460_10530	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
At1D1460_10540	COG0509	glycine decarboxylation via glycine cleavage system
At1D1460_10550	COG0404	The glycine cleavage system catalyzes the degradation of glycine
At1D1460_10600	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
At1D1460_10610	COG0564	pseudouridine synthase activity
At1D1460_10650	COG0251	oxidation-reduction process
At1D1460_10660	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
At1D1460_10680	COG1671	Belongs to the UPF0178 family
At1D1460_10710	COG0450	alkyl hydroperoxide reductase
At1D1460_10720	COG0625	glutathione transferase activity
At1D1460_10740	COG2801	Transposase and inactivated derivatives
At1D1460_10750	COG2826	transposase and inactivated derivatives, IS30 family
At1D1460_10760	COG0431	NADPH-dependent FMN reductase
At1D1460_10780	COG0798	PFAM Bile acid sodium symporter
At1D1460_10790	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
At1D1460_10820	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
At1D1460_10820	COG0321	lipoyl(octanoyl) transferase activity
At1D1460_10830	COG0084	hydrolase, TatD family'
At1D1460_10840	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
At1D1460_10860	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
At1D1460_10960	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
At1D1460_10970	COG2095	MarC family integral membrane protein
At1D1460_11000	COG0629	single-stranded DNA binding
At1D1460_11010	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
At1D1460_11030	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
At1D1460_11070	COG1108	ABC-type Mn2 Zn2 transport systems permease components
At1D1460_11080	COG1121	(ABC) transporter
At1D1460_11090	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
At1D1460_11120	COG0667	Aldo Keto reductase
At1D1460_11140	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
At1D1460_11300	COG2239	Acts as a magnesium transporter
At1D1460_11310	COG0243	molybdopterin cofactor binding
At1D1460_11330	COG0242	peptide deformylase activity
At1D1460_11360	COG2202	Pas domain
At1D1460_11360	COG2205	protein histidine kinase activity
At1D1460_11380	COG0321	lipoyl(octanoyl) transferase activity
At1D1460_11390	COG1064	alcohol dehydrogenase
At1D1460_11490	COG2124	cytochrome p450
At1D1460_11540	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
At1D1460_11550	COG0626	cystathionine gamma-synthase activity
At1D1460_11560	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_11570	COG4597	amino acid ABC transporter
At1D1460_11580	COG0765	amino acid transport
At1D1460_11590	COG1126	abc transporter atp-binding protein
At1D1460_11610	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
At1D1460_11640	COG0436	Aminotransferase
At1D1460_11700	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
At1D1460_11720	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
At1D1460_11730	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
At1D1460_11740	COG0635	Involved in the biosynthesis of porphyrin-containing compound
At1D1460_11770	COG3243	poly(R)-hydroxyalkanoic acid synthase
At1D1460_11780	COG1489	DNA binding
At1D1460_11790	COG0024	Methionine aminopeptidase
At1D1460_11800	COG2003	Belongs to the UPF0758 family
At1D1460_11810	COG2003	Belongs to the UPF0758 family
At1D1460_11840	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
At1D1460_11880	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
At1D1460_11890	COG0546	phosphoglycolate phosphatase activity
At1D1460_11910	COG0114	fumarate hydratase activity
At1D1460_11930	COG0504	CTP synthase activity
At1D1460_11950	COG0149	triose-phosphate isomerase activity
At1D1460_11970	COG0187	DNA topoisomerase II activity
At1D1460_11990	COG0740	serine-type endopeptidase activity
At1D1460_12010	COG0640	Transcriptional regulator
At1D1460_12020	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
At1D1460_12080	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
At1D1460_12080	COG3264	Mechanosensitive ion channel
At1D1460_12210	COG1127	ABC transporter
At1D1460_12220	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
At1D1460_12230	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_12260	COG0281	malic enzyme
At1D1460_12260	COG0280	phosphate acetyltransferase
At1D1460_12280	COG0778	Nitroreductase
At1D1460_12290	COG0823	Involved in the tonB-independent uptake of proteins
At1D1460_12320	COG1368	sulfuric ester hydrolase activity
At1D1460_12370	COG0544	peptidyl-prolyl cis-trans isomerase activity
At1D1460_12400	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
At1D1460_12440	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
At1D1460_12470	COG0318	PFAM AMP-dependent synthetase and ligase
At1D1460_12490	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
At1D1460_12490	COG0512	Glutamine amidotransferase of anthranilate synthase
At1D1460_12500	COG0343	queuine tRNA-ribosyltransferase activity
At1D1460_12510	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
At1D1460_12520	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
At1D1460_12530	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
At1D1460_12540	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
At1D1460_12580	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
At1D1460_12590	COG0134	indole-3-glycerol-phosphate synthase activity
At1D1460_12600	COG0315	cyclic pyranopterin monophosphate synthase activity
At1D1460_12610	COG0303	'Molybdopterin
At1D1460_12620	COG3706	GGDEF domain
At1D1460_12640	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
At1D1460_12640	COG0475	glutathione-regulated potassium exporter activity
At1D1460_12660	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
At1D1460_12680	COG2814	Major facilitator Superfamily
At1D1460_12690	COG0746	molybdenum cofactor guanylyltransferase activity
At1D1460_12700	COG1763	Mo-molybdopterin cofactor biosynthetic process
At1D1460_12710	COG0739	heme binding
At1D1460_12720	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
At1D1460_12730	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
At1D1460_12740	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
At1D1460_12750	COG0805	protein transport
At1D1460_12760	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
At1D1460_12770	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
At1D1460_12780	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
At1D1460_12790	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
At1D1460_12800	COG1472	Belongs to the glycosyl hydrolase 3 family
At1D1460_12820	COG0018	arginyl-trna synthetase
At1D1460_12830	COG0232	Belongs to the dGTPase family. Type 2 subfamily
At1D1460_12880	COG0525	valine-tRNA ligase activity
At1D1460_12900	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
At1D1460_12990	COG0655	NAD(P)H dehydrogenase (quinone) activity
At1D1460_13000	COG1058	Belongs to the CinA family
At1D1460_13000	COG1546	Belongs to the CinA family
At1D1460_13010	COG0589	response to stress
At1D1460_13020	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
At1D1460_13040	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
At1D1460_13060	COG0640	Transcriptional regulator
At1D1460_13070	COG1914	H( )-stimulated, divalent metal cation uptake system
At1D1460_13090	COG1132	(ABC) transporter
At1D1460_13100	COG0628	permease
At1D1460_13170	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
At1D1460_13190	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
At1D1460_13210	COG0302	gtp cyclohydrolase
At1D1460_13220	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
At1D1460_13230	COG1752	Esterase of the alpha-beta hydrolase superfamily
At1D1460_13250	COG0517	IMP dehydrogenase activity
At1D1460_13250	COG0516	GMP reductase activity
At1D1460_13310	COG1760	l-serine dehydratase
At1D1460_13380	COG0583	DNA-binding transcription factor activity
At1D1460_13410	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
At1D1460_13410	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
At1D1460_13420	COG0347	Belongs to the P(II) protein family
At1D1460_13430	COG0174	glutamine synthetase
At1D1460_13490	COG0697	spore germination
At1D1460_13510	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
At1D1460_13530	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
At1D1460_13590	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
At1D1460_13600	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
At1D1460_13610	COG2186	Transcriptional regulator
At1D1460_13650	COG1129	ABC transporter
At1D1460_13660	COG1183	phosphatidylcholine synthase activity
At1D1460_13670	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
At1D1460_13680	COG0679	Auxin Efflux Carrier
At1D1460_13690	COG0785	Cytochrome C biogenesis protein
At1D1460_13720	COG1278	Cold shock
At1D1460_13830	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
At1D1460_13870	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
At1D1460_14100	COG3685	Protein conserved in bacteria
At1D1460_14130	COG0393	Putative heavy-metal-binding
At1D1460_14240	COG0616	signal peptide processing
At1D1460_14340	COG2815	serine threonine protein kinase
At1D1460_14340	COG0515	serine threonine protein kinase
At1D1460_14360	COG3237	CsbD-like
At1D1460_14380	COG0270	DNA (cytosine-5-)-methyltransferase activity
At1D1460_14450	COG1061	Type III restriction enzyme res subunit
At1D1460_14500	COG0592	DNA-directed DNA polymerase activity
At1D1460_14690	COG0582	viral genome integration into host DNA
At1D1460_14730	COG0577	efflux transmembrane transporter activity
At1D1460_14730	COG1136	(ABC) transporter
At1D1460_14740	COG0577	efflux transmembrane transporter activity
At1D1460_14740	COG1136	(ABC) transporter
At1D1460_14800	COG2151	metal-sulfur cluster biosynthetic enzyme
At1D1460_14810	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
At1D1460_14820	COG0719	Fe-S assembly protein
At1D1460_14830	COG0396	ATPase activity
At1D1460_14840	COG0719	Fe-S assembly protein
At1D1460_14850	COG1104	cysteine desulfurase activity
At1D1460_14860	COG2945	thiolester hydrolase activity
At1D1460_14870	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
At1D1460_14880	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
At1D1460_14900	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
At1D1460_14910	COG2833	Protein of unknown function (DUF455)
At1D1460_14920	COG0739	heme binding
At1D1460_14930	COG0513	Belongs to the DEAD box helicase family
At1D1460_14980	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
At1D1460_15000	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
At1D1460_15010	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
At1D1460_15020	COG0047	phosphoribosylformylglycinamidine synthase activity
At1D1460_15050	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
At1D1460_15060	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
At1D1460_15110	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
At1D1460_15120	COG2814	Major facilitator Superfamily
At1D1460_15130	COG0483	inositol monophosphate 1-phosphatase activity
At1D1460_15140	COG0483	inositol monophosphate 1-phosphatase activity
At1D1460_15150	COG0037	tRNA processing
At1D1460_15160	COG2066	Belongs to the glutaminase family
At1D1460_15170	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
At1D1460_15180	COG0861	Integral membrane protein TerC family
At1D1460_15210	COG1280	lysine exporter protein (LysE YggA)
At1D1460_15240	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
At1D1460_15250	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
At1D1460_15270	COG0538	isocitrate dehydrogenase activity
At1D1460_15290	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
At1D1460_15300	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
At1D1460_15310	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_15320	COG2313	pseudouridylate synthase activity
At1D1460_15340	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_15350	COG4215	(ABC) transporter
At1D1460_15370	COG5425	PFAM Usg family protein
At1D1460_15390	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_15400	COG1522	sequence-specific DNA binding
At1D1460_15410	COG1573	uracil-dna glycosylase
At1D1460_15430	COG2202	Pas domain
At1D1460_15430	COG2205	protein histidine kinase activity
At1D1460_15440	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
At1D1460_15450	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
At1D1460_15460	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
At1D1460_15490	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
At1D1460_15500	COG0842	Transport permease protein
At1D1460_15510	COG1131	(ABC) transporter
At1D1460_15540	COG0840	transmembrane signaling receptor activity
At1D1460_15560	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
At1D1460_15570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
At1D1460_15610	COG0129	dihydroxy-acid dehydratase activity
At1D1460_15620	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
At1D1460_15630	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
At1D1460_15650	COG3739	integral membrane protein
At1D1460_15670	COG0203	ribosomal protein L17
At1D1460_15680	COG0202	RNA polymerase activity
At1D1460_15690	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
At1D1460_15700	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
At1D1460_15710	COG0563	adenylate kinase activity
At1D1460_15720	COG0201	protein transport
At1D1460_15730	COG0200	Binds to the 23S rRNA
At1D1460_15740	COG1841	ribosomal large subunit assembly
At1D1460_15750	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
At1D1460_15760	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
At1D1460_15770	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
At1D1460_15780	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
At1D1460_15790	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
At1D1460_15800	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
At1D1460_15810	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
At1D1460_15820	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
At1D1460_15830	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
At1D1460_15840	COG0255	Belongs to the universal ribosomal protein uL29 family
At1D1460_15850	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
At1D1460_15860	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
At1D1460_15870	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
At1D1460_15880	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
At1D1460_15890	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
At1D1460_15900	COG0089	rRNA binding
At1D1460_15910	COG0088	Forms part of the polypeptide exit tunnel
At1D1460_15920	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
At1D1460_15930	COG0051	transcription antitermination factor activity, RNA binding
At1D1460_15940	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
At1D1460_15950	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
At1D1460_15960	COG0049	tRNA binding
At1D1460_15970	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
At1D1460_16010	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
At1D1460_16020	COG0085	RNA polymerase activity
At1D1460_16030	COG0222	ribosome binding
At1D1460_16040	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
At1D1460_16050	COG0081	regulation of translation
At1D1460_16060	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
At1D1460_16090	COG1086	Polysaccharide biosynthesis protein
At1D1460_16100	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
At1D1460_16110	COG0861	Integral membrane protein TerC family
At1D1460_16160	COG1132	(ABC) transporter
At1D1460_16170	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
At1D1460_16210	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
At1D1460_16280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_16280	COG2205	protein histidine kinase activity
At1D1460_16280	COG2198	Histidine kinase
At1D1460_16280	COG0784	Response regulator, receiver
At1D1460_16290	COG0784	Response regulator, receiver
At1D1460_16300	COG2202	Pas domain
At1D1460_16300	COG3920	Histidine kinase
At1D1460_16310	COG0784	Response regulator, receiver
At1D1460_16320	COG4251	negative regulation of phosphorylation
At1D1460_16330	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
At1D1460_16340	COG1607	acyl-coa hydrolase
At1D1460_16380	COG2910	NAD(P)H-binding
At1D1460_16390	COG1733	regulation of RNA biosynthetic process
At1D1460_16420	COG0556	nucleotide-excision repair
At1D1460_16440	COG2382	esterase
At1D1460_16480	COG0484	heat shock protein binding
At1D1460_16520	COG3706	GGDEF domain
At1D1460_16560	COG1840	ABC-type Fe3 transport system, periplasmic component
At1D1460_16570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
At1D1460_16600	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
At1D1460_16620	COG2207	Transcriptional regulator
At1D1460_16630	COG1064	alcohol dehydrogenase
At1D1460_16640	COG1252	NADH dehydrogenase
At1D1460_16650	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
At1D1460_16660	COG2197	response regulator
At1D1460_16670	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
At1D1460_16740	COG0656	L-ascorbic acid biosynthetic process
At1D1460_16770	COG0440	acetolactate synthase activity
At1D1460_16780	COG0028	Belongs to the TPP enzyme family
At1D1460_16800	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
At1D1460_16810	COG3830	Belongs to the UPF0237 family
At1D1460_16810	COG0560	Phosphoserine phosphatase
At1D1460_16850	COG0330	HflC and HflK could
At1D1460_16860	COG0330	HflC and HflK could
At1D1460_16880	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
At1D1460_16940	COG0277	FAD linked oxidase domain protein
At1D1460_16950	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
At1D1460_17030	COG1335	isochorismatase
At1D1460_17090	COG2264	protein methyltransferase activity
At1D1460_17100	COG1999	signal sequence binding
At1D1460_17120	COG0835	chemotaxis
At1D1460_17140	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
At1D1460_17150	COG0583	DNA-binding transcription factor activity
At1D1460_17170	COG1247	-acetyltransferase
At1D1460_17190	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
At1D1460_17200	COG0497	DNA recombination
At1D1460_17210	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
At1D1460_17230	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
At1D1460_17240	COG0849	cell division
At1D1460_17250	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
At1D1460_17260	COG1181	Belongs to the D-alanine--D-alanine ligase family
At1D1460_17270	COG0477	Major facilitator Superfamily
At1D1460_17290	COG0812	UDP-N-acetylmuramate dehydrogenase activity
At1D1460_17300	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
At1D1460_17310	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
At1D1460_17330	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
At1D1460_17340	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
At1D1460_17360	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
At1D1460_17390	COG0275	rRNA processing
At1D1460_17400	COG2001	Belongs to the MraZ family
At1D1460_17440	COG3023	N-Acetylmuramoyl-L-alanine amidase
At1D1460_17450	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
At1D1460_17500	COG4106	trans-aconitate 2-methyltransferase activity
At1D1460_17560	COG2267	carboxylic ester hydrolase activity
At1D1460_17570	COG1804	L-carnitine dehydratase bile acid-inducible protein F
At1D1460_17630	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_17640	COG2814	Major facilitator Superfamily
At1D1460_17710	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_17720	COG0174	glutamine synthetase
At1D1460_17730	COG0531	amino acid
At1D1460_17760	COG2182	Extracellular solute-binding protein
At1D1460_17790	COG3842	ATPase activity
At1D1460_17900	COG2968	Membrane
At1D1460_17920	COG0432	Pfam Uncharacterised protein family UPF0047
At1D1460_17950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
At1D1460_17960	COG0358	DNA primase activity
At1D1460_18000	COG0505	Belongs to the CarA family
At1D1460_18010	COG0534	Mate efflux family protein
At1D1460_18040	COG2321	neutral zinc metallopeptidase
At1D1460_18070	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
At1D1460_18090	COG3706	GGDEF domain
At1D1460_18120	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
At1D1460_18140	COG1522	sequence-specific DNA binding
At1D1460_18150	COG0492	ferredoxin-NADP+ reductase activity
At1D1460_18160	COG0583	DNA-binding transcription factor activity
At1D1460_18180	COG1902	pentaerythritol trinitrate reductase activity
At1D1460_18230	COG0387	Pfam Sodium calcium exchanger
At1D1460_18250	COG2199	diguanylate cyclase activity
At1D1460_18250	COG2200	EAL domain
At1D1460_18280	COG1278	Cold shock
At1D1460_18290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
At1D1460_18310	COG1846	Transcriptional regulator
At1D1460_18320	COG0745	RESPONSE REGULATOR receiver
At1D1460_18330	COG2205	protein histidine kinase activity
At1D1460_18340	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
At1D1460_18380	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
At1D1460_18430	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
At1D1460_18450	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
At1D1460_18480	COG0840	transmembrane signaling receptor activity
At1D1460_18490	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_18510	COG3300	MHYT domain
At1D1460_18510	COG5001	Diguanylate cyclase
At1D1460_18520	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
At1D1460_18530	COG5001	Diguanylate cyclase
At1D1460_18550	COG0193	aminoacyl-tRNA hydrolase activity
At1D1460_18570	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
At1D1460_18620	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
At1D1460_18640	COG2857	Cytochrome c1
At1D1460_18640	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
At1D1460_18680	COG1132	(ABC) transporter
At1D1460_18690	COG1132	(ABC) transporter
At1D1460_18710	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
At1D1460_18740	COG0408	coproporphyrinogen oxidase activity
At1D1460_18770	COG0617	tRNA 3'-terminal CCA addition
At1D1460_18800	COG0714	Associated with various cellular activities
At1D1460_18840	COG0454	-acetyltransferase
At1D1460_18870	COG0477	Major facilitator Superfamily
At1D1460_18890	COG0435	Glutathione S-transferase
At1D1460_18900	COG0494	nUDIX hydrolase
At1D1460_18930	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
At1D1460_18940	COG3135	benzoate transporter
At1D1460_18990	COG0740	serine-type endopeptidase activity
At1D1460_19020	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
At1D1460_19030	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
At1D1460_19080	COG4175	Glycine betaine
At1D1460_19110	COG1435	thymidine kinase activity
At1D1460_19160	COG4771	TonB-dependent receptor
At1D1460_19160	COG1629	transport
At1D1460_19180	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
At1D1460_19180	COG0512	Glutamine amidotransferase of anthranilate synthase
At1D1460_19210	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
At1D1460_19230	COG0366	Alpha amylase catalytic
At1D1460_19240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_19280	COG1160	GTP binding
At1D1460_19320	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
At1D1460_19340	COG0024	Methionine aminopeptidase
At1D1460_19360	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_19380	COG1529	Aldehyde oxidase and xanthine dehydrogenase
At1D1460_19410	COG0583	DNA-binding transcription factor activity
At1D1460_19440	COG0402	S-adenosylhomocysteine deaminase activity
At1D1460_19480	COG1309	transcriptional regulator
At1D1460_19490	COG1686	Belongs to the peptidase S11 family
At1D1460_19510	COG2351	hydroxyisourate hydrolase activity
At1D1460_19520	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
At1D1460_19570	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
At1D1460_19590	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_19590	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
At1D1460_19610	COG0513	Belongs to the DEAD box helicase family
At1D1460_19640	COG2259	Doxx family
At1D1460_19650	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_19670	COG2308	Evidence 4 Homologs of previously reported genes of
At1D1460_19690	COG1305	Transglutaminase-like
At1D1460_19750	COG4214	carbohydrate transport
At1D1460_19760	COG1129	ABC transporter
At1D1460_19770	COG4213	ABC transporter substrate-binding protein
At1D1460_19990	COG0840	transmembrane signaling receptor activity
At1D1460_20000	COG2972	Histidine kinase
At1D1460_20000	COG0840	transmembrane signaling receptor activity
At1D1460_20030	COG1410	methionine synthase
At1D1460_20030	COG0646	methionine synthase
At1D1460_20050	COG4215	(ABC) transporter
At1D1460_20120	COG1215	transferase activity, transferring glycosyl groups
At1D1460_20180	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
At1D1460_20240	COG1309	transcriptional regulator
At1D1460_20270	COG0494	nUDIX hydrolase
At1D1460_20290	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_20300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_20360	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
At1D1460_20370	COG0830	nickel cation binding
At1D1460_20380	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
At1D1460_20410	COG0804	urea catabolic process
At1D1460_20420	COG1442	glycosyl transferase family 8
At1D1460_20440	COG0832	Belongs to the urease beta subunit family
At1D1460_20450	COG3813	Protein conserved in bacteria
At1D1460_20460	COG0831	urea catabolic process
At1D1460_20470	COG0829	nickel cation binding
At1D1460_20530	COG0559	Belongs to the binding-protein-dependent transport system permease family
At1D1460_20560	COG0174	glutamine synthetase
At1D1460_20570	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_20580	COG5002	protein histidine kinase activity
At1D1460_20580	COG0784	Response regulator, receiver
At1D1460_20580	COG2198	Histidine kinase
At1D1460_20610	COG0726	polysaccharide deacetylase
At1D1460_20650	COG0411	ABC transporter
At1D1460_20680	COG1218	3'(2'),5'-bisphosphate nucleotidase
At1D1460_20830	COG0564	pseudouridine synthase activity
At1D1460_20850	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
At1D1460_20870	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
At1D1460_20920	COG0346	lactoylglutathione lyase activity
At1D1460_20940	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
At1D1460_20960	COG2832	Protein of unknown function (DUF454)
At1D1460_20970	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
At1D1460_20980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_20990	COG4558	Periplasmic binding protein
At1D1460_21010	COG3721	Heme iron utilization protein
At1D1460_21040	COG3655	Transcriptional regulator
At1D1460_21070	COG3657	addiction module killer protein
At1D1460_21090	COG2205	protein histidine kinase activity
At1D1460_21180	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_21190	COG4605	iron ion homeostasis
At1D1460_21200	COG4604	ABC transporter, ATP-binding protein
At1D1460_21210	COG0783	Belongs to the Dps family
At1D1460_21230	COG2972	Histidine kinase
At1D1460_21230	COG0840	transmembrane signaling receptor activity
At1D1460_21240	COG0656	L-ascorbic acid biosynthetic process
At1D1460_21250	COG2814	Major facilitator Superfamily
At1D1460_21270	COG0583	DNA-binding transcription factor activity
At1D1460_21290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_21380	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
At1D1460_21410	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
At1D1460_21420	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
At1D1460_21430	COG0288	reversible hydration of carbon dioxide
At1D1460_21450	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
At1D1460_21480	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
At1D1460_21490	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
At1D1460_21500	COG0778	Nitroreductase
At1D1460_21510	COG2267	carboxylic ester hydrolase activity
At1D1460_21520	COG0251	oxidation-reduction process
At1D1460_21530	COG1335	isochorismatase
At1D1460_21540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_21560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_21590	COG1175	transmembrane transport
At1D1460_21600	COG0395	ABC-type sugar transport system, permease component
At1D1460_21610	COG3842	ATPase activity
At1D1460_21620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_21640	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
At1D1460_21670	COG4608	Belongs to the ABC transporter superfamily
At1D1460_21680	COG0444	Belongs to the ABC transporter superfamily
At1D1460_21700	COG0601	transmembrane transport
At1D1460_21820	COG2159	amidohydrolase
At1D1460_21830	COG1960	acyl-CoA dehydrogenase activity
At1D1460_21890	COG0745	RESPONSE REGULATOR receiver
At1D1460_21910	COG0446	pyridine nucleotide-disulphide oxidoreductase
At1D1460_21910	COG1902	pentaerythritol trinitrate reductase activity
At1D1460_21920	COG3842	ATPase activity
At1D1460_21940	COG1840	ABC-type Fe3 transport system, periplasmic component
At1D1460_21950	COG1840	ABC-type Fe3 transport system, periplasmic component
At1D1460_21960	COG0745	RESPONSE REGULATOR receiver
At1D1460_21980	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
At1D1460_21990	COG0583	DNA-binding transcription factor activity
At1D1460_22000	COG1278	Cold shock
At1D1460_22010	COG4372	Transposase
At1D1460_22020	COG3436	PFAM IS66 Orf2 family protein
At1D1460_22040	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
At1D1460_22050	COG1309	transcriptional regulator
At1D1460_22060	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_22070	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
At1D1460_22090	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
At1D1460_22100	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
At1D1460_22140	COG0583	DNA-binding transcription factor activity
At1D1460_22150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_22160	COG0725	ABC transporter, periplasmic molybdate-binding protein
At1D1460_22170	COG4149	molybdate abc transporter
At1D1460_22180	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
At1D1460_22210	COG2022	thiamine diphosphate biosynthetic process
At1D1460_22240	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
At1D1460_22260	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
At1D1460_22280	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
At1D1460_22320	COG1132	(ABC) transporter
At1D1460_22330	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
At1D1460_22420	COG4166	transmembrane transport
At1D1460_22430	COG0601	transmembrane transport
At1D1460_22440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_22470	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
At1D1460_22480	COG3142	Participates in the control of copper homeostasis
At1D1460_22490	COG2814	Major facilitator Superfamily
At1D1460_22520	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_22530	COG1737	Transcriptional regulator
At1D1460_22550	COG3842	ATPase activity
At1D1460_22570	COG0395	ABC-type sugar transport system, permease component
At1D1460_22620	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
At1D1460_22630	COG1940	carbohydrate kinase activity
At1D1460_22650	COG0671	phosphoesterase, PA-phosphatase related
At1D1460_22660	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
At1D1460_22670	COG0156	8-amino-7-oxononanoate synthase activity
At1D1460_22690	COG0729	surface antigen
At1D1460_22710	COG0835	chemotaxis
At1D1460_22730	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
At1D1460_22740	COG0355	proton-transporting ATP synthase activity, rotational mechanism
At1D1460_22750	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
At1D1460_22760	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
At1D1460_22770	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
At1D1460_22780	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
At1D1460_22810	COG4974	Belongs to the 'phage' integrase family
At1D1460_22860	COG1280	lysine exporter protein (LysE YggA)
At1D1460_22880	COG0508	dehydrogenase complex catalyzes the overall conversion of
At1D1460_22890	COG0567	Dehydrogenase, E1 component
At1D1460_22900	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
At1D1460_22910	COG0045	succinate-CoA ligase (ADP-forming) activity
At1D1460_22920	COG0039	L-malate dehydrogenase activity
At1D1460_22930	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
At1D1460_23000	COG2264	protein methyltransferase activity
At1D1460_23030	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
At1D1460_23040	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
At1D1460_23050	COG0181	hydroxymethylbilane synthase activity
At1D1460_23140	COG1872	DUF167
At1D1460_23150	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
At1D1460_23180	COG0339	signal peptide processing
At1D1460_23190	COG1846	Transcriptional regulator
At1D1460_23210	COG0137	argininosuccinate synthase activity
At1D1460_23230	COG1280	lysine exporter protein (LysE YggA)
At1D1460_23250	COG4120	Belongs to the binding-protein-dependent transport system permease family
At1D1460_23270	COG0820	rRNA (adenine-C2-)-methyltransferase activity
At1D1460_23300	COG2154	pterin-4-alpha-carbinolamine dehydratase
At1D1460_23310	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
At1D1460_23320	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
At1D1460_23340	COG4181	ATPase activity
At1D1460_23360	COG0670	Belongs to the BI1 family
At1D1460_23390	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
At1D1460_23400	COG4133	protoheme IX ABC transporter activity
At1D1460_23420	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
At1D1460_23430	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
At1D1460_23460	COG3706	GGDEF domain
At1D1460_23480	COG2917	probably involved in intracellular septation
At1D1460_23490	COG0552	protein localization to endoplasmic reticulum
At1D1460_23500	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
At1D1460_23510	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
At1D1460_23530	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
At1D1460_23540	COG0287	Prephenate dehydrogenase
At1D1460_23540	COG1605	Chorismate mutase
At1D1460_23550	COG0228	four-way junction DNA binding
At1D1460_23560	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
At1D1460_23570	COG0336	Belongs to the RNA methyltransferase TrmD family
At1D1460_23590	COG0335	large ribosomal subunit rRNA binding
At1D1460_23600	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
At1D1460_23610	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_23640	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
At1D1460_23670	COG4783	chaperone-mediated protein folding
At1D1460_23680	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
At1D1460_23740	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
At1D1460_23760	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
At1D1460_23770	COG0142	geranyltranstransferase activity
At1D1460_23780	COG2885	chlorophyll binding
At1D1460_23790	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
At1D1460_23800	COG2223	nitrite transmembrane transporter activity
At1D1460_23810	COG1349	DNA-binding transcription factor activity
At1D1460_23820	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
At1D1460_23830	COG2197	response regulator
At1D1460_23840	COG1132	(ABC) transporter
At1D1460_23860	COG3459	Glycosyltransferase 36 associated
At1D1460_23870	COG1473	amidohydrolase
At1D1460_23890	COG0579	oxidoreductase
At1D1460_23910	COG0129	dihydroxy-acid dehydratase activity
At1D1460_23920	COG2084	Dehydrogenase
At1D1460_23930	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
At1D1460_23940	COG0277	FAD linked oxidase domain protein
At1D1460_23950	COG2186	Transcriptional regulator
At1D1460_23970	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
At1D1460_23980	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
At1D1460_23990	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
At1D1460_24000	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
At1D1460_24020	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
At1D1460_24030	COG0495	leucyl-tRNA aminoacylation
At1D1460_24070	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
At1D1460_24090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
At1D1460_24100	COG1946	Acyl-CoA thioesterase
At1D1460_24110	COG0347	Belongs to the P(II) protein family
At1D1460_24120	COG0004	ammonium transporteR
At1D1460_24130	COG1674	ftsk spoiiie
At1D1460_24140	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
At1D1460_24170	COG0745	RESPONSE REGULATOR receiver
At1D1460_24190	COG1329	Transcriptional regulator
At1D1460_24210	COG2270	Major facilitator Superfamily
At1D1460_24240	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_24270	COG0494	nUDIX hydrolase
At1D1460_24280	COG2861	carbohydrate metabolic process
At1D1460_24290	COG0793	Belongs to the peptidase S41A family
At1D1460_24310	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
At1D1460_24320	COG0799	negative regulation of ribosome biogenesis
At1D1460_24330	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
At1D1460_24340	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
At1D1460_24350	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
At1D1460_24360	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
At1D1460_24390	COG0211	Belongs to the bacterial ribosomal protein bL27 family
At1D1460_24400	COG0261	This protein binds to 23S rRNA in the presence of protein L20
At1D1460_24450	COG0066	3-isopropylmalate dehydratase activity
At1D1460_24460	COG0473	3-isopropylmalate dehydrogenase activity
At1D1460_24470	COG1858	cytochrome C peroxidase
At1D1460_24480	COG1797	cobyrinic acid a,c-diamide synthase activity
At1D1460_24500	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
At1D1460_24630	COG1492	cobalamin metabolic process
At1D1460_24660	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_24670	COG3254	rhamnose metabolic process
At1D1460_24680	COG0246	Mannitol dehydrogenase
At1D1460_24690	COG1063	alcohol dehydrogenase
At1D1460_24740	COG1129	ABC transporter
At1D1460_24750	COG2186	Transcriptional regulator
At1D1460_24760	COG2721	sulfolactate sulfo-lyase activity
At1D1460_24770	COG0138	bifunctional purine biosynthesis protein purh
At1D1460_24790	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
At1D1460_24790	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
At1D1460_24800	COG0501	Belongs to the peptidase M48B family
At1D1460_24820	COG1475	DNA binding
At1D1460_24830	COG1192	Involved in chromosome partitioning
At1D1460_24840	COG0357	Ribosomal RNA small subunit methyltransferase G
At1D1460_24850	COG0445	tRNA wobble uridine modification
At1D1460_24860	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
At1D1460_24870	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
At1D1460_24890	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
At1D1460_24900	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
At1D1460_24910	COG0424	maF-like protein
At1D1460_24920	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
At1D1460_24930	COG0237	dephospho-CoA kinase activity
At1D1460_24940	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
At1D1460_24950	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
At1D1460_24960	COG3030	protein affecting phage T7 exclusion by the F plasmid
At1D1460_24980	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
At1D1460_25010	COG0187	DNA topoisomerase II activity
At1D1460_25030	COG0179	Fumarylacetoacetate (FAA) hydrolase
At1D1460_25060	COG0135	phosphoribosylanthranilate isomerase activity
At1D1460_25070	COG0133	tryptophan synthase activity
At1D1460_25080	COG0159	tryptophan synthase activity
At1D1460_25090	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
At1D1460_25120	COG1074	ATP-dependent DNA helicase activity
At1D1460_25140	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
At1D1460_25150	COG0802	atpase or kinase
At1D1460_25160	COG2205	protein histidine kinase activity
At1D1460_25170	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
At1D1460_25180	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
At1D1460_25190	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
At1D1460_25190	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
At1D1460_25200	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
At1D1460_25210	COG0642	Histidine kinase
At1D1460_25220	COG0745	RESPONSE REGULATOR receiver
At1D1460_25230	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
At1D1460_25250	COG1652	LysM domain
At1D1460_25260	COG1072	(Pantothenic acid kinase))
At1D1460_25270	COG0140	phosphoribosyl-ATP diphosphatase activity
At1D1460_25280	COG0107	imidazoleglycerol-phosphate synthase activity
At1D1460_25290	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
At1D1460_25300	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
At1D1460_25320	COG0131	Imidazoleglycerol-phosphate dehydratase
At1D1460_25330	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
At1D1460_25340	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
At1D1460_25360	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
At1D1460_25390	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
At1D1460_25410	COG1643	Atp-dependent helicase
At1D1460_25430	COG1940	carbohydrate kinase activity
At1D1460_25470	COG1072	(Pantothenic acid kinase))
At1D1460_25490	COG1780	Probably involved in ribonucleotide reductase function
At1D1460_25530	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
At1D1460_25590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_25610	COG2813	Specifically methylates the guanine in position
At1D1460_25620	COG1185	polyribonucleotide nucleotidyltransferase activity
At1D1460_25630	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
At1D1460_25640	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
At1D1460_25650	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
At1D1460_25660	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
At1D1460_25660	COG3064	Membrane
At1D1460_25690	COG0779	Required for maturation of 30S ribosomal subunits
At1D1460_25700	COG2814	Major facilitator Superfamily
At1D1460_25710	COG2951	lytic endotransglycosylase activity
At1D1460_25720	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
At1D1460_25740	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
At1D1460_25750	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
At1D1460_25770	COG2816	NAD+ diphosphatase activity
At1D1460_25780	COG1605	Chorismate mutase
At1D1460_25780	COG0077	Prephenate dehydratase
At1D1460_25790	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
At1D1460_25800	COG3474	cytochrome
At1D1460_25820	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
At1D1460_25830	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
At1D1460_25840	COG1278	Cold shock
At1D1460_25850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
At1D1460_25870	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
At1D1460_25870	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
At1D1460_25880	COG0333	Belongs to the bacterial ribosomal protein bL32 family
At1D1460_25940	COG2900	Belongs to the SlyX family
At1D1460_25960	COG0484	heat shock protein binding
At1D1460_25970	COG0443	Heat shock 70 kDa protein
At1D1460_25990	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
At1D1460_26040	COG0295	cytidine deaminase activity
At1D1460_26050	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
At1D1460_26060	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
At1D1460_26070	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
At1D1460_26090	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
At1D1460_26100	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
At1D1460_26110	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
At1D1460_26130	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
At1D1460_26140	COG1845	cytochrome c oxidase, subunit III
At1D1460_26150	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
At1D1460_26160	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
At1D1460_26170	COG0477	Major facilitator Superfamily
At1D1460_26180	COG0070	glutamate synthase
At1D1460_26180	COG0069	glutamate synthase activity
At1D1460_26180	COG0067	glutamate synthase
At1D1460_26190	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
At1D1460_26220	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
At1D1460_26240	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
At1D1460_26300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_26340	COG0848	biopolymer transport protein
At1D1460_26360	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
At1D1460_26390	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
At1D1460_26400	COG3454	Phosphonate metabolism
At1D1460_26410	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
At1D1460_26430	COG3639	organic phosphonate transmembrane transporter activity
At1D1460_26440	COG3639	organic phosphonate transmembrane transporter activity
At1D1460_26450	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
At1D1460_26460	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
At1D1460_26480	COG4778	phosphonate C-P lyase system protein PhnL
At1D1460_26490	COG4107	phosphonate C-P lyase system protein PhnK
At1D1460_26500	COG3627	carbon phosphorus lyase activity
At1D1460_26520	COG3626	phosphonate metabolism
At1D1460_26530	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
At1D1460_26540	COG3624	Phosphonate C-P lyase system protein PhnG
At1D1460_26550	COG2188	Transcriptional regulator
At1D1460_26560	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
At1D1460_26570	COG0837	glucose binding
At1D1460_26580	COG1803	Methylglyoxal synthase
At1D1460_26590	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
At1D1460_26600	COG4166	transmembrane transport
At1D1460_26610	COG4174	ABC transporter (Permease)
At1D1460_26620	COG4239	(ABC) transporter, permease
At1D1460_26630	COG4172	Belongs to the ABC transporter superfamily
At1D1460_26640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_26650	COG0174	glutamine synthetase
At1D1460_26660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_26670	COG3265	gluconokinase activity
At1D1460_26680	COG1174	glycine betaine transport
At1D1460_26690	COG1125	glycine betaine transport
At1D1460_26700	COG1174	glycine betaine transport
At1D1460_26710	COG1732	Glycine betaine
At1D1460_26730	COG1959	2 iron, 2 sulfur cluster binding
At1D1460_26740	COG1840	ABC-type Fe3 transport system, periplasmic component
At1D1460_26750	COG0501	Belongs to the peptidase M48B family
At1D1460_26760	COG4269	membrane
At1D1460_26790	COG0697	spore germination
At1D1460_26820	COG0791	NLP P60 protein
At1D1460_26840	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
At1D1460_26850	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
At1D1460_26920	COG4964	Belongs to the GSP D family
At1D1460_26990	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
At1D1460_27000	COG3422	double-strand break repair
At1D1460_27010	COG3757	hydrolase, family 25
At1D1460_27020	COG0697	spore germination
At1D1460_27030	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
At1D1460_27060	COG0492	ferredoxin-NADP+ reductase activity
At1D1460_27090	COG0481	GTPase activity
At1D1460_27100	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
At1D1460_27130	COG1396	sequence-specific DNA binding
At1D1460_27160	COG2169	Transcriptional regulator
At1D1460_27160	COG1917	Cupin 2, conserved barrel domain protein
At1D1460_27170	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
At1D1460_27220	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
At1D1460_27230	COG0291	Belongs to the bacterial ribosomal protein bL35 family
At1D1460_27240	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
At1D1460_27260	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
At1D1460_27270	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
At1D1460_27270	COG0072	phenylalanine-tRNA ligase activity
At1D1460_27280	COG0667	Aldo Keto reductase
At1D1460_27320	COG4977	sequence-specific DNA binding
At1D1460_27370	COG1570	exodeoxyribonuclease VII activity
At1D1460_27380	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_27400	COG1846	Transcriptional regulator
At1D1460_27410	COG0697	spore germination
At1D1460_27420	COG2309	aminopeptidase activity
At1D1460_27440	COG1393	Belongs to the ArsC family
At1D1460_27480	COG1309	transcriptional regulator
At1D1460_27500	COG0518	GMP synthase (glutamine-hydrolyzing) activity
At1D1460_27500	COG0519	Catalyzes the synthesis of GMP from XMP
At1D1460_27530	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
At1D1460_27590	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
At1D1460_27610	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
At1D1460_27630	COG1968	undecaprenyl-diphosphatase activity
At1D1460_27660	COG0284	orotidine-5'-phosphate decarboxylase activity
At1D1460_27680	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
At1D1460_27690	COG0592	DNA-directed DNA polymerase activity
At1D1460_27700	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
At1D1460_27710	COG0792	nuclease activity
At1D1460_27740	COG1175	transmembrane transport
At1D1460_27750	COG0395	ABC-type sugar transport system, permease component
At1D1460_27760	COG3842	ATPase activity
At1D1460_27780	COG0189	ligase activity
At1D1460_27790	COG0606	chelatase, subunit chli
At1D1460_27800	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
At1D1460_27810	COG1280	lysine exporter protein (LysE YggA)
At1D1460_27820	COG0756	dUTP diphosphatase activity
At1D1460_27830	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
At1D1460_27840	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
At1D1460_27870	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
At1D1460_27880	COG2226	methyltransferase
At1D1460_27890	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
At1D1460_27900	COG1024	Enoyl-CoA hydratase
At1D1460_27910	COG0268	Binds directly to 16S ribosomal RNA
At1D1460_28150	COG3727	T/G mismatch-specific endonuclease activity
At1D1460_28190	COG4372	Transposase
At1D1460_28250	COG3501	Rhs element vgr protein
At1D1460_28270	COG3422	double-strand break repair
At1D1460_28320	COG1309	transcriptional regulator
At1D1460_28350	COG1566	PFAM secretion protein HlyD family protein
At1D1460_28380	COG0668	transmembrane transport
At1D1460_28460	COG0411	ABC transporter
At1D1460_28470	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
At1D1460_28480	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
At1D1460_28490	COG1454	alcohol dehydrogenase
At1D1460_28500	COG0747	negative chemotaxis
At1D1460_28510	COG0601	transmembrane transport
At1D1460_28530	COG4608	Belongs to the ABC transporter superfamily
At1D1460_28540	COG1349	DNA-binding transcription factor activity
At1D1460_28550	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
At1D1460_28600	COG4302	ethanolamine ammonia-lyase activity
At1D1460_28610	COG0025	NhaP-type Na H and K H
At1D1460_28620	COG4106	trans-aconitate 2-methyltransferase activity
At1D1460_28650	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_28660	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_28670	COG0601	transmembrane transport
At1D1460_28680	COG0747	negative chemotaxis
At1D1460_28720	COG4172	Belongs to the ABC transporter superfamily
At1D1460_28730	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
At1D1460_28740	COG3706	GGDEF domain
At1D1460_28800	COG0745	RESPONSE REGULATOR receiver
At1D1460_28810	COG2205	protein histidine kinase activity
At1D1460_28820	COG1764	response to oxidative stress
At1D1460_28840	COG0596	Alpha beta hydrolase
At1D1460_28880	COG0783	Belongs to the Dps family
At1D1460_28890	COG0243	molybdopterin cofactor binding
At1D1460_28910	COG4566	intracellular signal transduction
At1D1460_28920	COG4566	intracellular signal transduction
At1D1460_28940	COG2140	Oxalate decarboxylase
At1D1460_28990	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
At1D1460_29010	COG1414	Transcriptional regulator
At1D1460_29040	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_29080	COG1522	sequence-specific DNA binding
At1D1460_29090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
At1D1460_29110	COG0702	epimerase
At1D1460_29130	COG2233	PERMEase
At1D1460_29230	COG0395	ABC-type sugar transport system, permease component
At1D1460_29240	COG1176	ABC-type spermidine putrescine transport system, permease component I
At1D1460_29260	COG3842	ATPase activity
At1D1460_29340	COG1653	transport
At1D1460_29360	COG0395	ABC-type sugar transport system, permease component
At1D1460_29370	COG3842	ATPase activity
At1D1460_29390	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_29400	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_29410	COG1116	anion transmembrane transporter activity
At1D1460_29420	COG0395	ABC-type sugar transport system, permease component
At1D1460_29430	COG1175	transmembrane transport
At1D1460_29490	COG1609	Transcriptional regulator
At1D1460_29520	COG1082	Xylose isomerase domain protein TIM barrel
At1D1460_29550	COG3842	ATPase activity
At1D1460_29560	COG0395	ABC-type sugar transport system, permease component
At1D1460_29570	COG1175	transmembrane transport
At1D1460_29580	COG1653	transport
At1D1460_29590	COG1309	transcriptional regulator
At1D1460_29600	COG0673	inositol 2-dehydrogenase activity
At1D1460_29630	COG0673	inositol 2-dehydrogenase activity
At1D1460_29660	COG1278	Cold shock
At1D1460_29680	COG0828	Belongs to the bacterial ribosomal protein bS21 family
At1D1460_29740	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
At1D1460_29750	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
At1D1460_29790	COG0395	ABC-type sugar transport system, permease component
At1D1460_29800	COG1175	transmembrane transport
At1D1460_29840	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
At1D1460_29850	COG3618	amidohydrolase
At1D1460_29860	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_29870	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_29880	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_29890	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
At1D1460_29900	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
At1D1460_29910	COG2186	Transcriptional regulator
At1D1460_29940	COG0667	Aldo Keto reductase
At1D1460_30000	COG4977	sequence-specific DNA binding
At1D1460_30010	COG2223	nitrite transmembrane transporter activity
At1D1460_30020	COG0583	DNA-binding transcription factor activity
At1D1460_30030	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
At1D1460_30050	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
At1D1460_30060	COG2084	Dehydrogenase
At1D1460_30090	COG1609	Transcriptional regulator
At1D1460_30100	COG1063	alcohol dehydrogenase
At1D1460_30110	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_30130	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_30140	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
At1D1460_30150	COG1175	transmembrane transport
At1D1460_30160	COG0395	ABC-type sugar transport system, permease component
At1D1460_30190	COG0395	ABC-type sugar transport system, permease component
At1D1460_30220	COG0626	cystathionine gamma-synthase activity
At1D1460_30250	COG0803	Belongs to the bacterial solute-binding protein 9 family
At1D1460_30270	COG1121	(ABC) transporter
At1D1460_30280	COG0523	cobalamin synthesis protein
At1D1460_30310	COG0523	cobalamin synthesis protein
At1D1460_30320	COG1653	transport
At1D1460_30330	COG1175	transmembrane transport
At1D1460_30340	COG0395	ABC-type sugar transport system, permease component
At1D1460_30350	COG3842	ATPase activity
At1D1460_30370	COG3047	cAMP biosynthetic process
At1D1460_30420	COG0583	DNA-binding transcription factor activity
At1D1460_30430	COG1879	ABC-type sugar transport system periplasmic component
At1D1460_30440	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_30450	COG1129	ABC transporter
At1D1460_30470	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
At1D1460_30480	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_30500	COG3257	ureidoglycine aminohydrolase activity
At1D1460_30520	COG5001	Diguanylate cyclase
At1D1460_30530	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
At1D1460_30550	COG0747	negative chemotaxis
At1D1460_30560	COG0601	transmembrane transport
At1D1460_30570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_30590	COG4608	Belongs to the ABC transporter superfamily
At1D1460_30600	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
At1D1460_30630	COG0346	lactoylglutathione lyase activity
At1D1460_30650	COG0129	dihydroxy-acid dehydratase activity
At1D1460_30660	COG1879	ABC-type sugar transport system periplasmic component
At1D1460_30670	COG1129	ABC transporter
At1D1460_30680	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_30690	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_30700	COG2186	Transcriptional regulator
At1D1460_30730	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
At1D1460_30740	COG0587	DNA-directed DNA polymerase activity
At1D1460_30750	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
At1D1460_30800	COG0673	inositol 2-dehydrogenase activity
At1D1460_30820	COG3842	ATPase activity
At1D1460_30830	COG0395	ABC-type sugar transport system, permease component
At1D1460_30840	COG1175	transmembrane transport
At1D1460_30850	COG1653	transport
At1D1460_30870	COG0673	inositol 2-dehydrogenase activity
At1D1460_30900	COG5001	Diguanylate cyclase
At1D1460_30930	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
At1D1460_30940	COG2894	cell division
At1D1460_30950	COG0850	regulation of cytokinetic process
At1D1460_30960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
At1D1460_30980	COG2186	Transcriptional regulator
At1D1460_30990	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
At1D1460_31010	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
At1D1460_31020	COG1063	alcohol dehydrogenase
At1D1460_31030	COG1312	Catalyzes the dehydration of D-mannonate
At1D1460_31070	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
At1D1460_31080	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
At1D1460_31090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_31110	COG0640	Transcriptional regulator
At1D1460_31120	COG0625	glutathione transferase activity
At1D1460_31130	COG4172	Belongs to the ABC transporter superfamily
At1D1460_31140	COG1921	L-seryl-tRNASec selenium transferase activity
At1D1460_31170	COG3964	amidohydrolase
At1D1460_31190	COG0601	transmembrane transport
At1D1460_31200	COG0747	negative chemotaxis
At1D1460_31210	COG0438	transferase activity, transferring glycosyl groups
At1D1460_31300	COG4989	oxidoreductase activity
At1D1460_31340	COG4943	cyclic-guanylate-specific phosphodiesterase activity
At1D1460_31370	COG3842	ATPase activity
At1D1460_31380	COG1653	transport
At1D1460_31390	COG1175	transmembrane transport
At1D1460_31400	COG0395	ABC-type sugar transport system, permease component
At1D1460_31410	COG1501	Belongs to the glycosyl hydrolase 31 family
At1D1460_31430	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_31440	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_31450	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
At1D1460_31460	COG0352	thiamine-phosphate diphosphorylase activity
At1D1460_31470	COG0351	phosphomethylpyrimidine kinase
At1D1460_31490	COG1522	sequence-specific DNA binding
At1D1460_31500	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
At1D1460_31510	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_31540	COG2204	response regulator
At1D1460_31550	COG4191	Histidine kinase
At1D1460_31560	COG1301	dicarboxylic acid transport
At1D1460_31570	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
At1D1460_31580	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_31640	COG1215	transferase activity, transferring glycosyl groups
At1D1460_31660	COG2942	2-epimerase
At1D1460_31710	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
At1D1460_31730	COG2197	response regulator
At1D1460_31790	COG3307	-O-antigen
At1D1460_31800	COG1596	polysaccharide export
At1D1460_31810	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
At1D1460_31840	COG0840	transmembrane signaling receptor activity
At1D1460_31840	COG2972	Histidine kinase
At1D1460_31850	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_31870	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_31890	COG2094	Belongs to the DNA glycosylase MPG family
At1D1460_31920	COG1609	Transcriptional regulator
At1D1460_31930	COG1653	transport
At1D1460_31960	COG3842	ATPase activity
At1D1460_31980	COG0673	inositol 2-dehydrogenase activity
At1D1460_31990	COG0602	queuosine metabolic process
At1D1460_32000	COG0720	synthase
At1D1460_32010	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
At1D1460_32040	COG0673	inositol 2-dehydrogenase activity
At1D1460_32070	COG0395	ABC-type sugar transport system, permease component
At1D1460_32130	COG0583	DNA-binding transcription factor activity
At1D1460_32140	COG0280	phosphate acetyltransferase
At1D1460_32140	COG0281	malic enzyme
At1D1460_32170	COG0765	amino acid transport
At1D1460_32180	COG1126	abc transporter atp-binding protein
At1D1460_32190	COG2079	MmgE PrpD family protein
At1D1460_32220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_32250	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
At1D1460_32270	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
At1D1460_32280	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
At1D1460_32290	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_32300	COG1129	ABC transporter
At1D1460_32320	COG1473	amidohydrolase
At1D1460_32330	COG0747	negative chemotaxis
At1D1460_32370	COG0601	transmembrane transport
At1D1460_32380	COG0583	DNA-binding transcription factor activity
At1D1460_32390	COG1446	asparaginase
At1D1460_32420	COG0747	negative chemotaxis
At1D1460_32460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_32470	COG0601	transmembrane transport
At1D1460_32480	COG2197	response regulator
At1D1460_32490	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
At1D1460_32500	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
At1D1460_32520	COG3842	ATPase activity
At1D1460_32530	COG0395	ABC-type sugar transport system, permease component
At1D1460_32540	COG1175	transmembrane transport
At1D1460_32560	COG0673	inositol 2-dehydrogenase activity
At1D1460_32570	COG0673	inositol 2-dehydrogenase activity
At1D1460_32610	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_32620	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
At1D1460_32660	COG1595	DNA-templated transcription, initiation
At1D1460_32670	COG1120	ATPase activity
At1D1460_32680	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_32710	COG2226	methyltransferase
At1D1460_32730	COG1120	ATPase activity
At1D1460_32740	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_32830	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_32840	COG0473	3-isopropylmalate dehydrogenase activity
At1D1460_32850	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_32860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_32940	COG4172	Belongs to the ABC transporter superfamily
At1D1460_32950	COG1522	sequence-specific DNA binding
At1D1460_33000	COG0583	DNA-binding transcription factor activity
At1D1460_33030	COG1126	abc transporter atp-binding protein
At1D1460_33050	COG1473	amidohydrolase
At1D1460_33060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_33070	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_33080	COG1959	2 iron, 2 sulfur cluster binding
At1D1460_33100	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
At1D1460_33110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_33170	COG1960	acyl-CoA dehydrogenase activity
At1D1460_33190	COG0747	negative chemotaxis
At1D1460_33220	COG0444	Belongs to the ABC transporter superfamily
At1D1460_33240	COG0667	Aldo Keto reductase
At1D1460_33260	COG0583	DNA-binding transcription factor activity
At1D1460_33280	COG4166	transmembrane transport
At1D1460_33300	COG0747	negative chemotaxis
At1D1460_33310	COG1473	amidohydrolase
At1D1460_33320	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_33360	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_33400	COG4608	Belongs to the ABC transporter superfamily
At1D1460_33410	COG0444	Belongs to the ABC transporter superfamily
At1D1460_33430	COG0601	transmembrane transport
At1D1460_33450	COG2186	Transcriptional regulator
At1D1460_33480	COG0300	oxidoreductase activity
At1D1460_33500	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
At1D1460_33500	COG3453	Protein conserved in bacteria
At1D1460_33510	COG0640	Transcriptional regulator
At1D1460_33530	COG2391	methyltransferase activity
At1D1460_33540	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
At1D1460_33560	COG0022	dehydrogenase e1 component
At1D1460_33580	COG1960	acyl-CoA dehydrogenase activity
At1D1460_33590	COG0183	Belongs to the thiolase family
At1D1460_33610	COG1960	acyl-CoA dehydrogenase activity
At1D1460_33620	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
At1D1460_33660	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
At1D1460_33670	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
At1D1460_33680	COG4952	isomerase
At1D1460_33690	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_33690	COG3347	Dehydrogenase
At1D1460_33700	COG1349	DNA-binding transcription factor activity
At1D1460_33720	COG1129	ABC transporter
At1D1460_33730	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_33740	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_33750	COG3254	rhamnose metabolic process
At1D1460_33780	COG2264	protein methyltransferase activity
At1D1460_33790	COG5001	Diguanylate cyclase
At1D1460_33820	COG4335	DNA alkylation repair
At1D1460_33830	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
At1D1460_33840	COG4208	sulfate ABC transporter
At1D1460_33860	COG4150	thiosulfate binding
At1D1460_33880	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
At1D1460_33910	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
At1D1460_33930	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
At1D1460_33950	COG1040	competence protein
At1D1460_33960	COG2226	methyltransferase
At1D1460_33990	COG0494	nUDIX hydrolase
At1D1460_34010	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
At1D1460_34020	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
At1D1460_34030	COG0653	protein targeting
At1D1460_34040	COG0697	spore germination
At1D1460_34160	COG2244	polysaccharide biosynthetic process
At1D1460_34200	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
At1D1460_34220	COG0489	protein tyrosine kinase activity
At1D1460_34220	COG3206	protein involved in exopolysaccharide biosynthesis
At1D1460_34260	COG0438	transferase activity, transferring glycosyl groups
At1D1460_34270	COG0438	transferase activity, transferring glycosyl groups
At1D1460_34310	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
At1D1460_34320	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
At1D1460_34320	COG2273	Hydrolase Family 16
At1D1460_34350	COG3842	ATPase activity
At1D1460_34360	COG3833	ABC-type maltose transport systems, permease component
At1D1460_34470	COG1396	sequence-specific DNA binding
At1D1460_34490	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
At1D1460_34500	COG1129	ABC transporter
At1D1460_34510	COG4214	carbohydrate transport
At1D1460_34520	COG4213	ABC transporter substrate-binding protein
At1D1460_34600	COG0625	glutathione transferase activity
At1D1460_34610	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
At1D1460_34620	COG3800	Transcriptional regulator
At1D1460_34620	COG1396	sequence-specific DNA binding
At1D1460_34640	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
At1D1460_34660	COG0300	oxidoreductase activity
At1D1460_34680	COG2096	Adenosyltransferase
At1D1460_34700	COG2086	electron transfer activity
At1D1460_34720	COG1250	3-hydroxyacyl-CoA dehydrogenase
At1D1460_34740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
At1D1460_34750	COG0165	Argininosuccinate lyase
At1D1460_34820	COG2884	Cell division ATP-binding protein ftsE
At1D1460_34860	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
At1D1460_34880	COG0287	Prephenate dehydrogenase
At1D1460_34890	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
At1D1460_34900	COG2226	methyltransferase
At1D1460_34910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
At1D1460_34940	COG0227	Belongs to the bacterial ribosomal protein bL28 family
At1D1460_34950	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
At1D1460_35030	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
At1D1460_35040	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
At1D1460_35060	COG4974	Belongs to the 'phage' integrase family
At1D1460_35070	COG0825	malonyl-CoA metabolic process
At1D1460_35080	COG3034	peptidoglycan biosynthetic process
At1D1460_35090	COG0425	Belongs to the sulfur carrier protein TusA family
At1D1460_35090	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
At1D1460_35100	COG0523	cobalamin synthesis protein
At1D1460_35110	COG1686	Belongs to the peptidase S11 family
At1D1460_35120	COG1473	amidohydrolase
At1D1460_35140	COG4953	penicillin-binding protein 1C
At1D1460_35150	COG2373	Large extracellular alpha-helical protein
At1D1460_35160	COG2835	tetraacyldisaccharide 4'-kinase activity
At1D1460_35210	COG0482	sulfurtransferase activity
At1D1460_35240	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
At1D1460_35270	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
At1D1460_35280	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
At1D1460_35290	COG0037	tRNA processing
At1D1460_35310	COG2885	chlorophyll binding
At1D1460_35320	COG0823	Involved in the tonB-independent uptake of proteins
At1D1460_35360	COG0824	Thioesterase
At1D1460_35380	COG0494	nUDIX hydrolase
At1D1460_35410	COG2255	four-way junction helicase activity
At1D1460_35420	COG0632	four-way junction helicase activity
At1D1460_35430	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
At1D1460_35440	COG0840	transmembrane signaling receptor activity
At1D1460_35450	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_35460	COG0217	transcriptional regulatory protein
At1D1460_35490	COG1692	metallophosphoesterase
At1D1460_35510	COG1253	flavin adenine dinucleotide binding
At1D1460_35580	COG0126	phosphoglycerate kinase activity
At1D1460_35590	COG3588	fructose-bisphosphate aldolase
At1D1460_35640	COG0254	rRNA binding
At1D1460_35650	COG1132	(ABC) transporter
At1D1460_35690	COG0483	inositol monophosphate 1-phosphatase activity
At1D1460_35760	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
At1D1460_35770	COG0257	Belongs to the bacterial ribosomal protein bL36 family
At1D1460_35780	COG0457	Tetratricopeptide repeat
At1D1460_35790	COG3750	Belongs to the UPF0335 family
At1D1460_35830	COG0469	pyruvate kinase activity
At1D1460_35840	COG3108	Peptidase M15
At1D1460_35850	COG2204	response regulator
At1D1460_35860	COG1164	Oligoendopeptidase f
At1D1460_35870	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
At1D1460_35880	COG3706	GGDEF domain
At1D1460_35880	COG0745	RESPONSE REGULATOR receiver
At1D1460_35890	COG5310	Homospermidine synthase
At1D1460_35910	COG0737	Belongs to the 5'-nucleotidase family
At1D1460_35920	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
At1D1460_35930	COG0330	HflC and HflK could
At1D1460_35980	COG1210	Utp--glucose-1-phosphate uridylyltransferase
At1D1460_35990	COG2951	lytic endotransglycosylase activity
At1D1460_36020	COG0745	RESPONSE REGULATOR receiver
At1D1460_36030	COG2205	protein histidine kinase activity
At1D1460_36050	COG0067	glutamate synthase
At1D1460_36050	COG0070	glutamate synthase
At1D1460_36050	COG0069	glutamate synthase activity
At1D1460_36080	COG2205	protein histidine kinase activity
At1D1460_36090	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
At1D1460_36100	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
At1D1460_36120	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
At1D1460_36140	COG0252	asparaginase activity
At1D1460_36160	COG1027	Aspartate ammonia-lyase
At1D1460_36170	COG2186	Transcriptional regulator
At1D1460_36210	COG1309	transcriptional regulator
At1D1460_36250	COG4176	ABC-type proline glycine betaine transport system permease component
At1D1460_36260	COG0517	IMP dehydrogenase activity
At1D1460_36260	COG4175	Glycine betaine
At1D1460_36270	COG2986	histidine ammonia-lyase
At1D1460_36290	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_36300	COG4172	Belongs to the ABC transporter superfamily
At1D1460_36320	COG0601	transmembrane transport
At1D1460_36330	COG0747	negative chemotaxis
At1D1460_36350	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
At1D1460_36360	COG1454	alcohol dehydrogenase
At1D1460_36370	COG2186	Transcriptional regulator
At1D1460_36400	COG1607	acyl-coa hydrolase
At1D1460_36440	COG2308	Evidence 4 Homologs of previously reported genes of
At1D1460_36440	COG2307	Protein conserved in bacteria
At1D1460_36470	COG0488	(ABC) transporter
At1D1460_36480	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
At1D1460_36490	COG2186	Transcriptional regulator
At1D1460_36520	COG1175	transmembrane transport
At1D1460_36530	COG0395	ABC-type sugar transport system, permease component
At1D1460_36550	COG3842	ATPase activity
At1D1460_36590	COG2171	N-acyltransferase activity
At1D1460_36600	COG1304	FMN binding
At1D1460_36630	COG1063	alcohol dehydrogenase
At1D1460_36640	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
At1D1460_36650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_36670	COG0765	amino acid transport
At1D1460_36680	COG0765	amino acid transport
At1D1460_36690	COG4221	oxidoreductase activity
At1D1460_36700	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
At1D1460_36710	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_36720	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
At1D1460_36750	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
At1D1460_36780	COG0697	spore germination
At1D1460_36790	COG0697	spore germination
At1D1460_36800	COG0511	ligase activity, forming carbon-carbon bonds
At1D1460_36810	COG0439	Biotin carboxylase
At1D1460_36830	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
At1D1460_36840	COG1984	allophanate hydrolase subunit 2
At1D1460_36850	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
At1D1460_36860	COG3842	ATPase activity
At1D1460_36880	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
At1D1460_36890	COG1176	ABC-type spermidine putrescine transport system, permease component I
At1D1460_36930	COG0840	transmembrane signaling receptor activity
At1D1460_36940	COG1070	Carbohydrate kinase
At1D1460_36950	COG1830	Aldolase
At1D1460_36960	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
At1D1460_36970	COG0667	Aldo Keto reductase
At1D1460_36990	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_37000	COG1129	ABC transporter
At1D1460_37060	COG0071	Belongs to the small heat shock protein (HSP20) family
At1D1460_37090	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
At1D1460_37120	COG0395	ABC-type sugar transport system, permease component
At1D1460_37150	COG3842	ATPase activity
At1D1460_37180	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
At1D1460_37180	COG1648	precorrin-2 dehydrogenase activity
At1D1460_37190	COG0243	molybdopterin cofactor binding
At1D1460_37220	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
At1D1460_37230	COG1116	anion transmembrane transporter activity
At1D1460_37240	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_37250	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_37270	COG3707	response regulator
At1D1460_37280	COG1802	Transcriptional regulator
At1D1460_37290	COG1914	H( )-stimulated, divalent metal cation uptake system
At1D1460_37300	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
At1D1460_37310	COG4336	lyase activity
At1D1460_37320	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
At1D1460_37330	COG4770	biotin carboxylase activity
At1D1460_37340	COG0366	Alpha amylase catalytic
At1D1460_37360	COG4771	TonB-dependent receptor
At1D1460_37370	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
At1D1460_37410	COG1414	Transcriptional regulator
At1D1460_37420	COG1475	DNA binding
At1D1460_37430	COG1192	Involved in chromosome partitioning
At1D1460_37490	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
At1D1460_37510	COG2986	histidine ammonia-lyase
At1D1460_37520	COG1228	amidohydrolase
At1D1460_37530	COG0402	S-adenosylhomocysteine deaminase activity
At1D1460_37550	COG4172	Belongs to the ABC transporter superfamily
At1D1460_37560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_37570	COG0601	transmembrane transport
At1D1460_37580	COG4166	transmembrane transport
At1D1460_37590	COG0395	ABC-type sugar transport system, permease component
At1D1460_37620	COG1566	PFAM secretion protein HlyD family protein
At1D1460_37660	COG2207	Transcriptional regulator
At1D1460_37670	COG1309	transcriptional regulator
At1D1460_37680	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_37730	COG1846	Transcriptional regulator
At1D1460_37740	COG0583	DNA-binding transcription factor activity
At1D1460_37750	COG2828	Protein conserved in bacteria
At1D1460_37780	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_37810	COG0840	transmembrane signaling receptor activity
At1D1460_37830	COG0583	DNA-binding transcription factor activity
At1D1460_37840	COG0346	lactoylglutathione lyase activity
At1D1460_37870	COG1574	metal-dependent hydrolase with the TIM-barrel fold
At1D1460_37910	COG0583	DNA-binding transcription factor activity
At1D1460_37920	COG0477	Major facilitator Superfamily
At1D1460_37940	COG2205	protein histidine kinase activity
At1D1460_37950	COG0745	RESPONSE REGULATOR receiver
At1D1460_37960	COG0671	phosphoesterase, PA-phosphatase related
At1D1460_38060	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
At1D1460_38070	COG0156	8-amino-7-oxononanoate synthase activity
At1D1460_38080	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
At1D1460_38090	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
At1D1460_38100	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
At1D1460_38140	COG0697	spore germination
At1D1460_38150	COG0673	inositol 2-dehydrogenase activity
At1D1460_38190	COG0477	Major facilitator Superfamily
At1D1460_38200	COG0642	Histidine kinase
At1D1460_38210	COG0745	RESPONSE REGULATOR receiver
At1D1460_38220	COG2194	sulfuric ester hydrolase activity
At1D1460_38240	COG0583	DNA-binding transcription factor activity
At1D1460_38250	COG4774	siderophore transport
At1D1460_38280	COG1120	ATPase activity
At1D1460_38300	COG3474	cytochrome
At1D1460_38310	COG2137	regulation of response to DNA damage stimulus
At1D1460_38320	COG3386	PFAM SMP-30 Gluconolaconase
At1D1460_38340	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_38350	COG1129	ABC transporter
At1D1460_38360	COG1879	ABC-type sugar transport system periplasmic component
At1D1460_38370	COG4585	Histidine kinase
At1D1460_38380	COG2197	response regulator
At1D1460_38400	COG2133	pyrroloquinoline quinone binding
At1D1460_38420	COG0500	methyltransferase
At1D1460_38430	COG0564	pseudouridine synthase activity
At1D1460_38460	COG4175	Glycine betaine
At1D1460_38460	COG3448	diguanylate cyclase activity
At1D1460_38470	COG4176	ABC-type proline glycine betaine transport system permease component
At1D1460_38490	COG4191	Histidine kinase
At1D1460_38490	COG0784	Response regulator, receiver
At1D1460_38500	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
At1D1460_38510	COG0489	protein tyrosine kinase activity
At1D1460_38510	COG3206	protein involved in exopolysaccharide biosynthesis
At1D1460_38520	COG1210	Utp--glucose-1-phosphate uridylyltransferase
At1D1460_38530	COG1215	transferase activity, transferring glycosyl groups
At1D1460_38540	COG1215	transferase activity, transferring glycosyl groups
At1D1460_38550	COG1215	transferase activity, transferring glycosyl groups
At1D1460_38560	COG0438	transferase activity, transferring glycosyl groups
At1D1460_38570	COG2273	Hydrolase Family 16
At1D1460_38580	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
At1D1460_38590	COG2244	polysaccharide biosynthetic process
At1D1460_38600	COG0463	Glycosyl transferase, family 2
At1D1460_38610	COG2327	Polysaccharide pyruvyl transferase
At1D1460_38620	COG1215	transferase activity, transferring glycosyl groups
At1D1460_38660	COG0828	Belongs to the bacterial ribosomal protein bS21 family
At1D1460_38670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_38700	COG0404	The glycine cleavage system catalyzes the degradation of glycine
At1D1460_38700	COG0446	pyridine nucleotide-disulphide oxidoreductase
At1D1460_38740	COG1523	belongs to the glycosyl hydrolase 13 family
At1D1460_38750	COG0033	Phosphoglucomutase
At1D1460_38760	COG0297	glycogen (starch) synthase activity
At1D1460_38770	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
At1D1460_38780	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
At1D1460_38790	COG0058	SHG alpha-glucan phosphorylase activity
At1D1460_38810	COG1794	racemase activity, acting on amino acids and derivatives
At1D1460_38820	COG1522	sequence-specific DNA binding
At1D1460_38840	COG2084	Dehydrogenase
At1D1460_38850	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_38860	COG1063	alcohol dehydrogenase
At1D1460_38880	COG4988	ABC transporter
At1D1460_38890	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
At1D1460_38910	COG1294	oxidase, subunit
At1D1460_38970	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
At1D1460_38980	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
At1D1460_39030	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
At1D1460_39040	COG0539	negative regulation of cytoplasmic translation
At1D1460_39100	COG4221	oxidoreductase activity
At1D1460_39120	COG0747	negative chemotaxis
At1D1460_39130	COG0601	transmembrane transport
At1D1460_39140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_39150	COG0444	Belongs to the ABC transporter superfamily
At1D1460_39160	COG4608	Belongs to the ABC transporter superfamily
At1D1460_39170	COG0246	Mannitol dehydrogenase
At1D1460_39200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_39240	COG0410	ABC transporter
At1D1460_39250	COG0559	Belongs to the binding-protein-dependent transport system permease family
At1D1460_39290	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
At1D1460_39300	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_39330	COG4993	Dehydrogenase
At1D1460_39340	COG3685	Protein conserved in bacteria
At1D1460_39400	COG0693	protein deglycase activity
At1D1460_39440	COG0189	ligase activity
At1D1460_39450	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
At1D1460_39460	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
At1D1460_39480	COG0435	Glutathione S-transferase
At1D1460_39490	COG0583	DNA-binding transcription factor activity
At1D1460_39500	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_39510	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_39520	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_39530	COG1116	anion transmembrane transporter activity
At1D1460_39550	COG1522	sequence-specific DNA binding
At1D1460_39580	COG0784	Response regulator, receiver
At1D1460_39600	COG3920	Histidine kinase
At1D1460_39620	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
At1D1460_39650	COG0019	diaminopimelate decarboxylase activity
At1D1460_39680	COG0527	aspartate kinase activity
At1D1460_39700	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
At1D1460_39710	COG2890	protein-(glutamine-N5) methyltransferase activity
At1D1460_39730	COG0542	response to heat
At1D1460_39740	COG0741	lytic transglycosylase activity
At1D1460_39740	COG1196	nuclear chromosome segregation
At1D1460_39740	COG0739	heme binding
At1D1460_39760	COG3609	addiction module antidote protein, CC2985 family
At1D1460_39840	COG2376	Dihydroxyacetone kinase
At1D1460_39850	COG1522	sequence-specific DNA binding
At1D1460_39890	COG0431	NADPH-dependent FMN reductase
At1D1460_39910	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_39930	COG4172	Belongs to the ABC transporter superfamily
At1D1460_39940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_39980	COG0277	FAD linked oxidase domain protein
At1D1460_40020	COG0778	Nitroreductase
At1D1460_40080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
At1D1460_40130	COG2318	DinB family
At1D1460_40140	COG0583	DNA-binding transcription factor activity
At1D1460_40170	COG1335	isochorismatase
At1D1460_40190	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
At1D1460_40200	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
At1D1460_40230	COG3842	ATPase activity
At1D1460_40240	COG1176	ABC-type spermidine putrescine transport system, permease component I
At1D1460_40250	COG1177	transmembrane transport
At1D1460_40260	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
At1D1460_40280	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
At1D1460_40310	COG1120	ATPase activity
At1D1460_40320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_40330	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_40340	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
At1D1460_40350	COG1629	transport
At1D1460_40350	COG4774	siderophore transport
At1D1460_40360	COG4702	Belongs to the UPF0303 family
At1D1460_40400	COG1024	Enoyl-CoA hydratase
At1D1460_40420	COG1653	transport
At1D1460_40450	COG3842	ATPase activity
At1D1460_40500	COG3474	cytochrome
At1D1460_40510	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
At1D1460_40520	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
At1D1460_40530	COG1845	cytochrome c oxidase, subunit III
At1D1460_40560	COG0047	phosphoribosylformylglycinamidine synthase activity
At1D1460_40590	COG0404	The glycine cleavage system catalyzes the degradation of glycine
At1D1460_40590	COG0446	pyridine nucleotide-disulphide oxidoreductase
At1D1460_40610	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
At1D1460_40650	COG1309	transcriptional regulator
At1D1460_40680	COG1136	(ABC) transporter
At1D1460_40710	COG1063	alcohol dehydrogenase
At1D1460_40730	COG1879	ABC-type sugar transport system periplasmic component
At1D1460_40750	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_40790	COG0477	Major facilitator Superfamily
At1D1460_41000	COG3501	Rhs element vgr protein
At1D1460_41040	COG5001	Diguanylate cyclase
At1D1460_41040	COG3300	MHYT domain
At1D1460_41090	COG1253	flavin adenine dinucleotide binding
At1D1460_41120	COG3842	ATPase activity
At1D1460_41130	COG0395	ABC-type sugar transport system, permease component
At1D1460_41140	COG1175	transmembrane transport
At1D1460_41150	COG1653	transport
At1D1460_41170	COG0673	inositol 2-dehydrogenase activity
At1D1460_41180	COG1609	Transcriptional regulator
At1D1460_41210	COG0583	DNA-binding transcription factor activity
At1D1460_41230	COG3547	Transposase (IS116 IS110 IS902 family)
At1D1460_41240	COG1879	ABC-type sugar transport system periplasmic component
At1D1460_41250	COG1129	ABC transporter
At1D1460_41260	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_41270	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_41280	COG1609	Transcriptional regulator
At1D1460_41300	COG0673	inositol 2-dehydrogenase activity
At1D1460_41420	COG0714	Associated with various cellular activities
At1D1460_41430	COG3256	nitric oxide reductase
At1D1460_41460	COG1845	cytochrome c oxidase, subunit III
At1D1460_41490	COG0163	prenyltransferase activity
At1D1460_41500	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
At1D1460_41510	COG3189	MarR family transcriptional regulator
At1D1460_41580	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
At1D1460_41600	COG4459	periplasmic nitrate reductase
At1D1460_41630	COG0243	molybdopterin cofactor binding
At1D1460_41650	COG3005	denitrification pathway
At1D1460_41680	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_41690	COG3433	isochorismatase activity
At1D1460_41690	COG1535	isochorismatase
At1D1460_41700	COG1021	2,3-dihydroxybenzoate-AMP ligase
At1D1460_41710	COG1169	isochorismate synthase
At1D1460_41730	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
At1D1460_41730	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
At1D1460_41740	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
At1D1460_41760	COG2375	cellular response to nickel ion
At1D1460_41790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_41800	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_41840	COG1629	transport
At1D1460_41840	COG4774	siderophore transport
At1D1460_41850	COG1960	acyl-CoA dehydrogenase activity
At1D1460_41860	COG0583	DNA-binding transcription factor activity
At1D1460_41870	COG1609	Transcriptional regulator
At1D1460_41890	COG1176	ABC-type spermidine putrescine transport system, permease component I
At1D1460_41910	COG3842	ATPase activity
At1D1460_41930	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
At1D1460_41940	COG0583	DNA-binding transcription factor activity
At1D1460_41950	COG2814	Major facilitator Superfamily
At1D1460_41960	COG1473	amidohydrolase
At1D1460_41990	COG0747	negative chemotaxis
At1D1460_42000	COG0601	transmembrane transport
At1D1460_42020	COG0444	Belongs to the ABC transporter superfamily
At1D1460_42030	COG4608	Belongs to the ABC transporter superfamily
At1D1460_42040	COG0583	DNA-binding transcription factor activity
At1D1460_42050	COG0747	negative chemotaxis
At1D1460_42070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_42080	COG0154	amidase activity
At1D1460_42090	COG0693	protein deglycase activity
At1D1460_42110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_42120	COG0601	transmembrane transport
At1D1460_42140	COG1473	amidohydrolase
At1D1460_42150	COG4172	Belongs to the ABC transporter superfamily
At1D1460_42160	COG2390	Transcriptional regulator
At1D1460_42180	COG1175	transmembrane transport
At1D1460_42190	COG0395	ABC-type sugar transport system, permease component
At1D1460_42290	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
At1D1460_42320	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
At1D1460_42330	COG1414	Transcriptional regulator
At1D1460_42340	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_42360	COG1108	ABC-type Mn2 Zn2 transport systems permease components
At1D1460_42370	COG1108	ABC-type Mn2 Zn2 transport systems permease components
At1D1460_42380	COG1121	(ABC) transporter
At1D1460_42390	COG0803	Belongs to the bacterial solute-binding protein 9 family
At1D1460_42410	COG1752	Esterase of the alpha-beta hydrolase superfamily
At1D1460_42420	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
At1D1460_42430	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
At1D1460_42440	COG0471	metal ion transport
At1D1460_42440	COG3273	potassium ion transport
At1D1460_42450	COG1253	flavin adenine dinucleotide binding
At1D1460_42460	COG1309	transcriptional regulator
At1D1460_42500	COG1609	Transcriptional regulator
At1D1460_42510	COG1070	Carbohydrate kinase
At1D1460_42520	COG2115	Belongs to the xylose isomerase family
At1D1460_42540	COG0778	Nitroreductase
At1D1460_42550	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
At1D1460_42560	COG2011	ABC-type metal ion transport system permease component
At1D1460_42580	COG5001	Diguanylate cyclase
At1D1460_42580	COG3300	MHYT domain
At1D1460_42620	COG0800	Aldolase
At1D1460_42660	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
At1D1460_42740	COG0523	cobalamin synthesis protein
At1D1460_42760	COG1846	Transcriptional regulator
At1D1460_42770	COG1609	Transcriptional regulator
At1D1460_42780	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
At1D1460_42800	COG3718	enzyme involved in inositol metabolism
At1D1460_42820	COG3962	Belongs to the TPP enzyme family
At1D1460_42830	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_42860	COG0411	ABC transporter
At1D1460_42890	COG0683	leucine binding
At1D1460_42920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_42940	COG0747	negative chemotaxis
At1D1460_42950	COG4172	Belongs to the ABC transporter superfamily
At1D1460_43000	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
At1D1460_43010	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
At1D1460_43020	COG1126	abc transporter atp-binding protein
At1D1460_43030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_43040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_43050	COG0765	amino acid transport
At1D1460_43060	COG0765	amino acid transport
At1D1460_43070	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
At1D1460_43080	COG3485	protocatechuate 3,4-dioxygenase
At1D1460_43090	COG3485	protocatechuate 3,4-dioxygenase
At1D1460_43100	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
At1D1460_43120	COG0583	DNA-binding transcription factor activity
At1D1460_43150	COG1414	Transcriptional regulator
At1D1460_43170	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
At1D1460_43180	COG0183	Belongs to the thiolase family
At1D1460_43190	COG1609	Transcriptional regulator
At1D1460_43220	COG1082	Xylose isomerase domain protein TIM barrel
At1D1460_43230	COG1082	Xylose isomerase domain protein TIM barrel
At1D1460_43240	COG0673	inositol 2-dehydrogenase activity
At1D1460_43260	COG1609	Transcriptional regulator
At1D1460_43270	COG0395	ABC-type sugar transport system, permease component
At1D1460_43280	COG1175	transmembrane transport
At1D1460_43310	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
At1D1460_43350	COG2814	Major facilitator Superfamily
At1D1460_43360	COG4774	siderophore transport
At1D1460_43370	COG3712	iron ion homeostasis
At1D1460_43390	COG1940	carbohydrate kinase activity
At1D1460_43400	COG0584	glycerophosphoryl diester phosphodiesterase
At1D1460_43410	COG0300	oxidoreductase activity
At1D1460_43460	COG3842	ATPase activity
At1D1460_43610	COG0385	Bile acid
At1D1460_43620	COG0667	Aldo Keto reductase
At1D1460_43630	COG0583	DNA-binding transcription factor activity
At1D1460_43690	COG1132	(ABC) transporter
At1D1460_43730	COG3436	PFAM IS66 Orf2 family protein
At1D1460_43740	COG4372	Transposase
At1D1460_43760	COG2801	Transposase and inactivated derivatives
At1D1460_43790	COG2226	methyltransferase
At1D1460_43810	COG3436	PFAM IS66 Orf2 family protein
At1D1460_43820	COG4372	Transposase
At1D1460_43840	COG2801	Transposase and inactivated derivatives
At1D1460_43850	COG3754	Rhamnan synthesis protein F
At1D1460_43860	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
At1D1460_43870	COG2801	Transposase and inactivated derivatives
At1D1460_43880	COG2801	Transposase and inactivated derivatives
At1D1460_43900	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
At1D1460_43910	COG1091	dTDP-4-dehydrorhamnose reductase activity
At1D1460_43920	COG1088	dTDP-glucose 4,6-dehydratase activity
At1D1460_43930	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
At1D1460_43960	COG1609	Transcriptional regulator
At1D1460_43970	COG1233	COG1233 Phytoene dehydrogenase and related
At1D1460_44000	COG0395	ABC-type sugar transport system, permease component
At1D1460_44010	COG3842	ATPase activity
At1D1460_44050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_44060	COG0601	transmembrane transport
At1D1460_44070	COG2186	Transcriptional regulator
At1D1460_44090	COG0747	negative chemotaxis
At1D1460_44110	COG5001	Diguanylate cyclase
At1D1460_44110	COG3300	MHYT domain
At1D1460_44120	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_44140	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
At1D1460_44160	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
At1D1460_44170	COG0306	phosphate transporter
At1D1460_44180	COG1392	Phosphate transport regulator
At1D1460_44230	COG0745	RESPONSE REGULATOR receiver
At1D1460_44240	COG2205	protein histidine kinase activity
At1D1460_44270	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
At1D1460_44290	COG2207	Transcriptional regulator
At1D1460_44300	COG4774	siderophore transport
At1D1460_44320	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_44330	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
At1D1460_44340	COG1120	ATPase activity
At1D1460_44350	COG0583	DNA-binding transcription factor activity
At1D1460_44370	COG3119	arylsulfatase activity
At1D1460_44380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
At1D1460_44390	COG3842	ATPase activity
At1D1460_44400	COG0165	Argininosuccinate lyase
At1D1460_44410	COG0395	ABC-type sugar transport system, permease component
At1D1460_44420	COG1175	transmembrane transport
At1D1460_44430	COG2182	Extracellular solute-binding protein
At1D1460_44440	COG1940	carbohydrate kinase activity
At1D1460_44490	COG1486	melibiose metabolic process
At1D1460_44500	COG0747	negative chemotaxis
At1D1460_44510	COG0601	transmembrane transport
At1D1460_44520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_44530	COG4172	Belongs to the ABC transporter superfamily
At1D1460_44540	COG1486	melibiose metabolic process
At1D1460_44550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_44560	COG1129	ABC transporter
At1D1460_44560	COG0842	Transport permease protein
At1D1460_44570	COG0842	Transport permease protein
At1D1460_44610	COG0784	Response regulator, receiver
At1D1460_44630	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
At1D1460_44650	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_44660	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
At1D1460_44700	COG0765	amino acid transport
At1D1460_44720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_44740	COG3938	Belongs to the proline racemase family
At1D1460_44770	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_44790	COG0765	amino acid transport
At1D1460_44810	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
At1D1460_44870	COG3383	formate dehydrogenase (NAD+) activity
At1D1460_44900	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_44920	COG2186	Transcriptional regulator
At1D1460_44930	COG0747	negative chemotaxis
At1D1460_44940	COG0601	transmembrane transport
At1D1460_44950	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_44960	COG4172	Belongs to the ABC transporter superfamily
At1D1460_44970	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_44990	COG2186	Transcriptional regulator
At1D1460_45000	COG0747	negative chemotaxis
At1D1460_45010	COG0601	transmembrane transport
At1D1460_45030	COG0405	Gamma-glutamyltransferase
At1D1460_45050	COG0483	inositol monophosphate 1-phosphatase activity
At1D1460_45070	COG3842	ATPase activity
At1D1460_45120	COG3237	CsbD-like
At1D1460_45140	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
At1D1460_45150	COG3181	Tripartite tricarboxylate transporter family receptor
At1D1460_45160	COG1132	(ABC) transporter
At1D1460_45180	COG0488	(ABC) transporter
At1D1460_45230	COG1049	propionate catabolic process, 2-methylcitrate cycle
At1D1460_45240	COG0110	maltose O-acetyltransferase activity
At1D1460_45260	COG1063	alcohol dehydrogenase
At1D1460_45270	COG3284	Transcriptional regulator
At1D1460_45310	COG1129	ABC transporter
At1D1460_45320	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_45330	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_45340	COG1082	Xylose isomerase domain protein TIM barrel
At1D1460_45350	COG0572	uridine kinase
At1D1460_45360	COG1082	Xylose isomerase domain protein TIM barrel
At1D1460_45380	COG1126	abc transporter atp-binding protein
At1D1460_45390	COG0765	amino acid transport
At1D1460_45400	COG0765	amino acid transport
At1D1460_45410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_45420	COG3608	succinylglutamate desuccinylase aspartoacylase
At1D1460_45430	COG0006	proline dipeptidase activity
At1D1460_45440	COG2423	ornithine cyclodeaminase activity
At1D1460_45450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
At1D1460_45460	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
At1D1460_45470	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
At1D1460_45480	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_45490	COG1522	sequence-specific DNA binding
At1D1460_45560	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
At1D1460_45570	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_45580	COG1126	abc transporter atp-binding protein
At1D1460_45590	COG0765	amino acid transport
At1D1460_45610	COG0583	DNA-binding transcription factor activity
At1D1460_45620	COG0596	Alpha beta hydrolase
At1D1460_45660	COG4178	(ABC) transporter
At1D1460_45680	COG4297	protein containing double-stranded beta helix domain
At1D1460_45720	COG0640	Transcriptional regulator
At1D1460_45760	COG1278	Cold shock
At1D1460_45790	COG0753	catalase activity
At1D1460_45880	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
At1D1460_45890	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
At1D1460_45930	COG0625	glutathione transferase activity
At1D1460_45940	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_45990	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_46010	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
At1D1460_46030	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_46050	COG1653	transport
At1D1460_46060	COG0395	ABC-type sugar transport system, permease component
At1D1460_46070	COG4209	transmembrane transport
At1D1460_46080	COG3842	ATPase activity
At1D1460_46090	COG1802	Transcriptional regulator
At1D1460_46140	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_46190	COG3706	GGDEF domain
At1D1460_46230	COG2801	Transposase and inactivated derivatives
At1D1460_46280	COG0668	transmembrane transport
At1D1460_46330	COG1902	pentaerythritol trinitrate reductase activity
At1D1460_46430	COG0828	Belongs to the bacterial ribosomal protein bS21 family
At1D1460_46480	COG4372	Transposase
At1D1460_46490	COG3436	PFAM IS66 Orf2 family protein
At1D1460_46530	COG2826	transposase and inactivated derivatives, IS30 family
At1D1460_46560	COG2267	carboxylic ester hydrolase activity
At1D1460_46620	COG2161	toxin-antitoxin pair type II binding
At1D1460_46650	COG1192	Involved in chromosome partitioning
At1D1460_46660	COG1475	DNA binding
At1D1460_46670	COG0640	Transcriptional regulator
At1D1460_46690	COG0583	DNA-binding transcription factor activity
At1D1460_46700	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
At1D1460_46780	COG1126	abc transporter atp-binding protein
At1D1460_46790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_46820	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
At1D1460_46900	COG0210	DNA helicase
At1D1460_47010	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
At1D1460_47010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
At1D1460_47160	COG1216	Glycosyl transferase, family 2
At1D1460_47200	COG3916	Acyl-homoserine-lactone synthase
At1D1460_47210	COG2197	response regulator
At1D1460_47220	COG1262	PFAM Formylglycine-generating sulfatase enzyme
At1D1460_47230	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
At1D1460_47270	COG0840	transmembrane signaling receptor activity
At1D1460_47290	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
At1D1460_47340	COG3842	ATPase activity
At1D1460_47360	COG2390	Transcriptional regulator
At1D1460_47410	COG3177	Filamentation induced by cAMP protein fic
At1D1460_47430	COG4644	lycopene metabolic process
At1D1460_47540	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_47560	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_47580	COG1733	regulation of RNA biosynthetic process
At1D1460_47590	COG1733	regulation of RNA biosynthetic process
At1D1460_47660	COG3547	Transposase (IS116 IS110 IS902 family)
At1D1460_47700	COG3620	sequence-specific DNA binding
At1D1460_47710	COG3550	peptidyl-serine autophosphorylation
At1D1460_47810	COG0459	protein refolding
At1D1460_47820	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
At1D1460_47870	COG3158	transport of potassium into the cell
At1D1460_47900	COG0583	DNA-binding transcription factor activity
At1D1460_47910	COG0667	Aldo Keto reductase
At1D1460_47940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_47950	COG0601	transmembrane transport
At1D1460_47970	COG1802	Transcriptional regulator
At1D1460_47990	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_48000	COG4691	Plasmid stability protein
At1D1460_48010	COG1487	ribonuclease activity
At1D1460_48020	COG2186	Transcriptional regulator
At1D1460_48040	COG1126	abc transporter atp-binding protein
At1D1460_48070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
At1D1460_48110	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_48200	COG2207	Transcriptional regulator
At1D1460_48210	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
At1D1460_48230	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
At1D1460_48240	COG1012	belongs to the aldehyde dehydrogenase family
At1D1460_48250	COG1522	sequence-specific DNA binding
At1D1460_48260	COG0747	negative chemotaxis
At1D1460_48270	COG0601	transmembrane transport
At1D1460_48290	COG4172	Belongs to the ABC transporter superfamily
At1D1460_48310	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
At1D1460_48380	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
At1D1460_48380	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
At1D1460_48400	COG0745	RESPONSE REGULATOR receiver
At1D1460_48410	COG0642	Histidine kinase
At1D1460_48420	COG1376	ErfK ybiS ycfS ynhG family protein
At1D1460_48460	COG1309	transcriptional regulator
At1D1460_48490	COG2020	methyltransferase activity
At1D1460_48510	COG5489	Protein of unknown function (DUF736)
At1D1460_48530	COG5489	Protein of unknown function (DUF736)
At1D1460_48540	COG4974	Belongs to the 'phage' integrase family
At1D1460_48550	COG0582	viral genome integration into host DNA
At1D1460_48560	COG4974	Belongs to the 'phage' integrase family
At1D1460_48570	COG5489	Protein of unknown function (DUF736)
At1D1460_48610	COG3838	Conjugal transfer protein Trbc
At1D1460_48620	COG3702	type iv secretory pathway
At1D1460_48630	COG3451	type IV secretory pathway VirB4
At1D1460_48660	COG3704	protein secretion by the type IV secretion system
At1D1460_48680	COG3736	Type IV secretory pathway, component VirB8
At1D1460_48690	COG3504	Conjugal transfer protein
At1D1460_48700	COG2948	multi-organism process
At1D1460_48710	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
At1D1460_48720	COG0776	regulation of translation
At1D1460_48740	COG3505	Type IV secretory pathway VirD4
At1D1460_48780	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
At1D1460_48800	COG0583	DNA-binding transcription factor activity
At1D1460_48820	COG1609	Transcriptional regulator
At1D1460_48890	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
At1D1460_48930	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
At1D1460_48990	COG3734	2-keto-3-deoxy-galactonokinase
At1D1460_49000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
At1D1460_49010	COG4948	Mandelate Racemase Muconate Lactonizing
At1D1460_49030	COG1175	transmembrane transport
At1D1460_49040	COG0395	ABC-type sugar transport system, permease component
At1D1460_49050	COG3842	ATPase activity
At1D1460_49060	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
At1D1460_49070	COG1414	Transcriptional regulator
At1D1460_49080	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_49090	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
At1D1460_49120	COG3920	Histidine kinase
At1D1460_49180	COG2354	Protein conserved in bacteria
At1D1460_49190	COG0598	Magnesium transport protein CorA
At1D1460_49240	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
At1D1460_49250	COG2826	transposase and inactivated derivatives, IS30 family
At1D1460_49270	COG3177	Filamentation induced by cAMP protein fic
At1D1460_49300	COG0071	Belongs to the small heat shock protein (HSP20) family
At1D1460_49330	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
At1D1460_49340	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
At1D1460_49370	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
At1D1460_49390	COG1247	-acetyltransferase
At1D1460_49450	COG0583	DNA-binding transcription factor activity
At1D1460_49470	COG0028	Belongs to the TPP enzyme family
At1D1460_49550	COG1573	uracil-dna glycosylase
At1D1460_49670	COG3685	Protein conserved in bacteria
At1D1460_49680	COG0753	catalase activity
At1D1460_49770	COG0798	PFAM Bile acid sodium symporter
At1D1460_49800	COG0640	Transcriptional regulator
At1D1460_49830	COG1942	4-Oxalocrotonate Tautomerase
At1D1460_49850	COG0655	NAD(P)H dehydrogenase (quinone) activity
At1D1460_49880	COG4585	Histidine kinase
At1D1460_49890	COG2197	response regulator
At1D1460_49930	COG0583	DNA-binding transcription factor activity
At1D1460_49940	COG1741	Belongs to the pirin family
At1D1460_49970	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_49990	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_50010	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_50020	COG4221	oxidoreductase activity
At1D1460_50060	COG4221	oxidoreductase activity
At1D1460_50290	COG1929	Belongs to the glycerate kinase type-1 family
At1D1460_50330	COG0300	oxidoreductase activity
At1D1460_50350	COG0583	DNA-binding transcription factor activity
At1D1460_50380	COG2207	Transcriptional regulator
At1D1460_50390	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_50410	COG1335	isochorismatase
At1D1460_50430	COG0667	Aldo Keto reductase
At1D1460_50440	COG2267	carboxylic ester hydrolase activity
At1D1460_50460	COG0604	alcohol dehydrogenase
At1D1460_50470	COG1902	pentaerythritol trinitrate reductase activity
At1D1460_50480	COG0300	oxidoreductase activity
At1D1460_50490	COG1309	transcriptional regulator
At1D1460_50500	COG2207	Transcriptional regulator
At1D1460_50550	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
At1D1460_50570	COG1846	Transcriptional regulator
At1D1460_50580	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_50600	COG0583	DNA-binding transcription factor activity
At1D1460_50700	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
At1D1460_50710	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_50730	COG0395	ABC-type sugar transport system, permease component
At1D1460_50780	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_50790	COG1349	DNA-binding transcription factor activity
At1D1460_50800	COG1069	ribulokinase activity
At1D1460_50840	COG1940	carbohydrate kinase activity
At1D1460_50840	COG1846	Transcriptional regulator
At1D1460_50970	COG1278	Cold shock
At1D1460_51000	COG1522	sequence-specific DNA binding
At1D1460_51030	COG2814	Major facilitator Superfamily
At1D1460_51060	COG1846	Transcriptional regulator
At1D1460_51070	COG2807	transmembrane transport
At1D1460_51080	COG2211	Major facilitator Superfamily
At1D1460_51110	COG3547	Transposase (IS116 IS110 IS902 family)
At1D1460_51140	COG2814	Major facilitator Superfamily
At1D1460_51150	COG1846	Transcriptional regulator
At1D1460_51210	COG3335	DDE superfamily endonuclease
At1D1460_51220	COG3415	Transposase
At1D1460_51280	COG5002	protein histidine kinase activity
At1D1460_51390	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
At1D1460_51400	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_51410	COG1129	ABC transporter
At1D1460_51420	COG1879	ABC-type sugar transport system periplasmic component
At1D1460_51430	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_51440	COG3959	Transketolase, thiamine diphosphate binding domain
At1D1460_51450	COG3958	Transketolase
At1D1460_51460	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
At1D1460_51470	COG2390	Transcriptional regulator
At1D1460_51490	COG4977	sequence-specific DNA binding
At1D1460_51510	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
At1D1460_51550	COG3547	Transposase (IS116 IS110 IS902 family)
At1D1460_51590	COG5001	Diguanylate cyclase
At1D1460_51590	COG3300	MHYT domain
At1D1460_51630	COG2084	Dehydrogenase
At1D1460_51640	COG3622	Belongs to the hyi family
At1D1460_51660	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_51670	COG0601	transmembrane transport
At1D1460_51690	COG0747	negative chemotaxis
At1D1460_51700	COG1609	Transcriptional regulator
At1D1460_51710	COG3239	Fatty acid desaturase
At1D1460_51720	COG3706	GGDEF domain
At1D1460_51760	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
At1D1460_51770	COG2202	Pas domain
At1D1460_51770	COG3920	Histidine kinase
At1D1460_51790	COG0577	efflux transmembrane transporter activity
At1D1460_51790	COG1136	(ABC) transporter
At1D1460_51800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
At1D1460_51820	COG0745	RESPONSE REGULATOR receiver
At1D1460_51920	COG0583	DNA-binding transcription factor activity
At1D1460_51960	COG0583	DNA-binding transcription factor activity
At1D1460_51990	COG1192	Involved in chromosome partitioning
At1D1460_52000	COG1475	DNA binding
At1D1460_52010	COG0640	Transcriptional regulator
At1D1460_52020	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
At1D1460_52110	COG0583	DNA-binding transcription factor activity
At1D1460_52140	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_52150	COG1116	anion transmembrane transporter activity
At1D1460_52160	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_52200	COG1028	Short-chain dehydrogenase reductase Sdr
At1D1460_52210	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
At1D1460_52260	COG1172	Belongs to the binding-protein-dependent transport system permease family
At1D1460_52270	COG1129	ABC transporter
At1D1460_52320	COG4172	Belongs to the ABC transporter superfamily
At1D1460_52340	COG0601	transmembrane transport
At1D1460_52360	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
At1D1460_52380	COG0583	DNA-binding transcription factor activity
At1D1460_52410	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
At1D1460_52440	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
At1D1460_52450	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
At1D1460_52510	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
At1D1460_52620	COG1475	DNA binding
At1D1460_52660	COG2824	Alkylphosphonate utilization operon protein PhnA
At1D1460_52700	COG5489	Protein of unknown function (DUF736)
At1D1460_52750	COG0494	nUDIX hydrolase
At1D1460_52760	COG5489	Protein of unknown function (DUF736)
At1D1460_52940	COG1283	sodium-dependent phosphate transmembrane transporter activity
At1D1460_52960	COG0747	negative chemotaxis
At1D1460_52990	COG0601	transmembrane transport
At1D1460_53000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
At1D1460_53010	COG0584	glycerophosphoryl diester phosphodiesterase
At1D1460_53020	COG0483	inositol monophosphate 1-phosphatase activity
At1D1460_53080	COG3547	Transposase (IS116 IS110 IS902 family)
At1D1460_53140	COG3161	chorismate lyase activity
At1D1460_53680	COG0145	ligase activity
At1D1460_53700	COG0583	DNA-binding transcription factor activity
At1D1460_53800	COG3701	Conjugal transfer protein
At1D1460_53810	COG3846	protein secretion by the type IV secretion system
At1D1460_53830	COG5314	conjugation
At1D1460_53840	COG3451	type IV secretory pathway VirB4
At1D1460_53870	COG4962	Type ii secretion system protein e