locus-tag	class	description
AT6N2_C0003	COG2226	methyltransferase
AT6N2_C0009	COG4106	trans-aconitate 2-methyltransferase activity
AT6N2_C0016	COG3023	N-Acetylmuramoyl-L-alanine amidase
AT6N2_C0021	COG0754	glutathionylspermidine amidase activity
AT6N2_C0023	COG3766	membrane
AT6N2_C0025	COG0275	rRNA processing
AT6N2_C0026	COG2001	Belongs to the MraZ family
AT6N2_C0030	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AT6N2_C0033	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT6N2_C0034	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AT6N2_C0036	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AT6N2_C0038	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AT6N2_C0039	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AT6N2_C0041	COG3300	MHYT domain
AT6N2_C0041	COG5001	Diguanylate cyclase
AT6N2_C0042	COG0477	Major facilitator Superfamily
AT6N2_C0045	COG1181	Belongs to the D-alanine--D-alanine ligase family
AT6N2_C0046	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AT6N2_C0047	COG0849	cell division
AT6N2_C0048	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AT6N2_C0052	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT6N2_C0054	COG0497	DNA recombination
AT6N2_C0055	COG1280	lysine exporter protein (LysE YggA)
AT6N2_C0056	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AT6N2_C0059	COG1247	-acetyltransferase
AT6N2_C0062	COG0583	DNA-binding transcription factor activity
AT6N2_C0063	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT6N2_C0066	COG0835	chemotaxis
AT6N2_C0068	COG1999	signal sequence binding
AT6N2_C0069	COG2264	protein methyltransferase activity
AT6N2_C0076	COG1335	isochorismatase
AT6N2_C0090	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT6N2_C0091	COG0277	FAD linked oxidase domain protein
AT6N2_C0098	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AT6N2_C0101	COG0330	HflC and HflK could
AT6N2_C0102	COG0330	HflC and HflK could
AT6N2_C0105	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C0108	COG3830	Belongs to the UPF0237 family
AT6N2_C0108	COG0560	Phosphoserine phosphatase
AT6N2_C0109	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AT6N2_C0111	COG0028	Belongs to the TPP enzyme family
AT6N2_C0112	COG0440	acetolactate synthase activity
AT6N2_C0115	COG0656	L-ascorbic acid biosynthetic process
AT6N2_C0127	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT6N2_C0129	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AT6N2_C0130	COG1252	NADH dehydrogenase
AT6N2_C0131	COG1064	alcohol dehydrogenase
AT6N2_C0132	COG2207	Transcriptional regulator
AT6N2_C0134	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AT6N2_C0136	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT6N2_C0137	COG1840	ABC-type Fe3 transport system, periplasmic component
AT6N2_C0140	COG3842	ATPase activity
AT6N2_C0142	COG3706	GGDEF domain
AT6N2_C0146	COG0484	heat shock protein binding
AT6N2_C0150	COG2382	esterase
AT6N2_C0151	COG0556	nucleotide-excision repair
AT6N2_C0153	COG0454	-acetyltransferase
AT6N2_C0153	COG0456	acetyltransferase
AT6N2_C0156	COG2910	NAD(P)H-binding
AT6N2_C0159	COG1607	acyl-coa hydrolase
AT6N2_C0160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT6N2_C0163	COG3895	Periplasmic Protein
AT6N2_C0166	COG0861	Integral membrane protein TerC family
AT6N2_C0167	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AT6N2_C0169	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AT6N2_C0172	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AT6N2_C0173	COG0081	regulation of translation
AT6N2_C0174	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AT6N2_C0175	COG0222	ribosome binding
AT6N2_C0176	COG0085	RNA polymerase activity
AT6N2_C0177	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AT6N2_C0184	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AT6N2_C0185	COG0049	tRNA binding
AT6N2_C0186	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AT6N2_C0187	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AT6N2_C0188	COG0051	transcription antitermination factor activity, RNA binding
AT6N2_C0189	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AT6N2_C0191	COG0088	Forms part of the polypeptide exit tunnel
AT6N2_C0192	COG0089	rRNA binding
AT6N2_C0194	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AT6N2_C0195	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AT6N2_C0196	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AT6N2_C0198	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AT6N2_C0200	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AT6N2_C0201	COG0255	Belongs to the universal ribosomal protein uL29 family
AT6N2_C0202	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AT6N2_C0204	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AT6N2_C0205	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AT6N2_C0207	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AT6N2_C0208	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AT6N2_C0209	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AT6N2_C0210	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AT6N2_C0211	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AT6N2_C0213	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AT6N2_C0215	COG0200	Binds to the 23S rRNA
AT6N2_C0217	COG0201	protein transport
AT6N2_C0218	COG0563	adenylate kinase activity
AT6N2_C0220	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AT6N2_C0221	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AT6N2_C0222	COG0202	RNA polymerase activity
AT6N2_C0224	COG0203	ribosomal protein L17
AT6N2_C0226	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AT6N2_C0227	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AT6N2_C0228	COG0129	dihydroxy-acid dehydratase activity
AT6N2_C0231	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT6N2_C0232	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AT6N2_C0239	COG2390	Transcriptional regulator
AT6N2_C0243	COG1175	transmembrane transport
AT6N2_C0244	COG0395	ABC-type sugar transport system, permease component
AT6N2_C0249	COG1069	ribulokinase activity
AT6N2_C0256	COG1131	(ABC) transporter
AT6N2_C0258	COG0842	Transport permease protein
AT6N2_C0260	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AT6N2_C0263	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AT6N2_C0265	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AT6N2_C0267	COG2205	protein histidine kinase activity
AT6N2_C0267	COG2202	Pas domain
AT6N2_C0270	COG1573	uracil-dna glycosylase
AT6N2_C0271	COG1522	sequence-specific DNA binding
AT6N2_C0273	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT6N2_C0276	COG5425	PFAM Usg family protein
AT6N2_C0278	COG4215	(ABC) transporter
AT6N2_C0280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_C0282	COG2313	pseudouridylate synthase activity
AT6N2_C0283	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_C0284	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AT6N2_C0287	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AT6N2_C0292	COG0538	isocitrate dehydrogenase activity
AT6N2_C0295	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AT6N2_C0297	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AT6N2_C0302	COG1280	lysine exporter protein (LysE YggA)
AT6N2_C0306	COG0861	Integral membrane protein TerC family
AT6N2_C0308	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AT6N2_C0309	COG2066	Belongs to the glutaminase family
AT6N2_C0310	COG0037	tRNA processing
AT6N2_C0311	COG0483	inositol monophosphate 1-phosphatase activity
AT6N2_C0312	COG0483	inositol monophosphate 1-phosphatase activity
AT6N2_C0313	COG2814	Major facilitator Superfamily
AT6N2_C0315	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AT6N2_C0321	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AT6N2_C0322	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT6N2_C0326	COG0047	phosphoribosylformylglycinamidine synthase activity
AT6N2_C0328	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AT6N2_C0329	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AT6N2_C0331	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AT6N2_C0338	COG0513	Belongs to the DEAD box helicase family
AT6N2_C0339	COG0739	heme binding
AT6N2_C0340	COG2833	Protein of unknown function (DUF455)
AT6N2_C0342	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AT6N2_C0344	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AT6N2_C0346	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AT6N2_C0348	COG2945	thiolester hydrolase activity
AT6N2_C0350	COG1104	cysteine desulfurase activity
AT6N2_C0351	COG0719	Fe-S assembly protein
AT6N2_C0353	COG0396	ATPase activity
AT6N2_C0355	COG0719	Fe-S assembly protein
AT6N2_C0357	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AT6N2_C0358	COG2151	metal-sulfur cluster biosynthetic enzyme
AT6N2_C0363	COG0577	efflux transmembrane transporter activity
AT6N2_C0363	COG1136	(ABC) transporter
AT6N2_C0364	COG0577	efflux transmembrane transporter activity
AT6N2_C0364	COG1136	(ABC) transporter
AT6N2_C0368	COG0582	viral genome integration into host DNA
AT6N2_C0391	COG1061	Type III restriction enzyme res subunit
AT6N2_C0408	COG0616	signal peptide processing
AT6N2_C0421	COG0393	Putative heavy-metal-binding
AT6N2_C0441	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT6N2_C0443	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AT6N2_C0452	COG1278	Cold shock
AT6N2_C0457	COG0785	Cytochrome C biogenesis protein
AT6N2_C0458	COG0679	Auxin Efflux Carrier
AT6N2_C0459	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT6N2_C0460	COG1183	phosphatidylcholine synthase activity
AT6N2_C0462	COG3845	ABC transporter
AT6N2_C0463	COG4603	Belongs to the binding-protein-dependent transport system permease family
AT6N2_C0469	COG2186	Transcriptional regulator
AT6N2_C0470	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AT6N2_C0472	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AT6N2_C0478	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AT6N2_C0481	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AT6N2_C0483	COG0697	spore germination
AT6N2_C0492	COG0174	glutamine synthetase
AT6N2_C0493	COG0347	Belongs to the P(II) protein family
AT6N2_C0494	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AT6N2_C0494	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AT6N2_C0496	COG0583	DNA-binding transcription factor activity
AT6N2_C0504	COG1760	l-serine dehydratase
AT6N2_C0510	COG0517	IMP dehydrogenase activity
AT6N2_C0510	COG0516	GMP reductase activity
AT6N2_C0512	COG1752	Esterase of the alpha-beta hydrolase superfamily
AT6N2_C0513	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AT6N2_C0515	COG0302	gtp cyclohydrolase
AT6N2_C0518	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AT6N2_C0520	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AT6N2_C0531	COG0628	permease
AT6N2_C0532	COG1132	(ABC) transporter
AT6N2_C0535	COG1914	H( )-stimulated, divalent metal cation uptake system
AT6N2_C0536	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AT6N2_C0538	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AT6N2_C0539	COG0589	response to stress
AT6N2_C0540	COG1058	Belongs to the CinA family
AT6N2_C0540	COG1546	Belongs to the CinA family
AT6N2_C0541	COG0655	NAD(P)H dehydrogenase (quinone) activity
AT6N2_C0551	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AT6N2_C0553	COG0525	valine-tRNA ligase activity
AT6N2_C0558	COG0316	Belongs to the HesB IscA family
AT6N2_C0559	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AT6N2_C0561	COG0018	arginyl-trna synthetase
AT6N2_C0564	COG1472	Belongs to the glycosyl hydrolase 3 family
AT6N2_C0565	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AT6N2_C0567	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AT6N2_C0568	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AT6N2_C0570	COG0805	protein transport
AT6N2_C0571	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AT6N2_C0572	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AT6N2_C0573	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AT6N2_C0575	COG0739	heme binding
AT6N2_C0577	COG1763	Mo-molybdopterin cofactor biosynthetic process
AT6N2_C0578	COG0746	molybdenum cofactor guanylyltransferase activity
AT6N2_C0579	COG2814	Major facilitator Superfamily
AT6N2_C0582	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AT6N2_C0584	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AT6N2_C0584	COG0475	glutathione-regulated potassium exporter activity
AT6N2_C0586	COG3706	GGDEF domain
AT6N2_C0588	COG0303	'Molybdopterin
AT6N2_C0589	COG0315	cyclic pyranopterin monophosphate synthase activity
AT6N2_C0590	COG0134	indole-3-glycerol-phosphate synthase activity
AT6N2_C0591	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AT6N2_C0594	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AT6N2_C0598	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AT6N2_C0599	COG0343	queuine tRNA-ribosyltransferase activity
AT6N2_C0600	COG0512	Glutamine amidotransferase of anthranilate synthase
AT6N2_C0600	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AT6N2_C0603	COG0318	PFAM AMP-dependent synthetase and ligase
AT6N2_C0607	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AT6N2_C0609	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AT6N2_C0615	COG0544	peptidyl-prolyl cis-trans isomerase activity
AT6N2_C0622	COG1368	sulfuric ester hydrolase activity
AT6N2_C0625	COG0823	Involved in the tonB-independent uptake of proteins
AT6N2_C0626	COG0778	Nitroreductase
AT6N2_C0630	COG0280	phosphate acetyltransferase
AT6N2_C0630	COG0281	malic enzyme
AT6N2_C0634	COG4948	Mandelate Racemase Muconate Lactonizing
AT6N2_C0636	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AT6N2_C0637	COG1127	ABC transporter
AT6N2_C0650	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AT6N2_C0650	COG3264	Mechanosensitive ion channel
AT6N2_C0652	COG0745	RESPONSE REGULATOR receiver
AT6N2_C0653	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT6N2_C0655	COG0187	DNA topoisomerase II activity
AT6N2_C0657	COG0149	triose-phosphate isomerase activity
AT6N2_C0660	COG0504	CTP synthase activity
AT6N2_C0661	COG0114	fumarate hydratase activity
AT6N2_C0667	COG0546	phosphoglycolate phosphatase activity
AT6N2_C0668	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AT6N2_C0676	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AT6N2_C0679	COG2003	Belongs to the UPF0758 family
AT6N2_C0681	COG0024	Methionine aminopeptidase
AT6N2_C0682	COG1489	DNA binding
AT6N2_C0683	COG3243	poly(R)-hydroxyalkanoic acid synthase
AT6N2_C0689	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT6N2_C0691	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT6N2_C0692	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AT6N2_C0694	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT6N2_C0695	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT6N2_C0703	COG0436	Aminotransferase
AT6N2_C0707	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AT6N2_C0707	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AT6N2_C0711	COG1126	abc transporter atp-binding protein
AT6N2_C0712	COG0765	amino acid transport
AT6N2_C0713	COG4597	amino acid ABC transporter
AT6N2_C0714	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_C0716	COG0626	cystathionine gamma-synthase activity
AT6N2_C0717	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT6N2_C0720	COG0596	Alpha beta hydrolase
AT6N2_C0723	COG2124	cytochrome p450
AT6N2_C0727	COG1862	Preprotein translocase
AT6N2_C0733	COG0321	lipoyl(octanoyl) transferase activity
AT6N2_C0739	COG0242	peptide deformylase activity
AT6N2_C0741	COG0243	molybdopterin cofactor binding
AT6N2_C0742	COG2239	Acts as a magnesium transporter
AT6N2_C0761	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AT6N2_C0764	COG0667	Aldo Keto reductase
AT6N2_C0767	COG1609	Transcriptional regulator
AT6N2_C0769	COG1121	(ABC) transporter
AT6N2_C0771	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT6N2_C0776	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT6N2_C0778	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AT6N2_C0779	COG0629	single-stranded DNA binding
AT6N2_C0783	COG2095	MarC family integral membrane protein
AT6N2_C0784	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AT6N2_C0796	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AT6N2_C0798	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT6N2_C0799	COG0084	hydrolase, TatD family'
AT6N2_C0800	COG0321	lipoyl(octanoyl) transferase activity
AT6N2_C0800	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AT6N2_C0802	COG2801	Transposase and inactivated derivatives
AT6N2_C0806	COG0450	alkyl hydroperoxide reductase
AT6N2_C0809	COG1671	Belongs to the UPF0178 family
AT6N2_C0813	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AT6N2_C0814	COG0251	oxidation-reduction process
AT6N2_C0818	COG0564	pseudouridine synthase activity
AT6N2_C0819	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AT6N2_C0826	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AT6N2_C0827	COG0509	glycine decarboxylation via glycine cleavage system
AT6N2_C0828	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AT6N2_C0828	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AT6N2_C0837	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT6N2_C0837	COG1648	precorrin-2 dehydrogenase activity
AT6N2_C0839	COG3956	TIGRFAM MazG family protein
AT6N2_C0840	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AT6N2_C0842	COG1923	regulation of RNA biosynthetic process
AT6N2_C0844	COG0569	domain protein
AT6N2_C0845	COG2204	response regulator
AT6N2_C0846	COG5000	phosphorelay sensor kinase activity
AT6N2_C0848	COG2204	response regulator
AT6N2_C0849	COG3852	Histidine kinase
AT6N2_C0851	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AT6N2_C0851	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AT6N2_C0852	COG1058	Belongs to the CinA family
AT6N2_C0852	COG1546	Belongs to the CinA family
AT6N2_C0853	COG2867	negative regulation of translational initiation
AT6N2_C0857	COG0697	spore germination
AT6N2_C0858	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AT6N2_C0862	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT6N2_C0865	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT6N2_C0866	COG0022	dehydrogenase e1 component
AT6N2_C0866	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT6N2_C0867	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AT6N2_C0870	COG0148	phosphopyruvate hydratase activity
AT6N2_C0871	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AT6N2_C0878	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AT6N2_C0882	COG1024	Enoyl-CoA hydratase
AT6N2_C0885	COG1960	acyl-CoA dehydrogenase activity
AT6N2_C0886	COG0683	leucine binding
AT6N2_C0889	COG0410	ABC transporter
AT6N2_C0891	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AT6N2_C0894	COG0372	Belongs to the citrate synthase family
AT6N2_C0896	COG0765	amino acid transport
AT6N2_C0898	COG0765	amino acid transport
AT6N2_C0901	COG2186	Transcriptional regulator
AT6N2_C0903	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT6N2_C0904	COG3494	Protein of unknown function (DUF1009)
AT6N2_C0906	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT6N2_C0907	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AT6N2_C0908	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT6N2_C0910	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT6N2_C0911	COG0750	zinc metalloprotease
AT6N2_C0913	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AT6N2_C0915	COG0233	cytoplasmic translational termination
AT6N2_C0917	COG0528	UMP kinase activity
AT6N2_C0919	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AT6N2_C0922	COG0052	Belongs to the universal ribosomal protein uS2 family
AT6N2_C0928	COG0537	adenosine 5'-monophosphoramidase activity
AT6N2_C0935	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AT6N2_C0942	COG3106	COG3106 Predicted ATPase
AT6N2_C0943	COG3768	UPF0283 membrane protein
AT6N2_C0946	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AT6N2_C0947	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AT6N2_C0948	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AT6N2_C0950	COG0633	Ferredoxin
AT6N2_C0954	COG0384	phenazine biosynthesis protein PhzF
AT6N2_C0955	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AT6N2_C0959	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AT6N2_C0962	COG1530	ribonuclease E activity
AT6N2_C0966	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C0970	COG0436	Aminotransferase
AT6N2_C0972	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AT6N2_C0973	COG0511	ligase activity, forming carbon-carbon bonds
AT6N2_C0976	COG0439	Biotin carboxylase
AT6N2_C0977	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AT6N2_C0981	COG0456	acetyltransferase
AT6N2_C0984	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AT6N2_C0987	COG3811	Belongs to the UPF0386 family
AT6N2_C0988	COG0456	acetyltransferase
AT6N2_C0990	COG0154	amidase activity
AT6N2_C0991	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AT6N2_C0992	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AT6N2_C0993	COG2824	Alkylphosphonate utilization operon protein PhnA
AT6N2_C0995	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AT6N2_C1003	COG0456	acetyltransferase
AT6N2_C1004	COG1960	acyl-CoA dehydrogenase activity
AT6N2_C1005	COG0540	Belongs to the ATCase OTCase family
AT6N2_C1007	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AT6N2_C1008	COG0758	DNA mediated transformation
AT6N2_C1009	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AT6N2_C1011	COG0557	exoribonuclease II activity
AT6N2_C1014	COG0477	Major facilitator Superfamily
AT6N2_C1015	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AT6N2_C1018	COG0784	Response regulator, receiver
AT6N2_C1020	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT6N2_C1024	COG1136	(ABC) transporter
AT6N2_C1027	COG0442	prolyl-tRNA aminoacylation
AT6N2_C1032	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AT6N2_C1032	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AT6N2_C1033	COG1007	ATP synthesis coupled electron transport
AT6N2_C1040	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT6N2_C1041	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AT6N2_C1043	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AT6N2_C1044	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AT6N2_C1047	COG0649	NAD binding
AT6N2_C1049	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT6N2_C1050	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT6N2_C1051	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT6N2_C1058	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AT6N2_C1060	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AT6N2_C1062	COG0740	serine-type endopeptidase activity
AT6N2_C1064	COG2199	diguanylate cyclase activity
AT6N2_C1065	COG2124	cytochrome p450
AT6N2_C1066	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C1070	COG1832	CoA-binding protein
AT6N2_C1074	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AT6N2_C1075	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AT6N2_C1077	COG0010	Belongs to the arginase family
AT6N2_C1078	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AT6N2_C1081	COG1612	heme a metabolic process
AT6N2_C1095	COG1528	Iron-storage protein
AT6N2_C1097	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AT6N2_C1098	COG4139	cobalamin transport
AT6N2_C1102	COG1238	metal cluster binding
AT6N2_C1104	COG3932	Exopolysaccharide synthesis, ExoD
AT6N2_C1108	COG2801	Transposase and inactivated derivatives
AT6N2_C1109	COG2963	transposase activity
AT6N2_C1113	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT6N2_C1115	COG0415	Belongs to the DNA photolyase family
AT6N2_C1118	COG2897	thiosulfate sulfurtransferase activity
AT6N2_C1125	COG0737	Belongs to the 5'-nucleotidase family
AT6N2_C1126	COG0583	DNA-binding transcription factor activity
AT6N2_C1128	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AT6N2_C1129	COG3706	GGDEF domain
AT6N2_C1131	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT6N2_C1132	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AT6N2_C1134	COG0747	negative chemotaxis
AT6N2_C1136	COG0444	Belongs to the ABC transporter superfamily
AT6N2_C1137	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_C1138	COG0601	transmembrane transport
AT6N2_C1146	COG0776	regulation of translation
AT6N2_C1147	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AT6N2_C1149	COG0416	fatty acid biosynthetic process
AT6N2_C1155	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AT6N2_C1156	COG2814	Major facilitator Superfamily
AT6N2_C1157	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AT6N2_C1159	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AT6N2_C1160	COG1280	lysine exporter protein (LysE YggA)
AT6N2_C1161	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT6N2_C1163	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AT6N2_C1163	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AT6N2_C1165	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AT6N2_C1166	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AT6N2_C1171	COG0113	porphobilinogen synthase activity
AT6N2_C1175	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AT6N2_C1177	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AT6N2_C1180	COG0659	secondary active sulfate transmembrane transporter activity
AT6N2_C1182	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AT6N2_C1184	COG0477	Major facilitator Superfamily
AT6N2_C1186	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AT6N2_C1187	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AT6N2_C1190	COG0248	Ppx GppA phosphatase
AT6N2_C1191	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AT6N2_C1193	COG0628	permease
AT6N2_C1194	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AT6N2_C1195	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AT6N2_C1196	COG4571	Outer membrane protease
AT6N2_C1201	COG0243	molybdopterin cofactor binding
AT6N2_C1202	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AT6N2_C1206	COG0625	glutathione transferase activity
AT6N2_C1209	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C1211	COG0322	excinuclease ABC activity
AT6N2_C1212	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AT6N2_C1216	COG0314	molybdopterin synthase activity
AT6N2_C1222	COG0105	UTP biosynthetic process
AT6N2_C1224	COG3706	GGDEF domain
AT6N2_C1225	COG0488	(ABC) transporter
AT6N2_C1229	COG2203	Gaf domain
AT6N2_C1229	COG3706	GGDEF domain
AT6N2_C1229	COG4251	negative regulation of phosphorylation
AT6N2_C1229	COG5001	Diguanylate cyclase
AT6N2_C1233	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AT6N2_C1236	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AT6N2_C1240	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AT6N2_C1241	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AT6N2_C1244	COG0194	GDP metabolic process
AT6N2_C1245	COG1561	YicC-like family, N-terminal region
AT6N2_C1247	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AT6N2_C1248	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT6N2_C1252	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AT6N2_C1253	COG0667	Aldo Keto reductase
AT6N2_C1254	COG0360	Binds together with S18 to 16S ribosomal RNA
AT6N2_C1256	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AT6N2_C1258	COG0359	binds to the 23S rRNA
AT6N2_C1262	COG0305	Participates in initiation and elongation during chromosome replication
AT6N2_C1263	COG5265	(ABC) transporter
AT6N2_C1265	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AT6N2_C1267	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AT6N2_C1271	COG1286	toxin biosynthetic process
AT6N2_C1272	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AT6N2_C1273	COG4221	oxidoreductase activity
AT6N2_C1274	COG0215	cysteine-tRNA ligase activity
AT6N2_C1275	COG2852	Protein conserved in bacteria
AT6N2_C1284	COG5265	(ABC) transporter
AT6N2_C1285	COG0688	phosphatidylethanolamine metabolic process
AT6N2_C1287	COG1183	phosphatidylcholine synthase activity
AT6N2_C1293	COG1742	UPF0060 membrane protein
AT6N2_C1303	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AT6N2_C1305	COG0668	transmembrane transport
AT6N2_C1306	COG3443	Belongs to the bacterial solute-binding protein 9 family
AT6N2_C1307	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_C1310	COG0346	lactoylglutathione lyase activity
AT6N2_C1312	COG1418	mRNA catabolic process
AT6N2_C1314	COG2226	methyltransferase
AT6N2_C1316	COG1381	Involved in DNA repair and RecF pathway recombination
AT6N2_C1317	COG0784	Response regulator, receiver
AT6N2_C1319	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AT6N2_C1321	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AT6N2_C1323	COG0571	ribonuclease III activity
AT6N2_C1324	COG0681	Belongs to the peptidase S26 family
AT6N2_C1326	COG0736	holo-[acyl-carrier-protein] synthase activity
AT6N2_C1331	COG1758	RNA polymerase activity
AT6N2_C1333	COG0840	transmembrane signaling receptor activity
AT6N2_C1335	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AT6N2_C1336	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT6N2_C1337	COG0741	lytic transglycosylase activity
AT6N2_C1346	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AT6N2_C1356	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AT6N2_C1362	COG2814	Major facilitator Superfamily
AT6N2_C1364	COG2239	Acts as a magnesium transporter
AT6N2_C1365	COG1968	undecaprenyl-diphosphatase activity
AT6N2_C1366	COG1733	regulation of RNA biosynthetic process
AT6N2_C1367	COG0604	alcohol dehydrogenase
AT6N2_C1374	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C1375	COG2199	diguanylate cyclase activity
AT6N2_C1376	COG0443	Heat shock 70 kDa protein
AT6N2_C1379	COG0697	spore germination
AT6N2_C1380	COG0308	aminopeptidase N
AT6N2_C1383	COG2202	Pas domain
AT6N2_C1383	COG2205	protein histidine kinase activity
AT6N2_C1384	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AT6N2_C1386	COG2205	protein histidine kinase activity
AT6N2_C1388	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT6N2_C1389	COG3088	subunit of a heme lyase
AT6N2_C1390	COG1138	Cytochrome C-type biogenesis protein
AT6N2_C1391	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AT6N2_C1393	COG4235	cytochrome complex assembly
AT6N2_C1421	COG4695	Portal protein
AT6N2_C1432	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AT6N2_C1433	COG1621	beta-fructofuranosidase activity
AT6N2_C1445	COG2983	Belongs to the UPF0260 family
AT6N2_C1447	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AT6N2_C1457	COG2205	protein histidine kinase activity
AT6N2_C1462	COG2166	iron-sulfur cluster assembly
AT6N2_C1466	COG1320	monovalent cation:proton antiporter activity
AT6N2_C1467	COG2212	antiporter activity
AT6N2_C1468	COG1863	multisubunit Na H antiporter MnhE subunit
AT6N2_C1469	COG0651	ATP synthesis coupled electron transport
AT6N2_C1471	COG1006	Multisubunit Na H antiporter MnhC subunit
AT6N2_C1472	COG2111	Na H antiporter
AT6N2_C1473	COG2111	Na H antiporter
AT6N2_C1473	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AT6N2_C1475	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AT6N2_C1478	COG1272	protein, Hemolysin III
AT6N2_C1480	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AT6N2_C1483	COG2514	catechol 2,3-dioxygenase activity
AT6N2_C1486	COG2169	Transcriptional regulator
AT6N2_C1486	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT6N2_C1488	COG2115	Belongs to the xylose isomerase family
AT6N2_C1490	COG2115	Belongs to the xylose isomerase family
AT6N2_C1491	COG1070	Carbohydrate kinase
AT6N2_C1492	COG1609	Transcriptional regulator
AT6N2_C1495	COG1309	transcriptional regulator
AT6N2_C1498	COG1253	flavin adenine dinucleotide binding
AT6N2_C1500	COG0471	metal ion transport
AT6N2_C1500	COG3273	potassium ion transport
AT6N2_C1502	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AT6N2_C1504	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AT6N2_C1507	COG0803	Belongs to the bacterial solute-binding protein 9 family
AT6N2_C1508	COG1121	(ABC) transporter
AT6N2_C1510	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT6N2_C1511	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT6N2_C1514	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C1515	COG1414	Transcriptional regulator
AT6N2_C1516	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AT6N2_C1520	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT6N2_C1527	COG4176	ABC-type proline glycine betaine transport system permease component
AT6N2_C1529	COG4175	Glycine betaine
AT6N2_C1529	COG0517	IMP dehydrogenase activity
AT6N2_C1535	COG0789	Transcriptional regulator
AT6N2_C1543	COG2010	Cytochrome c
AT6N2_C1545	COG3909	cytochrome
AT6N2_C1548	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AT6N2_C1551	COG0583	DNA-binding transcription factor activity
AT6N2_C1552	COG0840	transmembrane signaling receptor activity
AT6N2_C1553	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AT6N2_C1556	COG4106	trans-aconitate 2-methyltransferase activity
AT6N2_C1558	COG2378	regulation of single-species biofilm formation
AT6N2_C1559	COG0656	L-ascorbic acid biosynthetic process
AT6N2_C1562	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
AT6N2_C1563	COG1733	regulation of RNA biosynthetic process
AT6N2_C1567	COG0433	COG0433 Predicted ATPase
AT6N2_C1571	COG4221	oxidoreductase activity
AT6N2_C1582	COG0488	(ABC) transporter
AT6N2_C1587	COG1764	response to oxidative stress
AT6N2_C1588	COG1846	Transcriptional regulator
AT6N2_C1589	COG1376	ErfK ybiS ycfS ynhG family protein
AT6N2_C1590	COG1376	ErfK ybiS ycfS ynhG family protein
AT6N2_C1593	COG1793	dna ligase
AT6N2_C1593	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AT6N2_C1597	COG0477	Major facilitator Superfamily
AT6N2_C1608	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
AT6N2_C1610	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_C1611	COG1309	transcriptional regulator
AT6N2_C1615	COG2203	Gaf domain
AT6N2_C1615	COG2200	EAL domain
AT6N2_C1615	COG2199	diguanylate cyclase activity
AT6N2_C1620	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AT6N2_C1621	COG4208	sulfate ABC transporter
AT6N2_C1623	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AT6N2_C1624	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AT6N2_C1626	COG1959	2 iron, 2 sulfur cluster binding
AT6N2_C1628	COG0175	sulfate reduction
AT6N2_C1629	COG0175	sulfate reduction
AT6N2_C1630	COG2895	sulfate adenylyltransferase (ATP) activity
AT6N2_C1636	COG0579	oxidoreductase
AT6N2_C1640	COG1823	symporter activity
AT6N2_C1644	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AT6N2_C1644	COG0574	Belongs to the PEP-utilizing enzyme family
AT6N2_C1645	COG2514	catechol 2,3-dioxygenase activity
AT6N2_C1647	COG1196	nuclear chromosome segregation
AT6N2_C1648	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AT6N2_C1650	COG1194	a g-specific adenine glycosylase
AT6N2_C1653	COG2189	Belongs to the N(4) N(6)-methyltransferase family
AT6N2_C1657	COG1802	Transcriptional regulator
AT6N2_C1658	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT6N2_C1662	COG0612	Peptidase, M16
AT6N2_C1663	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AT6N2_C1664	COG5001	Diguanylate cyclase
AT6N2_C1664	COG3300	MHYT domain
AT6N2_C1669	COG1678	Uncharacterized ACR, COG1678
AT6N2_C1672	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AT6N2_C1672	COG0678	peroxiredoxin activity
AT6N2_C1677	COG0328	RNA-DNA hybrid ribonuclease activity
AT6N2_C1679	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AT6N2_C1680	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AT6N2_C1681	COG3346	SURF1 family
AT6N2_C1686	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
AT6N2_C1690	COG0109	protoheme IX farnesyltransferase activity
AT6N2_C1692	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AT6N2_C1697	COG0312	modulator of DNA gyrase
AT6N2_C1699	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT6N2_C1703	COG0259	pyridoxamine-phosphate oxidase activity
AT6N2_C1705	COG0484	heat shock protein binding
AT6N2_C1706	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AT6N2_C1711	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AT6N2_C1713	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AT6N2_C1713	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AT6N2_C1714	COG3214	Protein conserved in bacteria
AT6N2_C1715	COG1122	ATPase activity
AT6N2_C1716	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AT6N2_C1718	COG1268	BioY protein
AT6N2_C1720	COG0123	including yeast histone deacetylase and acetoin utilization protein
AT6N2_C1721	COG1722	exodeoxyribonuclease VII activity
AT6N2_C1723	COG1741	Belongs to the pirin family
AT6N2_C1724	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AT6N2_C1729	COG1522	sequence-specific DNA binding
AT6N2_C1731	COG0840	transmembrane signaling receptor activity
AT6N2_C1733	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AT6N2_C1737	COG1960	acyl-CoA dehydrogenase activity
AT6N2_C1745	COG4638	Rieske (2fe-2S)
AT6N2_C1749	COG0009	L-threonylcarbamoyladenylate synthase
AT6N2_C1754	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AT6N2_C1758	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AT6N2_C1759	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AT6N2_C1763	COG0356	it plays a direct role in the translocation of protons across the membrane
AT6N2_C1767	COG3158	transport of potassium into the cell
AT6N2_C1768	COG0598	Magnesium transport protein CorA
AT6N2_C1772	COG2197	response regulator
AT6N2_C1774	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C1776	COG3734	2-keto-3-deoxy-galactonokinase
AT6N2_C1778	COG0800	Aldolase
AT6N2_C1779	COG3386	PFAM SMP-30 Gluconolaconase
AT6N2_C1780	COG5001	Diguanylate cyclase
AT6N2_C1780	COG3300	MHYT domain
AT6N2_C1782	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AT6N2_C1786	COG1663	tetraacyldisaccharide 4'-kinase activity
AT6N2_C1788	COG1519	Transferase
AT6N2_C1791	COG0483	inositol monophosphate 1-phosphatase activity
AT6N2_C1792	COG0312	modulator of DNA gyrase
AT6N2_C1794	COG1752	Esterase of the alpha-beta hydrolase superfamily
AT6N2_C1795	COG0742	ribosomal rna small subunit methyltransferase
AT6N2_C1796	COG1187	pseudouridine synthase activity
AT6N2_C1797	COG0590	tRNA wobble adenosine to inosine editing
AT6N2_C1800	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AT6N2_C1803	COG0196	riboflavin kinase activity
AT6N2_C1806	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AT6N2_C1807	COG0459	protein refolding
AT6N2_C1808	COG2259	Doxx family
AT6N2_C1809	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AT6N2_C1810	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AT6N2_C1812	COG0124	histidyl-tRNA synthetase
AT6N2_C1819	COG2855	membrane
AT6N2_C1821	COG2818	Glycosylase
AT6N2_C1822	COG1376	ErfK ybiS ycfS ynhG family protein
AT6N2_C1823	COG0247	lactate metabolic process
AT6N2_C1824	COG0277	FAD linked oxidase domain protein
AT6N2_C1825	COG0277	FAD linked oxidase domain protein
AT6N2_C1826	COG0583	DNA-binding transcription factor activity
AT6N2_C1829	COG2186	Transcriptional regulator
AT6N2_C1830	COG0438	transferase activity, transferring glycosyl groups
AT6N2_C1831	COG0561	phosphatase activity
AT6N2_C1833	COG0306	phosphate transporter
AT6N2_C1838	COG0583	DNA-binding transcription factor activity
AT6N2_C1842	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AT6N2_C1845	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AT6N2_C1846	COG2183	response to ionizing radiation
AT6N2_C1847	COG0151	Belongs to the GarS family
AT6N2_C1850	COG0840	transmembrane signaling receptor activity
AT6N2_C1852	COG0751	glycine-tRNA ligase activity
AT6N2_C1854	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AT6N2_C1856	COG1704	LemA family
AT6N2_C1857	COG0752	glycyl-tRNA synthetase alpha subunit
AT6N2_C1866	COG0142	geranyltranstransferase activity
AT6N2_C1868	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AT6N2_C1869	COG0521	Mo-molybdopterin cofactor biosynthetic process
AT6N2_C1873	COG2205	protein histidine kinase activity
AT6N2_C1881	COG0477	Major facilitator Superfamily
AT6N2_C1882	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AT6N2_C1883	COG0248	Ppx GppA phosphatase
AT6N2_C1886	COG0438	transferase activity, transferring glycosyl groups
AT6N2_C1893	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AT6N2_C1894	COG0489	protein tyrosine kinase activity
AT6N2_C1894	COG3206	protein involved in exopolysaccharide biosynthesis
AT6N2_C1899	COG2205	protein histidine kinase activity
AT6N2_C1901	COG1177	transmembrane transport
AT6N2_C1902	COG1176	ABC-type spermidine putrescine transport system, permease component I
AT6N2_C1903	COG3842	ATPase activity
AT6N2_C1907	COG2224	Isocitrate lyase
AT6N2_C1912	COG2081	HI0933 family
AT6N2_C1914	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_C1915	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AT6N2_C1916	COG0363	glucosamine-6-phosphate deaminase activity
AT6N2_C1917	COG0129	dihydroxy-acid dehydratase activity
AT6N2_C1920	COG3842	ATPase activity
AT6N2_C1921	COG0366	Alpha amylase catalytic
AT6N2_C1922	COG0395	ABC-type sugar transport system, permease component
AT6N2_C1923	COG1175	transmembrane transport
AT6N2_C1925	COG1653	transport
AT6N2_C1926	COG1609	Transcriptional regulator
AT6N2_C1927	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AT6N2_C1937	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AT6N2_C1940	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AT6N2_C1941	COG5443	negative regulation of bacterial-type flagellum assembly
AT6N2_C1944	COG4786	Flagellar basal body rod
AT6N2_C1944	COG1256	bacterial-type flagellum assembly
AT6N2_C1945	COG1749	Flagellar hook protein flgE
AT6N2_C1952	COG1360	Flagellar Motor Protein
AT6N2_C1957	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AT6N2_C1958	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AT6N2_C1959	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AT6N2_C1960	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AT6N2_C1961	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AT6N2_C1963	COG4786	Flagellar basal body rod
AT6N2_C1964	COG1157	protein secretion by the type III secretion system
AT6N2_C1967	COG1815	bacterial-type flagellum-dependent cell motility
AT6N2_C1968	COG1558	bacterial-type flagellum-dependent cell motility
AT6N2_C1969	COG1677	Flagellar hook-basal body complex protein FliE
AT6N2_C1970	COG4786	Flagellar basal body rod
AT6N2_C1971	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AT6N2_C1972	COG1706	bacterial-type flagellum-dependent cell motility
AT6N2_C1974	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AT6N2_C1976	COG1338	Plays a role in the flagellum-specific transport system
AT6N2_C1982	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AT6N2_C1985	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AT6N2_C1986	COG5328	Belongs to the UPF0262 family
AT6N2_C1988	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AT6N2_C1989	COG0424	maF-like protein
AT6N2_C1990	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AT6N2_C1992	COG0436	Aminotransferase
AT6N2_C1993	COG1970	mechanosensitive ion channel activity
AT6N2_C1998	COG0840	transmembrane signaling receptor activity
AT6N2_C2001	COG2771	luxR family
AT6N2_C2003	COG1766	The M ring may be actively involved in energy transduction
AT6N2_C2006	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AT6N2_C2007	COG0745	RESPONSE REGULATOR receiver
AT6N2_C2008	COG2201	protein-glutamate methylesterase activity
AT6N2_C2010	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AT6N2_C2011	COG0643	Histidine kinase
AT6N2_C2011	COG2198	Histidine kinase
AT6N2_C2013	COG0745	RESPONSE REGULATOR receiver
AT6N2_C2015	COG0840	transmembrane signaling receptor activity
AT6N2_C2017	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AT6N2_C2017	COG2111	Na H antiporter
AT6N2_C2018	COG0651	ATP synthesis coupled electron transport
AT6N2_C2019	COG1006	Multisubunit Na H antiporter MnhC subunit
AT6N2_C2020	COG1863	multisubunit Na H antiporter MnhE subunit
AT6N2_C2021	COG2212	antiporter activity
AT6N2_C2022	COG1320	monovalent cation:proton antiporter activity
AT6N2_C2043	COG1024	Enoyl-CoA hydratase
AT6N2_C2043	COG1250	3-hydroxyacyl-CoA dehydrogenase
AT6N2_C2044	COG0183	Belongs to the thiolase family
AT6N2_C2045	COG1960	acyl-CoA dehydrogenase activity
AT6N2_C2052	COG1201	RNA secondary structure unwinding
AT6N2_C2053	COG1959	2 iron, 2 sulfur cluster binding
AT6N2_C2057	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AT6N2_C2060	COG0167	dihydroorotate dehydrogenase activity
AT6N2_C2071	COG0717	Belongs to the dCTP deaminase family
AT6N2_C2074	COG2967	ApaG domain
AT6N2_C2076	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AT6N2_C2077	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AT6N2_C2081	COG0745	RESPONSE REGULATOR receiver
AT6N2_C2083	COG0704	Plays a role in the regulation of phosphate uptake
AT6N2_C2085	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AT6N2_C2088	COG0573	inorganic phosphate transmembrane transporter activity
AT6N2_C2090	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AT6N2_C2091	COG5002	protein histidine kinase activity
AT6N2_C2093	COG2326	polyphosphate kinase activity
AT6N2_C2103	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AT6N2_C2113	COG4774	siderophore transport
AT6N2_C2114	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AT6N2_C2116	COG1840	ABC-type Fe3 transport system, periplasmic component
AT6N2_C2117	COG3842	ATPase activity
AT6N2_C2118	COG0318	PFAM AMP-dependent synthetase and ligase
AT6N2_C2119	COG0166	Belongs to the GPI family
AT6N2_C2123	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AT6N2_C2124	COG0418	dihydroorotase activity
AT6N2_C2125	COG3938	Belongs to the proline racemase family
AT6N2_C2127	COG0427	acetyl-CoA hydrolase
AT6N2_C2132	COG0395	ABC-type sugar transport system, permease component
AT6N2_C2133	COG1175	transmembrane transport
AT6N2_C2134	COG3842	ATPase activity
AT6N2_C2138	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AT6N2_C2142	COG0328	RNA-DNA hybrid ribonuclease activity
AT6N2_C2144	COG3617	BRO family, N-terminal domain
AT6N2_C2149	COG0840	transmembrane signaling receptor activity
AT6N2_C2151	COG0594	ribonuclease P activity
AT6N2_C2153	COG0706	membrane insertase activity
AT6N2_C2154	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AT6N2_C2158	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AT6N2_C2163	COG0071	Belongs to the small heat shock protein (HSP20) family
AT6N2_C2167	COG0840	transmembrane signaling receptor activity
AT6N2_C2169	COG2171	N-acyltransferase activity
AT6N2_C2170	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AT6N2_C2173	COG0101	tRNA pseudouridine synthase activity
AT6N2_C2174	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AT6N2_C2175	COG0242	peptide deformylase activity
AT6N2_C2177	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_C2178	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AT6N2_C2180	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AT6N2_C2182	COG1396	sequence-specific DNA binding
AT6N2_C2183	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AT6N2_C2186	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AT6N2_C2187	COG1702	phosphate starvation-inducible protein PhoH
AT6N2_C2189	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AT6N2_C2192	COG0456	acetyltransferase
AT6N2_C2194	COG1214	PFAM Peptidase M22, glycoprotease
AT6N2_C2196	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AT6N2_C2198	COG0180	Tryptophanyl-tRNA synthetase
AT6N2_C2200	COG0728	peptidoglycan biosynthetic process
AT6N2_C2201	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AT6N2_C2202	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AT6N2_C2205	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AT6N2_C2206	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT6N2_C2207	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AT6N2_C2210	COG0776	regulation of translation
AT6N2_C2211	COG0616	signal peptide processing
AT6N2_C2214	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AT6N2_C2215	COG1137	ATPase activity
AT6N2_C2217	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AT6N2_C2219	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT6N2_C2220	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AT6N2_C2221	COG1420	regulation of RNA biosynthetic process
AT6N2_C2222	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AT6N2_C2223	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AT6N2_C2224	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT6N2_C2225	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AT6N2_C2228	COG0268	Binds directly to 16S ribosomal RNA
AT6N2_C2229	COG1024	Enoyl-CoA hydratase
AT6N2_C2230	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AT6N2_C2231	COG2226	methyltransferase
AT6N2_C2232	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AT6N2_C2236	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AT6N2_C2237	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AT6N2_C2238	COG0756	dUTP diphosphatase activity
AT6N2_C2239	COG1280	lysine exporter protein (LysE YggA)
AT6N2_C2240	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AT6N2_C2242	COG0189	ligase activity
AT6N2_C2245	COG3842	ATPase activity
AT6N2_C2247	COG0395	ABC-type sugar transport system, permease component
AT6N2_C2248	COG1175	transmembrane transport
AT6N2_C2252	COG0792	nuclease activity
AT6N2_C2254	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AT6N2_C2258	COG3963	phosphatidate phosphatase activity
AT6N2_C2261	COG0284	orotidine-5'-phosphate decarboxylase activity
AT6N2_C2267	COG1968	undecaprenyl-diphosphatase activity
AT6N2_C2271	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AT6N2_C2273	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AT6N2_C2284	COG0519	Catalyzes the synthesis of GMP from XMP
AT6N2_C2284	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AT6N2_C2286	COG1732	Glycine betaine
AT6N2_C2291	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
AT6N2_C2292	COG1917	Cupin 2, conserved barrel domain protein
AT6N2_C2292	COG2169	Transcriptional regulator
AT6N2_C2296	COG1396	sequence-specific DNA binding
AT6N2_C2299	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT6N2_C2301	COG0481	GTPase activity
AT6N2_C2308	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT6N2_C2309	COG0697	spore germination
AT6N2_C2310	COG3757	hydrolase, family 25
AT6N2_C2311	COG3422	double-strand break repair
AT6N2_C2321	COG4964	Belongs to the GSP D family
AT6N2_C2329	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AT6N2_C2330	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AT6N2_C2333	COG0791	NLP P60 protein
AT6N2_C2338	COG0697	spore germination
AT6N2_C2339	COG0583	DNA-binding transcription factor activity
AT6N2_C2341	COG1840	ABC-type Fe3 transport system, periplasmic component
AT6N2_C2342	COG1959	2 iron, 2 sulfur cluster binding
AT6N2_C2347	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AT6N2_C2349	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AT6N2_C2351	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AT6N2_C2353	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AT6N2_C2354	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT6N2_C2354	COG0072	phenylalanine-tRNA ligase activity
AT6N2_C2355	COG0667	Aldo Keto reductase
AT6N2_C2359	COG4977	sequence-specific DNA binding
AT6N2_C2365	COG1570	exodeoxyribonuclease VII activity
AT6N2_C2366	COG4948	Mandelate Racemase Muconate Lactonizing
AT6N2_C2368	COG1846	Transcriptional regulator
AT6N2_C2369	COG0697	spore germination
AT6N2_C2370	COG2309	aminopeptidase activity
AT6N2_C2372	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AT6N2_C2374	COG1393	Belongs to the ArsC family
AT6N2_C2377	COG3265	gluconokinase activity
AT6N2_C2379	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_C2380	COG0174	glutamine synthetase
AT6N2_C2382	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_C2383	COG4172	Belongs to the ABC transporter superfamily
AT6N2_C2384	COG4239	(ABC) transporter, permease
AT6N2_C2385	COG4174	ABC transporter (Permease)
AT6N2_C2386	COG4166	transmembrane transport
AT6N2_C2387	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
AT6N2_C2389	COG1803	Methylglyoxal synthase
AT6N2_C2391	COG0837	glucose binding
AT6N2_C2393	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AT6N2_C2394	COG2188	Transcriptional regulator
AT6N2_C2395	COG3624	Phosphonate C-P lyase system protein PhnG
AT6N2_C2398	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AT6N2_C2399	COG3626	phosphonate metabolism
AT6N2_C2401	COG3627	carbon phosphorus lyase activity
AT6N2_C2403	COG4107	phosphonate C-P lyase system protein PhnK
AT6N2_C2405	COG4778	phosphonate C-P lyase system protein PhnL
AT6N2_C2407	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AT6N2_C2410	COG3639	organic phosphonate transmembrane transporter activity
AT6N2_C2411	COG3639	organic phosphonate transmembrane transporter activity
AT6N2_C2413	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AT6N2_C2414	COG3454	Phosphonate metabolism
AT6N2_C2415	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AT6N2_C2417	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AT6N2_C2419	COG0848	biopolymer transport protein
AT6N2_C2423	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_C2427	COG2860	membrane
AT6N2_C2429	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AT6N2_C2432	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AT6N2_C2436	COG0477	Major facilitator Superfamily
AT6N2_C2439	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AT6N2_C2441	COG1845	cytochrome c oxidase, subunit III
AT6N2_C2442	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AT6N2_C2445	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AT6N2_C2446	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AT6N2_C2448	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AT6N2_C2450	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AT6N2_C2451	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AT6N2_C2452	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AT6N2_C2453	COG0295	cytidine deaminase activity
AT6N2_C2454	COG1079	Belongs to the binding-protein-dependent transport system permease family
AT6N2_C2455	COG1079	Belongs to the binding-protein-dependent transport system permease family
AT6N2_C2456	COG3845	ABC transporter
AT6N2_C2458	COG1744	ABC transporter substrate-binding protein PnrA-like
AT6N2_C2459	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AT6N2_C2461	COG0443	Heat shock 70 kDa protein
AT6N2_C2462	COG0484	heat shock protein binding
AT6N2_C2465	COG2900	Belongs to the SlyX family
AT6N2_C2473	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AT6N2_C2476	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AT6N2_C2476	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AT6N2_C2479	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AT6N2_C2481	COG1278	Cold shock
AT6N2_C2483	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AT6N2_C2484	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AT6N2_C2486	COG3474	cytochrome
AT6N2_C2488	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AT6N2_C2489	COG0077	Prephenate dehydratase
AT6N2_C2489	COG1605	Chorismate mutase
AT6N2_C2490	COG2816	NAD+ diphosphatase activity
AT6N2_C2492	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AT6N2_C2493	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AT6N2_C2494	COG2258	MOSC domain
AT6N2_C2497	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AT6N2_C2498	COG2951	lytic endotransglycosylase activity
AT6N2_C2502	COG2814	Major facilitator Superfamily
AT6N2_C2503	COG0779	Required for maturation of 30S ribosomal subunits
AT6N2_C2506	COG3064	Membrane
AT6N2_C2506	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AT6N2_C2507	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AT6N2_C2508	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AT6N2_C2509	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AT6N2_C2510	COG1185	polyribonucleotide nucleotidyltransferase activity
AT6N2_C2514	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_C2519	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AT6N2_C2523	COG1780	Probably involved in ribonucleotide reductase function
AT6N2_C2525	COG1072	(Pantothenic acid kinase))
AT6N2_C2542	COG0514	ATP-dependent DNA helicase (RecQ)
AT6N2_C2545	COG1643	Atp-dependent helicase
AT6N2_C2548	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
AT6N2_C2553	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AT6N2_C2555	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AT6N2_C2556	COG0131	Imidazoleglycerol-phosphate dehydratase
AT6N2_C2557	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AT6N2_C2560	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AT6N2_C2561	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AT6N2_C2563	COG0107	imidazoleglycerol-phosphate synthase activity
AT6N2_C2564	COG0140	phosphoribosyl-ATP diphosphatase activity
AT6N2_C2565	COG1072	(Pantothenic acid kinase))
AT6N2_C2568	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AT6N2_C2570	COG0745	RESPONSE REGULATOR receiver
AT6N2_C2572	COG0642	Histidine kinase
AT6N2_C2573	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AT6N2_C2574	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT6N2_C2574	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT6N2_C2575	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT6N2_C2577	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AT6N2_C2578	COG2205	protein histidine kinase activity
AT6N2_C2579	COG3178	'Phosphotransferase
AT6N2_C2580	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AT6N2_C2582	COG1074	ATP-dependent DNA helicase activity
AT6N2_C2587	COG0179	Fumarylacetoacetate (FAA) hydrolase
AT6N2_C2590	COG0135	phosphoribosylanthranilate isomerase activity
AT6N2_C2591	COG0133	tryptophan synthase activity
AT6N2_C2592	COG0159	tryptophan synthase activity
AT6N2_C2594	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AT6N2_C2598	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AT6N2_C2600	COG3030	protein affecting phage T7 exclusion by the F plasmid
AT6N2_C2602	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AT6N2_C2604	COG0237	dephospho-CoA kinase activity
AT6N2_C2605	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AT6N2_C2606	COG0424	maF-like protein
AT6N2_C2607	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AT6N2_C2608	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AT6N2_C2609	COG1981	membrane
AT6N2_C2610	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AT6N2_C2611	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AT6N2_C2612	COG0445	tRNA wobble uridine modification
AT6N2_C2613	COG0357	Ribosomal RNA small subunit methyltransferase G
AT6N2_C2617	COG0501	Belongs to the peptidase M48B family
AT6N2_C2618	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AT6N2_C2618	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AT6N2_C2620	COG0138	bifunctional purine biosynthesis protein purh
AT6N2_C2621	COG2721	sulfolactate sulfo-lyase activity
AT6N2_C2623	COG1129	ABC transporter
AT6N2_C2624	COG4214	carbohydrate transport
AT6N2_C2629	COG1063	alcohol dehydrogenase
AT6N2_C2631	COG3254	rhamnose metabolic process
AT6N2_C2633	COG4948	Mandelate Racemase Muconate Lactonizing
AT6N2_C2636	COG1492	cobalamin metabolic process
AT6N2_C2655	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
AT6N2_C2656	COG1648	precorrin-2 dehydrogenase activity
AT6N2_C2656	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT6N2_C2657	COG1797	cobyrinic acid a,c-diamide synthase activity
AT6N2_C2659	COG1858	cytochrome C peroxidase
AT6N2_C2660	COG0473	3-isopropylmalate dehydrogenase activity
AT6N2_C2662	COG0066	3-isopropylmalate dehydratase activity
AT6N2_C2664	COG2301	Belongs to the HpcH HpaI aldolase family
AT6N2_C2669	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AT6N2_C2670	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AT6N2_C2675	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AT6N2_C2676	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AT6N2_C2677	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AT6N2_C2678	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AT6N2_C2679	COG0799	negative regulation of ribosome biogenesis
AT6N2_C2680	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AT6N2_C2682	COG0793	Belongs to the peptidase S41A family
AT6N2_C2684	COG2861	carbohydrate metabolic process
AT6N2_C2685	COG0494	nUDIX hydrolase
AT6N2_C2688	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C2692	COG2270	Major facilitator Superfamily
AT6N2_C2693	COG2902	Dehydrogenase
AT6N2_C2694	COG1329	Transcriptional regulator
AT6N2_C2696	COG0745	RESPONSE REGULATOR receiver
AT6N2_C2700	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AT6N2_C2701	COG1674	ftsk spoiiie
AT6N2_C2703	COG0004	ammonium transporteR
AT6N2_C2705	COG0347	Belongs to the P(II) protein family
AT6N2_C2706	COG1946	Acyl-CoA thioesterase
AT6N2_C2707	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT6N2_C2711	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AT6N2_C2712	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AT6N2_C2716	COG0495	leucyl-tRNA aminoacylation
AT6N2_C2717	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AT6N2_C2719	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AT6N2_C2720	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AT6N2_C2721	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AT6N2_C2723	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AT6N2_C2725	COG2186	Transcriptional regulator
AT6N2_C2727	COG0277	FAD linked oxidase domain protein
AT6N2_C2728	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_C2730	COG2084	Dehydrogenase
AT6N2_C2731	COG0129	dihydroxy-acid dehydratase activity
AT6N2_C2733	COG0579	oxidoreductase
AT6N2_C2734	COG1473	amidohydrolase
AT6N2_C2735	COG3459	Glycosyltransferase 36 associated
AT6N2_C2736	COG1132	(ABC) transporter
AT6N2_C2737	COG2197	response regulator
AT6N2_C2738	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AT6N2_C2739	COG1349	DNA-binding transcription factor activity
AT6N2_C2740	COG2223	nitrite transmembrane transporter activity
AT6N2_C2741	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AT6N2_C2743	COG2885	chlorophyll binding
AT6N2_C2744	COG0142	geranyltranstransferase activity
AT6N2_C2745	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT6N2_C2748	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AT6N2_C2750	COG0488	(ABC) transporter
AT6N2_C2754	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AT6N2_C2757	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AT6N2_C2760	COG0765	amino acid transport
AT6N2_C2763	COG0335	large ribosomal subunit rRNA binding
AT6N2_C2766	COG0336	Belongs to the RNA methyltransferase TrmD family
AT6N2_C2767	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AT6N2_C2768	COG0228	four-way junction DNA binding
AT6N2_C2769	COG1605	Chorismate mutase
AT6N2_C2769	COG0287	Prephenate dehydrogenase
AT6N2_C2770	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AT6N2_C2772	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AT6N2_C2774	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AT6N2_C2775	COG0552	protein localization to endoplasmic reticulum
AT6N2_C2776	COG2917	probably involved in intracellular septation
AT6N2_C2782	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AT6N2_C2783	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AT6N2_C2784	COG4133	protoheme IX ABC transporter activity
AT6N2_C2785	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AT6N2_C2788	COG0670	Belongs to the BI1 family
AT6N2_C2790	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AT6N2_C2791	COG4181	ATPase activity
AT6N2_C2793	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AT6N2_C2797	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AT6N2_C2799	COG4120	Belongs to the binding-protein-dependent transport system permease family
AT6N2_C2800	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
AT6N2_C2803	COG1280	lysine exporter protein (LysE YggA)
AT6N2_C2806	COG0137	argininosuccinate synthase activity
AT6N2_C2808	COG1846	Transcriptional regulator
AT6N2_C2809	COG0339	signal peptide processing
AT6N2_C2810	COG1217	gtp-binding protein TYPA
AT6N2_C2814	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AT6N2_C2815	COG1872	DUF167
AT6N2_C2818	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AT6N2_C2824	COG0181	hydroxymethylbilane synthase activity
AT6N2_C2825	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AT6N2_C2827	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AT6N2_C2831	COG2264	protein methyltransferase activity
AT6N2_C2841	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AT6N2_C2842	COG0039	L-malate dehydrogenase activity
AT6N2_C2843	COG0045	succinate-CoA ligase (ADP-forming) activity
AT6N2_C2844	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AT6N2_C2848	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT6N2_C2850	COG1280	lysine exporter protein (LysE YggA)
AT6N2_C2857	COG4974	Belongs to the 'phage' integrase family
AT6N2_C2861	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AT6N2_C2862	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AT6N2_C2863	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AT6N2_C2865	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AT6N2_C2866	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AT6N2_C2867	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AT6N2_C2870	COG0835	chemotaxis
AT6N2_C2872	COG0729	surface antigen
AT6N2_C2874	COG0156	8-amino-7-oxononanoate synthase activity
AT6N2_C2876	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AT6N2_C2877	COG0671	phosphoesterase, PA-phosphatase related
AT6N2_C2879	COG1940	carbohydrate kinase activity
AT6N2_C2880	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AT6N2_C2881	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AT6N2_C2882	COG2188	Transcriptional regulator
AT6N2_C2885	COG1175	transmembrane transport
AT6N2_C2886	COG0395	ABC-type sugar transport system, permease component
AT6N2_C2889	COG3842	ATPase activity
AT6N2_C2893	COG1737	Transcriptional regulator
AT6N2_C2894	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C2898	COG3142	Participates in the control of copper homeostasis
AT6N2_C2899	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AT6N2_C2900	COG0438	transferase activity, transferring glycosyl groups
AT6N2_C2902	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_C2903	COG0601	transmembrane transport
AT6N2_C2904	COG4166	transmembrane transport
AT6N2_C2908	COG0438	transferase activity, transferring glycosyl groups
AT6N2_C2916	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AT6N2_C2917	COG1132	(ABC) transporter
AT6N2_C2921	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AT6N2_C2923	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT6N2_C2924	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AT6N2_C2929	COG2022	thiamine diphosphate biosynthetic process
AT6N2_C2933	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AT6N2_C2934	COG4149	molybdate abc transporter
AT6N2_C2935	COG0725	ABC transporter, periplasmic molybdate-binding protein
AT6N2_C2936	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_C2937	COG0583	DNA-binding transcription factor activity
AT6N2_C2940	COG1509	lysine 2,3-aminomutase activity
AT6N2_C2941	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
AT6N2_C2942	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AT6N2_C2944	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT6N2_C2945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT6N2_C2947	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AT6N2_C2959	COG4176	ABC-type proline glycine betaine transport system permease component
AT6N2_C2964	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AT6N2_C2975	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AT6N2_C2976	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C2976	COG3347	Dehydrogenase
AT6N2_C2977	COG3842	ATPase activity
AT6N2_C2978	COG4221	oxidoreductase activity
AT6N2_C2980	COG1653	transport
AT6N2_C2981	COG0395	ABC-type sugar transport system, permease component
AT6N2_C2982	COG1175	transmembrane transport
AT6N2_C2985	COG0371	Dehydrogenase
AT6N2_C2986	COG2390	Transcriptional regulator
AT6N2_C2988	COG1070	Carbohydrate kinase
AT6N2_C2990	COG1175	transmembrane transport
AT6N2_C2991	COG0395	ABC-type sugar transport system, permease component
AT6N2_C2992	COG0673	inositol 2-dehydrogenase activity
AT6N2_C2997	COG1653	transport
AT6N2_C2999	COG1175	transmembrane transport
AT6N2_C3001	COG3842	ATPase activity
AT6N2_C3002	COG3842	ATPase activity
AT6N2_C3011	COG0149	triose-phosphate isomerase activity
AT6N2_C3015	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C3018	COG1137	ATPase activity
AT6N2_C3026	COG1063	alcohol dehydrogenase
AT6N2_C3030	COG3734	2-keto-3-deoxy-galactonokinase
AT6N2_C3031	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT6N2_C3033	COG4948	Mandelate Racemase Muconate Lactonizing
AT6N2_C3035	COG1175	transmembrane transport
AT6N2_C3036	COG0395	ABC-type sugar transport system, permease component
AT6N2_C3037	COG3842	ATPase activity
AT6N2_C3038	COG1090	epimerase
AT6N2_C3039	COG1414	Transcriptional regulator
AT6N2_C3040	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C3044	COG2986	histidine ammonia-lyase
AT6N2_C3049	COG1125	glycine betaine transport
AT6N2_C3049	COG0517	IMP dehydrogenase activity
AT6N2_C3052	COG0395	ABC-type sugar transport system, permease component
AT6N2_C3061	COG0753	catalase activity
AT6N2_C3062	COG3685	Protein conserved in bacteria
AT6N2_C3065	COG4221	oxidoreductase activity
AT6N2_C3070	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AT6N2_C3073	COG0297	glycogen (starch) synthase activity
AT6N2_C3086	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AT6N2_C3092	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AT6N2_C3096	COG0288	reversible hydration of carbon dioxide
AT6N2_C3097	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AT6N2_C3103	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT6N2_C3104	COG0657	acetylesterase activity
AT6N2_C3105	COG0583	DNA-binding transcription factor activity
AT6N2_C3107	COG2814	Major facilitator Superfamily
AT6N2_C3110	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AT6N2_C3113	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AT6N2_C3116	COG0783	Belongs to the Dps family
AT6N2_C3125	COG2205	protein histidine kinase activity
AT6N2_C3132	COG3721	Heme iron utilization protein
AT6N2_C3135	COG4558	Periplasmic binding protein
AT6N2_C3136	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT6N2_C3137	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AT6N2_C3138	COG2832	Protein of unknown function (DUF454)
AT6N2_C3140	COG0346	lactoylglutathione lyase activity
AT6N2_C3141	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AT6N2_C3143	COG0346	lactoylglutathione lyase activity
AT6N2_C3151	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AT6N2_C3153	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AT6N2_C3156	COG0564	pseudouridine synthase activity
AT6N2_C3190	COG0784	Response regulator, receiver
AT6N2_C3190	COG5002	protein histidine kinase activity
AT6N2_C3190	COG2198	Histidine kinase
AT6N2_C3192	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C3195	COG0174	glutamine synthetase
AT6N2_C3201	COG0559	Belongs to the binding-protein-dependent transport system permease family
AT6N2_C3203	COG0411	ABC transporter
AT6N2_C3207	COG0829	nickel cation binding
AT6N2_C3208	COG0831	urea catabolic process
AT6N2_C3212	COG0832	Belongs to the urease beta subunit family
AT6N2_C3214	COG3755	Protein conserved in bacteria
AT6N2_C3216	COG1442	glycosyl transferase family 8
AT6N2_C3217	COG0804	urea catabolic process
AT6N2_C3221	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
AT6N2_C3223	COG0830	nickel cation binding
AT6N2_C3225	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AT6N2_C3234	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_C3235	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_C3237	COG0494	nUDIX hydrolase
AT6N2_C3242	COG1309	transcriptional regulator
AT6N2_C3246	COG2346	COG2346, Truncated hemoglobins
AT6N2_C3247	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT6N2_C3251	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AT6N2_C3255	COG1216	Glycosyl transferase, family 2
AT6N2_C3255	COG1442	glycosyl transferase family 8
AT6N2_C3263	COG4215	(ABC) transporter
AT6N2_C3266	COG0646	methionine synthase
AT6N2_C3266	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AT6N2_C3268	COG0840	transmembrane signaling receptor activity
AT6N2_C3269	COG0840	transmembrane signaling receptor activity
AT6N2_C3276	COG4213	ABC transporter substrate-binding protein
AT6N2_C3279	COG4214	carbohydrate transport
AT6N2_C3282	COG0406	alpha-ribazole phosphatase activity
AT6N2_C3287	COG1305	Transglutaminase-like
AT6N2_C3289	COG2308	Evidence 4 Homologs of previously reported genes of
AT6N2_C3293	COG1376	ErfK ybiS ycfS ynhG family protein
AT6N2_C3294	COG2259	Doxx family
AT6N2_C3296	COG0513	Belongs to the DEAD box helicase family
AT6N2_C3297	COG0784	Response regulator, receiver
AT6N2_C3297	COG2205	protein histidine kinase activity
AT6N2_C3297	COG5002	protein histidine kinase activity
AT6N2_C3298	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_C3298	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AT6N2_C3300	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AT6N2_C3306	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
AT6N2_C3307	COG2351	hydroxyisourate hydrolase activity
AT6N2_C3309	COG1686	Belongs to the peptidase S11 family
AT6N2_C3310	COG1309	transcriptional regulator
AT6N2_C3312	COG1304	FMN binding
AT6N2_C3315	COG0402	S-adenosylhomocysteine deaminase activity
AT6N2_C3319	COG0583	DNA-binding transcription factor activity
AT6N2_C3324	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_C3327	COG0024	Methionine aminopeptidase
AT6N2_C3329	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AT6N2_C3335	COG1160	GTP binding
AT6N2_C3339	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_C3340	COG0366	Alpha amylase catalytic
AT6N2_C3343	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AT6N2_C3345	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AT6N2_C3346	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AT6N2_C3346	COG0512	Glutamine amidotransferase of anthranilate synthase
AT6N2_C3349	COG1629	transport
AT6N2_C3349	COG4771	TonB-dependent receptor
AT6N2_C3351	COG2862	Uncharacterized protein family, UPF0114
AT6N2_C3358	COG1435	thymidine kinase activity
AT6N2_C3362	COG4175	Glycine betaine
AT6N2_C3369	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AT6N2_C3370	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AT6N2_C3373	COG0740	serine-type endopeptidase activity
AT6N2_C3377	COG4944	Protein of unknown function (DUF1109)
AT6N2_C3378	COG3135	benzoate transporter
AT6N2_C3382	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AT6N2_C3386	COG0435	Glutathione S-transferase
AT6N2_C3389	COG0477	Major facilitator Superfamily
AT6N2_C3391	COG0583	DNA-binding transcription factor activity
AT6N2_C3392	COG0454	-acetyltransferase
AT6N2_C3396	COG0714	Associated with various cellular activities
AT6N2_C3401	COG0617	tRNA 3'-terminal CCA addition
AT6N2_C3405	COG0408	coproporphyrinogen oxidase activity
AT6N2_C3410	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AT6N2_C3411	COG1132	(ABC) transporter
AT6N2_C3412	COG1132	(ABC) transporter
AT6N2_C3413	COG3021	interspecies interaction between organisms
AT6N2_C3416	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AT6N2_C3416	COG2857	Cytochrome c1
AT6N2_C3419	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AT6N2_C3424	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AT6N2_C3426	COG0193	aminoacyl-tRNA hydrolase activity
AT6N2_C3430	COG5001	Diguanylate cyclase
AT6N2_C3432	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AT6N2_C3433	COG5001	Diguanylate cyclase
AT6N2_C3433	COG3300	MHYT domain
AT6N2_C3434	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AT6N2_C3435	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_C3436	COG0840	transmembrane signaling receptor activity
AT6N2_C3437	COG0463	Glycosyl transferase, family 2
AT6N2_C3439	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AT6N2_C3443	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AT6N2_C3446	COG1496	oxidoreductase activity
AT6N2_C3448	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AT6N2_C3452	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT6N2_C3453	COG2205	protein histidine kinase activity
AT6N2_C3455	COG0745	RESPONSE REGULATOR receiver
AT6N2_C3456	COG1846	Transcriptional regulator
AT6N2_C3459	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT6N2_C3460	COG1278	Cold shock
AT6N2_C3465	COG2200	EAL domain
AT6N2_C3465	COG2199	diguanylate cyclase activity
AT6N2_C3466	COG0436	Aminotransferase
AT6N2_C3467	COG0387	Pfam Sodium calcium exchanger
AT6N2_C3472	COG1902	pentaerythritol trinitrate reductase activity
AT6N2_C3474	COG0583	DNA-binding transcription factor activity
AT6N2_C3476	COG0492	ferredoxin-NADP+ reductase activity
AT6N2_C3478	COG1522	sequence-specific DNA binding
AT6N2_C3480	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT6N2_C3482	COG1573	uracil-dna glycosylase
AT6N2_C3483	COG3706	GGDEF domain
AT6N2_C3486	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AT6N2_C3487	COG2321	neutral zinc metallopeptidase
AT6N2_C3490	COG0534	Mate efflux family protein
AT6N2_C3492	COG0505	Belongs to the CarA family
AT6N2_C3495	COG0358	DNA primase activity
AT6N2_C3497	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AT6N2_C3501	COG0432	Pfam Uncharacterised protein family UPF0047
AT6N2_C3503	COG2968	Membrane
AT6N2_C3518	COG3842	ATPase activity
AT6N2_C3521	COG1178	ABC-type Fe3 transport system permease component
AT6N2_C3524	COG1737	Transcriptional regulator
AT6N2_C3526	COG0531	amino acid
AT6N2_C3527	COG0174	glutamine synthetase
AT6N2_C3530	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_C3535	COG2814	Major facilitator Superfamily
AT6N2_C3536	COG1376	ErfK ybiS ycfS ynhG family protein
AT6N2_C3541	COG0251	oxidation-reduction process
AT6N2_C3544	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AT6N2_C3545	COG2267	carboxylic ester hydrolase activity
AT6N2_L0006	COG2184	nucleotidyltransferase activity
AT6N2_L0017	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT6N2_L0023	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AT6N2_L0025	COG1451	nucleotide metabolic process
AT6N2_L0026	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AT6N2_L0029	COG3586	endonuclease activity
AT6N2_L0031	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L0036	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0038	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0041	COG1879	ABC-type sugar transport system periplasmic component
AT6N2_L0042	COG1349	DNA-binding transcription factor activity
AT6N2_L0067	COG1794	racemase activity, acting on amino acids and derivatives
AT6N2_L0068	COG2233	PERMEase
AT6N2_L0074	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0075	COG1176	ABC-type spermidine putrescine transport system, permease component I
AT6N2_L0079	COG3842	ATPase activity
AT6N2_L0091	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0092	COG1175	transmembrane transport
AT6N2_L0098	COG1653	transport
AT6N2_L0099	COG1609	Transcriptional regulator
AT6N2_L0101	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AT6N2_L0105	COG3842	ATPase activity
AT6N2_L0106	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0107	COG1175	transmembrane transport
AT6N2_L0109	COG1653	transport
AT6N2_L0110	COG1309	transcriptional regulator
AT6N2_L0111	COG0673	inositol 2-dehydrogenase activity
AT6N2_L0114	COG0673	inositol 2-dehydrogenase activity
AT6N2_L0117	COG1278	Cold shock
AT6N2_L0119	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AT6N2_L0126	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT6N2_L0128	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AT6N2_L0131	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AT6N2_L0132	COG3618	amidohydrolase
AT6N2_L0133	COG4948	Mandelate Racemase Muconate Lactonizing
AT6N2_L0135	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT6N2_L0137	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0138	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
AT6N2_L0139	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_L0140	COG2186	Transcriptional regulator
AT6N2_L0142	COG0006	proline dipeptidase activity
AT6N2_L0152	COG4977	sequence-specific DNA binding
AT6N2_L0154	COG2223	nitrite transmembrane transporter activity
AT6N2_L0155	COG1609	Transcriptional regulator
AT6N2_L0158	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0159	COG1175	transmembrane transport
AT6N2_L0160	COG2182	Extracellular solute-binding protein
AT6N2_L0162	COG0626	cystathionine gamma-synthase activity
AT6N2_L0165	COG0803	Belongs to the bacterial solute-binding protein 9 family
AT6N2_L0167	COG1121	(ABC) transporter
AT6N2_L0168	COG0523	cobalamin synthesis protein
AT6N2_L0170	COG1653	transport
AT6N2_L0171	COG1175	transmembrane transport
AT6N2_L0172	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0174	COG3842	ATPase activity
AT6N2_L0176	COG3047	cAMP biosynthetic process
AT6N2_L0185	COG0583	DNA-binding transcription factor activity
AT6N2_L0186	COG1879	ABC-type sugar transport system periplasmic component
AT6N2_L0187	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0188	COG1129	ABC transporter
AT6N2_L0192	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT6N2_L0193	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT6N2_L0195	COG5002	protein histidine kinase activity
AT6N2_L0195	COG5001	Diguanylate cyclase
AT6N2_L0195	COG3447	MASE1 domain protein
AT6N2_L0196	COG3257	ureidoglycine aminohydrolase activity
AT6N2_L0199	COG5001	Diguanylate cyclase
AT6N2_L0200	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AT6N2_L0202	COG0747	negative chemotaxis
AT6N2_L0203	COG0601	transmembrane transport
AT6N2_L0204	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L0206	COG0444	Belongs to the ABC transporter superfamily
AT6N2_L0207	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L0209	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AT6N2_L0211	COG0129	dihydroxy-acid dehydratase activity
AT6N2_L0212	COG1879	ABC-type sugar transport system periplasmic component
AT6N2_L0213	COG1129	ABC transporter
AT6N2_L0214	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0215	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0216	COG2186	Transcriptional regulator
AT6N2_L0219	COG0587	DNA-directed DNA polymerase activity
AT6N2_L0225	COG0673	inositol 2-dehydrogenase activity
AT6N2_L0227	COG3842	ATPase activity
AT6N2_L0228	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0230	COG1175	transmembrane transport
AT6N2_L0231	COG1653	transport
AT6N2_L0234	COG0673	inositol 2-dehydrogenase activity
AT6N2_L0237	COG5001	Diguanylate cyclase
AT6N2_L0242	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AT6N2_L0243	COG2894	cell division
AT6N2_L0244	COG0850	regulation of cytokinetic process
AT6N2_L0247	COG2186	Transcriptional regulator
AT6N2_L0248	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AT6N2_L0250	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AT6N2_L0251	COG1063	alcohol dehydrogenase
AT6N2_L0252	COG1312	Catalyzes the dehydration of D-mannonate
AT6N2_L0255	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AT6N2_L0256	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AT6N2_L0256	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AT6N2_L0257	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L0260	COG0625	glutathione transferase activity
AT6N2_L0262	COG1921	L-seryl-tRNASec selenium transferase activity
AT6N2_L0265	COG3964	amidohydrolase
AT6N2_L0267	COG0601	transmembrane transport
AT6N2_L0269	COG0747	negative chemotaxis
AT6N2_L0276	COG4989	oxidoreductase activity
AT6N2_L0279	COG2188	Transcriptional regulator
AT6N2_L0281	COG1501	Belongs to the glycosyl hydrolase 31 family
AT6N2_L0284	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_L0285	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT6N2_L0286	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AT6N2_L0287	COG0352	thiamine-phosphate diphosphorylase activity
AT6N2_L0288	COG0351	phosphomethylpyrimidine kinase
AT6N2_L0289	COG1522	sequence-specific DNA binding
AT6N2_L0290	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AT6N2_L0292	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L0295	COG2204	response regulator
AT6N2_L0297	COG4191	Histidine kinase
AT6N2_L0298	COG1301	dicarboxylic acid transport
AT6N2_L0301	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AT6N2_L0302	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0304	COG1473	amidohydrolase
AT6N2_L0308	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L0311	COG2942	2-epimerase
AT6N2_L0319	COG2197	response regulator
AT6N2_L0326	COG3307	-O-antigen
AT6N2_L0327	COG1596	polysaccharide export
AT6N2_L0328	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AT6N2_L0331	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AT6N2_L0332	COG0840	transmembrane signaling receptor activity
AT6N2_L0332	COG2972	Histidine kinase
AT6N2_L0333	COG1376	ErfK ybiS ycfS ynhG family protein
AT6N2_L0335	COG4221	oxidoreductase activity
AT6N2_L0338	COG2094	Belongs to the DNA glycosylase MPG family
AT6N2_L0341	COG1609	Transcriptional regulator
AT6N2_L0342	COG1653	transport
AT6N2_L0347	COG3842	ATPase activity
AT6N2_L0349	COG0673	inositol 2-dehydrogenase activity
AT6N2_L0350	COG4335	DNA alkylation repair
AT6N2_L0351	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AT6N2_L0352	COG4208	sulfate ABC transporter
AT6N2_L0355	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AT6N2_L0362	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AT6N2_L0365	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT6N2_L0367	COG1040	competence protein
AT6N2_L0368	COG2226	methyltransferase
AT6N2_L0372	COG0494	nUDIX hydrolase
AT6N2_L0374	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AT6N2_L0375	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AT6N2_L0376	COG0653	protein targeting
AT6N2_L0377	COG0697	spore germination
AT6N2_L0382	COG0287	Prephenate dehydrogenase
AT6N2_L0383	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AT6N2_L0386	COG2226	methyltransferase
AT6N2_L0387	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT6N2_L0392	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AT6N2_L0402	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AT6N2_L0404	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AT6N2_L0408	COG4974	Belongs to the 'phage' integrase family
AT6N2_L0409	COG0825	malonyl-CoA metabolic process
AT6N2_L0410	COG3034	peptidoglycan biosynthetic process
AT6N2_L0411	COG0425	Belongs to the sulfur carrier protein TusA family
AT6N2_L0411	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AT6N2_L0412	COG0523	cobalamin synthesis protein
AT6N2_L0414	COG1686	Belongs to the peptidase S11 family
AT6N2_L0415	COG1473	amidohydrolase
AT6N2_L0425	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT6N2_L0431	COG4566	intracellular signal transduction
AT6N2_L0434	COG2197	response regulator
AT6N2_L0435	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AT6N2_L0437	COG4310	Domain of unknown function (DUF2172)
AT6N2_L0438	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AT6N2_L0440	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AT6N2_L0441	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AT6N2_L0442	COG2197	response regulator
AT6N2_L0447	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_L0451	COG1271	oxidase subunit
AT6N2_L0452	COG1294	oxidase, subunit
AT6N2_L0457	COG4529	Protein conserved in bacteria
AT6N2_L0463	COG0739	heme binding
AT6N2_L0463	COG0741	lytic transglycosylase activity
AT6N2_L0463	COG1196	nuclear chromosome segregation
AT6N2_L0464	COG0542	response to heat
AT6N2_L0468	COG2890	protein-(glutamine-N5) methyltransferase activity
AT6N2_L0469	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AT6N2_L0471	COG0527	aspartate kinase activity
AT6N2_L0472	COG0513	Belongs to the DEAD box helicase family
AT6N2_L0475	COG0019	diaminopimelate decarboxylase activity
AT6N2_L0479	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT6N2_L0482	COG3920	Histidine kinase
AT6N2_L0484	COG0784	Response regulator, receiver
AT6N2_L0488	COG1522	sequence-specific DNA binding
AT6N2_L0491	COG1116	anion transmembrane transporter activity
AT6N2_L0493	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_L0494	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT6N2_L0497	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L0498	COG0583	DNA-binding transcription factor activity
AT6N2_L0499	COG0435	Glutathione S-transferase
AT6N2_L0502	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AT6N2_L0503	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_L0504	COG0189	ligase activity
AT6N2_L0509	COG0693	protein deglycase activity
AT6N2_L0514	COG1285	pathogenesis
AT6N2_L0515	COG3685	Protein conserved in bacteria
AT6N2_L0516	COG4993	Dehydrogenase
AT6N2_L0518	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0519	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AT6N2_L0523	COG0559	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0528	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L0532	COG0246	Mannitol dehydrogenase
AT6N2_L0533	COG4608	Belongs to the ABC transporter superfamily
AT6N2_L0534	COG0444	Belongs to the ABC transporter superfamily
AT6N2_L0536	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L0537	COG0601	transmembrane transport
AT6N2_L0539	COG0747	negative chemotaxis
AT6N2_L0540	COG0006	proline dipeptidase activity
AT6N2_L0542	COG4221	oxidoreductase activity
AT6N2_L0549	COG0539	negative regulation of cytoplasmic translation
AT6N2_L0550	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AT6N2_L0555	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AT6N2_L0556	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AT6N2_L0563	COG1063	alcohol dehydrogenase
AT6N2_L0564	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0565	COG2084	Dehydrogenase
AT6N2_L0568	COG1522	sequence-specific DNA binding
AT6N2_L0569	COG1794	racemase activity, acting on amino acids and derivatives
AT6N2_L0572	COG0058	SHG alpha-glucan phosphorylase activity
AT6N2_L0573	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AT6N2_L0574	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AT6N2_L0575	COG0297	glycogen (starch) synthase activity
AT6N2_L0576	COG0033	Phosphoglucomutase
AT6N2_L0577	COG1523	belongs to the glycosyl hydrolase 13 family
AT6N2_L0582	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT6N2_L0582	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AT6N2_L0586	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L0588	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AT6N2_L0593	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L0594	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L0604	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L0606	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L0607	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AT6N2_L0608	COG1609	Transcriptional regulator
AT6N2_L0610	COG1846	Transcriptional regulator
AT6N2_L0613	COG0523	cobalamin synthesis protein
AT6N2_L0616	COG2327	Polysaccharide pyruvyl transferase
AT6N2_L0617	COG0463	Glycosyl transferase, family 2
AT6N2_L0618	COG2244	polysaccharide biosynthetic process
AT6N2_L0619	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AT6N2_L0620	COG2273	Hydrolase Family 16
AT6N2_L0621	COG0438	transferase activity, transferring glycosyl groups
AT6N2_L0623	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L0624	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L0626	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L0627	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT6N2_L0629	COG0489	protein tyrosine kinase activity
AT6N2_L0629	COG3206	protein involved in exopolysaccharide biosynthesis
AT6N2_L0631	COG0784	Response regulator, receiver
AT6N2_L0631	COG4191	Histidine kinase
AT6N2_L0633	COG4176	ABC-type proline glycine betaine transport system permease component
AT6N2_L0634	COG3448	diguanylate cyclase activity
AT6N2_L0634	COG4175	Glycine betaine
AT6N2_L0637	COG0564	pseudouridine synthase activity
AT6N2_L0638	COG0500	methyltransferase
AT6N2_L0640	COG2133	pyrroloquinoline quinone binding
AT6N2_L0642	COG2197	response regulator
AT6N2_L0643	COG4585	Histidine kinase
AT6N2_L0644	COG1879	ABC-type sugar transport system periplasmic component
AT6N2_L0645	COG1129	ABC transporter
AT6N2_L0646	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L0648	COG3386	PFAM SMP-30 Gluconolaconase
AT6N2_L0649	COG2137	regulation of response to DNA damage stimulus
AT6N2_L0650	COG3474	cytochrome
AT6N2_L0652	COG1120	ATPase activity
AT6N2_L0653	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT6N2_L0656	COG4774	siderophore transport
AT6N2_L0657	COG0583	DNA-binding transcription factor activity
AT6N2_L0658	COG2194	sulfuric ester hydrolase activity
AT6N2_L0661	COG0477	Major facilitator Superfamily
AT6N2_L0665	COG0673	inositol 2-dehydrogenase activity
AT6N2_L0669	COG0697	spore germination
AT6N2_L0671	COG0010	Belongs to the arginase family
AT6N2_L0674	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AT6N2_L0675	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AT6N2_L0676	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AT6N2_L0678	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
AT6N2_L0687	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0688	COG3842	ATPase activity
AT6N2_L0690	COG1177	transmembrane transport
AT6N2_L0693	COG1063	alcohol dehydrogenase
AT6N2_L0698	COG0477	Major facilitator Superfamily
AT6N2_L0699	COG0583	DNA-binding transcription factor activity
AT6N2_L0705	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AT6N2_L0709	COG0346	lactoylglutathione lyase activity
AT6N2_L0710	COG0583	DNA-binding transcription factor activity
AT6N2_L0718	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_L0722	COG2828	Protein conserved in bacteria
AT6N2_L0723	COG0583	DNA-binding transcription factor activity
AT6N2_L0724	COG1764	response to oxidative stress
AT6N2_L0727	COG1309	transcriptional regulator
AT6N2_L0730	COG0745	RESPONSE REGULATOR receiver
AT6N2_L0731	COG0642	Histidine kinase
AT6N2_L0735	COG1505	serine-type exopeptidase activity
AT6N2_L0737	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0738	COG1733	regulation of RNA biosynthetic process
AT6N2_L0740	COG0596	Alpha beta hydrolase
AT6N2_L0742	COG0583	DNA-binding transcription factor activity
AT6N2_L0748	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT6N2_L0748	COG1017	nitric oxide dioxygenase activity
AT6N2_L0749	COG0625	glutathione transferase activity
AT6N2_L0751	COG0583	DNA-binding transcription factor activity
AT6N2_L0752	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L0753	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0754	COG1959	2 iron, 2 sulfur cluster binding
AT6N2_L0762	COG2423	ornithine cyclodeaminase activity
AT6N2_L0769	COG0747	negative chemotaxis
AT6N2_L0771	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L0772	COG3938	Belongs to the proline racemase family
AT6N2_L0774	COG4176	ABC-type proline glycine betaine transport system permease component
AT6N2_L0775	COG0247	lactate metabolic process
AT6N2_L0775	COG0277	FAD linked oxidase domain protein
AT6N2_L0780	COG2885	chlorophyll binding
AT6N2_L0782	COG3040	lipid binding
AT6N2_L0784	COG0300	oxidoreductase activity
AT6N2_L0787	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT6N2_L0793	COG1609	Transcriptional regulator
AT6N2_L0794	COG0577	efflux transmembrane transporter activity
AT6N2_L0794	COG1136	(ABC) transporter
AT6N2_L0795	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT6N2_L0797	COG0745	RESPONSE REGULATOR receiver
AT6N2_L0800	COG2084	Dehydrogenase
AT6N2_L0802	COG3622	Belongs to the hyi family
AT6N2_L0804	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L0805	COG0601	transmembrane transport
AT6N2_L0807	COG0747	negative chemotaxis
AT6N2_L0808	COG1609	Transcriptional regulator
AT6N2_L0817	COG0431	NADPH-dependent FMN reductase
AT6N2_L0820	COG0798	PFAM Bile acid sodium symporter
AT6N2_L0822	COG0640	Transcriptional regulator
AT6N2_L0828	COG0745	RESPONSE REGULATOR receiver
AT6N2_L0832	COG1538	Outer membrane efflux protein
AT6N2_L0835	COG2274	protein secretion by the type I secretion system
AT6N2_L0836	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT6N2_L0850	COG0583	DNA-binding transcription factor activity
AT6N2_L0858	COG3505	Type IV secretory pathway VirD4
AT6N2_L0859	COG0640	Transcriptional regulator
AT6N2_L0862	COG0776	regulation of translation
AT6N2_L0863	COG4456	Virulence-associated protein
AT6N2_L0866	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
AT6N2_L0867	COG2948	multi-organism process
AT6N2_L0868	COG3504	Conjugal transfer protein
AT6N2_L0869	COG3736	Type IV secretory pathway, component VirB8
AT6N2_L0872	COG3704	protein secretion by the type IV secretion system
AT6N2_L0875	COG3451	type IV secretory pathway VirB4
AT6N2_L0876	COG3702	type iv secretory pathway
AT6N2_L0877	COG3838	Conjugal transfer protein Trbc
AT6N2_L0882	COG5489	Protein of unknown function (DUF736)
AT6N2_L0890	COG2801	Transposase and inactivated derivatives
AT6N2_L0894	COG3608	succinylglutamate desuccinylase aspartoacylase
AT6N2_L0895	COG1126	abc transporter atp-binding protein
AT6N2_L0896	COG0765	amino acid transport
AT6N2_L0897	COG0765	amino acid transport
AT6N2_L0898	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L0899	COG0626	cystathionine gamma-synthase activity
AT6N2_L0900	COG0583	DNA-binding transcription factor activity
AT6N2_L0901	COG0583	DNA-binding transcription factor activity
AT6N2_L0902	COG0656	L-ascorbic acid biosynthetic process
AT6N2_L0904	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0921	COG3436	PFAM IS66 Orf2 family protein
AT6N2_L0922	COG2433	Pfam Transposase IS66
AT6N2_L0925	COG0583	DNA-binding transcription factor activity
AT6N2_L0926	COG1960	acyl-CoA dehydrogenase activity
AT6N2_L0933	COG1902	pentaerythritol trinitrate reductase activity
AT6N2_L0936	COG1609	Transcriptional regulator
AT6N2_L0938	COG1175	transmembrane transport
AT6N2_L0939	COG0395	ABC-type sugar transport system, permease component
AT6N2_L0941	COG3842	ATPase activity
AT6N2_L0946	COG0243	molybdopterin cofactor binding
AT6N2_L0947	COG1335	isochorismatase
AT6N2_L0952	COG0583	DNA-binding transcription factor activity
AT6N2_L0954	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT6N2_L0954	COG1017	nitric oxide dioxygenase activity
AT6N2_L0955	COG0625	glutathione transferase activity
AT6N2_L0957	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT6N2_L0958	COG0625	glutathione transferase activity
AT6N2_L0959	COG4372	Transposase
AT6N2_L0960	COG3436	PFAM IS66 Orf2 family protein
AT6N2_L0969	COG0683	leucine binding
AT6N2_L0973	COG0604	alcohol dehydrogenase
AT6N2_L0973	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0973	COG3321	synthase
AT6N2_L0977	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0978	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0986	COG1275	C4-dicarboxylate transporter malic acid transport protein
AT6N2_L0990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT6N2_L0992	COG0583	DNA-binding transcription factor activity
AT6N2_L0995	COG0604	alcohol dehydrogenase
AT6N2_L0995	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L0995	COG3321	synthase
AT6N2_L0996	COG1733	regulation of RNA biosynthetic process
AT6N2_L0997	COG0583	DNA-binding transcription factor activity
AT6N2_L0998	COG1335	isochorismatase
AT6N2_L1000	COG1741	Belongs to the pirin family
AT6N2_L1008	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT6N2_L1013	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AT6N2_L1015	COG2144	transferase activity, transferring acyl groups
AT6N2_L1016	COG2072	flavoprotein involved in K transport
AT6N2_L1019	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L1020	COG0765	amino acid transport
AT6N2_L1021	COG0765	amino acid transport
AT6N2_L1024	COG4187	Peptidase family M20/M25/M40
AT6N2_L1026	COG0183	Belongs to the thiolase family
AT6N2_L1027	COG0583	DNA-binding transcription factor activity
AT6N2_L1030	COG1024	Enoyl-CoA hydratase
AT6N2_L1033	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT6N2_L1035	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_L1039	COG0840	transmembrane signaling receptor activity
AT6N2_L1049	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L1052	COG0765	amino acid transport
AT6N2_L1053	COG1126	abc transporter atp-binding protein
AT6N2_L1056	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AT6N2_L1062	COG2186	Transcriptional regulator
AT6N2_L1065	COG0601	transmembrane transport
AT6N2_L1066	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L1071	COG4372	Transposase
AT6N2_L1072	COG3436	PFAM IS66 Orf2 family protein
AT6N2_L1073	COG2963	transposase activity
AT6N2_L1075	COG1063	alcohol dehydrogenase
AT6N2_L1076	COG0246	Mannitol dehydrogenase
AT6N2_L1077	COG1312	Catalyzes the dehydration of D-mannonate
AT6N2_L1078	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
AT6N2_L1082	COG1129	ABC transporter
AT6N2_L1083	COG1879	ABC-type sugar transport system periplasmic component
AT6N2_L1084	COG1802	Transcriptional regulator
AT6N2_L1089	COG0436	Aminotransferase
AT6N2_L1090	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AT6N2_L1094	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AT6N2_L1095	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AT6N2_L1097	COG1984	allophanate hydrolase subunit 2
AT6N2_L1101	COG0625	glutathione transferase activity
AT6N2_L1103	COG1959	2 iron, 2 sulfur cluster binding
AT6N2_L1105	COG4221	oxidoreductase activity
AT6N2_L1108	COG4221	oxidoreductase activity
AT6N2_L1110	COG0251	oxidation-reduction process
AT6N2_L1111	COG0596	Alpha beta hydrolase
AT6N2_L1114	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L1115	COG1309	transcriptional regulator
AT6N2_L1118	COG0583	DNA-binding transcription factor activity
AT6N2_L1127	COG0708	Exodeoxyribonuclease III
AT6N2_L1139	COG2226	methyltransferase
AT6N2_L1140	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT6N2_L1151	COG1074	ATP-dependent DNA helicase activity
AT6N2_L1165	COG2831	hemolysin activation secretion protein
AT6N2_L1171	COG1120	ATPase activity
AT6N2_L1173	COG0534	Mate efflux family protein
AT6N2_L1177	COG2072	flavoprotein involved in K transport
AT6N2_L1178	COG3842	ATPase activity
AT6N2_L1179	COG1177	transmembrane transport
AT6N2_L1183	COG0583	DNA-binding transcription factor activity
AT6N2_L1187	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AT6N2_L1188	COG2080	2 iron, 2 sulfur cluster binding
AT6N2_L1190	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AT6N2_L1191	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AT6N2_L1192	COG2068	MobA-Related Protein
AT6N2_L1197	COG2010	Cytochrome c
AT6N2_L1197	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AT6N2_L1202	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L1203	COG1129	ABC transporter
AT6N2_L1205	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L1206	COG3959	Transketolase, thiamine diphosphate binding domain
AT6N2_L1208	COG3958	Transketolase
AT6N2_L1209	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AT6N2_L1210	COG2390	Transcriptional regulator
AT6N2_L1213	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L1214	COG0765	amino acid transport
AT6N2_L1215	COG1126	abc transporter atp-binding protein
AT6N2_L1218	COG1846	Transcriptional regulator
AT6N2_L1219	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L1221	COG0583	DNA-binding transcription factor activity
AT6N2_L1222	COG0471	metal ion transport
AT6N2_L1222	COG3273	potassium ion transport
AT6N2_L1228	COG0784	Response regulator, receiver
AT6N2_L1228	COG4191	Histidine kinase
AT6N2_L1234	COG1414	Transcriptional regulator
AT6N2_L1236	COG1475	DNA binding
AT6N2_L1238	COG1192	Involved in chromosome partitioning
AT6N2_L1245	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AT6N2_L1247	COG2986	histidine ammonia-lyase
AT6N2_L1248	COG1228	amidohydrolase
AT6N2_L1249	COG0402	S-adenosylhomocysteine deaminase activity
AT6N2_L1257	COG0243	molybdopterin cofactor binding
AT6N2_L1259	COG2010	Cytochrome c
AT6N2_L1259	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AT6N2_L1260	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AT6N2_L1261	COG1845	cytochrome c oxidase, subunit III
AT6N2_L1277	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_L1284	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_L1291	COG3842	ATPase activity
AT6N2_L1292	COG1063	alcohol dehydrogenase
AT6N2_L1294	COG0395	ABC-type sugar transport system, permease component
AT6N2_L1295	COG1175	transmembrane transport
AT6N2_L1296	COG1653	transport
AT6N2_L1301	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
AT6N2_L1306	COG0640	Transcriptional regulator
AT6N2_L1312	COG0071	Belongs to the small heat shock protein (HSP20) family
AT6N2_L1316	COG0577	efflux transmembrane transporter activity
AT6N2_L1318	COG0784	Response regulator, receiver
AT6N2_L1318	COG4191	Histidine kinase
AT6N2_L1319	COG0784	Response regulator, receiver
AT6N2_L1320	COG2202	Pas domain
AT6N2_L1320	COG3920	Histidine kinase
AT6N2_L1325	COG0488	(ABC) transporter
AT6N2_L1328	COG2308	Evidence 4 Homologs of previously reported genes of
AT6N2_L1328	COG2307	Protein conserved in bacteria
AT6N2_L1337	COG0583	DNA-binding transcription factor activity
AT6N2_L1344	COG2197	response regulator
AT6N2_L1348	COG0745	RESPONSE REGULATOR receiver
AT6N2_L1349	COG1228	amidohydrolase
AT6N2_L1356	COG3842	ATPase activity
AT6N2_L1358	COG1176	ABC-type spermidine putrescine transport system, permease component I
AT6N2_L1362	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L1363	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L1364	COG0601	transmembrane transport
AT6N2_L1366	COG4166	transmembrane transport
AT6N2_L1371	COG2890	protein-(glutamine-N5) methyltransferase activity
AT6N2_L1373	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AT6N2_L1375	COG0367	asparagine synthase
AT6N2_L1378	COG0366	Alpha amylase catalytic
AT6N2_L1379	COG4770	biotin carboxylase activity
AT6N2_L1380	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AT6N2_L1381	COG4336	lyase activity
AT6N2_L1382	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AT6N2_L1383	COG1914	H( )-stimulated, divalent metal cation uptake system
AT6N2_L1385	COG1802	Transcriptional regulator
AT6N2_L1387	COG3707	response regulator
AT6N2_L1390	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT6N2_L1391	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_L1392	COG1116	anion transmembrane transporter activity
AT6N2_L1393	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT6N2_L1395	COG0243	molybdopterin cofactor binding
AT6N2_L1396	COG1648	precorrin-2 dehydrogenase activity
AT6N2_L1396	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT6N2_L1399	COG3842	ATPase activity
AT6N2_L1402	COG0395	ABC-type sugar transport system, permease component
AT6N2_L1405	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AT6N2_L1408	COG0071	Belongs to the small heat shock protein (HSP20) family
AT6N2_L1415	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT6N2_L1415	COG1902	pentaerythritol trinitrate reductase activity
AT6N2_L1418	COG0745	RESPONSE REGULATOR receiver
AT6N2_L1428	COG1960	acyl-CoA dehydrogenase activity
AT6N2_L1429	COG2159	amidohydrolase
AT6N2_L1438	COG0392	lysyltransferase activity
AT6N2_L1438	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AT6N2_L1443	COG0601	transmembrane transport
AT6N2_L1444	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L1446	COG0444	Belongs to the ABC transporter superfamily
AT6N2_L1447	COG4608	Belongs to the ABC transporter superfamily
AT6N2_L1450	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AT6N2_L1452	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_L1454	COG3842	ATPase activity
AT6N2_L1456	COG0395	ABC-type sugar transport system, permease component
AT6N2_L1457	COG1175	transmembrane transport
AT6N2_L1461	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT6N2_L1464	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L1466	COG1335	isochorismatase
AT6N2_L1468	COG0251	oxidation-reduction process
AT6N2_L1469	COG2267	carboxylic ester hydrolase activity
AT6N2_L1471	COG0778	Nitroreductase
AT6N2_L1472	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT6N2_L1473	COG1309	transcriptional regulator
AT6N2_L1479	COG2186	Transcriptional regulator
AT6N2_L1480	COG1027	Aspartate ammonia-lyase
AT6N2_L1482	COG0252	asparaginase activity
AT6N2_L1483	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AT6N2_L1485	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AT6N2_L1486	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AT6N2_L1488	COG2205	protein histidine kinase activity
AT6N2_L1492	COG0069	glutamate synthase activity
AT6N2_L1492	COG0067	glutamate synthase
AT6N2_L1492	COG0070	glutamate synthase
AT6N2_L1496	COG2205	protein histidine kinase activity
AT6N2_L1499	COG2951	lytic endotransglycosylase activity
AT6N2_L1500	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT6N2_L1509	COG0330	HflC and HflK could
AT6N2_L1510	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AT6N2_L1512	COG0737	Belongs to the 5'-nucleotidase family
AT6N2_L1515	COG5310	Homospermidine synthase
AT6N2_L1517	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AT6N2_L1518	COG1164	Oligoendopeptidase f
AT6N2_L1520	COG3108	Peptidase M15
AT6N2_L1521	COG0469	pyruvate kinase activity
AT6N2_L1525	COG3750	Belongs to the UPF0335 family
AT6N2_L1526	COG0457	Tetratricopeptide repeat
AT6N2_L1529	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AT6N2_L1530	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AT6N2_L1538	COG0483	inositol monophosphate 1-phosphatase activity
AT6N2_L1543	COG1132	(ABC) transporter
AT6N2_L1544	COG0254	rRNA binding
AT6N2_L1550	COG3588	fructose-bisphosphate aldolase
AT6N2_L1551	COG0126	phosphoglycerate kinase activity
AT6N2_L1559	COG1253	flavin adenine dinucleotide binding
AT6N2_L1561	COG1692	metallophosphoesterase
AT6N2_L1564	COG0217	transcriptional regulatory protein
AT6N2_L1565	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L1566	COG0840	transmembrane signaling receptor activity
AT6N2_L1567	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AT6N2_L1568	COG0632	four-way junction helicase activity
AT6N2_L1569	COG2255	four-way junction helicase activity
AT6N2_L1574	COG0494	nUDIX hydrolase
AT6N2_L1578	COG0824	Thioesterase
AT6N2_L1582	COG0823	Involved in the tonB-independent uptake of proteins
AT6N2_L1584	COG2885	chlorophyll binding
AT6N2_L1586	COG0037	tRNA processing
AT6N2_L1587	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AT6N2_L1588	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT6N2_L1593	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AT6N2_L1597	COG0482	sulfurtransferase activity
AT6N2_L1602	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AT6N2_L1603	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AT6N2_L1604	COG1024	Enoyl-CoA hydratase
AT6N2_L1608	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AT6N2_L1609	COG1960	acyl-CoA dehydrogenase activity
AT6N2_L1611	COG1960	acyl-CoA dehydrogenase activity
AT6N2_L1614	COG0022	dehydrogenase e1 component
AT6N2_L1616	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AT6N2_L1617	COG2391	methyltransferase activity
AT6N2_L1619	COG0640	Transcriptional regulator
AT6N2_L1620	COG3453	Protein conserved in bacteria
AT6N2_L1620	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT6N2_L1625	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L1628	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L1629	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT6N2_L1631	COG1959	2 iron, 2 sulfur cluster binding
AT6N2_L1633	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L1634	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT6N2_L1635	COG1473	amidohydrolase
AT6N2_L1637	COG1126	abc transporter atp-binding protein
AT6N2_L1638	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L1642	COG1522	sequence-specific DNA binding
AT6N2_L1644	COG0673	inositol 2-dehydrogenase activity
AT6N2_L1646	COG3718	enzyme involved in inositol metabolism
AT6N2_L1648	COG3962	Belongs to the TPP enzyme family
AT6N2_L1649	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_L1652	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT6N2_L1653	COG0778	Nitroreductase
AT6N2_L1656	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AT6N2_L1657	COG2011	ABC-type metal ion transport system permease component
AT6N2_L1660	COG3300	MHYT domain
AT6N2_L1660	COG5001	Diguanylate cyclase
AT6N2_L1661	COG1054	Belongs to the UPF0176 family
AT6N2_L1663	COG2954	triphosphatase activity
AT6N2_L1664	COG0800	Aldolase
AT6N2_L1669	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AT6N2_L1672	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L1673	COG0473	3-isopropylmalate dehydrogenase activity
AT6N2_L1674	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L1678	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AT6N2_L1680	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AT6N2_L1683	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT6N2_L1684	COG1120	ATPase activity
AT6N2_L1687	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
AT6N2_L1688	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT6N2_L1693	COG0673	inositol 2-dehydrogenase activity
AT6N2_L1694	COG0673	inositol 2-dehydrogenase activity
AT6N2_L1697	COG1175	transmembrane transport
AT6N2_L1698	COG0395	ABC-type sugar transport system, permease component
AT6N2_L1702	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT6N2_L1704	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AT6N2_L1707	COG1129	ABC transporter
AT6N2_L1708	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L1709	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AT6N2_L1710	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
AT6N2_L1713	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AT6N2_L1716	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L1718	COG0280	phosphate acetyltransferase
AT6N2_L1718	COG0281	malic enzyme
AT6N2_L1719	COG0583	DNA-binding transcription factor activity
AT6N2_L1725	COG1175	transmembrane transport
AT6N2_L1726	COG0395	ABC-type sugar transport system, permease component
AT6N2_L1729	COG0673	inositol 2-dehydrogenase activity
AT6N2_L1731	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AT6N2_L1733	COG0720	synthase
AT6N2_L1734	COG0602	queuosine metabolic process
AT6N2_L1738	COG5001	Diguanylate cyclase
AT6N2_L1739	COG2264	protein methyltransferase activity
AT6N2_L1745	COG3254	rhamnose metabolic process
AT6N2_L1748	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L1749	COG1129	ABC transporter
AT6N2_L1752	COG1349	DNA-binding transcription factor activity
AT6N2_L1754	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L1754	COG3347	Dehydrogenase
AT6N2_L1756	COG4952	isomerase
AT6N2_L1758	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AT6N2_L1762	COG2884	Cell division ATP-binding protein ftsE
AT6N2_L1772	COG0165	Argininosuccinate lyase
AT6N2_L1773	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AT6N2_L1774	COG1250	3-hydroxyacyl-CoA dehydrogenase
AT6N2_L1777	COG2086	electron transfer activity
AT6N2_L1780	COG2096	Adenosyltransferase
AT6N2_L1782	COG0300	oxidoreductase activity
AT6N2_L1786	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AT6N2_L1788	COG1396	sequence-specific DNA binding
AT6N2_L1788	COG3800	Transcriptional regulator
AT6N2_L1790	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AT6N2_L1791	COG0625	glutathione transferase activity
AT6N2_L1793	COG4770	biotin carboxylase activity
AT6N2_L1794	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AT6N2_L1794	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AT6N2_L1795	COG0346	lactoylglutathione lyase activity
AT6N2_L1798	COG4213	ABC transporter substrate-binding protein
AT6N2_L1799	COG4214	carbohydrate transport
AT6N2_L1800	COG1129	ABC transporter
AT6N2_L1802	COG1396	sequence-specific DNA binding
AT6N2_L1812	COG2273	Hydrolase Family 16
AT6N2_L1812	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
AT6N2_L1813	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT6N2_L1827	COG2835	tetraacyldisaccharide 4'-kinase activity
AT6N2_L1828	COG2373	Large extracellular alpha-helical protein
AT6N2_L1829	COG4953	penicillin-binding protein 1C
AT6N2_L1835	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AT6N2_L1839	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AT6N2_L1840	COG0784	Response regulator, receiver
AT6N2_L1840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L1840	COG2198	Histidine kinase
AT6N2_L1840	COG2205	protein histidine kinase activity
AT6N2_L1842	COG2204	response regulator
AT6N2_L1846	COG3971	2-oxopent-4-enoate hydratase activity
AT6N2_L1847	COG3485	protocatechuate 3,4-dioxygenase
AT6N2_L1853	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L1856	COG2376	Dihydroxyacetone kinase
AT6N2_L1857	COG1522	sequence-specific DNA binding
AT6N2_L1862	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L1865	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AT6N2_L1865	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT6N2_L1867	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AT6N2_L1871	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L1877	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AT6N2_L1878	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
AT6N2_L1878	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AT6N2_L1881	COG1309	transcriptional regulator
AT6N2_L1882	COG1063	alcohol dehydrogenase
AT6N2_L1885	COG1879	ABC-type sugar transport system periplasmic component
AT6N2_L1887	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L1892	COG0477	Major facilitator Superfamily
AT6N2_L1894	COG5001	Diguanylate cyclase
AT6N2_L1898	COG3842	ATPase activity
AT6N2_L1899	COG0395	ABC-type sugar transport system, permease component
AT6N2_L1900	COG1175	transmembrane transport
AT6N2_L1901	COG1653	transport
AT6N2_L1904	COG0673	inositol 2-dehydrogenase activity
AT6N2_L1905	COG1609	Transcriptional regulator
AT6N2_L1907	COG1960	acyl-CoA dehydrogenase activity
AT6N2_L1908	COG0583	DNA-binding transcription factor activity
AT6N2_L1909	COG1609	Transcriptional regulator
AT6N2_L1911	COG1176	ABC-type spermidine putrescine transport system, permease component I
AT6N2_L1913	COG3842	ATPase activity
AT6N2_L1916	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AT6N2_L1919	COG1473	amidohydrolase
AT6N2_L1926	COG0747	negative chemotaxis
AT6N2_L1927	COG0601	transmembrane transport
AT6N2_L1929	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L1931	COG0444	Belongs to the ABC transporter superfamily
AT6N2_L1932	COG4608	Belongs to the ABC transporter superfamily
AT6N2_L1934	COG0583	DNA-binding transcription factor activity
AT6N2_L1935	COG0747	negative chemotaxis
AT6N2_L1939	COG0154	amidase activity
AT6N2_L1940	COG0693	protein deglycase activity
AT6N2_L1943	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L1944	COG0601	transmembrane transport
AT6N2_L1947	COG1473	amidohydrolase
AT6N2_L1948	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L1954	COG0683	leucine binding
AT6N2_L1957	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L1960	COG0747	negative chemotaxis
AT6N2_L1961	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L1969	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AT6N2_L1970	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AT6N2_L1971	COG1126	abc transporter atp-binding protein
AT6N2_L1974	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L1975	COG0765	amino acid transport
AT6N2_L1976	COG0765	amino acid transport
AT6N2_L1978	COG3485	protocatechuate 3,4-dioxygenase
AT6N2_L1979	COG3485	protocatechuate 3,4-dioxygenase
AT6N2_L1980	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AT6N2_L1982	COG0583	DNA-binding transcription factor activity
AT6N2_L1985	COG1414	Transcriptional regulator
AT6N2_L1988	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AT6N2_L1989	COG0183	Belongs to the thiolase family
AT6N2_L1991	COG1940	carbohydrate kinase activity
AT6N2_L1991	COG1846	Transcriptional regulator
AT6N2_L1993	COG3842	ATPase activity
AT6N2_L1994	COG1177	transmembrane transport
AT6N2_L1998	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AT6N2_L2008	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT6N2_L2012	COG0385	Bile acid
AT6N2_L2014	COG0667	Aldo Keto reductase
AT6N2_L2015	COG0583	DNA-binding transcription factor activity
AT6N2_L2017	COG0179	Fumarylacetoacetate (FAA) hydrolase
AT6N2_L2019	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L2021	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT6N2_L2024	COG1132	(ABC) transporter
AT6N2_L2026	COG2826	transposase and inactivated derivatives, IS30 family
AT6N2_L2029	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AT6N2_L2030	COG3547	Transposase (IS116 IS110 IS902 family)
AT6N2_L2032	COG3436	PFAM IS66 Orf2 family protein
AT6N2_L2033	COG2433	Pfam Transposase IS66
AT6N2_L2034	COG2801	Transposase and inactivated derivatives
AT6N2_L2036	COG0438	transferase activity, transferring glycosyl groups
AT6N2_L2041	COG1215	transferase activity, transferring glycosyl groups
AT6N2_L2042	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT6N2_L2044	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AT6N2_L2045	COG1091	dTDP-4-dehydrorhamnose reductase activity
AT6N2_L2047	COG1088	dTDP-glucose 4,6-dehydratase activity
AT6N2_L2048	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AT6N2_L2060	COG0210	DNA helicase
AT6N2_L2065	COG1609	Transcriptional regulator
AT6N2_L2066	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT6N2_L2066	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AT6N2_L2069	COG0395	ABC-type sugar transport system, permease component
AT6N2_L2070	COG3842	ATPase activity
AT6N2_L2071	COG4608	Belongs to the ABC transporter superfamily
AT6N2_L2072	COG0444	Belongs to the ABC transporter superfamily
AT6N2_L2073	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L2075	COG0601	transmembrane transport
AT6N2_L2076	COG2186	Transcriptional regulator
AT6N2_L2077	COG1312	Catalyzes the dehydration of D-mannonate
AT6N2_L2078	COG0747	negative chemotaxis
AT6N2_L2081	COG5001	Diguanylate cyclase
AT6N2_L2081	COG3300	MHYT domain
AT6N2_L2083	COG1028	Short-chain dehydrogenase reductase Sdr
AT6N2_L2086	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AT6N2_L2088	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AT6N2_L2089	COG0306	phosphate transporter
AT6N2_L2090	COG1392	Phosphate transport regulator
AT6N2_L2095	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AT6N2_L2098	COG2207	Transcriptional regulator
AT6N2_L2099	COG4774	siderophore transport
AT6N2_L2101	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT6N2_L2102	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT6N2_L2103	COG1120	ATPase activity
AT6N2_L2105	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L2109	COG3119	arylsulfatase activity
AT6N2_L2110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT6N2_L2111	COG3842	ATPase activity
AT6N2_L2112	COG0165	Argininosuccinate lyase
AT6N2_L2113	COG0395	ABC-type sugar transport system, permease component
AT6N2_L2114	COG1175	transmembrane transport
AT6N2_L2115	COG2182	Extracellular solute-binding protein
AT6N2_L2117	COG1940	carbohydrate kinase activity
AT6N2_L2122	COG1486	melibiose metabolic process
AT6N2_L2123	COG0747	negative chemotaxis
AT6N2_L2125	COG0601	transmembrane transport
AT6N2_L2126	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L2127	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L2129	COG1486	melibiose metabolic process
AT6N2_L2132	COG0784	Response regulator, receiver
AT6N2_L2133	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AT6N2_L2135	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT6N2_L2136	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AT6N2_L2139	COG0765	amino acid transport
AT6N2_L2142	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT6N2_L2144	COG3938	Belongs to the proline racemase family
AT6N2_L2145	COG1609	Transcriptional regulator
AT6N2_L2150	COG0765	amino acid transport
AT6N2_L2151	COG0765	amino acid transport
AT6N2_L2153	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AT6N2_L2159	COG0402	S-adenosylhomocysteine deaminase activity
AT6N2_L2161	COG0601	transmembrane transport
AT6N2_L2162	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L2164	COG1228	amidohydrolase
AT6N2_L2165	COG0444	Belongs to the ABC transporter superfamily
AT6N2_L2166	COG4608	Belongs to the ABC transporter superfamily
AT6N2_L2167	COG1802	Transcriptional regulator
AT6N2_L2169	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AT6N2_L2174	COG3383	formate dehydrogenase (NAD+) activity
AT6N2_L2176	COG2223	nitrite transmembrane transporter activity
AT6N2_L2186	COG3237	CsbD-like
AT6N2_L2188	COG2197	response regulator
AT6N2_L2189	COG2186	Transcriptional regulator
AT6N2_L2191	COG0747	negative chemotaxis
AT6N2_L2193	COG0601	transmembrane transport
AT6N2_L2194	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L2195	COG0405	Gamma-glutamyltransferase
AT6N2_L2198	COG3237	CsbD-like
AT6N2_L2200	COG3181	Tripartite tricarboxylate transporter family receptor
AT6N2_L2201	COG5265	(ABC) transporter
AT6N2_L2202	COG0488	(ABC) transporter
AT6N2_L2208	COG1049	propionate catabolic process, 2-methylcitrate cycle
AT6N2_L2210	COG0840	transmembrane signaling receptor activity
AT6N2_L2210	COG2972	Histidine kinase
AT6N2_L2211	COG0110	maltose O-acetyltransferase activity
AT6N2_L2212	COG2203	Gaf domain
AT6N2_L2212	COG3706	GGDEF domain
AT6N2_L2212	COG4251	negative regulation of phosphorylation
AT6N2_L2212	COG5001	Diguanylate cyclase
AT6N2_L2216	COG1129	ABC transporter
AT6N2_L2217	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L2218	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT6N2_L2222	COG1082	Xylose isomerase domain protein TIM barrel
AT6N2_L2224	COG1126	abc transporter atp-binding protein
AT6N2_L2225	COG0765	amino acid transport
AT6N2_L2226	COG0765	amino acid transport
AT6N2_L2227	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT6N2_L2229	COG3608	succinylglutamate desuccinylase aspartoacylase
AT6N2_L2230	COG0006	proline dipeptidase activity
AT6N2_L2231	COG2423	ornithine cyclodeaminase activity
AT6N2_L2232	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT6N2_L2233	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT6N2_L2234	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AT6N2_L2235	COG1012	belongs to the aldehyde dehydrogenase family
AT6N2_L2239	COG3046	protein related to deoxyribodipyrimidine photolyase
AT6N2_L2248	COG2140	Oxalate decarboxylase
AT6N2_L2254	COG4566	intracellular signal transduction
AT6N2_L2257	COG0243	molybdopterin cofactor binding
AT6N2_L2258	COG0783	Belongs to the Dps family
AT6N2_L2265	COG0596	Alpha beta hydrolase
AT6N2_L2267	COG1764	response to oxidative stress
AT6N2_L2272	COG0596	Alpha beta hydrolase
AT6N2_L2282	COG1840	ABC-type Fe3 transport system, periplasmic component
AT6N2_L2283	COG1840	ABC-type Fe3 transport system, periplasmic component
AT6N2_L2286	COG3842	ATPase activity
AT6N2_L2287	COG0483	inositol monophosphate 1-phosphatase activity
AT6N2_L2289	COG4178	(ABC) transporter
AT6N2_L2292	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AT6N2_L2296	COG0025	NhaP-type Na H and K H
AT6N2_L2299	COG1120	ATPase activity
AT6N2_L2301	COG4774	siderophore transport
AT6N2_L2307	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT6N2_L2311	COG2130	NADP-dependent
AT6N2_L2312	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AT6N2_L2317	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L2318	COG0601	transmembrane transport
AT6N2_L2319	COG0747	negative chemotaxis
AT6N2_L2321	COG0583	DNA-binding transcription factor activity
AT6N2_L2322	COG1446	asparaginase
AT6N2_L2325	COG0747	negative chemotaxis
AT6N2_L2329	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT6N2_L2330	COG0601	transmembrane transport
AT6N2_L2331	COG2197	response regulator
AT6N2_L2364	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AT6N2_L2368	COG2079	MmgE PrpD family protein
AT6N2_L2371	COG0583	DNA-binding transcription factor activity
AT6N2_L2374	COG0601	transmembrane transport
AT6N2_L2376	COG4172	Belongs to the ABC transporter superfamily
AT6N2_L2379	COG1473	amidohydrolase
AT6N2_L2386	COG0406	alpha-ribazole phosphatase activity
AT6N2_L2393	COG4529	Protein conserved in bacteria
AT6N2_L2412	COG4372	Transposase
AT6N2_L2417	COG0789	Transcriptional regulator