locus-tag class description At1D1609_00010 PF03618 Kinase/pyrophosphorylase At1D1609_00020 PF02545 Maf-like protein At1D1609_00030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At1D1609_00030 PF08501 Shikimate dehydrogenase substrate binding domain At1D1609_00030 PF01488 Shikimate / quinate 5-dehydrogenase At1D1609_00040 PF01121 Dephospho-CoA kinase At1D1609_00050 PF00929 Exonuclease At1D1609_00060 PF02556 Preprotein translocase subunit SecB At1D1609_00070 PF04186 FxsA cytoplasmic membrane protein At1D1609_00090 PF03562 MltA specific insert domain At1D1609_00090 PF06725 3D domain At1D1609_00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_00120 PF01751 Toprim domain At1D1609_00120 PF00986 DNA gyrase B subunit, carboxyl terminus At1D1609_00120 PF00204 DNA gyrase B At1D1609_00140 PF01557 Fumarylacetoacetate (FAA) hydrolase family At1D1609_00170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase At1D1609_00180 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_00190 PF00290 Tryptophan synthase alpha chain At1D1609_00200 PF01039 Carboxyl transferase domain At1D1609_00210 PF08245 Mur ligase middle domain At1D1609_00210 PF02875 Mur ligase family, glutamate ligase domain At1D1609_00220 PF00085 Thioredoxin At1D1609_00230 PF13361 UvrD-like helicase C-terminal domain At1D1609_00230 PF00580 UvrD/REP helicase N-terminal domain At1D1609_00230 PF12705 PD-(D/E)XK nuclease superfamily At1D1609_00250 PF12804 MobA-like NTP transferase domain At1D1609_00260 PF01636 Phosphotransferase enzyme family At1D1609_00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_00270 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_00280 PF05221 S-adenosyl-L-homocysteine hydrolase At1D1609_00280 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain At1D1609_00290 PF00381 PTS HPr component phosphorylation site At1D1609_00300 PF03830 PTS system sorbose subfamily IIB component At1D1609_00300 PF03610 PTS system fructose IIA component At1D1609_00310 PF07475 HPr Serine kinase C-terminal domain At1D1609_00310 PF02603 HPr Serine kinase N terminus At1D1609_00320 PF13756 Stimulus-sensing domain At1D1609_00320 PF13755 Sensor N-terminal transmembrane domain At1D1609_00320 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_00320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_00320 PF00672 HAMP domain At1D1609_00330 PF00486 Transcriptional regulatory protein, C terminal At1D1609_00330 PF00072 Response regulator receiver domain At1D1609_00340 PF01293 Phosphoenolpyruvate carboxykinase At1D1609_00350 PF00472 RF-1 domain At1D1609_00360 PF00485 Phosphoribulokinase / Uridine kinase family At1D1609_00370 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase At1D1609_00380 PF00977 Histidine biosynthesis protein At1D1609_00390 PF00977 Histidine biosynthesis protein At1D1609_00400 PF00117 Glutamine amidotransferase class-I At1D1609_00420 PF00475 Imidazoleglycerol-phosphate dehydratase At1D1609_00430 PF00227 Proteasome subunit At1D1609_00440 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_00440 PF07724 AAA domain (Cdc48 subfamily) At1D1609_00440 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_00460 PF01274 Malate synthase At1D1609_00490 PF00072 Response regulator receiver domain At1D1609_00500 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_00510 PF00271 Helicase conserved C-terminal domain At1D1609_00510 PF04408 Helicase associated domain (HA2) At1D1609_00510 PF00270 DEAD/DEAH box helicase At1D1609_00510 PF08482 ATP-dependent helicase C-terminal At1D1609_00520 PF09382 RQC domain At1D1609_00520 PF00270 DEAD/DEAH box helicase At1D1609_00520 PF00271 Helicase conserved C-terminal domain At1D1609_00520 PF16124 RecQ zinc-binding At1D1609_00520 PF00570 HRDC domain At1D1609_00530 PF00480 ROK family At1D1609_00540 PF13407 Periplasmic binding protein domain At1D1609_00550 PF02653 Branched-chain amino acid transport system / permease component At1D1609_00560 PF00005 ABC transporter At1D1609_00570 PF00485 Phosphoribulokinase / Uridine kinase family At1D1609_00580 PF00462 Glutaredoxin At1D1609_00590 PF07972 NrdI Flavodoxin like At1D1609_00600 PF02867 Ribonucleotide reductase, barrel domain At1D1609_00600 PF00317 Ribonucleotide reductase, all-alpha domain At1D1609_00600 PF08343 Ribonucleotide reductase N-terminal At1D1609_00610 PF00268 Ribonucleotide reductase, small chain At1D1609_00630 PF02463 RecF/RecN/SMC N terminal domain At1D1609_00640 PF00899 ThiF family At1D1609_00640 PF00581 Rhodanese-like domain At1D1609_00660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_00660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_00680 PF00294 pfkB family carbohydrate kinase At1D1609_00700 PF08468 Methyltransferase small domain N-terminal At1D1609_00700 PF05175 Methyltransferase small domain At1D1609_00710 PF01138 3' exoribonuclease family, domain 1 At1D1609_00710 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain At1D1609_00710 PF00575 S1 RNA binding domain At1D1609_00710 PF03725 3' exoribonuclease family, domain 2 At1D1609_00710 PF00013 KH domain At1D1609_00720 PF00312 Ribosomal protein S15 At1D1609_00730 PF16198 tRNA pseudouridylate synthase B C-terminal domain At1D1609_00730 PF01509 TruB family pseudouridylate synthase (N terminal domain) At1D1609_00730 PF09157 Pseudouridine synthase II TruB, C-terminal At1D1609_00740 PF02033 Ribosome-binding factor A At1D1609_00750 PF00009 Elongation factor Tu GTP binding domain At1D1609_00750 PF03144 Elongation factor Tu domain 2 At1D1609_00750 PF11987 Translation-initiation factor 2 At1D1609_00750 PF08364 Bacterial translation initiation factor IF-2 associated region At1D1609_00750 PF04760 Translation initiation factor IF-2, N-terminal region At1D1609_00770 PF13184 NusA-like KH domain At1D1609_00770 PF00575 S1 RNA binding domain At1D1609_00770 PF08529 NusA N-terminal domain At1D1609_00780 PF17384 RimP C-terminal SH3 domain At1D1609_00780 PF02576 RimP N-terminal domain At1D1609_00790 PF05977 Transmembrane secretion effector At1D1609_00800 PF01609 Transposase DDE domain At1D1609_00810 PF13406 Transglycosylase SLT domain At1D1609_00820 PF13662 Toprim domain At1D1609_00820 PF02132 RecR protein At1D1609_00840 PF02575 YbaB/EbfC DNA-binding family At1D1609_00850 PF12169 DNA polymerase III subunits gamma and tau domain III At1D1609_00850 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding At1D1609_00850 PF12170 DNA polymerase III tau subunit V interacting with alpha At1D1609_00870 PF00293 NUDIX domain At1D1609_00870 PF09297 NADH pyrophosphatase zinc ribbon domain At1D1609_00870 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain At1D1609_00880 PF01817 Chorismate mutase type II At1D1609_00880 PF00800 Prephenate dehydratase At1D1609_00890 PF02348 Cytidylyltransferase At1D1609_00900 PF00034 Cytochrome c At1D1609_00910 PF02397 Bacterial sugar transferase At1D1609_00920 PF00912 Transglycosylase At1D1609_00920 PF00905 Penicillin binding protein transpeptidase domain At1D1609_00930 PF04073 Aminoacyl-tRNA editing domain At1D1609_00940 PF00313 'Cold-shock' DNA-binding domain At1D1609_00950 PF07687 Peptidase dimerisation domain At1D1609_00950 PF01546 Peptidase family M20/M25/M40 At1D1609_00960 PF01047 MarR family At1D1609_00970 PF01367 5'-3' exonuclease, C-terminal SAM fold At1D1609_00970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain At1D1609_00970 PF00476 DNA polymerase family A At1D1609_00970 PF01612 3'-5' exonuclease At1D1609_00980 PF01783 Ribosomal L32p protein family At1D1609_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_00990 PF02743 Cache domain At1D1609_00990 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_01000 PF02954 Bacterial regulatory protein, Fis family At1D1609_01000 PF00072 Response regulator receiver domain At1D1609_01000 PF00158 Sigma-54 interaction domain At1D1609_01010 PF03401 Tripartite tricarboxylate transporter family receptor At1D1609_01020 PF07331 Tripartite tricarboxylate transporter TctB family At1D1609_01030 PF01970 Tripartite tricarboxylate transporter TctA family At1D1609_01040 PF04102 SlyX At1D1609_01060 PF00684 DnaJ central domain At1D1609_01060 PF01556 DnaJ C terminal domain At1D1609_01060 PF00226 DnaJ domain At1D1609_01070 PF00012 Hsp70 protein At1D1609_01090 PF01625 Peptide methionine sulfoxide reductase At1D1609_01140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At1D1609_01150 PF01048 Phosphorylase superfamily At1D1609_01160 PF01791 DeoC/LacD family aldolase At1D1609_01170 PF00591 Glycosyl transferase family, a/b domain At1D1609_01170 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain At1D1609_01170 PF02885 Glycosyl transferase family, helical bundle domain At1D1609_01200 PF00962 Adenosine/AMP deaminase At1D1609_01210 PF01676 Metalloenzyme superfamily At1D1609_01230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV At1D1609_01240 PF00510 Cytochrome c oxidase subunit III At1D1609_01250 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1609_01260 PF06481 COX Aromatic Rich Motif At1D1609_01260 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At1D1609_01270 PF00083 Sugar (and other) transporter At1D1609_01270 PF07690 Major Facilitator Superfamily At1D1609_01280 PF04898 Glutamate synthase central domain At1D1609_01280 PF01493 GXGXG motif At1D1609_01280 PF01645 Conserved region in glutamate synthase At1D1609_01280 PF00310 Glutamine amidotransferases class-II At1D1609_01290 PF00667 FAD binding domain At1D1609_01290 PF00175 Oxidoreductase NAD-binding domain At1D1609_01290 PF00258 Flavodoxin At1D1609_01330 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_01330 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_01340 PF07977 FabA-like domain At1D1609_01360 PF03458 UPF0126 domain At1D1609_01380 PF06912 Protein of unknown function (DUF1275) At1D1609_01400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01410 PF00005 ABC transporter At1D1609_01420 PF00392 Bacterial regulatory proteins, gntR family At1D1609_01420 PF07702 UTRA domain At1D1609_01430 PF01618 MotA/TolQ/ExbB proton channel family At1D1609_01440 PF02472 Biopolymer transport protein ExbD/TolR At1D1609_01460 PF02615 Malate/L-lactate dehydrogenase At1D1609_01490 PF00625 Guanylate kinase At1D1609_01500 PF07969 Amidohydrolase family At1D1609_01510 PF06299 Protein of unknown function (DUF1045) At1D1609_01520 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01530 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01550 PF00005 ABC transporter At1D1609_01570 PF00005 ABC transporter At1D1609_01580 PF00005 ABC transporter At1D1609_01590 PF06007 Phosphonate metabolism protein PhnJ At1D1609_01610 PF05861 Bacterial phosphonate metabolism protein (PhnI) At1D1609_01620 PF05845 Bacterial phosphonate metabolism protein (PhnH) At1D1609_01630 PF06754 Phosphonate metabolism protein PhnG At1D1609_01640 PF07702 UTRA domain At1D1609_01640 PF00392 Bacterial regulatory proteins, gntR family At1D1609_01650 PF05173 Dihydrodipicolinate reductase, C-terminus At1D1609_01650 PF01113 Dihydrodipicolinate reductase, N-terminus At1D1609_01660 PF02685 Glucokinase At1D1609_01670 PF02142 MGS-like domain At1D1609_01680 PF03411 Penicillin-insensitive murein endopeptidase At1D1609_01690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_01700 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01710 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_01710 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_01720 PF00005 ABC transporter At1D1609_01730 PF01266 FAD dependent oxidoreductase At1D1609_01740 PF00120 Glutamine synthetase, catalytic domain At1D1609_01750 PF01266 FAD dependent oxidoreductase At1D1609_01770 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01780 PF00005 ABC transporter At1D1609_01790 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_01800 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1609_01820 PF02082 Transcriptional regulator At1D1609_01830 PF13416 Bacterial extracellular solute-binding protein At1D1609_01840 PF00171 Aldehyde dehydrogenase family At1D1609_01850 PF03466 LysR substrate binding domain At1D1609_01850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_01860 PF00892 EamA-like transporter family At1D1609_01890 PF00877 NlpC/P60 family At1D1609_01910 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family At1D1609_01910 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain At1D1609_01920 PF00883 Cytosol aminopeptidase family, catalytic domain At1D1609_01920 PF02789 Cytosol aminopeptidase family, N-terminal domain At1D1609_01960 PF00437 Type II/IV secretion system protein At1D1609_01990 PF13629 Pilus formation protein N terminal region At1D1609_01990 PF00263 Bacterial type II and III secretion system protein At1D1609_01990 PF04972 BON domain At1D1609_02060 PF00117 Glutamine amidotransferase class-I At1D1609_02070 PF07411 Domain of unknown function (DUF1508) At1D1609_02080 PF01183 Glycosyl hydrolases family 25 At1D1609_02090 PF00892 EamA-like transporter family At1D1609_02100 PF00155 Aminotransferase class I and II At1D1609_02100 PF00392 Bacterial regulatory proteins, gntR family At1D1609_02160 PF00009 Elongation factor Tu GTP binding domain At1D1609_02160 PF00679 Elongation factor G C-terminus At1D1609_02160 PF06421 GTP-binding protein LepA C-terminus At1D1609_02160 PF03144 Elongation factor Tu domain 2 At1D1609_02170 PF00795 Carbon-nitrogen hydrolase At1D1609_02230 PF12833 Helix-turn-helix domain At1D1609_02230 PF02311 AraC-like ligand binding domain At1D1609_02240 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_02290 PF00707 Translation initiation factor IF-3, C-terminal domain At1D1609_02290 PF05198 Translation initiation factor IF-3, N-terminal domain At1D1609_02300 PF01632 Ribosomal protein L35 At1D1609_02310 PF00453 Ribosomal protein L20 At1D1609_02330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain At1D1609_02330 PF01409 tRNA synthetases class II core domain (F) At1D1609_02340 PF03483 B3/4 domain At1D1609_02340 PF03484 tRNA synthetase B5 domain At1D1609_02340 PF01588 Putative tRNA binding domain At1D1609_02340 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain At1D1609_02340 PF03147 Ferredoxin-fold anticodon binding domain At1D1609_02350 PF00248 Aldo/keto reductase family At1D1609_02360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_02360 PF03466 LysR substrate binding domain At1D1609_02390 PF12833 Helix-turn-helix domain At1D1609_02390 PF01965 DJ-1/PfpI family At1D1609_02410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_02410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_02440 PF13742 OB-fold nucleic acid binding domain At1D1609_02440 PF02601 Exonuclease VII, large subunit At1D1609_02450 PF13378 Enolase C-terminal domain-like At1D1609_02450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_02460 PF07729 FCD domain At1D1609_02460 PF00392 Bacterial regulatory proteins, gntR family At1D1609_02470 PF01047 MarR family At1D1609_02480 PF00892 EamA-like transporter family At1D1609_02490 PF02073 Thermophilic metalloprotease (M29) At1D1609_02500 PF04073 Aminoacyl-tRNA editing domain At1D1609_02510 PF03960 ArsC family At1D1609_02540 PF00440 Bacterial regulatory proteins, tetR family At1D1609_02570 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_02570 PF00107 Zinc-binding dehydrogenase At1D1609_02600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_02620 PF00107 Zinc-binding dehydrogenase At1D1609_02620 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_02640 PF01026 TatD related DNase At1D1609_02680 PF13361 UvrD-like helicase C-terminal domain At1D1609_02680 PF00580 UvrD/REP helicase N-terminal domain At1D1609_02680 PF12705 PD-(D/E)XK nuclease superfamily At1D1609_02720 PF18728 AbiV At1D1609_02870 PF05284 Protein of unknown function (DUF736) At1D1609_02930 PF13614 AAA domain At1D1609_03000 PF02534 Type IV secretory system Conjugative DNA transfer At1D1609_03020 PF00437 Type II/IV secretion system protein At1D1609_03050 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1609_03080 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1609_03110 PF03743 Bacterial conjugation TrbI-like protein At1D1609_03130 PF06719 AraC-type transcriptional regulator N-terminus At1D1609_03130 PF12833 Helix-turn-helix domain At1D1609_03150 PF00857 Isochorismatase family At1D1609_03180 PF07859 alpha/beta hydrolase fold At1D1609_03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_03190 PF03466 LysR substrate binding domain At1D1609_03220 PF00958 GMP synthase C terminal domain At1D1609_03220 PF00117 Glutamine amidotransferase class-I At1D1609_03250 PF03073 TspO/MBR family At1D1609_03300 PF01189 16S rRNA methyltransferase RsmB/F At1D1609_03300 PF01029 NusB family At1D1609_03310 PF03330 Lytic transglycolase At1D1609_03330 PF08331 Domain of unknown function (DUF1730) At1D1609_03340 PF13417 Glutathione S-transferase, N-terminal domain At1D1609_03340 PF00043 Glutathione S-transferase, C-terminal domain At1D1609_03350 PF02673 Bacitracin resistance protein BacA At1D1609_03380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family At1D1609_03400 PF13649 Methyltransferase domain At1D1609_03410 PF02768 DNA polymerase III beta subunit, C-terminal domain At1D1609_03410 PF00712 DNA polymerase III beta subunit, N-terminal domain At1D1609_03410 PF02767 DNA polymerase III beta subunit, central domain At1D1609_03420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_03440 PF14602 Hexapeptide repeat of succinyl-transferase At1D1609_03440 PF12464 Maltose acetyltransferase At1D1609_03450 PF13416 Bacterial extracellular solute-binding protein At1D1609_03460 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_03470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_03480 PF00005 ABC transporter At1D1609_03500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At1D1609_03500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At1D1609_03510 PF01078 Magnesium chelatase, subunit ChlI At1D1609_03510 PF13335 Magnesium chelatase, subunit ChlI C-terminal At1D1609_03520 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_03530 PF01810 LysE type translocator At1D1609_03540 PF00692 dUTPase At1D1609_03550 PF16658 Class II release factor RF3, C-terminal domain At1D1609_03550 PF03144 Elongation factor Tu domain 2 At1D1609_03550 PF00009 Elongation factor Tu GTP binding domain At1D1609_03560 PF04127 DNA / pantothenate metabolism flavoprotein At1D1609_03560 PF02441 Flavoprotein At1D1609_03590 PF03109 ABC1 family At1D1609_03600 PF01209 ubiE/COQ5 methyltransferase family At1D1609_03610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain At1D1609_03610 PF06827 Zinc finger found in FPG and IleRS At1D1609_03610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain At1D1609_03620 PF00378 Enoyl-CoA hydratase/isomerase At1D1609_03630 PF01649 Ribosomal protein S20 At1D1609_03640 PF00308 Bacterial dnaA protein At1D1609_03640 PF08299 Bacterial dnaA protein helix-turn-helix At1D1609_03640 PF11638 DnaA N-terminal domain At1D1609_03650 PF06969 HemN C-terminal domain At1D1609_03650 PF04055 Radical SAM superfamily At1D1609_03660 PF01725 Ham1 family At1D1609_03670 PF01138 3' exoribonuclease family, domain 1 At1D1609_03670 PF03725 3' exoribonuclease family, domain 2 At1D1609_03680 PF01628 HrcA protein C terminal domain At1D1609_03690 PF01025 GrpE At1D1609_03700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 At1D1609_03710 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus At1D1609_03710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein At1D1609_03720 PF04552 Sigma-54, DNA binding domain At1D1609_03720 PF00309 Sigma-54 factor, Activator interacting domain (AID) At1D1609_03720 PF04963 Sigma-54 factor, core binding domain At1D1609_03730 PF00005 ABC transporter At1D1609_03740 PF03968 OstA-like protein At1D1609_03760 PF01343 Peptidase family S49 At1D1609_03770 PF00216 Bacterial DNA-binding protein At1D1609_03790 PF01170 Putative RNA methylase family UPF0020 At1D1609_03790 PF02926 THUMP domain At1D1609_03790 PF10672 S-adenosylmethionine-dependent methyltransferase At1D1609_03800 PF00588 SpoU rRNA Methylase family At1D1609_03800 PF08032 RNA 2'-O ribose methyltransferase substrate binding At1D1609_03810 PF01252 Signal peptidase (SPase) II At1D1609_03820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At1D1609_03820 PF00072 Response regulator receiver domain At1D1609_03820 PF01627 Hpt domain At1D1609_03820 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_03820 PF00672 HAMP domain At1D1609_03840 PF01624 MutS domain I At1D1609_03840 PF05188 MutS domain II At1D1609_03840 PF00488 MutS domain V At1D1609_03840 PF05190 MutS family domain IV At1D1609_03840 PF05192 MutS domain III At1D1609_03850 PF01909 Nucleotidyltransferase domain At1D1609_03850 PF01966 HD domain At1D1609_03850 PF08335 GlnD PII-uridylyltransferase At1D1609_03850 PF01842 ACT domain At1D1609_03860 PF03023 Lipid II flippase MurJ At1D1609_03880 PF00579 tRNA synthetases class I (W and Y) At1D1609_03900 PF01106 NifU-like domain At1D1609_03910 PF00814 Glycoprotease family At1D1609_03920 PF00583 Acetyltransferase (GNAT) family At1D1609_03920 PF13508 Acetyltransferase (GNAT) domain At1D1609_03930 PF01475 Ferric uptake regulator family At1D1609_03940 PF01553 Acyltransferase At1D1609_03950 PF00919 Uncharacterized protein family UPF0004 At1D1609_03950 PF04055 Radical SAM superfamily At1D1609_03950 PF01938 TRAM domain At1D1609_03960 PF02562 PhoH-like protein At1D1609_03970 PF02130 Uncharacterized protein family UPF0054 At1D1609_03980 PF00571 CBS domain At1D1609_03980 PF03471 Transporter associated domain At1D1609_03990 PF00795 Carbon-nitrogen hydrolase At1D1609_04000 PF01381 Helix-turn-helix At1D1609_04010 PF00438 S-adenosylmethionine synthetase, N-terminal domain At1D1609_04010 PF02772 S-adenosylmethionine synthetase, central domain At1D1609_04010 PF02773 S-adenosylmethionine synthetase, C-terminal domain At1D1609_04020 PF02390 Putative methyltransferase At1D1609_04030 PF00294 pfkB family carbohydrate kinase At1D1609_04040 PF02646 RmuC family At1D1609_04050 PF01327 Polypeptide deformylase At1D1609_04060 PF00551 Formyl transferase At1D1609_04060 PF02911 Formyl transferase, C-terminal domain At1D1609_04070 PF01416 tRNA pseudouridine synthase At1D1609_04090 PF07687 Peptidase dimerisation domain At1D1609_04090 PF01546 Peptidase family M20/M25/M40 At1D1609_04100 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal At1D1609_04100 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_04100 PF14602 Hexapeptide repeat of succinyl-transferase At1D1609_04130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_04130 PF00672 HAMP domain At1D1609_04140 PF01156 Inosine-uridine preferring nucleoside hydrolase At1D1609_04150 PF00011 Hsp20/alpha crystallin family At1D1609_04200 PF00696 Amino acid kinase family At1D1609_04220 PF01926 50S ribosome-binding GTPase At1D1609_04230 PF14849 YidC periplasmic domain At1D1609_04230 PF02096 60Kd inner membrane protein At1D1609_04240 PF00825 Ribonuclease P At1D1609_04250 PF02203 Tar ligand binding domain homologue At1D1609_04250 PF00672 HAMP domain At1D1609_04250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_04260 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_04270 PF01209 ubiE/COQ5 methyltransferase family At1D1609_04280 PF00005 ABC transporter At1D1609_04290 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_04300 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_04320 PF00149 Calcineurin-like phosphoesterase At1D1609_04330 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain At1D1609_04330 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain At1D1609_04350 PF05544 Proline racemase At1D1609_04360 PF01979 Amidohydrolase family At1D1609_04370 PF00156 Phosphoribosyl transferase domain At1D1609_04380 PF00294 pfkB family carbohydrate kinase At1D1609_04410 PF00342 Phosphoglucose isomerase At1D1609_04420 PF13193 AMP-binding enzyme C-terminal domain At1D1609_04420 PF00501 AMP-binding enzyme At1D1609_04430 PF00005 ABC transporter At1D1609_04430 PF08402 TOBE domain At1D1609_04450 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_04470 PF07715 TonB-dependent Receptor Plug Domain At1D1609_04470 PF00593 TonB dependent receptor At1D1609_04510 PF01679 Proteolipid membrane potential modulator At1D1609_04570 PF03976 Polyphosphate kinase 2 (PPK2) At1D1609_04580 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_04580 PF16736 Single Cache-like At1D1609_04580 PF00989 PAS fold At1D1609_04590 PF12849 PBP superfamily domain At1D1609_04600 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_04610 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_04620 PF00005 ABC transporter At1D1609_04630 PF01895 PhoU domain At1D1609_04640 PF00072 Response regulator receiver domain At1D1609_04640 PF00486 Transcriptional regulatory protein, C terminal At1D1609_04670 PF00202 Aminotransferase class-III At1D1609_04680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At1D1609_04680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At1D1609_04690 PF01430 Hsp33 protein At1D1609_04700 PF04379 ApaG domain At1D1609_04710 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_04720 PF00692 dUTPase At1D1609_04730 PF00230 Major intrinsic protein At1D1609_04810 PF00072 Response regulator receiver domain At1D1609_04810 PF00196 Bacterial regulatory proteins, luxR family At1D1609_04830 PF01180 Dihydroorotate dehydrogenase At1D1609_04860 PF08241 Methyltransferase domain At1D1609_04900 PF02082 Transcriptional regulator At1D1609_04910 PF00270 DEAD/DEAH box helicase At1D1609_04910 PF00271 Helicase conserved C-terminal domain At1D1609_04910 PF08494 DEAD/H associated At1D1609_04950 PF01925 Sulfite exporter TauE/SafE At1D1609_04970 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_04970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_04970 PF12806 Acetyl-CoA dehydrogenase C-terminal like At1D1609_04970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_04980 PF00108 Thiolase, N-terminal domain At1D1609_04980 PF02803 Thiolase, C-terminal domain At1D1609_05000 PF00378 Enoyl-CoA hydratase/isomerase At1D1609_05000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At1D1609_05000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At1D1609_05060 PF03334 Na+/H+ antiporter subunit At1D1609_05070 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At1D1609_05080 PF01899 Na+/H+ ion antiporter subunit At1D1609_05090 PF00361 Proton-conducting membrane transporter At1D1609_05100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At1D1609_05110 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At1D1609_05110 PF13244 Domain of unknown function (DUF4040) At1D1609_05110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At1D1609_05110 PF00361 Proton-conducting membrane transporter At1D1609_05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_05160 PF01584 CheW-like domain At1D1609_05160 PF02895 Signal transducing histidine kinase, homodimeric domain At1D1609_05160 PF01627 Hpt domain At1D1609_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_05170 PF03705 CheR methyltransferase, all-alpha domain At1D1609_05170 PF01739 CheR methyltransferase, SAM binding domain At1D1609_05180 PF00072 Response regulator receiver domain At1D1609_05180 PF01339 CheB methylesterase At1D1609_05190 PF00072 Response regulator receiver domain At1D1609_05200 PF03975 CheD chemotactic sensory transduction At1D1609_05220 PF08345 Flagellar M-ring protein C-terminal At1D1609_05220 PF01514 Secretory protein of YscJ/FliF family At1D1609_05230 PF03472 Autoinducer binding domain At1D1609_05230 PF00196 Bacterial regulatory proteins, luxR family At1D1609_05250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_05250 PF00672 HAMP domain At1D1609_05260 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_05260 PF01627 Hpt domain At1D1609_05260 PF00672 HAMP domain At1D1609_05260 PF00072 Response regulator receiver domain At1D1609_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_05270 PF01741 Large-conductance mechanosensitive channel, MscL At1D1609_05280 PF00155 Aminotransferase class I and II At1D1609_05290 PF01370 NAD dependent epimerase/dehydratase family At1D1609_05310 PF03884 DNA gyrase inhibitor YacG At1D1609_05320 PF02545 Maf-like protein At1D1609_05330 PF01176 Translation initiation factor 1A / IF-1 At1D1609_05350 PF06793 Uncharacterised protein family (UPF0262) At1D1609_05360 PF00815 Histidinol dehydrogenase At1D1609_05380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At1D1609_05730 PF00075 RNase H At1D1609_05760 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_05760 PF07724 AAA domain (Cdc48 subfamily) At1D1609_05760 PF06689 ClpX C4-type zinc finger At1D1609_05930 PF00589 Phage integrase family At1D1609_05940 PF00669 Bacterial flagellin N-terminal helical region At1D1609_05940 PF00700 Bacterial flagellin C-terminal helical region At1D1609_05950 PF00669 Bacterial flagellin N-terminal helical region At1D1609_05950 PF00700 Bacterial flagellin C-terminal helical region At1D1609_05960 PF00700 Bacterial flagellin C-terminal helical region At1D1609_05960 PF00669 Bacterial flagellin N-terminal helical region At1D1609_05970 PF00813 FliP family At1D1609_05990 PF02107 Flagellar L-ring protein At1D1609_06010 PF02119 Flagellar P-ring protein At1D1609_06020 PF13144 Chaperone for flagella basal body P-ring formation At1D1609_06030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1609_06030 PF00460 Flagella basal body rod protein At1D1609_06040 PF02049 Flagellar hook-basal body complex protein FliE At1D1609_06050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1609_06060 PF00460 Flagella basal body rod protein At1D1609_06080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1609_06080 PF18269 T3SS EscN ATPase C-terminal domain At1D1609_06090 PF00460 Flagella basal body rod protein At1D1609_06090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1609_06110 PF01618 MotA/TolQ/ExbB proton channel family At1D1609_06120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At1D1609_06130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term At1D1609_06140 PF01706 FliG C-terminal domain At1D1609_06140 PF14841 FliG middle domain At1D1609_06140 PF14842 FliG N-terminal domain At1D1609_06150 PF01312 FlhB HrpN YscU SpaS Family At1D1609_06170 PF00669 Bacterial flagellin N-terminal helical region At1D1609_06170 PF00700 Bacterial flagellin C-terminal helical region At1D1609_06190 PF13677 Membrane MotB of proton-channel complex MotA/MotB At1D1609_06190 PF00691 OmpA family At1D1609_06210 PF02120 Flagellar hook-length control protein FliK At1D1609_06230 PF00486 Transcriptional regulatory protein, C terminal At1D1609_06240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1609_06240 PF07559 Flagellar basal body protein FlaE At1D1609_06240 PF00460 Flagella basal body rod protein At1D1609_06250 PF00460 Flagella basal body rod protein At1D1609_06250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal At1D1609_06280 PF07378 Flagellar protein FlbT At1D1609_06290 PF13861 FlgD Tudor-like domain At1D1609_06290 PF03963 Flagellar hook capping protein - N-terminal region At1D1609_06290 PF13860 FlgD Ig-like domain At1D1609_06300 PF01313 Bacterial export proteins, family 3 At1D1609_06310 PF00771 FHIPEP family At1D1609_06320 PF01311 Bacterial export proteins, family 1 At1D1609_06390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain At1D1609_06390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain At1D1609_06400 PF00356 Bacterial regulatory proteins, lacI family At1D1609_06410 PF01547 Bacterial extracellular solute-binding protein At1D1609_06420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_06430 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_06440 PF00128 Alpha amylase, catalytic domain At1D1609_06450 PF17912 MalK OB fold domain At1D1609_06450 PF00005 ABC transporter At1D1609_06450 PF03459 TOBE domain At1D1609_06470 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At1D1609_06500 PF00920 Dehydratase family At1D1609_06510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase At1D1609_06520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain At1D1609_06520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain At1D1609_06530 PF01266 FAD dependent oxidoreductase At1D1609_06540 PF00120 Glutamine synthetase, catalytic domain At1D1609_06590 PF00463 Isocitrate lyase family At1D1609_06600 PF06114 IrrE N-terminal-like domain At1D1609_06600 PF01381 Helix-turn-helix At1D1609_06600 PF09856 Predicted transcriptional regulator (DUF2083) At1D1609_06610 PF13416 Bacterial extracellular solute-binding protein At1D1609_06620 PF08402 TOBE domain At1D1609_06620 PF00005 ABC transporter At1D1609_06630 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_06640 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_06660 PF13426 PAS domain At1D1609_06660 PF13188 PAS domain At1D1609_06660 PF00989 PAS fold At1D1609_06660 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_06670 PF02541 Ppx/GppA phosphatase family At1D1609_06680 PF01728 FtsJ-like methyltransferase At1D1609_06690 PF07690 Major Facilitator Superfamily At1D1609_06700 PF00753 Metallo-beta-lactamase superfamily At1D1609_06710 PF00478 IMP dehydrogenase / GMP reductase domain At1D1609_06710 PF00571 CBS domain At1D1609_06730 PF00107 Zinc-binding dehydrogenase At1D1609_06730 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_06740 PF01738 Dienelactone hydrolase family At1D1609_06750 PF00994 Probable molybdopterin binding domain At1D1609_06760 PF08544 GHMP kinases C terminal At1D1609_06760 PF00288 GHMP kinases N terminal domain At1D1609_06780 PF00348 Polyprenyl synthetase At1D1609_06810 PF06965 Na+/H+ antiporter 1 At1D1609_06810 PF01343 Peptidase family S49 At1D1609_06850 PF02091 Glycyl-tRNA synthetase alpha subunit At1D1609_06860 PF04011 LemA family At1D1609_06870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) At1D1609_06890 PF02092 Glycyl-tRNA synthetase beta subunit At1D1609_06890 PF05746 DALR anticodon binding domain At1D1609_06900 PF04463 Protein of unknown function (DUF523) At1D1609_06920 PF00672 HAMP domain At1D1609_06920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_06940 PF02843 Phosphoribosylglycinamide synthetase, C domain At1D1609_06940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain At1D1609_06940 PF02844 Phosphoribosylglycinamide synthetase, N domain At1D1609_06950 PF17674 HHH domain At1D1609_06950 PF00575 S1 RNA binding domain At1D1609_06950 PF09371 Tex-like protein N-terminal domain At1D1609_06950 PF16921 Tex protein YqgF-like domain At1D1609_06980 PF01040 UbiA prenyltransferase family At1D1609_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_07010 PF03466 LysR substrate binding domain At1D1609_07030 PF04107 Glutamate-cysteine ligase family 2(GCS2) At1D1609_07040 PF04452 RNA methyltransferase At1D1609_07050 PF01384 Phosphate transporter family At1D1609_07070 PF05116 Sucrose-6F-phosphate phosphohydrolase At1D1609_07080 PF00534 Glycosyl transferases group 1 At1D1609_07080 PF13439 Glycosyltransferase Family 4 At1D1609_07090 PF00392 Bacterial regulatory proteins, gntR family At1D1609_07090 PF07729 FCD domain At1D1609_07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_07110 PF03466 LysR substrate binding domain At1D1609_07120 PF02913 FAD linked oxidases, C-terminal domain At1D1609_07120 PF01565 FAD binding domain At1D1609_07140 PF01565 FAD binding domain At1D1609_07140 PF02913 FAD linked oxidases, C-terminal domain At1D1609_07150 PF13183 4Fe-4S dicluster domain At1D1609_07150 PF02754 Cysteine-rich domain At1D1609_07170 PF03734 L,D-transpeptidase catalytic domain At1D1609_07170 PF17969 L,D-transpeptidase C-terminal domain At1D1609_07180 PF03352 Methyladenine glycosylase At1D1609_07200 PF03601 Conserved hypothetical protein 698 At1D1609_07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_07210 PF03466 LysR substrate binding domain At1D1609_07270 PF13393 Histidyl-tRNA synthetase At1D1609_07270 PF03129 Anticodon binding domain At1D1609_07280 PF13393 Histidyl-tRNA synthetase At1D1609_07290 PF01634 ATP phosphoribosyltransferase At1D1609_07300 PF07681 DoxX At1D1609_07320 PF00118 TCP-1/cpn60 chaperonin family At1D1609_07330 PF00166 Chaperonin 10 Kd subunit At1D1609_07350 PF06574 FAD synthetase At1D1609_07350 PF01687 Riboflavin kinase At1D1609_07360 PF08264 Anticodon-binding domain of tRNA At1D1609_07360 PF00133 tRNA synthetases class I (I, L, M and V) At1D1609_07380 PF14437 MafB19-like deaminase At1D1609_07390 PF01479 S4 domain At1D1609_07390 PF00849 RNA pseudouridylate synthase At1D1609_07410 PF01734 Patatin-like phospholipase At1D1609_07420 PF02254 TrkA-N domain At1D1609_07420 PF00999 Sodium/hydrogen exchanger family At1D1609_07430 PF01523 Putative modulator of DNA gyrase At1D1609_07440 PF00459 Inositol monophosphatase family At1D1609_07460 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) At1D1609_07460 PF00534 Glycosyl transferases group 1 At1D1609_07480 PF02606 Tetraacyldisaccharide-1-P 4'-kinase At1D1609_07500 PF01119 DNA mismatch repair protein, C-terminal domain At1D1609_07500 PF08676 MutL C terminal dimerisation domain At1D1609_07510 PF00072 Response regulator receiver domain At1D1609_07510 PF00486 Transcriptional regulatory protein, C terminal At1D1609_07520 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_07520 PF03707 Bacterial signalling protein N terminal repeat At1D1609_07520 PF13188 PAS domain At1D1609_07520 PF00563 EAL domain At1D1609_07530 PF08450 SMP-30/Gluconolactonase/LRE-like region At1D1609_07540 PF01081 KDPG and KHG aldolase At1D1609_07550 PF05035 2-keto-3-deoxy-galactonokinase At1D1609_07570 PF01614 Bacterial transcriptional regulator At1D1609_07570 PF09339 IclR helix-turn-helix domain At1D1609_07580 PF03472 Autoinducer binding domain At1D1609_07580 PF00196 Bacterial regulatory proteins, luxR family At1D1609_07600 PF10609 NUBPL iron-transfer P-loop NTPase At1D1609_07610 PF01544 CorA-like Mg2+ transporter protein At1D1609_07620 PF02705 K+ potassium transporter At1D1609_07640 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter At1D1609_07650 PF00119 ATP synthase A chain At1D1609_07660 PF00137 ATP synthase subunit C At1D1609_07670 PF00430 ATP synthase B/B' CF(0) At1D1609_07680 PF00430 ATP synthase B/B' CF(0) At1D1609_07700 PF01351 Ribonuclease HII At1D1609_07730 PF01565 FAD binding domain At1D1609_07730 PF02913 FAD linked oxidases, C-terminal domain At1D1609_07740 PF01300 Telomere recombination At1D1609_07740 PF03481 Putative GTP-binding controlling metal-binding At1D1609_07760 PF00355 Rieske [2Fe-2S] domain At1D1609_07760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At1D1609_07770 PF00175 Oxidoreductase NAD-binding domain At1D1609_07770 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_07770 PF00970 Oxidoreductase FAD-binding domain At1D1609_07780 PF07886 BA14K-like protein At1D1609_07790 PF07886 BA14K-like protein At1D1609_07810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_07810 PF12806 Acetyl-CoA dehydrogenase C-terminal like At1D1609_07810 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_07810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_07840 PF05958 tRNA (Uracil-5-)-methyltransferase At1D1609_07850 PF01728 FtsJ-like methyltransferase At1D1609_07850 PF01479 S4 domain At1D1609_07860 PF00672 HAMP domain At1D1609_07860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_07880 PF01037 Lrp/AsnC ligand binding domain At1D1609_07940 PF02779 Transketolase, pyrimidine binding domain At1D1609_07940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase At1D1609_07940 PF02780 Transketolase, C-terminal domain At1D1609_07950 PF02678 Pirin At1D1609_07950 PF05726 Pirin C-terminal cupin domain At1D1609_07960 PF02609 Exonuclease VII small subunit At1D1609_07970 PF00850 Histone deacetylase domain At1D1609_07980 PF02632 BioY family At1D1609_07990 PF02361 Cobalt transport protein At1D1609_08000 PF00005 ABC transporter At1D1609_08010 PF06224 Winged helix DNA-binding domain At1D1609_08020 PF01609 Transposase DDE domain At1D1609_08040 PF01264 Chorismate synthase At1D1609_08060 PF00300 Histidine phosphatase superfamily (branch 1) At1D1609_08080 PF00684 DnaJ central domain At1D1609_08080 PF01556 DnaJ C terminal domain At1D1609_08080 PF00226 DnaJ domain At1D1609_08100 PF01243 Pyridoxamine 5'-phosphate oxidase At1D1609_08100 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region At1D1609_08130 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_08150 PF01523 Putative modulator of DNA gyrase At1D1609_08170 PF02790 Cytochrome C oxidase subunit II, transmembrane domain At1D1609_08170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At1D1609_08180 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1609_08190 PF01040 UbiA prenyltransferase family At1D1609_08210 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 At1D1609_08220 PF00510 Cytochrome c oxidase subunit III At1D1609_08240 PF02104 SURF1 family At1D1609_08250 PF02401 LytB protein At1D1609_08260 PF01636 Phosphotransferase enzyme family At1D1609_08270 PF00075 RNase H At1D1609_08290 PF08534 Redoxin At1D1609_08290 PF00462 Glutaredoxin At1D1609_08310 PF02622 Uncharacterized ACR, COG1678 At1D1609_08330 PF10005 zinc-ribbon domain At1D1609_08330 PF15887 Putative zinc-binding metallo-peptidase At1D1609_08340 PF13188 PAS domain At1D1609_08340 PF00563 EAL domain At1D1609_08340 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_08340 PF03707 Bacterial signalling protein N terminal repeat At1D1609_08350 PF13302 Acetyltransferase (GNAT) domain At1D1609_08360 PF00675 Insulinase (Peptidase family M16) At1D1609_08360 PF05193 Peptidase M16 inactive domain At1D1609_08370 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_08370 PF14821 Threonine synthase N terminus At1D1609_08400 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_08410 PF00392 Bacterial regulatory proteins, gntR family At1D1609_08410 PF07729 FCD domain At1D1609_08440 PF01555 DNA methylase At1D1609_08440 PF18755 Restriction Enzyme Adenine Methylase Associated At1D1609_08460 PF14815 NUDIX domain At1D1609_08460 PF00730 HhH-GPD superfamily base excision DNA repair protein At1D1609_08490 PF13462 Thioredoxin At1D1609_08500 PF02463 RecF/RecN/SMC N terminal domain At1D1609_08510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_08520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain At1D1609_08520 PF02896 PEP-utilising enzyme, TIM barrel domain At1D1609_08520 PF00391 PEP-utilising enzyme, mobile domain At1D1609_08600 PF06039 Malate:quinone oxidoreductase (Mqo) At1D1609_08620 PF00009 Elongation factor Tu GTP binding domain At1D1609_08630 PF01507 Phosphoadenosine phosphosulfate reductase family At1D1609_08640 PF01507 Phosphoadenosine phosphosulfate reductase family At1D1609_08650 PF02082 Transcriptional regulator At1D1609_08670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_08680 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_08690 PF00005 ABC transporter At1D1609_08690 PF12857 TOBE-like domain At1D1609_08720 PF00107 Zinc-binding dehydrogenase At1D1609_08720 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_08720 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_08720 PF08659 KR domain At1D1609_08720 PF00550 Phosphopantetheine attachment site At1D1609_08720 PF00698 Acyl transferase domain At1D1609_08720 PF14765 Polyketide synthase dehydratase At1D1609_08720 PF16197 Ketoacyl-synthetase C-terminal extension At1D1609_08720 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_08730 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_08730 PF01590 GAF domain At1D1609_08730 PF00563 EAL domain At1D1609_08730 PF00989 PAS fold At1D1609_08750 PF13977 BetI-type transcriptional repressor, C-terminal At1D1609_08750 PF00440 Bacterial regulatory proteins, tetR family At1D1609_08760 PF00171 Aldehyde dehydrogenase family At1D1609_08770 PF00732 GMC oxidoreductase At1D1609_08770 PF05199 GMC oxidoreductase At1D1609_08800 PF00654 Voltage gated chloride channel At1D1609_08860 PF07690 Major Facilitator Superfamily At1D1609_08880 PF04679 ATP dependent DNA ligase C terminal region At1D1609_08880 PF01068 ATP dependent DNA ligase domain At1D1609_08880 PF04675 DNA ligase N terminus At1D1609_08900 PF04488 Glycosyltransferase sugar-binding region containing DXD motif At1D1609_08910 PF00403 Heavy-metal-associated domain At1D1609_08920 PF17969 L,D-transpeptidase C-terminal domain At1D1609_08920 PF03734 L,D-transpeptidase catalytic domain At1D1609_08930 PF03734 L,D-transpeptidase catalytic domain At1D1609_08930 PF17969 L,D-transpeptidase C-terminal domain At1D1609_08940 PF01047 MarR family At1D1609_08950 PF02566 OsmC-like protein At1D1609_08980 PF12848 ABC transporter At1D1609_08980 PF00005 ABC transporter At1D1609_09040 PF03466 LysR substrate binding domain At1D1609_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_09050 PF00106 short chain dehydrogenase At1D1609_09070 PF05872 Bacterial protein of unknown function (DUF853) At1D1609_09090 PF01638 HxlR-like helix-turn-helix At1D1609_09110 PF12833 Helix-turn-helix domain At1D1609_09140 PF00248 Aldo/keto reductase family At1D1609_09150 PF08279 HTH domain At1D1609_09150 PF13280 WYL domain At1D1609_09180 PF01063 Amino-transferase class IV At1D1609_09190 PF00672 HAMP domain At1D1609_09190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_09200 PF03466 LysR substrate binding domain At1D1609_09200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_09230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At1D1609_09230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At1D1609_09260 PF01810 LysE type translocator At1D1609_09270 PF01322 Cytochrome C' At1D1609_09280 PF00034 Cytochrome c At1D1609_09340 PF09278 MerR, DNA binding At1D1609_09340 PF00376 MerR family regulatory protein At1D1609_09360 PF02583 Metal-sensitive transcriptional repressor At1D1609_09390 PF00005 ABC transporter At1D1609_09390 PF00571 CBS domain At1D1609_09400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_09420 PF00326 Prolyl oligopeptidase family At1D1609_09420 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain At1D1609_09450 PF00701 Dihydrodipicolinate synthetase family At1D1609_09470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At1D1609_09470 PF02805 Metal binding domain of Ada At1D1609_09470 PF12833 Helix-turn-helix domain At1D1609_09470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At1D1609_09480 PF01594 AI-2E family transporter At1D1609_09490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_09520 PF03006 Haemolysin-III related At1D1609_09540 PF01641 SelR domain At1D1609_09560 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter At1D1609_09570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At1D1609_09600 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) At1D1609_09610 PF03334 Na+/H+ antiporter subunit At1D1609_09620 PF05443 ROS/MUCR transcriptional regulator protein At1D1609_09650 PF02657 Fe-S metabolism associated domain At1D1609_09660 PF17264 Family of unknown function (DUF5330) At1D1609_09670 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_09740 PF07687 Peptidase dimerisation domain At1D1609_09740 PF01546 Peptidase family M20/M25/M40 At1D1609_09770 PF00912 Transglycosylase At1D1609_09770 PF00905 Penicillin binding protein transpeptidase domain At1D1609_09780 PF03692 Putative zinc- or iron-chelating domain At1D1609_09790 PF00905 Penicillin binding protein transpeptidase domain At1D1609_09800 PF00403 Heavy-metal-associated domain At1D1609_09810 PF09278 MerR, DNA binding At1D1609_09810 PF00376 MerR family regulatory protein At1D1609_09860 PF07690 Major Facilitator Superfamily At1D1609_09890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family At1D1609_09910 PF01037 Lrp/AsnC ligand binding domain At1D1609_09910 PF13404 AsnC-type helix-turn-helix domain At1D1609_10000 PF04860 Phage portal protein At1D1609_10200 PF00486 Transcriptional regulatory protein, C terminal At1D1609_10200 PF00072 Response regulator receiver domain At1D1609_10210 PF16527 Two-component sensor protein CpxA, periplasmic domain At1D1609_10210 PF00672 HAMP domain At1D1609_10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_10210 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_10240 PF03100 CcmE At1D1609_10250 PF01578 Cytochrome C assembly protein At1D1609_10250 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal At1D1609_10260 PF03918 Cytochrome C biogenesis protein At1D1609_10270 PF13180 PDZ domain At1D1609_10280 PF00072 Response regulator receiver domain At1D1609_10280 PF00486 Transcriptional regulatory protein, C terminal At1D1609_10290 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_10300 PF04134 Protein of unknown function, DUF393 At1D1609_10330 PF08335 GlnD PII-uridylyltransferase At1D1609_10330 PF03710 Glutamate-ammonia ligase adenylyltransferase At1D1609_10340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_10340 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_10340 PF00989 PAS fold At1D1609_10360 PF01433 Peptidase family M1 domain At1D1609_10360 PF11940 Domain of unknown function (DUF3458) Ig-like fold At1D1609_10360 PF17432 Domain of unknown function (DUF3458_C) ARM repeats At1D1609_10370 PF00892 EamA-like transporter family At1D1609_10400 PF00012 Hsp70 protein At1D1609_10410 PF00563 EAL domain At1D1609_10410 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_10410 PF13185 GAF domain At1D1609_10450 PF03796 DnaB-like helicase C terminal domain At1D1609_10480 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_10480 PF00107 Zinc-binding dehydrogenase At1D1609_10490 PF01638 HxlR-like helix-turn-helix At1D1609_10500 PF02673 Bacitracin resistance protein BacA At1D1609_10510 PF03448 MgtE intracellular N domain At1D1609_10510 PF01769 Divalent cation transporter At1D1609_10510 PF00571 CBS domain At1D1609_10520 PF07690 Major Facilitator Superfamily At1D1609_10530 PF00781 Diacylglycerol kinase catalytic domain At1D1609_10540 PF00202 Aminotransferase class-III At1D1609_10570 PF09957 Bacterial antitoxin of type II TA system, VapB At1D1609_10580 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus At1D1609_10580 PF01048 Phosphorylase superfamily At1D1609_10640 PF00155 Aminotransferase class I and II At1D1609_10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_10660 PF14759 Reductase C-terminal At1D1609_10670 PF03328 HpcH/HpaI aldolase/citrate lyase family At1D1609_10700 PF02530 Porin subfamily At1D1609_10710 PF02530 Porin subfamily At1D1609_10720 PF14718 Soluble lytic murein transglycosylase L domain At1D1609_10720 PF01464 Transglycosylase SLT domain At1D1609_10730 PF00701 Dihydrodipicolinate synthetase family At1D1609_10740 PF01668 SmpB protein At1D1609_10750 PF00672 HAMP domain At1D1609_10750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_10770 PF01192 RNA polymerase Rpb6 At1D1609_10780 PF13291 ACT domain At1D1609_10780 PF02824 TGS domain At1D1609_10780 PF04607 Region found in RelA / SpoT proteins At1D1609_10810 PF01648 4'-phosphopantetheinyl transferase superfamily At1D1609_10820 PF10502 Signal peptidase, peptidase S26 At1D1609_10830 PF00035 Double-stranded RNA binding motif At1D1609_10830 PF14622 Ribonuclease-III-like At1D1609_10840 PF01926 50S ribosome-binding GTPase At1D1609_10840 PF07650 KH domain At1D1609_10850 PF00027 Cyclic nucleotide-binding domain At1D1609_10850 PF13545 Crp-like helix-turn-helix domain At1D1609_10860 PF00072 Response regulator receiver domain At1D1609_10870 PF11967 Recombination protein O N terminal At1D1609_10870 PF02565 Recombination protein O C terminal At1D1609_10880 PF07690 Major Facilitator Superfamily At1D1609_10890 PF05958 tRNA (Uracil-5-)-methyltransferase At1D1609_10910 PF01966 HD domain At1D1609_10930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_10950 PF00005 ABC transporter At1D1609_10960 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_10970 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment At1D1609_10980 PF00924 Mechanosensitive ion channel At1D1609_10980 PF05552 Conserved TM helix At1D1609_11000 PF01966 HD domain At1D1609_11010 PF01571 Aminomethyltransferase folate-binding domain At1D1609_11050 PF00293 NUDIX domain At1D1609_11060 PF02694 Uncharacterised BCR, YnfA/UPF0060 family At1D1609_11080 PF00072 Response regulator receiver domain At1D1609_11080 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_11100 PF01066 CDP-alcohol phosphatidyltransferase At1D1609_11110 PF02666 Phosphatidylserine decarboxylase At1D1609_11120 PF00664 ABC transporter transmembrane region At1D1609_11120 PF00005 ABC transporter At1D1609_11140 PF03641 Possible lysine decarboxylase At1D1609_11150 PF00905 Penicillin binding protein transpeptidase domain At1D1609_11150 PF03717 Penicillin-binding Protein dimerisation domain At1D1609_11160 PF00892 EamA-like transporter family At1D1609_11190 PF00561 alpha/beta hydrolase fold At1D1609_11230 PF04480 Protein of unknown function (DUF559) At1D1609_11250 PF09190 DALR domain At1D1609_11250 PF01406 tRNA synthetases class I (C) catalytic domain At1D1609_11260 PF00106 short chain dehydrogenase At1D1609_11270 PF13537 Glutamine amidotransferase domain At1D1609_11270 PF00156 Phosphoribosyl transferase domain At1D1609_11280 PF02674 Colicin V production protein At1D1609_11290 PF06745 KaiC At1D1609_11290 PF18073 Rubredoxin metal binding domain At1D1609_11320 PF01168 Alanine racemase, N-terminal domain At1D1609_11320 PF00842 Alanine racemase, C-terminal domain At1D1609_11330 PF12852 Cupin At1D1609_11330 PF12833 Helix-turn-helix domain At1D1609_11340 PF03591 AzlC protein At1D1609_11360 PF00772 DnaB-like helicase N terminal domain At1D1609_11360 PF03796 DnaB-like helicase C terminal domain At1D1609_11390 PF13533 Biotin-lipoyl like At1D1609_11410 PF03948 Ribosomal protein L9, C-terminal domain At1D1609_11410 PF01281 Ribosomal protein L9, N-terminal domain At1D1609_11430 PF01084 Ribosomal protein S18 At1D1609_11440 PF01250 Ribosomal protein S6 At1D1609_11470 PF00248 Aldo/keto reductase family At1D1609_11480 PF00698 Acyl transferase domain At1D1609_11500 PF00550 Phosphopantetheine attachment site At1D1609_11510 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_11510 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_11520 PF02618 YceG-like family At1D1609_11530 PF03755 YicC-like family, N-terminal region At1D1609_11530 PF08340 Domain of unknown function (DUF1732) At1D1609_11540 PF00625 Guanylate kinase At1D1609_11560 PF01850 PIN domain At1D1609_11570 PF01738 Dienelactone hydrolase family At1D1609_11580 PF00398 Ribosomal RNA adenine dimethylase At1D1609_11590 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At1D1609_11610 PF04453 LPS transport system D At1D1609_11610 PF03968 OstA-like protein At1D1609_11640 PF02789 Cytosol aminopeptidase family, N-terminal domain At1D1609_11640 PF00883 Cytosol aminopeptidase family, catalytic domain At1D1609_11660 PF00563 EAL domain At1D1609_11660 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_11660 PF03707 Bacterial signalling protein N terminal repeat At1D1609_11670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_11680 PF00360 Phytochrome region At1D1609_11680 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_11680 PF01590 GAF domain At1D1609_11680 PF00563 EAL domain At1D1609_11690 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_11690 PF00563 EAL domain At1D1609_11690 PF03707 Bacterial signalling protein N terminal repeat At1D1609_11700 PF12848 ABC transporter At1D1609_11700 PF00005 ABC transporter At1D1609_11710 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_11710 PF17158 Membrane-associated sensor, integral membrane domain At1D1609_11720 PF13417 Glutathione S-transferase, N-terminal domain At1D1609_11730 PF00334 Nucleoside diphosphate kinase At1D1609_11770 PF02391 MoaE protein At1D1609_11790 PF01066 CDP-alcohol phosphatidyltransferase At1D1609_11800 PF01541 GIY-YIG catalytic domain At1D1609_11800 PF02151 UvrB/uvrC motif At1D1609_11800 PF08459 UvrC Helix-hairpin-helix N-terminal At1D1609_11820 PF13505 Outer membrane protein beta-barrel domain At1D1609_11830 PF13417 Glutathione S-transferase, N-terminal domain At1D1609_11830 PF00043 Glutathione S-transferase, C-terminal domain At1D1609_11840 PF00445 Ribonuclease T2 family At1D1609_11860 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ At1D1609_11870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1609_11870 PF00384 Molybdopterin oxidoreductase At1D1609_11870 PF01568 Molydopterin dinucleotide binding domain At1D1609_11880 PF00293 NUDIX domain At1D1609_11900 PF00551 Formyl transferase At1D1609_11910 PF00586 AIR synthase related protein, N-terminal domain At1D1609_11910 PF02769 AIR synthase related protein, C-terminal domain At1D1609_11940 PF01594 AI-2E family transporter At1D1609_11960 PF02503 Polyphosphate kinase middle domain At1D1609_11960 PF13089 Polyphosphate kinase N-terminal domain At1D1609_11960 PF13090 Polyphosphate kinase C-terminal domain 2 At1D1609_11960 PF17941 Polyphosphate kinase C-terminal domain 1 At1D1609_11970 PF02541 Ppx/GppA phosphatase family At1D1609_11980 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_12020 PF00211 Adenylate and Guanylate cyclase catalytic domain At1D1609_12040 PF00570 HRDC domain At1D1609_12040 PF01612 3'-5' exonuclease At1D1609_12050 PF07690 Major Facilitator Superfamily At1D1609_12060 PF00152 tRNA synthetases class II (D, K and N) At1D1609_12060 PF01336 OB-fold nucleic acid binding domain At1D1609_12060 PF02938 GAD domain At1D1609_12080 PF00916 Sulfate permease family At1D1609_12080 PF01740 STAS domain At1D1609_12100 PF00521 DNA gyrase/topoisomerase IV, subunit A At1D1609_12100 PF03989 DNA gyrase C-terminal domain, beta-propeller At1D1609_12120 PF04376 Arginine-tRNA-protein transferase, N terminus At1D1609_12120 PF04377 Arginine-tRNA-protein transferase, C terminus At1D1609_12140 PF00490 Delta-aminolevulinic acid dehydratase At1D1609_12180 PF00464 Serine hydroxymethyltransferase At1D1609_12190 PF03477 ATP cone domain At1D1609_12200 PF01872 RibD C-terminal domain At1D1609_12200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region At1D1609_12210 PF00677 Lumazine binding domain At1D1609_12230 PF01810 LysE type translocator At1D1609_12240 PF00885 6,7-dimethyl-8-ribityllumazine synthase At1D1609_12250 PF01029 NusB family At1D1609_12260 PF07690 Major Facilitator Superfamily At1D1609_12270 PF03030 Inorganic H+ pyrophosphatase At1D1609_12310 PF02504 Fatty acid synthesis protein At1D1609_12320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At1D1609_12320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At1D1609_12330 PF00216 Bacterial DNA-binding protein At1D1609_12340 PF13411 MerR HTH family regulatory protein At1D1609_12370 PF00403 Heavy-metal-associated domain At1D1609_12380 PF00970 Oxidoreductase FAD-binding domain At1D1609_12380 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_12380 PF00175 Oxidoreductase NAD-binding domain At1D1609_12390 PF09278 MerR, DNA binding At1D1609_12390 PF00376 MerR family regulatory protein At1D1609_12400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_12410 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_12410 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_12420 PF00005 ABC transporter At1D1609_12420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_12430 PF00005 ABC transporter At1D1609_12430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_12440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_12460 PF02386 Cation transport protein At1D1609_12470 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_12470 PF00585 C-terminal regulatory domain of Threonine dehydratase At1D1609_12490 PF00072 Response regulator receiver domain At1D1609_12490 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_12500 PF02525 Flavodoxin-like fold At1D1609_12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_12510 PF03466 LysR substrate binding domain At1D1609_12530 PF02872 5'-nucleotidase, C-terminal domain At1D1609_12530 PF00149 Calcineurin-like phosphoesterase At1D1609_12580 PF00581 Rhodanese-like domain At1D1609_12590 PF01411 tRNA synthetases class II (A) At1D1609_12590 PF02272 DHHA1 domain At1D1609_12590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At1D1609_12600 PF00571 CBS domain At1D1609_12600 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_12610 PF03441 FAD binding domain of DNA photolyase At1D1609_12610 PF00875 DNA photolyase At1D1609_12630 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At1D1609_12630 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At1D1609_12680 PF06055 Exopolysaccharide synthesis, ExoD At1D1609_12700 PF09335 SNARE associated Golgi protein At1D1609_12730 PF01032 FecCD transport family At1D1609_12740 PF00005 ABC transporter At1D1609_12750 PF00127 Copper binding proteins, plastocyanin/azurin family At1D1609_12760 PF00210 Ferritin-like domain At1D1609_12830 PF02397 Bacterial sugar transferase At1D1609_12840 PF00534 Glycosyl transferases group 1 At1D1609_12890 PF02628 Cytochrome oxidase assembly protein At1D1609_12900 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase At1D1609_12910 PF01118 Semialdehyde dehydrogenase, NAD binding domain At1D1609_12920 PF00491 Arginase family At1D1609_12930 PF13744 Helix-turn-helix domain At1D1609_12940 PF05973 Phage derived protein Gp49-like (DUF891) At1D1609_12950 PF00380 Ribosomal protein S9/S16 At1D1609_12960 PF00572 Ribosomal protein L13 At1D1609_12980 PF13380 CoA binding domain At1D1609_12990 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_13020 PF00067 Cytochrome P450 At1D1609_13030 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_13030 PF17151 Periplasmic sensor domain At1D1609_13040 PF00574 Clp protease At1D1609_13050 PF07724 AAA domain (Cdc48 subfamily) At1D1609_13050 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_13050 PF06689 ClpX C4-type zinc finger At1D1609_13060 PF05362 Lon protease (S16) C-terminal proteolytic domain At1D1609_13060 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_13060 PF02190 ATP-dependent protease La (LON) substrate-binding domain At1D1609_13070 PF00216 Bacterial DNA-binding protein At1D1609_13080 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At1D1609_13100 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 At1D1609_13110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit At1D1609_13120 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit At1D1609_13140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit At1D1609_13170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At1D1609_13170 PF10531 SLBB domain At1D1609_13170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At1D1609_13180 PF00384 Molybdopterin oxidoreductase At1D1609_13180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At1D1609_13180 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal At1D1609_13190 PF00146 NADH dehydrogenase At1D1609_13200 PF12838 4Fe-4S dicluster domain At1D1609_13210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 At1D1609_13220 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L At1D1609_13230 PF00361 Proton-conducting membrane transporter At1D1609_13230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus At1D1609_13240 PF00361 Proton-conducting membrane transporter At1D1609_13240 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus At1D1609_13250 PF00361 Proton-conducting membrane transporter At1D1609_13260 PF08279 HTH domain At1D1609_13260 PF03099 Biotin/lipoate A/B protein ligase family At1D1609_13260 PF02237 Biotin protein ligase C terminal domain At1D1609_13270 PF17770 Ribonuclease J C-terminal domain At1D1609_13270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain At1D1609_13270 PF12706 Beta-lactamase superfamily domain At1D1609_13290 PF03129 Anticodon binding domain At1D1609_13290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At1D1609_13300 PF02687 FtsX-like permease family At1D1609_13300 PF12704 MacB-like periplasmic core domain At1D1609_13310 PF00005 ABC transporter At1D1609_13320 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1609_13320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1609_13320 PF14579 Helix-hairpin-helix motif At1D1609_13320 PF02811 PHP domain At1D1609_13340 PF11799 impB/mucB/samB family C-terminal domain At1D1609_13340 PF00817 impB/mucB/samB family At1D1609_13360 PF00072 Response regulator receiver domain At1D1609_13370 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_13370 PF00072 Response regulator receiver domain At1D1609_13380 PF00471 Ribosomal protein L33 At1D1609_13390 PF07690 Major Facilitator Superfamily At1D1609_13420 PF17876 Cold shock domain At1D1609_13420 PF08461 Ribonuclease R winged-helix domain At1D1609_13420 PF08206 Ribonuclease B OB domain At1D1609_13420 PF00773 RNB domain At1D1609_13420 PF00575 S1 RNA binding domain At1D1609_13430 PF01396 Topoisomerase DNA binding C4 zinc finger At1D1609_13430 PF13368 Topoisomerase C-terminal repeat At1D1609_13430 PF01751 Toprim domain At1D1609_13430 PF01131 DNA topoisomerase At1D1609_13450 PF17782 DprA winged helix domain At1D1609_13450 PF02481 DNA recombination-mediator protein A At1D1609_13460 PF02660 Glycerol-3-phosphate acyltransferase At1D1609_13470 PF01979 Amidohydrolase family At1D1609_13480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain At1D1609_13480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain At1D1609_13500 PF18158 Adaptive response protein AidB N-terminal domain At1D1609_13500 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_13500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_13510 PF00583 Acetyltransferase (GNAT) family At1D1609_13570 PF03652 Holliday junction resolvase At1D1609_13580 PF03831 PhnA domain At1D1609_13580 PF08274 PhnA Zinc-Ribbon At1D1609_13600 PF02686 Glu-tRNAGln amidotransferase C subunit At1D1609_13610 PF01425 Amidase At1D1609_13620 PF09857 Putative toxin of bacterial toxin-antitoxin pair At1D1609_13650 PF02637 GatB domain At1D1609_13650 PF02934 GatB/GatE catalytic domain At1D1609_13670 PF00583 Acetyltransferase (GNAT) family At1D1609_13710 PF03588 Leucyl/phenylalanyl-tRNA protein transferase At1D1609_13720 PF02785 Biotin carboxylase C-terminal domain At1D1609_13720 PF00289 Biotin carboxylase, N-terminal domain At1D1609_13720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_13730 PF00364 Biotin-requiring enzyme At1D1609_13740 PF01220 Dehydroquinase class II At1D1609_13750 PF13462 Thioredoxin At1D1609_13750 PF06965 Na+/H+ antiporter 1 At1D1609_13760 PF00155 Aminotransferase class I and II At1D1609_13810 PF00575 S1 RNA binding domain At1D1609_13810 PF12111 Polyribonucleotide phosphorylase C terminal At1D1609_13810 PF10150 Ribonuclease E/G family At1D1609_13830 PF01520 N-acetylmuramoyl-L-alanine amidase At1D1609_13840 PF00912 Transglycosylase At1D1609_13840 PF17092 Penicillin-binding protein OB-like domain At1D1609_13840 PF00905 Penicillin binding protein transpeptidase domain At1D1609_13850 PF00472 RF-1 domain At1D1609_13850 PF03462 PCRF domain At1D1609_13880 PF01513 ATP-NAD kinase At1D1609_13890 PF02567 Phenazine biosynthesis-like protein At1D1609_13920 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_13940 PF00809 Pterin binding enzyme At1D1609_13950 PF02152 Dihydroneopterin aldolase At1D1609_13960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) At1D1609_13980 PF05128 Domain of unknown function (DUF697) At1D1609_13990 PF04317 YcjX-like family, DUF463 At1D1609_14010 PF01258 Prokaryotic dksA/traR C4-type zinc finger At1D1609_14040 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_14040 PF00072 Response regulator receiver domain At1D1609_14040 PF13188 PAS domain At1D1609_14040 PF08448 PAS fold At1D1609_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_14050 PF02617 ATP-dependent Clp protease adaptor protein ClpS At1D1609_14060 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_14060 PF17871 AAA lid domain At1D1609_14060 PF02861 Clp amino terminal domain, pathogenicity island component At1D1609_14060 PF07724 AAA domain (Cdc48 subfamily) At1D1609_14060 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_14090 PF03466 LysR substrate binding domain At1D1609_14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_14110 PF01230 HIT domain At1D1609_14160 PF00318 Ribosomal protein S2 At1D1609_14170 PF00889 Elongation factor TS At1D1609_14180 PF00696 Amino acid kinase family At1D1609_14190 PF01765 Ribosome recycling factor At1D1609_14200 PF01255 Putative undecaprenyl diphosphate synthase At1D1609_14220 PF02163 Peptidase family M50 At1D1609_14220 PF17820 PDZ domain At1D1609_14230 PF07244 Surface antigen variable number repeat At1D1609_14230 PF01103 Surface antigen At1D1609_14240 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_14240 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD At1D1609_14250 PF07977 FabA-like domain At1D1609_14260 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_14260 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 At1D1609_14270 PF17930 LpxI N-terminal domain At1D1609_14270 PF06230 LpxI C-terminal domain At1D1609_14280 PF02684 Lipid-A-disaccharide synthetase At1D1609_14290 PF07729 FCD domain At1D1609_14290 PF00392 Bacterial regulatory proteins, gntR family At1D1609_14300 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_14310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_14330 PF00005 ABC transporter At1D1609_14340 PF00285 Citrate synthase, C-terminal domain At1D1609_14370 PF00717 Peptidase S24-like At1D1609_14370 PF01726 LexA DNA binding domain At1D1609_14380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_14390 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_14390 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_14400 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_14400 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_14410 PF02780 Transketolase, C-terminal domain At1D1609_14410 PF02779 Transketolase, pyrimidine binding domain At1D1609_14420 PF00456 Transketolase, thiamine diphosphate binding domain At1D1609_14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_14440 PF03466 LysR substrate binding domain At1D1609_14460 PF02733 Dak1 domain At1D1609_14470 PF02734 DAK2 domain At1D1609_14480 PF02502 Ribose/Galactose Isomerase At1D1609_14500 PF00793 DAHP synthetase I family At1D1609_14510 PF03952 Enolase, N-terminal domain At1D1609_14510 PF00113 Enolase, C-terminal TIM barrel domain At1D1609_14530 PF00676 Dehydrogenase E1 component At1D1609_14540 PF02780 Transketolase, C-terminal domain At1D1609_14540 PF02779 Transketolase, pyrimidine binding domain At1D1609_14540 PF00364 Biotin-requiring enzyme At1D1609_14550 PF02817 e3 binding domain At1D1609_14550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At1D1609_14550 PF00364 Biotin-requiring enzyme At1D1609_14570 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_14570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1609_14590 PF04055 Radical SAM superfamily At1D1609_14590 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family At1D1609_14600 PF01609 Transposase DDE domain At1D1609_14610 PF00892 EamA-like transporter family At1D1609_14650 PF03364 Polyketide cyclase / dehydrase and lipid transport At1D1609_14660 PF02464 Competence-damaged protein At1D1609_14670 PF02542 YgbB family At1D1609_14670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase At1D1609_14680 PF01207 Dihydrouridine synthase (Dus) At1D1609_14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_14690 PF00989 PAS fold At1D1609_14690 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_14700 PF02954 Bacterial regulatory protein, Fis family At1D1609_14700 PF00072 Response regulator receiver domain At1D1609_14700 PF00158 Sigma-54 interaction domain At1D1609_14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_14710 PF00989 PAS fold At1D1609_14710 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_14710 PF00672 HAMP domain At1D1609_14720 PF00072 Response regulator receiver domain At1D1609_14720 PF02954 Bacterial regulatory protein, Fis family At1D1609_14720 PF00158 Sigma-54 interaction domain At1D1609_14730 PF02080 TrkA-C domain At1D1609_14730 PF02254 TrkA-N domain At1D1609_14740 PF17209 Hfq protein At1D1609_14750 PF16360 GTP-binding GTPase Middle Region At1D1609_14750 PF13167 GTP-binding GTPase N-terminal At1D1609_14750 PF01926 50S ribosome-binding GTPase At1D1609_14760 PF03819 MazG nucleotide pyrophosphohydrolase domain At1D1609_14780 PF10414 Sirohaem synthase dimerisation region At1D1609_14780 PF14824 Sirohaem biosynthesis protein central At1D1609_14780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_14820 PF00175 Oxidoreductase NAD-binding domain At1D1609_14820 PF00970 Oxidoreductase FAD-binding domain At1D1609_14860 PF02469 Fasciclin domain At1D1609_14870 PF02347 Glycine cleavage system P-protein At1D1609_14880 PF01597 Glycine cleavage H-protein At1D1609_14890 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1609_14890 PF01571 Aminomethyltransferase folate-binding domain At1D1609_14940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) At1D1609_14950 PF00849 RNA pseudouridylate synthase At1D1609_14950 PF01479 S4 domain At1D1609_14960 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_14990 PF01042 Endoribonuclease L-PSP At1D1609_15000 PF00756 Putative esterase At1D1609_15020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 At1D1609_15040 PF00578 AhpC/TSA family At1D1609_15040 PF10417 C-terminal domain of 1-Cys peroxiredoxin At1D1609_15080 PF03358 NADPH-dependent FMN reductase At1D1609_15090 PF03960 ArsC family At1D1609_15100 PF01758 Sodium Bile acid symporter family At1D1609_15150 PF00654 Voltage gated chloride channel At1D1609_15160 PF03099 Biotin/lipoate A/B protein ligase family At1D1609_15160 PF12706 Beta-lactamase superfamily domain At1D1609_15170 PF01026 TatD related DNase At1D1609_15180 PF08264 Anticodon-binding domain of tRNA At1D1609_15180 PF09334 tRNA synthetases class I (M) At1D1609_15190 PF09115 DNA polymerase III, delta subunit, C terminal At1D1609_15200 PF02223 Thymidylate kinase At1D1609_15210 PF07943 Penicillin-binding protein 5, C-terminal domain At1D1609_15210 PF00768 D-alanyl-D-alanine carboxypeptidase At1D1609_15220 PF05036 Sporulation related domain At1D1609_15220 PF03330 Lytic transglycolase At1D1609_15290 PF03354 Phage Terminase At1D1609_15450 PF00521 DNA gyrase/topoisomerase IV, subunit A At1D1609_15450 PF03989 DNA gyrase C-terminal domain, beta-propeller At1D1609_15460 PF01914 MarC family integral membrane protein At1D1609_15470 PF03448 MgtE intracellular N domain At1D1609_15470 PF00571 CBS domain At1D1609_15470 PF01769 Divalent cation transporter At1D1609_15480 PF05016 ParE toxin of type II toxin-antitoxin system, parDE At1D1609_15490 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH At1D1609_15500 PF00436 Single-strand binding protein family At1D1609_15510 PF17755 UvrA DNA-binding domain At1D1609_15510 PF17760 UvrA interaction domain At1D1609_15530 PF01207 Dihydrouridine synthase (Dus) At1D1609_15540 PF01557 Fumarylacetoacetate (FAA) hydrolase family At1D1609_15550 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_15570 PF00950 ABC 3 transport family At1D1609_15580 PF00005 ABC transporter At1D1609_15590 PF01297 Zinc-uptake complex component A periplasmic At1D1609_15600 PF00356 Bacterial regulatory proteins, lacI family At1D1609_15620 PF00248 Aldo/keto reductase family At1D1609_15640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1609_15640 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain At1D1609_15650 PF03597 Cytochrome oxidase maturation protein cbb3-type At1D1609_15670 PF05751 FixH At1D1609_15680 PF12801 4Fe-4S binding domain At1D1609_15680 PF13746 4Fe-4S dicluster domain At1D1609_15680 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase At1D1609_15710 PF01609 Transposase DDE domain At1D1609_15720 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP At1D1609_15720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III At1D1609_15750 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1609_15760 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase At1D1609_15790 PF09278 MerR, DNA binding At1D1609_15790 PF00376 MerR family regulatory protein At1D1609_15800 PF00571 CBS domain At1D1609_15800 PF03448 MgtE intracellular N domain At1D1609_15800 PF01769 Divalent cation transporter At1D1609_15810 PF00384 Molybdopterin oxidoreductase At1D1609_15830 PF01327 Polypeptide deformylase At1D1609_15860 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_15860 PF00989 PAS fold At1D1609_15880 PF03099 Biotin/lipoate A/B protein ligase family At1D1609_15890 PF00107 Zinc-binding dehydrogenase At1D1609_15890 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_15940 PF02355 Protein export membrane protein At1D1609_15940 PF07549 SecD/SecF GG Motif At1D1609_15950 PF02699 Preprotein translocase subunit At1D1609_15970 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_15970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At1D1609_15980 PF00440 Bacterial regulatory proteins, tetR family At1D1609_15990 PF00067 Cytochrome P450 At1D1609_16010 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_16010 PF06426 Serine acetyltransferase, N-terminal At1D1609_16020 PF00561 alpha/beta hydrolase fold At1D1609_16040 PF01494 FAD binding domain At1D1609_16050 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_16060 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_16070 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_16080 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_16090 PF00005 ABC transporter At1D1609_16100 PF02272 DHHA1 domain At1D1609_16100 PF17768 RecJ OB domain At1D1609_16100 PF01368 DHH family At1D1609_16120 PF01842 ACT domain At1D1609_16120 PF00742 Homoserine dehydrogenase At1D1609_16120 PF03447 Homoserine dehydrogenase, NAD binding domain At1D1609_16130 PF00155 Aminotransferase class I and II At1D1609_16140 PF01156 Inosine-uridine preferring nucleoside hydrolase At1D1609_16150 PF01925 Sulfite exporter TauE/SafE At1D1609_16180 PF00107 Zinc-binding dehydrogenase At1D1609_16180 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_16190 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_16190 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_16210 PF07977 FabA-like domain At1D1609_16220 PF00550 Phosphopantetheine attachment site At1D1609_16230 PF04055 Radical SAM superfamily At1D1609_16240 PF13545 Crp-like helix-turn-helix domain At1D1609_16240 PF00027 Cyclic nucleotide-binding domain At1D1609_16260 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus At1D1609_16270 PF17746 SfsA N-terminal OB domain At1D1609_16270 PF03749 Sugar fermentation stimulation protein RE domain At1D1609_16280 PF00557 Metallopeptidase family M24 At1D1609_16290 PF04002 RadC-like JAB domain At1D1609_16320 PF01474 Class-II DAHP synthetase family At1D1609_16330 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_16330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1609_16350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) At1D1609_16360 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_16380 PF10415 Fumarase C C-terminus At1D1609_16380 PF00206 Lyase At1D1609_16390 PF00117 Glutamine amidotransferase class-I At1D1609_16390 PF06418 CTP synthase N-terminus At1D1609_16400 PF03840 Preprotein translocase SecG subunit At1D1609_16410 PF00121 Triosephosphate isomerase At1D1609_16430 PF00986 DNA gyrase B subunit, carboxyl terminus At1D1609_16430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_16430 PF01751 Toprim domain At1D1609_16430 PF00204 DNA gyrase B At1D1609_16490 PF05594 Haemagluttinin repeat At1D1609_16490 PF13332 Hemagglutinin repeat At1D1609_16490 PF05860 haemagglutination activity domain At1D1609_16490 PF13018 Extended Signal Peptide of Type V secretion system At1D1609_16520 PF05860 haemagglutination activity domain At1D1609_16520 PF13332 Hemagglutinin repeat At1D1609_16520 PF04829 Pre-toxin domain with VENN motif At1D1609_16520 PF05594 Haemagluttinin repeat At1D1609_16520 PF15526 Novel toxin 21 At1D1609_16550 PF00574 Clp protease At1D1609_16570 PF01022 Bacterial regulatory protein, arsR family At1D1609_16580 PF13091 PLD-like domain At1D1609_16590 PF00072 Response regulator receiver domain At1D1609_16600 PF01571 Aminomethyltransferase folate-binding domain At1D1609_16600 PF01266 FAD dependent oxidoreductase At1D1609_16600 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1609_16600 PF16350 FAD dependent oxidoreductase central domain At1D1609_16610 PF12795 Mechanosensitive ion channel porin domain At1D1609_16610 PF00924 Mechanosensitive ion channel At1D1609_16610 PF12794 Mechanosensitive ion channel inner membrane domain 1 At1D1609_16740 PF00005 ABC transporter At1D1609_16750 PF02405 Permease MlaE At1D1609_16760 PF13378 Enolase C-terminal domain-like At1D1609_16760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_16780 PF00390 Malic enzyme, N-terminal domain At1D1609_16780 PF03949 Malic enzyme, NAD binding domain At1D1609_16780 PF01515 Phosphate acetyl/butaryl transferase At1D1609_16810 PF00881 Nitroreductase family At1D1609_16820 PF07676 WD40-like Beta Propeller Repeat At1D1609_16840 PF00795 Carbon-nitrogen hydrolase At1D1609_16840 PF02540 NAD synthase At1D1609_16850 PF00884 Sulfatase At1D1609_16870 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_16870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1609_16890 PF05698 Bacterial trigger factor protein (TF) C-terminus At1D1609_16890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase At1D1609_16890 PF05697 Bacterial trigger factor protein (TF) At1D1609_16940 PF01134 Glucose inhibited division protein A At1D1609_16980 PF00107 Zinc-binding dehydrogenase At1D1609_16980 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_17000 PF00550 Phosphopantetheine attachment site At1D1609_17010 PF00501 AMP-binding enzyme At1D1609_17010 PF13193 AMP-binding enzyme C-terminal domain At1D1609_17020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1609_17020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At1D1609_17030 PF00425 chorismate binding enzyme At1D1609_17030 PF04715 Anthranilate synthase component I, N terminal region At1D1609_17040 PF01702 Queuine tRNA-ribosyltransferase At1D1609_17050 PF02547 Queuosine biosynthesis protein At1D1609_17060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At1D1609_17070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD At1D1609_17080 PF01467 Cytidylyltransferase-like At1D1609_17120 PF00591 Glycosyl transferase family, a/b domain At1D1609_17120 PF02885 Glycosyl transferase family, helical bundle domain At1D1609_17130 PF00218 Indole-3-glycerol phosphate synthase At1D1609_17140 PF01967 MoaC family At1D1609_17150 PF03454 MoeA C-terminal region (domain IV) At1D1609_17150 PF03453 MoeA N-terminal region (domain I and II) At1D1609_17150 PF00994 Probable molybdopterin binding domain At1D1609_17160 PF17158 Membrane-associated sensor, integral membrane domain At1D1609_17160 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_17180 PF00999 Sodium/hydrogen exchanger family At1D1609_17180 PF02254 TrkA-N domain At1D1609_17200 PF04055 Radical SAM superfamily At1D1609_17200 PF06463 Molybdenum Cofactor Synthesis C At1D1609_17210 PF00892 EamA-like transporter family At1D1609_17220 PF07690 Major Facilitator Superfamily At1D1609_17230 PF12804 MobA-like NTP transferase domain At1D1609_17240 PF03205 Molybdopterin guanine dinucleotide synthesis protein B At1D1609_17250 PF01551 Peptidase family M23 At1D1609_17270 PF01975 Survival protein SurE At1D1609_17280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At1D1609_17280 PF02403 Seryl-tRNA synthetase N-terminal domain At1D1609_17290 PF00902 Sec-independent protein translocase protein (TatC) At1D1609_17300 PF02416 mttA/Hcf106 family At1D1609_17310 PF02416 mttA/Hcf106 family At1D1609_17320 PF04079 Segregation and condensation complex subunit ScpB At1D1609_17330 PF02616 Segregation and condensation protein ScpA At1D1609_17340 PF00933 Glycosyl hydrolase family 3 N terminal domain At1D1609_17360 PF00750 tRNA synthetases class I (R) At1D1609_17360 PF03485 Arginyl tRNA synthetase N terminal domain At1D1609_17360 PF05746 DALR anticodon binding domain At1D1609_17370 PF01966 HD domain At1D1609_17370 PF13286 Phosphohydrolase-associated domain At1D1609_17380 PF01521 Iron-sulphur cluster biosynthesis At1D1609_17400 PF08238 Sel1 repeat At1D1609_17420 PF08264 Anticodon-binding domain of tRNA At1D1609_17420 PF10458 Valyl tRNA synthetase tRNA binding arm At1D1609_17420 PF00133 tRNA synthetases class I (I, L, M and V) At1D1609_17770 PF06381 Protein of unknown function (DUF1073) At1D1609_17850 PF08299 Bacterial dnaA protein helix-turn-helix At1D1609_17850 PF00308 Bacterial dnaA protein At1D1609_17850 PF11638 DnaA N-terminal domain At1D1609_17900 PF00145 C-5 cytosine-specific DNA methylase At1D1609_18310 PF03358 NADPH-dependent FMN reductase At1D1609_18320 PF02464 Competence-damaged protein At1D1609_18320 PF18146 Damage-inducible protein CinA KH domain At1D1609_18320 PF00994 Probable molybdopterin binding domain At1D1609_18330 PF00582 Universal stress protein family At1D1609_18340 PF00156 Phosphoribosyl transferase domain At1D1609_18360 PF08471 Class II vitamin B12-dependent ribonucleotide reductase At1D1609_18360 PF02867 Ribonucleotide reductase, barrel domain At1D1609_18410 PF10137 Predicted nucleotide-binding protein containing TIR-like domain At1D1609_18450 PF13289 SIR2-like domain At1D1609_18460 PF13276 HTH-like domain At1D1609_18460 PF13683 Integrase core domain At1D1609_18470 PF01527 Transposase At1D1609_18500 PF01566 Natural resistance-associated macrophage protein At1D1609_18520 PF00005 ABC transporter At1D1609_18520 PF00664 ABC transporter transmembrane region At1D1609_18530 PF01594 AI-2E family transporter At1D1609_18540 PF01609 Transposase DDE domain At1D1609_18550 PF00583 Acetyltransferase (GNAT) family At1D1609_18610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) At1D1609_18610 PF02824 TGS domain At1D1609_18610 PF03129 Anticodon binding domain At1D1609_18610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At1D1609_18630 PF01809 Putative membrane protein insertion efficiency factor At1D1609_18650 PF01227 GTP cyclohydrolase I At1D1609_18660 PF01502 Phosphoribosyl-AMP cyclohydrolase At1D1609_18670 PF01734 Patatin-like phospholipase At1D1609_18680 PF00571 CBS domain At1D1609_18680 PF00478 IMP dehydrogenase / GMP reductase domain At1D1609_18740 PF03313 Serine dehydratase alpha chain At1D1609_18740 PF03315 Serine dehydratase beta chain At1D1609_18810 PF03466 LysR substrate binding domain At1D1609_18810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_18830 PF01965 DJ-1/PfpI family At1D1609_18830 PF12833 Helix-turn-helix domain At1D1609_18840 PF01256 Carbohydrate kinase At1D1609_18840 PF03853 YjeF-related protein N-terminus At1D1609_18850 PF00543 Nitrogen regulatory protein P-II At1D1609_18860 PF00120 Glutamine synthetase, catalytic domain At1D1609_18860 PF03951 Glutamine synthetase, beta-Grasp domain At1D1609_18880 PF08755 Hemimethylated DNA-binding protein YccV like At1D1609_18900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_18920 PF00892 EamA-like transporter family At1D1609_18930 PF00106 short chain dehydrogenase At1D1609_18940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term At1D1609_18940 PF12833 Helix-turn-helix domain At1D1609_18950 PF02559 CarD-like/TRCF domain At1D1609_18950 PF00271 Helicase conserved C-terminal domain At1D1609_18950 PF03461 TRCF domain At1D1609_18950 PF17757 UvrB interaction domain At1D1609_18950 PF00270 DEAD/DEAH box helicase At1D1609_18970 PF17191 RecG wedge domain At1D1609_18970 PF00270 DEAD/DEAH box helicase At1D1609_18970 PF00271 Helicase conserved C-terminal domain At1D1609_18990 PF05016 ParE toxin of type II toxin-antitoxin system, parDE At1D1609_19000 PF01402 Ribbon-helix-helix protein, copG family At1D1609_19030 PF01380 SIS domain At1D1609_19040 PF12804 MobA-like NTP transferase domain At1D1609_19040 PF14602 Hexapeptide repeat of succinyl-transferase At1D1609_19040 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_19050 PF07729 FCD domain At1D1609_19050 PF00392 Bacterial regulatory proteins, gntR family At1D1609_19060 PF02608 ABC transporter substrate-binding protein PnrA-like At1D1609_19090 PF00005 ABC transporter At1D1609_19110 PF01494 FAD binding domain At1D1609_19120 PF03547 Membrane transport protein At1D1609_19130 PF02683 Cytochrome C biogenesis protein transmembrane region At1D1609_19150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_19160 PF00313 'Cold-shock' DNA-binding domain At1D1609_19480 PF12704 MacB-like periplasmic core domain At1D1609_19480 PF00005 ABC transporter At1D1609_19480 PF02687 FtsX-like permease family At1D1609_19490 PF12704 MacB-like periplasmic core domain At1D1609_19490 PF00005 ABC transporter At1D1609_19490 PF02687 FtsX-like permease family At1D1609_19530 PF01521 Iron-sulphur cluster biosynthesis At1D1609_19540 PF01883 Iron-sulfur cluster assembly protein At1D1609_19550 PF00266 Aminotransferase class-V At1D1609_19560 PF01458 Uncharacterized protein family (UPF0051) At1D1609_19570 PF00005 ABC transporter At1D1609_19580 PF01458 Uncharacterized protein family (UPF0051) At1D1609_19590 PF00266 Aminotransferase class-V At1D1609_19600 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At1D1609_19610 PF03702 Anhydro-N-acetylmuramic acid kinase At1D1609_19620 PF00579 tRNA synthetases class I (W and Y) At1D1609_19640 PF00578 AhpC/TSA family At1D1609_19650 PF04305 Protein of unknown function (DUF455) At1D1609_19660 PF01476 LysM domain At1D1609_19660 PF08525 Opacity-associated protein A N-terminal motif At1D1609_19660 PF01551 Peptidase family M23 At1D1609_19670 PF00271 Helicase conserved C-terminal domain At1D1609_19670 PF00270 DEAD/DEAH box helicase At1D1609_19710 PF00834 Ribulose-phosphate 3 epimerase family At1D1609_19730 PF10397 Adenylosuccinate lyase C-terminus At1D1609_19730 PF00206 Lyase At1D1609_19750 PF01259 SAICAR synthetase At1D1609_19760 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase At1D1609_19800 PF00155 Aminotransferase class I and II At1D1609_19800 PF00392 Bacterial regulatory proteins, gntR family At1D1609_19820 PF00586 AIR synthase related protein, N-terminal domain At1D1609_19820 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain At1D1609_19820 PF02769 AIR synthase related protein, C-terminal domain At1D1609_19870 PF00462 Glutaredoxin At1D1609_19880 PF07690 Major Facilitator Superfamily At1D1609_19890 PF01609 Transposase DDE domain At1D1609_19900 PF00459 Inositol monophosphatase family At1D1609_19910 PF00459 Inositol monophosphatase family At1D1609_19920 PF01171 PP-loop family At1D1609_19930 PF04960 Glutaminase At1D1609_19940 PF00163 Ribosomal protein S4/S9 N-terminal domain At1D1609_19940 PF01479 S4 domain At1D1609_19950 PF03741 Integral membrane protein TerC family At1D1609_19970 PF00892 EamA-like transporter family At1D1609_19980 PF01810 LysE type translocator At1D1609_19990 PF01381 Helix-turn-helix At1D1609_20000 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB At1D1609_20030 PF01177 Asp/Glu/Hydantoin racemase At1D1609_20040 PF00588 SpoU rRNA Methylase family At1D1609_20060 PF00180 Isocitrate/isopropylmalate dehydrogenase At1D1609_20080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain At1D1609_20080 PF01411 tRNA synthetases class II (A) At1D1609_20080 PF02272 DHHA1 domain At1D1609_20090 PF00154 recA bacterial DNA recombination protein At1D1609_20100 PF00294 pfkB family carbohydrate kinase At1D1609_20110 PF04227 Indigoidine synthase A like protein At1D1609_20120 PF00691 OmpA family At1D1609_20120 PF01389 OmpA-like transmembrane domain At1D1609_20130 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_20140 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_20150 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_20160 PF06233 Usg-like family At1D1609_20180 PF09084 NMT1/THI5 like At1D1609_20190 PF13404 AsnC-type helix-turn-helix domain At1D1609_20190 PF01037 Lrp/AsnC ligand binding domain At1D1609_20200 PF03167 Uracil DNA glycosylase superfamily At1D1609_20220 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_20220 PF00989 PAS fold At1D1609_20220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_20230 PF01219 Prokaryotic diacylglycerol kinase At1D1609_20240 PF02277 Phosphoribosyltransferase At1D1609_20250 PF02654 Cobalamin-5-phosphate synthase At1D1609_20290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At1D1609_20310 PF00005 ABC transporter At1D1609_20320 PF13407 Periplasmic binding protein domain At1D1609_20330 PF02653 Branched-chain amino acid transport system / permease component At1D1609_20340 PF00456 Transketolase, thiamine diphosphate binding domain At1D1609_20350 PF02779 Transketolase, pyrimidine binding domain At1D1609_20350 PF02780 Transketolase, C-terminal domain At1D1609_20360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_20360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_20370 PF04198 Putative sugar-binding domain At1D1609_20380 PF00106 short chain dehydrogenase At1D1609_20390 PF01061 ABC-2 type transporter At1D1609_20400 PF00005 ABC transporter At1D1609_20430 PF17200 Single Cache domain 2 At1D1609_20430 PF00672 HAMP domain At1D1609_20430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_20450 PF12002 MgsA AAA+ ATPase C terminal At1D1609_20450 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_20450 PF16193 AAA C-terminal domain At1D1609_20460 PF13180 PDZ domain At1D1609_20460 PF00595 PDZ domain At1D1609_20480 PF12802 MarR family At1D1609_20520 PF00920 Dehydratase family At1D1609_20530 PF00174 Oxidoreductase molybdopterin binding domain At1D1609_20540 PF01794 Ferric reductase like transmembrane component At1D1609_20560 PF05675 Protein of unknown function (DUF817) At1D1609_20580 PF01196 Ribosomal protein L17 At1D1609_20590 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain At1D1609_20590 PF01000 RNA polymerase Rpb3/RpoA insert domain At1D1609_20590 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain At1D1609_20600 PF00411 Ribosomal protein S11 At1D1609_20610 PF00416 Ribosomal protein S13/S18 At1D1609_20630 PF00344 SecY translocase At1D1609_20640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A At1D1609_20650 PF00327 Ribosomal protein L30p/L7e At1D1609_20660 PF00333 Ribosomal protein S5, N-terminal domain At1D1609_20660 PF03719 Ribosomal protein S5, C-terminal domain At1D1609_20670 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast At1D1609_20680 PF00347 Ribosomal protein L6 At1D1609_20690 PF00410 Ribosomal protein S8 At1D1609_20700 PF00253 Ribosomal protein S14p/S29e At1D1609_20710 PF00673 ribosomal L5P family C-terminus At1D1609_20710 PF00281 Ribosomal protein L5 At1D1609_20720 PF00467 KOW motif At1D1609_20720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 At1D1609_20730 PF00238 Ribosomal protein L14p/L23e At1D1609_20740 PF00366 Ribosomal protein S17 At1D1609_20750 PF00831 Ribosomal L29 protein At1D1609_20760 PF00252 Ribosomal protein L16p/L10e At1D1609_20770 PF00189 Ribosomal protein S3, C-terminal domain At1D1609_20770 PF07650 KH domain At1D1609_20780 PF00237 Ribosomal protein L22p/L17e At1D1609_20790 PF00203 Ribosomal protein S19 At1D1609_20800 PF03947 Ribosomal Proteins L2, C-terminal domain At1D1609_20800 PF00181 Ribosomal Proteins L2, RNA binding domain At1D1609_20810 PF00276 Ribosomal protein L23 At1D1609_20820 PF00573 Ribosomal protein L4/L1 family At1D1609_20830 PF00297 Ribosomal protein L3 At1D1609_20840 PF00338 Ribosomal protein S10p/S20e At1D1609_20850 PF03143 Elongation factor Tu C-terminal domain At1D1609_20850 PF03144 Elongation factor Tu domain 2 At1D1609_20850 PF00009 Elongation factor Tu GTP binding domain At1D1609_20860 PF03764 Elongation factor G, domain IV At1D1609_20860 PF00009 Elongation factor Tu GTP binding domain At1D1609_20860 PF03144 Elongation factor Tu domain 2 At1D1609_20860 PF14492 Elongation Factor G, domain II At1D1609_20860 PF00679 Elongation factor G C-terminus At1D1609_20870 PF00177 Ribosomal protein S7p/S5e At1D1609_20880 PF00164 Ribosomal protein S12/S23 At1D1609_20920 PF04983 RNA polymerase Rpb1, domain 3 At1D1609_20920 PF04997 RNA polymerase Rpb1, domain 1 At1D1609_20920 PF04998 RNA polymerase Rpb1, domain 5 At1D1609_20920 PF05000 RNA polymerase Rpb1, domain 4 At1D1609_20920 PF00623 RNA polymerase Rpb1, domain 2 At1D1609_20930 PF04563 RNA polymerase beta subunit At1D1609_20930 PF00562 RNA polymerase Rpb2, domain 6 At1D1609_20930 PF10385 RNA polymerase beta subunit external 1 domain At1D1609_20930 PF04560 RNA polymerase Rpb2, domain 7 At1D1609_20930 PF04565 RNA polymerase Rpb2, domain 3 At1D1609_20930 PF04561 RNA polymerase Rpb2, domain 2 At1D1609_20940 PF00542 Ribosomal protein L7/L12 C-terminal domain At1D1609_20940 PF16320 Ribosomal protein L7/L12 dimerisation domain At1D1609_20950 PF00466 Ribosomal protein L10 At1D1609_20960 PF00687 Ribosomal protein L1p/L10e family At1D1609_20970 PF00298 Ribosomal protein L11, RNA binding domain At1D1609_20970 PF03946 Ribosomal protein L11, N-terminal domain At1D1609_20980 PF02357 Transcription termination factor nusG At1D1609_20980 PF00467 KOW motif At1D1609_20990 PF00584 SecE/Sec61-gamma subunits of protein translocation complex At1D1609_21000 PF00300 Histidine phosphatase superfamily (branch 1) At1D1609_21010 PF03144 Elongation factor Tu domain 2 At1D1609_21010 PF00009 Elongation factor Tu GTP binding domain At1D1609_21010 PF03143 Elongation factor Tu C-terminal domain At1D1609_21020 PF03741 Integral membrane protein TerC family At1D1609_21040 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme At1D1609_21080 PF00158 Sigma-54 interaction domain At1D1609_21080 PF00072 Response regulator receiver domain At1D1609_21080 PF02954 Bacterial regulatory protein, Fis family At1D1609_21090 PF08769 Sporulation initiation factor Spo0A C terminal At1D1609_21090 PF00072 Response regulator receiver domain At1D1609_21100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_21100 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_21100 PF00072 Response regulator receiver domain At1D1609_21100 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_21100 PF01627 Hpt domain At1D1609_21110 PF00072 Response regulator receiver domain At1D1609_21120 PF07536 HWE histidine kinase At1D1609_21120 PF13426 PAS domain At1D1609_21120 PF08447 PAS fold At1D1609_21130 PF00072 Response regulator receiver domain At1D1609_21140 PF08446 PAS fold At1D1609_21140 PF01590 GAF domain At1D1609_21140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_21140 PF00360 Phytochrome region At1D1609_21140 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_21150 PF00588 SpoU rRNA Methylase family At1D1609_21150 PF08032 RNA 2'-O ribose methyltransferase substrate binding At1D1609_21160 PF03061 Thioesterase superfamily At1D1609_21200 PF13460 NAD(P)H-binding At1D1609_21210 PF01638 HxlR-like helix-turn-helix At1D1609_21220 PF00583 Acetyltransferase (GNAT) family At1D1609_21240 PF00271 Helicase conserved C-terminal domain At1D1609_21240 PF12344 Ultra-violet resistance protein B At1D1609_21240 PF02151 UvrB/uvrC motif At1D1609_21240 PF04851 Type III restriction enzyme, res subunit At1D1609_21240 PF17757 UvrB interaction domain At1D1609_21250 PF00756 Putative esterase At1D1609_21250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1609_21290 PF00684 DnaJ central domain At1D1609_21290 PF01556 DnaJ C terminal domain At1D1609_21290 PF00226 DnaJ domain At1D1609_21320 PF17151 Periplasmic sensor domain At1D1609_21320 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_21340 PF08402 TOBE domain At1D1609_21340 PF00005 ABC transporter At1D1609_21350 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_21360 PF01547 Bacterial extracellular solute-binding protein At1D1609_21370 PF00155 Aminotransferase class I and II At1D1609_21400 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain At1D1609_21400 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain At1D1609_21410 PF00440 Bacterial regulatory proteins, tetR family At1D1609_21430 PF06719 AraC-type transcriptional regulator N-terminus At1D1609_21430 PF12833 Helix-turn-helix domain At1D1609_21440 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_21440 PF00107 Zinc-binding dehydrogenase At1D1609_21450 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_21460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ At1D1609_21480 PF13538 UvrD-like helicase C-terminal domain At1D1609_21480 PF14490 Helix-hairpin-helix containing domain At1D1609_21480 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain At1D1609_21490 PF08338 Domain of unknown function (DUF1731) At1D1609_21490 PF01370 NAD dependent epimerase/dehydratase family At1D1609_21540 PF04542 Sigma-70 region 2 At1D1609_21540 PF08281 Sigma-70, region 4 At1D1609_21570 PF00248 Aldo/keto reductase family At1D1609_21600 PF10369 Small subunit of acetolactate synthase At1D1609_21610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1609_21610 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1609_21610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1609_21650 PF13302 Acetyltransferase (GNAT) domain At1D1609_21670 PF13180 PDZ domain At1D1609_21680 PF01145 SPFH domain / Band 7 family At1D1609_21690 PF01145 SPFH domain / Band 7 family At1D1609_21700 PF00186 Dihydrofolate reductase At1D1609_21710 PF00303 Thymidylate synthase At1D1609_21770 PF02913 FAD linked oxidases, C-terminal domain At1D1609_21770 PF01565 FAD binding domain At1D1609_21780 PF00873 AcrB/AcrD/AcrF family At1D1609_21790 PF13533 Biotin-lipoyl like At1D1609_21810 PF13361 UvrD-like helicase C-terminal domain At1D1609_21810 PF00580 UvrD/REP helicase N-terminal domain At1D1609_21870 PF00857 Isochorismatase family At1D1609_21910 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_21910 PF00557 Metallopeptidase family M24 At1D1609_21940 PF02630 SCO1/SenC At1D1609_21960 PF01584 CheW-like domain At1D1609_21980 PF00929 Exonuclease At1D1609_21990 PF03466 LysR substrate binding domain At1D1609_21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_22010 PF00583 Acetyltransferase (GNAT) family At1D1609_22030 PF12826 Helix-hairpin-helix motif At1D1609_22030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain At1D1609_22030 PF03120 NAD-dependent DNA ligase OB-fold domain At1D1609_22030 PF01653 NAD-dependent DNA ligase adenylation domain At1D1609_22030 PF00533 BRCA1 C Terminus (BRCT) domain At1D1609_22040 PF02463 RecF/RecN/SMC N terminal domain At1D1609_22050 PF13525 Outer membrane lipoprotein At1D1609_22060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase At1D1609_22070 PF12327 FtsZ family, C-terminal domain At1D1609_22070 PF00091 Tubulin/FtsZ family, GTPase domain At1D1609_22080 PF02491 SHS2 domain inserted in FTSA At1D1609_22090 PF08478 POTRA domain, FtsQ-type At1D1609_22090 PF03799 Cell division protein FtsQ At1D1609_22100 PF01820 D-ala D-ala ligase N-terminus At1D1609_22100 PF07478 D-ala D-ala ligase C-terminus At1D1609_22110 PF00083 Sugar (and other) transporter At1D1609_22110 PF07690 Major Facilitator Superfamily At1D1609_22120 PF00563 EAL domain At1D1609_22120 PF03707 Bacterial signalling protein N terminal repeat At1D1609_22120 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_22120 PF13188 PAS domain At1D1609_22130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain At1D1609_22130 PF01565 FAD binding domain At1D1609_22140 PF02875 Mur ligase family, glutamate ligase domain At1D1609_22140 PF08245 Mur ligase middle domain At1D1609_22140 PF01225 Mur ligase family, catalytic domain At1D1609_22150 PF04101 Glycosyltransferase family 28 C-terminal domain At1D1609_22150 PF03033 Glycosyltransferase family 28 N-terminal domain At1D1609_22160 PF01098 Cell cycle protein At1D1609_22170 PF08245 Mur ligase middle domain At1D1609_22170 PF02875 Mur ligase family, glutamate ligase domain At1D1609_22180 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 At1D1609_22180 PF00953 Glycosyl transferase family 4 At1D1609_22190 PF01225 Mur ligase family, catalytic domain At1D1609_22190 PF02875 Mur ligase family, glutamate ligase domain At1D1609_22190 PF08245 Mur ligase middle domain At1D1609_22200 PF01225 Mur ligase family, catalytic domain At1D1609_22200 PF08245 Mur ligase middle domain At1D1609_22200 PF02875 Mur ligase family, glutamate ligase domain At1D1609_22210 PF03717 Penicillin-binding Protein dimerisation domain At1D1609_22210 PF00905 Penicillin binding protein transpeptidase domain At1D1609_22230 PF01795 MraW methylase family At1D1609_22240 PF02381 MraZ protein, putative antitoxin-like At1D1609_22300 PF01510 N-acetylmuramoyl-L-alanine amidase At1D1609_22310 PF05099 Tellurite resistance protein TerB At1D1609_22310 PF00226 DnaJ domain At1D1609_22320 PF00365 Phosphofructokinase At1D1609_22360 PF13649 Methyltransferase domain At1D1609_22370 PF01183 Glycosyl hydrolases family 25 At1D1609_22390 PF02219 Methylenetetrahydrofolate reductase At1D1609_22400 PF01209 ubiE/COQ5 methyltransferase family At1D1609_22410 PF12848 ABC transporter At1D1609_22410 PF00005 ABC transporter At1D1609_22420 PF12146 Serine aminopeptidase, S33 At1D1609_22430 PF02515 CoA-transferase family III At1D1609_22440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1609_22440 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1609_22440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1609_22490 PF01476 LysM domain At1D1609_22490 PF03734 L,D-transpeptidase catalytic domain At1D1609_22500 PF07690 Major Facilitator Superfamily At1D1609_22520 PF10609 NUBPL iron-transfer P-loop NTPase At1D1609_22530 PF00465 Iron-containing alcohol dehydrogenase At1D1609_22540 PF00171 Aldehyde dehydrogenase family At1D1609_22550 PF03951 Glutamine synthetase, beta-Grasp domain At1D1609_22550 PF00120 Glutamine synthetase, catalytic domain At1D1609_22560 PF13520 Amino acid permease At1D1609_22580 PF01380 SIS domain At1D1609_22580 PF01418 Helix-turn-helix domain, rpiR family At1D1609_22620 PF08402 TOBE domain At1D1609_22620 PF00005 ABC transporter At1D1609_22630 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_22630 PF00107 Zinc-binding dehydrogenase At1D1609_22650 PF02463 RecF/RecN/SMC N terminal domain At1D1609_22660 PF07690 Major Facilitator Superfamily At1D1609_22670 PF02607 B12 binding domain At1D1609_22670 PF02965 Vitamin B12 dependent methionine synthase, activation domain At1D1609_22670 PF00809 Pterin binding enzyme At1D1609_22670 PF02310 B12 binding domain At1D1609_22670 PF02574 Homocysteine S-methyltransferase At1D1609_22710 PF13505 Outer membrane protein beta-barrel domain At1D1609_22730 PF04402 Protein of unknown function (DUF541) At1D1609_22750 PF01894 Uncharacterised protein family UPF0047 At1D1609_22760 PF01590 GAF domain At1D1609_22760 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_22760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_22760 PF08446 PAS fold At1D1609_22760 PF00360 Phytochrome region At1D1609_22780 PF04545 Sigma-70, region 4 At1D1609_22780 PF04542 Sigma-70 region 2 At1D1609_22780 PF00140 Sigma-70 factor, region 1.2 At1D1609_22780 PF04546 Sigma-70, non-essential region At1D1609_22780 PF03979 Sigma-70 factor, region 1.1 At1D1609_22780 PF04539 Sigma-70 region 3 At1D1609_22790 PF01807 CHC2 zinc finger At1D1609_22790 PF08275 DNA primase catalytic core, N-terminal domain At1D1609_22790 PF10410 DnaB-helicase binding domain of primase At1D1609_22790 PF08278 DNA primase DnaG DnaB-binding At1D1609_22810 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain At1D1609_22810 PF00117 Glutamine amidotransferase class-I At1D1609_22820 PF01554 MatE At1D1609_22830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_22830 PF00672 HAMP domain At1D1609_22830 PF02743 Cache domain At1D1609_22850 PF04228 Putative neutral zinc metallopeptidase At1D1609_22880 PF02142 MGS-like domain At1D1609_22880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain At1D1609_22880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_22900 PF17158 Membrane-associated sensor, integral membrane domain At1D1609_22900 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_22930 PF01272 Transcription elongation factor, GreA/GreB, C-term At1D1609_22930 PF03449 Transcription elongation factor, N-terminal At1D1609_22940 PF00534 Glycosyl transferases group 1 At1D1609_22950 PF01037 Lrp/AsnC ligand binding domain At1D1609_22960 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_22970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_22970 PF03466 LysR substrate binding domain At1D1609_22990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_23020 PF03466 LysR substrate binding domain At1D1609_23040 PF01699 Sodium/calcium exchanger protein At1D1609_23060 PF05231 MASE1 At1D1609_23060 PF00563 EAL domain At1D1609_23090 PF00313 'Cold-shock' DNA-binding domain At1D1609_23100 PF00753 Metallo-beta-lactamase superfamily At1D1609_23120 PF12802 MarR family At1D1609_23130 PF00072 Response regulator receiver domain At1D1609_23130 PF00486 Transcriptional regulatory protein, C terminal At1D1609_23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_23140 PF00672 HAMP domain At1D1609_23140 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_23150 PF01588 Putative tRNA binding domain At1D1609_23160 PF14748 Pyrroline-5-carboxylate reductase dimerisation At1D1609_23160 PF03807 NADP oxidoreductase coenzyme F420-dependent At1D1609_23190 PF01790 Prolipoprotein diacylglyceryl transferase At1D1609_23220 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_23220 PF00557 Metallopeptidase family M24 At1D1609_23240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase At1D1609_23240 PF14572 Phosphoribosyl synthetase-associated domain At1D1609_23280 PF00535 Glycosyl transferase family 2 At1D1609_23290 PF00672 HAMP domain At1D1609_23290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_23300 PF00171 Aldehyde dehydrogenase family At1D1609_23310 PF02954 Bacterial regulatory protein, Fis family At1D1609_23320 PF13188 PAS domain At1D1609_23320 PF00563 EAL domain At1D1609_23320 PF03707 Bacterial signalling protein N terminal repeat At1D1609_23320 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_23330 PF14693 Ribosomal protein TL5, C-terminal domain At1D1609_23330 PF01386 Ribosomal L25p family At1D1609_23340 PF08447 PAS fold At1D1609_23340 PF08448 PAS fold At1D1609_23340 PF00563 EAL domain At1D1609_23340 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_23360 PF01195 Peptidyl-tRNA hydrolase At1D1609_23380 PF02617 ATP-dependent Clp protease adaptor protein ClpS At1D1609_23390 PF06071 Protein of unknown function (DUF933) At1D1609_23390 PF01926 50S ribosome-binding GTPase At1D1609_23420 PF00156 Phosphoribosyl transferase domain At1D1609_23440 PF00032 Cytochrome b(C-terminal)/b6/petD At1D1609_23440 PF00033 Cytochrome b/b6/petB At1D1609_23440 PF02167 Cytochrome C1 family At1D1609_23450 PF00033 Cytochrome b/b6/petB At1D1609_23450 PF00032 Cytochrome b(C-terminal)/b6/petD At1D1609_23460 PF00355 Rieske [2Fe-2S] domain At1D1609_23460 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal At1D1609_23480 PF00664 ABC transporter transmembrane region At1D1609_23480 PF00005 ABC transporter At1D1609_23490 PF00664 ABC transporter transmembrane region At1D1609_23490 PF00005 ABC transporter At1D1609_23500 PF00588 SpoU rRNA Methylase family At1D1609_23510 PF02690 Na+/Pi-cotransporter At1D1609_23530 PF01218 Coproporphyrinogen III oxidase At1D1609_23560 PF12627 Probable RNA and SrmB- binding site of polymerase A At1D1609_23560 PF13735 tRNA nucleotidyltransferase domain 2 putative At1D1609_23560 PF01743 Poly A polymerase head domain At1D1609_23570 PF00293 NUDIX domain At1D1609_23590 PF17863 AAA lid domain At1D1609_23590 PF07726 ATPase family associated with various cellular activities (AAA) At1D1609_23630 PF00583 Acetyltransferase (GNAT) family At1D1609_23640 PF03466 LysR substrate binding domain At1D1609_23640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_23660 PF07690 Major Facilitator Superfamily At1D1609_23680 PF13409 Glutathione S-transferase, N-terminal domain At1D1609_23690 PF00293 NUDIX domain At1D1609_23710 PF08502 LeuA allosteric (dimerisation) domain At1D1609_23710 PF00682 HMGL-like At1D1609_23730 PF03594 Benzoate membrane transport protein At1D1609_23750 PF06532 Negative regulator of sigma F At1D1609_23760 PF04545 Sigma-70, region 4 At1D1609_23760 PF04542 Sigma-70 region 2 At1D1609_23780 PF00574 Clp protease At1D1609_23790 PF04955 HupE / UreJ protein At1D1609_23810 PF14489 QueF-like protein At1D1609_23820 PF16916 Dimerisation domain of Zinc Transporter At1D1609_23820 PF01545 Cation efflux family At1D1609_23840 PF13458 Periplasmic binding protein At1D1609_23860 PF01022 Bacterial regulatory protein, arsR family At1D1609_23870 PF00571 CBS domain At1D1609_23870 PF00005 ABC transporter At1D1609_23880 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_23890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1609_23900 PF00265 Thymidine kinase At1D1609_23910 PF00127 Copper binding proteins, plastocyanin/azurin family At1D1609_23930 PF03472 Autoinducer binding domain At1D1609_23930 PF00196 Bacterial regulatory proteins, luxR family At1D1609_23940 PF03350 Uncharacterized protein family, UPF0114 At1D1609_23950 PF00593 TonB dependent receptor At1D1609_23950 PF07715 TonB-dependent Receptor Plug Domain At1D1609_23950 PF04886 PT repeat At1D1609_23970 PF04715 Anthranilate synthase component I, N terminal region At1D1609_23970 PF00425 chorismate binding enzyme At1D1609_23970 PF00117 Glutamine amidotransferase class-I At1D1609_23990 PF11871 Domain of unknown function (DUF3391) At1D1609_23990 PF01966 HD domain At1D1609_24000 PF01979 Amidohydrolase family At1D1609_24000 PF13382 Adenine deaminase C-terminal domain At1D1609_24010 PF00583 Acetyltransferase (GNAT) family At1D1609_24020 PF00128 Alpha amylase, catalytic domain At1D1609_24030 PF00294 pfkB family carbohydrate kinase At1D1609_24060 PF01926 50S ribosome-binding GTPase At1D1609_24060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal At1D1609_24100 PF05992 SbmA/BacA-like family At1D1609_24120 PF00557 Metallopeptidase family M24 At1D1609_24150 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_24150 PF01799 [2Fe-2S] binding domain At1D1609_24170 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At1D1609_24170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At1D1609_24200 PF03466 LysR substrate binding domain At1D1609_24200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_24230 PF01979 Amidohydrolase family At1D1609_24250 PF01070 FMN-dependent dehydrogenase At1D1609_24260 PF00893 Small Multidrug Resistance protein At1D1609_24270 PF00440 Bacterial regulatory proteins, tetR family At1D1609_24270 PF17932 Tetracyclin repressor-like, C-terminal domain At1D1609_24280 PF07943 Penicillin-binding protein 5, C-terminal domain At1D1609_24280 PF00768 D-alanyl-D-alanine carboxypeptidase At1D1609_24300 PF00576 HIUase/Transthyretin family At1D1609_24310 PF04115 Ureidoglycolate lyase At1D1609_24340 PF09349 OHCU decarboxylase At1D1609_24340 PF01014 Uricase At1D1609_24360 PF06299 Protein of unknown function (DUF1045) At1D1609_24370 PF01266 FAD dependent oxidoreductase At1D1609_24380 PF05430 S-adenosyl-L-methionine-dependent methyltransferase At1D1609_24380 PF01266 FAD dependent oxidoreductase At1D1609_24390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) At1D1609_24390 PF00672 HAMP domain At1D1609_24390 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_24390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_24390 PF00072 Response regulator receiver domain At1D1609_24390 PF01627 Hpt domain At1D1609_24400 PF00271 Helicase conserved C-terminal domain At1D1609_24400 PF00270 DEAD/DEAH box helicase At1D1609_24420 PF07681 DoxX At1D1609_24430 PF01476 LysM domain At1D1609_24430 PF03734 L,D-transpeptidase catalytic domain At1D1609_24450 PF14403 Circularly permuted ATP-grasp type 2 At1D1609_24460 PF04168 A predicted alpha-helical domain with a conserved ER motif. At1D1609_24460 PF14403 Circularly permuted ATP-grasp type 2 At1D1609_24470 PF08379 Bacterial transglutaminase-like N-terminal region At1D1609_24470 PF01841 Transglutaminase-like superfamily At1D1609_24510 PF00300 Histidine phosphatase superfamily (branch 1) At1D1609_24530 PF02653 Branched-chain amino acid transport system / permease component At1D1609_24540 PF00005 ABC transporter At1D1609_24550 PF13407 Periplasmic binding protein domain At1D1609_24560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_24560 PF03466 LysR substrate binding domain At1D1609_24610 PF00672 HAMP domain At1D1609_24610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_24620 PF02965 Vitamin B12 dependent methionine synthase, activation domain At1D1609_24620 PF00809 Pterin binding enzyme At1D1609_24620 PF02574 Homocysteine S-methyltransferase At1D1609_24620 PF02607 B12 binding domain At1D1609_24620 PF02310 B12 binding domain At1D1609_24630 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_24640 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_24650 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_24660 PF00005 ABC transporter At1D1609_24700 PF00331 Glycosyl hydrolase family 10 At1D1609_24710 PF00535 Glycosyl transferase family 2 At1D1609_24740 PF03808 Glycosyl transferase WecB/TagA/CpsF family At1D1609_24770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At1D1609_24770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At1D1609_24770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At1D1609_24770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At1D1609_24780 PF01152 Bacterial-like globin At1D1609_24820 PF08362 YcdC-like protein, C-terminal region At1D1609_24820 PF00440 Bacterial regulatory proteins, tetR family At1D1609_24830 PF07687 Peptidase dimerisation domain At1D1609_24830 PF01546 Peptidase family M20/M25/M40 At1D1609_24840 PF01979 Amidohydrolase family At1D1609_24850 PF00293 NUDIX domain At1D1609_24860 PF00005 ABC transporter At1D1609_24870 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_24880 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_24910 PF00873 AcrB/AcrD/AcrF family At1D1609_24930 PF12706 Beta-lactamase superfamily domain At1D1609_24930 PF00753 Metallo-beta-lactamase superfamily At1D1609_24940 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1609_24950 PF01730 UreF At1D1609_24960 PF02814 UreE urease accessory protein, N-terminal domain At1D1609_24960 PF05194 UreE urease accessory protein, C-terminal domain At1D1609_24970 PF08534 Redoxin At1D1609_25000 PF00449 Urease alpha-subunit, N-terminal domain At1D1609_25000 PF01979 Amidohydrolase family At1D1609_25020 PF07007 Lysozyme inhibitor LprI At1D1609_25040 PF00699 Urease beta subunit At1D1609_25050 PF06906 Protein of unknown function (DUF1272) At1D1609_25060 PF00547 Urease, gamma subunit At1D1609_25070 PF01774 UreD urease accessory protein At1D1609_25090 PF00005 ABC transporter At1D1609_25110 PF00005 ABC transporter At1D1609_25110 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1609_25130 PF02653 Branched-chain amino acid transport system / permease component At1D1609_25170 PF10931 Protein of unknown function (DUF2735) At1D1609_25180 PF03951 Glutamine synthetase, beta-Grasp domain At1D1609_25180 PF00120 Glutamine synthetase, catalytic domain At1D1609_25190 PF00106 short chain dehydrogenase At1D1609_25200 PF18415 Histidine kinase receptor ArcB trans-membrane domain At1D1609_25200 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_25200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_25200 PF00989 PAS fold At1D1609_25200 PF01627 Hpt domain At1D1609_25200 PF00072 Response regulator receiver domain At1D1609_25210 PF00072 Response regulator receiver domain At1D1609_25240 PF13458 Periplasmic binding protein At1D1609_25260 PF00005 ABC transporter At1D1609_25270 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1609_25270 PF00005 ABC transporter At1D1609_25280 PF11862 Domain of unknown function (DUF3382) At1D1609_25280 PF02653 Branched-chain amino acid transport system / permease component At1D1609_25290 PF02653 Branched-chain amino acid transport system / permease component At1D1609_25300 PF00459 Inositol monophosphatase family At1D1609_25370 PF00072 Response regulator receiver domain At1D1609_25370 PF00486 Transcriptional regulatory protein, C terminal At1D1609_25410 PF10090 Histidine phosphotransferase C-terminal domain At1D1609_25440 PF00588 SpoU rRNA Methylase family At1D1609_25460 PF00849 RNA pseudouridylate synthase At1D1609_25480 PF04545 Sigma-70, region 4 At1D1609_25480 PF00140 Sigma-70 factor, region 1.2 At1D1609_25480 PF04542 Sigma-70 region 2 At1D1609_25500 PF00709 Adenylosuccinate synthetase At1D1609_25580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_25600 PF03167 Uracil DNA glycosylase superfamily At1D1609_25610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_25620 PF04304 Protein of unknown function (DUF454) At1D1609_25630 PF00005 ABC transporter At1D1609_25640 PF01032 FecCD transport family At1D1609_25650 PF01497 Periplasmic binding protein At1D1609_25670 PF06228 Haem utilisation ChuX/HutX At1D1609_25690 PF00551 Formyl transferase At1D1609_25700 PF05973 Phage derived protein Gp49-like (DUF891) At1D1609_25720 PF00672 HAMP domain At1D1609_25720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_25720 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_25730 PF00486 Transcriptional regulatory protein, C terminal At1D1609_25730 PF00072 Response regulator receiver domain At1D1609_25750 PF03401 Tripartite tricarboxylate transporter family receptor At1D1609_25770 PF01970 Tripartite tricarboxylate transporter TctA family At1D1609_25800 PF01032 FecCD transport family At1D1609_25810 PF01032 FecCD transport family At1D1609_25820 PF00005 ABC transporter At1D1609_25830 PF00210 Ferritin-like domain At1D1609_25850 PF00248 Aldo/keto reductase family At1D1609_25860 PF07690 Major Facilitator Superfamily At1D1609_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_25870 PF03466 LysR substrate binding domain At1D1609_25880 PF03466 LysR substrate binding domain At1D1609_25880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_25900 PF13533 Biotin-lipoyl like At1D1609_25910 PF00873 AcrB/AcrD/AcrF family At1D1609_25940 PF13396 Phospholipase_D-nuclease N-terminal At1D1609_25940 PF13091 PLD-like domain At1D1609_25950 PF08543 Phosphomethylpyrimidine kinase At1D1609_25960 PF00484 Carbonic anhydrase At1D1609_25980 PF02774 Semialdehyde dehydrogenase, dimerisation domain At1D1609_25980 PF01118 Semialdehyde dehydrogenase, NAD binding domain At1D1609_25990 PF00083 Sugar (and other) transporter At1D1609_26000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At1D1609_26000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain At1D1609_26000 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch At1D1609_26010 PF02233 NAD(P) transhydrogenase beta subunit At1D1609_26020 PF01613 Flavin reductase like domain At1D1609_26030 PF00881 Nitroreductase family At1D1609_26040 PF00561 alpha/beta hydrolase fold At1D1609_26050 PF01042 Endoribonuclease L-PSP At1D1609_26060 PF00857 Isochorismatase family At1D1609_26070 PF00296 Luciferase-like monooxygenase At1D1609_26080 PF01126 Heme oxygenase At1D1609_26090 PF00701 Dihydrodipicolinate synthetase family At1D1609_26100 PF07729 FCD domain At1D1609_26100 PF00392 Bacterial regulatory proteins, gntR family At1D1609_26120 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_26130 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_26140 PF17912 MalK OB fold domain At1D1609_26140 PF00005 ABC transporter At1D1609_26140 PF03459 TOBE domain At1D1609_26150 PF00294 pfkB family carbohydrate kinase At1D1609_26160 PF03576 Peptidase family S58 At1D1609_26170 PF01063 Amino-transferase class IV At1D1609_26180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_26180 PF03466 LysR substrate binding domain At1D1609_26190 PF01609 Transposase DDE domain At1D1609_26210 PF00005 ABC transporter At1D1609_26210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_26220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_26220 PF00005 ABC transporter At1D1609_26240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_26250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_26260 PF01244 Membrane dipeptidase (Peptidase family M19) At1D1609_26280 PF09924 Uncharacterised conserved protein (DUF2156) At1D1609_26280 PF03706 Lysylphosphatidylglycerol synthase TM region At1D1609_26310 PF07690 Major Facilitator Superfamily At1D1609_26330 PF04444 Catechol dioxygenase N terminus At1D1609_26330 PF00775 Dioxygenase At1D1609_26340 PF00465 Iron-containing alcohol dehydrogenase At1D1609_26350 PF04909 Amidohydrolase At1D1609_26360 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_26360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_26370 PF01613 Flavin reductase like domain At1D1609_26400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_26410 PF08402 TOBE domain At1D1609_26410 PF00005 ABC transporter At1D1609_26420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_26450 PF00072 Response regulator receiver domain At1D1609_26450 PF00486 Transcriptional regulatory protein, C terminal At1D1609_26460 PF08448 PAS fold At1D1609_26460 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_26460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_26460 PF13188 PAS domain At1D1609_26460 PF00072 Response regulator receiver domain At1D1609_26470 PF00202 Aminotransferase class-III At1D1609_26480 PF03466 LysR substrate binding domain At1D1609_26480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_26490 PF17969 L,D-transpeptidase C-terminal domain At1D1609_26490 PF03734 L,D-transpeptidase catalytic domain At1D1609_26500 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_26500 PF08521 Two-component sensor kinase N-terminal At1D1609_26500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_26510 PF00072 Response regulator receiver domain At1D1609_26510 PF00486 Transcriptional regulatory protein, C terminal At1D1609_26520 PF11412 Disulphide bond corrector protein DsbC At1D1609_26520 PF02683 Cytochrome C biogenesis protein transmembrane region At1D1609_26530 PF13462 Thioredoxin At1D1609_26530 PF06965 Na+/H+ antiporter 1 At1D1609_26560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_26560 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_26640 PF00465 Iron-containing alcohol dehydrogenase At1D1609_26650 PF00356 Bacterial regulatory proteins, lacI family At1D1609_26670 PF00005 ABC transporter At1D1609_26680 PF02653 Branched-chain amino acid transport system / permease component At1D1609_26690 PF02126 Phosphotriesterase family At1D1609_26730 PF01546 Peptidase family M20/M25/M40 At1D1609_26730 PF07687 Peptidase dimerisation domain At1D1609_26740 PF02515 CoA-transferase family III At1D1609_26750 PF05199 GMC oxidoreductase At1D1609_26750 PF00732 GMC oxidoreductase At1D1609_26760 PF03466 LysR substrate binding domain At1D1609_26760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_26780 PF00571 CBS domain At1D1609_26780 PF00005 ABC transporter At1D1609_26860 PF03167 Uracil DNA glycosylase superfamily At1D1609_26940 PF08281 Sigma-70, region 4 At1D1609_26940 PF04542 Sigma-70 region 2 At1D1609_27000 PF05974 Domain of unknown function (DUF892) At1D1609_27010 PF06628 Catalase-related immune-responsive At1D1609_27010 PF00199 Catalase At1D1609_27010 PF18011 C-terminal domain found in long catalases At1D1609_27040 PF01566 Natural resistance-associated macrophage protein At1D1609_27040 PF03358 NADPH-dependent FMN reductase At1D1609_27060 PF00106 short chain dehydrogenase At1D1609_27070 PF02798 Glutathione S-transferase, N-terminal domain At1D1609_27080 PF00873 AcrB/AcrD/AcrF family At1D1609_27090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_27090 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_27100 PF00440 Bacterial regulatory proteins, tetR family At1D1609_27110 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_27110 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_27120 PF12327 FtsZ family, C-terminal domain At1D1609_27120 PF00091 Tubulin/FtsZ family, GTPase domain At1D1609_27160 PF01259 SAICAR synthetase At1D1609_27180 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_27180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_27190 PF00873 AcrB/AcrD/AcrF family At1D1609_27200 PF02321 Outer membrane efflux protein At1D1609_27210 PF01132 Elongation factor P (EF-P) OB domain At1D1609_27210 PF08207 Elongation factor P (EF-P) KOW-like domain At1D1609_27210 PF09285 Elongation factor P, C-terminal At1D1609_27220 PF00152 tRNA synthetases class II (D, K and N) At1D1609_27230 PF04055 Radical SAM superfamily At1D1609_27230 PF12544 Lysine-2,3-aminomutase At1D1609_27260 PF03466 LysR substrate binding domain At1D1609_27260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_27270 PF01266 FAD dependent oxidoreductase At1D1609_27290 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_27300 PF00005 ABC transporter At1D1609_27300 PF03459 TOBE domain At1D1609_27320 PF03576 Peptidase family S58 At1D1609_27330 PF05690 Thiazole biosynthesis protein ThiG At1D1609_27350 PF01266 FAD dependent oxidoreductase At1D1609_27360 PF13667 ThiC-associated domain At1D1609_27360 PF01964 Radical SAM ThiC family At1D1609_27370 PF00550 Phosphopantetheine attachment site At1D1609_27430 PF00005 ABC transporter At1D1609_27430 PF00664 ABC transporter transmembrane region At1D1609_27440 PF13545 Crp-like helix-turn-helix domain At1D1609_27440 PF00027 Cyclic nucleotide-binding domain At1D1609_27460 PF00211 Adenylate and Guanylate cyclase catalytic domain At1D1609_27460 PF00672 HAMP domain At1D1609_27480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At1D1609_27480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At1D1609_27480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At1D1609_27520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_27520 PF00005 ABC transporter At1D1609_27530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_27540 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_27550 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_27550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_27570 PF13439 Glycosyltransferase Family 4 At1D1609_27570 PF00534 Glycosyl transferases group 1 At1D1609_27580 PF04101 Glycosyltransferase family 28 C-terminal domain At1D1609_27580 PF03033 Glycosyltransferase family 28 N-terminal domain At1D1609_27590 PF03932 CutC family At1D1609_27600 PF07690 Major Facilitator Superfamily At1D1609_27620 PF00728 Glycosyl hydrolase family 20, catalytic domain At1D1609_27620 PF02838 Glycosyl hydrolase family 20, domain 2 At1D1609_27640 PF01418 Helix-turn-helix domain, rpiR family At1D1609_27640 PF01380 SIS domain At1D1609_27660 PF17912 MalK OB fold domain At1D1609_27660 PF00005 ABC transporter At1D1609_27670 PF01547 Bacterial extracellular solute-binding protein At1D1609_27680 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_27690 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_27720 PF01380 SIS domain At1D1609_27730 PF01979 Amidohydrolase family At1D1609_27740 PF00480 ROK family At1D1609_27750 PF01494 FAD binding domain At1D1609_27760 PF01569 PAP2 superfamily At1D1609_27770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase At1D1609_27770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain At1D1609_27770 PF13288 DXP reductoisomerase C-terminal domain At1D1609_27780 PF00155 Aminotransferase class I and II At1D1609_27800 PF17243 POTRA domain TamA domain 1 At1D1609_27800 PF07244 Surface antigen variable number repeat At1D1609_27800 PF01103 Surface antigen At1D1609_27820 PF01584 CheW-like domain At1D1609_27830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_27830 PF13426 PAS domain At1D1609_27830 PF08447 PAS fold At1D1609_27840 PF02634 FdhD/NarQ family At1D1609_27850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain At1D1609_27860 PF02874 ATP synthase alpha/beta family, beta-barrel domain At1D1609_27860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1609_27870 PF00231 ATP synthase At1D1609_27880 PF02874 ATP synthase alpha/beta family, beta-barrel domain At1D1609_27880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1609_27880 PF00306 ATP synthase alpha/beta chain, C terminal domain At1D1609_27890 PF00213 ATP synthase delta (OSCP) subunit At1D1609_27910 PF17764 3′ DNA-binding domain (3′BD) At1D1609_27910 PF00270 DEAD/DEAH box helicase At1D1609_27910 PF18319 PriA DNA helicase Cys-rich region (CRR) domain At1D1609_27910 PF18074 Primosomal protein N C-terminal domain At1D1609_27920 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_27920 PF00589 Phage integrase family At1D1609_27960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1609_27960 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_27970 PF01810 LysE type translocator At1D1609_27990 PF02817 e3 binding domain At1D1609_27990 PF00364 Biotin-requiring enzyme At1D1609_27990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At1D1609_28000 PF16870 2-oxoglutarate dehydrogenase C-terminal At1D1609_28000 PF00676 Dehydrogenase E1 component At1D1609_28000 PF16078 2-oxoglutarate dehydrogenase N-terminus At1D1609_28000 PF02779 Transketolase, pyrimidine binding domain At1D1609_28010 PF02629 CoA binding domain At1D1609_28010 PF00549 CoA-ligase At1D1609_28020 PF00549 CoA-ligase At1D1609_28020 PF08442 ATP-grasp domain At1D1609_28030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain At1D1609_28030 PF00056 lactate/malate dehydrogenase, NAD binding domain At1D1609_28040 PF03969 AFG1-like ATPase At1D1609_28050 PF02974 Protease inhibitor Inh At1D1609_28060 PF13085 2Fe-2S iron-sulfur cluster binding domain At1D1609_28060 PF13237 4Fe-4S dicluster domain At1D1609_28070 PF00890 FAD binding domain At1D1609_28070 PF02910 Fumarate reductase flavoprotein C-term At1D1609_28090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit At1D1609_28140 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus At1D1609_28140 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus At1D1609_28150 PF00814 Glycoprotease family At1D1609_28160 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain At1D1609_28160 PF03900 Porphobilinogen deaminase, C-terminal domain At1D1609_28210 PF00117 Glutamine amidotransferase class-I At1D1609_28230 PF02325 YGGT family At1D1609_28240 PF02594 Uncharacterised ACR, YggU family COG1872 At1D1609_28250 PF00719 Inorganic pyrophosphatase At1D1609_28280 PF01432 Peptidase family M3 At1D1609_28290 PF01047 MarR family At1D1609_28300 PF07690 Major Facilitator Superfamily At1D1609_28310 PF00764 Arginosuccinate synthase At1D1609_28320 PF00106 short chain dehydrogenase At1D1609_28330 PF01810 LysE type translocator At1D1609_28340 PF00005 ABC transporter At1D1609_28350 PF02653 Branched-chain amino acid transport system / permease component At1D1609_28370 PF04055 Radical SAM superfamily At1D1609_28400 PF01329 Pterin 4 alpha carbinolamine dehydratase At1D1609_28410 PF01451 Low molecular weight phosphotyrosine protein phosphatase At1D1609_28420 PF02834 LigT like Phosphoesterase At1D1609_28430 PF13472 GDSL-like Lipase/Acylhydrolase family At1D1609_28440 PF00005 ABC transporter At1D1609_28460 PF01027 Inhibitor of apoptosis-promoting Bax1 At1D1609_28490 PF00330 Aconitase family (aconitate hydratase) At1D1609_28490 PF00694 Aconitase C-terminal domain At1D1609_28500 PF00005 ABC transporter At1D1609_28510 PF03379 CcmB protein At1D1609_28520 PF01578 Cytochrome C assembly protein At1D1609_28540 PF08534 Redoxin At1D1609_28550 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_28560 PF10755 Protein of unknown function (DUF2585) At1D1609_28570 PF04279 Intracellular septation protein A At1D1609_28580 PF02881 SRP54-type protein, helical bundle domain At1D1609_28580 PF00448 SRP54-type protein, GTPase domain At1D1609_28590 PF04055 Radical SAM superfamily At1D1609_28590 PF00919 Uncharacterized protein family UPF0004 At1D1609_28600 PF01678 Diaminopimelate epimerase At1D1609_28610 PF12706 Beta-lactamase superfamily domain At1D1609_28620 PF02978 Signal peptide binding domain At1D1609_28620 PF02881 SRP54-type protein, helical bundle domain At1D1609_28620 PF00448 SRP54-type protein, GTPase domain At1D1609_28630 PF01817 Chorismate mutase type II At1D1609_28630 PF02153 Prephenate dehydrogenase At1D1609_28640 PF00886 Ribosomal protein S16 At1D1609_28650 PF05239 PRC-barrel domain At1D1609_28650 PF01782 RimM N-terminal domain At1D1609_28660 PF01746 tRNA (Guanine-1)-methyltransferase At1D1609_28680 PF01245 Ribosomal protein L19 At1D1609_28690 PF00664 ABC transporter transmembrane region At1D1609_28690 PF00005 ABC transporter At1D1609_28700 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_28700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_28720 PF07690 Major Facilitator Superfamily At1D1609_28740 PF00330 Aconitase family (aconitate hydratase) At1D1609_28750 PF01435 Peptidase family M48 At1D1609_28760 PF00005 ABC transporter At1D1609_28770 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_28780 PF01547 Bacterial extracellular solute-binding protein At1D1609_28820 PF04204 Homoserine O-succinyltransferase At1D1609_28830 PF01263 Aldose 1-epimerase At1D1609_28840 PF00912 Transglycosylase At1D1609_28850 PF00348 Polyprenyl synthetase At1D1609_28860 PF00691 OmpA family At1D1609_28860 PF13488 Glycine zipper At1D1609_28870 PF04551 GcpE protein At1D1609_28880 PF07690 Major Facilitator Superfamily At1D1609_28890 PF08220 DeoR-like helix-turn-helix domain At1D1609_28890 PF00455 DeoR C terminal sensor domain At1D1609_28900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_28900 PF00682 HMGL-like At1D1609_28900 PF02785 Biotin carboxylase C-terminal domain At1D1609_28900 PF00289 Biotin carboxylase, N-terminal domain At1D1609_28900 PF02436 Conserved carboxylase domain At1D1609_28900 PF00364 Biotin-requiring enzyme At1D1609_28910 PF00196 Bacterial regulatory proteins, luxR family At1D1609_28910 PF00072 Response regulator receiver domain At1D1609_28920 PF00664 ABC transporter transmembrane region At1D1609_28920 PF00005 ABC transporter At1D1609_28940 PF06165 Glycosyltransferase family 36 At1D1609_28940 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain At1D1609_28940 PF10091 Putative glucoamylase At1D1609_28950 PF01546 Peptidase family M20/M25/M40 At1D1609_28950 PF07687 Peptidase dimerisation domain At1D1609_28970 PF01266 FAD dependent oxidoreductase At1D1609_28980 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_28990 PF00920 Dehydratase family At1D1609_29000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1609_29000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1609_29010 PF01370 NAD dependent epimerase/dehydratase family At1D1609_29020 PF01565 FAD binding domain At1D1609_29020 PF02913 FAD linked oxidases, C-terminal domain At1D1609_29030 PF07729 FCD domain At1D1609_29030 PF00392 Bacterial regulatory proteins, gntR family At1D1609_29050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_29060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_29070 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_29080 PF00501 AMP-binding enzyme At1D1609_29080 PF16177 Acetyl-coenzyme A synthetase N-terminus At1D1609_29080 PF13193 AMP-binding enzyme C-terminal domain At1D1609_29100 PF01168 Alanine racemase, N-terminal domain At1D1609_29110 PF13603 Leucyl-tRNA synthetase, Domain 2 At1D1609_29110 PF00133 tRNA synthetases class I (I, L, M and V) At1D1609_29110 PF08264 Anticodon-binding domain of tRNA At1D1609_29140 PF00037 4Fe-4S binding domain At1D1609_29140 PF11953 Domain of unknown function (DUF3470) At1D1609_29150 PF00579 tRNA synthetases class I (W and Y) At1D1609_29150 PF01479 S4 domain At1D1609_29170 PF01494 FAD binding domain At1D1609_29190 PF00543 Nitrogen regulatory protein P-II At1D1609_29200 PF00909 Ammonium Transporter Family At1D1609_29210 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At1D1609_29210 PF01580 FtsK/SpoIIIE family At1D1609_29210 PF17854 FtsK alpha domain At1D1609_29210 PF09397 Ftsk gamma domain At1D1609_29220 PF03548 Outer membrane lipoprotein carrier protein LolA At1D1609_29250 PF00486 Transcriptional regulatory protein, C terminal At1D1609_29250 PF00072 Response regulator receiver domain At1D1609_29270 PF02559 CarD-like/TRCF domain At1D1609_29280 PF05088 Bacterial NAD-glutamate dehydrogenase At1D1609_29290 PF11700 Vacuole effluxer Atg22 like At1D1609_29300 PF07879 PHB/PHA accumulation regulator DNA-binding domain At1D1609_29300 PF05233 PHB accumulation regulatory domain At1D1609_29310 PF02803 Thiolase, C-terminal domain At1D1609_29310 PF00108 Thiolase, N-terminal domain At1D1609_29340 PF00210 Ferritin-like domain At1D1609_29350 PF00293 NUDIX domain At1D1609_29360 PF04748 Divergent polysaccharide deacetylase At1D1609_29370 PF13180 PDZ domain At1D1609_29370 PF03572 Peptidase family S41 At1D1609_29390 PF02590 Predicted SPOUT methyltransferase At1D1609_29410 PF01467 Cytidylyltransferase-like At1D1609_29420 PF00171 Aldehyde dehydrogenase family At1D1609_29430 PF00696 Amino acid kinase family At1D1609_29430 PF01472 PUA domain At1D1609_29440 PF01926 50S ribosome-binding GTPase At1D1609_29440 PF01018 GTP1/OBG At1D1609_29450 PF13302 Acetyltransferase (GNAT) domain At1D1609_29470 PF01016 Ribosomal L27 protein At1D1609_29480 PF00829 Ribosomal prokaryotic L21 protein At1D1609_29510 PF03328 HpcH/HpaI aldolase/citrate lyase family At1D1609_29530 PF00694 Aconitase C-terminal domain At1D1609_29540 PF00180 Isocitrate/isopropylmalate dehydrogenase At1D1609_29550 PF03150 Di-haem cytochrome c peroxidase At1D1609_29560 PF07685 CobB/CobQ-like glutamine amidotransferase domain At1D1609_29560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1609_29570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_29580 PF01888 CbiD At1D1609_29590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_29610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_29620 PF02571 Precorrin-6x reductase CbiJ/CobK At1D1609_29630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_29640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_29650 PF02570 Precorrin-8X methylmutase At1D1609_29660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At1D1609_29670 PF02514 CobN/Magnesium Chelatase At1D1609_29680 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1609_29680 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1609_29700 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP At1D1609_29700 PF12557 Cob(I)alamin adenosyltransferase N terminal At1D1609_29710 PF07685 CobB/CobQ-like glutamine amidotransferase domain At1D1609_29710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1609_29720 PF03186 CobD/Cbib protein At1D1609_29730 PF00155 Aminotransferase class I and II At1D1609_29740 PF13378 Enolase C-terminal domain-like At1D1609_29740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_29750 PF05336 L-rhamnose mutarotase At1D1609_29760 PF01232 Mannitol dehydrogenase Rossmann domain At1D1609_29760 PF08125 Mannitol dehydrogenase C-terminal domain At1D1609_29770 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_29770 PF00107 Zinc-binding dehydrogenase At1D1609_29790 PF00248 Aldo/keto reductase family At1D1609_29810 PF02653 Branched-chain amino acid transport system / permease component At1D1609_29820 PF00005 ABC transporter At1D1609_29830 PF00392 Bacterial regulatory proteins, gntR family At1D1609_29830 PF07729 FCD domain At1D1609_29840 PF08666 SAF domain At1D1609_29840 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus At1D1609_29850 PF02142 MGS-like domain At1D1609_29850 PF01808 AICARFT/IMPCHase bienzyme At1D1609_29870 PF01189 16S rRNA methyltransferase RsmB/F At1D1609_29870 PF01029 NusB family At1D1609_29880 PF01435 Peptidase family M48 At1D1609_29900 PF02195 ParB-like nuclease domain At1D1609_29900 PF17762 HTH domain found in ParB protein At1D1609_29910 PF13614 AAA domain At1D1609_29920 PF02527 rRNA small subunit methyltransferase G At1D1609_29930 PF13932 GidA associated domain At1D1609_29930 PF01134 Glucose inhibited division protein A At1D1609_29940 PF10396 GTP-binding protein TrmE N-terminus At1D1609_29940 PF12631 MnmE helical domain At1D1609_29940 PF01926 50S ribosome-binding GTPase At1D1609_29950 PF07498 Rho termination factor, N-terminal domain At1D1609_29950 PF07497 Rho termination factor, RNA-binding domain At1D1609_29950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain At1D1609_29970 PF01208 Uroporphyrinogen decarboxylase (URO-D) At1D1609_30010 PF01757 Acyltransferase family At1D1609_30030 PF01757 Acyltransferase family At1D1609_30080 PF17991 Thioredoxin like C-terminal domain At1D1609_30080 PF00578 AhpC/TSA family At1D1609_30080 PF02683 Cytochrome C biogenesis protein transmembrane region At1D1609_30100 PF00561 alpha/beta hydrolase fold At1D1609_30110 PF00072 Response regulator receiver domain At1D1609_30110 PF00486 Transcriptional regulatory protein, C terminal At1D1609_30120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_30120 PF00672 HAMP domain At1D1609_30120 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_30130 PF02566 OsmC-like protein At1D1609_30140 PF00171 Aldehyde dehydrogenase family At1D1609_30160 PF00561 alpha/beta hydrolase fold At1D1609_30170 PF00210 Ferritin-like domain At1D1609_30180 PF00384 Molybdopterin oxidoreductase At1D1609_30190 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_30190 PF08448 PAS fold At1D1609_30190 PF13426 PAS domain At1D1609_30190 PF00072 Response regulator receiver domain At1D1609_30190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_30200 PF00072 Response regulator receiver domain At1D1609_30200 PF00196 Bacterial regulatory proteins, luxR family At1D1609_30210 PF00196 Bacterial regulatory proteins, luxR family At1D1609_30210 PF00072 Response regulator receiver domain At1D1609_30230 PF00190 Cupin At1D1609_30240 PF01494 FAD binding domain At1D1609_30260 PF13460 NAD(P)H-binding At1D1609_30270 PF01527 Transposase At1D1609_30280 PF13276 HTH-like domain At1D1609_30280 PF13683 Integrase core domain At1D1609_30290 PF00860 Permease family At1D1609_30300 PF00144 Beta-lactamase At1D1609_30310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_30310 PF03466 LysR substrate binding domain At1D1609_30380 PF01177 Asp/Glu/Hydantoin racemase At1D1609_30390 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30420 PF00005 ABC transporter At1D1609_30420 PF08402 TOBE domain At1D1609_30470 PF08447 PAS fold At1D1609_30470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_30470 PF13426 PAS domain At1D1609_30490 PF13416 Bacterial extracellular solute-binding protein At1D1609_30500 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30510 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30520 PF17912 MalK OB fold domain At1D1609_30520 PF00005 ABC transporter At1D1609_30530 PF00296 Luciferase-like monooxygenase At1D1609_30540 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30570 PF17912 MalK OB fold domain At1D1609_30570 PF00005 ABC transporter At1D1609_30580 PF06964 Alpha-L-arabinofuranosidase C-terminal domain At1D1609_30610 PF00356 Bacterial regulatory proteins, lacI family At1D1609_30630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_30630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_30630 PF01842 ACT domain At1D1609_30640 PF01261 Xylose isomerase-like TIM barrel At1D1609_30650 PF01609 Transposase DDE domain At1D1609_30660 PF00005 ABC transporter At1D1609_30660 PF03459 TOBE domain At1D1609_30660 PF17912 MalK OB fold domain At1D1609_30670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30680 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30690 PF13416 Bacterial extracellular solute-binding protein At1D1609_30700 PF00440 Bacterial regulatory proteins, tetR family At1D1609_30700 PF17938 Tetracyclin repressor-like, C-terminal domain At1D1609_30710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_30710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_30740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_30740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_30770 PF00313 'Cold-shock' DNA-binding domain At1D1609_30830 PF00550 Phosphopantetheine attachment site At1D1609_30840 PF12704 MacB-like periplasmic core domain At1D1609_30840 PF02687 FtsX-like permease family At1D1609_30840 PF00005 ABC transporter At1D1609_30850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_30880 PF00486 Transcriptional regulatory protein, C terminal At1D1609_30880 PF00072 Response regulator receiver domain At1D1609_30890 PF00672 HAMP domain At1D1609_30890 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_30890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_30900 PF07470 Glycosyl Hydrolase Family 88 At1D1609_30910 PF00295 Glycosyl hydrolases family 28 At1D1609_30940 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30950 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_30960 PF02311 AraC-like ligand binding domain At1D1609_30960 PF12833 Helix-turn-helix domain At1D1609_30970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_30990 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_31000 PF04909 Amidohydrolase At1D1609_31010 PF13378 Enolase C-terminal domain-like At1D1609_31010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_31020 PF00701 Dihydrodipicolinate synthetase family At1D1609_31040 PF04962 KduI/IolB family At1D1609_31050 PF01370 NAD dependent epimerase/dehydratase family At1D1609_31060 PF00392 Bacterial regulatory proteins, gntR family At1D1609_31060 PF07729 FCD domain At1D1609_31080 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_31080 PF00557 Metallopeptidase family M24 At1D1609_31090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_31090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_31100 PF17912 MalK OB fold domain At1D1609_31100 PF00005 ABC transporter At1D1609_31110 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31120 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31130 PF13416 Bacterial extracellular solute-binding protein At1D1609_31150 PF12833 Helix-turn-helix domain At1D1609_31150 PF02311 AraC-like ligand binding domain At1D1609_31160 PF07690 Major Facilitator Superfamily At1D1609_31170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_31170 PF03466 LysR substrate binding domain At1D1609_31180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_31200 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_31210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1609_31210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1609_31240 PF00356 Bacterial regulatory proteins, lacI family At1D1609_31250 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_31250 PF16912 Glucose dehydrogenase C-terminus At1D1609_31280 PF00294 pfkB family carbohydrate kinase At1D1609_31290 PF08013 Tagatose 6 phosphate kinase At1D1609_31300 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31320 PF08402 TOBE domain At1D1609_31320 PF00005 ABC transporter At1D1609_31330 PF00005 ABC transporter At1D1609_31330 PF17912 MalK OB fold domain At1D1609_31340 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31370 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_31400 PF01297 Zinc-uptake complex component A periplasmic At1D1609_31410 PF00950 ABC 3 transport family At1D1609_31420 PF00005 ABC transporter At1D1609_31430 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1609_31430 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1609_31460 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1609_31460 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1609_31470 PF13416 Bacterial extracellular solute-binding protein At1D1609_31480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31490 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31500 PF08402 TOBE domain At1D1609_31500 PF00005 ABC transporter At1D1609_31520 PF03922 OmpW family At1D1609_31560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At1D1609_31560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1609_31570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_31570 PF03466 LysR substrate binding domain At1D1609_31580 PF13407 Periplasmic binding protein domain At1D1609_31590 PF02653 Branched-chain amino acid transport system / permease component At1D1609_31600 PF00005 ABC transporter At1D1609_31610 PF08361 MAATS-type transcriptional repressor, C-terminal region At1D1609_31610 PF00440 Bacterial regulatory proteins, tetR family At1D1609_31620 PF00873 AcrB/AcrD/AcrF family At1D1609_31630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_31630 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_31640 PF17151 Periplasmic sensor domain At1D1609_31640 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_31650 PF05899 Protein of unknown function (DUF861) At1D1609_31650 PF07883 Cupin domain At1D1609_31670 PF08448 PAS fold At1D1609_31670 PF08447 PAS fold At1D1609_31670 PF00563 EAL domain At1D1609_31670 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_31680 PF02615 Malate/L-lactate dehydrogenase At1D1609_31690 PF13491 4TM region of DNA translocase FtsK/SpoIIIE At1D1609_31690 PF17854 FtsK alpha domain At1D1609_31690 PF01580 FtsK/SpoIIIE family At1D1609_31690 PF09397 Ftsk gamma domain At1D1609_31700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_31710 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31720 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31730 PF00005 ABC transporter At1D1609_31730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_31740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_31740 PF00005 ABC transporter At1D1609_31750 PF00266 Aminotransferase class-V At1D1609_31770 PF12833 Helix-turn-helix domain At1D1609_31780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_31790 PF00920 Dehydratase family At1D1609_31800 PF13407 Periplasmic binding protein domain At1D1609_31810 PF00005 ABC transporter At1D1609_31820 PF02653 Branched-chain amino acid transport system / permease component At1D1609_31830 PF02653 Branched-chain amino acid transport system / permease component At1D1609_31840 PF07729 FCD domain At1D1609_31840 PF00392 Bacterial regulatory proteins, gntR family At1D1609_31850 PF07690 Major Facilitator Superfamily At1D1609_31870 PF01336 OB-fold nucleic acid binding domain At1D1609_31870 PF02811 PHP domain At1D1609_31870 PF14579 Helix-hairpin-helix motif At1D1609_31870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1609_31870 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1609_31910 PF05161 MOFRL family At1D1609_31910 PF13660 Domain of unknown function (DUF4147) At1D1609_31930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_31930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_31950 PF00005 ABC transporter At1D1609_31950 PF03459 TOBE domain At1D1609_31950 PF17912 MalK OB fold domain At1D1609_31960 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31970 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_31980 PF01547 Bacterial extracellular solute-binding protein At1D1609_32000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_32020 PF01425 Amidase At1D1609_32030 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_32030 PF08447 PAS fold At1D1609_32030 PF00563 EAL domain At1D1609_32030 PF08448 PAS fold At1D1609_32060 PF03776 Septum formation topological specificity factor MinE At1D1609_32070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1609_32080 PF05209 Septum formation inhibitor MinC, N-terminal domain At1D1609_32080 PF03775 Septum formation inhibitor MinC, C-terminal domain At1D1609_32090 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_32100 PF01609 Transposase DDE domain At1D1609_32110 PF00392 Bacterial regulatory proteins, gntR family At1D1609_32110 PF07729 FCD domain At1D1609_32120 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_32140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_32150 PF00107 Zinc-binding dehydrogenase At1D1609_32150 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_32160 PF03786 D-mannonate dehydratase (UxuA) At1D1609_32180 PF00171 Aldehyde dehydrogenase family At1D1609_32200 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_32210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_32220 PF00296 Luciferase-like monooxygenase At1D1609_32250 PF02798 Glutathione S-transferase, N-terminal domain At1D1609_32250 PF00043 Glutathione S-transferase, C-terminal domain At1D1609_32260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_32260 PF00005 ABC transporter At1D1609_32270 PF03841 L-seryl-tRNA selenium transferase At1D1609_32300 PF01979 Amidohydrolase family At1D1609_32310 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_32310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_32320 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_32330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_32340 PF00534 Glycosyl transferases group 1 At1D1609_32340 PF13439 Glycosyltransferase Family 4 At1D1609_32350 PF02563 Polysaccharide biosynthesis/export protein At1D1609_32360 PF13533 Biotin-lipoyl like At1D1609_32370 PF00873 AcrB/AcrD/AcrF family At1D1609_32400 PF01613 Flavin reductase like domain At1D1609_32410 PF00248 Aldo/keto reductase family At1D1609_32420 PF00296 Luciferase-like monooxygenase At1D1609_32450 PF01547 Bacterial extracellular solute-binding protein At1D1609_32460 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_32470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_32480 PF01055 Glycosyl hydrolases family 31 At1D1609_32500 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_32510 PF09084 NMT1/THI5 like At1D1609_32520 PF02110 Hydroxyethylthiazole kinase family At1D1609_32530 PF02581 Thiamine monophosphate synthase At1D1609_32540 PF08543 Phosphomethylpyrimidine kinase At1D1609_32550 PF01037 Lrp/AsnC ligand binding domain At1D1609_32560 PF01168 Alanine racemase, N-terminal domain At1D1609_32560 PF00842 Alanine racemase, C-terminal domain At1D1609_32570 PF01266 FAD dependent oxidoreductase At1D1609_32600 PF00072 Response regulator receiver domain At1D1609_32600 PF02954 Bacterial regulatory protein, Fis family At1D1609_32600 PF00158 Sigma-54 interaction domain At1D1609_32610 PF02743 Cache domain At1D1609_32610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_32610 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_32620 PF00375 Sodium:dicarboxylate symporter family At1D1609_32630 PF00892 EamA-like transporter family At1D1609_32640 PF00202 Aminotransferase class-III At1D1609_32690 PF01270 Glycosyl hydrolases family 8 At1D1609_32710 PF00535 Glycosyl transferase family 2 At1D1609_32710 PF07238 PilZ domain At1D1609_32710 PF03552 Cellulose synthase At1D1609_32770 PF16363 GDP-mannose 4,6 dehydratase At1D1609_32780 PF16363 GDP-mannose 4,6 dehydratase At1D1609_32800 PF00196 Bacterial regulatory proteins, luxR family At1D1609_32830 PF00005 ABC transporter At1D1609_32830 PF00664 ABC transporter transmembrane region At1D1609_32840 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_32870 PF02563 Polysaccharide biosynthesis/export protein At1D1609_32880 PF02397 Bacterial sugar transferase At1D1609_32900 PF00202 Aminotransferase class-III At1D1609_32910 PF00672 HAMP domain At1D1609_32910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_32920 PF17969 L,D-transpeptidase C-terminal domain At1D1609_32920 PF03734 L,D-transpeptidase catalytic domain At1D1609_32960 PF02245 Methylpurine-DNA glycosylase (MPG) At1D1609_32980 PF00356 Bacterial regulatory proteins, lacI family At1D1609_32990 PF01547 Bacterial extracellular solute-binding protein At1D1609_33000 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33010 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33020 PF17912 MalK OB fold domain At1D1609_33020 PF00005 ABC transporter At1D1609_33020 PF03459 TOBE domain At1D1609_33040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_33040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_33050 PF04055 Radical SAM superfamily At1D1609_33060 PF01242 6-pyruvoyl tetrahydropterin synthase At1D1609_33070 PF06508 Queuosine biosynthesis protein QueC At1D1609_33090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_33090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_33110 PF17912 MalK OB fold domain At1D1609_33110 PF00005 ABC transporter At1D1609_33120 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33140 PF01547 Bacterial extracellular solute-binding protein At1D1609_33160 PF00483 Nucleotidyl transferase At1D1609_33160 PF01050 Mannose-6-phosphate isomerase At1D1609_33170 PF00390 Malic enzyme, N-terminal domain At1D1609_33170 PF03949 Malic enzyme, NAD binding domain At1D1609_33170 PF01515 Phosphate acetyl/butaryl transferase At1D1609_33190 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_33200 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33210 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33220 PF00005 ABC transporter At1D1609_33230 PF03972 MmgE/PrpD family At1D1609_33250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_33250 PF13426 PAS domain At1D1609_33250 PF08447 PAS fold At1D1609_33260 PF01266 FAD dependent oxidoreductase At1D1609_33300 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_33310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_33320 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_33330 PF07722 Peptidase C26 At1D1609_33340 PF02653 Branched-chain amino acid transport system / permease component At1D1609_33350 PF00005 ABC transporter At1D1609_33360 PF13407 Periplasmic binding protein domain At1D1609_33370 PF01546 Peptidase family M20/M25/M40 At1D1609_33380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_33400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_33400 PF00005 ABC transporter At1D1609_33420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33430 PF03466 LysR substrate binding domain At1D1609_33430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_33440 PF01112 Asparaginase At1D1609_33470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_33500 PF00005 ABC transporter At1D1609_33500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_33520 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33530 PF00072 Response regulator receiver domain At1D1609_33530 PF00196 Bacterial regulatory proteins, luxR family At1D1609_33540 PF03737 Aldolase/RraA At1D1609_33550 PF01370 NAD dependent epimerase/dehydratase family At1D1609_33560 PF00920 Dehydratase family At1D1609_33570 PF08402 TOBE domain At1D1609_33570 PF00005 ABC transporter At1D1609_33580 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33590 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_33610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_33620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_33620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_33630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_33630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_33640 PF00392 Bacterial regulatory proteins, gntR family At1D1609_33640 PF07729 FCD domain At1D1609_33660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_33660 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_33670 PF00664 ABC transporter transmembrane region At1D1609_33670 PF00005 ABC transporter At1D1609_33710 PF08281 Sigma-70, region 4 At1D1609_33710 PF04542 Sigma-70 region 2 At1D1609_33710 PF12680 SnoaL-like domain At1D1609_33720 PF00005 ABC transporter At1D1609_33730 PF01032 FecCD transport family At1D1609_33760 PF01209 ubiE/COQ5 methyltransferase family At1D1609_33770 PF00127 Copper binding proteins, plastocyanin/azurin family At1D1609_33780 PF00005 ABC transporter At1D1609_33790 PF01032 FecCD transport family At1D1609_33820 PF01546 Peptidase family M20/M25/M40 At1D1609_33820 PF07687 Peptidase dimerisation domain At1D1609_33830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_33860 PF01968 Hydantoinase/oxoprolinase At1D1609_33860 PF05378 Hydantoinase/oxoprolinase N-terminal region At1D1609_33880 PF00171 Aldehyde dehydrogenase family At1D1609_33890 PF00180 Isocitrate/isopropylmalate dehydrogenase At1D1609_33900 PF00171 Aldehyde dehydrogenase family At1D1609_33910 PF01266 FAD dependent oxidoreductase At1D1609_33940 PF00202 Aminotransferase class-III At1D1609_33960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_33970 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33980 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_33980 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_33990 PF00005 ABC transporter At1D1609_33990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_34000 PF01037 Lrp/AsnC ligand binding domain At1D1609_34010 PF01266 FAD dependent oxidoreductase At1D1609_34020 PF01266 FAD dependent oxidoreductase At1D1609_34030 PF04324 BFD-like [2Fe-2S] binding domain At1D1609_34030 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_34050 PF03466 LysR substrate binding domain At1D1609_34050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_34080 PF00005 ABC transporter At1D1609_34100 PF01546 Peptidase family M20/M25/M40 At1D1609_34100 PF07687 Peptidase dimerisation domain At1D1609_34110 PF00296 Luciferase-like monooxygenase At1D1609_34120 PF00296 Luciferase-like monooxygenase At1D1609_34130 PF02082 Transcriptional regulator At1D1609_34150 PF01613 Flavin reductase like domain At1D1609_34160 PF00296 Luciferase-like monooxygenase At1D1609_34190 PF00296 Luciferase-like monooxygenase At1D1609_34200 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_34200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_34200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_34220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_34230 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_34240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_34250 PF00005 ABC transporter At1D1609_34250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_34260 PF00005 ABC transporter At1D1609_34260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_34270 PF00248 Aldo/keto reductase family At1D1609_34280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_34280 PF08028 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_34290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_34290 PF03466 LysR substrate binding domain At1D1609_34310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_34330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_34340 PF07687 Peptidase dimerisation domain At1D1609_34340 PF01546 Peptidase family M20/M25/M40 At1D1609_34350 PF00296 Luciferase-like monooxygenase At1D1609_34360 PF05368 NmrA-like family At1D1609_34390 PF00296 Luciferase-like monooxygenase At1D1609_34400 PF13378 Enolase C-terminal domain-like At1D1609_34400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_34420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_34430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_34430 PF00005 ABC transporter At1D1609_34440 PF00005 ABC transporter At1D1609_34440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_34450 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_34450 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_34460 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_34470 PF07729 FCD domain At1D1609_34470 PF00392 Bacterial regulatory proteins, gntR family At1D1609_34490 PF00561 alpha/beta hydrolase fold At1D1609_34500 PF00106 short chain dehydrogenase At1D1609_34520 PF04273 Putative phosphatase (DUF442) At1D1609_34520 PF00753 Metallo-beta-lactamase superfamily At1D1609_34540 PF04143 Sulphur transport At1D1609_34560 PF06415 BPG-independent PGAM N-terminus (iPGM_N) At1D1609_34560 PF01676 Metalloenzyme superfamily At1D1609_34570 PF02817 e3 binding domain At1D1609_34570 PF00364 Biotin-requiring enzyme At1D1609_34570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) At1D1609_34580 PF02780 Transketolase, C-terminal domain At1D1609_34580 PF02779 Transketolase, pyrimidine binding domain At1D1609_34590 PF00676 Dehydrogenase E1 component At1D1609_34590 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal At1D1609_34600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_34600 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_34600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_34610 PF02803 Thiolase, C-terminal domain At1D1609_34610 PF00108 Thiolase, N-terminal domain At1D1609_34620 PF01037 Lrp/AsnC ligand binding domain At1D1609_34630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_34630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_34630 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_34640 PF01039 Carboxyl transferase domain At1D1609_34650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_34650 PF02785 Biotin carboxylase C-terminal domain At1D1609_34650 PF00289 Biotin carboxylase, N-terminal domain At1D1609_34650 PF00364 Biotin-requiring enzyme At1D1609_34660 PF00682 HMGL-like At1D1609_34670 PF00378 Enoyl-CoA hydratase/isomerase At1D1609_34680 PF02569 Pantoate-beta-alanine ligase At1D1609_34690 PF02548 Ketopantoate hydroxymethyltransferase At1D1609_34700 PF01261 Xylose isomerase-like TIM barrel At1D1609_34710 PF00596 Class II Aldolase and Adducin N-terminal domain At1D1609_34720 PF00455 DeoR C terminal sensor domain At1D1609_34720 PF08220 DeoR-like helix-turn-helix domain At1D1609_34730 PF13407 Periplasmic binding protein domain At1D1609_34740 PF00005 ABC transporter At1D1609_34750 PF02653 Branched-chain amino acid transport system / permease component At1D1609_34760 PF02653 Branched-chain amino acid transport system / permease component At1D1609_34770 PF05336 L-rhamnose mutarotase At1D1609_34790 PF00561 alpha/beta hydrolase fold At1D1609_34810 PF08448 PAS fold At1D1609_34810 PF08447 PAS fold At1D1609_34810 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_34810 PF00563 EAL domain At1D1609_34830 PF00171 Aldehyde dehydrogenase family At1D1609_34840 PF08713 DNA alkylation repair enzyme At1D1609_34850 PF00005 ABC transporter At1D1609_34860 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_34870 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_34890 PF00378 Enoyl-CoA hydratase/isomerase At1D1609_34920 PF08241 Methyltransferase domain At1D1609_34940 PF00795 Carbon-nitrogen hydrolase At1D1609_34950 PF00462 Glutaredoxin At1D1609_34970 PF08241 Methyltransferase domain At1D1609_35000 PF00293 NUDIX domain At1D1609_35010 PF00583 Acetyltransferase (GNAT) family At1D1609_35010 PF13508 Acetyltransferase (GNAT) domain At1D1609_35020 PF01960 ArgJ family At1D1609_35040 PF02810 SEC-C motif At1D1609_35040 PF01043 SecA preprotein cross-linking domain At1D1609_35040 PF07516 SecA Wing and Scaffold domain At1D1609_35040 PF07517 SecA DEAD-like domain At1D1609_35050 PF00892 EamA-like transporter family At1D1609_35060 PF01757 Acyltransferase family At1D1609_35160 PF01943 Polysaccharide biosynthesis protein At1D1609_35170 PF13439 Glycosyltransferase Family 4 At1D1609_35170 PF00534 Glycosyl transferases group 1 At1D1609_35200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1609_35200 PF13807 G-rich domain on putative tyrosine kinase At1D1609_35200 PF02706 Chain length determinant protein At1D1609_35240 PF13439 Glycosyltransferase Family 4 At1D1609_35240 PF00534 Glycosyl transferases group 1 At1D1609_35250 PF13439 Glycosyltransferase Family 4 At1D1609_35250 PF00534 Glycosyl transferases group 1 At1D1609_35280 PF01272 Transcription elongation factor, GreA/GreB, C-term At1D1609_35280 PF03449 Transcription elongation factor, N-terminal At1D1609_35290 PF00722 Glycosyl hydrolases family 16 At1D1609_35290 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) At1D1609_35350 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding At1D1609_35380 PF01381 Helix-turn-helix At1D1609_35400 PF08267 Cobalamin-independent synthase, N-terminal domain At1D1609_35400 PF01717 Cobalamin-independent synthase, Catalytic domain At1D1609_35410 PF00005 ABC transporter At1D1609_35420 PF02653 Branched-chain amino acid transport system / permease component At1D1609_35430 PF13407 Periplasmic binding protein domain At1D1609_35450 PF01266 FAD dependent oxidoreductase At1D1609_35450 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1609_35480 PF00364 Biotin-requiring enzyme At1D1609_35480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_35480 PF00289 Biotin carboxylase, N-terminal domain At1D1609_35480 PF02785 Biotin carboxylase C-terminal domain At1D1609_35510 PF02798 Glutathione S-transferase, N-terminal domain At1D1609_35520 PF01039 Carboxyl transferase domain At1D1609_35530 PF01381 Helix-turn-helix At1D1609_35530 PF09856 Predicted transcriptional regulator (DUF2083) At1D1609_35530 PF06114 IrrE N-terminal-like domain At1D1609_35540 PF00730 HhH-GPD superfamily base excision DNA repair protein At1D1609_35540 PF02805 Metal binding domain of Ada At1D1609_35540 PF06029 AlkA N-terminal domain At1D1609_35540 PF12833 Helix-turn-helix domain At1D1609_35550 PF00749 tRNA synthetases class I (E and Q), catalytic domain At1D1609_35570 PF00106 short chain dehydrogenase At1D1609_35590 PF01923 Cobalamin adenosyltransferase At1D1609_35610 PF01012 Electron transfer flavoprotein domain At1D1609_35620 PF01012 Electron transfer flavoprotein domain At1D1609_35620 PF00766 Electron transfer flavoprotein FAD-binding domain At1D1609_35630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At1D1609_35630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At1D1609_35640 PF08534 Redoxin At1D1609_35650 PF14698 Argininosuccinate lyase C-terminal At1D1609_35650 PF00206 Lyase At1D1609_35670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain At1D1609_35670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1609_35690 PF00072 Response regulator receiver domain At1D1609_35700 PF00156 Phosphoribosyl transferase domain At1D1609_35720 PF00005 ABC transporter At1D1609_35760 PF04752 ChaC-like protein At1D1609_35780 PF02153 Prephenate dehydrogenase At1D1609_35790 PF00155 Aminotransferase class I and II At1D1609_35800 PF01209 ubiE/COQ5 methyltransferase family At1D1609_35810 PF00753 Metallo-beta-lactamase superfamily At1D1609_35810 PF16123 Hydroxyacylglutathione hydrolase C-terminus At1D1609_35840 PF00830 Ribosomal L28 family At1D1609_35850 PF02592 Putative vitamin uptake transporter At1D1609_35870 PF11775 Cobalamin biosynthesis protein CobT VWA domain At1D1609_35870 PF06213 Cobalamin biosynthesis protein CobT At1D1609_35880 PF07728 AAA domain (dynein-related subfamily) At1D1609_35880 PF08406 CbbQ/NirQ/NorQ C-terminal At1D1609_35880 PF12556 Cobaltochelatase CobS subunit N terminal At1D1609_35890 PF00226 DnaJ domain At1D1609_35900 PF01722 BolA-like protein At1D1609_35920 PF01761 3-dehydroquinate synthase At1D1609_35930 PF01202 Shikimate kinase At1D1609_35950 PF00589 Phage integrase family At1D1609_35950 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_35960 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit At1D1609_35970 PF03734 L,D-transpeptidase catalytic domain At1D1609_35980 PF01206 Sulfurtransferase TusA At1D1609_35980 PF00581 Rhodanese-like domain At1D1609_35990 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1609_35990 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1609_36000 PF07943 Penicillin-binding protein 5, C-terminal domain At1D1609_36000 PF00768 D-alanyl-D-alanine carboxypeptidase At1D1609_36010 PF07687 Peptidase dimerisation domain At1D1609_36010 PF01546 Peptidase family M20/M25/M40 At1D1609_36110 PF13086 AAA domain At1D1609_36110 PF13195 Protein of unknown function (DUF4011) At1D1609_36110 PF13087 AAA domain At1D1609_36110 PF13195 Protein of unknown function (DUF4011) At1D1609_36110 PF13086 AAA domain At1D1609_36110 PF13087 AAA domain At1D1609_36140 PF06480 FtsH Extracellular At1D1609_36140 PF01434 Peptidase family M41 At1D1609_36140 PF17862 AAA+ lid domain At1D1609_36140 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_36180 PF01758 Sodium Bile acid symporter family At1D1609_36190 PF03960 ArsC family At1D1609_36200 PF03358 NADPH-dependent FMN reductase At1D1609_36250 PF03466 LysR substrate binding domain At1D1609_36250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_36280 PF02417 Chromate transporter At1D1609_36290 PF09828 Chromate resistance exported protein At1D1609_36300 PF00700 Bacterial flagellin C-terminal helical region At1D1609_36300 PF00669 Bacterial flagellin N-terminal helical region At1D1609_36310 PF01165 Ribosomal protein S21 At1D1609_36350 PF04717 Type VI secretion system, phage-baseplate injector At1D1609_36380 PF00398 Ribosomal RNA adenine dimethylase At1D1609_36430 PF02796 Helix-turn-helix domain of resolvase At1D1609_36430 PF00239 Resolvase, N terminal domain At1D1609_36530 PF00009 Elongation factor Tu GTP binding domain At1D1609_36530 PF03764 Elongation factor G, domain IV At1D1609_36530 PF00679 Elongation factor G C-terminus At1D1609_36670 PF13286 Phosphohydrolase-associated domain At1D1609_36670 PF01966 HD domain At1D1609_36690 PF00294 pfkB family carbohydrate kinase At1D1609_36700 PF06508 Queuosine biosynthesis protein QueC At1D1609_36730 PF01527 Transposase At1D1609_36740 PF00665 Integrase core domain At1D1609_36750 PF02867 Ribonucleotide reductase, barrel domain At1D1609_36750 PF08471 Class II vitamin B12-dependent ribonucleotide reductase At1D1609_36850 PF00912 Transglycosylase At1D1609_36850 PF06832 Penicillin-Binding Protein C-terminus Family At1D1609_36850 PF00905 Penicillin binding protein transpeptidase domain At1D1609_36860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain At1D1609_36860 PF11974 Bacterial alpha-2-macroglobulin MG3 domain At1D1609_36860 PF00207 Alpha-2-macroglobulin family At1D1609_36860 PF07703 Alpha-2-macroglobulin bait region domain At1D1609_36860 PF07678 A-macroglobulin TED domain At1D1609_36860 PF01835 MG2 domain At1D1609_36860 PF17962 Bacterial macroglobulin domain 6 At1D1609_36860 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain At1D1609_36860 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain At1D1609_36870 PF03966 Trm112p-like protein At1D1609_36890 PF00085 Thioredoxin At1D1609_36950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_36950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_36950 PF01842 ACT domain At1D1609_36970 PF13505 Outer membrane protein beta-barrel domain At1D1609_36980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At1D1609_36980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At1D1609_36980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At1D1609_36980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At1D1609_36990 PF01434 Peptidase family M41 At1D1609_36990 PF06480 FtsH Extracellular At1D1609_36990 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_36990 PF17862 AAA+ lid domain At1D1609_37000 PF01171 PP-loop family At1D1609_37020 PF00691 OmpA family At1D1609_37030 PF07676 WD40-like Beta Propeller Repeat At1D1609_37030 PF04052 TolB amino-terminal domain At1D1609_37050 PF02472 Biopolymer transport protein ExbD/TolR At1D1609_37060 PF01618 MotA/TolQ/ExbB proton channel family At1D1609_37070 PF03061 Thioesterase superfamily At1D1609_37080 PF00293 NUDIX domain At1D1609_37090 PF00293 NUDIX domain At1D1609_37120 PF17864 RuvB AAA lid domain At1D1609_37120 PF05491 RuvB C-terminal winged helix domain At1D1609_37120 PF05496 Holliday junction DNA helicase RuvB P-loop domain At1D1609_37150 PF07499 RuvA, C-terminal domain At1D1609_37150 PF01330 RuvA N terminal domain At1D1609_37160 PF02075 Crossover junction endodeoxyribonuclease RuvC At1D1609_37170 PF00672 HAMP domain At1D1609_37170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_37180 PF00296 Luciferase-like monooxygenase At1D1609_37190 PF01709 Transcriptional regulator At1D1609_37220 PF13277 YmdB-like protein At1D1609_37240 PF00571 CBS domain At1D1609_37240 PF03471 Transporter associated domain At1D1609_37240 PF01595 Cyclin M transmembrane N-terminal domain At1D1609_37270 PF02779 Transketolase, pyrimidine binding domain At1D1609_37270 PF02780 Transketolase, C-terminal domain At1D1609_37270 PF00456 Transketolase, thiamine diphosphate binding domain At1D1609_37280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain At1D1609_37280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain At1D1609_37290 PF03471 Transporter associated domain At1D1609_37290 PF00999 Sodium/hydrogen exchanger family At1D1609_37300 PF00162 Phosphoglycerate kinase At1D1609_37310 PF00274 Fructose-bisphosphate aldolase class-I At1D1609_37320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_37330 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_37330 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_37350 PF09339 IclR helix-turn-helix domain At1D1609_37350 PF01614 Bacterial transcriptional regulator At1D1609_37370 PF13193 AMP-binding enzyme C-terminal domain At1D1609_37370 PF00501 AMP-binding enzyme At1D1609_37430 PF01037 Lrp/AsnC ligand binding domain At1D1609_37480 PF01197 Ribosomal protein L31 At1D1609_37490 PF00664 ABC transporter transmembrane region At1D1609_37490 PF00005 ABC transporter At1D1609_37500 PF00890 FAD binding domain At1D1609_37510 PF01389 OmpA-like transmembrane domain At1D1609_37510 PF00691 OmpA family At1D1609_37530 PF00459 Inositol monophosphatase family At1D1609_37590 PF00731 AIR carboxylase At1D1609_37600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain At1D1609_37600 PF02222 ATP-grasp domain At1D1609_37610 PF00444 Ribosomal protein L36 At1D1609_37640 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) At1D1609_37680 PF02887 Pyruvate kinase, alpha/beta domain At1D1609_37680 PF00224 Pyruvate kinase, barrel domain At1D1609_37690 PF05951 Bacterial protein of unknown function (DUF882) At1D1609_37700 PF00158 Sigma-54 interaction domain At1D1609_37700 PF00072 Response regulator receiver domain At1D1609_37700 PF02954 Bacterial regulatory protein, Fis family At1D1609_37710 PF01432 Peptidase family M3 At1D1609_37710 PF08439 Oligopeptidase F At1D1609_37720 PF01063 Amino-transferase class IV At1D1609_37730 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_37730 PF17151 Periplasmic sensor domain At1D1609_37740 PF16653 Saccharopine dehydrogenase C-terminal domain At1D1609_37740 PF03435 Saccharopine dehydrogenase NADP binding domain At1D1609_37760 PF00149 Calcineurin-like phosphoesterase At1D1609_37760 PF02872 5'-nucleotidase, C-terminal domain At1D1609_37770 PF00762 Ferrochelatase At1D1609_37780 PF16200 C-terminal region of band_7 At1D1609_37780 PF01145 SPFH domain / Band 7 family At1D1609_37800 PF00571 CBS domain At1D1609_37800 PF01380 SIS domain At1D1609_37830 PF00483 Nucleotidyl transferase At1D1609_37840 PF13406 Transglycosylase SLT domain At1D1609_37860 PF00072 Response regulator receiver domain At1D1609_37860 PF00486 Transcriptional regulatory protein, C terminal At1D1609_37870 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_37870 PF00672 HAMP domain At1D1609_37870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_37880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster At1D1609_37880 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_37890 PF00310 Glutamine amidotransferases class-II At1D1609_37890 PF01645 Conserved region in glutamate synthase At1D1609_37890 PF01493 GXGXG motif At1D1609_37890 PF04898 Glutamate synthase central domain At1D1609_37900 PF01212 Beta-eliminating lyase At1D1609_37910 PF00486 Transcriptional regulatory protein, C terminal At1D1609_37910 PF00072 Response regulator receiver domain At1D1609_37920 PF13492 GAF domain At1D1609_37920 PF13493 Domain of unknown function (DUF4118) At1D1609_37920 PF02702 Osmosensitive K+ channel His kinase sensor domain At1D1609_37920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_37920 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_37930 PF02669 K+-transporting ATPase, c chain At1D1609_37960 PF03814 Potassium-transporting ATPase A subunit At1D1609_37980 PF17763 Glutaminase/Asparaginase C-terminal domain At1D1609_37980 PF00710 Asparaginase, N-terminal At1D1609_37990 PF00324 Amino acid permease At1D1609_38000 PF10415 Fumarase C C-terminus At1D1609_38000 PF00206 Lyase At1D1609_38010 PF07729 FCD domain At1D1609_38010 PF00392 Bacterial regulatory proteins, gntR family At1D1609_38020 PF00873 AcrB/AcrD/AcrF family At1D1609_38040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_38040 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_38060 PF00171 Aldehyde dehydrogenase family At1D1609_38070 PF00005 ABC transporter At1D1609_38070 PF08402 TOBE domain At1D1609_38080 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38090 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38120 PF00171 Aldehyde dehydrogenase family At1D1609_38130 PF00296 Luciferase-like monooxygenase At1D1609_38140 PF01613 Flavin reductase like domain At1D1609_38150 PF12697 Alpha/beta hydrolase family At1D1609_38170 PF00392 Bacterial regulatory proteins, gntR family At1D1609_38170 PF07702 UTRA domain At1D1609_38200 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38210 PF00571 CBS domain At1D1609_38210 PF00005 ABC transporter At1D1609_38220 PF00221 Aromatic amino acid lyase At1D1609_38230 PF00392 Bacterial regulatory proteins, gntR family At1D1609_38230 PF07729 FCD domain At1D1609_38240 PF00551 Formyl transferase At1D1609_38250 PF00120 Glutamine synthetase, catalytic domain At1D1609_38260 PF01645 Conserved region in glutamate synthase At1D1609_38270 PF01493 GXGXG motif At1D1609_38300 PF12833 Helix-turn-helix domain At1D1609_38300 PF01965 DJ-1/PfpI family At1D1609_38310 PF01266 FAD dependent oxidoreductase At1D1609_38320 PF04267 Sarcosine oxidase, delta subunit family At1D1609_38330 PF01571 Aminomethyltransferase folate-binding domain At1D1609_38330 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1609_38330 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_38330 PF17806 Sarcosine oxidase A3 domain At1D1609_38350 PF07729 FCD domain At1D1609_38350 PF00392 Bacterial regulatory proteins, gntR family At1D1609_38370 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38390 PF08402 TOBE domain At1D1609_38390 PF00005 ABC transporter At1D1609_38410 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38440 PF01613 Flavin reductase like domain At1D1609_38460 PF00701 Dihydrodipicolinate synthetase family At1D1609_38470 PF00005 ABC transporter At1D1609_38470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_38490 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_38520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA At1D1609_38530 PF00465 Iron-containing alcohol dehydrogenase At1D1609_38540 PF00392 Bacterial regulatory proteins, gntR family At1D1609_38540 PF07729 FCD domain At1D1609_38570 PF03061 Thioesterase superfamily At1D1609_38610 PF14403 Circularly permuted ATP-grasp type 2 At1D1609_38610 PF04168 A predicted alpha-helical domain with a conserved ER motif. At1D1609_38620 PF01841 Transglutaminase-like superfamily At1D1609_38620 PF08379 Bacterial transglutaminase-like N-terminal region At1D1609_38640 PF12848 ABC transporter At1D1609_38640 PF00005 ABC transporter At1D1609_38650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_38650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_38660 PF07729 FCD domain At1D1609_38660 PF00392 Bacterial regulatory proteins, gntR family At1D1609_38690 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38700 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38710 PF07470 Glycosyl Hydrolase Family 88 At1D1609_38720 PF00005 ABC transporter At1D1609_38720 PF03459 TOBE domain At1D1609_38720 PF17912 MalK OB fold domain At1D1609_38740 PF01547 Bacterial extracellular solute-binding protein At1D1609_38760 PF14602 Hexapeptide repeat of succinyl-transferase At1D1609_38760 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_38760 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal At1D1609_38770 PF01070 FMN-dependent dehydrogenase At1D1609_38800 PF00107 Zinc-binding dehydrogenase At1D1609_38800 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_38810 PF03737 Aldolase/RraA At1D1609_38820 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_38830 PF00005 ABC transporter At1D1609_38840 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38850 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_38860 PF00106 short chain dehydrogenase At1D1609_38870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_38870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_38890 PF01370 NAD dependent epimerase/dehydratase family At1D1609_38900 PF01970 Tripartite tricarboxylate transporter TctA family At1D1609_38920 PF03737 Aldolase/RraA At1D1609_38930 PF03401 Tripartite tricarboxylate transporter family receptor At1D1609_38940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_38940 PF03466 LysR substrate binding domain At1D1609_38950 PF00892 EamA-like transporter family At1D1609_38960 PF00892 EamA-like transporter family At1D1609_38970 PF00364 Biotin-requiring enzyme At1D1609_38980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_38980 PF00289 Biotin carboxylase, N-terminal domain At1D1609_38980 PF02785 Biotin carboxylase C-terminal domain At1D1609_39000 PF02682 Carboxyltransferase domain, subdomain C and D At1D1609_39010 PF02626 Carboxyltransferase domain, subdomain A and B At1D1609_39020 PF03746 LamB/YcsF family At1D1609_39030 PF08402 TOBE domain At1D1609_39030 PF00005 ABC transporter At1D1609_39050 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_39060 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_39080 PF00106 short chain dehydrogenase At1D1609_39090 PF03466 LysR substrate binding domain At1D1609_39090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_39120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_39120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_39130 PF01791 DeoC/LacD family aldolase At1D1609_39140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1609_39140 PF01266 FAD dependent oxidoreductase At1D1609_39150 PF00248 Aldo/keto reductase family At1D1609_39170 PF02653 Branched-chain amino acid transport system / permease component At1D1609_39180 PF00005 ABC transporter At1D1609_39210 PF00550 Phosphopantetheine attachment site At1D1609_39230 PF00005 ABC transporter At1D1609_39230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_39240 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_39240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_39250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_39260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_39270 PF00589 Phage integrase family At1D1609_39270 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_39400 PF06689 ClpX C4-type zinc finger At1D1609_39400 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_39400 PF07724 AAA domain (Cdc48 subfamily) At1D1609_39430 PF00075 RNase H At1D1609_39880 PF00072 Response regulator receiver domain At1D1609_39900 PF00459 Inositol monophosphatase family At1D1609_39920 PF00011 Hsp20/alpha crystallin family At1D1609_39930 PF13593 SBF-like CPA transporter family (DUF4137) At1D1609_39940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_39940 PF03466 LysR substrate binding domain At1D1609_39950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_39950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_39980 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_39990 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_40000 PF00005 ABC transporter At1D1609_40000 PF17912 MalK OB fold domain At1D1609_40010 PF00005 ABC transporter At1D1609_40010 PF17912 MalK OB fold domain At1D1609_40020 PF01266 FAD dependent oxidoreductase At1D1609_40020 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1609_40030 PF08220 DeoR-like helix-turn-helix domain At1D1609_40030 PF00455 DeoR C terminal sensor domain At1D1609_40040 PF14824 Sirohaem biosynthesis protein central At1D1609_40040 PF10414 Sirohaem synthase dimerisation region At1D1609_40040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases At1D1609_40050 PF01568 Molydopterin dinucleotide binding domain At1D1609_40050 PF00384 Molybdopterin oxidoreductase At1D1609_40050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1609_40050 PF04324 BFD-like [2Fe-2S] binding domain At1D1609_40080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain At1D1609_40080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain At1D1609_40080 PF04324 BFD-like [2Fe-2S] binding domain At1D1609_40080 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_40080 PF18267 Rubredoxin NAD+ reductase C-terminal domain At1D1609_40090 PF00005 ABC transporter At1D1609_40100 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_40130 PF03861 ANTAR domain At1D1609_40130 PF08376 Nitrate and nitrite sensing At1D1609_40140 PF07729 FCD domain At1D1609_40140 PF00392 Bacterial regulatory proteins, gntR family At1D1609_40150 PF01566 Natural resistance-associated macrophage protein At1D1609_40160 PF03746 LamB/YcsF family At1D1609_40170 PF07286 Protein of unknown function (DUF1445) At1D1609_40180 PF02682 Carboxyltransferase domain, subdomain C and D At1D1609_40190 PF00289 Biotin carboxylase, N-terminal domain At1D1609_40190 PF00364 Biotin-requiring enzyme At1D1609_40190 PF02785 Biotin carboxylase C-terminal domain At1D1609_40190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain At1D1609_40200 PF02806 Alpha amylase, C-terminal all-beta domain At1D1609_40200 PF00128 Alpha amylase, catalytic domain At1D1609_40210 PF09278 MerR, DNA binding At1D1609_40210 PF00376 MerR family regulatory protein At1D1609_40220 PF07715 TonB-dependent Receptor Plug Domain At1D1609_40220 PF00593 TonB dependent receptor At1D1609_40230 PF03466 LysR substrate binding domain At1D1609_40230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_40240 PF06772 Bacterial low temperature requirement A protein (LtrA) At1D1609_40270 PF11800 Replication protein C C-terminal region At1D1609_40270 PF03428 Replication protein C N-terminal domain At1D1609_40280 PF02195 ParB-like nuclease domain At1D1609_40280 PF07506 RepB plasmid partitioning protein At1D1609_40290 PF13614 AAA domain At1D1609_40310 PF01042 Endoribonuclease L-PSP At1D1609_40320 PF01168 Alanine racemase, N-terminal domain At1D1609_40320 PF14031 Putative serine dehydratase domain At1D1609_40330 PF07171 MlrC C-terminus At1D1609_40330 PF07364 Metallopeptidase family M81 At1D1609_40340 PF05962 HutD At1D1609_40350 PF01175 Urocanase Rossmann-like domain At1D1609_40350 PF17392 Urocanase C-terminal domain At1D1609_40350 PF17391 Urocanase N-terminal domain At1D1609_40370 PF00221 Aromatic amino acid lyase At1D1609_40380 PF01979 Amidohydrolase family At1D1609_40390 PF01979 Amidohydrolase family At1D1609_40420 PF13333 Integrase core domain At1D1609_40420 PF13276 HTH-like domain At1D1609_40420 PF00665 Integrase core domain At1D1609_40450 PF00005 ABC transporter At1D1609_40460 PF01032 FecCD transport family At1D1609_40470 PF01032 FecCD transport family At1D1609_40480 PF01497 Periplasmic binding protein At1D1609_40490 PF07715 TonB-dependent Receptor Plug Domain At1D1609_40520 PF00501 AMP-binding enzyme At1D1609_40520 PF13193 AMP-binding enzyme C-terminal domain At1D1609_40520 PF00668 Condensation domain At1D1609_40520 PF00550 Phosphopantetheine attachment site At1D1609_40520 PF00501 AMP-binding enzyme At1D1609_40520 PF13193 AMP-binding enzyme C-terminal domain At1D1609_40520 PF00668 Condensation domain At1D1609_40520 PF00550 Phosphopantetheine attachment site At1D1609_40530 PF00501 AMP-binding enzyme At1D1609_40530 PF13193 AMP-binding enzyme C-terminal domain At1D1609_40530 PF00668 Condensation domain At1D1609_40530 PF00550 Phosphopantetheine attachment site At1D1609_40540 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_40540 PF16197 Ketoacyl-synthetase C-terminal extension At1D1609_40540 PF00550 Phosphopantetheine attachment site At1D1609_40540 PF00698 Acyl transferase domain At1D1609_40540 PF00668 Condensation domain At1D1609_40540 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_40580 PF13193 AMP-binding enzyme C-terminal domain At1D1609_40580 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_40580 PF00668 Condensation domain At1D1609_40580 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_40580 PF00501 AMP-binding enzyme At1D1609_40580 PF00550 Phosphopantetheine attachment site At1D1609_40580 PF00202 Aminotransferase class-III At1D1609_40580 PF16197 Ketoacyl-synthetase C-terminal extension At1D1609_40590 PF13649 Methyltransferase domain At1D1609_40600 PF13193 AMP-binding enzyme C-terminal domain At1D1609_40600 PF00501 AMP-binding enzyme At1D1609_40600 PF00668 Condensation domain At1D1609_40600 PF07993 Male sterility protein At1D1609_40600 PF00550 Phosphopantetheine attachment site At1D1609_40610 PF00501 AMP-binding enzyme At1D1609_40620 PF02801 Beta-ketoacyl synthase, C-terminal domain At1D1609_40620 PF00550 Phosphopantetheine attachment site At1D1609_40620 PF16197 Ketoacyl-synthetase C-terminal extension At1D1609_40620 PF00668 Condensation domain At1D1609_40620 PF00109 Beta-ketoacyl synthase, N-terminal domain At1D1609_40620 PF00698 Acyl transferase domain At1D1609_40630 PF00296 Luciferase-like monooxygenase At1D1609_40640 PF00501 AMP-binding enzyme At1D1609_40640 PF00550 Phosphopantetheine attachment site At1D1609_40640 PF00668 Condensation domain At1D1609_40640 PF13193 AMP-binding enzyme C-terminal domain At1D1609_40660 PF01648 4'-phosphopantetheinyl transferase superfamily At1D1609_40670 PF02082 Transcriptional regulator At1D1609_40730 PF04444 Catechol dioxygenase N terminus At1D1609_40730 PF00775 Dioxygenase At1D1609_40740 PF01557 Fumarylacetoacetate (FAA) hydrolase family At1D1609_40750 PF03328 HpcH/HpaI aldolase/citrate lyase family At1D1609_40770 PF00440 Bacterial regulatory proteins, tetR family At1D1609_40840 PF01047 MarR family At1D1609_40850 PF03466 LysR substrate binding domain At1D1609_40850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_40860 PF04303 PrpF protein At1D1609_40880 PF00005 ABC transporter At1D1609_40890 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_40900 PF00672 HAMP domain At1D1609_40900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_40910 PF03358 NADPH-dependent FMN reductase At1D1609_40920 PF00296 Luciferase-like monooxygenase At1D1609_40950 PF03275 UDP-galactopyranose mutase At1D1609_40980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_40980 PF03466 LysR substrate binding domain At1D1609_40990 PF07690 Major Facilitator Superfamily At1D1609_41010 PF02129 X-Pro dipeptidyl-peptidase (S15 family) At1D1609_41020 PF03466 LysR substrate binding domain At1D1609_41020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_41030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_41060 PF07969 Amidohydrolase family At1D1609_41110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_41110 PF03466 LysR substrate binding domain At1D1609_41120 PF07690 Major Facilitator Superfamily At1D1609_41140 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_41140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_41140 PF00672 HAMP domain At1D1609_41150 PF00072 Response regulator receiver domain At1D1609_41150 PF00486 Transcriptional regulatory protein, C terminal At1D1609_41160 PF01569 PAP2 superfamily At1D1609_41250 PF13673 Acetyltransferase (GNAT) domain At1D1609_41260 PF06968 Biotin and Thiamin Synthesis associated domain At1D1609_41260 PF04055 Radical SAM superfamily At1D1609_41270 PF00155 Aminotransferase class I and II At1D1609_41290 PF00202 Aminotransferase class-III At1D1609_41300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III At1D1609_41300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal At1D1609_41320 PF00491 Arginase family At1D1609_41330 PF02423 Ornithine cyclodeaminase/mu-crystallin family At1D1609_41340 PF00892 EamA-like transporter family At1D1609_41350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_41350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_41360 PF00211 Adenylate and Guanylate cyclase catalytic domain At1D1609_41360 PF00672 HAMP domain At1D1609_41380 PF11972 HTH DNA binding domain At1D1609_41380 PF07756 Protein of unknown function (DUF1612) At1D1609_41390 PF00083 Sugar (and other) transporter At1D1609_41400 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_41400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_41410 PF00486 Transcriptional regulatory protein, C terminal At1D1609_41410 PF00072 Response regulator receiver domain At1D1609_41420 PF00884 Sulfatase At1D1609_41420 PF08019 Phosphoethanolamine transferase EptA/EptB At1D1609_41440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_41440 PF03466 LysR substrate binding domain At1D1609_41450 PF07715 TonB-dependent Receptor Plug Domain At1D1609_41450 PF00593 TonB dependent receptor At1D1609_41470 PF01032 FecCD transport family At1D1609_41480 PF00005 ABC transporter At1D1609_41500 PF00034 Cytochrome c At1D1609_41510 PF02631 RecX family At1D1609_41520 PF08450 SMP-30/Gluconolactonase/LRE-like region At1D1609_41540 PF02653 Branched-chain amino acid transport system / permease component At1D1609_41550 PF00005 ABC transporter At1D1609_41560 PF13407 Periplasmic binding protein domain At1D1609_41570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_41570 PF07730 Histidine kinase At1D1609_41580 PF00072 Response regulator receiver domain At1D1609_41580 PF00196 Bacterial regulatory proteins, luxR family At1D1609_41600 PF07995 Glucose / Sorbosone dehydrogenase At1D1609_41620 PF04445 Putative SAM-dependent methyltransferase At1D1609_41630 PF00849 RNA pseudouridylate synthase At1D1609_41640 PF01205 Uncharacterized protein family UPF0029 At1D1609_41650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_41650 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_41660 PF00005 ABC transporter At1D1609_41660 PF00571 CBS domain At1D1609_41670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_41690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_41690 PF00072 Response regulator receiver domain At1D1609_41690 PF13426 PAS domain At1D1609_41700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_41710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain At1D1609_41710 PF02706 Chain length determinant protein At1D1609_41710 PF13807 G-rich domain on putative tyrosine kinase At1D1609_41720 PF00483 Nucleotidyl transferase At1D1609_41730 PF00535 Glycosyl transferase family 2 At1D1609_41740 PF00535 Glycosyl transferase family 2 At1D1609_41750 PF00535 Glycosyl transferase family 2 At1D1609_41770 PF00722 Glycosyl hydrolases family 16 At1D1609_41780 PF01757 Acyltransferase family At1D1609_41790 PF01943 Polysaccharide biosynthesis protein At1D1609_41800 PF00535 Glycosyl transferase family 2 At1D1609_41810 PF04230 Polysaccharide pyruvyl transferase At1D1609_41820 PF00535 Glycosyl transferase family 2 At1D1609_41830 PF11089 Exopolysaccharide production repressor At1D1609_41860 PF01165 Ribosomal protein S21 At1D1609_41870 PF01266 FAD dependent oxidoreductase At1D1609_41900 PF17806 Sarcosine oxidase A3 domain At1D1609_41900 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_41900 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1609_41900 PF01571 Aminomethyltransferase folate-binding domain At1D1609_41930 PF01575 MaoC like domain At1D1609_41940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1609_41940 PF00128 Alpha amylase, catalytic domain At1D1609_41940 PF18390 Glycogen debranching enzyme C-terminal domain At1D1609_41950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II At1D1609_41950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III At1D1609_41950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain At1D1609_41950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I At1D1609_41960 PF00534 Glycosyl transferases group 1 At1D1609_41960 PF08323 Starch synthase catalytic domain At1D1609_41970 PF00483 Nucleotidyl transferase At1D1609_41980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1609_41980 PF02806 Alpha amylase, C-terminal all-beta domain At1D1609_41980 PF00128 Alpha amylase, catalytic domain At1D1609_41990 PF00343 Carbohydrate phosphorylase At1D1609_42010 PF01177 Asp/Glu/Hydantoin racemase At1D1609_42020 PF01037 Lrp/AsnC ligand binding domain At1D1609_42040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1609_42040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1609_42060 PF00107 Zinc-binding dehydrogenase At1D1609_42060 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_42080 PF00664 ABC transporter transmembrane region At1D1609_42080 PF00005 ABC transporter At1D1609_42090 PF00005 ABC transporter At1D1609_42090 PF00664 ABC transporter transmembrane region At1D1609_42100 PF01654 Cytochrome bd terminal oxidase subunit I At1D1609_42110 PF02322 Cytochrome bd terminal oxidase subunit II At1D1609_42120 PF08173 Membrane bound YbgT-like protein At1D1609_42160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain At1D1609_42160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain At1D1609_42170 PF00890 FAD binding domain At1D1609_42170 PF02910 Fumarate reductase flavoprotein C-term At1D1609_42180 PF02445 Quinolinate synthetase A protein At1D1609_42230 PF02224 Cytidylate kinase At1D1609_42240 PF00575 S1 RNA binding domain At1D1609_42300 PF00106 short chain dehydrogenase At1D1609_42310 PF00557 Metallopeptidase family M24 At1D1609_42310 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_42320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_42330 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_42340 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_42340 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_42350 PF00005 ABC transporter At1D1609_42350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_42360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_42360 PF00005 ABC transporter At1D1609_42370 PF08125 Mannitol dehydrogenase C-terminal domain At1D1609_42370 PF01232 Mannitol dehydrogenase Rossmann domain At1D1609_42380 PF07729 FCD domain At1D1609_42380 PF00392 Bacterial regulatory proteins, gntR family At1D1609_42390 PF13378 Enolase C-terminal domain-like At1D1609_42390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_42400 PF00296 Luciferase-like monooxygenase At1D1609_42430 PF00005 ABC transporter At1D1609_42430 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1609_42440 PF00005 ABC transporter At1D1609_42450 PF02653 Branched-chain amino acid transport system / permease component At1D1609_42460 PF11862 Domain of unknown function (DUF3382) At1D1609_42460 PF02653 Branched-chain amino acid transport system / permease component At1D1609_42470 PF00732 GMC oxidoreductase At1D1609_42470 PF05199 GMC oxidoreductase At1D1609_42480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1609_42480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1609_42490 PF00501 AMP-binding enzyme At1D1609_42490 PF13193 AMP-binding enzyme C-terminal domain At1D1609_42520 PF01011 PQQ enzyme repeat At1D1609_42530 PF05974 Domain of unknown function (DUF892) At1D1609_42540 PF02308 MgtC family At1D1609_42550 PF01266 FAD dependent oxidoreductase At1D1609_42590 PF01965 DJ-1/PfpI family At1D1609_42630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain At1D1609_42630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain At1D1609_42640 PF16363 GDP-mannose 4,6 dehydratase At1D1609_42650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain At1D1609_42650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain At1D1609_42650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain At1D1609_42670 PF13409 Glutathione S-transferase, N-terminal domain At1D1609_42680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_42680 PF03466 LysR substrate binding domain At1D1609_42690 PF00171 Aldehyde dehydrogenase family At1D1609_42700 PF09084 NMT1/THI5 like At1D1609_42710 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_42720 PF00005 ABC transporter At1D1609_42730 PF00171 Aldehyde dehydrogenase family At1D1609_42730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain At1D1609_42730 PF14850 DNA-binding domain of Proline dehydrogenase At1D1609_42730 PF01619 Proline dehydrogenase At1D1609_42740 PF01037 Lrp/AsnC ligand binding domain At1D1609_42750 PF08281 Sigma-70, region 4 At1D1609_42750 PF04542 Sigma-70 region 2 At1D1609_42770 PF00072 Response regulator receiver domain At1D1609_42780 PF08447 PAS fold At1D1609_42780 PF07536 HWE histidine kinase At1D1609_42780 PF13426 PAS domain At1D1609_42790 PF07536 HWE histidine kinase At1D1609_42790 PF13426 PAS domain At1D1609_42810 PF16363 GDP-mannose 4,6 dehydratase At1D1609_42840 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain At1D1609_42850 PF16653 Saccharopine dehydrogenase C-terminal domain At1D1609_42850 PF03435 Saccharopine dehydrogenase NADP binding domain At1D1609_42860 PF00271 Helicase conserved C-terminal domain At1D1609_42860 PF00270 DEAD/DEAH box helicase At1D1609_42870 PF13840 ACT domain At1D1609_42870 PF01842 ACT domain At1D1609_42870 PF00696 Amino acid kinase family At1D1609_42880 PF02896 PEP-utilising enzyme, TIM barrel domain At1D1609_42880 PF00391 PEP-utilising enzyme, mobile domain At1D1609_42880 PF05524 PEP-utilising enzyme, N-terminal At1D1609_42880 PF01590 GAF domain At1D1609_42890 PF00472 RF-1 domain At1D1609_42890 PF03462 PCRF domain At1D1609_42900 PF17827 PrmC N-terminal domain At1D1609_42900 PF05175 Methyltransferase small domain At1D1609_42920 PF17871 AAA lid domain At1D1609_42920 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_42920 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_42920 PF07724 AAA domain (Cdc48 subfamily) At1D1609_42920 PF02861 Clp amino terminal domain, pathogenicity island component At1D1609_42930 PF01464 Transglycosylase SLT domain At1D1609_42930 PF01551 Peptidase family M23 At1D1609_42930 PF10145 Phage-related minor tail protein At1D1609_42950 PF01527 Transposase At1D1609_42960 PF13683 Integrase core domain At1D1609_42960 PF13276 HTH-like domain At1D1609_43000 PF13340 Putative transposase of IS4/5 family (DUF4096) At1D1609_43020 PF02796 Helix-turn-helix domain of resolvase At1D1609_43020 PF00239 Resolvase, N terminal domain At1D1609_43040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_43040 PF03466 LysR substrate binding domain At1D1609_43050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_43050 PF13378 Enolase C-terminal domain-like At1D1609_43060 PF00356 Bacterial regulatory proteins, lacI family At1D1609_43070 PF03401 Tripartite tricarboxylate transporter family receptor At1D1609_43080 PF07331 Tripartite tricarboxylate transporter TctB family At1D1609_43090 PF01970 Tripartite tricarboxylate transporter TctA family At1D1609_43200 PF04717 Type VI secretion system, phage-baseplate injector At1D1609_43250 PF13683 Integrase core domain At1D1609_43250 PF13276 HTH-like domain At1D1609_43260 PF01527 Transposase At1D1609_43270 PF00356 Bacterial regulatory proteins, lacI family At1D1609_43290 PF02653 Branched-chain amino acid transport system / permease component At1D1609_43300 PF00005 ABC transporter At1D1609_43320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_43320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_43330 PF12697 Alpha/beta hydrolase family At1D1609_43390 PF00465 Iron-containing alcohol dehydrogenase At1D1609_43400 PF00795 Carbon-nitrogen hydrolase At1D1609_43410 PF00005 ABC transporter At1D1609_43410 PF12857 TOBE-like domain At1D1609_43420 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1609_43420 PF00005 ABC transporter At1D1609_43440 PF02653 Branched-chain amino acid transport system / permease component At1D1609_43450 PF13458 Periplasmic binding protein At1D1609_43480 PF03466 LysR substrate binding domain At1D1609_43480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_43490 PF00005 ABC transporter At1D1609_43490 PF08402 TOBE domain At1D1609_43510 PF01266 FAD dependent oxidoreductase At1D1609_43530 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_43540 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_43550 PF05199 GMC oxidoreductase At1D1609_43550 PF00732 GMC oxidoreductase At1D1609_43560 PF00171 Aldehyde dehydrogenase family At1D1609_43640 PF00072 Response regulator receiver domain At1D1609_43640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_43640 PF13426 PAS domain At1D1609_43650 PF07536 HWE histidine kinase At1D1609_43650 PF08447 PAS fold At1D1609_43650 PF13426 PAS domain At1D1609_43660 PF00072 Response regulator receiver domain At1D1609_43670 PF00072 Response regulator receiver domain At1D1609_43670 PF13426 PAS domain At1D1609_43670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_43700 PF00011 Hsp20/alpha crystallin family At1D1609_43720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_43720 PF03466 LysR substrate binding domain At1D1609_43730 PF00248 Aldo/keto reductase family At1D1609_43740 PF00356 Bacterial regulatory proteins, lacI family At1D1609_43750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_43750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_43760 PF01261 Xylose isomerase-like TIM barrel At1D1609_43770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_43770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_43780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_43780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_43790 PF00106 short chain dehydrogenase At1D1609_43800 PF00107 Zinc-binding dehydrogenase At1D1609_43800 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_43800 PF13823 Alcohol dehydrogenase GroES-associated At1D1609_43820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) At1D1609_43820 PF11941 Domain of unknown function (DUF3459) At1D1609_43820 PF00128 Alpha amylase, catalytic domain At1D1609_43830 PF00534 Glycosyl transferases group 1 At1D1609_43830 PF08323 Starch synthase catalytic domain At1D1609_43910 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_43920 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_43940 PF00563 EAL domain At1D1609_43940 PF12792 CSS motif domain associated with EAL At1D1609_43970 PF02734 DAK2 domain At1D1609_43970 PF02733 Dak1 domain At1D1609_43980 PF01037 Lrp/AsnC ligand binding domain At1D1609_43990 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_44000 PF17200 Single Cache domain 2 At1D1609_44000 PF07730 Histidine kinase At1D1609_44010 PF00072 Response regulator receiver domain At1D1609_44010 PF00196 Bacterial regulatory proteins, luxR family At1D1609_44020 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_44030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_44080 PF03466 LysR substrate binding domain At1D1609_44080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_44090 PF00701 Dihydrodipicolinate synthetase family At1D1609_44100 PF00480 ROK family At1D1609_44110 PF01547 Bacterial extracellular solute-binding protein At1D1609_44120 PF08402 TOBE domain At1D1609_44120 PF00005 ABC transporter At1D1609_44130 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_44150 PF00072 Response regulator receiver domain At1D1609_44150 PF00196 Bacterial regulatory proteins, luxR family At1D1609_44170 PF00293 NUDIX domain At1D1609_44180 PF03466 LysR substrate binding domain At1D1609_44180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_44190 PF00795 Carbon-nitrogen hydrolase At1D1609_44220 PF08402 TOBE domain At1D1609_44220 PF00005 ABC transporter At1D1609_44230 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_44240 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_44250 PF04324 BFD-like [2Fe-2S] binding domain At1D1609_44250 PF01266 FAD dependent oxidoreductase At1D1609_44260 PF04324 BFD-like [2Fe-2S] binding domain At1D1609_44260 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_44270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_44270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_44290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain At1D1609_44300 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1609_44310 PF00510 Cytochrome c oxidase subunit III At1D1609_44320 PF00510 Cytochrome c oxidase subunit III At1D1609_44350 PF01266 FAD dependent oxidoreductase At1D1609_44370 PF01571 Aminomethyltransferase folate-binding domain At1D1609_44370 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1609_44370 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_44370 PF17806 Sarcosine oxidase A3 domain At1D1609_44390 PF00464 Serine hydroxymethyltransferase At1D1609_44400 PF00551 Formyl transferase At1D1609_44420 PF00440 Bacterial regulatory proteins, tetR family At1D1609_44440 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_44440 PF00107 Zinc-binding dehydrogenase At1D1609_44450 PF12833 Helix-turn-helix domain At1D1609_44460 PF13407 Periplasmic binding protein domain At1D1609_44470 PF00005 ABC transporter At1D1609_44480 PF02653 Branched-chain amino acid transport system / permease component At1D1609_44490 PF00106 short chain dehydrogenase At1D1609_44500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_44500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_44530 PF02563 Polysaccharide biosynthesis/export protein At1D1609_44570 PF00691 OmpA family At1D1609_44680 PF10431 C-terminal, D2-small domain, of ClpB protein At1D1609_44680 PF07724 AAA domain (Cdc48 subfamily) At1D1609_44680 PF17871 AAA lid domain At1D1609_44680 PF00004 ATPase family associated with various cellular activities (AAA) At1D1609_44720 PF04717 Type VI secretion system, phage-baseplate injector At1D1609_44760 PF00563 EAL domain At1D1609_44760 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_44760 PF03707 Bacterial signalling protein N terminal repeat At1D1609_44760 PF13188 PAS domain At1D1609_44770 PF00459 Inositol monophosphatase family At1D1609_44800 PF00356 Bacterial regulatory proteins, lacI family At1D1609_44820 PF03459 TOBE domain At1D1609_44820 PF17912 MalK OB fold domain At1D1609_44820 PF00005 ABC transporter At1D1609_44830 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_44840 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_44850 PF13416 Bacterial extracellular solute-binding protein At1D1609_44860 PF01261 Xylose isomerase-like TIM barrel At1D1609_44870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_44870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_44880 PF00356 Bacterial regulatory proteins, lacI family At1D1609_44910 PF13407 Periplasmic binding protein domain At1D1609_44920 PF00005 ABC transporter At1D1609_44930 PF02653 Branched-chain amino acid transport system / permease component At1D1609_44940 PF02653 Branched-chain amino acid transport system / permease component At1D1609_44950 PF00356 Bacterial regulatory proteins, lacI family At1D1609_44970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_44970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_45010 PF00034 Cytochrome c At1D1609_45040 PF07732 Multicopper oxidase At1D1609_45040 PF00394 Multicopper oxidase At1D1609_45080 PF00092 von Willebrand factor type A domain At1D1609_45090 PF07728 AAA domain (dynein-related subfamily) At1D1609_45090 PF08406 CbbQ/NirQ/NorQ C-terminal At1D1609_45100 PF00115 Cytochrome C and Quinol oxidase polypeptide I At1D1609_45110 PF00034 Cytochrome c At1D1609_45130 PF00510 Cytochrome c oxidase subunit III At1D1609_45160 PF02441 Flavoprotein At1D1609_45170 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase At1D1609_45180 PF04343 Protein of unknown function, DUF488 At1D1609_45250 PF00005 ABC transporter At1D1609_45270 PF06796 Periplasmic nitrate reductase protein NapE At1D1609_45300 PF01568 Molydopterin dinucleotide binding domain At1D1609_45300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1609_45300 PF00384 Molybdopterin oxidoreductase At1D1609_45310 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) At1D1609_45320 PF03264 NapC/NirT cytochrome c family, N-terminal region At1D1609_45360 PF04954 Siderophore-interacting protein At1D1609_45360 PF08021 Siderophore-interacting FAD-binding domain At1D1609_45380 PF01032 FecCD transport family At1D1609_45390 PF01032 FecCD transport family At1D1609_45400 PF00005 ABC transporter At1D1609_45430 PF07715 TonB-dependent Receptor Plug Domain At1D1609_45440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain At1D1609_45440 PF02770 Acyl-CoA dehydrogenase, middle domain At1D1609_45440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain At1D1609_45450 PF03466 LysR substrate binding domain At1D1609_45450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_45460 PF00356 Bacterial regulatory proteins, lacI family At1D1609_45480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45500 PF00005 ABC transporter At1D1609_45500 PF08402 TOBE domain At1D1609_45520 PF01979 Amidohydrolase family At1D1609_45520 PF13382 Adenine deaminase C-terminal domain At1D1609_45530 PF07687 Peptidase dimerisation domain At1D1609_45530 PF01546 Peptidase family M20/M25/M40 At1D1609_45550 PF01244 Membrane dipeptidase (Peptidase family M19) At1D1609_45560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_45570 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_45590 PF00005 ABC transporter At1D1609_45600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_45600 PF00005 ABC transporter At1D1609_45610 PF03466 LysR substrate binding domain At1D1609_45610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_45620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_45630 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45640 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_45640 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45650 PF01425 Amidase At1D1609_45660 PF01965 DJ-1/PfpI family At1D1609_45680 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_45680 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45690 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_45710 PF07687 Peptidase dimerisation domain At1D1609_45710 PF01546 Peptidase family M20/M25/M40 At1D1609_45720 PF00005 ABC transporter At1D1609_45720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_45730 PF04198 Putative sugar-binding domain At1D1609_45750 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45760 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_45770 PF00005 ABC transporter At1D1609_45770 PF08402 TOBE domain At1D1609_45790 PF01232 Mannitol dehydrogenase Rossmann domain At1D1609_45790 PF08125 Mannitol dehydrogenase C-terminal domain At1D1609_45800 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_45810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_45810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_45840 PF00730 HhH-GPD superfamily base excision DNA repair protein At1D1609_45840 PF00633 Helix-hairpin-helix motif At1D1609_45840 PF10576 Iron-sulfur binding domain of endonuclease III At1D1609_45860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain At1D1609_45860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain At1D1609_45880 PF13936 Helix-turn-helix domain At1D1609_45880 PF04198 Putative sugar-binding domain At1D1609_45890 PF00923 Transaldolase/Fructose-6-phosphate aldolase At1D1609_45900 PF09339 IclR helix-turn-helix domain At1D1609_45900 PF01614 Bacterial transcriptional regulator At1D1609_45930 PF00950 ABC 3 transport family At1D1609_45940 PF00950 ABC 3 transport family At1D1609_45950 PF00005 ABC transporter At1D1609_45960 PF01297 Zinc-uptake complex component A periplasmic At1D1609_45980 PF01734 Patatin-like phospholipase At1D1609_45990 PF00152 tRNA synthetases class II (D, K and N) At1D1609_45990 PF01336 OB-fold nucleic acid binding domain At1D1609_46000 PF00749 tRNA synthetases class I (E and Q), catalytic domain At1D1609_46010 PF02080 TrkA-C domain At1D1609_46010 PF03600 Citrate transporter At1D1609_46020 PF01541 GIY-YIG catalytic domain At1D1609_46030 PF03471 Transporter associated domain At1D1609_46030 PF03741 Integral membrane protein TerC family At1D1609_46040 PF00440 Bacterial regulatory proteins, tetR family At1D1609_46050 PF13533 Biotin-lipoyl like At1D1609_46060 PF07690 Major Facilitator Superfamily At1D1609_46070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At1D1609_46070 PF00356 Bacterial regulatory proteins, lacI family At1D1609_46080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_46080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_46090 PF01261 Xylose isomerase-like TIM barrel At1D1609_46120 PF00232 Glycosyl hydrolase family 1 At1D1609_46130 PF00881 Nitroreductase family At1D1609_46140 PF00005 ABC transporter At1D1609_46140 PF09383 NIL domain At1D1609_46150 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46160 PF03180 NLPA lipoprotein At1D1609_46170 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_46170 PF00563 EAL domain At1D1609_46170 PF03707 Bacterial signalling protein N terminal repeat At1D1609_46170 PF13188 PAS domain At1D1609_46220 PF01081 KDPG and KHG aldolase At1D1609_46260 PF03824 High-affinity nickel-transport protein At1D1609_46300 PF13505 Outer membrane protein beta-barrel domain At1D1609_46330 PF02492 CobW/HypB/UreG, nucleotide-binding domain At1D1609_46330 PF07683 Cobalamin synthesis protein cobW C-terminal domain At1D1609_46340 PF02633 Creatinine amidohydrolase At1D1609_46350 PF01047 MarR family At1D1609_46360 PF00356 Bacterial regulatory proteins, lacI family At1D1609_46370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_46370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_46380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_46380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_46390 PF04962 KduI/IolB family At1D1609_46400 PF01261 Xylose isomerase-like TIM barrel At1D1609_46410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1609_46410 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1609_46410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1609_46420 PF00294 pfkB family carbohydrate kinase At1D1609_46440 PF00005 ABC transporter At1D1609_46450 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1609_46450 PF00005 ABC transporter At1D1609_46460 PF02653 Branched-chain amino acid transport system / permease component At1D1609_46480 PF13458 Periplasmic binding protein At1D1609_46510 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_46510 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46520 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_46540 PF00005 ABC transporter At1D1609_46540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_46550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_46570 PF01220 Dehydroquinase class II At1D1609_46580 PF08501 Shikimate dehydrogenase substrate binding domain At1D1609_46580 PF18317 Shikimate 5'-dehydrogenase C-terminal domain At1D1609_46590 PF00005 ABC transporter At1D1609_46600 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_46610 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46620 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46630 PF10397 Adenylosuccinate lyase C-terminus At1D1609_46630 PF00206 Lyase At1D1609_46640 PF00775 Dioxygenase At1D1609_46650 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal At1D1609_46650 PF00775 Dioxygenase At1D1609_46660 PF02627 Carboxymuconolactone decarboxylase family At1D1609_46680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_46680 PF03466 LysR substrate binding domain At1D1609_46690 PF01527 Transposase At1D1609_46700 PF13683 Integrase core domain At1D1609_46700 PF13276 HTH-like domain At1D1609_46710 PF01494 FAD binding domain At1D1609_46730 PF01614 Bacterial transcriptional regulator At1D1609_46730 PF09339 IclR helix-turn-helix domain At1D1609_46740 PF01144 Coenzyme A transferase At1D1609_46750 PF01144 Coenzyme A transferase At1D1609_46760 PF02803 Thiolase, C-terminal domain At1D1609_46760 PF00108 Thiolase, N-terminal domain At1D1609_46770 PF00356 Bacterial regulatory proteins, lacI family At1D1609_46780 PF13407 Periplasmic binding protein domain At1D1609_46790 PF13407 Periplasmic binding protein domain At1D1609_46800 PF01261 Xylose isomerase-like TIM barrel At1D1609_46810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_46810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_46830 PF00356 Bacterial regulatory proteins, lacI family At1D1609_46840 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46850 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_46860 PF00005 ABC transporter At1D1609_46860 PF17912 MalK OB fold domain At1D1609_46880 PF07470 Glycosyl Hydrolase Family 88 At1D1609_46920 PF07690 Major Facilitator Superfamily At1D1609_46930 PF07715 TonB-dependent Receptor Plug Domain At1D1609_46930 PF00593 TonB dependent receptor At1D1609_46940 PF16220 Domain of unknown function (DUF4880) At1D1609_46940 PF04773 FecR protein At1D1609_46960 PF00480 ROK family At1D1609_46960 PF01325 Iron dependent repressor, N-terminal DNA binding domain At1D1609_46980 PF00005 ABC transporter At1D1609_46980 PF17912 MalK OB fold domain At1D1609_46990 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_47000 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_47010 PF03009 Glycerophosphoryl diester phosphodiesterase family At1D1609_47020 PF00459 Inositol monophosphatase family At1D1609_47030 PF00106 short chain dehydrogenase At1D1609_47040 PF12833 Helix-turn-helix domain At1D1609_47040 PF12852 Cupin At1D1609_47060 PF11953 Domain of unknown function (DUF3470) At1D1609_47060 PF00037 4Fe-4S binding domain At1D1609_47070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At1D1609_47070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At1D1609_47090 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB At1D1609_47090 PF17287 POTRA domain At1D1609_47090 PF08479 POTRA domain, ShlB-type At1D1609_47110 PF04829 Pre-toxin domain with VENN motif At1D1609_47110 PF13332 Hemagglutinin repeat At1D1609_47110 PF04829 Pre-toxin domain with VENN motif At1D1609_47110 PF15526 Novel toxin 21 At1D1609_47110 PF05860 haemagglutination activity domain At1D1609_47110 PF05594 Haemagluttinin repeat At1D1609_47110 PF13332 Hemagglutinin repeat At1D1609_47110 PF05860 haemagglutination activity domain At1D1609_47110 PF15526 Novel toxin 21 At1D1609_47110 PF05594 Haemagluttinin repeat At1D1609_47130 PF13333 Integrase core domain At1D1609_47130 PF00665 Integrase core domain At1D1609_47130 PF13276 HTH-like domain At1D1609_47140 PF01527 Transposase At1D1609_47150 PF03389 MobA/MobL family At1D1609_47150 PF17841 BID domain of Bartonella effector protein (Bep) At1D1609_47150 PF01443 Viral (Superfamily 1) RNA helicase At1D1609_47190 PF02534 Type IV secretory system Conjugative DNA transfer At1D1609_47200 PF01758 Sodium Bile acid symporter family At1D1609_47210 PF00248 Aldo/keto reductase family At1D1609_47220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_47220 PF03466 LysR substrate binding domain At1D1609_47250 PF00664 ABC transporter transmembrane region At1D1609_47250 PF00005 ABC transporter At1D1609_47260 PF01050 Mannose-6-phosphate isomerase At1D1609_47260 PF00483 Nucleotidyl transferase At1D1609_47270 PF00534 Glycosyl transferases group 1 At1D1609_47280 PF16363 GDP-mannose 4,6 dehydratase At1D1609_47290 PF16363 GDP-mannose 4,6 dehydratase At1D1609_47320 PF01527 Transposase At1D1609_47330 PF13683 Integrase core domain At1D1609_47330 PF13276 HTH-like domain At1D1609_47360 PF08484 C-methyltransferase C-terminal domain At1D1609_47360 PF08421 Putative zinc binding domain At1D1609_47370 PF13439 Glycosyltransferase Family 4 At1D1609_47370 PF00534 Glycosyl transferases group 1 At1D1609_47380 PF00483 Nucleotidyl transferase At1D1609_47380 PF01050 Mannose-6-phosphate isomerase At1D1609_47410 PF01032 FecCD transport family At1D1609_47420 PF01032 FecCD transport family At1D1609_47430 PF00005 ABC transporter At1D1609_47440 PF07715 TonB-dependent Receptor Plug Domain At1D1609_47450 PF13361 UvrD-like helicase C-terminal domain At1D1609_47450 PF00580 UvrD/REP helicase N-terminal domain At1D1609_47460 PF00005 ABC transporter At1D1609_47460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_47470 PF00005 ABC transporter At1D1609_47470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_47480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_47480 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_47490 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_47500 PF00392 Bacterial regulatory proteins, gntR family At1D1609_47500 PF07729 FCD domain At1D1609_47510 PF03786 D-mannonate dehydratase (UxuA) At1D1609_47520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_47540 PF03707 Bacterial signalling protein N terminal repeat At1D1609_47540 PF00563 EAL domain At1D1609_47540 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_47540 PF13188 PAS domain At1D1609_47570 PF02735 Ku70/Ku80 beta-barrel domain At1D1609_47580 PF13298 DNA polymerase Ligase (LigD) At1D1609_47580 PF01068 ATP dependent DNA ligase domain At1D1609_47580 PF04679 ATP dependent DNA ligase C terminal region At1D1609_47590 PF02735 Ku70/Ku80 beta-barrel domain At1D1609_47600 PF01384 Phosphate transporter family At1D1609_47610 PF01865 Protein of unknown function DUF47 At1D1609_47640 PF00873 AcrB/AcrD/AcrF family At1D1609_47650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_47650 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_47660 PF00072 Response regulator receiver domain At1D1609_47660 PF00486 Transcriptional regulatory protein, C terminal At1D1609_47670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_47670 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_47670 PF00672 HAMP domain At1D1609_47690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_47690 PF03466 LysR substrate binding domain At1D1609_47700 PF00141 Peroxidase At1D1609_47720 PF02311 AraC-like ligand binding domain At1D1609_47720 PF12833 Helix-turn-helix domain At1D1609_47730 PF07715 TonB-dependent Receptor Plug Domain At1D1609_47730 PF00593 TonB dependent receptor At1D1609_47750 PF01032 FecCD transport family At1D1609_47760 PF01032 FecCD transport family At1D1609_47770 PF00005 ABC transporter At1D1609_47790 PF01381 Helix-turn-helix At1D1609_47800 PF10114 Sensory domain found in PocR At1D1609_47800 PF12833 Helix-turn-helix domain At1D1609_47820 PF02653 Branched-chain amino acid transport system / permease component At1D1609_47840 PF00005 ABC transporter At1D1609_47840 PF12399 Branched-chain amino acid ATP-binding cassette transporter At1D1609_47850 PF00005 ABC transporter At1D1609_47860 PF00171 Aldehyde dehydrogenase family At1D1609_47870 PF03466 LysR substrate binding domain At1D1609_47870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_47880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1609_47890 PF00884 Sulfatase At1D1609_47890 PF12411 Choline sulfatase enzyme C terminal At1D1609_47930 PF07704 Rv0623-like transcription factor At1D1609_47980 PF11975 Family 4 glycosyl hydrolase C-terminal domain At1D1609_47980 PF02056 Family 4 glycosyl hydrolase At1D1609_47990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_48000 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48010 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48010 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_48020 PF00005 ABC transporter At1D1609_48020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_48030 PF02056 Family 4 glycosyl hydrolase At1D1609_48030 PF11975 Family 4 glycosyl hydrolase C-terminal domain At1D1609_48040 PF13533 Biotin-lipoyl like At1D1609_48050 PF00005 ABC transporter At1D1609_48090 PF00072 Response regulator receiver domain At1D1609_48100 PF00091 Tubulin/FtsZ family, GTPase domain At1D1609_48100 PF12327 FtsZ family, C-terminal domain At1D1609_48110 PF00392 Bacterial regulatory proteins, gntR family At1D1609_48110 PF07729 FCD domain At1D1609_48120 PF00701 Dihydrodipicolinate synthetase family At1D1609_48130 PF02615 Malate/L-lactate dehydrogenase At1D1609_48150 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48160 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48170 PF00005 ABC transporter At1D1609_48180 PF01266 FAD dependent oxidoreductase At1D1609_48200 PF05544 Proline racemase At1D1609_48210 PF00356 Bacterial regulatory proteins, lacI family At1D1609_48230 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_48250 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48260 PF00005 ABC transporter At1D1609_48270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_48270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_48280 PF03707 Bacterial signalling protein N terminal repeat At1D1609_48280 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_48280 PF00563 EAL domain At1D1609_48290 PF02530 Porin subfamily At1D1609_48300 PF01613 Flavin reductase like domain At1D1609_48310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_48310 PF03466 LysR substrate binding domain At1D1609_48330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region At1D1609_48330 PF00037 4Fe-4S binding domain At1D1609_48330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit At1D1609_48340 PF12838 4Fe-4S dicluster domain At1D1609_48340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain At1D1609_48340 PF00384 Molybdopterin oxidoreductase At1D1609_48340 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region At1D1609_48340 PF01568 Molydopterin dinucleotide binding domain At1D1609_48360 PF07690 Major Facilitator Superfamily At1D1609_48370 PF00701 Dihydrodipicolinate synthetase family At1D1609_48380 PF08450 SMP-30/Gluconolactonase/LRE-like region At1D1609_48400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_48410 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48420 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48420 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_48430 PF00005 ABC transporter At1D1609_48430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_48440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_48440 PF13378 Enolase C-terminal domain-like At1D1609_48460 PF00392 Bacterial regulatory proteins, gntR family At1D1609_48460 PF07729 FCD domain At1D1609_48470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_48480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48510 PF00005 ABC transporter At1D1609_48510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_48520 PF00459 Inositol monophosphatase family At1D1609_48540 PF17850 CysA C-terminal regulatory domain At1D1609_48540 PF00005 ABC transporter At1D1609_48550 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48590 PF05532 CsbD-like At1D1609_48610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain At1D1609_48610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain At1D1609_48620 PF03401 Tripartite tricarboxylate transporter family receptor At1D1609_48630 PF00005 ABC transporter At1D1609_48630 PF00664 ABC transporter transmembrane region At1D1609_48650 PF00005 ABC transporter At1D1609_48670 PF00577 Outer membrane usher protein At1D1609_48670 PF13954 PapC N-terminal domain At1D1609_48670 PF13953 PapC C-terminal domain At1D1609_48700 PF11791 Aconitate B N-terminal domain At1D1609_48700 PF06434 Aconitate hydratase 2 N-terminus At1D1609_48700 PF00330 Aconitase family (aconitate hydratase) At1D1609_48710 PF00132 Bacterial transferase hexapeptide (six repeats) At1D1609_48730 PF00356 Bacterial regulatory proteins, lacI family At1D1609_48750 PF00005 ABC transporter At1D1609_48760 PF02653 Branched-chain amino acid transport system / permease component At1D1609_48770 PF02653 Branched-chain amino acid transport system / permease component At1D1609_48780 PF01261 Xylose isomerase-like TIM barrel At1D1609_48800 PF01261 Xylose isomerase-like TIM barrel At1D1609_48820 PF00005 ABC transporter At1D1609_48830 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48840 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_48850 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_48860 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family At1D1609_48870 PF00557 Metallopeptidase family M24 At1D1609_48870 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_48880 PF02423 Ornithine cyclodeaminase/mu-crystallin family At1D1609_48890 PF00291 Pyridoxal-phosphate dependent enzyme At1D1609_48900 PF00392 Bacterial regulatory proteins, gntR family At1D1609_48900 PF00155 Aminotransferase class I and II At1D1609_48910 PF00202 Aminotransferase class-III At1D1609_48920 PF00171 Aldehyde dehydrogenase family At1D1609_48930 PF01037 Lrp/AsnC ligand binding domain At1D1609_48940 PF04199 Putative cyclase At1D1609_48950 PF07690 Major Facilitator Superfamily At1D1609_48960 PF00561 alpha/beta hydrolase fold At1D1609_48970 PF00005 ABC transporter At1D1609_48970 PF06472 ABC transporter transmembrane region 2 At1D1609_49050 PF07756 Protein of unknown function (DUF1612) At1D1609_49050 PF11972 HTH DNA binding domain At1D1609_49080 PF00580 UvrD/REP helicase N-terminal domain At1D1609_49080 PF13361 UvrD-like helicase C-terminal domain At1D1609_49140 PF02086 D12 class N6 adenine-specific DNA methyltransferase At1D1609_49170 PF01527 Transposase At1D1609_49180 PF00665 Integrase core domain At1D1609_49210 PF00440 Bacterial regulatory proteins, tetR family At1D1609_49280 PF07693 KAP family P-loop domain At1D1609_49300 PF00294 pfkB family carbohydrate kinase At1D1609_49320 PF13344 Haloacid dehalogenase-like hydrolase At1D1609_49330 PF00005 ABC transporter At1D1609_49330 PF17912 MalK OB fold domain At1D1609_49340 PF00158 Sigma-54 interaction domain At1D1609_49340 PF09370 Phosphoenolpyruvate hydrolase-like At1D1609_49340 PF02954 Bacterial regulatory protein, Fis family At1D1609_49370 PF09370 Phosphoenolpyruvate hydrolase-like At1D1609_49380 PF00890 FAD binding domain At1D1609_49390 PF03928 Haem-degrading At1D1609_49410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_49410 PF03466 LysR substrate binding domain At1D1609_49420 PF00230 Major intrinsic protein At1D1609_49430 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_49440 PF00491 Arginase family At1D1609_49450 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_49460 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_49470 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_49480 PF00005 ABC transporter At1D1609_49490 PF03466 LysR substrate binding domain At1D1609_49490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_49500 PF01037 Lrp/AsnC ligand binding domain At1D1609_49510 PF01636 Phosphotransferase enzyme family At1D1609_49520 PF00206 Lyase At1D1609_49520 PF10415 Fumarase C C-terminus At1D1609_49530 PF00701 Dihydrodipicolinate synthetase family At1D1609_49540 PF00171 Aldehyde dehydrogenase family At1D1609_49550 PF03447 Homoserine dehydrogenase, NAD binding domain At1D1609_49550 PF00742 Homoserine dehydrogenase At1D1609_49560 PF00005 ABC transporter At1D1609_49570 PF01546 Peptidase family M20/M25/M40 At1D1609_49580 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_49590 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_49600 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_49610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_49610 PF03466 LysR substrate binding domain At1D1609_49630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_49630 PF03466 LysR substrate binding domain At1D1609_49640 PF00893 Small Multidrug Resistance protein At1D1609_49650 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_49660 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_49670 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_49680 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_49690 PF00005 ABC transporter At1D1609_49720 PF07687 Peptidase dimerisation domain At1D1609_49720 PF01546 Peptidase family M20/M25/M40 At1D1609_49730 PF01053 Cys/Met metabolism PLP-dependent enzyme At1D1609_49750 PF00392 Bacterial regulatory proteins, gntR family At1D1609_49750 PF00155 Aminotransferase class I and II At1D1609_49770 PF00701 Dihydrodipicolinate synthetase family At1D1609_49780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1609_49780 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1609_49780 PF14579 Helix-hairpin-helix motif At1D1609_49780 PF02811 PHP domain At1D1609_49810 PF00440 Bacterial regulatory proteins, tetR family At1D1609_49820 PF00873 AcrB/AcrD/AcrF family At1D1609_49830 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_49830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_49840 PF00356 Bacterial regulatory proteins, lacI family At1D1609_49850 PF13407 Periplasmic binding protein domain At1D1609_49860 PF00005 ABC transporter At1D1609_49870 PF02653 Branched-chain amino acid transport system / permease component At1D1609_49880 PF01261 Xylose isomerase-like TIM barrel At1D1609_49890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_49890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_49910 PF00294 pfkB family carbohydrate kinase At1D1609_49920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1609_49920 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1609_49920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1609_49930 PF01261 Xylose isomerase-like TIM barrel At1D1609_49940 PF04962 KduI/IolB family At1D1609_49950 PF14552 Tautomerase enzyme At1D1609_49960 PF01380 SIS domain At1D1609_49960 PF01418 Helix-turn-helix domain, rpiR family At1D1609_49970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_49970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_49980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_49980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_49990 PF01261 Xylose isomerase-like TIM barrel At1D1609_50000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold At1D1609_50000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain At1D1609_50010 PF00356 Bacterial regulatory proteins, lacI family At1D1609_50010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family At1D1609_50020 PF03466 LysR substrate binding domain At1D1609_50020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_50040 PF00456 Transketolase, thiamine diphosphate binding domain At1D1609_50050 PF02779 Transketolase, pyrimidine binding domain At1D1609_50050 PF02780 Transketolase, C-terminal domain At1D1609_50060 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_50060 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_50070 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_50070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component At1D1609_50080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_50090 PF00005 ABC transporter At1D1609_50100 PF02653 Branched-chain amino acid transport system / permease component At1D1609_50110 PF13407 Periplasmic binding protein domain At1D1609_50120 PF04909 Amidohydrolase At1D1609_50150 PF01527 Transposase At1D1609_50160 PF13276 HTH-like domain At1D1609_50160 PF00665 Integrase core domain At1D1609_50180 PF13183 4Fe-4S dicluster domain At1D1609_50180 PF01565 FAD binding domain At1D1609_50180 PF02913 FAD linked oxidases, C-terminal domain At1D1609_50190 PF04909 Amidohydrolase At1D1609_50210 PF12833 Helix-turn-helix domain At1D1609_50210 PF12852 Cupin At1D1609_50240 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_50280 PF00501 AMP-binding enzyme At1D1609_50280 PF13193 AMP-binding enzyme C-terminal domain At1D1609_50280 PF00975 Thioesterase domain At1D1609_50280 PF00550 Phosphopantetheine attachment site At1D1609_50280 PF00668 Condensation domain At1D1609_50350 PF00550 Phosphopantetheine attachment site At1D1609_50350 PF00501 AMP-binding enzyme At1D1609_50350 PF13193 AMP-binding enzyme C-terminal domain At1D1609_50350 PF00668 Condensation domain At1D1609_50370 PF00665 Integrase core domain At1D1609_50370 PF13276 HTH-like domain At1D1609_50370 PF13333 Integrase core domain At1D1609_50400 PF03466 LysR substrate binding domain At1D1609_50400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_50410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain At1D1609_50410 PF13378 Enolase C-terminal domain-like At1D1609_50420 PF00356 Bacterial regulatory proteins, lacI family At1D1609_50430 PF03401 Tripartite tricarboxylate transporter family receptor At1D1609_50440 PF07331 Tripartite tricarboxylate transporter TctB family At1D1609_50450 PF01970 Tripartite tricarboxylate transporter TctA family At1D1609_50490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain At1D1609_50490 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_50500 PF00561 alpha/beta hydrolase fold At1D1609_50520 PF04752 ChaC-like protein At1D1609_50530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_50530 PF03466 LysR substrate binding domain At1D1609_50570 PF00664 ABC transporter transmembrane region At1D1609_50570 PF00005 ABC transporter At1D1609_50600 PF13333 Integrase core domain At1D1609_50600 PF00665 Integrase core domain At1D1609_50600 PF01527 Transposase At1D1609_50600 PF13276 HTH-like domain At1D1609_50720 PF04717 Type VI secretion system, phage-baseplate injector At1D1609_50760 PF05488 PAAR motif At1D1609_50760 PF05593 RHS Repeat At1D1609_50810 PF00589 Phage integrase family At1D1609_50810 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_50820 PF01443 Viral (Superfamily 1) RNA helicase At1D1609_50820 PF17841 BID domain of Bartonella effector protein (Bep) At1D1609_50820 PF03389 MobA/MobL family At1D1609_50870 PF00664 ABC transporter transmembrane region At1D1609_50870 PF00005 ABC transporter At1D1609_50920 PF03691 Uncharacterised protein family (UPF0167) At1D1609_50930 PF04229 GrpB protein At1D1609_50930 PF13673 Acetyltransferase (GNAT) domain At1D1609_50980 PF13614 AAA domain At1D1609_50990 PF02195 ParB-like nuclease domain At1D1609_50990 PF07506 RepB plasmid partitioning protein At1D1609_51000 PF11800 Replication protein C C-terminal region At1D1609_51000 PF03428 Replication protein C N-terminal domain At1D1609_51010 PF00239 Resolvase, N terminal domain At1D1609_51020 PF00589 Phage integrase family At1D1609_51050 PF13700 Domain of unknown function (DUF4158) At1D1609_51050 PF01526 Tn3 transposase DDE domain At1D1609_51060 PF01464 Transglycosylase SLT domain At1D1609_51070 PF04956 TrbC/VIRB2 family At1D1609_51075 PF05101 Type IV secretory pathway, VirB3-like protein At1D1609_51080 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1609_51100 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1609_51110 PF17413 Outer membrane lipoprotein virB7 At1D1609_51120 PF04335 VirB8 protein At1D1609_51130 PF03524 Conjugal transfer protein At1D1609_51140 PF03743 Bacterial conjugation TrbI-like protein At1D1609_51150 PF00437 Type II/IV secretion system protein At1D1609_51160 PF00072 Response regulator receiver domain At1D1609_51160 PF00486 Transcriptional regulatory protein, C terminal At1D1609_51180 PF03050 Transposase IS66 family At1D1609_51180 PF13007 Transposase C of IS166 homeodomain At1D1609_51180 PF13817 IS66 C-terminal element At1D1609_51180 PF13005 zinc-finger binding domain of transposase IS66 At1D1609_51190 PF13005 zinc-finger binding domain of transposase IS66 At1D1609_51190 PF03050 Transposase IS66 family At1D1609_51190 PF13007 Transposase C of IS166 homeodomain At1D1609_51190 PF13817 IS66 C-terminal element At1D1609_51200 PF05717 IS66 Orf2 like protein At1D1609_51210 PF01527 Transposase At1D1609_51220 PF01548 Transposase At1D1609_51220 PF02371 Transposase IS116/IS110/IS902 family At1D1609_51230 PF13005 zinc-finger binding domain of transposase IS66 At1D1609_51230 PF13817 IS66 C-terminal element At1D1609_51230 PF13007 Transposase C of IS166 homeodomain At1D1609_51230 PF03050 Transposase IS66 family At1D1609_51250 PF00589 Phage integrase family At1D1609_51250 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_51260 PF00589 Phage integrase family At1D1609_51260 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_51270 PF02899 Phage integrase, N-terminal SAM-like domain At1D1609_51270 PF00589 Phage integrase family At1D1609_51300 PF07181 VirC2 protein At1D1609_51310 PF07015 VirC1 protein At1D1609_51320 PF07328 T-DNA border endonuclease VirD1 At1D1609_51330 PF03432 Relaxase/Mobilisation nuclease domain At1D1609_51350 PF02534 Type IV secretory system Conjugative DNA transfer At1D1609_51370 PF12189 Single-strand DNA-binding protein At1D1609_51380 PF07229 VirE2 At1D1609_51410 PF00216 Bacterial DNA-binding protein At1D1609_51430 PF00313 'Cold-shock' DNA-binding domain At1D1609_51470 PF10502 Signal peptidase, peptidase S26 At1D1609_51510 PF13419 Haloacid dehalogenase-like hydrolase At1D1609_51530 PF01980 tRNA-methyltransferase O At1D1609_51550 PF01695 IstB-like ATP binding protein At1D1609_51560 PF00665 Integrase core domain At1D1609_51570 PF02371 Transposase IS116/IS110/IS902 family At1D1609_51570 PF01548 Transposase At1D1609_51590 PF00665 Integrase core domain At1D1609_51610 PF02027 RolB/RolC glucosidase family At1D1609_51620 PF01425 Amidase At1D1609_51630 PF01593 Flavin containing amine oxidoreductase At1D1609_51630 PF02027 RolB/RolC glucosidase family At1D1609_51650 PF02027 RolB/RolC glucosidase family At1D1609_51660 PF02027 RolB/RolC glucosidase family At1D1609_51670 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain At1D1609_51680 PF03050 Transposase IS66 family At1D1609_51680 PF13817 IS66 C-terminal element At1D1609_51680 PF13007 Transposase C of IS166 homeodomain At1D1609_51680 PF13005 zinc-finger binding domain of transposase IS66 At1D1609_51720 PF01380 SIS domain At1D1609_51730 PF00300 Histidine phosphatase superfamily (branch 1) At1D1609_51730 PF00106 short chain dehydrogenase At1D1609_51740 PF00557 Metallopeptidase family M24 At1D1609_51740 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_51790 PF00216 Bacterial DNA-binding protein At1D1609_51820 PF02534 Type IV secretory system Conjugative DNA transfer At1D1609_51830 PF06412 Conjugal transfer protein TraD At1D1609_51840 PF07820 TraC-like protein At1D1609_51850 PF01443 Viral (Superfamily 1) RNA helicase At1D1609_51850 PF17841 BID domain of Bartonella effector protein (Bep) At1D1609_51850 PF03389 MobA/MobL family At1D1609_51860 PF10502 Signal peptidase, peptidase S26 At1D1609_51870 PF00795 Carbon-nitrogen hydrolase At1D1609_51880 PF06871 TraH_2 At1D1609_51900 PF09228 Prokaryotic Transcriptional repressor TraM At1D1609_51920 PF00196 Bacterial regulatory proteins, luxR family At1D1609_51920 PF03472 Autoinducer binding domain At1D1609_51930 PF00005 ABC transporter At1D1609_51930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_51940 PF12911 N-terminal TM domain of oligopeptide transport permease C At1D1609_51940 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_51950 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_51960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_51980 PF02423 Ornithine cyclodeaminase/mu-crystallin family At1D1609_52010 PF07992 Pyridine nucleotide-disulphide oxidoreductase At1D1609_52010 PF04324 BFD-like [2Fe-2S] binding domain At1D1609_52030 PF01266 FAD dependent oxidoreductase At1D1609_52040 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_52050 PF00005 ABC transporter At1D1609_52060 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52070 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_52080 PF03466 LysR substrate binding domain At1D1609_52100 PF00196 Bacterial regulatory proteins, luxR family At1D1609_52100 PF03472 Autoinducer binding domain At1D1609_52110 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52120 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52130 PF00005 ABC transporter At1D1609_52130 PF08402 TOBE domain At1D1609_52150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_52150 PF00672 HAMP domain At1D1609_52180 PF08402 TOBE domain At1D1609_52180 PF00005 ABC transporter At1D1609_52190 PF01321 Creatinase/Prolidase N-terminal domain At1D1609_52190 PF00557 Metallopeptidase family M24 At1D1609_52200 PF00294 pfkB family carbohydrate kinase At1D1609_52230 PF00106 short chain dehydrogenase At1D1609_52250 PF00920 Dehydratase family At1D1609_52260 PF00248 Aldo/keto reductase family At1D1609_52290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle At1D1609_52310 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_52320 PF00005 ABC transporter At1D1609_52330 PF01266 FAD dependent oxidoreductase At1D1609_52340 PF05378 Hydantoinase/oxoprolinase N-terminal region At1D1609_52340 PF01968 Hydantoinase/oxoprolinase At1D1609_52380 PF00455 DeoR C terminal sensor domain At1D1609_52380 PF08220 DeoR-like helix-turn-helix domain At1D1609_52400 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region At1D1609_52420 PF00005 ABC transporter At1D1609_52440 PF03743 Bacterial conjugation TrbI-like protein At1D1609_52460 PF03524 Conjugal transfer protein At1D1609_52470 PF04335 VirB8 protein At1D1609_52480 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1609_52490 PF10907 Protein of unknown function (DUF2749) At1D1609_52510 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1609_52520 PF05101 Type IV secretory pathway, VirB3-like protein At1D1609_52530 PF04956 TrbC/VIRB2 family At1D1609_52540 PF00437 Type II/IV secretion system protein At1D1609_52550 PF00765 Autoinducer synthase At1D1609_52560 PF13614 AAA domain At1D1609_52560 PF00376 MerR family regulatory protein At1D1609_52570 PF07506 RepB plasmid partitioning protein At1D1609_52570 PF02195 ParB-like nuclease domain At1D1609_52580 PF03428 Replication protein C N-terminal domain At1D1609_52580 PF11800 Replication protein C C-terminal region At1D1609_52590 PF01527 Transposase At1D1609_52610 PF00563 EAL domain At1D1609_52610 PF01590 GAF domain At1D1609_52610 PF00360 Phytochrome region At1D1609_52610 PF00990 Diguanylate cyclase, GGDEF domain At1D1609_52630 PF00313 'Cold-shock' DNA-binding domain At1D1609_52710 PF07690 Major Facilitator Superfamily At1D1609_52760 PF00672 HAMP domain At1D1609_52760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_52770 PF01966 HD domain At1D1609_52770 PF11871 Domain of unknown function (DUF3391) At1D1609_52780 PF01266 FAD dependent oxidoreductase At1D1609_52780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase At1D1609_52790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain At1D1609_52790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain At1D1609_52810 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52820 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_52830 PF08402 TOBE domain At1D1609_52830 PF00005 ABC transporter At1D1609_52850 PF04198 Putative sugar-binding domain At1D1609_52870 PF13545 Crp-like helix-turn-helix domain At1D1609_52870 PF00027 Cyclic nucleotide-binding domain At1D1609_52880 PF00196 Bacterial regulatory proteins, luxR family At1D1609_52880 PF00072 Response regulator receiver domain At1D1609_52890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_52890 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_52890 PF00989 PAS fold At1D1609_52900 PF00561 alpha/beta hydrolase fold At1D1609_52920 PF04752 ChaC-like protein At1D1609_52930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_52930 PF03466 LysR substrate binding domain At1D1609_52940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily At1D1609_52970 PF07969 Amidohydrolase family At1D1609_53030 PF08447 PAS fold At1D1609_53030 PF13426 PAS domain At1D1609_53030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_53040 PF03466 LysR substrate binding domain At1D1609_53040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_53070 PF00701 Dihydrodipicolinate synthetase family At1D1609_53090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_53090 PF03466 LysR substrate binding domain At1D1609_53100 PF01266 FAD dependent oxidoreductase At1D1609_53100 PF08669 Glycine cleavage T-protein C-terminal barrel domain At1D1609_53100 PF16350 FAD dependent oxidoreductase central domain At1D1609_53100 PF01571 Aminomethyltransferase folate-binding domain At1D1609_53110 PF00766 Electron transfer flavoprotein FAD-binding domain At1D1609_53110 PF01012 Electron transfer flavoprotein domain At1D1609_53120 PF01012 Electron transfer flavoprotein domain At1D1609_53140 PF00551 Formyl transferase At1D1609_53150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain At1D1609_53150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain At1D1609_53190 PF00571 CBS domain At1D1609_53190 PF00005 ABC transporter At1D1609_53200 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_53230 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_53230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain At1D1609_53240 PF00175 Oxidoreductase NAD-binding domain At1D1609_53240 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_53240 PF00970 Oxidoreductase FAD-binding domain At1D1609_53250 PF00355 Rieske [2Fe-2S] domain At1D1609_53250 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At1D1609_53280 PF03358 NADPH-dependent FMN reductase At1D1609_53320 PF00571 CBS domain At1D1609_53320 PF00005 ABC transporter At1D1609_53330 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_53370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_53390 PF01012 Electron transfer flavoprotein domain At1D1609_53400 PF00766 Electron transfer flavoprotein FAD-binding domain At1D1609_53400 PF01012 Electron transfer flavoprotein domain At1D1609_53410 PF00107 Zinc-binding dehydrogenase At1D1609_53410 PF08240 Alcohol dehydrogenase GroES-like domain At1D1609_53420 PF04828 Glutathione-dependent formaldehyde-activating enzyme At1D1609_53440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_53440 PF03466 LysR substrate binding domain At1D1609_53450 PF04069 Substrate binding domain of ABC-type glycine betaine transport system At1D1609_53460 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_53470 PF00005 ABC transporter At1D1609_53480 PF01266 FAD dependent oxidoreductase At1D1609_53500 PF03466 LysR substrate binding domain At1D1609_53500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_53510 PF00355 Rieske [2Fe-2S] domain At1D1609_53510 PF00848 Ring hydroxylating alpha subunit (catalytic domain) At1D1609_53520 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_53520 PF00175 Oxidoreductase NAD-binding domain At1D1609_53520 PF00970 Oxidoreductase FAD-binding domain At1D1609_53530 PF00392 Bacterial regulatory proteins, gntR family At1D1609_53530 PF00155 Aminotransferase class I and II At1D1609_53590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_53610 PF03480 Bacterial extracellular solute-binding protein, family 7 At1D1609_53620 PF00171 Aldehyde dehydrogenase family At1D1609_53630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain At1D1609_53630 PF00205 Thiamine pyrophosphate enzyme, central domain At1D1609_53630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain At1D1609_53640 PF01842 ACT domain At1D1609_53640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain At1D1609_53640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain At1D1609_53680 PF01494 FAD binding domain At1D1609_53690 PF00465 Iron-containing alcohol dehydrogenase At1D1609_53700 PF04444 Catechol dioxygenase N terminus At1D1609_53700 PF00775 Dioxygenase At1D1609_53720 PF04199 Putative cyclase At1D1609_53740 PF05853 beta-keto acid cleavage enzyme At1D1609_53760 PF00941 FAD binding domain in molybdopterin dehydrogenase At1D1609_53760 PF03450 CO dehydrogenase flavoprotein C-terminal domain At1D1609_53770 PF00111 2Fe-2S iron-sulfur cluster binding domain At1D1609_53770 PF01799 [2Fe-2S] binding domain At1D1609_53780 PF07729 FCD domain At1D1609_53780 PF00392 Bacterial regulatory proteins, gntR family At1D1609_53810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component At1D1609_53820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase At1D1609_53820 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain At1D1609_53840 PF01494 FAD binding domain At1D1609_53860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_53860 PF03466 LysR substrate binding domain At1D1609_53870 PF00561 alpha/beta hydrolase fold At1D1609_53890 PF12833 Helix-turn-helix domain At1D1609_53890 PF12852 Cupin At1D1609_53900 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_53910 PF00005 ABC transporter At1D1609_53940 PF00266 Aminotransferase class-V At1D1609_53950 PF00497 Bacterial extracellular solute-binding proteins, family 3 At1D1609_53960 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_53970 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_53980 PF00005 ABC transporter At1D1609_54010 PF07687 Peptidase dimerisation domain At1D1609_54010 PF01546 Peptidase family M20/M25/M40 At1D1609_54020 PF03466 LysR substrate binding domain At1D1609_54020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_54030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase At1D1609_54030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase At1D1609_54050 PF03472 Autoinducer binding domain At1D1609_54050 PF00196 Bacterial regulatory proteins, luxR family At1D1609_54110 PF17762 HTH domain found in ParB protein At1D1609_54110 PF02195 ParB-like nuclease domain At1D1609_54160 PF08401 Domain of unknown function (DUF1738) At1D1609_54160 PF18818 Metallopeptidase superfamily domain At1D1609_54160 PF13362 Toprim domain At1D1609_54180 PF05284 Protein of unknown function (DUF736) At1D1609_54210 PF05406 WGR domain At1D1609_54220 PF02534 Type IV secretory system Conjugative DNA transfer At1D1609_54230 PF06412 Conjugal transfer protein TraD At1D1609_54240 PF07820 TraC-like protein At1D1609_54250 PF01443 Viral (Superfamily 1) RNA helicase At1D1609_54250 PF17841 BID domain of Bartonella effector protein (Bep) At1D1609_54250 PF03389 MobA/MobL family At1D1609_54260 PF00795 Carbon-nitrogen hydrolase At1D1609_54270 PF06871 TraH_2 At1D1609_54310 PF01381 Helix-turn-helix At1D1609_54320 PF09228 Prokaryotic Transcriptional repressor TraM At1D1609_54330 PF03472 Autoinducer binding domain At1D1609_54330 PF00196 Bacterial regulatory proteins, luxR family At1D1609_54340 PF03743 Bacterial conjugation TrbI-like protein At1D1609_54350 PF08139 Prokaryotic membrane lipoprotein lipid attachment site At1D1609_54360 PF03524 Conjugal transfer protein At1D1609_54370 PF04335 VirB8 protein At1D1609_54380 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1609_54390 PF10907 Protein of unknown function (DUF2749) At1D1609_54410 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1609_54420 PF05101 Type IV secretory pathway, VirB3-like protein At1D1609_54430 PF04956 TrbC/VIRB2 family At1D1609_54440 PF00437 Type II/IV secretion system protein At1D1609_54450 PF00765 Autoinducer synthase At1D1609_54460 PF01526 Tn3 transposase DDE domain At1D1609_54460 PF13700 Domain of unknown function (DUF4158) At1D1609_54480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase At1D1609_54480 PF00512 His Kinase A (phospho-acceptor) domain At1D1609_54500 PF06903 VirK protein At1D1609_54510 PF00067 Cytochrome P450 At1D1609_54540 PF13817 IS66 C-terminal element At1D1609_54540 PF03050 Transposase IS66 family At1D1609_54540 PF13005 zinc-finger binding domain of transposase IS66 At1D1609_54540 PF13007 Transposase C of IS166 homeodomain At1D1609_54740 PF04079 Segregation and condensation complex subunit ScpB At1D1609_54760 PF00589 Phage integrase family At1D1609_54770 PF00672 HAMP domain At1D1609_54770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_54790 PF13700 Domain of unknown function (DUF4158) At1D1609_54790 PF01526 Tn3 transposase DDE domain At1D1609_54870 PF00376 MerR family regulatory protein At1D1609_54870 PF13614 AAA domain At1D1609_54880 PF02195 ParB-like nuclease domain At1D1609_54880 PF07506 RepB plasmid partitioning protein At1D1609_54890 PF03428 Replication protein C N-terminal domain At1D1609_54890 PF11800 Replication protein C C-terminal region At1D1609_54950 PF00589 Phage integrase family At1D1609_54970 PF04079 Segregation and condensation complex subunit ScpB At1D1609_55040 PF02796 Helix-turn-helix domain of resolvase At1D1609_55040 PF00239 Resolvase, N terminal domain At1D1609_55050 PF01526 Tn3 transposase DDE domain At1D1609_55050 PF13700 Domain of unknown function (DUF4158) At1D1609_55160 PF01336 OB-fold nucleic acid binding domain At1D1609_55160 PF02811 PHP domain At1D1609_55160 PF14579 Helix-hairpin-helix motif At1D1609_55160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain At1D1609_55160 PF07733 Bacterial DNA polymerase III alpha NTPase domain At1D1609_55340 PF17762 HTH domain found in ParB protein At1D1609_55340 PF02195 ParB-like nuclease domain At1D1609_55420 PF00392 Bacterial regulatory proteins, gntR family At1D1609_55420 PF07729 FCD domain At1D1609_55430 PF08402 TOBE domain At1D1609_55430 PF00005 ABC transporter At1D1609_55440 PF00171 Aldehyde dehydrogenase family At1D1609_55470 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_55480 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_55500 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain At1D1609_55500 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain At1D1609_55510 PF01584 CheW-like domain At1D1609_55520 PF08447 PAS fold At1D1609_55520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_55520 PF13426 PAS domain At1D1609_55560 PF05284 Protein of unknown function (DUF736) At1D1609_55610 PF03050 Transposase IS66 family At1D1609_55610 PF13007 Transposase C of IS166 homeodomain At1D1609_55610 PF13005 zinc-finger binding domain of transposase IS66 At1D1609_55610 PF13817 IS66 C-terminal element At1D1609_55620 PF05717 IS66 Orf2 like protein At1D1609_55640 PF02371 Transposase IS116/IS110/IS902 family At1D1609_55640 PF01548 Transposase At1D1609_55650 PF13700 Domain of unknown function (DUF4158) At1D1609_55650 PF01526 Tn3 transposase DDE domain At1D1609_55660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family At1D1609_55700 PF03466 LysR substrate binding domain At1D1609_55700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_55720 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_55730 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_55740 PF00005 ABC transporter At1D1609_55740 PF08402 TOBE domain At1D1609_55760 PF00155 Aminotransferase class I and II At1D1609_55770 PF01370 NAD dependent epimerase/dehydratase family At1D1609_55780 PF01266 FAD dependent oxidoreductase At1D1609_55810 PF00664 ABC transporter transmembrane region At1D1609_55810 PF00005 ABC transporter At1D1609_55820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion At1D1609_55820 PF00529 HlyD membrane-fusion protein of T1SS At1D1609_55830 PF00356 Bacterial regulatory proteins, lacI family At1D1609_55840 PF01547 Bacterial extracellular solute-binding protein At1D1609_55850 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_55860 PF00528 Binding-protein-dependent transport system inner membrane component At1D1609_55870 PF07944 Beta-L-arabinofuranosidase, GH127 At1D1609_55880 PF00005 ABC transporter At1D1609_55880 PF17912 MalK OB fold domain At1D1609_55890 PF14525 AraC-binding-like domain At1D1609_55890 PF12833 Helix-turn-helix domain At1D1609_55900 PF00672 HAMP domain At1D1609_55900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain At1D1609_55910 PF01584 CheW-like domain At1D1609_55920 PF11871 Domain of unknown function (DUF3391) At1D1609_55920 PF01966 HD domain At1D1609_55940 PF14525 AraC-binding-like domain At1D1609_55940 PF12833 Helix-turn-helix domain At1D1609_55950 PF12833 Helix-turn-helix domain At1D1609_55960 PF01613 Flavin reductase like domain At1D1609_55970 PF00296 Luciferase-like monooxygenase At1D1609_55980 PF00083 Sugar (and other) transporter At1D1609_55990 PF00171 Aldehyde dehydrogenase family At1D1609_56000 PF03466 LysR substrate binding domain At1D1609_56000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family At1D1609_56020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase At1D1609_56030 PF01965 DJ-1/PfpI family At1D1609_56050 PF12833 Helix-turn-helix domain At1D1609_56050 PF01965 DJ-1/PfpI family At1D1609_56060 PF00857 Isochorismatase family At1D1609_56070 PF12706 Beta-lactamase superfamily domain At1D1609_56090 PF01965 DJ-1/PfpI family At1D1609_56100 PF13333 Integrase core domain At1D1609_56100 PF13276 HTH-like domain At1D1609_56100 PF00665 Integrase core domain At1D1609_56110 PF01527 Transposase At1D1609_56190 PF02195 ParB-like nuclease domain At1D1609_56190 PF17762 HTH domain found in ParB protein At1D1609_56210 PF18818 Metallopeptidase superfamily domain At1D1609_56210 PF13362 Toprim domain At1D1609_56210 PF08401 Domain of unknown function (DUF1738) At1D1609_56230 PF05284 Protein of unknown function (DUF736) At1D1609_56260 PF00565 Staphylococcal nuclease homologue At1D1609_56270 PF05406 WGR domain At1D1609_56290 PF02534 Type IV secretory system Conjugative DNA transfer At1D1609_56300 PF06412 Conjugal transfer protein TraD At1D1609_56310 PF07820 TraC-like protein At1D1609_56320 PF03389 MobA/MobL family At1D1609_56320 PF17841 BID domain of Bartonella effector protein (Bep) At1D1609_56320 PF01443 Viral (Superfamily 1) RNA helicase At1D1609_56330 PF10502 Signal peptidase, peptidase S26 At1D1609_56340 PF00795 Carbon-nitrogen hydrolase At1D1609_56350 PF06871 TraH_2 At1D1609_56360 PF12728 Helix-turn-helix domain At1D1609_56360 PF02661 Fic/DOC family At1D1609_56370 PF01381 Helix-turn-helix At1D1609_56380 PF09228 Prokaryotic Transcriptional repressor TraM At1D1609_56390 PF03472 Autoinducer binding domain At1D1609_56390 PF00196 Bacterial regulatory proteins, luxR family At1D1609_56400 PF03743 Bacterial conjugation TrbI-like protein At1D1609_56410 PF08139 Prokaryotic membrane lipoprotein lipid attachment site At1D1609_56420 PF03524 Conjugal transfer protein At1D1609_56430 PF04335 VirB8 protein At1D1609_56440 PF04610 TrbL/VirB6 plasmid conjugal transfer protein At1D1609_56450 PF10907 Protein of unknown function (DUF2749) At1D1609_56470 PF03135 CagE, TrbE, VirB family, component of type IV transporter system At1D1609_56480 PF05101 Type IV secretory pathway, VirB3-like protein At1D1609_56490 PF04956 TrbC/VIRB2 family At1D1609_56500 PF00437 Type II/IV secretion system protein At1D1609_56510 PF00765 Autoinducer synthase