locus-tag class description J8N08_00005 PF00308 Bacterial dnaA protein J8N08_00005 PF08299 Bacterial dnaA protein helix-turn-helix J8N08_00005 PF11638 DnaA N-terminal domain J8N08_00010 PF06969 HemN C-terminal domain J8N08_00010 PF04055 Radical SAM superfamily J8N08_00015 PF01725 Ham1 family J8N08_00020 PF01138 3' exoribonuclease family, domain 1 J8N08_00020 PF03725 3' exoribonuclease family, domain 2 J8N08_00025 PF01628 HrcA protein C terminal domain J8N08_00030 PF01025 GrpE J8N08_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 J8N08_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein J8N08_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus J8N08_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) J8N08_00045 PF04963 Sigma-54 factor, core binding domain J8N08_00045 PF04552 Sigma-54, DNA binding domain J8N08_00050 PF00005 ABC transporter J8N08_00055 PF03968 OstA-like protein J8N08_00065 PF01343 Peptidase family S49 J8N08_00070 PF00216 Bacterial DNA-binding protein J8N08_00080 PF10672 S-adenosylmethionine-dependent methyltransferase J8N08_00080 PF02926 THUMP domain J8N08_00080 PF01170 Putative RNA methylase family UPF0020 J8N08_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding J8N08_00085 PF00588 SpoU rRNA Methylase family J8N08_00090 PF01252 Signal peptidase (SPase) II J8N08_00095 PF00672 HAMP domain J8N08_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_00095 PF00512 His Kinase A (phospho-acceptor) domain J8N08_00095 PF01627 Hpt domain J8N08_00095 PF00072 Response regulator receiver domain J8N08_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8N08_00105 PF00488 MutS domain V J8N08_00105 PF05192 MutS domain III J8N08_00105 PF05190 MutS family domain IV J8N08_00105 PF01624 MutS domain I J8N08_00105 PF05188 MutS domain II J8N08_00110 PF01842 ACT domain J8N08_00110 PF08335 GlnD PII-uridylyltransferase J8N08_00110 PF01966 HD domain J8N08_00110 PF01909 Nucleotidyltransferase domain J8N08_00115 PF03023 Lipid II flippase MurJ J8N08_00125 PF00579 tRNA synthetases class I (W and Y) J8N08_00135 PF01106 NifU-like domain J8N08_00140 PF00814 Glycoprotease family J8N08_00145 PF00814 Glycoprotease family J8N08_00145 PF00583 Acetyltransferase (GNAT) family J8N08_00150 PF01475 Ferric uptake regulator family J8N08_00155 PF01553 Acyltransferase J8N08_00160 PF00919 Uncharacterized protein family UPF0004 J8N08_00160 PF01938 TRAM domain J8N08_00160 PF04055 Radical SAM superfamily J8N08_00165 PF02562 PhoH-like protein J8N08_00170 PF02130 Uncharacterized protein family UPF0054 J8N08_00175 PF00571 CBS domain J8N08_00175 PF03471 Transporter associated domain J8N08_00180 PF00795 Carbon-nitrogen hydrolase J8N08_00185 PF01381 Helix-turn-helix J8N08_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain J8N08_00190 PF02772 S-adenosylmethionine synthetase, central domain J8N08_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain J8N08_00195 PF02390 Putative methyltransferase J8N08_00200 PF00294 pfkB family carbohydrate kinase J8N08_00205 PF02646 RmuC family J8N08_00210 PF01327 Polypeptide deformylase J8N08_00215 PF00551 Formyl transferase J8N08_00215 PF02911 Formyl transferase, C-terminal domain J8N08_00220 PF01416 tRNA pseudouridine synthase J8N08_00230 PF07687 Peptidase dimerisation domain J8N08_00230 PF01546 Peptidase family M20/M25/M40 J8N08_00235 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_00235 PF14602 Hexapeptide repeat of succinyl-transferase J8N08_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal J8N08_00245 PF00672 HAMP domain J8N08_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase J8N08_00255 PF00011 Hsp20/alpha crystallin family J8N08_00280 PF00696 Amino acid kinase family J8N08_00290 PF01926 50S ribosome-binding GTPase J8N08_00295 PF14849 YidC periplasmic domain J8N08_00295 PF02096 60Kd inner membrane protein J8N08_00300 PF00825 Ribonuclease P J8N08_00305 PF00468 Ribosomal protein L34 J8N08_00310 PF00672 HAMP domain J8N08_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_00315 PF00512 His Kinase A (phospho-acceptor) domain J8N08_00325 PF01209 ubiE/COQ5 methyltransferase family J8N08_00330 PF00005 ABC transporter J8N08_00335 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_00340 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_00350 PF00149 Calcineurin-like phosphoesterase J8N08_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain J8N08_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain J8N08_00365 PF05544 Proline racemase J8N08_00370 PF01979 Amidohydrolase family J8N08_00375 PF00156 Phosphoribosyl transferase domain J8N08_00380 PF00294 pfkB family carbohydrate kinase J8N08_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J8N08_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J8N08_00400 PF00342 Phosphoglucose isomerase J8N08_00405 PF00501 AMP-binding enzyme J8N08_00405 PF13193 AMP-binding enzyme C-terminal domain J8N08_00410 PF00005 ABC transporter J8N08_00410 PF08402 TOBE domain J8N08_00420 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_00425 PF07715 TonB-dependent Receptor Plug Domain J8N08_00425 PF00593 TonB dependent receptor J8N08_00445 PF01679 Proteolipid membrane potential modulator J8N08_00465 PF03976 Polyphosphate kinase 2 (PPK2) J8N08_00470 PF16736 Single Cache-like J8N08_00470 PF00989 PAS fold J8N08_00470 PF00512 His Kinase A (phospho-acceptor) domain J8N08_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_00475 PF12849 PBP superfamily domain J8N08_00480 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_00485 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_00490 PF00005 ABC transporter J8N08_00495 PF01895 PhoU domain J8N08_00500 PF00072 Response regulator receiver domain J8N08_00500 PF00486 Transcriptional regulatory protein, C terminal J8N08_00510 PF00202 Aminotransferase class-III J8N08_00515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J8N08_00515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J8N08_00520 PF01430 Hsp33 protein J8N08_00525 PF04379 ApaG domain J8N08_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme J8N08_00535 PF00692 dUTPase J8N08_00545 PF00230 Major intrinsic protein J8N08_00585 PF00196 Bacterial regulatory proteins, luxR family J8N08_00585 PF00072 Response regulator receiver domain J8N08_00595 PF01180 Dihydroorotate dehydrogenase J8N08_00630 PF02082 Transcriptional regulator J8N08_00635 PF00270 DEAD/DEAH box helicase J8N08_00635 PF00271 Helicase conserved C-terminal domain J8N08_00635 PF08494 DEAD/H associated J8N08_00655 PF01925 Sulfite exporter TauE/SafE J8N08_00665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_00665 PF12806 Acetyl-CoA dehydrogenase C-terminal like J8N08_00665 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_00665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_00670 PF00108 Thiolase, N-terminal domain J8N08_00670 PF02803 Thiolase, C-terminal domain J8N08_00675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J8N08_00675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J8N08_00675 PF00378 Enoyl-CoA hydratase/isomerase J8N08_00695 PF03334 Na+/H+ antiporter subunit J8N08_00700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J8N08_00705 PF01899 Na+/H+ ion antiporter subunit J8N08_00710 PF00361 Proton-conducting membrane transporter J8N08_00715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J8N08_00720 PF13244 Domain of unknown function (DUF4040) J8N08_00720 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J8N08_00720 PF00361 Proton-conducting membrane transporter J8N08_00720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J8N08_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_00740 PF00072 Response regulator receiver domain J8N08_00745 PF01584 CheW-like domain J8N08_00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_00745 PF01627 Hpt domain J8N08_00745 PF02895 Signal transducing histidine kinase, homodimeric domain J8N08_00750 PF01739 CheR methyltransferase, SAM binding domain J8N08_00750 PF03705 CheR methyltransferase, all-alpha domain J8N08_00755 PF01339 CheB methylesterase J8N08_00755 PF00072 Response regulator receiver domain J8N08_00760 PF00072 Response regulator receiver domain J8N08_00765 PF03975 CheD chemotactic sensory transduction J8N08_00775 PF01514 Secretory protein of YscJ/FliF family J8N08_00775 PF08345 Flagellar M-ring protein C-terminal J8N08_00780 PF00196 Bacterial regulatory proteins, luxR family J8N08_00780 PF03472 Autoinducer binding domain J8N08_00790 PF00672 HAMP domain J8N08_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_00795 PF00672 HAMP domain J8N08_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_00795 PF01627 Hpt domain J8N08_00795 PF00072 Response regulator receiver domain J8N08_00795 PF00512 His Kinase A (phospho-acceptor) domain J8N08_00800 PF01741 Large-conductance mechanosensitive channel, MscL J8N08_00805 PF00155 Aminotransferase class I and II J8N08_00810 PF01370 NAD dependent epimerase/dehydratase family J8N08_00820 PF03884 DNA gyrase inhibitor YacG J8N08_00825 PF02545 Maf-like protein J8N08_00830 PF01176 Translation initiation factor 1A / IF-1 J8N08_00840 PF06793 Uncharacterised protein family (UPF0262) J8N08_00845 PF00815 Histidinol dehydrogenase J8N08_00855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J8N08_00870 PF00700 Bacterial flagellin C-terminal helical region J8N08_00870 PF00669 Bacterial flagellin N-terminal helical region J8N08_00875 PF00700 Bacterial flagellin C-terminal helical region J8N08_00875 PF00669 Bacterial flagellin N-terminal helical region J8N08_00880 PF00700 Bacterial flagellin C-terminal helical region J8N08_00880 PF00669 Bacterial flagellin N-terminal helical region J8N08_00885 PF00813 FliP family J8N08_00895 PF02107 Flagellar L-ring protein J8N08_00905 PF02119 Flagellar P-ring protein J8N08_00910 PF13144 Chaperone for flagella basal body P-ring formation J8N08_00915 PF00460 Flagella basal body rod protein J8N08_00915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8N08_00920 PF02049 Flagellar hook-basal body complex protein FliE J8N08_00925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8N08_00930 PF00460 Flagella basal body rod protein J8N08_00940 PF18269 T3SS EscN ATPase C-terminal domain J8N08_00940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8N08_00945 PF00460 Flagella basal body rod protein J8N08_00945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8N08_00955 PF01618 MotA/TolQ/ExbB proton channel family J8N08_00960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J8N08_00965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term J8N08_00970 PF14841 FliG middle domain J8N08_00970 PF01706 FliG C-terminal domain J8N08_00970 PF14842 FliG N-terminal domain J8N08_00975 PF01312 FlhB HrpN YscU SpaS Family J8N08_00985 PF00669 Bacterial flagellin N-terminal helical region J8N08_00985 PF00700 Bacterial flagellin C-terminal helical region J8N08_00995 PF00691 OmpA family J8N08_00995 PF13677 Membrane MotB of proton-channel complex MotA/MotB J8N08_01005 PF02120 Flagellar hook-length control protein FliK J8N08_01015 PF00486 Transcriptional regulatory protein, C terminal J8N08_01020 PF07559 Flagellar basal body protein FlaE J8N08_01020 PF00460 Flagella basal body rod protein J8N08_01020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal J8N08_01040 PF07378 Flagellar protein FlbT J8N08_01045 PF03963 Flagellar hook capping protein - N-terminal region J8N08_01050 PF01313 Bacterial export proteins, family 3 J8N08_01055 PF00771 FHIPEP family J8N08_01060 PF01311 Bacterial export proteins, family 1 J8N08_01095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain J8N08_01095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain J8N08_01100 PF00356 Bacterial regulatory proteins, lacI family J8N08_01105 PF01547 Bacterial extracellular solute-binding protein J8N08_01110 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_01115 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_01120 PF00128 Alpha amylase, catalytic domain J8N08_01125 PF00005 ABC transporter J8N08_01125 PF03459 TOBE domain J8N08_01125 PF17912 MalK OB fold domain J8N08_01140 PF00920 Dehydratase family J8N08_01145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase J8N08_01150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J8N08_01150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J8N08_01160 PF01266 FAD dependent oxidoreductase J8N08_01165 PF00120 Glutamine synthetase, catalytic domain J8N08_01190 PF00463 Isocitrate lyase family J8N08_01195 PF01381 Helix-turn-helix J8N08_01195 PF06114 IrrE N-terminal-like domain J8N08_01195 PF09856 Predicted transcriptional regulator (DUF2083) J8N08_01200 PF13416 Bacterial extracellular solute-binding protein J8N08_01205 PF00005 ABC transporter J8N08_01205 PF08402 TOBE domain J8N08_01210 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_01215 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_01225 PF13188 PAS domain J8N08_01225 PF13426 PAS domain J8N08_01225 PF00989 PAS fold J8N08_01225 PF00512 His Kinase A (phospho-acceptor) domain J8N08_01225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_01235 PF02541 Ppx/GppA phosphatase family J8N08_01240 PF01728 FtsJ-like methyltransferase J8N08_01245 PF07690 Major Facilitator Superfamily J8N08_01250 PF00753 Metallo-beta-lactamase superfamily J8N08_01255 PF00571 CBS domain J8N08_01255 PF00478 IMP dehydrogenase / GMP reductase domain J8N08_01265 PF00107 Zinc-binding dehydrogenase J8N08_01265 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_01270 PF01738 Dienelactone hydrolase family J8N08_01275 PF00994 Probable molybdopterin binding domain J8N08_01280 PF00288 GHMP kinases N terminal domain J8N08_01280 PF08544 GHMP kinases C terminal J8N08_01290 PF00348 Polyprenyl synthetase J8N08_01305 PF06965 Na+/H+ antiporter 1 J8N08_01305 PF01343 Peptidase family S49 J8N08_01315 PF02091 Glycyl-tRNA synthetase alpha subunit J8N08_01320 PF04011 LemA family J8N08_01325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) J8N08_01335 PF05746 DALR anticodon binding domain J8N08_01335 PF02092 Glycyl-tRNA synthetase beta subunit J8N08_01350 PF04463 Protein of unknown function (DUF523) J8N08_01355 PF00672 HAMP domain J8N08_01355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_01365 PF02844 Phosphoribosylglycinamide synthetase, N domain J8N08_01365 PF02843 Phosphoribosylglycinamide synthetase, C domain J8N08_01365 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain J8N08_01370 PF09371 Tex-like protein N-terminal domain J8N08_01370 PF00575 S1 RNA binding domain J8N08_01370 PF17674 HHH domain J8N08_01370 PF16921 Tex protein YqgF-like domain J8N08_01385 PF01040 UbiA prenyltransferase family J8N08_01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_01400 PF03466 LysR substrate binding domain J8N08_01410 PF04107 Glutamate-cysteine ligase family 2(GCS2) J8N08_01415 PF04452 RNA methyltransferase J8N08_01420 PF01384 Phosphate transporter family J8N08_01430 PF05116 Sucrose-6F-phosphate phosphohydrolase J8N08_01435 PF13439 Glycosyltransferase Family 4 J8N08_01435 PF00534 Glycosyl transferases group 1 J8N08_01440 PF07729 FCD domain J8N08_01440 PF00392 Bacterial regulatory proteins, gntR family J8N08_01450 PF03466 LysR substrate binding domain J8N08_01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_01455 PF01565 FAD binding domain J8N08_01455 PF02913 FAD linked oxidases, C-terminal domain J8N08_01460 PF01565 FAD binding domain J8N08_01465 PF02754 Cysteine-rich domain J8N08_01465 PF13183 4Fe-4S dicluster domain J8N08_01475 PF17969 L,D-transpeptidase C-terminal domain J8N08_01475 PF03734 L,D-transpeptidase catalytic domain J8N08_01480 PF03352 Methyladenine glycosylase J8N08_01490 PF03601 Conserved hypothetical protein 698 J8N08_01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_01495 PF03466 LysR substrate binding domain J8N08_01515 PF13393 Histidyl-tRNA synthetase J8N08_01515 PF03129 Anticodon binding domain J8N08_01525 PF13393 Histidyl-tRNA synthetase J8N08_01530 PF01634 ATP phosphoribosyltransferase J8N08_01535 PF07681 DoxX J8N08_01545 PF00118 TCP-1/cpn60 chaperonin family J8N08_01550 PF00166 Chaperonin 10 Kd subunit J8N08_01560 PF06574 FAD synthetase J8N08_01560 PF01687 Riboflavin kinase J8N08_01565 PF08264 Anticodon-binding domain of tRNA J8N08_01565 PF00133 tRNA synthetases class I (I, L, M and V) J8N08_01575 PF14437 MafB19-like deaminase J8N08_01580 PF00849 RNA pseudouridylate synthase J8N08_01580 PF01479 S4 domain J8N08_01590 PF01734 Patatin-like phospholipase J8N08_01595 PF00999 Sodium/hydrogen exchanger family J8N08_01595 PF02254 TrkA-N domain J8N08_01600 PF01523 Putative modulator of DNA gyrase J8N08_01615 PF00534 Glycosyl transferases group 1 J8N08_01615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) J8N08_01625 PF02606 Tetraacyldisaccharide-1-P 4'-kinase J8N08_01635 PF08676 MutL C terminal dimerisation domain J8N08_01635 PF01119 DNA mismatch repair protein, C-terminal domain J8N08_01640 PF00072 Response regulator receiver domain J8N08_01640 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_01640 PF00989 PAS fold J8N08_01640 PF01627 Hpt domain J8N08_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_01640 PF00512 His Kinase A (phospho-acceptor) domain J8N08_01645 PF00563 EAL domain J8N08_01645 PF00990 Diguanylate cyclase, GGDEF domain J8N08_01645 PF03707 Bacterial signalling protein N terminal repeat J8N08_01645 PF13188 PAS domain J8N08_01650 PF08450 SMP-30/Gluconolactonase/LRE-like region J8N08_01655 PF01081 KDPG and KHG aldolase J8N08_01660 PF05035 2-keto-3-deoxy-galactonokinase J8N08_01675 PF03472 Autoinducer binding domain J8N08_01675 PF00196 Bacterial regulatory proteins, luxR family J8N08_01685 PF10609 NUBPL iron-transfer P-loop NTPase J8N08_01690 PF01544 CorA-like Mg2+ transporter protein J8N08_01695 PF02705 K+ potassium transporter J8N08_01705 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter J8N08_01710 PF00119 ATP synthase A chain J8N08_01715 PF00137 ATP synthase subunit C J8N08_01720 PF00430 ATP synthase B/B' CF(0) J8N08_01725 PF00430 ATP synthase B/B' CF(0) J8N08_01735 PF01351 Ribonuclease HII J8N08_01750 PF01565 FAD binding domain J8N08_01750 PF02913 FAD linked oxidases, C-terminal domain J8N08_01755 PF01300 Telomere recombination J8N08_01755 PF03481 Putative GTP-binding controlling metal-binding J8N08_01765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) J8N08_01765 PF00355 Rieske [2Fe-2S] domain J8N08_01770 PF00175 Oxidoreductase NAD-binding domain J8N08_01770 PF00111 2Fe-2S iron-sulfur cluster binding domain J8N08_01770 PF00970 Oxidoreductase FAD-binding domain J8N08_01775 PF07886 BA14K-like protein J8N08_01780 PF07886 BA14K-like protein J8N08_01790 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_01790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_01790 PF12806 Acetyl-CoA dehydrogenase C-terminal like J8N08_01790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_01805 PF05958 tRNA (Uracil-5-)-methyltransferase J8N08_01810 PF01728 FtsJ-like methyltransferase J8N08_01810 PF01479 S4 domain J8N08_01815 PF00672 HAMP domain J8N08_01815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_01825 PF01037 Lrp/AsnC ligand binding domain J8N08_01850 PF02780 Transketolase, C-terminal domain J8N08_01850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase J8N08_01850 PF02779 Transketolase, pyrimidine binding domain J8N08_01855 PF02678 Pirin J8N08_01855 PF05726 Pirin C-terminal cupin domain J8N08_01860 PF02609 Exonuclease VII small subunit J8N08_01865 PF00850 Histone deacetylase domain J8N08_01870 PF02632 BioY family J8N08_01875 PF02361 Cobalt transport protein J8N08_01880 PF00005 ABC transporter J8N08_01885 PF06224 Winged helix DNA-binding domain J8N08_01890 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J8N08_01890 PF00925 GTP cyclohydrolase II J8N08_01895 PF01264 Chorismate synthase J8N08_01905 PF00300 Histidine phosphatase superfamily (branch 1) J8N08_01915 PF00684 DnaJ central domain J8N08_01915 PF01556 DnaJ C terminal domain J8N08_01915 PF00226 DnaJ domain J8N08_01925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region J8N08_01925 PF01243 Pyridoxamine 5'-phosphate oxidase J8N08_01940 PF13419 Haloacid dehalogenase-like hydrolase J8N08_01950 PF01523 Putative modulator of DNA gyrase J8N08_01965 PF02790 Cytochrome C oxidase subunit II, transmembrane domain J8N08_01965 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J8N08_01970 PF00115 Cytochrome C and Quinol oxidase polypeptide I J8N08_01975 PF01040 UbiA prenyltransferase family J8N08_01980 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 J8N08_01985 PF00510 Cytochrome c oxidase subunit III J8N08_01995 PF02104 SURF1 family J8N08_02000 PF02401 LytB protein J8N08_02005 PF01636 Phosphotransferase enzyme family J8N08_02010 PF00075 RNase H J8N08_02020 PF08534 Redoxin J8N08_02020 PF00462 Glutaredoxin J8N08_02030 PF02622 Uncharacterized ACR, COG1678 J8N08_02040 PF10005 zinc-ribbon domain J8N08_02040 PF15887 Putative zinc-binding metallo-peptidase J8N08_02045 PF00563 EAL domain J8N08_02045 PF13185 GAF domain J8N08_02045 PF00990 Diguanylate cyclase, GGDEF domain J8N08_02050 PF13302 Acetyltransferase (GNAT) domain J8N08_02055 PF05193 Peptidase M16 inactive domain J8N08_02055 PF00675 Insulinase (Peptidase family M16) J8N08_02060 PF14821 Threonine synthase N terminus J8N08_02060 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_02070 PF13419 Haloacid dehalogenase-like hydrolase J8N08_02090 PF01555 DNA methylase J8N08_02090 PF18755 Restriction Enzyme Adenine Methylase Associated J8N08_02100 PF00633 Helix-hairpin-helix motif J8N08_02100 PF00730 HhH-GPD superfamily base excision DNA repair protein J8N08_02100 PF14815 NUDIX domain J8N08_02110 PF13462 Thioredoxin J8N08_02115 PF02463 RecF/RecN/SMC N terminal domain J8N08_02120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_02125 PF02896 PEP-utilising enzyme, TIM barrel domain J8N08_02125 PF00391 PEP-utilising enzyme, mobile domain J8N08_02125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain J8N08_02140 PF00375 Sodium:dicarboxylate symporter family J8N08_02160 PF06039 Malate:quinone oxidoreductase (Mqo) J8N08_02185 PF00009 Elongation factor Tu GTP binding domain J8N08_02190 PF01507 Phosphoadenosine phosphosulfate reductase family J8N08_02195 PF01507 Phosphoadenosine phosphosulfate reductase family J8N08_02200 PF02082 Transcriptional regulator J8N08_02210 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_02215 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_02220 PF00005 ABC transporter J8N08_02220 PF12857 TOBE-like domain J8N08_02225 PF14765 Polyketide synthase dehydratase J8N08_02225 PF00550 Phosphopantetheine attachment site J8N08_02225 PF00698 Acyl transferase domain J8N08_02225 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_02225 PF08659 KR domain J8N08_02225 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_02225 PF00107 Zinc-binding dehydrogenase J8N08_02225 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_02225 PF16197 Ketoacyl-synthetase C-terminal extension J8N08_02230 PF00989 PAS fold J8N08_02230 PF01590 GAF domain J8N08_02230 PF00563 EAL domain J8N08_02230 PF00990 Diguanylate cyclase, GGDEF domain J8N08_02240 PF13977 BetI-type transcriptional repressor, C-terminal J8N08_02240 PF00440 Bacterial regulatory proteins, tetR family J8N08_02245 PF00171 Aldehyde dehydrogenase family J8N08_02250 PF05199 GMC oxidoreductase J8N08_02250 PF00732 GMC oxidoreductase J8N08_02265 PF00654 Voltage gated chloride channel J8N08_02295 PF07690 Major Facilitator Superfamily J8N08_02305 PF04679 ATP dependent DNA ligase C terminal region J8N08_02305 PF01068 ATP dependent DNA ligase domain J8N08_02305 PF04675 DNA ligase N terminus J8N08_02315 PF00403 Heavy-metal-associated domain J8N08_02320 PF03734 L,D-transpeptidase catalytic domain J8N08_02320 PF17969 L,D-transpeptidase C-terminal domain J8N08_02325 PF03734 L,D-transpeptidase catalytic domain J8N08_02325 PF17969 L,D-transpeptidase C-terminal domain J8N08_02330 PF01047 MarR family J8N08_02335 PF02566 OsmC-like protein J8N08_02350 PF12848 ABC transporter J8N08_02350 PF00005 ABC transporter J8N08_02350 PF16326 ABC transporter C-terminal domain J8N08_02385 PF03466 LysR substrate binding domain J8N08_02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_02390 PF00106 short chain dehydrogenase J8N08_02400 PF05872 Bacterial protein of unknown function (DUF853) J8N08_02410 PF01638 HxlR-like helix-turn-helix J8N08_02415 PF00106 short chain dehydrogenase J8N08_02420 PF12833 Helix-turn-helix domain J8N08_02425 PF01810 LysE type translocator J8N08_02430 PF00248 Aldo/keto reductase family J8N08_02435 PF08279 HTH domain J8N08_02435 PF13280 WYL domain J8N08_02450 PF01063 Amino-transferase class IV J8N08_02455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_02455 PF00672 HAMP domain J8N08_02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_02460 PF03466 LysR substrate binding domain J8N08_02475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain J8N08_02475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain J8N08_02490 PF01810 LysE type translocator J8N08_02495 PF01322 Cytochrome C' J8N08_02500 PF00034 Cytochrome c J8N08_02530 PF09278 MerR, DNA binding J8N08_02530 PF00376 MerR family regulatory protein J8N08_02540 PF02583 Metal-sensitive transcriptional repressor J8N08_02555 PF00571 CBS domain J8N08_02555 PF00005 ABC transporter J8N08_02560 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_02570 PF00326 Prolyl oligopeptidase family J8N08_02570 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain J8N08_02580 PF00701 Dihydrodipicolinate synthetase family J8N08_02590 PF02805 Metal binding domain of Ada J8N08_02590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J8N08_02590 PF12833 Helix-turn-helix domain J8N08_02590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J8N08_02595 PF01594 AI-2E family transporter J8N08_02600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_02620 PF03006 Haemolysin-III related J8N08_02630 PF01810 LysE type translocator J8N08_02635 PF01641 SelR domain J8N08_02640 PF13244 Domain of unknown function (DUF4040) J8N08_02640 PF00361 Proton-conducting membrane transporter J8N08_02640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J8N08_02645 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter J8N08_02650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J8N08_02655 PF00361 Proton-conducting membrane transporter J8N08_02660 PF01899 Na+/H+ ion antiporter subunit J8N08_02665 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) J8N08_02670 PF03334 Na+/H+ antiporter subunit J8N08_02675 PF05443 ROS/MUCR transcriptional regulator protein J8N08_02690 PF02657 Fe-S metabolism associated domain J8N08_02695 PF17264 Family of unknown function (DUF5330) J8N08_02700 PF00512 His Kinase A (phospho-acceptor) domain J8N08_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_02735 PF01546 Peptidase family M20/M25/M40 J8N08_02735 PF07687 Peptidase dimerisation domain J8N08_02740 PF01810 LysE type translocator J8N08_02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_02745 PF03466 LysR substrate binding domain J8N08_02750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_02755 PF00912 Transglycosylase J8N08_02755 PF00905 Penicillin binding protein transpeptidase domain J8N08_02760 PF03692 Putative zinc- or iron-chelating domain J8N08_02765 PF00905 Penicillin binding protein transpeptidase domain J8N08_02775 PF00376 MerR family regulatory protein J8N08_02775 PF09278 MerR, DNA binding J8N08_02795 PF08244 Glycosyl hydrolases family 32 C terminal J8N08_02795 PF00251 Glycosyl hydrolases family 32 N-terminal domain J8N08_02800 PF08447 PAS fold J8N08_02800 PF13426 PAS domain J8N08_02800 PF07536 HWE histidine kinase J8N08_02805 PF02696 Uncharacterized ACR, YdiU/UPF0061 family J8N08_02815 PF01037 Lrp/AsnC ligand binding domain J8N08_02815 PF13404 AsnC-type helix-turn-helix domain J8N08_02855 PF04860 Phage portal protein J8N08_02945 PF00072 Response regulator receiver domain J8N08_02945 PF00486 Transcriptional regulatory protein, C terminal J8N08_02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_02965 PF03100 CcmE J8N08_02970 PF01578 Cytochrome C assembly protein J8N08_02970 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal J8N08_02975 PF03918 Cytochrome C biogenesis protein J8N08_02980 PF13180 PDZ domain J8N08_02985 PF00072 Response regulator receiver domain J8N08_02985 PF00486 Transcriptional regulatory protein, C terminal J8N08_02990 PF00072 Response regulator receiver domain J8N08_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_02990 PF00512 His Kinase A (phospho-acceptor) domain J8N08_02990 PF08448 PAS fold J8N08_02990 PF13426 PAS domain J8N08_02995 PF04134 Protein of unknown function, DUF393 J8N08_03005 PF03710 Glutamate-ammonia ligase adenylyltransferase J8N08_03005 PF08335 GlnD PII-uridylyltransferase J8N08_03010 PF00989 PAS fold J8N08_03010 PF00512 His Kinase A (phospho-acceptor) domain J8N08_03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_03020 PF17432 Domain of unknown function (DUF3458_C) ARM repeats J8N08_03020 PF11940 Domain of unknown function (DUF3458) Ig-like fold J8N08_03020 PF01433 Peptidase family M1 domain J8N08_03040 PF00012 Hsp70 protein J8N08_03045 PF00990 Diguanylate cyclase, GGDEF domain J8N08_03075 PF00107 Zinc-binding dehydrogenase J8N08_03075 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_03080 PF01638 HxlR-like helix-turn-helix J8N08_03085 PF02673 Bacitracin resistance protein BacA J8N08_03090 PF00571 CBS domain J8N08_03090 PF01769 Divalent cation transporter J8N08_03090 PF03448 MgtE intracellular N domain J8N08_03095 PF07690 Major Facilitator Superfamily J8N08_03100 PF00781 Diacylglycerol kinase catalytic domain J8N08_03105 PF00202 Aminotransferase class-III J8N08_03115 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus J8N08_03115 PF01048 Phosphorylase superfamily J8N08_03145 PF00155 Aminotransferase class I and II J8N08_03155 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_03155 PF14759 Reductase C-terminal J8N08_03160 PF03328 HpcH/HpaI aldolase/citrate lyase family J8N08_03180 PF02530 Porin subfamily J8N08_03185 PF02530 Porin subfamily J8N08_03190 PF01464 Transglycosylase SLT domain J8N08_03190 PF14718 Soluble lytic murein transglycosylase L domain J8N08_03195 PF00701 Dihydrodipicolinate synthetase family J8N08_03200 PF01668 SmpB protein J8N08_03205 PF00672 HAMP domain J8N08_03205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_03215 PF01192 RNA polymerase Rpb6 J8N08_03220 PF02824 TGS domain J8N08_03220 PF13291 ACT domain J8N08_03220 PF04607 Region found in RelA / SpoT proteins J8N08_03235 PF01648 4'-phosphopantetheinyl transferase superfamily J8N08_03240 PF10502 Signal peptidase, peptidase S26 J8N08_03245 PF14622 Ribonuclease-III-like J8N08_03245 PF00035 Double-stranded RNA binding motif J8N08_03250 PF01926 50S ribosome-binding GTPase J8N08_03250 PF07650 KH domain J8N08_03255 PF00027 Cyclic nucleotide-binding domain J8N08_03255 PF13545 Crp-like helix-turn-helix domain J8N08_03260 PF00072 Response regulator receiver domain J8N08_03265 PF02565 Recombination protein O C terminal J8N08_03265 PF11967 Recombination protein O N terminal J8N08_03270 PF07690 Major Facilitator Superfamily J8N08_03275 PF08241 Methyltransferase domain J8N08_03285 PF01966 HD domain J8N08_03295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_03305 PF00005 ABC transporter J8N08_03310 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_03315 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment J8N08_03320 PF05552 Conserved TM helix J8N08_03320 PF00924 Mechanosensitive ion channel J8N08_03330 PF01966 HD domain J8N08_03355 PF03099 Biotin/lipoate A/B protein ligase family J8N08_03355 PF00293 NUDIX domain J8N08_03360 PF02694 Uncharacterised BCR, YnfA/UPF0060 family J8N08_03370 PF00990 Diguanylate cyclase, GGDEF domain J8N08_03370 PF00072 Response regulator receiver domain J8N08_03375 PF01066 CDP-alcohol phosphatidyltransferase J8N08_03380 PF02666 Phosphatidylserine decarboxylase J8N08_03385 PF00005 ABC transporter J8N08_03385 PF00664 ABC transporter transmembrane region J8N08_03395 PF03641 Possible lysine decarboxylase J8N08_03400 PF03717 Penicillin-binding Protein dimerisation domain J8N08_03400 PF00905 Penicillin binding protein transpeptidase domain J8N08_03405 PF00892 EamA-like transporter family J8N08_03410 PF00561 alpha/beta hydrolase fold J8N08_03430 PF04480 Protein of unknown function (DUF559) J8N08_03435 PF09190 DALR domain J8N08_03435 PF01406 tRNA synthetases class I (C) catalytic domain J8N08_03440 PF00106 short chain dehydrogenase J8N08_03445 PF13537 Glutamine amidotransferase domain J8N08_03445 PF00156 Phosphoribosyl transferase domain J8N08_03450 PF02674 Colicin V production protein J8N08_03455 PF06745 KaiC J8N08_03455 PF18073 Rubredoxin metal binding domain J8N08_03465 PF01168 Alanine racemase, N-terminal domain J8N08_03465 PF00842 Alanine racemase, C-terminal domain J8N08_03470 PF12833 Helix-turn-helix domain J8N08_03470 PF12852 Cupin J8N08_03475 PF03591 AzlC protein J8N08_03485 PF00772 DnaB-like helicase N terminal domain J8N08_03485 PF03796 DnaB-like helicase C terminal domain J8N08_03495 PF01047 MarR family J8N08_03505 PF13533 Biotin-lipoyl like J8N08_03510 PF03948 Ribosomal protein L9, C-terminal domain J8N08_03510 PF01281 Ribosomal protein L9, N-terminal domain J8N08_03520 PF01084 Ribosomal protein S18 J8N08_03525 PF01250 Ribosomal protein S6 J8N08_03530 PF00248 Aldo/keto reductase family J8N08_03535 PF00698 Acyl transferase domain J8N08_03545 PF00550 Phosphopantetheine attachment site J8N08_03550 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_03550 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_03555 PF02618 YceG-like family J8N08_03560 PF03755 YicC-like family, N-terminal region J8N08_03560 PF08340 Domain of unknown function (DUF1732) J8N08_03565 PF00625 Guanylate kinase J8N08_03575 PF00398 Ribosomal RNA adenine dimethylase J8N08_03580 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J8N08_03590 PF04453 LPS transport system D J8N08_03590 PF03968 OstA-like protein J8N08_03605 PF02789 Cytosol aminopeptidase family, N-terminal domain J8N08_03605 PF00883 Cytosol aminopeptidase family, catalytic domain J8N08_03615 PF00563 EAL domain J8N08_03615 PF00990 Diguanylate cyclase, GGDEF domain J8N08_03615 PF03707 Bacterial signalling protein N terminal repeat J8N08_03620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_03625 PF00563 EAL domain J8N08_03625 PF03707 Bacterial signalling protein N terminal repeat J8N08_03625 PF00990 Diguanylate cyclase, GGDEF domain J8N08_03630 PF12848 ABC transporter J8N08_03630 PF00005 ABC transporter J8N08_03635 PF17158 Membrane-associated sensor, integral membrane domain J8N08_03635 PF00990 Diguanylate cyclase, GGDEF domain J8N08_03640 PF13417 Glutathione S-transferase, N-terminal domain J8N08_03645 PF00334 Nucleoside diphosphate kinase J8N08_03665 PF02391 MoaE protein J8N08_03675 PF01066 CDP-alcohol phosphatidyltransferase J8N08_03680 PF08459 UvrC Helix-hairpin-helix N-terminal J8N08_03680 PF02151 UvrB/uvrC motif J8N08_03680 PF01541 GIY-YIG catalytic domain J8N08_03690 PF13505 Outer membrane protein beta-barrel domain J8N08_03695 PF00043 Glutathione S-transferase, C-terminal domain J8N08_03695 PF13417 Glutathione S-transferase, N-terminal domain J8N08_03700 PF00445 Ribonuclease T2 family J8N08_03710 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ J8N08_03715 PF00384 Molybdopterin oxidoreductase J8N08_03715 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J8N08_03715 PF01568 Molydopterin dinucleotide binding domain J8N08_03720 PF00293 NUDIX domain J8N08_03730 PF00551 Formyl transferase J8N08_03735 PF00586 AIR synthase related protein, N-terminal domain J8N08_03735 PF02769 AIR synthase related protein, C-terminal domain J8N08_03740 PF01594 AI-2E family transporter J8N08_03750 PF13089 Polyphosphate kinase N-terminal domain J8N08_03750 PF13090 Polyphosphate kinase C-terminal domain 2 J8N08_03750 PF17941 Polyphosphate kinase C-terminal domain 1 J8N08_03750 PF02503 Polyphosphate kinase middle domain J8N08_03755 PF02541 Ppx/GppA phosphatase family J8N08_03760 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_03780 PF00211 Adenylate and Guanylate cyclase catalytic domain J8N08_03790 PF00570 HRDC domain J8N08_03790 PF01612 3'-5' exonuclease J8N08_03795 PF07690 Major Facilitator Superfamily J8N08_03800 PF02938 GAD domain J8N08_03800 PF00152 tRNA synthetases class II (D, K and N) J8N08_03800 PF01336 OB-fold nucleic acid binding domain J8N08_03805 PF06123 Inner membrane protein CreD J8N08_03810 PF01740 STAS domain J8N08_03810 PF00916 Sulfate permease family J8N08_03820 PF03989 DNA gyrase C-terminal domain, beta-propeller J8N08_03820 PF00521 DNA gyrase/topoisomerase IV, subunit A J8N08_03830 PF04377 Arginine-tRNA-protein transferase, C terminus J8N08_03830 PF04376 Arginine-tRNA-protein transferase, N terminus J8N08_03840 PF00490 Delta-aminolevulinic acid dehydratase J8N08_03860 PF00464 Serine hydroxymethyltransferase J8N08_03865 PF03477 ATP cone domain J8N08_03870 PF01872 RibD C-terminal domain J8N08_03870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J8N08_03875 PF00677 Lumazine binding domain J8N08_03880 PF01810 LysE type translocator J8N08_03885 PF00885 6,7-dimethyl-8-ribityllumazine synthase J8N08_03890 PF01029 NusB family J8N08_03895 PF07690 Major Facilitator Superfamily J8N08_03900 PF03030 Inorganic H+ pyrophosphatase J8N08_03920 PF02504 Fatty acid synthesis protein J8N08_03925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J8N08_03925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J8N08_03930 PF00216 Bacterial DNA-binding protein J8N08_03935 PF13411 MerR HTH family regulatory protein J8N08_03950 PF00403 Heavy-metal-associated domain J8N08_03955 PF00175 Oxidoreductase NAD-binding domain J8N08_03955 PF00111 2Fe-2S iron-sulfur cluster binding domain J8N08_03955 PF00970 Oxidoreductase FAD-binding domain J8N08_03960 PF09278 MerR, DNA binding J8N08_03960 PF00376 MerR family regulatory protein J8N08_03965 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_03970 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_03970 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_03975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_03975 PF00005 ABC transporter J8N08_03980 PF00005 ABC transporter J8N08_03980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_03985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_03995 PF02386 Cation transport protein J8N08_04000 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_04000 PF00585 C-terminal regulatory domain of Threonine dehydratase J8N08_04010 PF00990 Diguanylate cyclase, GGDEF domain J8N08_04010 PF00072 Response regulator receiver domain J8N08_04015 PF02525 Flavodoxin-like fold J8N08_04020 PF03466 LysR substrate binding domain J8N08_04020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_04030 PF00149 Calcineurin-like phosphoesterase J8N08_04030 PF02872 5'-nucleotidase, C-terminal domain J8N08_04055 PF00581 Rhodanese-like domain J8N08_04060 PF01411 tRNA synthetases class II (A) J8N08_04060 PF02272 DHHA1 domain J8N08_04060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J8N08_04065 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_04065 PF00571 CBS domain J8N08_04070 PF03441 FAD binding domain of DNA photolyase J8N08_04070 PF00875 DNA photolyase J8N08_04080 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J8N08_04080 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J8N08_04120 PF06055 Exopolysaccharide synthesis, ExoD J8N08_04125 PF09335 SNARE associated Golgi protein J8N08_04140 PF01032 FecCD transport family J8N08_04145 PF00005 ABC transporter J8N08_04150 PF00127 Copper binding proteins, plastocyanin/azurin family J8N08_04155 PF00210 Ferritin-like domain J8N08_04195 PF02397 Bacterial sugar transferase J8N08_04200 PF00534 Glycosyl transferases group 1 J8N08_04225 PF02628 Cytochrome oxidase assembly protein J8N08_04230 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase J8N08_04235 PF01118 Semialdehyde dehydrogenase, NAD binding domain J8N08_04240 PF00491 Arginase family J8N08_04245 PF00380 Ribosomal protein S9/S16 J8N08_04250 PF00572 Ribosomal protein L13 J8N08_04260 PF13380 CoA binding domain J8N08_04265 PF01053 Cys/Met metabolism PLP-dependent enzyme J8N08_04275 PF00067 Cytochrome P450 J8N08_04280 PF00990 Diguanylate cyclase, GGDEF domain J8N08_04285 PF00574 Clp protease J8N08_04290 PF07724 AAA domain (Cdc48 subfamily) J8N08_04290 PF10431 C-terminal, D2-small domain, of ClpB protein J8N08_04290 PF06689 ClpX C4-type zinc finger J8N08_04295 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_04295 PF05362 Lon protease (S16) C-terminal proteolytic domain J8N08_04295 PF02190 ATP-dependent protease La (LON) substrate-binding domain J8N08_04300 PF00216 Bacterial DNA-binding protein J8N08_04305 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J8N08_04330 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 J8N08_04335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit J8N08_04340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit J8N08_04350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit J8N08_04365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J8N08_04365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J8N08_04365 PF10531 SLBB domain J8N08_04370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J8N08_04370 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal J8N08_04370 PF00384 Molybdopterin oxidoreductase J8N08_04375 PF00146 NADH dehydrogenase J8N08_04380 PF12838 4Fe-4S dicluster domain J8N08_04385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 J8N08_04390 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L J8N08_04395 PF00361 Proton-conducting membrane transporter J8N08_04395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus J8N08_04400 PF00361 Proton-conducting membrane transporter J8N08_04400 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus J8N08_04405 PF00361 Proton-conducting membrane transporter J8N08_04410 PF03099 Biotin/lipoate A/B protein ligase family J8N08_04410 PF08279 HTH domain J8N08_04410 PF02237 Biotin protein ligase C terminal domain J8N08_04415 PF12706 Beta-lactamase superfamily domain J8N08_04415 PF17770 Ribonuclease J C-terminal domain J8N08_04415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain J8N08_04425 PF03129 Anticodon binding domain J8N08_04425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J8N08_04430 PF02687 FtsX-like permease family J8N08_04430 PF12704 MacB-like periplasmic core domain J8N08_04435 PF00005 ABC transporter J8N08_04440 PF07733 Bacterial DNA polymerase III alpha NTPase domain J8N08_04440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J8N08_04440 PF14579 Helix-hairpin-helix motif J8N08_04440 PF02811 PHP domain J8N08_04450 PF00817 impB/mucB/samB family J8N08_04450 PF11799 impB/mucB/samB family C-terminal domain J8N08_04460 PF00072 Response regulator receiver domain J8N08_04465 PF00990 Diguanylate cyclase, GGDEF domain J8N08_04465 PF00072 Response regulator receiver domain J8N08_04470 PF00471 Ribosomal protein L33 J8N08_04475 PF07690 Major Facilitator Superfamily J8N08_04490 PF17876 Cold shock domain J8N08_04490 PF08461 Ribonuclease R winged-helix domain J8N08_04490 PF08206 Ribonuclease B OB domain J8N08_04490 PF00773 RNB domain J8N08_04490 PF00575 S1 RNA binding domain J8N08_04495 PF01131 DNA topoisomerase J8N08_04495 PF01751 Toprim domain J8N08_04495 PF13368 Topoisomerase C-terminal repeat J8N08_04495 PF01396 Topoisomerase DNA binding C4 zinc finger J8N08_04505 PF02481 DNA recombination-mediator protein A J8N08_04505 PF17782 DprA winged helix domain J8N08_04510 PF02660 Glycerol-3-phosphate acyltransferase J8N08_04515 PF01979 Amidohydrolase family J8N08_04520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain J8N08_04520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain J8N08_04525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_04525 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_04525 PF18158 Adaptive response protein AidB N-terminal domain J8N08_04530 PF00583 Acetyltransferase (GNAT) family J8N08_04550 PF03652 Holliday junction resolvase J8N08_04555 PF08274 PhnA Zinc-Ribbon J8N08_04555 PF03831 PhnA domain J8N08_04565 PF02686 Glu-tRNAGln amidotransferase C subunit J8N08_04570 PF01425 Amidase J8N08_04575 PF09857 Putative toxin of bacterial toxin-antitoxin pair J8N08_04580 PF00583 Acetyltransferase (GNAT) family J8N08_04590 PF02934 GatB/GatE catalytic domain J8N08_04590 PF02637 GatB domain J8N08_04600 PF00583 Acetyltransferase (GNAT) family J8N08_04615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase J8N08_04620 PF02785 Biotin carboxylase C-terminal domain J8N08_04620 PF00289 Biotin carboxylase, N-terminal domain J8N08_04620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_04625 PF00364 Biotin-requiring enzyme J8N08_04630 PF01220 Dehydroquinase class II J8N08_04635 PF13462 Thioredoxin J8N08_04635 PF06965 Na+/H+ antiporter 1 J8N08_04640 PF00155 Aminotransferase class I and II J8N08_04665 PF00575 S1 RNA binding domain J8N08_04665 PF12111 Polyribonucleotide phosphorylase C terminal J8N08_04665 PF10150 Ribonuclease E/G family J8N08_04670 PF01520 N-acetylmuramoyl-L-alanine amidase J8N08_04675 PF17092 Penicillin-binding protein OB-like domain J8N08_04675 PF00912 Transglycosylase J8N08_04675 PF00905 Penicillin binding protein transpeptidase domain J8N08_04695 PF01513 ATP-NAD kinase J8N08_04700 PF02567 Phenazine biosynthesis-like protein J8N08_04715 PF00111 2Fe-2S iron-sulfur cluster binding domain J8N08_04725 PF00809 Pterin binding enzyme J8N08_04730 PF02152 Dihydroneopterin aldolase J8N08_04735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) J8N08_04745 PF05128 Domain of unknown function (DUF697) J8N08_04750 PF04317 YcjX-like family, DUF463 J8N08_04760 PF01258 Prokaryotic dksA/traR C4-type zinc finger J8N08_04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_04775 PF00512 His Kinase A (phospho-acceptor) domain J8N08_04775 PF08448 PAS fold J8N08_04775 PF13188 PAS domain J8N08_04775 PF00072 Response regulator receiver domain J8N08_04780 PF02617 ATP-dependent Clp protease adaptor protein ClpS J8N08_04785 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_04785 PF17871 AAA lid domain J8N08_04785 PF02861 Clp amino terminal domain, pathogenicity island component J8N08_04785 PF10431 C-terminal, D2-small domain, of ClpB protein J8N08_04785 PF07724 AAA domain (Cdc48 subfamily) J8N08_04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_04810 PF03466 LysR substrate binding domain J8N08_04820 PF01230 HIT domain J8N08_04845 PF00318 Ribosomal protein S2 J8N08_04850 PF00889 Elongation factor TS J8N08_04855 PF00696 Amino acid kinase family J8N08_04860 PF01765 Ribosome recycling factor J8N08_04865 PF01255 Putative undecaprenyl diphosphate synthase J8N08_04875 PF17820 PDZ domain J8N08_04875 PF02163 Peptidase family M50 J8N08_04880 PF01103 Surface antigen J8N08_04880 PF07244 Surface antigen variable number repeat J8N08_04885 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_04885 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD J8N08_04890 PF07977 FabA-like domain J8N08_04895 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 J8N08_04895 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_04900 PF17930 LpxI N-terminal domain J8N08_04900 PF06230 LpxI C-terminal domain J8N08_04905 PF02684 Lipid-A-disaccharide synthetase J8N08_04910 PF00285 Citrate synthase, C-terminal domain J8N08_04925 PF01726 LexA DNA binding domain J8N08_04925 PF00717 Peptidase S24-like J8N08_04935 PF00793 DAHP synthetase I family J8N08_04940 PF03952 Enolase, N-terminal domain J8N08_04940 PF00113 Enolase, C-terminal TIM barrel domain J8N08_04950 PF00676 Dehydrogenase E1 component J8N08_04955 PF00364 Biotin-requiring enzyme J8N08_04955 PF02779 Transketolase, pyrimidine binding domain J8N08_04955 PF02780 Transketolase, C-terminal domain J8N08_04960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J8N08_04960 PF00364 Biotin-requiring enzyme J8N08_04960 PF02817 e3 binding domain J8N08_04970 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_04970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J8N08_04980 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J8N08_04980 PF04055 Radical SAM superfamily J8N08_04985 PF00892 EamA-like transporter family J8N08_05005 PF03364 Polyketide cyclase / dehydrase and lipid transport J8N08_05010 PF02464 Competence-damaged protein J8N08_05015 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase J8N08_05015 PF02542 YgbB family J8N08_05020 PF01207 Dihydrouridine synthase (Dus) J8N08_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_05025 PF00512 His Kinase A (phospho-acceptor) domain J8N08_05025 PF00989 PAS fold J8N08_05030 PF02954 Bacterial regulatory protein, Fis family J8N08_05030 PF00072 Response regulator receiver domain J8N08_05030 PF00158 Sigma-54 interaction domain J8N08_05035 PF00672 HAMP domain J8N08_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_05035 PF00512 His Kinase A (phospho-acceptor) domain J8N08_05035 PF00989 PAS fold J8N08_05040 PF02954 Bacterial regulatory protein, Fis family J8N08_05040 PF00072 Response regulator receiver domain J8N08_05040 PF00158 Sigma-54 interaction domain J8N08_05045 PF02080 TrkA-C domain J8N08_05045 PF02254 TrkA-N domain J8N08_05050 PF17209 Hfq protein J8N08_05055 PF16360 GTP-binding GTPase Middle Region J8N08_05055 PF13167 GTP-binding GTPase N-terminal J8N08_05055 PF01926 50S ribosome-binding GTPase J8N08_05060 PF03819 MazG nucleotide pyrophosphohydrolase domain J8N08_05070 PF10414 Sirohaem synthase dimerisation region J8N08_05070 PF14824 Sirohaem biosynthesis protein central J8N08_05070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_05090 PF00970 Oxidoreductase FAD-binding domain J8N08_05090 PF00175 Oxidoreductase NAD-binding domain J8N08_05095 PF07690 Major Facilitator Superfamily J8N08_05110 PF02347 Glycine cleavage system P-protein J8N08_05115 PF01597 Glycine cleavage H-protein J8N08_05120 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8N08_05120 PF01571 Aminomethyltransferase folate-binding domain J8N08_05150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) J8N08_05155 PF00849 RNA pseudouridylate synthase J8N08_05155 PF01479 S4 domain J8N08_05160 PF13419 Haloacid dehalogenase-like hydrolase J8N08_05175 PF00440 Bacterial regulatory proteins, tetR family J8N08_05180 PF01042 Endoribonuclease L-PSP J8N08_05185 PF00756 Putative esterase J8N08_05195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 J8N08_05205 PF10417 C-terminal domain of 1-Cys peroxiredoxin J8N08_05205 PF00578 AhpC/TSA family J8N08_05230 PF08281 Sigma-70, region 4 J8N08_05230 PF04542 Sigma-70 region 2 J8N08_05265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_05265 PF03466 LysR substrate binding domain J8N08_05270 PF04303 PrpF protein J8N08_05280 PF00005 ABC transporter J8N08_05285 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_05290 PF00072 Response regulator receiver domain J8N08_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_05290 PF13426 PAS domain J8N08_05295 PF00072 Response regulator receiver domain J8N08_05300 PF08447 PAS fold J8N08_05300 PF07536 HWE histidine kinase J8N08_05300 PF13426 PAS domain J8N08_05305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_05305 PF13426 PAS domain J8N08_05305 PF00072 Response regulator receiver domain J8N08_05315 PF00034 Cytochrome c J8N08_05325 PF05199 GMC oxidoreductase J8N08_05325 PF00732 GMC oxidoreductase J8N08_05335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_05335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_05345 PF00356 Bacterial regulatory proteins, lacI family J8N08_05350 PF02653 Branched-chain amino acid transport system / permease component J8N08_05355 PF02653 Branched-chain amino acid transport system / permease component J8N08_05360 PF00005 ABC transporter J8N08_05365 PF13407 Periplasmic binding protein domain J8N08_05370 PF00075 RNase H J8N08_05380 PF13649 Methyltransferase domain J8N08_05385 PF00654 Voltage gated chloride channel J8N08_05390 PF03099 Biotin/lipoate A/B protein ligase family J8N08_05390 PF12706 Beta-lactamase superfamily domain J8N08_05395 PF01026 TatD related DNase J8N08_05400 PF08264 Anticodon-binding domain of tRNA J8N08_05400 PF09334 tRNA synthetases class I (M) J8N08_05405 PF09115 DNA polymerase III, delta subunit, C terminal J8N08_05410 PF02223 Thymidylate kinase J8N08_05415 PF07943 Penicillin-binding protein 5, C-terminal domain J8N08_05415 PF00768 D-alanyl-D-alanine carboxypeptidase J8N08_05420 PF03330 Lytic transglycolase J8N08_05420 PF05036 Sporulation related domain J8N08_05465 PF00521 DNA gyrase/topoisomerase IV, subunit A J8N08_05465 PF03989 DNA gyrase C-terminal domain, beta-propeller J8N08_05470 PF01914 MarC family integral membrane protein J8N08_05475 PF00571 CBS domain J8N08_05475 PF01743 Poly A polymerase head domain J8N08_05480 PF00436 Single-strand binding protein family J8N08_05485 PF17755 UvrA DNA-binding domain J8N08_05485 PF17760 UvrA interaction domain J8N08_05495 PF01207 Dihydrouridine synthase (Dus) J8N08_05515 PF05974 Domain of unknown function (DUF892) J8N08_05520 PF01557 Fumarylacetoacetate (FAA) hydrolase family J8N08_05525 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_05535 PF00950 ABC 3 transport family J8N08_05540 PF00005 ABC transporter J8N08_05545 PF01297 Zinc-uptake complex component A periplasmic J8N08_05560 PF00248 Aldo/keto reductase family J8N08_05570 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J8N08_05570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_05575 PF03597 Cytochrome oxidase maturation protein cbb3-type J8N08_05585 PF05751 FixH J8N08_05590 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase J8N08_05590 PF13746 4Fe-4S dicluster domain J8N08_05590 PF12801 4Fe-4S binding domain J8N08_05605 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP J8N08_05605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III J8N08_05620 PF00115 Cytochrome C and Quinol oxidase polypeptide I J8N08_05625 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase J8N08_05640 PF00376 MerR family regulatory protein J8N08_05640 PF09278 MerR, DNA binding J8N08_05645 PF00571 CBS domain J8N08_05645 PF01769 Divalent cation transporter J8N08_05645 PF03448 MgtE intracellular N domain J8N08_05650 PF00384 Molybdopterin oxidoreductase J8N08_05660 PF01327 Polypeptide deformylase J8N08_05690 PF03099 Biotin/lipoate A/B protein ligase family J8N08_05695 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_05695 PF00107 Zinc-binding dehydrogenase J8N08_05720 PF02355 Protein export membrane protein J8N08_05720 PF07549 SecD/SecF GG Motif J8N08_05725 PF02699 Preprotein translocase subunit J8N08_05735 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J8N08_05735 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_05745 PF00067 Cytochrome P450 J8N08_05755 PF06426 Serine acetyltransferase, N-terminal J8N08_05755 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_05760 PF00561 alpha/beta hydrolase fold J8N08_05770 PF01494 FAD binding domain J8N08_05775 PF01053 Cys/Met metabolism PLP-dependent enzyme J8N08_05780 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_05785 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_05790 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_05795 PF00005 ABC transporter J8N08_05810 PF01368 DHH family J8N08_05810 PF17768 RecJ OB domain J8N08_05810 PF02272 DHHA1 domain J8N08_05820 PF01842 ACT domain J8N08_05820 PF00742 Homoserine dehydrogenase J8N08_05820 PF03447 Homoserine dehydrogenase, NAD binding domain J8N08_05825 PF00155 Aminotransferase class I and II J8N08_05830 PF01156 Inosine-uridine preferring nucleoside hydrolase J8N08_05835 PF01925 Sulfite exporter TauE/SafE J8N08_05850 PF00107 Zinc-binding dehydrogenase J8N08_05850 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_05855 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_05855 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_05865 PF07977 FabA-like domain J8N08_05870 PF00550 Phosphopantetheine attachment site J8N08_05875 PF04055 Radical SAM superfamily J8N08_05880 PF13545 Crp-like helix-turn-helix domain J8N08_05880 PF00027 Cyclic nucleotide-binding domain J8N08_05890 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus J8N08_05895 PF03749 Sugar fermentation stimulation protein RE domain J8N08_05895 PF17746 SfsA N-terminal OB domain J8N08_05900 PF00557 Metallopeptidase family M24 J8N08_05905 PF04002 RadC-like JAB domain J8N08_05920 PF01474 Class-II DAHP synthetase family J8N08_05925 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_05925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J8N08_05935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J8N08_05940 PF13419 Haloacid dehalogenase-like hydrolase J8N08_05955 PF10415 Fumarase C C-terminus J8N08_05955 PF00206 Lyase J8N08_05965 PF00117 Glutamine amidotransferase class-I J8N08_05965 PF06418 CTP synthase N-terminus J8N08_05970 PF03840 Preprotein translocase SecG subunit J8N08_05975 PF00121 Triosephosphate isomerase J8N08_05985 PF00204 DNA gyrase B J8N08_05985 PF01751 Toprim domain J8N08_05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_05985 PF00986 DNA gyrase B subunit, carboxyl terminus J8N08_05990 PF00574 Clp protease J8N08_06000 PF01022 Bacterial regulatory protein, arsR family J8N08_06005 PF13091 PLD-like domain J8N08_06010 PF00072 Response regulator receiver domain J8N08_06015 PF01571 Aminomethyltransferase folate-binding domain J8N08_06015 PF16350 FAD dependent oxidoreductase central domain J8N08_06015 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8N08_06015 PF01266 FAD dependent oxidoreductase J8N08_06030 PF12794 Mechanosensitive ion channel inner membrane domain 1 J8N08_06030 PF12795 Mechanosensitive ion channel porin domain J8N08_06030 PF00924 Mechanosensitive ion channel J8N08_06095 PF00005 ABC transporter J8N08_06100 PF02405 Permease MlaE J8N08_06105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_06105 PF13378 Enolase C-terminal domain-like J8N08_06115 PF00390 Malic enzyme, N-terminal domain J8N08_06115 PF03949 Malic enzyme, NAD binding domain J8N08_06115 PF01515 Phosphate acetyl/butaryl transferase J8N08_06125 PF00881 Nitroreductase family J8N08_06130 PF07676 WD40-like Beta Propeller Repeat J8N08_06140 PF00795 Carbon-nitrogen hydrolase J8N08_06140 PF02540 NAD synthase J8N08_06145 PF00884 Sulfatase J8N08_06155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J8N08_06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_06175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase J8N08_06175 PF05698 Bacterial trigger factor protein (TF) C-terminus J8N08_06175 PF05697 Bacterial trigger factor protein (TF) J8N08_06195 PF01134 Glucose inhibited division protein A J8N08_06215 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_06215 PF00107 Zinc-binding dehydrogenase J8N08_06225 PF00550 Phosphopantetheine attachment site J8N08_06230 PF00975 Thioesterase domain J8N08_06230 PF00501 AMP-binding enzyme J8N08_06230 PF00550 Phosphopantetheine attachment site J8N08_06230 PF13193 AMP-binding enzyme C-terminal domain J8N08_06230 PF00668 Condensation domain J8N08_06235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J8N08_06235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J8N08_06240 PF00117 Glutamine amidotransferase class-I J8N08_06240 PF00425 chorismate binding enzyme J8N08_06240 PF04715 Anthranilate synthase component I, N terminal region J8N08_06245 PF01702 Queuine tRNA-ribosyltransferase J8N08_06250 PF02547 Queuosine biosynthesis protein J8N08_06255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J8N08_06260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD J8N08_06265 PF01467 Cytidylyltransferase-like J8N08_06280 PF02885 Glycosyl transferase family, helical bundle domain J8N08_06280 PF00591 Glycosyl transferase family, a/b domain J8N08_06285 PF00218 Indole-3-glycerol phosphate synthase J8N08_06290 PF01967 MoaC family J8N08_06295 PF03454 MoeA C-terminal region (domain IV) J8N08_06295 PF03453 MoeA N-terminal region (domain I and II) J8N08_06295 PF00994 Probable molybdopterin binding domain J8N08_06300 PF00990 Diguanylate cyclase, GGDEF domain J8N08_06300 PF17158 Membrane-associated sensor, integral membrane domain J8N08_06310 PF00999 Sodium/hydrogen exchanger family J8N08_06310 PF02254 TrkA-N domain J8N08_06320 PF04055 Radical SAM superfamily J8N08_06320 PF06463 Molybdenum Cofactor Synthesis C J8N08_06325 PF00892 EamA-like transporter family J8N08_06330 PF07690 Major Facilitator Superfamily J8N08_06335 PF12804 MobA-like NTP transferase domain J8N08_06340 PF03205 Molybdopterin guanine dinucleotide synthesis protein B J8N08_06345 PF01551 Peptidase family M23 J8N08_06355 PF01975 Survival protein SurE J8N08_06360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J8N08_06360 PF02403 Seryl-tRNA synthetase N-terminal domain J8N08_06365 PF00902 Sec-independent protein translocase protein (TatC) J8N08_06370 PF02416 mttA/Hcf106 family J8N08_06375 PF02416 mttA/Hcf106 family J8N08_06380 PF04079 Segregation and condensation complex subunit ScpB J8N08_06385 PF02616 Segregation and condensation protein ScpA J8N08_06390 PF00933 Glycosyl hydrolase family 3 N terminal domain J8N08_06400 PF05746 DALR anticodon binding domain J8N08_06400 PF00750 tRNA synthetases class I (R) J8N08_06400 PF03485 Arginyl tRNA synthetase N terminal domain J8N08_06405 PF01966 HD domain J8N08_06405 PF13286 Phosphohydrolase-associated domain J8N08_06410 PF01521 Iron-sulphur cluster biosynthesis J8N08_06420 PF08238 Sel1 repeat J8N08_06435 PF08264 Anticodon-binding domain of tRNA J8N08_06435 PF00133 tRNA synthetases class I (I, L, M and V) J8N08_06435 PF10458 Valyl tRNA synthetase tRNA binding arm J8N08_06470 PF03358 NADPH-dependent FMN reductase J8N08_06475 PF18146 Damage-inducible protein CinA KH domain J8N08_06475 PF00994 Probable molybdopterin binding domain J8N08_06475 PF02464 Competence-damaged protein J8N08_06480 PF00582 Universal stress protein family J8N08_06485 PF00156 Phosphoribosyl transferase domain J8N08_06490 PF02867 Ribonucleotide reductase, barrel domain J8N08_06490 PF08471 Class II vitamin B12-dependent ribonucleotide reductase J8N08_06500 PF01566 Natural resistance-associated macrophage protein J8N08_06510 PF00664 ABC transporter transmembrane region J8N08_06510 PF00005 ABC transporter J8N08_06515 PF01594 AI-2E family transporter J8N08_06520 PF00583 Acetyltransferase (GNAT) family J8N08_06550 PF02824 TGS domain J8N08_06550 PF03129 Anticodon binding domain J8N08_06550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) J8N08_06550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J8N08_06560 PF01809 Putative membrane protein insertion efficiency factor J8N08_06570 PF01227 GTP cyclohydrolase I J8N08_06575 PF01502 Phosphoribosyl-AMP cyclohydrolase J8N08_06580 PF01734 Patatin-like phospholipase J8N08_06585 PF00478 IMP dehydrogenase / GMP reductase domain J8N08_06585 PF00571 CBS domain J8N08_06615 PF03313 Serine dehydratase alpha chain J8N08_06615 PF03315 Serine dehydratase beta chain J8N08_06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_06650 PF03466 LysR substrate binding domain J8N08_06660 PF01965 DJ-1/PfpI family J8N08_06660 PF12833 Helix-turn-helix domain J8N08_06665 PF03853 YjeF-related protein N-terminus J8N08_06665 PF01256 Carbohydrate kinase J8N08_06675 PF00543 Nitrogen regulatory protein P-II J8N08_06680 PF00120 Glutamine synthetase, catalytic domain J8N08_06680 PF03951 Glutamine synthetase, beta-Grasp domain J8N08_06690 PF08755 Hemimethylated DNA-binding protein YccV like J8N08_06700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_06710 PF00892 EamA-like transporter family J8N08_06720 PF17757 UvrB interaction domain J8N08_06720 PF00271 Helicase conserved C-terminal domain J8N08_06720 PF03461 TRCF domain J8N08_06720 PF02559 CarD-like/TRCF domain J8N08_06720 PF00270 DEAD/DEAH box helicase J8N08_06730 PF00270 DEAD/DEAH box helicase J8N08_06730 PF00271 Helicase conserved C-terminal domain J8N08_06730 PF17191 RecG wedge domain J8N08_06745 PF01850 PIN domain J8N08_06760 PF01380 SIS domain J8N08_06765 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_06765 PF14602 Hexapeptide repeat of succinyl-transferase J8N08_06765 PF12804 MobA-like NTP transferase domain J8N08_06770 PF07729 FCD domain J8N08_06770 PF00392 Bacterial regulatory proteins, gntR family J8N08_06775 PF02608 ABC transporter substrate-binding protein PnrA-like J8N08_06780 PF02653 Branched-chain amino acid transport system / permease component J8N08_06785 PF02653 Branched-chain amino acid transport system / permease component J8N08_06790 PF00005 ABC transporter J8N08_06800 PF01494 FAD binding domain J8N08_06805 PF03547 Membrane transport protein J8N08_06810 PF02683 Cytochrome C biogenesis protein transmembrane region J8N08_06830 PF12900 Pyridoxamine 5'-phosphate oxidase J8N08_06845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_06850 PF00313 'Cold-shock' DNA-binding domain J8N08_06905 PF00005 ABC transporter J8N08_06905 PF02687 FtsX-like permease family J8N08_06905 PF12704 MacB-like periplasmic core domain J8N08_06910 PF00005 ABC transporter J8N08_06910 PF02687 FtsX-like permease family J8N08_06910 PF12704 MacB-like periplasmic core domain J8N08_06920 PF01521 Iron-sulphur cluster biosynthesis J8N08_06925 PF01883 Iron-sulfur cluster assembly protein J8N08_06930 PF00266 Aminotransferase class-V J8N08_06935 PF01458 Uncharacterized protein family (UPF0051) J8N08_06940 PF00005 ABC transporter J8N08_06945 PF01458 Uncharacterized protein family (UPF0051) J8N08_06950 PF00266 Aminotransferase class-V J8N08_06955 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J8N08_06960 PF03702 Anhydro-N-acetylmuramic acid kinase J8N08_06965 PF00579 tRNA synthetases class I (W and Y) J8N08_06975 PF00578 AhpC/TSA family J8N08_06980 PF04305 Protein of unknown function (DUF455) J8N08_06985 PF01476 LysM domain J8N08_06985 PF08525 Opacity-associated protein A N-terminal motif J8N08_06985 PF01551 Peptidase family M23 J8N08_06990 PF00270 DEAD/DEAH box helicase J8N08_06990 PF00271 Helicase conserved C-terminal domain J8N08_07005 PF00834 Ribulose-phosphate 3 epimerase family J8N08_07015 PF10397 Adenylosuccinate lyase C-terminus J8N08_07015 PF00206 Lyase J8N08_07025 PF01259 SAICAR synthetase J8N08_07030 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase J8N08_07050 PF00392 Bacterial regulatory proteins, gntR family J8N08_07050 PF00155 Aminotransferase class I and II J8N08_07060 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain J8N08_07060 PF02769 AIR synthase related protein, C-terminal domain J8N08_07060 PF00586 AIR synthase related protein, N-terminal domain J8N08_07085 PF00462 Glutaredoxin J8N08_07090 PF07690 Major Facilitator Superfamily J8N08_07095 PF00459 Inositol monophosphatase family J8N08_07100 PF00459 Inositol monophosphatase family J8N08_07105 PF01171 PP-loop family J8N08_07110 PF04960 Glutaminase J8N08_07115 PF00163 Ribosomal protein S4/S9 N-terminal domain J8N08_07115 PF01479 S4 domain J8N08_07120 PF03741 Integral membrane protein TerC family J8N08_07130 PF00892 EamA-like transporter family J8N08_07135 PF01810 LysE type translocator J8N08_07145 PF01177 Asp/Glu/Hydantoin racemase J8N08_07150 PF00588 SpoU rRNA Methylase family J8N08_07160 PF00180 Isocitrate/isopropylmalate dehydrogenase J8N08_07175 PF02272 DHHA1 domain J8N08_07175 PF01411 tRNA synthetases class II (A) J8N08_07175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain J8N08_07180 PF00154 recA bacterial DNA recombination protein J8N08_07185 PF00294 pfkB family carbohydrate kinase J8N08_07190 PF04227 Indigoidine synthase A like protein J8N08_07195 PF00691 OmpA family J8N08_07195 PF01389 OmpA-like transmembrane domain J8N08_07200 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_07205 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_07210 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_07215 PF06233 Usg-like family J8N08_07220 PF08241 Methyltransferase domain J8N08_07225 PF09084 NMT1/THI5 like J8N08_07230 PF13404 AsnC-type helix-turn-helix domain J8N08_07230 PF01037 Lrp/AsnC ligand binding domain J8N08_07235 PF03167 Uracil DNA glycosylase superfamily J8N08_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_07245 PF00989 PAS fold J8N08_07245 PF00512 His Kinase A (phospho-acceptor) domain J8N08_07250 PF01219 Prokaryotic diacylglycerol kinase J8N08_07255 PF02277 Phosphoribosyltransferase J8N08_07260 PF02654 Cobalamin-5-phosphate synthase J8N08_07275 PF01061 ABC-2 type transporter J8N08_07280 PF00005 ABC transporter J8N08_07285 PF01925 Sulfite exporter TauE/SafE J8N08_07295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_07295 PF17200 Single Cache domain 2 J8N08_07295 PF00672 HAMP domain J8N08_07295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_07295 PF17200 Single Cache domain 2 J8N08_07295 PF00672 HAMP domain J8N08_07305 PF16193 AAA C-terminal domain J8N08_07305 PF12002 MgsA AAA+ ATPase C terminal J8N08_07305 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_07310 PF13180 PDZ domain J8N08_07310 PF00595 PDZ domain J8N08_07325 PF00920 Dehydratase family J8N08_07330 PF00174 Oxidoreductase molybdopterin binding domain J8N08_07335 PF01794 Ferric reductase like transmembrane component J8N08_07345 PF05675 Protein of unknown function (DUF817) J8N08_07355 PF01196 Ribosomal protein L17 J8N08_07360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain J8N08_07360 PF01000 RNA polymerase Rpb3/RpoA insert domain J8N08_07360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain J8N08_07365 PF00411 Ribosomal protein S11 J8N08_07370 PF00416 Ribosomal protein S13/S18 J8N08_07380 PF00344 SecY translocase J8N08_07385 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A J8N08_07390 PF00327 Ribosomal protein L30p/L7e J8N08_07395 PF00333 Ribosomal protein S5, N-terminal domain J8N08_07395 PF03719 Ribosomal protein S5, C-terminal domain J8N08_07400 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast J8N08_07405 PF00347 Ribosomal protein L6 J8N08_07410 PF00410 Ribosomal protein S8 J8N08_07415 PF00253 Ribosomal protein S14p/S29e J8N08_07420 PF00281 Ribosomal protein L5 J8N08_07420 PF00673 ribosomal L5P family C-terminus J8N08_07425 PF00467 KOW motif J8N08_07425 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 J8N08_07430 PF00238 Ribosomal protein L14p/L23e J8N08_07435 PF00366 Ribosomal protein S17 J8N08_07440 PF00831 Ribosomal L29 protein J8N08_07445 PF00252 Ribosomal protein L16p/L10e J8N08_07450 PF07650 KH domain J8N08_07450 PF00189 Ribosomal protein S3, C-terminal domain J8N08_07455 PF00237 Ribosomal protein L22p/L17e J8N08_07460 PF00203 Ribosomal protein S19 J8N08_07465 PF03947 Ribosomal Proteins L2, C-terminal domain J8N08_07465 PF00181 Ribosomal Proteins L2, RNA binding domain J8N08_07470 PF00276 Ribosomal protein L23 J8N08_07475 PF00573 Ribosomal protein L4/L1 family J8N08_07480 PF00297 Ribosomal protein L3 J8N08_07485 PF00338 Ribosomal protein S10p/S20e J8N08_07490 PF00009 Elongation factor Tu GTP binding domain J8N08_07490 PF03143 Elongation factor Tu C-terminal domain J8N08_07490 PF03144 Elongation factor Tu domain 2 J8N08_07495 PF00009 Elongation factor Tu GTP binding domain J8N08_07495 PF03764 Elongation factor G, domain IV J8N08_07495 PF00679 Elongation factor G C-terminus J8N08_07495 PF14492 Elongation Factor G, domain II J8N08_07495 PF03144 Elongation factor Tu domain 2 J8N08_07500 PF00177 Ribosomal protein S7p/S5e J8N08_07505 PF00164 Ribosomal protein S12/S23 J8N08_07520 PF00623 RNA polymerase Rpb1, domain 2 J8N08_07520 PF04983 RNA polymerase Rpb1, domain 3 J8N08_07520 PF05000 RNA polymerase Rpb1, domain 4 J8N08_07520 PF04998 RNA polymerase Rpb1, domain 5 J8N08_07520 PF04997 RNA polymerase Rpb1, domain 1 J8N08_07525 PF10385 RNA polymerase beta subunit external 1 domain J8N08_07525 PF04563 RNA polymerase beta subunit J8N08_07525 PF00562 RNA polymerase Rpb2, domain 6 J8N08_07525 PF04565 RNA polymerase Rpb2, domain 3 J8N08_07525 PF04560 RNA polymerase Rpb2, domain 7 J8N08_07525 PF04561 RNA polymerase Rpb2, domain 2 J8N08_07535 PF00542 Ribosomal protein L7/L12 C-terminal domain J8N08_07535 PF16320 Ribosomal protein L7/L12 dimerisation domain J8N08_07540 PF00466 Ribosomal protein L10 J8N08_07545 PF00687 Ribosomal protein L1p/L10e family J8N08_07550 PF00298 Ribosomal protein L11, RNA binding domain J8N08_07550 PF03946 Ribosomal protein L11, N-terminal domain J8N08_07555 PF00467 KOW motif J8N08_07555 PF02357 Transcription termination factor nusG J8N08_07560 PF00584 SecE/Sec61-gamma subunits of protein translocation complex J8N08_07575 PF03144 Elongation factor Tu domain 2 J8N08_07575 PF00009 Elongation factor Tu GTP binding domain J8N08_07575 PF03143 Elongation factor Tu C-terminal domain J8N08_07580 PF03741 Integral membrane protein TerC family J8N08_07610 PF08032 RNA 2'-O ribose methyltransferase substrate binding J8N08_07610 PF00588 SpoU rRNA Methylase family J8N08_07615 PF03061 Thioesterase superfamily J8N08_07640 PF13460 NAD(P)H-binding J8N08_07645 PF01638 HxlR-like helix-turn-helix J8N08_07655 PF17757 UvrB interaction domain J8N08_07655 PF02151 UvrB/uvrC motif J8N08_07655 PF04851 Type III restriction enzyme, res subunit J8N08_07655 PF00271 Helicase conserved C-terminal domain J8N08_07655 PF12344 Ultra-violet resistance protein B J8N08_07660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J8N08_07660 PF00756 Putative esterase J8N08_07680 PF00684 DnaJ central domain J8N08_07680 PF00226 DnaJ domain J8N08_07680 PF01556 DnaJ C terminal domain J8N08_07695 PF17151 Periplasmic sensor domain J8N08_07695 PF00990 Diguanylate cyclase, GGDEF domain J8N08_07705 PF08402 TOBE domain J8N08_07705 PF00005 ABC transporter J8N08_07715 PF01547 Bacterial extracellular solute-binding protein J8N08_07720 PF00155 Aminotransferase class I and II J8N08_07735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain J8N08_07735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain J8N08_07740 PF00440 Bacterial regulatory proteins, tetR family J8N08_07745 PF06719 AraC-type transcriptional regulator N-terminus J8N08_07745 PF12833 Helix-turn-helix domain J8N08_07750 PF00107 Zinc-binding dehydrogenase J8N08_07750 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_07755 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_07760 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ J8N08_07765 PF03472 Autoinducer binding domain J8N08_07765 PF00196 Bacterial regulatory proteins, luxR family J8N08_07770 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain J8N08_07770 PF14490 Helix-hairpin-helix containing domain J8N08_07770 PF13538 UvrD-like helicase C-terminal domain J8N08_07775 PF08338 Domain of unknown function (DUF1731) J8N08_07775 PF01370 NAD dependent epimerase/dehydratase family J8N08_07800 PF04542 Sigma-70 region 2 J8N08_07800 PF08281 Sigma-70, region 4 J8N08_07810 PF01810 LysE type translocator J8N08_07815 PF00248 Aldo/keto reductase family J8N08_07830 PF10369 Small subunit of acetolactate synthase J8N08_07835 PF00205 Thiamine pyrophosphate enzyme, central domain J8N08_07835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8N08_07835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8N08_07855 PF13302 Acetyltransferase (GNAT) domain J8N08_07865 PF13180 PDZ domain J8N08_07870 PF01145 SPFH domain / Band 7 family J8N08_07875 PF01145 SPFH domain / Band 7 family J8N08_07880 PF00186 Dihydrofolate reductase J8N08_07885 PF00303 Thymidylate synthase J8N08_07925 PF02913 FAD linked oxidases, C-terminal domain J8N08_07925 PF01565 FAD binding domain J8N08_07935 PF00873 AcrB/AcrD/AcrF family J8N08_07940 PF13533 Biotin-lipoyl like J8N08_07950 PF00580 UvrD/REP helicase N-terminal domain J8N08_07950 PF13361 UvrD-like helicase C-terminal domain J8N08_07960 PF13977 BetI-type transcriptional repressor, C-terminal J8N08_07960 PF00440 Bacterial regulatory proteins, tetR family J8N08_07965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J8N08_07970 PF00561 alpha/beta hydrolase fold J8N08_07990 PF00857 Isochorismatase family J8N08_08010 PF01321 Creatinase/Prolidase N-terminal domain J8N08_08010 PF00557 Metallopeptidase family M24 J8N08_08025 PF02630 SCO1/SenC J8N08_08035 PF01584 CheW-like domain J8N08_08050 PF03466 LysR substrate binding domain J8N08_08050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_08060 PF00583 Acetyltransferase (GNAT) family J8N08_08070 PF00533 BRCA1 C Terminus (BRCT) domain J8N08_08070 PF01653 NAD-dependent DNA ligase adenylation domain J8N08_08070 PF03120 NAD-dependent DNA ligase OB-fold domain J8N08_08070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain J8N08_08070 PF12826 Helix-hairpin-helix motif J8N08_08075 PF01810 LysE type translocator J8N08_08080 PF02463 RecF/RecN/SMC N terminal domain J8N08_08085 PF13525 Outer membrane lipoprotein J8N08_08090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase J8N08_08095 PF12327 FtsZ family, C-terminal domain J8N08_08095 PF00091 Tubulin/FtsZ family, GTPase domain J8N08_08100 PF02491 SHS2 domain inserted in FTSA J8N08_08105 PF08478 POTRA domain, FtsQ-type J8N08_08105 PF03799 Cell division protein FtsQ J8N08_08110 PF07478 D-ala D-ala ligase C-terminus J8N08_08110 PF01820 D-ala D-ala ligase N-terminus J8N08_08115 PF07690 Major Facilitator Superfamily J8N08_08115 PF00083 Sugar (and other) transporter J8N08_08120 PF00990 Diguanylate cyclase, GGDEF domain J8N08_08125 PF01565 FAD binding domain J8N08_08125 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain J8N08_08130 PF08245 Mur ligase middle domain J8N08_08130 PF02875 Mur ligase family, glutamate ligase domain J8N08_08130 PF01225 Mur ligase family, catalytic domain J8N08_08135 PF03033 Glycosyltransferase family 28 N-terminal domain J8N08_08135 PF04101 Glycosyltransferase family 28 C-terminal domain J8N08_08140 PF01098 Cell cycle protein J8N08_08145 PF08245 Mur ligase middle domain J8N08_08145 PF02875 Mur ligase family, glutamate ligase domain J8N08_08150 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 J8N08_08150 PF00953 Glycosyl transferase family 4 J8N08_08155 PF08245 Mur ligase middle domain J8N08_08155 PF02875 Mur ligase family, glutamate ligase domain J8N08_08155 PF01225 Mur ligase family, catalytic domain J8N08_08160 PF08245 Mur ligase middle domain J8N08_08160 PF02875 Mur ligase family, glutamate ligase domain J8N08_08160 PF01225 Mur ligase family, catalytic domain J8N08_08165 PF00905 Penicillin binding protein transpeptidase domain J8N08_08165 PF03717 Penicillin-binding Protein dimerisation domain J8N08_08175 PF01795 MraW methylase family J8N08_08180 PF02381 MraZ protein, putative antitoxin-like J8N08_08185 PF03994 Domain of Unknown Function (DUF350) J8N08_08195 PF03738 Glutathionylspermidine synthase preATP-grasp J8N08_08220 PF01510 N-acetylmuramoyl-L-alanine amidase J8N08_08225 PF00226 DnaJ domain J8N08_08225 PF05099 Tellurite resistance protein TerB J8N08_08230 PF00365 Phosphofructokinase J8N08_08250 PF13649 Methyltransferase domain J8N08_08255 PF01183 Glycosyl hydrolases family 25 J8N08_08265 PF02219 Methylenetetrahydrofolate reductase J8N08_08270 PF01209 ubiE/COQ5 methyltransferase family J8N08_08275 PF12848 ABC transporter J8N08_08275 PF00005 ABC transporter J8N08_08280 PF12146 Serine aminopeptidase, S33 J8N08_08285 PF02515 CoA-transferase family III J8N08_08290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8N08_08290 PF00205 Thiamine pyrophosphate enzyme, central domain J8N08_08290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8N08_08300 PF01042 Endoribonuclease L-PSP J8N08_08315 PF01476 LysM domain J8N08_08315 PF03734 L,D-transpeptidase catalytic domain J8N08_08320 PF07690 Major Facilitator Superfamily J8N08_08330 PF10609 NUBPL iron-transfer P-loop NTPase J8N08_08340 PF00465 Iron-containing alcohol dehydrogenase J8N08_08345 PF00171 Aldehyde dehydrogenase family J8N08_08350 PF03951 Glutamine synthetase, beta-Grasp domain J8N08_08350 PF00120 Glutamine synthetase, catalytic domain J8N08_08355 PF13520 Amino acid permease J8N08_08365 PF01380 SIS domain J8N08_08365 PF01418 Helix-turn-helix domain, rpiR family J8N08_08385 PF00005 ABC transporter J8N08_08385 PF08402 TOBE domain J8N08_08390 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_08390 PF00107 Zinc-binding dehydrogenase J8N08_08405 PF07690 Major Facilitator Superfamily J8N08_08410 PF02310 B12 binding domain J8N08_08410 PF02607 B12 binding domain J8N08_08410 PF02965 Vitamin B12 dependent methionine synthase, activation domain J8N08_08410 PF00809 Pterin binding enzyme J8N08_08410 PF02574 Homocysteine S-methyltransferase J8N08_08430 PF13505 Outer membrane protein beta-barrel domain J8N08_08445 PF04402 Protein of unknown function (DUF541) J8N08_08455 PF01894 Uncharacterised protein family UPF0047 J8N08_08460 PF01590 GAF domain J8N08_08460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_08460 PF00512 His Kinase A (phospho-acceptor) domain J8N08_08460 PF08446 PAS fold J8N08_08460 PF00360 Phytochrome region J8N08_08470 PF04545 Sigma-70, region 4 J8N08_08470 PF04539 Sigma-70 region 3 J8N08_08470 PF04542 Sigma-70 region 2 J8N08_08470 PF00140 Sigma-70 factor, region 1.2 J8N08_08470 PF03979 Sigma-70 factor, region 1.1 J8N08_08470 PF04546 Sigma-70, non-essential region J8N08_08475 PF10410 DnaB-helicase binding domain of primase J8N08_08475 PF08278 DNA primase DnaG DnaB-binding J8N08_08475 PF08275 DNA primase catalytic core, N-terminal domain J8N08_08475 PF01807 CHC2 zinc finger J8N08_08485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain J8N08_08485 PF00117 Glutamine amidotransferase class-I J8N08_08490 PF01554 MatE J8N08_08495 PF02743 Cache domain J8N08_08495 PF00672 HAMP domain J8N08_08495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_08505 PF04228 Putative neutral zinc metallopeptidase J8N08_08520 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_08520 PF02142 MGS-like domain J8N08_08520 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain J8N08_08525 PF00990 Diguanylate cyclase, GGDEF domain J8N08_08525 PF17158 Membrane-associated sensor, integral membrane domain J8N08_08530 PF03167 Uracil DNA glycosylase superfamily J8N08_08540 PF01272 Transcription elongation factor, GreA/GreB, C-term J8N08_08540 PF03449 Transcription elongation factor, N-terminal J8N08_08545 PF00534 Glycosyl transferases group 1 J8N08_08550 PF01037 Lrp/AsnC ligand binding domain J8N08_08555 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_08560 PF03466 LysR substrate binding domain J8N08_08570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8N08_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_08585 PF03466 LysR substrate binding domain J8N08_08595 PF01699 Sodium/calcium exchanger protein J8N08_08600 PF00155 Aminotransferase class I and II J8N08_08605 PF00563 EAL domain J8N08_08605 PF05231 MASE1 J8N08_08620 PF00313 'Cold-shock' DNA-binding domain J8N08_08625 PF00753 Metallo-beta-lactamase superfamily J8N08_08635 PF12802 MarR family J8N08_08640 PF00072 Response regulator receiver domain J8N08_08640 PF00486 Transcriptional regulatory protein, C terminal J8N08_08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_08645 PF16527 Two-component sensor protein CpxA, periplasmic domain J8N08_08645 PF00672 HAMP domain J8N08_08645 PF00512 His Kinase A (phospho-acceptor) domain J8N08_08650 PF01588 Putative tRNA binding domain J8N08_08655 PF03807 NADP oxidoreductase coenzyme F420-dependent J8N08_08655 PF14748 Pyrroline-5-carboxylate reductase dimerisation J8N08_08670 PF01790 Prolipoprotein diacylglyceryl transferase J8N08_08680 PF02578 Multi-copper polyphenol oxidoreductase laccase J8N08_08695 PF14572 Phosphoribosyl synthetase-associated domain J8N08_08695 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase J8N08_08705 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase J8N08_08715 PF00535 Glycosyl transferase family 2 J8N08_08720 PF00672 HAMP domain J8N08_08720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_08725 PF00171 Aldehyde dehydrogenase family J8N08_08730 PF02954 Bacterial regulatory protein, Fis family J8N08_08730 PF13426 PAS domain J8N08_08730 PF00158 Sigma-54 interaction domain J8N08_08735 PF03707 Bacterial signalling protein N terminal repeat J8N08_08735 PF00990 Diguanylate cyclase, GGDEF domain J8N08_08735 PF00563 EAL domain J8N08_08735 PF13188 PAS domain J8N08_08740 PF01386 Ribosomal L25p family J8N08_08740 PF14693 Ribosomal protein TL5, C-terminal domain J8N08_08745 PF00563 EAL domain J8N08_08745 PF08448 PAS fold J8N08_08745 PF00990 Diguanylate cyclase, GGDEF domain J8N08_08745 PF08447 PAS fold J8N08_08755 PF01195 Peptidyl-tRNA hydrolase J8N08_08765 PF02617 ATP-dependent Clp protease adaptor protein ClpS J8N08_08770 PF01926 50S ribosome-binding GTPase J8N08_08770 PF06071 Protein of unknown function (DUF933) J8N08_08790 PF00156 Phosphoribosyl transferase domain J8N08_08800 PF00032 Cytochrome b(C-terminal)/b6/petD J8N08_08800 PF02167 Cytochrome C1 family J8N08_08800 PF00033 Cytochrome b/b6/petB J8N08_08805 PF00032 Cytochrome b(C-terminal)/b6/petD J8N08_08805 PF00033 Cytochrome b/b6/petB J8N08_08810 PF00355 Rieske [2Fe-2S] domain J8N08_08810 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal J8N08_08820 PF00664 ABC transporter transmembrane region J8N08_08820 PF00005 ABC transporter J8N08_08825 PF00005 ABC transporter J8N08_08825 PF00664 ABC transporter transmembrane region J8N08_08835 PF00588 SpoU rRNA Methylase family J8N08_08840 PF02690 Na+/Pi-cotransporter J8N08_08850 PF01218 Coproporphyrinogen III oxidase J8N08_08865 PF12627 Probable RNA and SrmB- binding site of polymerase A J8N08_08865 PF13735 tRNA nucleotidyltransferase domain 2 putative J8N08_08865 PF01743 Poly A polymerase head domain J8N08_08870 PF00293 NUDIX domain J8N08_08880 PF17863 AAA lid domain J8N08_08880 PF07726 ATPase family associated with various cellular activities (AAA) J8N08_08900 PF00583 Acetyltransferase (GNAT) family J8N08_08905 PF07690 Major Facilitator Superfamily J8N08_08915 PF13409 Glutathione S-transferase, N-terminal domain J8N08_08930 PF00682 HMGL-like J8N08_08930 PF08502 LeuA allosteric (dimerisation) domain J8N08_08935 PF03594 Benzoate membrane transport protein J8N08_08940 PF06532 Negative regulator of sigma F J8N08_08945 PF04542 Sigma-70 region 2 J8N08_08945 PF04545 Sigma-70, region 4 J8N08_08955 PF00574 Clp protease J8N08_08960 PF04955 HupE / UreJ protein J8N08_08970 PF14489 QueF-like protein J8N08_08975 PF01545 Cation efflux family J8N08_08975 PF16916 Dimerisation domain of Zinc Transporter J8N08_08985 PF13458 Periplasmic binding protein J8N08_08995 PF01022 Bacterial regulatory protein, arsR family J8N08_09000 PF00571 CBS domain J8N08_09000 PF00005 ABC transporter J8N08_09005 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_09010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J8N08_09015 PF00265 Thymidine kinase J8N08_09020 PF00127 Copper binding proteins, plastocyanin/azurin family J8N08_09030 PF03472 Autoinducer binding domain J8N08_09030 PF00196 Bacterial regulatory proteins, luxR family J8N08_09035 PF03350 Uncharacterized protein family, UPF0114 J8N08_09040 PF07715 TonB-dependent Receptor Plug Domain J8N08_09040 PF04886 PT repeat J8N08_09040 PF00593 TonB dependent receptor J8N08_09050 PF00117 Glutamine amidotransferase class-I J8N08_09050 PF04715 Anthranilate synthase component I, N terminal region J8N08_09050 PF00425 chorismate binding enzyme J8N08_09055 PF01966 HD domain J8N08_09055 PF11871 Domain of unknown function (DUF3391) J8N08_09060 PF13382 Adenine deaminase C-terminal domain J8N08_09060 PF01979 Amidohydrolase family J8N08_09065 PF00583 Acetyltransferase (GNAT) family J8N08_09070 PF00128 Alpha amylase, catalytic domain J8N08_09075 PF00294 pfkB family carbohydrate kinase J8N08_09090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal J8N08_09090 PF01926 50S ribosome-binding GTPase J8N08_09110 PF05992 SbmA/BacA-like family J8N08_09120 PF00557 Metallopeptidase family M24 J8N08_09135 PF00111 2Fe-2S iron-sulfur cluster binding domain J8N08_09135 PF01799 [2Fe-2S] binding domain J8N08_09140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J8N08_09140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J8N08_09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_09150 PF03466 LysR substrate binding domain J8N08_09165 PF01979 Amidohydrolase family J8N08_09180 PF01070 FMN-dependent dehydrogenase J8N08_09185 PF00893 Small Multidrug Resistance protein J8N08_09190 PF00440 Bacterial regulatory proteins, tetR family J8N08_09190 PF17932 Tetracyclin repressor-like, C-terminal domain J8N08_09195 PF00768 D-alanyl-D-alanine carboxypeptidase J8N08_09195 PF07943 Penicillin-binding protein 5, C-terminal domain J8N08_09205 PF00576 HIUase/Transthyretin family J8N08_09210 PF04115 Ureidoglycolate lyase J8N08_09225 PF09349 OHCU decarboxylase J8N08_09225 PF01014 Uricase J8N08_09235 PF06299 Protein of unknown function (DUF1045) J8N08_09240 PF01266 FAD dependent oxidoreductase J8N08_09245 PF01266 FAD dependent oxidoreductase J8N08_09245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase J8N08_09250 PF00072 Response regulator receiver domain J8N08_09250 PF00672 HAMP domain J8N08_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_09250 PF00512 His Kinase A (phospho-acceptor) domain J8N08_09250 PF01627 Hpt domain J8N08_09250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) J8N08_09255 PF00270 DEAD/DEAH box helicase J8N08_09255 PF00271 Helicase conserved C-terminal domain J8N08_09265 PF07681 DoxX J8N08_09270 PF01476 LysM domain J8N08_09270 PF03734 L,D-transpeptidase catalytic domain J8N08_09280 PF14403 Circularly permuted ATP-grasp type 2 J8N08_09285 PF04168 A predicted alpha-helical domain with a conserved ER motif. J8N08_09285 PF14403 Circularly permuted ATP-grasp type 2 J8N08_09290 PF08379 Bacterial transglutaminase-like N-terminal region J8N08_09290 PF01841 Transglutaminase-like superfamily J8N08_09310 PF00300 Histidine phosphatase superfamily (branch 1) J8N08_09320 PF02653 Branched-chain amino acid transport system / permease component J8N08_09325 PF00005 ABC transporter J8N08_09330 PF13407 Periplasmic binding protein domain J8N08_09335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_09335 PF03466 LysR substrate binding domain J8N08_09360 PF07690 Major Facilitator Superfamily J8N08_09370 PF02965 Vitamin B12 dependent methionine synthase, activation domain J8N08_09370 PF00809 Pterin binding enzyme J8N08_09370 PF02574 Homocysteine S-methyltransferase J8N08_09370 PF02310 B12 binding domain J8N08_09370 PF02607 B12 binding domain J8N08_09375 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_09380 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_09385 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_09390 PF00005 ABC transporter J8N08_09410 PF00331 Glycosyl hydrolase family 10 J8N08_09415 PF00535 Glycosyl transferase family 2 J8N08_09430 PF03808 Glycosyl transferase WecB/TagA/CpsF family J8N08_09445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J8N08_09445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J8N08_09445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J8N08_09445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J8N08_09450 PF01152 Bacterial-like globin J8N08_09470 PF08362 YcdC-like protein, C-terminal region J8N08_09470 PF00440 Bacterial regulatory proteins, tetR family J8N08_09475 PF01546 Peptidase family M20/M25/M40 J8N08_09475 PF07687 Peptidase dimerisation domain J8N08_09480 PF01979 Amidohydrolase family J8N08_09485 PF00293 NUDIX domain J8N08_09490 PF00005 ABC transporter J8N08_09495 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_09500 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_09515 PF00873 AcrB/AcrD/AcrF family J8N08_09525 PF00753 Metallo-beta-lactamase superfamily J8N08_09530 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8N08_09535 PF01730 UreF J8N08_09540 PF05194 UreE urease accessory protein, C-terminal domain J8N08_09540 PF02814 UreE urease accessory protein, N-terminal domain J8N08_09545 PF08534 Redoxin J8N08_09555 PF00449 Urease alpha-subunit, N-terminal domain J8N08_09555 PF01979 Amidohydrolase family J8N08_09565 PF07007 Lysozyme inhibitor LprI J8N08_09575 PF00699 Urease beta subunit J8N08_09580 PF06906 Protein of unknown function (DUF1272) J8N08_09585 PF00547 Urease, gamma subunit J8N08_09590 PF01774 UreD urease accessory protein J8N08_09600 PF00005 ABC transporter J8N08_09605 PF00005 ABC transporter J8N08_09605 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_09615 PF02653 Branched-chain amino acid transport system / permease component J8N08_09625 PF10931 Protein of unknown function (DUF2735) J8N08_09630 PF00120 Glutamine synthetase, catalytic domain J8N08_09630 PF03951 Glutamine synthetase, beta-Grasp domain J8N08_09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_09640 PF00512 His Kinase A (phospho-acceptor) domain J8N08_09640 PF18415 Histidine kinase receptor ArcB trans-membrane domain J8N08_09640 PF01627 Hpt domain J8N08_09640 PF00989 PAS fold J8N08_09640 PF00072 Response regulator receiver domain J8N08_09645 PF00072 Response regulator receiver domain J8N08_09655 PF13458 Periplasmic binding protein J8N08_09665 PF00005 ABC transporter J8N08_09670 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_09670 PF00005 ABC transporter J8N08_09675 PF02653 Branched-chain amino acid transport system / permease component J8N08_09675 PF11862 Domain of unknown function (DUF3382) J8N08_09680 PF02653 Branched-chain amino acid transport system / permease component J8N08_09685 PF00459 Inositol monophosphatase family J8N08_09715 PF00072 Response regulator receiver domain J8N08_09715 PF00486 Transcriptional regulatory protein, C terminal J8N08_09730 PF10090 Histidine phosphotransferase C-terminal domain J8N08_09745 PF00588 SpoU rRNA Methylase family J8N08_09755 PF00849 RNA pseudouridylate synthase J8N08_09770 PF04545 Sigma-70, region 4 J8N08_09770 PF04542 Sigma-70 region 2 J8N08_09770 PF00140 Sigma-70 factor, region 1.2 J8N08_09780 PF00709 Adenylosuccinate synthetase J8N08_09805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_09815 PF03167 Uracil DNA glycosylase superfamily J8N08_09820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_09825 PF04304 Protein of unknown function (DUF454) J8N08_09830 PF00005 ABC transporter J8N08_09835 PF01032 FecCD transport family J8N08_09840 PF01497 Periplasmic binding protein J8N08_09850 PF06228 Haem utilisation ChuX/HutX J8N08_09860 PF00551 Formyl transferase J8N08_09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_09870 PF00672 HAMP domain J8N08_09870 PF00512 His Kinase A (phospho-acceptor) domain J8N08_09875 PF00486 Transcriptional regulatory protein, C terminal J8N08_09875 PF00072 Response regulator receiver domain J8N08_09885 PF03401 Tripartite tricarboxylate transporter family receptor J8N08_09895 PF01970 Tripartite tricarboxylate transporter TctA family J8N08_09910 PF01032 FecCD transport family J8N08_09915 PF01032 FecCD transport family J8N08_09920 PF00005 ABC transporter J8N08_09925 PF00210 Ferritin-like domain J8N08_09940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_09940 PF00672 HAMP domain J8N08_09945 PF00248 Aldo/keto reductase family J8N08_09950 PF07690 Major Facilitator Superfamily J8N08_09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_09955 PF03466 LysR substrate binding domain J8N08_09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_09960 PF03466 LysR substrate binding domain J8N08_09965 PF07859 alpha/beta hydrolase fold J8N08_09970 PF13533 Biotin-lipoyl like J8N08_09975 PF00873 AcrB/AcrD/AcrF family J8N08_09990 PF13091 PLD-like domain J8N08_09990 PF13396 Phospholipase_D-nuclease N-terminal J8N08_09995 PF08543 Phosphomethylpyrimidine kinase J8N08_10000 PF00484 Carbonic anhydrase J8N08_10010 PF02774 Semialdehyde dehydrogenase, dimerisation domain J8N08_10010 PF01118 Semialdehyde dehydrogenase, NAD binding domain J8N08_10015 PF00083 Sugar (and other) transporter J8N08_10020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain J8N08_10020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain J8N08_10020 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch J8N08_10025 PF02233 NAD(P) transhydrogenase beta subunit J8N08_10030 PF01613 Flavin reductase like domain J8N08_10035 PF00881 Nitroreductase family J8N08_10040 PF00561 alpha/beta hydrolase fold J8N08_10045 PF01042 Endoribonuclease L-PSP J8N08_10050 PF00857 Isochorismatase family J8N08_10055 PF00296 Luciferase-like monooxygenase J8N08_10060 PF01126 Heme oxygenase J8N08_10065 PF00701 Dihydrodipicolinate synthetase family J8N08_10070 PF00392 Bacterial regulatory proteins, gntR family J8N08_10070 PF07729 FCD domain J8N08_10080 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10085 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10090 PF03459 TOBE domain J8N08_10090 PF17912 MalK OB fold domain J8N08_10090 PF00005 ABC transporter J8N08_10095 PF00294 pfkB family carbohydrate kinase J8N08_10100 PF03576 Peptidase family S58 J8N08_10105 PF01063 Amino-transferase class IV J8N08_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_10110 PF03466 LysR substrate binding domain J8N08_10120 PF00005 ABC transporter J8N08_10120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_10125 PF00005 ABC transporter J8N08_10125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_10130 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_10130 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10135 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_10145 PF01244 Membrane dipeptidase (Peptidase family M19) J8N08_10155 PF03706 Lysylphosphatidylglycerol synthase TM region J8N08_10155 PF09924 Uncharacterised conserved protein (DUF2156) J8N08_10175 PF07690 Major Facilitator Superfamily J8N08_10185 PF00775 Dioxygenase J8N08_10185 PF04444 Catechol dioxygenase N terminus J8N08_10190 PF00465 Iron-containing alcohol dehydrogenase J8N08_10195 PF04909 Amidohydrolase J8N08_10200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J8N08_10205 PF01613 Flavin reductase like domain J8N08_10220 PF00512 His Kinase A (phospho-acceptor) domain J8N08_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_10225 PF00486 Transcriptional regulatory protein, C terminal J8N08_10225 PF00072 Response regulator receiver domain J8N08_10235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8N08_10240 PF00005 ABC transporter J8N08_10240 PF08402 TOBE domain J8N08_10245 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10260 PF00072 Response regulator receiver domain J8N08_10260 PF00486 Transcriptional regulatory protein, C terminal J8N08_10265 PF00072 Response regulator receiver domain J8N08_10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_10265 PF13426 PAS domain J8N08_10275 PF13614 AAA domain J8N08_10280 PF01339 CheB methylesterase J8N08_10280 PF00072 Response regulator receiver domain J8N08_10285 PF01739 CheR methyltransferase, SAM binding domain J8N08_10285 PF03705 CheR methyltransferase, all-alpha domain J8N08_10290 PF01584 CheW-like domain J8N08_10295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_10295 PF00672 HAMP domain J8N08_10295 PF02203 Tar ligand binding domain homologue J8N08_10300 PF01584 CheW-like domain J8N08_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_10305 PF02895 Signal transducing histidine kinase, homodimeric domain J8N08_10305 PF09078 CheY binding J8N08_10305 PF01584 CheW-like domain J8N08_10305 PF01627 Hpt domain J8N08_10310 PF00072 Response regulator receiver domain J8N08_10320 PF00072 Response regulator receiver domain J8N08_10325 PF00296 Luciferase-like monooxygenase J8N08_10330 PF01613 Flavin reductase like domain J8N08_10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_10335 PF03466 LysR substrate binding domain J8N08_10340 PF00355 Rieske [2Fe-2S] domain J8N08_10345 PF00005 ABC transporter J8N08_10350 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_10355 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10360 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10365 PF02913 FAD linked oxidases, C-terminal domain J8N08_10365 PF01565 FAD binding domain J8N08_10370 PF00155 Aminotransferase class I and II J8N08_10375 PF00970 Oxidoreductase FAD-binding domain J8N08_10375 PF00042 Globin J8N08_10375 PF00175 Oxidoreductase NAD-binding domain J8N08_10410 PF01259 SAICAR synthetase J8N08_10420 PF00529 HlyD membrane-fusion protein of T1SS J8N08_10420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8N08_10425 PF00873 AcrB/AcrD/AcrF family J8N08_10430 PF02321 Outer membrane efflux protein J8N08_10435 PF08207 Elongation factor P (EF-P) KOW-like domain J8N08_10435 PF09285 Elongation factor P, C-terminal J8N08_10435 PF01132 Elongation factor P (EF-P) OB domain J8N08_10440 PF00152 tRNA synthetases class II (D, K and N) J8N08_10445 PF04055 Radical SAM superfamily J8N08_10445 PF12544 Lysine-2,3-aminomutase J8N08_10460 PF03466 LysR substrate binding domain J8N08_10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_10465 PF01266 FAD dependent oxidoreductase J8N08_10475 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10480 PF03459 TOBE domain J8N08_10480 PF00005 ABC transporter J8N08_10490 PF03576 Peptidase family S58 J8N08_10495 PF05690 Thiazole biosynthesis protein ThiG J8N08_10505 PF01266 FAD dependent oxidoreductase J8N08_10510 PF01964 Radical SAM ThiC family J8N08_10510 PF13667 ThiC-associated domain J8N08_10515 PF00550 Phosphopantetheine attachment site J8N08_10545 PF00664 ABC transporter transmembrane region J8N08_10545 PF00005 ABC transporter J8N08_10550 PF00027 Cyclic nucleotide-binding domain J8N08_10550 PF13545 Crp-like helix-turn-helix domain J8N08_10560 PF00211 Adenylate and Guanylate cyclase catalytic domain J8N08_10560 PF00672 HAMP domain J8N08_10570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J8N08_10570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J8N08_10570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J8N08_10575 PF13439 Glycosyltransferase Family 4 J8N08_10575 PF00534 Glycosyl transferases group 1 J8N08_10590 PF00005 ABC transporter J8N08_10590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_10595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_10600 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10605 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10605 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_10615 PF00534 Glycosyl transferases group 1 J8N08_10615 PF13439 Glycosyltransferase Family 4 J8N08_10620 PF03033 Glycosyltransferase family 28 N-terminal domain J8N08_10620 PF04101 Glycosyltransferase family 28 C-terminal domain J8N08_10625 PF03932 CutC family J8N08_10640 PF02838 Glycosyl hydrolase family 20, domain 2 J8N08_10640 PF00728 Glycosyl hydrolase family 20, catalytic domain J8N08_10650 PF01380 SIS domain J8N08_10650 PF01418 Helix-turn-helix domain, rpiR family J8N08_10660 PF00005 ABC transporter J8N08_10660 PF17912 MalK OB fold domain J8N08_10665 PF01547 Bacterial extracellular solute-binding protein J8N08_10670 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10675 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_10685 PF07702 UTRA domain J8N08_10685 PF00392 Bacterial regulatory proteins, gntR family J8N08_10690 PF01380 SIS domain J8N08_10695 PF01979 Amidohydrolase family J8N08_10700 PF00480 ROK family J8N08_10705 PF01494 FAD binding domain J8N08_10710 PF01569 PAP2 superfamily J8N08_10715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain J8N08_10715 PF13288 DXP reductoisomerase C-terminal domain J8N08_10715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase J8N08_10720 PF00155 Aminotransferase class I and II J8N08_10730 PF17243 POTRA domain TamA domain 1 J8N08_10730 PF07244 Surface antigen variable number repeat J8N08_10730 PF01103 Surface antigen J8N08_10740 PF01584 CheW-like domain J8N08_10745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_10745 PF13426 PAS domain J8N08_10745 PF08447 PAS fold J8N08_10750 PF02634 FdhD/NarQ family J8N08_10755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain J8N08_10760 PF02874 ATP synthase alpha/beta family, beta-barrel domain J8N08_10760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8N08_10765 PF00231 ATP synthase J8N08_10770 PF00306 ATP synthase alpha/beta chain, C terminal domain J8N08_10770 PF02874 ATP synthase alpha/beta family, beta-barrel domain J8N08_10770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8N08_10775 PF00213 ATP synthase delta (OSCP) subunit J8N08_10785 PF00270 DEAD/DEAH box helicase J8N08_10785 PF17764 3′ DNA-binding domain (3′BD) J8N08_10785 PF18074 Primosomal protein N C-terminal domain J8N08_10785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain J8N08_10790 PF02899 Phage integrase, N-terminal SAM-like domain J8N08_10790 PF00589 Phage integrase family J8N08_10810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain J8N08_10810 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_10815 PF01810 LysE type translocator J8N08_10825 PF02817 e3 binding domain J8N08_10825 PF00364 Biotin-requiring enzyme J8N08_10825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J8N08_10830 PF02779 Transketolase, pyrimidine binding domain J8N08_10830 PF16870 2-oxoglutarate dehydrogenase C-terminal J8N08_10830 PF00676 Dehydrogenase E1 component J8N08_10830 PF16078 2-oxoglutarate dehydrogenase N-terminus J8N08_10835 PF02629 CoA binding domain J8N08_10835 PF00549 CoA-ligase J8N08_10840 PF08442 ATP-grasp domain J8N08_10840 PF00549 CoA-ligase J8N08_10845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain J8N08_10845 PF00056 lactate/malate dehydrogenase, NAD binding domain J8N08_10850 PF03969 AFG1-like ATPase J8N08_10855 PF02974 Protease inhibitor Inh J8N08_10860 PF13085 2Fe-2S iron-sulfur cluster binding domain J8N08_10860 PF13237 4Fe-4S dicluster domain J8N08_10865 PF00890 FAD binding domain J8N08_10865 PF02910 Fumarate reductase flavoprotein C-term J8N08_10875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit J8N08_10900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus J8N08_10900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus J8N08_10905 PF00814 Glycoprotease family J8N08_10910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain J8N08_10910 PF03900 Porphobilinogen deaminase, C-terminal domain J8N08_10935 PF00117 Glutamine amidotransferase class-I J8N08_10945 PF02325 YGGT family J8N08_10950 PF02594 Uncharacterised ACR, YggU family COG1872 J8N08_10955 PF00719 Inorganic pyrophosphatase J8N08_10965 PF00009 Elongation factor Tu GTP binding domain J8N08_10965 PF00679 Elongation factor G C-terminus J8N08_10965 PF03144 Elongation factor Tu domain 2 J8N08_10970 PF01432 Peptidase family M3 J8N08_10980 PF01047 MarR family J8N08_10985 PF07690 Major Facilitator Superfamily J8N08_10990 PF00764 Arginosuccinate synthase J8N08_10995 PF00106 short chain dehydrogenase J8N08_11000 PF01810 LysE type translocator J8N08_11005 PF00005 ABC transporter J8N08_11010 PF02653 Branched-chain amino acid transport system / permease component J8N08_11020 PF04055 Radical SAM superfamily J8N08_11035 PF01329 Pterin 4 alpha carbinolamine dehydratase J8N08_11040 PF01451 Low molecular weight phosphotyrosine protein phosphatase J8N08_11045 PF02834 LigT like Phosphoesterase J8N08_11050 PF13472 GDSL-like Lipase/Acylhydrolase family J8N08_11055 PF00005 ABC transporter J8N08_11065 PF01027 Inhibitor of apoptosis-promoting Bax1 J8N08_11080 PF00330 Aconitase family (aconitate hydratase) J8N08_11080 PF00694 Aconitase C-terminal domain J8N08_11085 PF00005 ABC transporter J8N08_11090 PF03379 CcmB protein J8N08_11095 PF01578 Cytochrome C assembly protein J8N08_11105 PF08534 Redoxin J8N08_11110 PF00990 Diguanylate cyclase, GGDEF domain J8N08_11115 PF10755 Protein of unknown function (DUF2585) J8N08_11120 PF04279 Intracellular septation protein A J8N08_11125 PF00448 SRP54-type protein, GTPase domain J8N08_11125 PF02881 SRP54-type protein, helical bundle domain J8N08_11130 PF04055 Radical SAM superfamily J8N08_11130 PF00919 Uncharacterized protein family UPF0004 J8N08_11135 PF01678 Diaminopimelate epimerase J8N08_11140 PF12706 Beta-lactamase superfamily domain J8N08_11145 PF00448 SRP54-type protein, GTPase domain J8N08_11145 PF02881 SRP54-type protein, helical bundle domain J8N08_11145 PF02978 Signal peptide binding domain J8N08_11150 PF01817 Chorismate mutase type II J8N08_11150 PF02153 Prephenate dehydrogenase J8N08_11155 PF00886 Ribosomal protein S16 J8N08_11160 PF05239 PRC-barrel domain J8N08_11160 PF01782 RimM N-terminal domain J8N08_11165 PF01746 tRNA (Guanine-1)-methyltransferase J8N08_11175 PF01245 Ribosomal protein L19 J8N08_11180 PF00664 ABC transporter transmembrane region J8N08_11180 PF00005 ABC transporter J8N08_11185 PF00529 HlyD membrane-fusion protein of T1SS J8N08_11185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8N08_11195 PF07690 Major Facilitator Superfamily J8N08_11200 PF00330 Aconitase family (aconitate hydratase) J8N08_11215 PF01435 Peptidase family M48 J8N08_11220 PF00005 ABC transporter J8N08_11225 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_11230 PF01547 Bacterial extracellular solute-binding protein J8N08_11240 PF00005 ABC transporter J8N08_11240 PF16326 ABC transporter C-terminal domain J8N08_11250 PF04204 Homoserine O-succinyltransferase J8N08_11255 PF01263 Aldose 1-epimerase J8N08_11260 PF00912 Transglycosylase J8N08_11265 PF00348 Polyprenyl synthetase J8N08_11270 PF13488 Glycine zipper J8N08_11270 PF00691 OmpA family J8N08_11275 PF04551 GcpE protein J8N08_11280 PF07690 Major Facilitator Superfamily J8N08_11285 PF00455 DeoR C terminal sensor domain J8N08_11285 PF08220 DeoR-like helix-turn-helix domain J8N08_11290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_11290 PF00682 HMGL-like J8N08_11290 PF02436 Conserved carboxylase domain J8N08_11290 PF00364 Biotin-requiring enzyme J8N08_11290 PF02785 Biotin carboxylase C-terminal domain J8N08_11290 PF00289 Biotin carboxylase, N-terminal domain J8N08_11295 PF00196 Bacterial regulatory proteins, luxR family J8N08_11295 PF00072 Response regulator receiver domain J8N08_11300 PF00664 ABC transporter transmembrane region J8N08_11300 PF00005 ABC transporter J8N08_11305 PF06165 Glycosyltransferase family 36 J8N08_11305 PF10091 Putative glucoamylase J8N08_11305 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain J8N08_11310 PF07687 Peptidase dimerisation domain J8N08_11310 PF01546 Peptidase family M20/M25/M40 J8N08_11315 PF01266 FAD dependent oxidoreductase J8N08_11320 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_11325 PF00920 Dehydratase family J8N08_11330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_11330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8N08_11335 PF01370 NAD dependent epimerase/dehydratase family J8N08_11340 PF02913 FAD linked oxidases, C-terminal domain J8N08_11340 PF01565 FAD binding domain J8N08_11345 PF00392 Bacterial regulatory proteins, gntR family J8N08_11345 PF07729 FCD domain J8N08_11355 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J8N08_11360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_11365 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_11370 PF16177 Acetyl-coenzyme A synthetase N-terminus J8N08_11370 PF00501 AMP-binding enzyme J8N08_11370 PF13193 AMP-binding enzyme C-terminal domain J8N08_11380 PF01168 Alanine racemase, N-terminal domain J8N08_11385 PF08264 Anticodon-binding domain of tRNA J8N08_11385 PF13603 Leucyl-tRNA synthetase, Domain 2 J8N08_11385 PF00133 tRNA synthetases class I (I, L, M and V) J8N08_11400 PF11953 Domain of unknown function (DUF3470) J8N08_11400 PF00037 4Fe-4S binding domain J8N08_11405 PF01479 S4 domain J8N08_11405 PF00579 tRNA synthetases class I (W and Y) J8N08_11415 PF01494 FAD binding domain J8N08_11425 PF00543 Nitrogen regulatory protein P-II J8N08_11430 PF00909 Ammonium Transporter Family J8N08_11435 PF01580 FtsK/SpoIIIE family J8N08_11435 PF09397 Ftsk gamma domain J8N08_11435 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J8N08_11435 PF17854 FtsK alpha domain J8N08_11440 PF03548 Outer membrane lipoprotein carrier protein LolA J8N08_11455 PF00072 Response regulator receiver domain J8N08_11455 PF00486 Transcriptional regulatory protein, C terminal J8N08_11465 PF02559 CarD-like/TRCF domain J8N08_11470 PF05088 Bacterial NAD-glutamate dehydrogenase J8N08_11475 PF11700 Vacuole effluxer Atg22 like J8N08_11480 PF05233 PHB accumulation regulatory domain J8N08_11480 PF07879 PHB/PHA accumulation regulator DNA-binding domain J8N08_11485 PF02803 Thiolase, C-terminal domain J8N08_11485 PF00108 Thiolase, N-terminal domain J8N08_11500 PF00210 Ferritin-like domain J8N08_11505 PF00293 NUDIX domain J8N08_11515 PF03572 Peptidase family S41 J8N08_11515 PF13180 PDZ domain J8N08_11525 PF02590 Predicted SPOUT methyltransferase J8N08_11535 PF01467 Cytidylyltransferase-like J8N08_11540 PF00171 Aldehyde dehydrogenase family J8N08_11545 PF00696 Amino acid kinase family J8N08_11545 PF01472 PUA domain J8N08_11550 PF01018 GTP1/OBG J8N08_11550 PF01926 50S ribosome-binding GTPase J8N08_11555 PF13302 Acetyltransferase (GNAT) domain J8N08_11565 PF01016 Ribosomal L27 protein J8N08_11570 PF00829 Ribosomal prokaryotic L21 protein J8N08_11585 PF03328 HpcH/HpaI aldolase/citrate lyase family J8N08_11595 PF00694 Aconitase C-terminal domain J8N08_11600 PF00180 Isocitrate/isopropylmalate dehydrogenase J8N08_11605 PF03150 Di-haem cytochrome c peroxidase J8N08_11610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J8N08_11610 PF07685 CobB/CobQ-like glutamine amidotransferase domain J8N08_11615 PF14824 Sirohaem biosynthesis protein central J8N08_11615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_11615 PF10414 Sirohaem synthase dimerisation region J8N08_11620 PF01888 CbiD J8N08_11625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_11635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_11640 PF02571 Precorrin-6x reductase CbiJ/CobK J8N08_11645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_11650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_11655 PF02570 Precorrin-8X methylmutase J8N08_11660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J8N08_11665 PF02514 CobN/Magnesium Chelatase J8N08_11670 PF07683 Cobalamin synthesis protein cobW C-terminal domain J8N08_11670 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8N08_11680 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP J8N08_11680 PF12557 Cob(I)alamin adenosyltransferase N terminal J8N08_11685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J8N08_11685 PF07685 CobB/CobQ-like glutamine amidotransferase domain J8N08_11690 PF03186 CobD/Cbib protein J8N08_11695 PF00155 Aminotransferase class I and II J8N08_11700 PF13378 Enolase C-terminal domain-like J8N08_11700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_11705 PF05336 L-rhamnose mutarotase J8N08_11715 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_11715 PF00107 Zinc-binding dehydrogenase J8N08_11725 PF00248 Aldo/keto reductase family J8N08_11735 PF02653 Branched-chain amino acid transport system / permease component J8N08_11740 PF00005 ABC transporter J8N08_11745 PF07729 FCD domain J8N08_11745 PF00392 Bacterial regulatory proteins, gntR family J8N08_11750 PF08666 SAF domain J8N08_11750 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus J8N08_11755 PF02142 MGS-like domain J8N08_11755 PF01808 AICARFT/IMPCHase bienzyme J8N08_11765 PF01029 NusB family J8N08_11765 PF01189 16S rRNA methyltransferase RsmB/F J8N08_11770 PF01435 Peptidase family M48 J8N08_11780 PF17762 HTH domain found in ParB protein J8N08_11780 PF02195 ParB-like nuclease domain J8N08_11785 PF13614 AAA domain J8N08_11790 PF02527 rRNA small subunit methyltransferase G J8N08_11795 PF01134 Glucose inhibited division protein A J8N08_11795 PF13932 GidA associated domain J8N08_11800 PF10396 GTP-binding protein TrmE N-terminus J8N08_11800 PF01926 50S ribosome-binding GTPase J8N08_11800 PF12631 MnmE helical domain J8N08_11805 PF07498 Rho termination factor, N-terminal domain J8N08_11805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain J8N08_11805 PF07497 Rho termination factor, RNA-binding domain J8N08_11810 PF03653 Uncharacterised protein family (UPF0093) J8N08_11815 PF01208 Uroporphyrinogen decarboxylase (URO-D) J8N08_11820 PF03618 Kinase/pyrophosphorylase J8N08_11825 PF02545 Maf-like protein J8N08_11830 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J8N08_11830 PF01488 Shikimate / quinate 5-dehydrogenase J8N08_11830 PF08501 Shikimate dehydrogenase substrate binding domain J8N08_11835 PF01121 Dephospho-CoA kinase J8N08_11840 PF00929 Exonuclease J8N08_11845 PF02556 Preprotein translocase subunit SecB J8N08_11850 PF04186 FxsA cytoplasmic membrane protein J8N08_11860 PF06725 3D domain J8N08_11860 PF03562 MltA specific insert domain J8N08_11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_11875 PF01751 Toprim domain J8N08_11875 PF00986 DNA gyrase B subunit, carboxyl terminus J8N08_11875 PF00204 DNA gyrase B J8N08_11885 PF01557 Fumarylacetoacetate (FAA) hydrolase family J8N08_11900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase J8N08_11905 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_11910 PF00290 Tryptophan synthase alpha chain J8N08_11915 PF01039 Carboxyl transferase domain J8N08_11920 PF08245 Mur ligase middle domain J8N08_11925 PF00085 Thioredoxin J8N08_11930 PF13361 UvrD-like helicase C-terminal domain J8N08_11930 PF00580 UvrD/REP helicase N-terminal domain J8N08_11930 PF12705 PD-(D/E)XK nuclease superfamily J8N08_11940 PF12804 MobA-like NTP transferase domain J8N08_11945 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE J8N08_11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_11950 PF00512 His Kinase A (phospho-acceptor) domain J8N08_11955 PF05221 S-adenosyl-L-homocysteine hydrolase J8N08_11955 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain J8N08_11960 PF00381 PTS HPr component phosphorylation site J8N08_11965 PF03610 PTS system fructose IIA component J8N08_11965 PF03830 PTS system sorbose subfamily IIB component J8N08_11970 PF02603 HPr Serine kinase N terminus J8N08_11970 PF07475 HPr Serine kinase C-terminal domain J8N08_11975 PF00672 HAMP domain J8N08_11975 PF13755 Sensor N-terminal transmembrane domain J8N08_11975 PF13756 Stimulus-sensing domain J8N08_11975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_11975 PF00512 His Kinase A (phospho-acceptor) domain J8N08_11980 PF00486 Transcriptional regulatory protein, C terminal J8N08_11980 PF00072 Response regulator receiver domain J8N08_11985 PF01293 Phosphoenolpyruvate carboxykinase J8N08_11990 PF00472 RF-1 domain J8N08_11995 PF04972 BON domain J8N08_11995 PF01476 LysM domain J8N08_12000 PF00485 Phosphoribulokinase / Uridine kinase family J8N08_12005 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase J8N08_12010 PF00977 Histidine biosynthesis protein J8N08_12015 PF00977 Histidine biosynthesis protein J8N08_12020 PF00117 Glutamine amidotransferase class-I J8N08_12030 PF00475 Imidazoleglycerol-phosphate dehydratase J8N08_12035 PF00227 Proteasome subunit J8N08_12040 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_12040 PF07724 AAA domain (Cdc48 subfamily) J8N08_12040 PF10431 C-terminal, D2-small domain, of ClpB protein J8N08_12050 PF01274 Malate synthase J8N08_12065 PF00072 Response regulator receiver domain J8N08_12070 PF00512 His Kinase A (phospho-acceptor) domain J8N08_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_12075 PF00271 Helicase conserved C-terminal domain J8N08_12075 PF08482 ATP-dependent helicase C-terminal J8N08_12075 PF04408 Helicase associated domain (HA2) J8N08_12075 PF00270 DEAD/DEAH box helicase J8N08_12110 PF00570 HRDC domain J8N08_12110 PF09382 RQC domain J8N08_12110 PF16124 RecQ zinc-binding J8N08_12110 PF00271 Helicase conserved C-terminal domain J8N08_12110 PF00270 DEAD/DEAH box helicase J8N08_12115 PF00480 ROK family J8N08_12120 PF13407 Periplasmic binding protein domain J8N08_12125 PF02653 Branched-chain amino acid transport system / permease component J8N08_12130 PF00005 ABC transporter J8N08_12135 PF00485 Phosphoribulokinase / Uridine kinase family J8N08_12140 PF00462 Glutaredoxin J8N08_12145 PF07972 NrdI Flavodoxin like J8N08_12150 PF08343 Ribonucleotide reductase N-terminal J8N08_12150 PF02867 Ribonucleotide reductase, barrel domain J8N08_12150 PF00317 Ribonucleotide reductase, all-alpha domain J8N08_12155 PF00268 Ribonucleotide reductase, small chain J8N08_12165 PF02463 RecF/RecN/SMC N terminal domain J8N08_12170 PF00581 Rhodanese-like domain J8N08_12170 PF00899 ThiF family J8N08_12180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8N08_12180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_12190 PF00294 pfkB family carbohydrate kinase J8N08_12200 PF05175 Methyltransferase small domain J8N08_12200 PF08468 Methyltransferase small domain N-terminal J8N08_12205 PF00575 S1 RNA binding domain J8N08_12205 PF03725 3' exoribonuclease family, domain 2 J8N08_12205 PF01138 3' exoribonuclease family, domain 1 J8N08_12205 PF00013 KH domain J8N08_12205 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain J8N08_12210 PF00312 Ribosomal protein S15 J8N08_12215 PF09157 Pseudouridine synthase II TruB, C-terminal J8N08_12215 PF01509 TruB family pseudouridylate synthase (N terminal domain) J8N08_12215 PF16198 tRNA pseudouridylate synthase B C-terminal domain J8N08_12220 PF02033 Ribosome-binding factor A J8N08_12225 PF03144 Elongation factor Tu domain 2 J8N08_12225 PF11987 Translation-initiation factor 2 J8N08_12225 PF04760 Translation initiation factor IF-2, N-terminal region J8N08_12225 PF08364 Bacterial translation initiation factor IF-2 associated region J8N08_12225 PF00009 Elongation factor Tu GTP binding domain J8N08_12235 PF13184 NusA-like KH domain J8N08_12235 PF08529 NusA N-terminal domain J8N08_12235 PF00575 S1 RNA binding domain J8N08_12240 PF02576 RimP N-terminal domain J8N08_12240 PF17384 RimP C-terminal SH3 domain J8N08_12245 PF05977 Transmembrane secretion effector J8N08_12250 PF13406 Transglycosylase SLT domain J8N08_12255 PF13662 Toprim domain J8N08_12255 PF02132 RecR protein J8N08_12265 PF02575 YbaB/EbfC DNA-binding family J8N08_12270 PF12170 DNA polymerase III tau subunit V interacting with alpha J8N08_12270 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding J8N08_12270 PF12169 DNA polymerase III subunits gamma and tau domain III J8N08_12285 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain J8N08_12285 PF00293 NUDIX domain J8N08_12285 PF09297 NADH pyrophosphatase zinc ribbon domain J8N08_12290 PF00800 Prephenate dehydratase J8N08_12290 PF01817 Chorismate mutase type II J8N08_12295 PF02348 Cytidylyltransferase J8N08_12300 PF00034 Cytochrome c J8N08_12305 PF02397 Bacterial sugar transferase J8N08_12310 PF00905 Penicillin binding protein transpeptidase domain J8N08_12310 PF00912 Transglycosylase J8N08_12315 PF04073 Aminoacyl-tRNA editing domain J8N08_12320 PF00313 'Cold-shock' DNA-binding domain J8N08_12325 PF07687 Peptidase dimerisation domain J8N08_12325 PF01546 Peptidase family M20/M25/M40 J8N08_12330 PF01047 MarR family J8N08_12335 PF01367 5'-3' exonuclease, C-terminal SAM fold J8N08_12335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain J8N08_12335 PF00476 DNA polymerase family A J8N08_12335 PF01612 3'-5' exonuclease J8N08_12345 PF01783 Ribosomal L32p protein family J8N08_12350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_12350 PF00512 His Kinase A (phospho-acceptor) domain J8N08_12350 PF02743 Cache domain J8N08_12355 PF02954 Bacterial regulatory protein, Fis family J8N08_12355 PF00072 Response regulator receiver domain J8N08_12355 PF00158 Sigma-54 interaction domain J8N08_12360 PF03401 Tripartite tricarboxylate transporter family receptor J8N08_12365 PF07331 Tripartite tricarboxylate transporter TctB family J8N08_12370 PF01970 Tripartite tricarboxylate transporter TctA family J8N08_12375 PF04102 SlyX J8N08_12385 PF00226 DnaJ domain J8N08_12385 PF01556 DnaJ C terminal domain J8N08_12385 PF00684 DnaJ central domain J8N08_12390 PF00012 Hsp70 protein J8N08_12405 PF01625 Peptide methionine sulfoxide reductase J8N08_12410 PF02608 ABC transporter substrate-binding protein PnrA-like J8N08_12415 PF00005 ABC transporter J8N08_12420 PF02653 Branched-chain amino acid transport system / permease component J8N08_12425 PF02653 Branched-chain amino acid transport system / permease component J8N08_12430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region J8N08_12435 PF01048 Phosphorylase superfamily J8N08_12440 PF01791 DeoC/LacD family aldolase J8N08_12445 PF00591 Glycosyl transferase family, a/b domain J8N08_12445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain J8N08_12445 PF02885 Glycosyl transferase family, helical bundle domain J8N08_12460 PF00962 Adenosine/AMP deaminase J8N08_12465 PF01676 Metalloenzyme superfamily J8N08_12480 PF03626 Prokaryotic Cytochrome C oxidase subunit IV J8N08_12485 PF00510 Cytochrome c oxidase subunit III J8N08_12490 PF00115 Cytochrome C and Quinol oxidase polypeptide I J8N08_12495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain J8N08_12495 PF06481 COX Aromatic Rich Motif J8N08_12500 PF00083 Sugar (and other) transporter J8N08_12500 PF07690 Major Facilitator Superfamily J8N08_12505 PF01645 Conserved region in glutamate synthase J8N08_12505 PF04898 Glutamate synthase central domain J8N08_12505 PF01493 GXGXG motif J8N08_12505 PF00310 Glutamine amidotransferases class-II J8N08_12510 PF00667 FAD binding domain J8N08_12510 PF00258 Flavodoxin J8N08_12510 PF00175 Oxidoreductase NAD-binding domain J8N08_12530 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_12530 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_12535 PF07977 FabA-like domain J8N08_12545 PF03458 UPF0126 domain J8N08_12555 PF06912 Protein of unknown function (DUF1275) J8N08_12565 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12570 PF00005 ABC transporter J8N08_12575 PF07702 UTRA domain J8N08_12575 PF00392 Bacterial regulatory proteins, gntR family J8N08_12580 PF01618 MotA/TolQ/ExbB proton channel family J8N08_12585 PF02472 Biopolymer transport protein ExbD/TolR J8N08_12595 PF02615 Malate/L-lactate dehydrogenase J8N08_12610 PF00625 Guanylate kinase J8N08_12615 PF07969 Amidohydrolase family J8N08_12620 PF06299 Protein of unknown function (DUF1045) J8N08_12625 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12630 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12640 PF00005 ABC transporter J8N08_12650 PF00005 ABC transporter J8N08_12655 PF00005 ABC transporter J8N08_12660 PF06007 Phosphonate metabolism protein PhnJ J8N08_12665 PF05861 Bacterial phosphonate metabolism protein (PhnI) J8N08_12670 PF05845 Bacterial phosphonate metabolism protein (PhnH) J8N08_12675 PF06754 Phosphonate metabolism protein PhnG J8N08_12680 PF07702 UTRA domain J8N08_12680 PF00392 Bacterial regulatory proteins, gntR family J8N08_12685 PF01113 Dihydrodipicolinate reductase, N-terminus J8N08_12685 PF05173 Dihydrodipicolinate reductase, C-terminus J8N08_12690 PF02685 Glucokinase J8N08_12695 PF02142 MGS-like domain J8N08_12700 PF03411 Penicillin-insensitive murein endopeptidase J8N08_12705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_12710 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12715 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12715 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_12720 PF00005 ABC transporter J8N08_12720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_12730 PF00120 Glutamine synthetase, catalytic domain J8N08_12735 PF01266 FAD dependent oxidoreductase J8N08_12745 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12750 PF00005 ABC transporter J8N08_12755 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_12760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J8N08_12770 PF02082 Transcriptional regulator J8N08_12775 PF13416 Bacterial extracellular solute-binding protein J8N08_12780 PF00171 Aldehyde dehydrogenase family J8N08_12790 PF03466 LysR substrate binding domain J8N08_12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_12795 PF00892 EamA-like transporter family J8N08_12810 PF00877 NlpC/P60 family J8N08_12820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family J8N08_12820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain J8N08_12825 PF00883 Cytosol aminopeptidase family, catalytic domain J8N08_12825 PF02789 Cytosol aminopeptidase family, N-terminal domain J8N08_12845 PF00437 Type II/IV secretion system protein J8N08_12860 PF13629 Pilus formation protein N terminal region J8N08_12860 PF04972 BON domain J8N08_12860 PF00263 Bacterial type II and III secretion system protein J8N08_12900 PF00117 Glutamine amidotransferase class-I J8N08_12905 PF07411 Domain of unknown function (DUF1508) J8N08_12915 PF00892 EamA-like transporter family J8N08_12920 PF00392 Bacterial regulatory proteins, gntR family J8N08_12920 PF00155 Aminotransferase class I and II J8N08_12950 PF00009 Elongation factor Tu GTP binding domain J8N08_12950 PF03144 Elongation factor Tu domain 2 J8N08_12950 PF06421 GTP-binding protein LepA C-terminus J8N08_12950 PF00679 Elongation factor G C-terminus J8N08_12955 PF00795 Carbon-nitrogen hydrolase J8N08_12985 PF02311 AraC-like ligand binding domain J8N08_12985 PF12833 Helix-turn-helix domain J8N08_12990 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_13015 PF05198 Translation initiation factor IF-3, N-terminal domain J8N08_13015 PF00707 Translation initiation factor IF-3, C-terminal domain J8N08_13020 PF01632 Ribosomal protein L35 J8N08_13025 PF00453 Ribosomal protein L20 J8N08_13035 PF01409 tRNA synthetases class II core domain (F) J8N08_13035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain J8N08_13040 PF03483 B3/4 domain J8N08_13040 PF03484 tRNA synthetase B5 domain J8N08_13040 PF01588 Putative tRNA binding domain J8N08_13040 PF03147 Ferredoxin-fold anticodon binding domain J8N08_13040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain J8N08_13045 PF00248 Aldo/keto reductase family J8N08_13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_13050 PF03466 LysR substrate binding domain J8N08_13060 PF00248 Aldo/keto reductase family J8N08_13065 PF12833 Helix-turn-helix domain J8N08_13065 PF01965 DJ-1/PfpI family J8N08_13075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_13075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_13090 PF02601 Exonuclease VII, large subunit J8N08_13090 PF13742 OB-fold nucleic acid binding domain J8N08_13095 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_13095 PF13378 Enolase C-terminal domain-like J8N08_13100 PF00392 Bacterial regulatory proteins, gntR family J8N08_13100 PF07729 FCD domain J8N08_13105 PF01047 MarR family J8N08_13110 PF00892 EamA-like transporter family J8N08_13115 PF02073 Thermophilic metalloprotease (M29) J8N08_13120 PF04073 Aminoacyl-tRNA editing domain J8N08_13125 PF03960 ArsC family J8N08_13140 PF00117 Glutamine amidotransferase class-I J8N08_13140 PF00958 GMP synthase C terminal domain J8N08_13155 PF03073 TspO/MBR family J8N08_13180 PF01029 NusB family J8N08_13180 PF01189 16S rRNA methyltransferase RsmB/F J8N08_13185 PF03330 Lytic transglycolase J8N08_13195 PF08331 Domain of unknown function (DUF1730) J8N08_13200 PF00043 Glutathione S-transferase, C-terminal domain J8N08_13200 PF13417 Glutathione S-transferase, N-terminal domain J8N08_13205 PF02673 Bacitracin resistance protein BacA J8N08_13220 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family J8N08_13230 PF13649 Methyltransferase domain J8N08_13235 PF00712 DNA polymerase III beta subunit, N-terminal domain J8N08_13235 PF02767 DNA polymerase III beta subunit, central domain J8N08_13235 PF02768 DNA polymerase III beta subunit, C-terminal domain J8N08_13240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_13245 PF02021 Uncharacterised protein family UPF0102 J8N08_13250 PF14602 Hexapeptide repeat of succinyl-transferase J8N08_13250 PF12464 Maltose acetyltransferase J8N08_13255 PF13416 Bacterial extracellular solute-binding protein J8N08_13260 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13265 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13270 PF00005 ABC transporter J8N08_13280 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J8N08_13280 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J8N08_13285 PF01078 Magnesium chelatase, subunit ChlI J8N08_13285 PF13335 Magnesium chelatase, subunit ChlI C-terminal J8N08_13290 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_13295 PF01810 LysE type translocator J8N08_13300 PF00692 dUTPase J8N08_13305 PF16658 Class II release factor RF3, C-terminal domain J8N08_13305 PF00009 Elongation factor Tu GTP binding domain J8N08_13305 PF03144 Elongation factor Tu domain 2 J8N08_13310 PF04127 DNA / pantothenate metabolism flavoprotein J8N08_13310 PF02441 Flavoprotein J8N08_13325 PF03109 ABC1 family J8N08_13330 PF01209 ubiE/COQ5 methyltransferase family J8N08_13335 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain J8N08_13335 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain J8N08_13335 PF06827 Zinc finger found in FPG and IleRS J8N08_13340 PF00378 Enoyl-CoA hydratase/isomerase J8N08_13345 PF01649 Ribosomal protein S20 J8N08_13360 PF04471 Restriction endonuclease J8N08_13360 PF14338 Mrr N-terminal domain J8N08_13375 PF01420 Type I restriction modification DNA specificity domain J8N08_13380 PF12161 HsdM N-terminal domain J8N08_13380 PF02384 N-6 DNA Methylase J8N08_13390 PF04851 Type III restriction enzyme, res subunit J8N08_13390 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) J8N08_13390 PF08463 EcoEI R protein C-terminal J8N08_13390 PF00271 Helicase conserved C-terminal domain J8N08_13410 PF02534 Type IV secretory system Conjugative DNA transfer J8N08_13430 PF17841 BID domain of Bartonella effector protein (Bep) J8N08_13430 PF03389 MobA/MobL family J8N08_13430 PF01443 Viral (Superfamily 1) RNA helicase J8N08_13435 PF13289 SIR2-like domain J8N08_13480 PF01726 LexA DNA binding domain J8N08_13480 PF00717 Peptidase S24-like J8N08_13500 PF07690 Major Facilitator Superfamily J8N08_13520 PF17991 Thioredoxin like C-terminal domain J8N08_13520 PF02683 Cytochrome C biogenesis protein transmembrane region J8N08_13520 PF00578 AhpC/TSA family J8N08_13530 PF00561 alpha/beta hydrolase fold J8N08_13535 PF00072 Response regulator receiver domain J8N08_13535 PF00486 Transcriptional regulatory protein, C terminal J8N08_13540 PF00672 HAMP domain J8N08_13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_13540 PF00512 His Kinase A (phospho-acceptor) domain J8N08_13545 PF02566 OsmC-like protein J8N08_13555 PF04199 Putative cyclase J8N08_13560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_13565 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_13565 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J8N08_13575 PF01614 Bacterial transcriptional regulator J8N08_13575 PF09339 IclR helix-turn-helix domain J8N08_13585 PF00501 AMP-binding enzyme J8N08_13585 PF13193 AMP-binding enzyme C-terminal domain J8N08_13610 PF01037 Lrp/AsnC ligand binding domain J8N08_13615 PF02538 Hydantoinase B/oxoprolinase J8N08_13620 PF05378 Hydantoinase/oxoprolinase N-terminal region J8N08_13620 PF01968 Hydantoinase/oxoprolinase J8N08_13640 PF05378 Hydantoinase/oxoprolinase N-terminal region J8N08_13640 PF01968 Hydantoinase/oxoprolinase J8N08_13645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_13650 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13655 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_13655 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_13660 PF00005 ABC transporter J8N08_13665 PF01266 FAD dependent oxidoreductase J8N08_13670 PF10415 Fumarase C C-terminus J8N08_13670 PF00206 Lyase J8N08_13675 PF01266 FAD dependent oxidoreductase J8N08_13680 PF00005 ABC transporter J8N08_13685 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13690 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13695 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_13705 PF00106 short chain dehydrogenase J8N08_13705 PF00300 Histidine phosphatase superfamily (branch 1) J8N08_13710 PF01266 FAD dependent oxidoreductase J8N08_13715 PF00392 Bacterial regulatory proteins, gntR family J8N08_13715 PF07729 FCD domain J8N08_13720 PF17912 MalK OB fold domain J8N08_13720 PF00005 ABC transporter J8N08_13725 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13730 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_13735 PF01547 Bacterial extracellular solute-binding protein J8N08_13740 PF16889 Heparinase II/III N-terminus J8N08_13740 PF07940 Heparinase II/III-like protein J8N08_13755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_13755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8N08_13765 PF13378 Enolase C-terminal domain-like J8N08_13765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_13775 PF00011 Hsp20/alpha crystallin family J8N08_13785 PF13439 Glycosyltransferase Family 4 J8N08_13785 PF00534 Glycosyl transferases group 1 J8N08_13790 PF00534 Glycosyl transferases group 1 J8N08_13790 PF13439 Glycosyltransferase Family 4 J8N08_13810 PF00953 Glycosyl transferase family 4 J8N08_13820 PF13439 Glycosyltransferase Family 4 J8N08_13820 PF00534 Glycosyl transferases group 1 J8N08_13840 PF01739 CheR methyltransferase, SAM binding domain J8N08_13840 PF08448 PAS fold J8N08_13840 PF01339 CheB methylesterase J8N08_13840 PF03705 CheR methyltransferase, all-alpha domain J8N08_13845 PF00072 Response regulator receiver domain J8N08_13845 PF00196 Bacterial regulatory proteins, luxR family J8N08_13850 PF00202 Aminotransferase class-III J8N08_13855 PF01370 NAD dependent epimerase/dehydratase family J8N08_13860 PF16221 winged helix-turn-helix J8N08_13860 PF16254 Domain of unknown function (DUF4910) J8N08_13860 PF09940 Domain of unknown function (DUF2172) J8N08_13865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J8N08_13870 PF08484 C-methyltransferase C-terminal domain J8N08_13870 PF08421 Putative zinc binding domain J8N08_13875 PF00483 Nucleotidyl transferase J8N08_13880 PF02585 GlcNAc-PI de-N-acetylase J8N08_13885 PF00072 Response regulator receiver domain J8N08_13885 PF00196 Bacterial regulatory proteins, luxR family J8N08_13905 PF13229 Right handed beta helix region J8N08_13905 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J8N08_13905 PF12708 Pectate lyase superfamily protein J8N08_13910 PF01370 NAD dependent epimerase/dehydratase family J8N08_13915 PF16363 GDP-mannose 4,6 dehydratase J8N08_13925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_13925 PF03466 LysR substrate binding domain J8N08_13930 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J8N08_13935 PF07690 Major Facilitator Superfamily J8N08_13950 PF06472 ABC transporter transmembrane region 2 J8N08_13950 PF00005 ABC transporter J8N08_13955 PF00990 Diguanylate cyclase, GGDEF domain J8N08_13965 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain J8N08_13965 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain J8N08_13970 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain J8N08_13970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_13975 PF00723 Glycosyl hydrolases family 15 J8N08_13975 PF09137 Glucodextranase, domain N J8N08_13980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_13980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_13985 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_13985 PF04324 BFD-like [2Fe-2S] binding domain J8N08_13990 PF01266 FAD dependent oxidoreductase J8N08_13990 PF04324 BFD-like [2Fe-2S] binding domain J8N08_13995 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J8N08_14000 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J8N08_14005 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14010 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14015 PF00005 ABC transporter J8N08_14015 PF08402 TOBE domain J8N08_14030 PF00795 Carbon-nitrogen hydrolase J8N08_14035 PF03466 LysR substrate binding domain J8N08_14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_14045 PF01266 FAD dependent oxidoreductase J8N08_14050 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14050 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_14055 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_14065 PF01266 FAD dependent oxidoreductase J8N08_14070 PF00300 Histidine phosphatase superfamily (branch 1) J8N08_14070 PF00106 short chain dehydrogenase J8N08_14080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_14080 PF00005 ABC transporter J8N08_14090 PF01037 Lrp/AsnC ligand binding domain J8N08_14095 PF01053 Cys/Met metabolism PLP-dependent enzyme J8N08_14105 PF07690 Major Facilitator Superfamily J8N08_14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_14110 PF03466 LysR substrate binding domain J8N08_14125 PF03466 LysR substrate binding domain J8N08_14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_14135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_14140 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14145 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_14145 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_14150 PF00005 ABC transporter J8N08_14155 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain J8N08_14155 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal J8N08_14155 PF02129 X-Pro dipeptidyl-peptidase (S15 family) J8N08_14160 PF00313 'Cold-shock' DNA-binding domain J8N08_14170 PF00158 Sigma-54 interaction domain J8N08_14170 PF00072 Response regulator receiver domain J8N08_14170 PF02954 Bacterial regulatory protein, Fis family J8N08_14175 PF00072 Response regulator receiver domain J8N08_14180 PF18415 Histidine kinase receptor ArcB trans-membrane domain J8N08_14180 PF00989 PAS fold J8N08_14180 PF00512 His Kinase A (phospho-acceptor) domain J8N08_14180 PF01627 Hpt domain J8N08_14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_14180 PF00072 Response regulator receiver domain J8N08_14185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_14185 PF00005 ABC transporter J8N08_14195 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_14195 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14200 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_14210 PF07729 FCD domain J8N08_14210 PF00392 Bacterial regulatory proteins, gntR family J8N08_14215 PF00144 Beta-lactamase J8N08_14220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_14220 PF03466 LysR substrate binding domain J8N08_14250 PF08281 Sigma-70, region 4 J8N08_14250 PF04542 Sigma-70 region 2 J8N08_14255 PF01177 Asp/Glu/Hydantoin racemase J8N08_14260 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14265 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14275 PF00005 ABC transporter J8N08_14275 PF08402 TOBE domain J8N08_14280 PF00005 ABC transporter J8N08_14285 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14290 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14295 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_14300 PF00392 Bacterial regulatory proteins, gntR family J8N08_14300 PF07729 FCD domain J8N08_14310 PF00743 Flavin-binding monooxygenase-like J8N08_14315 PF00107 Zinc-binding dehydrogenase J8N08_14315 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_14320 PF00158 Sigma-54 interaction domain J8N08_14320 PF02954 Bacterial regulatory protein, Fis family J8N08_14320 PF01590 GAF domain J8N08_14335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_14335 PF08447 PAS fold J8N08_14335 PF13426 PAS domain J8N08_14350 PF13416 Bacterial extracellular solute-binding protein J8N08_14355 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14360 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14365 PF17912 MalK OB fold domain J8N08_14365 PF00005 ABC transporter J8N08_14370 PF00296 Luciferase-like monooxygenase J8N08_14375 PF09084 NMT1/THI5 like J8N08_14380 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14385 PF00005 ABC transporter J8N08_14390 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14395 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14405 PF00005 ABC transporter J8N08_14405 PF17912 MalK OB fold domain J8N08_14410 PF06964 Alpha-L-arabinofuranosidase C-terminal domain J8N08_14425 PF00356 Bacterial regulatory proteins, lacI family J8N08_14435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8N08_14435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_14435 PF01842 ACT domain J8N08_14440 PF01261 Xylose isomerase-like TIM barrel J8N08_14445 PF03459 TOBE domain J8N08_14445 PF17912 MalK OB fold domain J8N08_14445 PF00005 ABC transporter J8N08_14450 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14455 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14460 PF13416 Bacterial extracellular solute-binding protein J8N08_14465 PF17938 Tetracyclin repressor-like, C-terminal domain J8N08_14465 PF00440 Bacterial regulatory proteins, tetR family J8N08_14470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_14470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_14485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_14485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_14490 PF00313 'Cold-shock' DNA-binding domain J8N08_14500 PF01165 Ribosomal protein S21 J8N08_14535 PF00550 Phosphopantetheine attachment site J8N08_14540 PF00005 ABC transporter J8N08_14540 PF02687 FtsX-like permease family J8N08_14540 PF12704 MacB-like periplasmic core domain J8N08_14545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8N08_14560 PF00486 Transcriptional regulatory protein, C terminal J8N08_14560 PF00072 Response regulator receiver domain J8N08_14565 PF00512 His Kinase A (phospho-acceptor) domain J8N08_14565 PF00672 HAMP domain J8N08_14565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_14570 PF07470 Glycosyl Hydrolase Family 88 J8N08_14575 PF00295 Glycosyl hydrolases family 28 J8N08_14585 PF00005 ABC transporter J8N08_14585 PF08402 TOBE domain J8N08_14590 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14595 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14600 PF02311 AraC-like ligand binding domain J8N08_14600 PF12833 Helix-turn-helix domain J8N08_14605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_14615 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_14620 PF04909 Amidohydrolase J8N08_14625 PF13378 Enolase C-terminal domain-like J8N08_14625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_14630 PF00701 Dihydrodipicolinate synthetase family J8N08_14640 PF04962 KduI/IolB family J8N08_14645 PF01370 NAD dependent epimerase/dehydratase family J8N08_14650 PF07729 FCD domain J8N08_14650 PF00392 Bacterial regulatory proteins, gntR family J8N08_14665 PF00248 Aldo/keto reductase family J8N08_14670 PF00005 ABC transporter J8N08_14670 PF17912 MalK OB fold domain J8N08_14675 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14680 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14695 PF02311 AraC-like ligand binding domain J8N08_14695 PF12833 Helix-turn-helix domain J8N08_14700 PF07690 Major Facilitator Superfamily J8N08_14705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_14705 PF03466 LysR substrate binding domain J8N08_14710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_14720 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_14725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8N08_14725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_14740 PF00356 Bacterial regulatory proteins, lacI family J8N08_14745 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_14745 PF16912 Glucose dehydrogenase C-terminus J8N08_14760 PF00294 pfkB family carbohydrate kinase J8N08_14765 PF08013 Tagatose 6 phosphate kinase J8N08_14770 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14775 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14780 PF00005 ABC transporter J8N08_14780 PF08402 TOBE domain J8N08_14785 PF17912 MalK OB fold domain J8N08_14785 PF00005 ABC transporter J8N08_14790 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14795 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14800 PF01547 Bacterial extracellular solute-binding protein J8N08_14805 PF01053 Cys/Met metabolism PLP-dependent enzyme J8N08_14815 PF01297 Zinc-uptake complex component A periplasmic J8N08_14820 PF00950 ABC 3 transport family J8N08_14825 PF00005 ABC transporter J8N08_14830 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8N08_14830 PF07683 Cobalamin synthesis protein cobW C-terminal domain J8N08_14845 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8N08_14845 PF07683 Cobalamin synthesis protein cobW C-terminal domain J8N08_14850 PF13416 Bacterial extracellular solute-binding protein J8N08_14855 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14860 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14865 PF08402 TOBE domain J8N08_14865 PF00005 ABC transporter J8N08_14880 PF03922 OmpW family J8N08_14900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J8N08_14900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J8N08_14905 PF03466 LysR substrate binding domain J8N08_14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_14910 PF13407 Periplasmic binding protein domain J8N08_14915 PF02653 Branched-chain amino acid transport system / permease component J8N08_14920 PF00005 ABC transporter J8N08_14925 PF13426 PAS domain J8N08_14925 PF00563 EAL domain J8N08_14925 PF00990 Diguanylate cyclase, GGDEF domain J8N08_14925 PF05231 MASE1 J8N08_14925 PF08447 PAS fold J8N08_14925 PF08448 PAS fold J8N08_14930 PF07883 Cupin domain J8N08_14930 PF05899 Protein of unknown function (DUF861) J8N08_14940 PF00990 Diguanylate cyclase, GGDEF domain J8N08_14940 PF08447 PAS fold J8N08_14940 PF00563 EAL domain J8N08_14940 PF08448 PAS fold J8N08_14945 PF02615 Malate/L-lactate dehydrogenase J8N08_14950 PF17854 FtsK alpha domain J8N08_14950 PF09397 Ftsk gamma domain J8N08_14950 PF01580 FtsK/SpoIIIE family J8N08_14950 PF13491 4TM region of DNA translocase FtsK/SpoIIIE J8N08_14955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_14960 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14965 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_14965 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_14970 PF00005 ABC transporter J8N08_14970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_14975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_14975 PF00005 ABC transporter J8N08_14980 PF00266 Aminotransferase class-V J8N08_14990 PF00920 Dehydratase family J8N08_14995 PF13407 Periplasmic binding protein domain J8N08_15000 PF00005 ABC transporter J8N08_15005 PF02653 Branched-chain amino acid transport system / permease component J8N08_15010 PF02653 Branched-chain amino acid transport system / permease component J8N08_15015 PF00392 Bacterial regulatory proteins, gntR family J8N08_15015 PF07729 FCD domain J8N08_15020 PF07690 Major Facilitator Superfamily J8N08_15030 PF07733 Bacterial DNA polymerase III alpha NTPase domain J8N08_15030 PF14579 Helix-hairpin-helix motif J8N08_15030 PF02811 PHP domain J8N08_15030 PF01336 OB-fold nucleic acid binding domain J8N08_15030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J8N08_15055 PF13660 Domain of unknown function (DUF4147) J8N08_15055 PF05161 MOFRL family J8N08_15060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_15060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_15070 PF17912 MalK OB fold domain J8N08_15070 PF03459 TOBE domain J8N08_15070 PF00005 ABC transporter J8N08_15075 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15080 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15085 PF01547 Bacterial extracellular solute-binding protein J8N08_15095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_15105 PF01425 Amidase J8N08_15110 PF00990 Diguanylate cyclase, GGDEF domain J8N08_15110 PF00563 EAL domain J8N08_15110 PF08448 PAS fold J8N08_15110 PF08447 PAS fold J8N08_15125 PF03776 Septum formation topological specificity factor MinE J8N08_15130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J8N08_15135 PF03775 Septum formation inhibitor MinC, C-terminal domain J8N08_15135 PF05209 Septum formation inhibitor MinC, N-terminal domain J8N08_15140 PF13419 Haloacid dehalogenase-like hydrolase J8N08_15145 PF07729 FCD domain J8N08_15145 PF00392 Bacterial regulatory proteins, gntR family J8N08_15150 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_15160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_15165 PF00107 Zinc-binding dehydrogenase J8N08_15165 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_15170 PF03786 D-mannonate dehydratase (UxuA) J8N08_15180 PF00171 Aldehyde dehydrogenase family J8N08_15185 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_15190 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J8N08_15190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_15195 PF00296 Luciferase-like monooxygenase J8N08_15210 PF02798 Glutathione S-transferase, N-terminal domain J8N08_15210 PF00043 Glutathione S-transferase, C-terminal domain J8N08_15215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_15215 PF00005 ABC transporter J8N08_15220 PF03841 L-seryl-tRNA selenium transferase J8N08_15235 PF01979 Amidohydrolase family J8N08_15240 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15240 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_15245 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_15255 PF13439 Glycosyltransferase Family 4 J8N08_15255 PF00534 Glycosyl transferases group 1 J8N08_15265 PF02563 Polysaccharide biosynthesis/export protein J8N08_15270 PF13533 Biotin-lipoyl like J8N08_15275 PF00873 AcrB/AcrD/AcrF family J8N08_15290 PF01613 Flavin reductase like domain J8N08_15295 PF00248 Aldo/keto reductase family J8N08_15300 PF00296 Luciferase-like monooxygenase J8N08_15305 PF07702 UTRA domain J8N08_15305 PF00392 Bacterial regulatory proteins, gntR family J8N08_15310 PF00005 ABC transporter J8N08_15310 PF08402 TOBE domain J8N08_15315 PF01547 Bacterial extracellular solute-binding protein J8N08_15320 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15325 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15330 PF01055 Glycosyl hydrolases family 31 J8N08_15340 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15345 PF09084 NMT1/THI5 like J8N08_15350 PF02110 Hydroxyethylthiazole kinase family J8N08_15355 PF02581 Thiamine monophosphate synthase J8N08_15360 PF08543 Phosphomethylpyrimidine kinase J8N08_15365 PF01037 Lrp/AsnC ligand binding domain J8N08_15370 PF00842 Alanine racemase, C-terminal domain J8N08_15370 PF01168 Alanine racemase, N-terminal domain J8N08_15375 PF01266 FAD dependent oxidoreductase J8N08_15390 PF02954 Bacterial regulatory protein, Fis family J8N08_15390 PF00072 Response regulator receiver domain J8N08_15390 PF00158 Sigma-54 interaction domain J8N08_15395 PF00512 His Kinase A (phospho-acceptor) domain J8N08_15395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_15400 PF00375 Sodium:dicarboxylate symporter family J8N08_15405 PF00892 EamA-like transporter family J8N08_15410 PF00202 Aminotransferase class-III J8N08_15425 PF01546 Peptidase family M20/M25/M40 J8N08_15425 PF07687 Peptidase dimerisation domain J8N08_15435 PF01270 Glycosyl hydrolases family 8 J8N08_15445 PF03552 Cellulose synthase J8N08_15445 PF00535 Glycosyl transferase family 2 J8N08_15445 PF07238 PilZ domain J8N08_15475 PF16363 GDP-mannose 4,6 dehydratase J8N08_15480 PF16363 GDP-mannose 4,6 dehydratase J8N08_15490 PF00196 Bacterial regulatory proteins, luxR family J8N08_15505 PF00005 ABC transporter J8N08_15505 PF00664 ABC transporter transmembrane region J8N08_15510 PF00529 HlyD membrane-fusion protein of T1SS J8N08_15525 PF02563 Polysaccharide biosynthesis/export protein J8N08_15530 PF02397 Bacterial sugar transferase J8N08_15545 PF00202 Aminotransferase class-III J8N08_15550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_15550 PF00672 HAMP domain J8N08_15555 PF03734 L,D-transpeptidase catalytic domain J8N08_15555 PF17969 L,D-transpeptidase C-terminal domain J8N08_15575 PF02245 Methylpurine-DNA glycosylase (MPG) J8N08_15590 PF00356 Bacterial regulatory proteins, lacI family J8N08_15595 PF01547 Bacterial extracellular solute-binding protein J8N08_15600 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15605 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15610 PF17912 MalK OB fold domain J8N08_15610 PF00005 ABC transporter J8N08_15610 PF03459 TOBE domain J8N08_15620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_15620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_15625 PF04055 Radical SAM superfamily J8N08_15630 PF01242 6-pyruvoyl tetrahydropterin synthase J8N08_15635 PF06508 Queuosine biosynthesis protein QueC J8N08_15645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_15645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_15655 PF17912 MalK OB fold domain J8N08_15655 PF00005 ABC transporter J8N08_15660 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15665 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15670 PF01547 Bacterial extracellular solute-binding protein J8N08_15680 PF01050 Mannose-6-phosphate isomerase J8N08_15680 PF00483 Nucleotidyl transferase J8N08_15685 PF01011 PQQ enzyme repeat J8N08_15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_15690 PF03466 LysR substrate binding domain J8N08_15695 PF00390 Malic enzyme, N-terminal domain J8N08_15695 PF03949 Malic enzyme, NAD binding domain J8N08_15695 PF01515 Phosphate acetyl/butaryl transferase J8N08_15700 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_15705 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15710 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15715 PF00005 ABC transporter J8N08_15720 PF03972 MmgE/PrpD family J8N08_15725 PF00296 Luciferase-like monooxygenase J8N08_15730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_15730 PF08447 PAS fold J8N08_15730 PF13426 PAS domain J8N08_15735 PF01266 FAD dependent oxidoreductase J8N08_15750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component J8N08_15755 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_15760 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_15765 PF07722 Peptidase C26 J8N08_15770 PF02653 Branched-chain amino acid transport system / permease component J8N08_15775 PF00005 ABC transporter J8N08_15780 PF13407 Periplasmic binding protein domain J8N08_15785 PF01546 Peptidase family M20/M25/M40 J8N08_15790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_15800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_15800 PF00005 ABC transporter J8N08_15805 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_15805 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15810 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_15815 PF03466 LysR substrate binding domain J8N08_15820 PF01112 Asparaginase J8N08_15835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_15850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_15850 PF00005 ABC transporter J8N08_15855 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_15855 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15860 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_15865 PF00072 Response regulator receiver domain J8N08_15865 PF00196 Bacterial regulatory proteins, luxR family J8N08_15870 PF00529 HlyD membrane-fusion protein of T1SS J8N08_15870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8N08_15875 PF00005 ABC transporter J8N08_15875 PF00664 ABC transporter transmembrane region J8N08_15895 PF12680 SnoaL-like domain J8N08_15895 PF08281 Sigma-70, region 4 J8N08_15895 PF04542 Sigma-70 region 2 J8N08_15900 PF00005 ABC transporter J8N08_15905 PF01032 FecCD transport family J8N08_15920 PF01209 ubiE/COQ5 methyltransferase family J8N08_15925 PF00127 Copper binding proteins, plastocyanin/azurin family J8N08_15930 PF00005 ABC transporter J8N08_15935 PF01032 FecCD transport family J8N08_15950 PF01546 Peptidase family M20/M25/M40 J8N08_15950 PF07687 Peptidase dimerisation domain J8N08_15955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_15965 PF00171 Aldehyde dehydrogenase family J8N08_15970 PF00180 Isocitrate/isopropylmalate dehydrogenase J8N08_15975 PF00171 Aldehyde dehydrogenase family J8N08_15980 PF01266 FAD dependent oxidoreductase J8N08_15995 PF00202 Aminotransferase class-III J8N08_16005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_16010 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16015 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16015 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_16020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_16020 PF00005 ABC transporter J8N08_16025 PF01037 Lrp/AsnC ligand binding domain J8N08_16030 PF01266 FAD dependent oxidoreductase J8N08_16040 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_16045 PF00005 ABC transporter J8N08_16055 PF01546 Peptidase family M20/M25/M40 J8N08_16055 PF07687 Peptidase dimerisation domain J8N08_16060 PF00296 Luciferase-like monooxygenase J8N08_16065 PF00296 Luciferase-like monooxygenase J8N08_16070 PF02082 Transcriptional regulator J8N08_16080 PF01613 Flavin reductase like domain J8N08_16085 PF00296 Luciferase-like monooxygenase J8N08_16100 PF00296 Luciferase-like monooxygenase J8N08_16105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_16105 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_16105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_16115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_16120 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16125 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16130 PF00005 ABC transporter J8N08_16130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_16135 PF00005 ABC transporter J8N08_16135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_16140 PF00248 Aldo/keto reductase family J8N08_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_16150 PF03466 LysR substrate binding domain J8N08_16155 PF00296 Luciferase-like monooxygenase J8N08_16170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_16175 PF01546 Peptidase family M20/M25/M40 J8N08_16175 PF07687 Peptidase dimerisation domain J8N08_16180 PF00296 Luciferase-like monooxygenase J8N08_16185 PF05368 NmrA-like family J8N08_16195 PF00296 Luciferase-like monooxygenase J8N08_16200 PF00296 Luciferase-like monooxygenase J8N08_16205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_16205 PF13378 Enolase C-terminal domain-like J8N08_16215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_16220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_16220 PF00005 ABC transporter J8N08_16225 PF00005 ABC transporter J8N08_16225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_16230 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16230 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_16235 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16245 PF00392 Bacterial regulatory proteins, gntR family J8N08_16245 PF07729 FCD domain J8N08_16255 PF00561 alpha/beta hydrolase fold J8N08_16260 PF00106 short chain dehydrogenase J8N08_16270 PF00753 Metallo-beta-lactamase superfamily J8N08_16270 PF04273 Putative phosphatase (DUF442) J8N08_16280 PF04143 Sulphur transport J8N08_16290 PF01676 Metalloenzyme superfamily J8N08_16290 PF06415 BPG-independent PGAM N-terminus (iPGM_N) J8N08_16295 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) J8N08_16295 PF02817 e3 binding domain J8N08_16295 PF00364 Biotin-requiring enzyme J8N08_16300 PF02780 Transketolase, C-terminal domain J8N08_16300 PF02779 Transketolase, pyrimidine binding domain J8N08_16305 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal J8N08_16305 PF00676 Dehydrogenase E1 component J8N08_16310 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_16310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_16310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_16315 PF02803 Thiolase, C-terminal domain J8N08_16315 PF00108 Thiolase, N-terminal domain J8N08_16320 PF01037 Lrp/AsnC ligand binding domain J8N08_16325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_16325 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_16325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_16330 PF01039 Carboxyl transferase domain J8N08_16335 PF00364 Biotin-requiring enzyme J8N08_16335 PF00289 Biotin carboxylase, N-terminal domain J8N08_16335 PF02785 Biotin carboxylase C-terminal domain J8N08_16335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_16340 PF00682 HMGL-like J8N08_16345 PF00378 Enoyl-CoA hydratase/isomerase J8N08_16350 PF02569 Pantoate-beta-alanine ligase J8N08_16355 PF02548 Ketopantoate hydroxymethyltransferase J8N08_16360 PF01261 Xylose isomerase-like TIM barrel J8N08_16365 PF00596 Class II Aldolase and Adducin N-terminal domain J8N08_16370 PF00455 DeoR C terminal sensor domain J8N08_16370 PF08220 DeoR-like helix-turn-helix domain J8N08_16375 PF13407 Periplasmic binding protein domain J8N08_16380 PF00005 ABC transporter J8N08_16385 PF02653 Branched-chain amino acid transport system / permease component J8N08_16390 PF02653 Branched-chain amino acid transport system / permease component J8N08_16395 PF05336 L-rhamnose mutarotase J8N08_16405 PF00561 alpha/beta hydrolase fold J8N08_16415 PF08448 PAS fold J8N08_16415 PF00990 Diguanylate cyclase, GGDEF domain J8N08_16415 PF00563 EAL domain J8N08_16415 PF08447 PAS fold J8N08_16425 PF00171 Aldehyde dehydrogenase family J8N08_16430 PF08713 DNA alkylation repair enzyme J8N08_16435 PF00005 ABC transporter J8N08_16440 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16445 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16455 PF00378 Enoyl-CoA hydratase/isomerase J8N08_16475 PF08241 Methyltransferase domain J8N08_16485 PF00795 Carbon-nitrogen hydrolase J8N08_16490 PF00462 Glutaredoxin J8N08_16500 PF08241 Methyltransferase domain J8N08_16515 PF00293 NUDIX domain J8N08_16520 PF00583 Acetyltransferase (GNAT) family J8N08_16520 PF13508 Acetyltransferase (GNAT) domain J8N08_16525 PF01960 ArgJ family J8N08_16535 PF02810 SEC-C motif J8N08_16535 PF07516 SecA Wing and Scaffold domain J8N08_16535 PF01043 SecA preprotein cross-linking domain J8N08_16535 PF07517 SecA DEAD-like domain J8N08_16545 PF01757 Acyltransferase family J8N08_16795 PF01119 DNA mismatch repair protein, C-terminal domain J8N08_16795 PF08676 MutL C terminal dimerisation domain J8N08_16800 PF00145 C-5 cytosine-specific DNA methylase J8N08_16840 PF01943 Polysaccharide biosynthesis protein J8N08_16855 PF01757 Acyltransferase family J8N08_16865 PF13614 AAA domain J8N08_16885 PF13439 Glycosyltransferase Family 4 J8N08_16885 PF00534 Glycosyl transferases group 1 J8N08_16890 PF13439 Glycosyltransferase Family 4 J8N08_16890 PF00534 Glycosyl transferases group 1 J8N08_16905 PF01272 Transcription elongation factor, GreA/GreB, C-term J8N08_16905 PF03449 Transcription elongation factor, N-terminal J8N08_16910 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) J8N08_16910 PF00722 Glycosyl hydrolases family 16 J8N08_16920 PF03009 Glycerophosphoryl diester phosphodiesterase family J8N08_16925 PF17912 MalK OB fold domain J8N08_16925 PF00005 ABC transporter J8N08_16930 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16935 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_16945 PF01047 MarR family J8N08_16945 PF00480 ROK family J8N08_16970 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding J8N08_16985 PF01381 Helix-turn-helix J8N08_16995 PF00005 ABC transporter J8N08_17000 PF02653 Branched-chain amino acid transport system / permease component J8N08_17005 PF13407 Periplasmic binding protein domain J8N08_17015 PF01266 FAD dependent oxidoreductase J8N08_17015 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J8N08_17025 PF02310 B12 binding domain J8N08_17025 PF01642 Methylmalonyl-CoA mutase J8N08_17030 PF00364 Biotin-requiring enzyme J8N08_17030 PF18140 Propionyl-coenzyme A carboxylase BT domain J8N08_17030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_17030 PF02785 Biotin carboxylase C-terminal domain J8N08_17030 PF00289 Biotin carboxylase, N-terminal domain J8N08_17035 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family J8N08_17045 PF02798 Glutathione S-transferase, N-terminal domain J8N08_17050 PF01039 Carboxyl transferase domain J8N08_17055 PF01381 Helix-turn-helix J8N08_17055 PF09856 Predicted transcriptional regulator (DUF2083) J8N08_17055 PF06114 IrrE N-terminal-like domain J8N08_17060 PF06029 AlkA N-terminal domain J8N08_17060 PF00730 HhH-GPD superfamily base excision DNA repair protein J8N08_17060 PF12833 Helix-turn-helix domain J8N08_17060 PF02805 Metal binding domain of Ada J8N08_17065 PF00749 tRNA synthetases class I (E and Q), catalytic domain J8N08_17075 PF00106 short chain dehydrogenase J8N08_17085 PF01923 Cobalamin adenosyltransferase J8N08_17095 PF01012 Electron transfer flavoprotein domain J8N08_17100 PF01012 Electron transfer flavoprotein domain J8N08_17100 PF00766 Electron transfer flavoprotein FAD-binding domain J8N08_17105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain J8N08_17105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain J8N08_17110 PF08534 Redoxin J8N08_17115 PF00206 Lyase J8N08_17115 PF14698 Argininosuccinate lyase C-terminal J8N08_17125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J8N08_17125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain J8N08_17135 PF00072 Response regulator receiver domain J8N08_17140 PF00156 Phosphoribosyl transferase domain J8N08_17150 PF00005 ABC transporter J8N08_17170 PF04752 ChaC-like protein J8N08_17185 PF02153 Prephenate dehydrogenase J8N08_17190 PF00155 Aminotransferase class I and II J8N08_17195 PF01209 ubiE/COQ5 methyltransferase family J8N08_17200 PF16123 Hydroxyacylglutathione hydrolase C-terminus J8N08_17200 PF00753 Metallo-beta-lactamase superfamily J8N08_17215 PF00830 Ribosomal L28 family J8N08_17220 PF02592 Putative vitamin uptake transporter J8N08_17235 PF11775 Cobalamin biosynthesis protein CobT VWA domain J8N08_17235 PF06213 Cobalamin biosynthesis protein CobT J8N08_17240 PF08406 CbbQ/NirQ/NorQ C-terminal J8N08_17240 PF12556 Cobaltochelatase CobS subunit N terminal J8N08_17240 PF07728 AAA domain (dynein-related subfamily) J8N08_17245 PF00226 DnaJ domain J8N08_17250 PF01722 BolA-like protein J8N08_17255 PF01761 3-dehydroquinate synthase J8N08_17260 PF01202 Shikimate kinase J8N08_17270 PF02899 Phage integrase, N-terminal SAM-like domain J8N08_17270 PF00589 Phage integrase family J8N08_17275 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit J8N08_17280 PF03734 L,D-transpeptidase catalytic domain J8N08_17285 PF01206 Sulfurtransferase TusA J8N08_17290 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8N08_17290 PF07683 Cobalamin synthesis protein cobW C-terminal domain J8N08_17295 PF00768 D-alanyl-D-alanine carboxypeptidase J8N08_17295 PF07943 Penicillin-binding protein 5, C-terminal domain J8N08_17300 PF01546 Peptidase family M20/M25/M40 J8N08_17300 PF07687 Peptidase dimerisation domain J8N08_17310 PF06832 Penicillin-Binding Protein C-terminus Family J8N08_17310 PF00912 Transglycosylase J8N08_17310 PF00905 Penicillin binding protein transpeptidase domain J8N08_17315 PF17962 Bacterial macroglobulin domain 6 J8N08_17315 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain J8N08_17315 PF01835 MG2 domain J8N08_17315 PF07678 A-macroglobulin TED domain J8N08_17315 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain J8N08_17315 PF11974 Bacterial alpha-2-macroglobulin MG3 domain J8N08_17315 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain J8N08_17315 PF07703 Alpha-2-macroglobulin bait region domain J8N08_17315 PF00207 Alpha-2-macroglobulin family J8N08_17320 PF03966 Trm112p-like protein J8N08_17330 PF00085 Thioredoxin J8N08_17365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8N08_17365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_17365 PF01842 ACT domain J8N08_17375 PF13505 Outer membrane protein beta-barrel domain J8N08_17380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J8N08_17380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J8N08_17380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J8N08_17380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J8N08_17385 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_17385 PF17862 AAA+ lid domain J8N08_17385 PF06480 FtsH Extracellular J8N08_17385 PF01434 Peptidase family M41 J8N08_17390 PF01171 PP-loop family J8N08_17400 PF00691 OmpA family J8N08_17405 PF04052 TolB amino-terminal domain J8N08_17405 PF07676 WD40-like Beta Propeller Repeat J8N08_17415 PF02472 Biopolymer transport protein ExbD/TolR J8N08_17420 PF01618 MotA/TolQ/ExbB proton channel family J8N08_17425 PF03061 Thioesterase superfamily J8N08_17430 PF00293 NUDIX domain J8N08_17435 PF00293 NUDIX domain J8N08_17450 PF17864 RuvB AAA lid domain J8N08_17450 PF05491 RuvB C-terminal winged helix domain J8N08_17450 PF05496 Holliday junction DNA helicase RuvB P-loop domain J8N08_17455 PF07499 RuvA, C-terminal domain J8N08_17455 PF01330 RuvA N terminal domain J8N08_17460 PF02075 Crossover junction endodeoxyribonuclease RuvC J8N08_17465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_17465 PF00672 HAMP domain J8N08_17470 PF00296 Luciferase-like monooxygenase J8N08_17475 PF01709 Transcriptional regulator J8N08_17490 PF13277 YmdB-like protein J8N08_17500 PF01595 Cyclin M transmembrane N-terminal domain J8N08_17500 PF03471 Transporter associated domain J8N08_17500 PF00571 CBS domain J8N08_17520 PF02779 Transketolase, pyrimidine binding domain J8N08_17520 PF02780 Transketolase, C-terminal domain J8N08_17520 PF00456 Transketolase, thiamine diphosphate binding domain J8N08_17525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain J8N08_17525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain J8N08_17535 PF03471 Transporter associated domain J8N08_17535 PF00999 Sodium/hydrogen exchanger family J8N08_17540 PF00162 Phosphoglycerate kinase J8N08_17545 PF00274 Fructose-bisphosphate aldolase class-I J8N08_17570 PF01197 Ribosomal protein L31 J8N08_17575 PF00005 ABC transporter J8N08_17575 PF00664 ABC transporter transmembrane region J8N08_17580 PF00890 FAD binding domain J8N08_17585 PF01389 OmpA-like transmembrane domain J8N08_17585 PF00691 OmpA family J8N08_17595 PF00459 Inositol monophosphatase family J8N08_17625 PF00731 AIR carboxylase J8N08_17630 PF02222 ATP-grasp domain J8N08_17630 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain J8N08_17635 PF00444 Ribosomal protein L36 J8N08_17645 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) J8N08_17665 PF00224 Pyruvate kinase, barrel domain J8N08_17665 PF02887 Pyruvate kinase, alpha/beta domain J8N08_17670 PF05951 Bacterial protein of unknown function (DUF882) J8N08_17675 PF00158 Sigma-54 interaction domain J8N08_17675 PF02954 Bacterial regulatory protein, Fis family J8N08_17675 PF00072 Response regulator receiver domain J8N08_17680 PF08439 Oligopeptidase F J8N08_17680 PF01432 Peptidase family M3 J8N08_17685 PF01063 Amino-transferase class IV J8N08_17690 PF00990 Diguanylate cyclase, GGDEF domain J8N08_17695 PF16653 Saccharopine dehydrogenase C-terminal domain J8N08_17695 PF03435 Saccharopine dehydrogenase NADP binding domain J8N08_17705 PF02872 5'-nucleotidase, C-terminal domain J8N08_17705 PF00149 Calcineurin-like phosphoesterase J8N08_17710 PF00762 Ferrochelatase J8N08_17715 PF01145 SPFH domain / Band 7 family J8N08_17715 PF16200 C-terminal region of band_7 J8N08_17725 PF00571 CBS domain J8N08_17725 PF01380 SIS domain J8N08_17740 PF00483 Nucleotidyl transferase J8N08_17745 PF13406 Transglycosylase SLT domain J8N08_17755 PF00072 Response regulator receiver domain J8N08_17755 PF00486 Transcriptional regulatory protein, C terminal J8N08_17760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_17760 PF00512 His Kinase A (phospho-acceptor) domain J8N08_17760 PF00672 HAMP domain J8N08_17765 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_17765 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster J8N08_17775 PF01493 GXGXG motif J8N08_17775 PF04898 Glutamate synthase central domain J8N08_17775 PF00310 Glutamine amidotransferases class-II J8N08_17775 PF01645 Conserved region in glutamate synthase J8N08_17780 PF01212 Beta-eliminating lyase J8N08_17785 PF00486 Transcriptional regulatory protein, C terminal J8N08_17785 PF00072 Response regulator receiver domain J8N08_17790 PF13492 GAF domain J8N08_17790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_17790 PF00512 His Kinase A (phospho-acceptor) domain J8N08_17790 PF02702 Osmosensitive K+ channel His kinase sensor domain J8N08_17790 PF13493 Domain of unknown function (DUF4118) J8N08_17795 PF02669 K+-transporting ATPase, c chain J8N08_17810 PF03814 Potassium-transporting ATPase A subunit J8N08_17825 PF00710 Asparaginase, N-terminal J8N08_17825 PF17763 Glutaminase/Asparaginase C-terminal domain J8N08_17830 PF00324 Amino acid permease J8N08_17835 PF10415 Fumarase C C-terminus J8N08_17835 PF00206 Lyase J8N08_17840 PF07729 FCD domain J8N08_17840 PF00392 Bacterial regulatory proteins, gntR family J8N08_17845 PF00873 AcrB/AcrD/AcrF family J8N08_17855 PF13533 Biotin-lipoyl like J8N08_17860 PF13977 BetI-type transcriptional repressor, C-terminal J8N08_17860 PF00440 Bacterial regulatory proteins, tetR family J8N08_17865 PF00487 Fatty acid desaturase J8N08_17885 PF03466 LysR substrate binding domain J8N08_17885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_17900 PF00171 Aldehyde dehydrogenase family J8N08_17905 PF08402 TOBE domain J8N08_17905 PF00005 ABC transporter J8N08_17910 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_17915 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_17935 PF00296 Luciferase-like monooxygenase J8N08_17940 PF01613 Flavin reductase like domain J8N08_17945 PF12697 Alpha/beta hydrolase family J8N08_17955 PF00465 Iron-containing alcohol dehydrogenase J8N08_17960 PF00005 ABC transporter J8N08_17965 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_17975 PF07729 FCD domain J8N08_17975 PF00392 Bacterial regulatory proteins, gntR family J8N08_17980 PF00551 Formyl transferase J8N08_17985 PF00120 Glutamine synthetase, catalytic domain J8N08_17990 PF01645 Conserved region in glutamate synthase J8N08_17995 PF01493 GXGXG motif J8N08_18020 PF00701 Dihydrodipicolinate synthetase family J8N08_18025 PF00005 ABC transporter J8N08_18025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_18030 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_18030 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18035 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_18050 PF04166 Pyridoxal phosphate biosynthetic protein PdxA J8N08_18055 PF00465 Iron-containing alcohol dehydrogenase J8N08_18060 PF00392 Bacterial regulatory proteins, gntR family J8N08_18060 PF07729 FCD domain J8N08_18075 PF03061 Thioesterase superfamily J8N08_18100 PF04168 A predicted alpha-helical domain with a conserved ER motif. J8N08_18100 PF14403 Circularly permuted ATP-grasp type 2 J8N08_18105 PF08379 Bacterial transglutaminase-like N-terminal region J8N08_18105 PF01841 Transglutaminase-like superfamily J8N08_18115 PF12848 ABC transporter J8N08_18115 PF00005 ABC transporter J8N08_18120 PF01070 FMN-dependent dehydrogenase J8N08_18125 PF01047 MarR family J8N08_18130 PF00672 HAMP domain J8N08_18130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_18135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_18135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_18140 PF01791 DeoC/LacD family aldolase J8N08_18145 PF01266 FAD dependent oxidoreductase J8N08_18145 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J8N08_18150 PF00248 Aldo/keto reductase family J8N08_18160 PF02653 Branched-chain amino acid transport system / permease component J8N08_18165 PF00005 ABC transporter J8N08_18170 PF13407 Periplasmic binding protein domain J8N08_18180 PF00072 Response regulator receiver domain J8N08_18190 PF00459 Inositol monophosphatase family J8N08_18200 PF00011 Hsp20/alpha crystallin family J8N08_18205 PF13593 SBF-like CPA transporter family (DUF4137) J8N08_18210 PF03466 LysR substrate binding domain J8N08_18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_18215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_18215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_18230 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18235 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18240 PF00005 ABC transporter J8N08_18240 PF17912 MalK OB fold domain J8N08_18245 PF00005 ABC transporter J8N08_18245 PF08402 TOBE domain J8N08_18250 PF01266 FAD dependent oxidoreductase J8N08_18250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase J8N08_18255 PF08220 DeoR-like helix-turn-helix domain J8N08_18255 PF00455 DeoR C terminal sensor domain J8N08_18260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases J8N08_18260 PF10414 Sirohaem synthase dimerisation region J8N08_18260 PF14824 Sirohaem biosynthesis protein central J8N08_18265 PF01568 Molydopterin dinucleotide binding domain J8N08_18265 PF00384 Molybdopterin oxidoreductase J8N08_18265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J8N08_18265 PF04324 BFD-like [2Fe-2S] binding domain J8N08_18275 PF18267 Rubredoxin NAD+ reductase C-terminal domain J8N08_18275 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_18275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain J8N08_18275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain J8N08_18275 PF04324 BFD-like [2Fe-2S] binding domain J8N08_18280 PF00005 ABC transporter J8N08_18285 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18300 PF03861 ANTAR domain J8N08_18300 PF08376 Nitrate and nitrite sensing J8N08_18305 PF00392 Bacterial regulatory proteins, gntR family J8N08_18305 PF07729 FCD domain J8N08_18310 PF01566 Natural resistance-associated macrophage protein J8N08_18315 PF03746 LamB/YcsF family J8N08_18320 PF07286 Protein of unknown function (DUF1445) J8N08_18325 PF02682 Carboxyltransferase domain, subdomain C and D J8N08_18330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_18330 PF00289 Biotin carboxylase, N-terminal domain J8N08_18330 PF02785 Biotin carboxylase C-terminal domain J8N08_18330 PF00364 Biotin-requiring enzyme J8N08_18335 PF02806 Alpha amylase, C-terminal all-beta domain J8N08_18335 PF00128 Alpha amylase, catalytic domain J8N08_18340 PF09278 MerR, DNA binding J8N08_18340 PF00376 MerR family regulatory protein J8N08_18345 PF00593 TonB dependent receptor J8N08_18345 PF07715 TonB-dependent Receptor Plug Domain J8N08_18350 PF00591 Glycosyl transferase family, a/b domain J8N08_18350 PF02885 Glycosyl transferase family, helical bundle domain J8N08_18355 PF06772 Bacterial low temperature requirement A protein (LtrA) J8N08_18370 PF11800 Replication protein C C-terminal region J8N08_18370 PF03428 Replication protein C N-terminal domain J8N08_18375 PF02195 ParB-like nuclease domain J8N08_18375 PF07506 RepB plasmid partitioning protein J8N08_18380 PF13614 AAA domain J8N08_18390 PF01042 Endoribonuclease L-PSP J8N08_18395 PF14031 Putative serine dehydratase domain J8N08_18395 PF01168 Alanine racemase, N-terminal domain J8N08_18400 PF07171 MlrC C-terminus J8N08_18400 PF07364 Metallopeptidase family M81 J8N08_18405 PF05962 HutD J8N08_18410 PF12697 Alpha/beta hydrolase family J8N08_18415 PF01175 Urocanase Rossmann-like domain J8N08_18415 PF17392 Urocanase C-terminal domain J8N08_18415 PF17391 Urocanase N-terminal domain J8N08_18425 PF00221 Aromatic amino acid lyase J8N08_18430 PF01979 Amidohydrolase family J8N08_18435 PF01979 Amidohydrolase family J8N08_18440 PF07702 UTRA domain J8N08_18440 PF00392 Bacterial regulatory proteins, gntR family J8N08_18475 PF00364 Biotin-requiring enzyme J8N08_18480 PF02785 Biotin carboxylase C-terminal domain J8N08_18480 PF00289 Biotin carboxylase, N-terminal domain J8N08_18480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain J8N08_18495 PF02626 Carboxyltransferase domain, subdomain A and B J8N08_18500 PF03746 LamB/YcsF family J8N08_18505 PF00155 Aminotransferase class I and II J8N08_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_18510 PF03466 LysR substrate binding domain J8N08_18515 PF00106 short chain dehydrogenase J8N08_18520 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18525 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18530 PF00005 ABC transporter J8N08_18535 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_18540 PF03737 Aldolase/RraA J8N08_18545 PF00491 Arginase family J8N08_18550 PF00005 ABC transporter J8N08_18555 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18560 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18565 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_18570 PF03466 LysR substrate binding domain J8N08_18585 PF03358 NADPH-dependent FMN reductase J8N08_18590 PF03960 ArsC family J8N08_18595 PF01758 Sodium Bile acid symporter family J8N08_18605 PF03737 Aldolase/RraA J8N08_18610 PF01370 NAD dependent epimerase/dehydratase family J8N08_18615 PF00920 Dehydratase family J8N08_18620 PF17912 MalK OB fold domain J8N08_18620 PF00005 ABC transporter J8N08_18620 PF03459 TOBE domain J8N08_18625 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18630 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_18640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_18645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_18645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_18650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_18650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_18655 PF07729 FCD domain J8N08_18655 PF00392 Bacterial regulatory proteins, gntR family J8N08_18665 PF00293 NUDIX domain J8N08_18670 PF02567 Phenazine biosynthesis-like protein J8N08_18680 PF01494 FAD binding domain J8N08_18685 PF03466 LysR substrate binding domain J8N08_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_18690 PF07690 Major Facilitator Superfamily J8N08_18695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J8N08_18700 PF00296 Luciferase-like monooxygenase J8N08_18710 PF00005 ABC transporter J8N08_18710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_18715 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18720 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_18725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_18730 PF00384 Molybdopterin oxidoreductase J8N08_18730 PF01568 Molydopterin dinucleotide binding domain J8N08_18735 PF02913 FAD linked oxidases, C-terminal domain J8N08_18735 PF01565 FAD binding domain J8N08_18740 PF01323 DSBA-like thioredoxin domain J8N08_18755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_18755 PF00512 His Kinase A (phospho-acceptor) domain J8N08_18755 PF00672 HAMP domain J8N08_18760 PF00072 Response regulator receiver domain J8N08_18760 PF00486 Transcriptional regulatory protein, C terminal J8N08_18765 PF01569 PAP2 superfamily J8N08_18810 PF13673 Acetyltransferase (GNAT) domain J8N08_18815 PF06968 Biotin and Thiamin Synthesis associated domain J8N08_18815 PF04055 Radical SAM superfamily J8N08_18820 PF00155 Aminotransferase class I and II J8N08_18830 PF00202 Aminotransferase class-III J8N08_18835 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III J8N08_18835 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal J8N08_18850 PF00491 Arginase family J8N08_18855 PF02423 Ornithine cyclodeaminase/mu-crystallin family J8N08_18860 PF00892 EamA-like transporter family J8N08_18865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_18865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_18870 PF00211 Adenylate and Guanylate cyclase catalytic domain J8N08_18880 PF07756 Protein of unknown function (DUF1612) J8N08_18880 PF11972 HTH DNA binding domain J8N08_18885 PF00083 Sugar (and other) transporter J8N08_18890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_18890 PF00512 His Kinase A (phospho-acceptor) domain J8N08_18895 PF00486 Transcriptional regulatory protein, C terminal J8N08_18895 PF00072 Response regulator receiver domain J8N08_18900 PF00884 Sulfatase J8N08_18900 PF08019 Phosphoethanolamine transferase EptA/EptB J8N08_18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_18910 PF03466 LysR substrate binding domain J8N08_18915 PF00593 TonB dependent receptor J8N08_18915 PF07715 TonB-dependent Receptor Plug Domain J8N08_18925 PF01032 FecCD transport family J8N08_18930 PF00005 ABC transporter J8N08_18945 PF02631 RecX family J8N08_18950 PF08450 SMP-30/Gluconolactonase/LRE-like region J8N08_18960 PF02653 Branched-chain amino acid transport system / permease component J8N08_18965 PF00005 ABC transporter J8N08_18970 PF13407 Periplasmic binding protein domain J8N08_18975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_18975 PF07730 Histidine kinase J8N08_18980 PF00072 Response regulator receiver domain J8N08_18980 PF00196 Bacterial regulatory proteins, luxR family J8N08_18990 PF07995 Glucose / Sorbosone dehydrogenase J8N08_19000 PF04445 Putative SAM-dependent methyltransferase J8N08_19005 PF00849 RNA pseudouridylate synthase J8N08_19010 PF01205 Uncharacterized protein family UPF0029 J8N08_19015 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_19015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8N08_19020 PF00571 CBS domain J8N08_19020 PF00005 ABC transporter J8N08_19025 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19035 PF13426 PAS domain J8N08_19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_19035 PF00072 Response regulator receiver domain J8N08_19040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_19045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain J8N08_19045 PF13807 G-rich domain on putative tyrosine kinase J8N08_19045 PF02706 Chain length determinant protein J8N08_19050 PF00483 Nucleotidyl transferase J8N08_19055 PF00535 Glycosyl transferase family 2 J8N08_19060 PF00535 Glycosyl transferase family 2 J8N08_19065 PF00535 Glycosyl transferase family 2 J8N08_19075 PF00722 Glycosyl hydrolases family 16 J8N08_19080 PF01757 Acyltransferase family J8N08_19085 PF01943 Polysaccharide biosynthesis protein J8N08_19090 PF00535 Glycosyl transferase family 2 J8N08_19095 PF04230 Polysaccharide pyruvyl transferase J8N08_19100 PF00535 Glycosyl transferase family 2 J8N08_19105 PF11089 Exopolysaccharide production repressor J8N08_19120 PF01165 Ribosomal protein S21 J8N08_19125 PF01266 FAD dependent oxidoreductase J8N08_19140 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_19140 PF17806 Sarcosine oxidase A3 domain J8N08_19140 PF01571 Aminomethyltransferase folate-binding domain J8N08_19140 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8N08_19160 PF01575 MaoC like domain J8N08_19165 PF00128 Alpha amylase, catalytic domain J8N08_19165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J8N08_19165 PF18390 Glycogen debranching enzyme C-terminal domain J8N08_19170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain J8N08_19170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II J8N08_19170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III J8N08_19170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I J8N08_19175 PF08323 Starch synthase catalytic domain J8N08_19175 PF00534 Glycosyl transferases group 1 J8N08_19180 PF00483 Nucleotidyl transferase J8N08_19185 PF00128 Alpha amylase, catalytic domain J8N08_19185 PF02806 Alpha amylase, C-terminal all-beta domain J8N08_19185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) J8N08_19190 PF00343 Carbohydrate phosphorylase J8N08_19200 PF01177 Asp/Glu/Hydantoin racemase J8N08_19205 PF01037 Lrp/AsnC ligand binding domain J8N08_19215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8N08_19215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_19225 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_19225 PF00107 Zinc-binding dehydrogenase J8N08_19235 PF00005 ABC transporter J8N08_19235 PF00664 ABC transporter transmembrane region J8N08_19240 PF00664 ABC transporter transmembrane region J8N08_19240 PF00005 ABC transporter J8N08_19245 PF01654 Cytochrome bd terminal oxidase subunit I J8N08_19250 PF02322 Cytochrome bd terminal oxidase subunit II J8N08_19255 PF08173 Membrane bound YbgT-like protein J8N08_19275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain J8N08_19275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain J8N08_19280 PF00890 FAD binding domain J8N08_19280 PF02910 Fumarate reductase flavoprotein C-term J8N08_19285 PF02445 Quinolinate synthetase A protein J8N08_19315 PF02224 Cytidylate kinase J8N08_19320 PF00575 S1 RNA binding domain J8N08_19350 PF00106 short chain dehydrogenase J8N08_19355 PF01321 Creatinase/Prolidase N-terminal domain J8N08_19355 PF00557 Metallopeptidase family M24 J8N08_19360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_19365 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19370 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19370 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_19375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_19375 PF00005 ABC transporter J8N08_19380 PF00005 ABC transporter J8N08_19380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_19385 PF07729 FCD domain J8N08_19385 PF00392 Bacterial regulatory proteins, gntR family J8N08_19390 PF13378 Enolase C-terminal domain-like J8N08_19390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_19395 PF00296 Luciferase-like monooxygenase J8N08_19410 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_19410 PF00005 ABC transporter J8N08_19415 PF00005 ABC transporter J8N08_19420 PF02653 Branched-chain amino acid transport system / permease component J8N08_19425 PF02653 Branched-chain amino acid transport system / permease component J8N08_19425 PF11862 Domain of unknown function (DUF3382) J8N08_19430 PF00732 GMC oxidoreductase J8N08_19430 PF05199 GMC oxidoreductase J8N08_19435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8N08_19435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_19440 PF00501 AMP-binding enzyme J8N08_19440 PF13193 AMP-binding enzyme C-terminal domain J8N08_19465 PF01011 PQQ enzyme repeat J8N08_19470 PF05974 Domain of unknown function (DUF892) J8N08_19480 PF01965 DJ-1/PfpI family J8N08_19505 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain J8N08_19505 PF02951 Prokaryotic glutathione synthetase, N-terminal domain J8N08_19510 PF16363 GDP-mannose 4,6 dehydratase J8N08_19515 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J8N08_19515 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J8N08_19515 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J8N08_19525 PF13409 Glutathione S-transferase, N-terminal domain J8N08_19530 PF03466 LysR substrate binding domain J8N08_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_19535 PF00171 Aldehyde dehydrogenase family J8N08_19540 PF09084 NMT1/THI5 like J8N08_19545 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19550 PF00005 ABC transporter J8N08_19555 PF00171 Aldehyde dehydrogenase family J8N08_19555 PF01619 Proline dehydrogenase J8N08_19555 PF14850 DNA-binding domain of Proline dehydrogenase J8N08_19555 PF18327 Proline utilization A proline dehydrogenase N-terminal domain J8N08_19560 PF01037 Lrp/AsnC ligand binding domain J8N08_19565 PF08281 Sigma-70, region 4 J8N08_19565 PF04542 Sigma-70 region 2 J8N08_19575 PF00072 Response regulator receiver domain J8N08_19580 PF13426 PAS domain J8N08_19580 PF07536 HWE histidine kinase J8N08_19580 PF08447 PAS fold J8N08_19585 PF07536 HWE histidine kinase J8N08_19585 PF13426 PAS domain J8N08_19595 PF16363 GDP-mannose 4,6 dehydratase J8N08_19615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain J8N08_19620 PF03435 Saccharopine dehydrogenase NADP binding domain J8N08_19620 PF16653 Saccharopine dehydrogenase C-terminal domain J8N08_19625 PF00271 Helicase conserved C-terminal domain J8N08_19625 PF00270 DEAD/DEAH box helicase J8N08_19630 PF13840 ACT domain J8N08_19630 PF01842 ACT domain J8N08_19630 PF00696 Amino acid kinase family J8N08_19635 PF01590 GAF domain J8N08_19635 PF05524 PEP-utilising enzyme, N-terminal J8N08_19635 PF02896 PEP-utilising enzyme, TIM barrel domain J8N08_19635 PF00391 PEP-utilising enzyme, mobile domain J8N08_19640 PF00472 RF-1 domain J8N08_19640 PF03462 PCRF domain J8N08_19645 PF17827 PrmC N-terminal domain J8N08_19645 PF05175 Methyltransferase small domain J8N08_19655 PF10431 C-terminal, D2-small domain, of ClpB protein J8N08_19655 PF17871 AAA lid domain J8N08_19655 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_19655 PF07724 AAA domain (Cdc48 subfamily) J8N08_19655 PF02861 Clp amino terminal domain, pathogenicity island component J8N08_19660 PF01551 Peptidase family M23 J8N08_19660 PF10145 Phage-related minor tail protein J8N08_19660 PF01464 Transglycosylase SLT domain J8N08_19700 PF12327 FtsZ family, C-terminal domain J8N08_19700 PF00091 Tubulin/FtsZ family, GTPase domain J8N08_19705 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_19705 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_19720 PF00873 AcrB/AcrD/AcrF family J8N08_19725 PF00440 Bacterial regulatory proteins, tetR family J8N08_19730 PF00106 short chain dehydrogenase J8N08_19735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8N08_19740 PF00106 short chain dehydrogenase J8N08_19745 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_19745 PF00107 Zinc-binding dehydrogenase J8N08_19755 PF00384 Molybdopterin oxidoreductase J8N08_19760 PF07690 Major Facilitator Superfamily J8N08_19765 PF01494 FAD binding domain J8N08_19770 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_19780 PF00072 Response regulator receiver domain J8N08_19780 PF00196 Bacterial regulatory proteins, luxR family J8N08_19785 PF00196 Bacterial regulatory proteins, luxR family J8N08_19785 PF00072 Response regulator receiver domain J8N08_19790 PF00072 Response regulator receiver domain J8N08_19790 PF13426 PAS domain J8N08_19790 PF08448 PAS fold J8N08_19790 PF00512 His Kinase A (phospho-acceptor) domain J8N08_19790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_19795 PF00190 Cupin J8N08_19800 PF00210 Ferritin-like domain J8N08_19805 PF00561 alpha/beta hydrolase fold J8N08_19810 PF03466 LysR substrate binding domain J8N08_19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_19825 PF01047 MarR family J8N08_19835 PF00561 alpha/beta hydrolase fold J8N08_19840 PF04752 ChaC-like protein J8N08_19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_19845 PF03466 LysR substrate binding domain J8N08_19850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_19855 PF03466 LysR substrate binding domain J8N08_19870 PF07969 Amidohydrolase family J8N08_19890 PF10518 TAT (twin-arginine translocation) pathway signal sequence J8N08_19890 PF01799 [2Fe-2S] binding domain J8N08_19890 PF00111 2Fe-2S iron-sulfur cluster binding domain J8N08_19895 PF03450 CO dehydrogenase flavoprotein C-terminal domain J8N08_19895 PF00941 FAD binding domain in molybdopterin dehydrogenase J8N08_19900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain J8N08_19900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J8N08_19905 PF13478 XdhC Rossmann domain J8N08_19905 PF02625 XdhC and CoxI family J8N08_19910 PF12804 MobA-like NTP transferase domain J8N08_19910 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_19920 PF01965 DJ-1/PfpI family J8N08_19925 PF00563 EAL domain J8N08_19925 PF00990 Diguanylate cyclase, GGDEF domain J8N08_19925 PF03707 Bacterial signalling protein N terminal repeat J8N08_19930 PF00313 'Cold-shock' DNA-binding domain J8N08_19935 PF00571 CBS domain J8N08_19935 PF00005 ABC transporter J8N08_19940 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19955 PF00392 Bacterial regulatory proteins, gntR family J8N08_19955 PF07702 UTRA domain J8N08_19960 PF00221 Aromatic amino acid lyase J8N08_19980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_19980 PF00005 ABC transporter J8N08_19985 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19985 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_19990 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_19995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_20000 PF02203 Tar ligand binding domain homologue J8N08_20000 PF00672 HAMP domain J8N08_20000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_20010 PF00171 Aldehyde dehydrogenase family J8N08_20015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase J8N08_20015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase J8N08_20020 PF03466 LysR substrate binding domain J8N08_20020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_20025 PF07687 Peptidase dimerisation domain J8N08_20025 PF01546 Peptidase family M20/M25/M40 J8N08_20040 PF00392 Bacterial regulatory proteins, gntR family J8N08_20040 PF07729 FCD domain J8N08_20055 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20060 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20065 PF07470 Glycosyl Hydrolase Family 88 J8N08_20070 PF00005 ABC transporter J8N08_20070 PF03459 TOBE domain J8N08_20070 PF17912 MalK OB fold domain J8N08_20080 PF01547 Bacterial extracellular solute-binding protein J8N08_20090 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal J8N08_20090 PF14602 Hexapeptide repeat of succinyl-transferase J8N08_20090 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_20095 PF00563 EAL domain J8N08_20095 PF00990 Diguanylate cyclase, GGDEF domain J8N08_20095 PF03707 Bacterial signalling protein N terminal repeat J8N08_20095 PF13188 PAS domain J8N08_20115 PF00356 Bacterial regulatory proteins, lacI family J8N08_20125 PF00005 ABC transporter J8N08_20130 PF02653 Branched-chain amino acid transport system / permease component J8N08_20135 PF02126 Phosphotriesterase family J8N08_20145 PF00294 pfkB family carbohydrate kinase J8N08_20155 PF07687 Peptidase dimerisation domain J8N08_20155 PF01546 Peptidase family M20/M25/M40 J8N08_20160 PF02469 Fasciclin domain J8N08_20165 PF06434 Aconitate hydratase 2 N-terminus J8N08_20165 PF00330 Aconitase family (aconitate hydratase) J8N08_20165 PF11791 Aconitate B N-terminal domain J8N08_20175 PF00733 Asparagine synthase J8N08_20175 PF13537 Glutamine amidotransferase domain J8N08_20185 PF00501 AMP-binding enzyme J8N08_20185 PF13193 AMP-binding enzyme C-terminal domain J8N08_20190 PF02540 NAD synthase J8N08_20210 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8N08_20210 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_20210 PF17806 Sarcosine oxidase A3 domain J8N08_20210 PF01571 Aminomethyltransferase folate-binding domain J8N08_20215 PF04267 Sarcosine oxidase, delta subunit family J8N08_20220 PF01266 FAD dependent oxidoreductase J8N08_20225 PF01965 DJ-1/PfpI family J8N08_20225 PF12833 Helix-turn-helix domain J8N08_20230 PF00005 ABC transporter J8N08_20235 PF02653 Branched-chain amino acid transport system / permease component J8N08_20240 PF02653 Branched-chain amino acid transport system / permease component J8N08_20250 PF07729 FCD domain J8N08_20250 PF00392 Bacterial regulatory proteins, gntR family J8N08_20260 PF08125 Mannitol dehydrogenase C-terminal domain J8N08_20260 PF01232 Mannitol dehydrogenase Rossmann domain J8N08_20265 PF03786 D-mannonate dehydratase (UxuA) J8N08_20270 PF00248 Aldo/keto reductase family J8N08_20285 PF00440 Bacterial regulatory proteins, tetR family J8N08_20290 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_20290 PF00107 Zinc-binding dehydrogenase J8N08_20295 PF12833 Helix-turn-helix domain J8N08_20300 PF13407 Periplasmic binding protein domain J8N08_20305 PF00005 ABC transporter J8N08_20310 PF02653 Branched-chain amino acid transport system / permease component J8N08_20315 PF00106 short chain dehydrogenase J8N08_20320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_20320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_20330 PF08946 Osmosensory transporter coiled coil J8N08_20330 PF00083 Sugar (and other) transporter J8N08_20340 PF00459 Inositol monophosphatase family J8N08_20355 PF02690 Na+/Pi-cotransporter J8N08_20360 PF00356 Bacterial regulatory proteins, lacI family J8N08_20365 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20370 PF00005 ABC transporter J8N08_20370 PF08402 TOBE domain J8N08_20390 PF00459 Inositol monophosphatase family J8N08_20400 PF03471 Transporter associated domain J8N08_20400 PF03741 Integral membrane protein TerC family J8N08_20415 PF17912 MalK OB fold domain J8N08_20415 PF03459 TOBE domain J8N08_20415 PF00005 ABC transporter J8N08_20420 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20425 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20430 PF13416 Bacterial extracellular solute-binding protein J8N08_20435 PF01261 Xylose isomerase-like TIM barrel J8N08_20440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_20440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_20445 PF00356 Bacterial regulatory proteins, lacI family J8N08_20460 PF01266 FAD dependent oxidoreductase J8N08_20470 PF08669 Glycine cleavage T-protein C-terminal barrel domain J8N08_20470 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_20470 PF17806 Sarcosine oxidase A3 domain J8N08_20470 PF01571 Aminomethyltransferase folate-binding domain J8N08_20480 PF00464 Serine hydroxymethyltransferase J8N08_20485 PF00551 Formyl transferase J8N08_20490 PF00924 Mechanosensitive ion channel J8N08_20500 PF01740 STAS domain J8N08_20500 PF00916 Sulfate permease family J8N08_20515 PF01648 4'-phosphopantetheinyl transferase superfamily J8N08_20515 PF17837 4'-phosphopantetheinyl transferase N-terminal domain J8N08_20525 PF00857 Isochorismatase family J8N08_20525 PF00550 Phosphopantetheine attachment site J8N08_20530 PF00501 AMP-binding enzyme J8N08_20530 PF13193 AMP-binding enzyme C-terminal domain J8N08_20535 PF00425 chorismate binding enzyme J8N08_20540 PF00550 Phosphopantetheine attachment site J8N08_20540 PF00501 AMP-binding enzyme J8N08_20540 PF00668 Condensation domain J8N08_20540 PF13193 AMP-binding enzyme C-terminal domain J8N08_20545 PF00501 AMP-binding enzyme J8N08_20545 PF00550 Phosphopantetheine attachment site J8N08_20545 PF00975 Thioesterase domain J8N08_20545 PF00668 Condensation domain J8N08_20550 PF00668 Condensation domain J8N08_20550 PF13193 AMP-binding enzyme C-terminal domain J8N08_20550 PF00501 AMP-binding enzyme J8N08_20550 PF00550 Phosphopantetheine attachment site J8N08_20550 PF00975 Thioesterase domain J8N08_20560 PF04954 Siderophore-interacting protein J8N08_20560 PF08021 Siderophore-interacting FAD-binding domain J8N08_20570 PF01032 FecCD transport family J8N08_20575 PF01032 FecCD transport family J8N08_20580 PF00005 ABC transporter J8N08_20585 PF00296 Luciferase-like monooxygenase J8N08_20595 PF07715 TonB-dependent Receptor Plug Domain J8N08_20600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain J8N08_20600 PF02770 Acyl-CoA dehydrogenase, middle domain J8N08_20600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_20605 PF03466 LysR substrate binding domain J8N08_20605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_20610 PF00356 Bacterial regulatory proteins, lacI family J8N08_20620 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20630 PF00005 ABC transporter J8N08_20630 PF08402 TOBE domain J8N08_20640 PF13382 Adenine deaminase C-terminal domain J8N08_20640 PF01979 Amidohydrolase family J8N08_20645 PF07690 Major Facilitator Superfamily J8N08_20650 PF01546 Peptidase family M20/M25/M40 J8N08_20650 PF07687 Peptidase dimerisation domain J8N08_20660 PF01244 Membrane dipeptidase (Peptidase family M19) J8N08_20665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_20670 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20675 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_20675 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_20680 PF00005 ABC transporter J8N08_20685 PF00005 ABC transporter J8N08_20685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_20690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_20690 PF03466 LysR substrate binding domain J8N08_20695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_20700 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20705 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_20705 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20710 PF01425 Amidase J8N08_20715 PF01965 DJ-1/PfpI family J8N08_20725 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20725 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_20730 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_20740 PF07687 Peptidase dimerisation domain J8N08_20740 PF01546 Peptidase family M20/M25/M40 J8N08_20745 PF00005 ABC transporter J8N08_20745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_20750 PF04198 Putative sugar-binding domain J8N08_20760 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20765 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20770 PF00005 ABC transporter J8N08_20770 PF08402 TOBE domain J8N08_20775 PF01232 Mannitol dehydrogenase Rossmann domain J8N08_20775 PF08125 Mannitol dehydrogenase C-terminal domain J8N08_20780 PF13419 Haloacid dehalogenase-like hydrolase J8N08_20785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_20785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_20790 PF01418 Helix-turn-helix domain, rpiR family J8N08_20790 PF01380 SIS domain J8N08_20800 PF10576 Iron-sulfur binding domain of endonuclease III J8N08_20800 PF00633 Helix-hairpin-helix motif J8N08_20800 PF00730 HhH-GPD superfamily base excision DNA repair protein J8N08_20810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain J8N08_20810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain J8N08_20815 PF13936 Helix-turn-helix domain J8N08_20815 PF04198 Putative sugar-binding domain J8N08_20820 PF00923 Transaldolase/Fructose-6-phosphate aldolase J8N08_20825 PF09339 IclR helix-turn-helix domain J8N08_20825 PF01614 Bacterial transcriptional regulator J8N08_20835 PF07043 Protein of unknown function (DUF1328) J8N08_20840 PF00950 ABC 3 transport family J8N08_20845 PF00950 ABC 3 transport family J8N08_20850 PF00005 ABC transporter J8N08_20855 PF01297 Zinc-uptake complex component A periplasmic J8N08_20865 PF00152 tRNA synthetases class II (D, K and N) J8N08_20865 PF01336 OB-fold nucleic acid binding domain J8N08_20870 PF00749 tRNA synthetases class I (E and Q), catalytic domain J8N08_20875 PF03600 Citrate transporter J8N08_20875 PF02080 TrkA-C domain J8N08_20880 PF03741 Integral membrane protein TerC family J8N08_20880 PF03471 Transporter associated domain J8N08_20885 PF00440 Bacterial regulatory proteins, tetR family J8N08_20890 PF13533 Biotin-lipoyl like J8N08_20895 PF07690 Major Facilitator Superfamily J8N08_20900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J8N08_20900 PF00356 Bacterial regulatory proteins, lacI family J8N08_20905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_20905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_20910 PF01261 Xylose isomerase-like TIM barrel J8N08_20915 PF00232 Glycosyl hydrolase family 1 J8N08_20920 PF00881 Nitroreductase family J8N08_20925 PF09383 NIL domain J8N08_20925 PF00005 ABC transporter J8N08_20930 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_20935 PF03180 NLPA lipoprotein J8N08_20940 PF13188 PAS domain J8N08_20940 PF00563 EAL domain J8N08_20940 PF00990 Diguanylate cyclase, GGDEF domain J8N08_20940 PF03707 Bacterial signalling protein N terminal repeat J8N08_20945 PF17773 UPF0176 acylphosphatase like domain J8N08_20945 PF00581 Rhodanese-like domain J8N08_20955 PF01928 CYTH domain J8N08_20960 PF01081 KDPG and KHG aldolase J8N08_20980 PF03824 High-affinity nickel-transport protein J8N08_21000 PF13505 Outer membrane protein beta-barrel domain J8N08_21015 PF02492 CobW/HypB/UreG, nucleotide-binding domain J8N08_21015 PF07683 Cobalamin synthesis protein cobW C-terminal domain J8N08_21020 PF02633 Creatinine amidohydrolase J8N08_21025 PF01047 MarR family J8N08_21030 PF00356 Bacterial regulatory proteins, lacI family J8N08_21035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_21035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8N08_21040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_21040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_21045 PF04962 KduI/IolB family J8N08_21050 PF01261 Xylose isomerase-like TIM barrel J8N08_21055 PF00205 Thiamine pyrophosphate enzyme, central domain J8N08_21055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8N08_21055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8N08_21060 PF00294 pfkB family carbohydrate kinase J8N08_21070 PF00005 ABC transporter J8N08_21070 PF08402 TOBE domain J8N08_21075 PF00005 ABC transporter J8N08_21075 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_21090 PF13458 Periplasmic binding protein J8N08_21105 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21105 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_21110 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_21120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_21120 PF00005 ABC transporter J8N08_21130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily J8N08_21130 PF01261 Xylose isomerase-like TIM barrel J8N08_21140 PF01220 Dehydroquinase class II J8N08_21145 PF08501 Shikimate dehydrogenase substrate binding domain J8N08_21145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain J8N08_21150 PF00005 ABC transporter J8N08_21155 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_21160 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_21165 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21170 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21175 PF00206 Lyase J8N08_21175 PF10397 Adenylosuccinate lyase C-terminus J8N08_21180 PF00775 Dioxygenase J8N08_21185 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal J8N08_21185 PF00775 Dioxygenase J8N08_21190 PF02627 Carboxymuconolactone decarboxylase family J8N08_21200 PF03466 LysR substrate binding domain J8N08_21200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_21205 PF01494 FAD binding domain J8N08_21215 PF09339 IclR helix-turn-helix domain J8N08_21215 PF01614 Bacterial transcriptional regulator J8N08_21220 PF01144 Coenzyme A transferase J8N08_21225 PF01144 Coenzyme A transferase J8N08_21230 PF02803 Thiolase, C-terminal domain J8N08_21230 PF00108 Thiolase, N-terminal domain J8N08_21235 PF00356 Bacterial regulatory proteins, lacI family J8N08_21240 PF13407 Periplasmic binding protein domain J8N08_21245 PF01261 Xylose isomerase-like TIM barrel J8N08_21250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_21250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_21260 PF00356 Bacterial regulatory proteins, lacI family J8N08_21265 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21270 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21275 PF17912 MalK OB fold domain J8N08_21275 PF00005 ABC transporter J8N08_21285 PF07470 Glycosyl Hydrolase Family 88 J8N08_21305 PF00480 ROK family J8N08_21315 PF17912 MalK OB fold domain J8N08_21315 PF00005 ABC transporter J8N08_21320 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21325 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21330 PF03009 Glycerophosphoryl diester phosphodiesterase family J8N08_21335 PF00459 Inositol monophosphatase family J8N08_21340 PF00480 ROK family J8N08_21345 PF01547 Bacterial extracellular solute-binding protein J8N08_21350 PF00005 ABC transporter J8N08_21350 PF08402 TOBE domain J8N08_21355 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21375 PF01758 Sodium Bile acid symporter family J8N08_21390 PF00664 ABC transporter transmembrane region J8N08_21390 PF00005 ABC transporter J8N08_21400 PF08241 Methyltransferase domain J8N08_21405 PF08241 Methyltransferase domain J8N08_21410 PF01370 NAD dependent epimerase/dehydratase family J8N08_21420 PF00483 Nucleotidyl transferase J8N08_21425 PF04321 RmlD substrate binding domain J8N08_21430 PF16363 GDP-mannose 4,6 dehydratase J8N08_21435 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase J8N08_21445 PF01497 Periplasmic binding protein J8N08_21450 PF01032 FecCD transport family J8N08_21455 PF01032 FecCD transport family J8N08_21460 PF00005 ABC transporter J8N08_21465 PF07715 TonB-dependent Receptor Plug Domain J8N08_21470 PF11799 impB/mucB/samB family C-terminal domain J8N08_21470 PF00817 impB/mucB/samB family J8N08_21475 PF13361 UvrD-like helicase C-terminal domain J8N08_21475 PF00580 UvrD/REP helicase N-terminal domain J8N08_21485 PF00356 Bacterial regulatory proteins, lacI family J8N08_21490 PF01593 Flavin containing amine oxidoreductase J8N08_21500 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21505 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21510 PF00005 ABC transporter J8N08_21510 PF17912 MalK OB fold domain J8N08_21510 PF03459 TOBE domain J8N08_21515 PF00005 ABC transporter J8N08_21515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_21520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_21520 PF00005 ABC transporter J8N08_21525 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21525 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_21530 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21535 PF07729 FCD domain J8N08_21535 PF00392 Bacterial regulatory proteins, gntR family J8N08_21540 PF03786 D-mannonate dehydratase (UxuA) J8N08_21545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_21555 PF00563 EAL domain J8N08_21555 PF00990 Diguanylate cyclase, GGDEF domain J8N08_21555 PF13188 PAS domain J8N08_21555 PF03707 Bacterial signalling protein N terminal repeat J8N08_21570 PF02735 Ku70/Ku80 beta-barrel domain J8N08_21575 PF04679 ATP dependent DNA ligase C terminal region J8N08_21575 PF01068 ATP dependent DNA ligase domain J8N08_21575 PF13298 DNA polymerase Ligase (LigD) J8N08_21580 PF02735 Ku70/Ku80 beta-barrel domain J8N08_21585 PF01384 Phosphate transporter family J8N08_21590 PF01865 Protein of unknown function DUF47 J8N08_21600 PF17843 MycE methyltransferase N-terminal J8N08_21615 PF13533 Biotin-lipoyl like J8N08_21620 PF00072 Response regulator receiver domain J8N08_21620 PF00486 Transcriptional regulatory protein, C terminal J8N08_21625 PF00672 HAMP domain J8N08_21625 PF00512 His Kinase A (phospho-acceptor) domain J8N08_21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_21635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_21635 PF03466 LysR substrate binding domain J8N08_21640 PF00141 Peroxidase J8N08_21650 PF12833 Helix-turn-helix domain J8N08_21655 PF07715 TonB-dependent Receptor Plug Domain J8N08_21655 PF00593 TonB dependent receptor J8N08_21665 PF01032 FecCD transport family J8N08_21670 PF01032 FecCD transport family J8N08_21675 PF00005 ABC transporter J8N08_21680 PF01638 HxlR-like helix-turn-helix J8N08_21695 PF12833 Helix-turn-helix domain J8N08_21695 PF10114 Sensory domain found in PocR J8N08_21705 PF00171 Aldehyde dehydrogenase family J8N08_21710 PF03466 LysR substrate binding domain J8N08_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_21715 PF04069 Substrate binding domain of ABC-type glycine betaine transport system J8N08_21720 PF12411 Choline sulfatase enzyme C terminal J8N08_21720 PF00884 Sulfatase J8N08_21725 PF00294 pfkB family carbohydrate kinase J8N08_21730 PF00005 ABC transporter J8N08_21730 PF08402 TOBE domain J8N08_21735 PF14698 Argininosuccinate lyase C-terminal J8N08_21735 PF00206 Lyase J8N08_21740 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21745 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21750 PF13416 Bacterial extracellular solute-binding protein J8N08_21755 PF00480 ROK family J8N08_21780 PF02056 Family 4 glycosyl hydrolase J8N08_21780 PF11975 Family 4 glycosyl hydrolase C-terminal domain J8N08_21785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_21790 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21795 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21795 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_21800 PF00005 ABC transporter J8N08_21800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_21805 PF02056 Family 4 glycosyl hydrolase J8N08_21805 PF11975 Family 4 glycosyl hydrolase C-terminal domain J8N08_21820 PF00072 Response regulator receiver domain J8N08_21825 PF00091 Tubulin/FtsZ family, GTPase domain J8N08_21825 PF12327 FtsZ family, C-terminal domain J8N08_21830 PF07729 FCD domain J8N08_21830 PF00392 Bacterial regulatory proteins, gntR family J8N08_21835 PF00701 Dihydrodipicolinate synthetase family J8N08_21840 PF02615 Malate/L-lactate dehydrogenase J8N08_21850 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21855 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21860 PF00005 ABC transporter J8N08_21865 PF01266 FAD dependent oxidoreductase J8N08_21875 PF05544 Proline racemase J8N08_21880 PF00356 Bacterial regulatory proteins, lacI family J8N08_21890 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_21895 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21900 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21905 PF00005 ABC transporter J8N08_21910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain J8N08_21910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain J8N08_21915 PF03707 Bacterial signalling protein N terminal repeat J8N08_21915 PF00990 Diguanylate cyclase, GGDEF domain J8N08_21915 PF00563 EAL domain J8N08_21920 PF02530 Porin subfamily J8N08_21925 PF01979 Amidohydrolase family J8N08_21930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_21935 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21940 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_21940 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_21945 PF01979 Amidohydrolase family J8N08_21950 PF01979 Amidohydrolase family J8N08_21955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_21955 PF00005 ABC transporter J8N08_21960 PF00005 ABC transporter J8N08_21960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_21965 PF00392 Bacterial regulatory proteins, gntR family J8N08_21965 PF07729 FCD domain J8N08_21970 PF01613 Flavin reductase like domain J8N08_21975 PF01177 Asp/Glu/Hydantoin racemase J8N08_21980 PF03466 LysR substrate binding domain J8N08_21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_21990 PF00037 4Fe-4S binding domain J8N08_21990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region J8N08_21990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit J8N08_21995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region J8N08_21995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain J8N08_21995 PF12838 4Fe-4S dicluster domain J8N08_21995 PF00384 Molybdopterin oxidoreductase J8N08_21995 PF01568 Molydopterin dinucleotide binding domain J8N08_22005 PF07690 Major Facilitator Superfamily J8N08_22010 PF13673 Acetyltransferase (GNAT) domain J8N08_22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_22020 PF00072 Response regulator receiver domain J8N08_22020 PF00486 Transcriptional regulatory protein, C terminal J8N08_22040 PF05532 CsbD-like J8N08_22045 PF00196 Bacterial regulatory proteins, luxR family J8N08_22045 PF00072 Response regulator receiver domain J8N08_22050 PF03401 Tripartite tricarboxylate transporter family receptor J8N08_22055 PF00664 ABC transporter transmembrane region J8N08_22055 PF00005 ABC transporter J8N08_22075 PF18011 C-terminal domain found in long catalases J8N08_22075 PF06628 Catalase-related immune-responsive J8N08_22075 PF00199 Catalase J8N08_22130 PF07992 Pyridine nucleotide-disulphide oxidoreductase J8N08_22130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family J8N08_22145 PF01590 GAF domain J8N08_22145 PF00563 EAL domain J8N08_22145 PF00360 Phytochrome region J8N08_22145 PF00990 Diguanylate cyclase, GGDEF domain J8N08_22160 PF04244 Deoxyribodipyrimidine photo-lyase-related protein J8N08_22195 PF00285 Citrate synthase, C-terminal domain J8N08_22200 PF00285 Citrate synthase, C-terminal domain J8N08_22215 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_22215 PF08659 KR domain J8N08_22215 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_22215 PF00698 Acyl transferase domain J8N08_22215 PF00550 Phosphopantetheine attachment site J8N08_22215 PF14765 Polyketide synthase dehydratase J8N08_22215 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_22215 PF16197 Ketoacyl-synthetase C-terminal extension J8N08_22220 PF00155 Aminotransferase class I and II J8N08_22225 PF00106 short chain dehydrogenase J8N08_22230 PF00884 Sulfatase J8N08_22235 PF05159 Capsule polysaccharide biosynthesis protein J8N08_22240 PF00535 Glycosyl transferase family 2 J8N08_22260 PF00005 ABC transporter J8N08_22285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain J8N08_22285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain J8N08_22285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain J8N08_22295 PF14307 Glycosyltransferase WbsX J8N08_22295 PF05045 Rhamnan synthesis protein F J8N08_22305 PF01507 Phosphoadenosine phosphosulfate reductase family J8N08_22310 PF00009 Elongation factor Tu GTP binding domain J8N08_22330 PF04542 Sigma-70 region 2 J8N08_22330 PF08281 Sigma-70, region 4 J8N08_22345 PF00440 Bacterial regulatory proteins, tetR family J8N08_22360 PF00669 Bacterial flagellin N-terminal helical region J8N08_22360 PF00700 Bacterial flagellin C-terminal helical region J8N08_22380 PF00005 ABC transporter J8N08_22385 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_22390 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_22395 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_22400 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family J8N08_22405 PF00557 Metallopeptidase family M24 J8N08_22405 PF01321 Creatinase/Prolidase N-terminal domain J8N08_22410 PF02423 Ornithine cyclodeaminase/mu-crystallin family J8N08_22415 PF00291 Pyridoxal-phosphate dependent enzyme J8N08_22420 PF00392 Bacterial regulatory proteins, gntR family J8N08_22420 PF00155 Aminotransferase class I and II J8N08_22425 PF00202 Aminotransferase class-III J8N08_22430 PF00171 Aldehyde dehydrogenase family J8N08_22435 PF01037 Lrp/AsnC ligand binding domain J8N08_22470 PF02308 MgtC family J8N08_22475 PF03389 MobA/MobL family J8N08_22475 PF17841 BID domain of Bartonella effector protein (Bep) J8N08_22475 PF01443 Viral (Superfamily 1) RNA helicase J8N08_22535 PF13649 Methyltransferase domain J8N08_22550 PF00144 Beta-lactamase J8N08_22555 PF07690 Major Facilitator Superfamily J8N08_22560 PF03466 LysR substrate binding domain J8N08_22560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_22580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_22585 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_22590 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_22590 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_22595 PF00005 ABC transporter J8N08_22595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_22610 PF03737 Aldolase/RraA J8N08_22630 PF00392 Bacterial regulatory proteins, gntR family J8N08_22630 PF07729 FCD domain J8N08_22640 PF13505 Outer membrane protein beta-barrel domain J8N08_22650 PF00300 Histidine phosphatase superfamily (branch 1) J8N08_22670 PF07804 HipA-like C-terminal domain J8N08_22670 PF13657 HipA N-terminal domain J8N08_22720 PF13614 AAA domain J8N08_22720 PF00376 MerR family regulatory protein J8N08_22725 PF07506 RepB plasmid partitioning protein J8N08_22725 PF02195 ParB-like nuclease domain J8N08_22730 PF11800 Replication protein C C-terminal region J8N08_22730 PF03428 Replication protein C N-terminal domain J8N08_22735 PF02515 CoA-transferase family III J8N08_22740 PF00732 GMC oxidoreductase J8N08_22740 PF05199 GMC oxidoreductase J8N08_22745 PF03466 LysR substrate binding domain J8N08_22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_22775 PF03466 LysR substrate binding domain J8N08_22775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_22795 PF00106 short chain dehydrogenase J8N08_22800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_22800 PF03466 LysR substrate binding domain J8N08_22820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_22820 PF03466 LysR substrate binding domain J8N08_22830 PF12852 Cupin J8N08_22830 PF12833 Helix-turn-helix domain J8N08_22835 PF00106 short chain dehydrogenase J8N08_22850 PF12728 Helix-turn-helix domain J8N08_22850 PF02661 Fic/DOC family J8N08_22860 PF03328 HpcH/HpaI aldolase/citrate lyase family J8N08_22865 PF01557 Fumarylacetoacetate (FAA) hydrolase family J8N08_22870 PF04444 Catechol dioxygenase N terminus J8N08_22870 PF00775 Dioxygenase J8N08_22895 PF07756 Protein of unknown function (DUF1612) J8N08_22895 PF11972 HTH DNA binding domain J8N08_22930 PF00004 ATPase family associated with various cellular activities (AAA) J8N08_22955 PF12697 Alpha/beta hydrolase family J8N08_22960 PF03928 Haem-degrading J8N08_22970 PF00561 alpha/beta hydrolase fold J8N08_22980 PF07690 Major Facilitator Superfamily J8N08_22985 PF00106 short chain dehydrogenase J8N08_22990 PF00561 alpha/beta hydrolase fold J8N08_22990 PF08386 TAP-like protein J8N08_22995 PF01965 DJ-1/PfpI family J8N08_23000 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_23000 PF00107 Zinc-binding dehydrogenase J8N08_23005 PF03595 Voltage-dependent anion channel J8N08_23010 PF00248 Aldo/keto reductase family J8N08_23015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase J8N08_23020 PF01799 [2Fe-2S] binding domain J8N08_23020 PF00111 2Fe-2S iron-sulfur cluster binding domain J8N08_23025 PF00034 Cytochrome c J8N08_23030 PF00561 alpha/beta hydrolase fold J8N08_23035 PF00196 Bacterial regulatory proteins, luxR family J8N08_23040 PF02311 AraC-like ligand binding domain J8N08_23040 PF12833 Helix-turn-helix domain J8N08_23050 PF00999 Sodium/hydrogen exchanger family J8N08_23050 PF02254 TrkA-N domain J8N08_23055 PF02525 Flavodoxin-like fold J8N08_23060 PF02625 XdhC and CoxI family J8N08_23060 PF13478 XdhC Rossmann domain J8N08_23065 PF00132 Bacterial transferase hexapeptide (six repeats) J8N08_23065 PF12804 MobA-like NTP transferase domain J8N08_23065 PF14602 Hexapeptide repeat of succinyl-transferase J8N08_23070 PF00929 Exonuclease J8N08_23110 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH J8N08_23135 PF02769 AIR synthase related protein, C-terminal domain J8N08_23135 PF00586 AIR synthase related protein, N-terminal domain J8N08_23145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family J8N08_23145 PF04055 Radical SAM superfamily J8N08_23150 PF00795 Carbon-nitrogen hydrolase J8N08_23160 PF00392 Bacterial regulatory proteins, gntR family J8N08_23160 PF00155 Aminotransferase class I and II J8N08_23175 PF01695 IstB-like ATP binding protein J8N08_23180 PF00665 Integrase core domain J8N08_23190 PF07694 5TMR of 5TMR-LYT J8N08_23190 PF00990 Diguanylate cyclase, GGDEF domain J8N08_23195 PF00106 short chain dehydrogenase J8N08_23200 PF03472 Autoinducer binding domain J8N08_23200 PF00196 Bacterial regulatory proteins, luxR family J8N08_23250 PF07729 FCD domain J8N08_23250 PF00392 Bacterial regulatory proteins, gntR family J8N08_23260 PF07478 D-ala D-ala ligase C-terminus J8N08_23260 PF01820 D-ala D-ala ligase N-terminus J8N08_23275 PF01850 PIN domain J8N08_23280 PF09957 Bacterial antitoxin of type II TA system, VapB J8N08_23285 PF02311 AraC-like ligand binding domain J8N08_23285 PF12833 Helix-turn-helix domain J8N08_23300 PF00561 alpha/beta hydrolase fold J8N08_23320 PF00196 Bacterial regulatory proteins, luxR family J8N08_23330 PF00857 Isochorismatase family J8N08_23335 PF00561 alpha/beta hydrolase fold J8N08_23345 PF00561 alpha/beta hydrolase fold J8N08_23355 PF00106 short chain dehydrogenase J8N08_23360 PF02627 Carboxymuconolactone decarboxylase family J8N08_23370 PF05368 NmrA-like family J8N08_23375 PF02082 Transcriptional regulator J8N08_23380 PF00440 Bacterial regulatory proteins, tetR family J8N08_23395 PF00440 Bacterial regulatory proteins, tetR family J8N08_23405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain J8N08_23405 PF00672 HAMP domain J8N08_23425 PF04679 ATP dependent DNA ligase C terminal region J8N08_23425 PF01068 ATP dependent DNA ligase domain J8N08_23425 PF13298 DNA polymerase Ligase (LigD) J8N08_23440 PF14579 Helix-hairpin-helix motif J8N08_23440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain J8N08_23440 PF07733 Bacterial DNA polymerase III alpha NTPase domain J8N08_23440 PF02811 PHP domain J8N08_23450 PF00106 short chain dehydrogenase J8N08_23460 PF02899 Phage integrase, N-terminal SAM-like domain J8N08_23460 PF00589 Phage integrase family J8N08_23470 PF02899 Phage integrase, N-terminal SAM-like domain J8N08_23470 PF00589 Phage integrase family J8N08_23490 PF01638 HxlR-like helix-turn-helix J8N08_23515 PF05284 Protein of unknown function (DUF736) J8N08_23525 PF00216 Bacterial DNA-binding protein J8N08_23530 PF05406 WGR domain J8N08_23535 PF02534 Type IV secretory system Conjugative DNA transfer J8N08_23550 PF03389 MobA/MobL family J8N08_23550 PF17841 BID domain of Bartonella effector protein (Bep) J8N08_23550 PF01443 Viral (Superfamily 1) RNA helicase J8N08_23580 PF12833 Helix-turn-helix domain J8N08_23595 PF02254 TrkA-N domain J8N08_23595 PF00999 Sodium/hydrogen exchanger family J8N08_23655 PF00155 Aminotransferase class I and II J8N08_23660 PF00072 Response regulator receiver domain J8N08_23660 PF00486 Transcriptional regulatory protein, C terminal J8N08_23665 PF00072 Response regulator receiver domain J8N08_23665 PF00486 Transcriptional regulatory protein, C terminal J8N08_23675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8N08_23675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8N08_23675 PF00205 Thiamine pyrophosphate enzyme, central domain J8N08_23680 PF00202 Aminotransferase class-III J8N08_23690 PF00005 ABC transporter J8N08_23690 PF08402 TOBE domain J8N08_23695 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_23705 PF13416 Bacterial extracellular solute-binding protein J8N08_23710 PF00005 ABC transporter J8N08_23715 PF02687 FtsX-like permease family J8N08_23715 PF12704 MacB-like periplasmic core domain J8N08_23725 PF09339 IclR helix-turn-helix domain J8N08_23725 PF01614 Bacterial transcriptional regulator J8N08_23730 PF00171 Aldehyde dehydrogenase family J8N08_23735 PF00465 Iron-containing alcohol dehydrogenase J8N08_23740 PF00753 Metallo-beta-lactamase superfamily J8N08_23770 PF02308 MgtC family J8N08_23790 PF00300 Histidine phosphatase superfamily (branch 1) J8N08_23810 PF00768 D-alanyl-D-alanine carboxypeptidase J8N08_23810 PF07943 Penicillin-binding protein 5, C-terminal domain J8N08_23820 PF00905 Penicillin binding protein transpeptidase domain J8N08_23820 PF03717 Penicillin-binding Protein dimerisation domain J8N08_23825 PF17092 Penicillin-binding protein OB-like domain J8N08_23825 PF00905 Penicillin binding protein transpeptidase domain J8N08_23825 PF00912 Transglycosylase J8N08_23830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_23830 PF03466 LysR substrate binding domain J8N08_23840 PF00106 short chain dehydrogenase J8N08_23845 PF00196 Bacterial regulatory proteins, luxR family J8N08_23850 PF00561 alpha/beta hydrolase fold J8N08_23855 PF00857 Isochorismatase family J8N08_23870 PF03466 LysR substrate binding domain J8N08_23870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_23875 PF16925 Tetracyclin repressor-like, C-terminal domain J8N08_23875 PF00440 Bacterial regulatory proteins, tetR family J8N08_23910 PF04956 TrbC/VIRB2 family J8N08_23915 PF05101 Type IV secretory pathway, VirB3-like protein J8N08_23920 PF03135 CagE, TrbE, VirB family, component of type IV transporter system J8N08_23925 PF07996 Type IV secretion system proteins J8N08_23935 PF04610 TrbL/VirB6 plasmid conjugal transfer protein J8N08_23945 PF04335 VirB8 protein J8N08_23950 PF03524 Conjugal transfer protein J8N08_23955 PF03743 Bacterial conjugation TrbI-like protein J8N08_23960 PF00437 Type II/IV secretion system protein J8N08_23965 PF01022 Bacterial regulatory protein, arsR family J8N08_23975 PF14760 Rnk N-terminus J8N08_23975 PF01272 Transcription elongation factor, GreA/GreB, C-term J8N08_23980 PF01272 Transcription elongation factor, GreA/GreB, C-term J8N08_23980 PF14760 Rnk N-terminus J8N08_23990 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase J8N08_23990 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain J8N08_24010 PF00072 Response regulator receiver domain J8N08_24010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_24010 PF13426 PAS domain J8N08_24015 PF08447 PAS fold J8N08_24015 PF07536 HWE histidine kinase J8N08_24015 PF13426 PAS domain J8N08_24020 PF00226 DnaJ domain J8N08_24030 PF01850 PIN domain J8N08_24035 PF00701 Dihydrodipicolinate synthetase family J8N08_24040 PF08450 SMP-30/Gluconolactonase/LRE-like region J8N08_24045 PF07729 FCD domain J8N08_24045 PF00392 Bacterial regulatory proteins, gntR family J8N08_24050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_24055 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_24060 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_24060 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_24065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_24065 PF00005 ABC transporter J8N08_24070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_24070 PF13378 Enolase C-terminal domain-like J8N08_24110 PF08281 Sigma-70, region 4 J8N08_24110 PF04542 Sigma-70 region 2 J8N08_24120 PF07715 TonB-dependent Receptor Plug Domain J8N08_24120 PF07660 Secretin and TonB N terminus short domain J8N08_24120 PF00593 TonB dependent receptor J8N08_24125 PF01497 Periplasmic binding protein J8N08_24135 PF01032 FecCD transport family J8N08_24140 PF01032 FecCD transport family J8N08_24145 PF00005 ABC transporter J8N08_24155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component J8N08_24160 PF03480 Bacterial extracellular solute-binding protein, family 7 J8N08_24165 PF00072 Response regulator receiver domain J8N08_24165 PF00196 Bacterial regulatory proteins, luxR family J8N08_24170 PF07730 Histidine kinase J8N08_24170 PF17200 Single Cache domain 2 J8N08_24175 PF06965 Na+/H+ antiporter 1 J8N08_24205 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_24210 PF00005 ABC transporter J8N08_24210 PF08402 TOBE domain J8N08_24215 PF00459 Inositol monophosphatase family J8N08_24220 PF01594 AI-2E family transporter J8N08_24235 PF05035 2-keto-3-deoxy-galactonokinase J8N08_24240 PF00701 Dihydrodipicolinate synthetase family J8N08_24245 PF13378 Enolase C-terminal domain-like J8N08_24245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain J8N08_24255 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_24260 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_24265 PF00005 ABC transporter J8N08_24265 PF17912 MalK OB fold domain J8N08_24275 PF09339 IclR helix-turn-helix domain J8N08_24275 PF01614 Bacterial transcriptional regulator J8N08_24285 PF02311 AraC-like ligand binding domain J8N08_24285 PF12833 Helix-turn-helix domain J8N08_24295 PF03466 LysR substrate binding domain J8N08_24295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_24300 PF00248 Aldo/keto reductase family J8N08_24315 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_24315 PF00107 Zinc-binding dehydrogenase J8N08_24320 PF12833 Helix-turn-helix domain J8N08_24320 PF12852 Cupin J8N08_24325 PF00106 short chain dehydrogenase J8N08_24330 PF13533 Biotin-lipoyl like J8N08_24335 PF00005 ABC transporter J8N08_24345 PF02321 Outer membrane efflux protein J8N08_24365 PF00892 EamA-like transporter family J8N08_24375 PF00202 Aminotransferase class-III J8N08_24385 PF00072 Response regulator receiver domain J8N08_24385 PF00486 Transcriptional regulatory protein, C terminal J8N08_24390 PF00672 HAMP domain J8N08_24390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_24390 PF00512 His Kinase A (phospho-acceptor) domain J8N08_24400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8N08_24405 PF02687 FtsX-like permease family J8N08_24405 PF00005 ABC transporter J8N08_24405 PF12704 MacB-like periplasmic core domain J8N08_24410 PF00583 Acetyltransferase (GNAT) family J8N08_24420 PF07690 Major Facilitator Superfamily J8N08_24430 PF00529 HlyD membrane-fusion protein of T1SS J8N08_24430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion J8N08_24435 PF00873 AcrB/AcrD/AcrF family J8N08_24445 PF00005 ABC transporter J8N08_24450 PF01032 FecCD transport family J8N08_24460 PF00356 Bacterial regulatory proteins, lacI family J8N08_24460 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family J8N08_24465 PF01261 Xylose isomerase-like TIM barrel J8N08_24470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_24470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_24475 PF01261 Xylose isomerase-like TIM barrel J8N08_24490 PF00005 ABC transporter J8N08_24495 PF01032 FecCD transport family J8N08_24505 PF07715 TonB-dependent Receptor Plug Domain J8N08_24505 PF00593 TonB dependent receptor J8N08_24525 PF03170 Bacterial cellulose synthase subunit J8N08_24525 PF00535 Glycosyl transferase family 2 J8N08_24525 PF07238 PilZ domain J8N08_24540 PF08267 Cobalamin-independent synthase, N-terminal domain J8N08_24540 PF01717 Cobalamin-independent synthase, Catalytic domain J8N08_24550 PF00106 short chain dehydrogenase J8N08_24555 PF04198 Putative sugar-binding domain J8N08_24560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain J8N08_24560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain J8N08_24565 PF02780 Transketolase, C-terminal domain J8N08_24565 PF02779 Transketolase, pyrimidine binding domain J8N08_24570 PF00456 Transketolase, thiamine diphosphate binding domain J8N08_24575 PF02653 Branched-chain amino acid transport system / permease component J8N08_24580 PF13407 Periplasmic binding protein domain J8N08_24585 PF00005 ABC transporter J8N08_24595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase J8N08_24600 PF13505 Outer membrane protein beta-barrel domain J8N08_24620 PF00190 Cupin J8N08_24625 PF02311 AraC-like ligand binding domain J8N08_24625 PF12833 Helix-turn-helix domain J8N08_24630 PF12833 Helix-turn-helix domain J8N08_24660 PF13180 PDZ domain J8N08_24675 PF01226 Formate/nitrite transporter J8N08_24680 PF00190 Cupin J8N08_24690 PF13493 Domain of unknown function (DUF4118) J8N08_24690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_24690 PF00512 His Kinase A (phospho-acceptor) domain J8N08_24690 PF00989 PAS fold J8N08_24690 PF08447 PAS fold J8N08_24690 PF13426 PAS domain J8N08_24695 PF00196 Bacterial regulatory proteins, luxR family J8N08_24695 PF00072 Response regulator receiver domain J8N08_24700 PF00196 Bacterial regulatory proteins, luxR family J8N08_24700 PF00072 Response regulator receiver domain J8N08_24705 PF04055 Radical SAM superfamily J8N08_24705 PF06463 Molybdenum Cofactor Synthesis C J8N08_24710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_24710 PF03466 LysR substrate binding domain J8N08_24720 PF14765 Polyketide synthase dehydratase J8N08_24720 PF00698 Acyl transferase domain J8N08_24720 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_24720 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_24720 PF00550 Phosphopantetheine attachment site J8N08_24720 PF08659 KR domain J8N08_24720 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_24720 PF08990 Erythronolide synthase docking J8N08_24720 PF16197 Ketoacyl-synthetase C-terminal extension J8N08_24725 PF00881 Nitroreductase family J8N08_24730 PF00999 Sodium/hydrogen exchanger family J8N08_24735 PF00296 Luciferase-like monooxygenase J8N08_24740 PF00296 Luciferase-like monooxygenase J8N08_24745 PF00072 Response regulator receiver domain J8N08_24750 PF02634 FdhD/NarQ family J8N08_24760 PF00384 Molybdopterin oxidoreductase J8N08_24765 PF00873 AcrB/AcrD/AcrF family J8N08_24770 PF13533 Biotin-lipoyl like J8N08_24835 PF13533 Biotin-lipoyl like J8N08_24850 PF08448 PAS fold J8N08_24850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_24850 PF08447 PAS fold J8N08_24860 PF01654 Cytochrome bd terminal oxidase subunit I J8N08_24865 PF02322 Cytochrome bd terminal oxidase subunit II J8N08_24875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain J8N08_24875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain J8N08_24875 PF00205 Thiamine pyrophosphate enzyme, central domain J8N08_24880 PF00989 PAS fold J8N08_24880 PF13493 Domain of unknown function (DUF4118) J8N08_24880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_24880 PF00512 His Kinase A (phospho-acceptor) domain J8N08_24880 PF13426 PAS domain J8N08_24880 PF08447 PAS fold J8N08_24895 PF02627 Carboxymuconolactone decarboxylase family J8N08_24915 PF00106 short chain dehydrogenase J8N08_24935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_24935 PF03466 LysR substrate binding domain J8N08_24945 PF00072 Response regulator receiver domain J8N08_24945 PF13188 PAS domain J8N08_24945 PF08448 PAS fold J8N08_24945 PF00512 His Kinase A (phospho-acceptor) domain J8N08_24945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_24950 PF06745 KaiC J8N08_24955 PF17954 Quercetinase C-terminal cupin domain J8N08_24955 PF02678 Pirin J8N08_24960 PF00857 Isochorismatase family J8N08_24965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_24965 PF03466 LysR substrate binding domain J8N08_24970 PF01638 HxlR-like helix-turn-helix J8N08_24975 PF00550 Phosphopantetheine attachment site J8N08_24975 PF14765 Polyketide synthase dehydratase J8N08_24975 PF08659 KR domain J8N08_24975 PF02801 Beta-ketoacyl synthase, C-terminal domain J8N08_24975 PF00109 Beta-ketoacyl synthase, N-terminal domain J8N08_24975 PF16197 Ketoacyl-synthetase C-terminal extension J8N08_24975 PF00107 Zinc-binding dehydrogenase J8N08_24975 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_24975 PF00698 Acyl transferase domain J8N08_24980 PF03466 LysR substrate binding domain J8N08_24980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_25000 PF00970 Oxidoreductase FAD-binding domain J8N08_25000 PF00175 Oxidoreductase NAD-binding domain J8N08_25000 PF00042 Globin J8N08_25005 PF02798 Glutathione S-transferase, N-terminal domain J8N08_25010 PF00171 Aldehyde dehydrogenase family J8N08_25015 PF03466 LysR substrate binding domain J8N08_25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_25040 PF00455 DeoR C terminal sensor domain J8N08_25040 PF08220 DeoR-like helix-turn-helix domain J8N08_25045 PF13407 Periplasmic binding protein domain J8N08_25050 PF00005 ABC transporter J8N08_25055 PF02653 Branched-chain amino acid transport system / permease component J8N08_25060 PF02653 Branched-chain amino acid transport system / permease component J8N08_25070 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) J8N08_25070 PF00294 pfkB family carbohydrate kinase J8N08_25075 PF01791 DeoC/LacD family aldolase J8N08_25080 PF00171 Aldehyde dehydrogenase family J8N08_25090 PF00795 Carbon-nitrogen hydrolase J8N08_25095 PF00005 ABC transporter J8N08_25095 PF09383 NIL domain J8N08_25100 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_25100 PF00005 ABC transporter J8N08_25110 PF02653 Branched-chain amino acid transport system / permease component J8N08_25115 PF13458 Periplasmic binding protein J8N08_25145 PF00924 Mechanosensitive ion channel J8N08_25160 PF13533 Biotin-lipoyl like J8N08_25175 PF12833 Helix-turn-helix domain J8N08_25175 PF06719 AraC-type transcriptional regulator N-terminus J8N08_25185 PF05985 Ethanolamine ammonia-lyase light chain (EutC) J8N08_25190 PF06751 Ethanolamine ammonia lyase large subunit (EutB) J8N08_25195 PF00459 Inositol monophosphatase family J8N08_25210 PF01546 Peptidase family M20/M25/M40 J8N08_25215 PF00455 DeoR C terminal sensor domain J8N08_25215 PF08220 DeoR-like helix-turn-helix domain J8N08_25220 PF00005 ABC transporter J8N08_25220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region J8N08_25225 PF12911 N-terminal TM domain of oligopeptide transport permease C J8N08_25225 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_25230 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_25235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_25245 PF00005 ABC transporter J8N08_25245 PF17912 MalK OB fold domain J8N08_25250 PF08240 Alcohol dehydrogenase GroES-like domain J8N08_25250 PF00107 Zinc-binding dehydrogenase J8N08_25255 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_25260 PF00528 Binding-protein-dependent transport system inner membrane component J8N08_25265 PF01547 Bacterial extracellular solute-binding protein J8N08_25280 PF12833 Helix-turn-helix domain J8N08_25285 PF00593 TonB dependent receptor J8N08_25285 PF07715 TonB-dependent Receptor Plug Domain J8N08_25295 PF00183 Hsp90 protein J8N08_25300 PF13649 Methyltransferase domain J8N08_25305 PF01161 Phosphatidylethanolamine-binding protein J8N08_25315 PF00005 ABC transporter J8N08_25315 PF00664 ABC transporter transmembrane region J8N08_25320 PF12900 Pyridoxamine 5'-phosphate oxidase J8N08_25340 PF00011 Hsp20/alpha crystallin family J8N08_25350 PF00403 Heavy-metal-associated domain J8N08_25355 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase J8N08_25355 PF09363 XFP C-terminal domain J8N08_25355 PF09364 XFP N-terminal domain J8N08_25360 PF00871 Acetokinase family J8N08_25370 PF00486 Transcriptional regulatory protein, C terminal J8N08_25370 PF00072 Response regulator receiver domain J8N08_25375 PF00027 Cyclic nucleotide-binding domain J8N08_25375 PF00325 Bacterial regulatory proteins, crp family J8N08_25380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase J8N08_25380 PF13426 PAS domain J8N08_25380 PF00072 Response regulator receiver domain J8N08_25400 PF13936 Helix-turn-helix domain J8N08_25400 PF00665 Integrase core domain J8N08_25420 PF03328 HpcH/HpaI aldolase/citrate lyase family J8N08_25435 PF01968 Hydantoinase/oxoprolinase J8N08_25435 PF05378 Hydantoinase/oxoprolinase N-terminal region J8N08_25440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_25440 PF03466 LysR substrate binding domain J8N08_25445 PF00155 Aminotransferase class I and II J8N08_25450 PF00005 ABC transporter J8N08_25455 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_25455 PF00005 ABC transporter J8N08_25460 PF02653 Branched-chain amino acid transport system / permease component J8N08_25465 PF02653 Branched-chain amino acid transport system / permease component J8N08_25470 PF13458 Periplasmic binding protein J8N08_25485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle J8N08_25490 PF00881 Nitroreductase family J8N08_25495 PF01979 Amidohydrolase family J8N08_25505 PF11862 Domain of unknown function (DUF3382) J8N08_25505 PF02653 Branched-chain amino acid transport system / permease component J8N08_25510 PF02653 Branched-chain amino acid transport system / permease component J8N08_25515 PF13458 Periplasmic binding protein J8N08_25520 PF00005 ABC transporter J8N08_25525 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_25525 PF00005 ABC transporter J8N08_25530 PF00440 Bacterial regulatory proteins, tetR family J8N08_25535 PF03466 LysR substrate binding domain J8N08_25535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_25540 PF00248 Aldo/keto reductase family J8N08_25555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain J8N08_25555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain J8N08_25560 PF00005 ABC transporter J8N08_25570 PF02653 Branched-chain amino acid transport system / permease component J8N08_25580 PF12399 Branched-chain amino acid ATP-binding cassette transporter J8N08_25580 PF00005 ABC transporter J8N08_25585 PF00296 Luciferase-like monooxygenase J8N08_25590 PF03358 NADPH-dependent FMN reductase J8N08_25595 PF03466 LysR substrate binding domain J8N08_25595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family J8N08_25620 PF00313 'Cold-shock' DNA-binding domain J8N08_25630 PF08245 Mur ligase middle domain J8N08_25630 PF02875 Mur ligase family, glutamate ligase domain J8N08_25630 PF01225 Mur ligase family, catalytic domain J8N08_25635 PF13533 Biotin-lipoyl like J8N08_25640 PF00664 ABC transporter transmembrane region J8N08_25640 PF00005 ABC transporter J8N08_25640 PF03412 Peptidase C39 family J8N08_25650 PF02321 Outer membrane efflux protein J8N08_25665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold J8N08_25665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain J8N08_25670 PF00005 ABC transporter J8N08_25675 PF00497 Bacterial extracellular solute-binding proteins, family 3 J8N08_25680 PF00356 Bacterial regulatory proteins, lacI family