locus-tag class description FY128_00005 PF00308 Bacterial dnaA protein FY128_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY128_00005 PF11638 DnaA N-terminal domain FY128_00010 PF06969 HemN C-terminal domain FY128_00010 PF04055 Radical SAM superfamily FY128_00015 PF01725 Ham1 family FY128_00020 PF01138 3' exoribonuclease family, domain 1 FY128_00020 PF03725 3' exoribonuclease family, domain 2 FY128_00025 PF01628 HrcA protein C terminal domain FY128_00030 PF01025 GrpE FY128_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY128_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY128_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY128_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY128_00045 PF04963 Sigma-54 factor, core binding domain FY128_00045 PF04552 Sigma-54, DNA binding domain FY128_00050 PF00005 ABC transporter FY128_00055 PF03968 OstA-like protein FY128_00065 PF01343 Peptidase family S49 FY128_00070 PF00216 Bacterial DNA-binding protein FY128_00080 PF02926 THUMP domain FY128_00080 PF01170 Putative RNA methylase family UPF0020 FY128_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY128_00085 PF00588 SpoU rRNA Methylase family FY128_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY128_00090 PF01252 Signal peptidase (SPase) II FY128_00095 PF00672 HAMP domain FY128_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_00095 PF00512 His Kinase A (phospho-acceptor) domain FY128_00095 PF01627 Hpt domain FY128_00095 PF00072 Response regulator receiver domain FY128_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY128_00105 PF05188 MutS domain II FY128_00105 PF00488 MutS domain V FY128_00105 PF05190 MutS family domain IV FY128_00105 PF01624 MutS domain I FY128_00105 PF05192 MutS domain III FY128_00110 PF01842 ACT domain FY128_00110 PF08335 GlnD PII-uridylyltransferase FY128_00110 PF01966 HD domain FY128_00110 PF01909 Nucleotidyltransferase domain FY128_00115 PF03023 Lipid II flippase MurJ FY128_00125 PF00579 tRNA synthetases class I (W and Y) FY128_00135 PF01106 NifU-like domain FY128_00140 PF00814 Glycoprotease family FY128_00145 PF00814 Glycoprotease family FY128_00145 PF00583 Acetyltransferase (GNAT) family FY128_00150 PF01475 Ferric uptake regulator family FY128_00155 PF01553 Acyltransferase FY128_00160 PF04055 Radical SAM superfamily FY128_00160 PF01938 TRAM domain FY128_00160 PF00919 Uncharacterized protein family UPF0004 FY128_00165 PF02562 PhoH-like protein FY128_00170 PF02130 Uncharacterized protein family UPF0054 FY128_00175 PF00571 CBS domain FY128_00175 PF03471 Transporter associated domain FY128_00180 PF00795 Carbon-nitrogen hydrolase FY128_00185 PF01381 Helix-turn-helix FY128_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY128_00190 PF02772 S-adenosylmethionine synthetase, central domain FY128_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY128_00195 PF02390 Putative methyltransferase FY128_00200 PF00294 pfkB family carbohydrate kinase FY128_00205 PF02646 RmuC family FY128_00210 PF01327 Polypeptide deformylase FY128_00215 PF02911 Formyl transferase, C-terminal domain FY128_00215 PF00551 Formyl transferase FY128_00220 PF01416 tRNA pseudouridine synthase FY128_00230 PF07687 Peptidase dimerisation domain FY128_00230 PF01546 Peptidase family M20/M25/M40 FY128_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY128_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY128_00245 PF00672 HAMP domain FY128_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY128_00255 PF00011 Hsp20/alpha crystallin family FY128_00280 PF00696 Amino acid kinase family FY128_00290 PF01926 50S ribosome-binding GTPase FY128_00295 PF02096 60Kd inner membrane protein FY128_00295 PF14849 YidC periplasmic domain FY128_00300 PF00825 Ribonuclease P FY128_00305 PF00468 Ribosomal protein L34 FY128_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_00310 PF00672 HAMP domain FY128_00315 PF00512 His Kinase A (phospho-acceptor) domain FY128_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_00325 PF01209 ubiE/COQ5 methyltransferase family FY128_00330 PF00005 ABC transporter FY128_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY128_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY128_00350 PF00149 Calcineurin-like phosphoesterase FY128_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY128_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY128_00365 PF05544 Proline racemase FY128_00370 PF01979 Amidohydrolase family FY128_00375 PF00156 Phosphoribosyl transferase domain FY128_00380 PF00294 pfkB family carbohydrate kinase FY128_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY128_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY128_00400 PF00342 Phosphoglucose isomerase FY128_00405 PF13193 AMP-binding enzyme C-terminal domain FY128_00405 PF00501 AMP-binding enzyme FY128_00410 PF08402 TOBE domain FY128_00410 PF00005 ABC transporter FY128_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY128_00425 PF00593 TonB dependent receptor FY128_00425 PF07715 TonB-dependent Receptor Plug Domain FY128_00445 PF01679 Proteolipid membrane potential modulator FY128_00465 PF03976 Polyphosphate kinase 2 (PPK2) FY128_00470 PF00989 PAS fold FY128_00470 PF16736 Single Cache-like FY128_00470 PF00512 His Kinase A (phospho-acceptor) domain FY128_00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_00475 PF12849 PBP superfamily domain FY128_00480 PF00528 Binding-protein-dependent transport system inner membrane component FY128_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY128_00490 PF00005 ABC transporter FY128_00495 PF01895 PhoU domain FY128_00500 PF00072 Response regulator receiver domain FY128_00500 PF00486 Transcriptional regulatory protein, C terminal FY128_00510 PF00202 Aminotransferase class-III FY128_00515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY128_00515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY128_00520 PF01430 Hsp33 protein FY128_00525 PF04379 ApaG domain FY128_00530 PF01053 Cys/Met metabolism PLP-dependent enzyme FY128_00540 PF00692 dUTPase FY128_00550 PF00230 Major intrinsic protein FY128_00590 PF00072 Response regulator receiver domain FY128_00590 PF00196 Bacterial regulatory proteins, luxR family FY128_00600 PF01180 Dihydroorotate dehydrogenase FY128_00615 PF08241 Methyltransferase domain FY128_00635 PF02082 Transcriptional regulator FY128_00640 PF08494 DEAD/H associated FY128_00640 PF00271 Helicase conserved C-terminal domain FY128_00640 PF00270 DEAD/DEAH box helicase FY128_00660 PF01925 Sulfite exporter TauE/SafE FY128_00670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_00670 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY128_00670 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_00670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY128_00675 PF00108 Thiolase, N-terminal domain FY128_00675 PF02803 Thiolase, C-terminal domain FY128_00680 PF00378 Enoyl-CoA hydratase/isomerase FY128_00680 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY128_00680 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY128_00695 PF03334 Na+/H+ antiporter subunit FY128_00700 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY128_00705 PF01899 Na+/H+ ion antiporter subunit FY128_00710 PF00361 Proton-conducting membrane transporter FY128_00715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY128_00720 PF13244 Domain of unknown function (DUF4040) FY128_00720 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY128_00720 PF00361 Proton-conducting membrane transporter FY128_00720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY128_00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_00740 PF00072 Response regulator receiver domain FY128_00745 PF01627 Hpt domain FY128_00745 PF02895 Signal transducing histidine kinase, homodimeric domain FY128_00745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_00745 PF01584 CheW-like domain FY128_00750 PF01739 CheR methyltransferase, SAM binding domain FY128_00750 PF03705 CheR methyltransferase, all-alpha domain FY128_00755 PF01339 CheB methylesterase FY128_00755 PF00072 Response regulator receiver domain FY128_00760 PF00072 Response regulator receiver domain FY128_00765 PF03975 CheD chemotactic sensory transduction FY128_00775 PF01514 Secretory protein of YscJ/FliF family FY128_00775 PF08345 Flagellar M-ring protein C-terminal FY128_00780 PF00196 Bacterial regulatory proteins, luxR family FY128_00780 PF03472 Autoinducer binding domain FY128_00790 PF00672 HAMP domain FY128_00790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_00795 PF00672 HAMP domain FY128_00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_00795 PF00512 His Kinase A (phospho-acceptor) domain FY128_00795 PF01627 Hpt domain FY128_00795 PF00072 Response regulator receiver domain FY128_00800 PF01741 Large-conductance mechanosensitive channel, MscL FY128_00805 PF00155 Aminotransferase class I and II FY128_00810 PF01370 NAD dependent epimerase/dehydratase family FY128_00820 PF03884 DNA gyrase inhibitor YacG FY128_00825 PF02545 Maf-like protein FY128_00830 PF01176 Translation initiation factor 1A / IF-1 FY128_00840 PF06793 Uncharacterised protein family (UPF0262) FY128_00845 PF00815 Histidinol dehydrogenase FY128_00855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY128_00870 PF00700 Bacterial flagellin C-terminal helical region FY128_00870 PF00669 Bacterial flagellin N-terminal helical region FY128_00875 PF00700 Bacterial flagellin C-terminal helical region FY128_00875 PF00669 Bacterial flagellin N-terminal helical region FY128_00880 PF00669 Bacterial flagellin N-terminal helical region FY128_00880 PF00700 Bacterial flagellin C-terminal helical region FY128_00885 PF00813 FliP family FY128_00895 PF02107 Flagellar L-ring protein FY128_00905 PF02119 Flagellar P-ring protein FY128_00910 PF13144 Chaperone for flagella basal body P-ring formation FY128_00915 PF00460 Flagella basal body rod protein FY128_00915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY128_00920 PF02049 Flagellar hook-basal body complex protein FliE FY128_00925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY128_00930 PF00460 Flagella basal body rod protein FY128_00940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY128_00940 PF18269 T3SS EscN ATPase C-terminal domain FY128_00945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY128_00945 PF00460 Flagella basal body rod protein FY128_00955 PF01618 MotA/TolQ/ExbB proton channel family FY128_00960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY128_00965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY128_00970 PF14841 FliG middle domain FY128_00970 PF01706 FliG C-terminal domain FY128_00970 PF14842 FliG N-terminal domain FY128_00975 PF01312 FlhB HrpN YscU SpaS Family FY128_00985 PF00700 Bacterial flagellin C-terminal helical region FY128_00985 PF00669 Bacterial flagellin N-terminal helical region FY128_00995 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY128_00995 PF00691 OmpA family FY128_01005 PF02120 Flagellar hook-length control protein FliK FY128_01015 PF00486 Transcriptional regulatory protein, C terminal FY128_01020 PF07559 Flagellar basal body protein FlaE FY128_01020 PF00460 Flagella basal body rod protein FY128_01020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY128_01040 PF07378 Flagellar protein FlbT FY128_01045 PF03963 Flagellar hook capping protein - N-terminal region FY128_01050 PF01313 Bacterial export proteins, family 3 FY128_01055 PF00771 FHIPEP family FY128_01060 PF01311 Bacterial export proteins, family 1 FY128_01095 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY128_01095 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY128_01100 PF00356 Bacterial regulatory proteins, lacI family FY128_01105 PF01547 Bacterial extracellular solute-binding protein FY128_01110 PF00528 Binding-protein-dependent transport system inner membrane component FY128_01115 PF00528 Binding-protein-dependent transport system inner membrane component FY128_01120 PF00128 Alpha amylase, catalytic domain FY128_01125 PF00005 ABC transporter FY128_01125 PF17912 MalK OB fold domain FY128_01125 PF03459 TOBE domain FY128_01140 PF00920 Dehydratase family FY128_01145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY128_01150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY128_01150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY128_01160 PF01266 FAD dependent oxidoreductase FY128_01165 PF00120 Glutamine synthetase, catalytic domain FY128_01195 PF00463 Isocitrate lyase family FY128_01200 PF09856 Predicted transcriptional regulator (DUF2083) FY128_01200 PF06114 IrrE N-terminal-like domain FY128_01200 PF01381 Helix-turn-helix FY128_01205 PF13416 Bacterial extracellular solute-binding protein FY128_01210 PF08402 TOBE domain FY128_01210 PF00005 ABC transporter FY128_01215 PF00528 Binding-protein-dependent transport system inner membrane component FY128_01220 PF00528 Binding-protein-dependent transport system inner membrane component FY128_01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_01230 PF00989 PAS fold FY128_01230 PF13426 PAS domain FY128_01230 PF13188 PAS domain FY128_01230 PF00512 His Kinase A (phospho-acceptor) domain FY128_01240 PF02541 Ppx/GppA phosphatase family FY128_01245 PF01728 FtsJ-like methyltransferase FY128_01250 PF07690 Major Facilitator Superfamily FY128_01255 PF00753 Metallo-beta-lactamase superfamily FY128_01260 PF00478 IMP dehydrogenase / GMP reductase domain FY128_01260 PF00571 CBS domain FY128_01270 PF08240 Alcohol dehydrogenase GroES-like domain FY128_01270 PF00107 Zinc-binding dehydrogenase FY128_01275 PF01738 Dienelactone hydrolase family FY128_01280 PF00994 Probable molybdopterin binding domain FY128_01285 PF08544 GHMP kinases C terminal FY128_01285 PF00288 GHMP kinases N terminal domain FY128_01295 PF00348 Polyprenyl synthetase FY128_01310 PF01343 Peptidase family S49 FY128_01310 PF06965 Na+/H+ antiporter 1 FY128_01320 PF02091 Glycyl-tRNA synthetase alpha subunit FY128_01325 PF04011 LemA family FY128_01330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY128_01340 PF05746 DALR anticodon binding domain FY128_01340 PF02092 Glycyl-tRNA synthetase beta subunit FY128_01355 PF04463 Protein of unknown function (DUF523) FY128_01360 PF00672 HAMP domain FY128_01360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_01370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY128_01370 PF02843 Phosphoribosylglycinamide synthetase, C domain FY128_01370 PF02844 Phosphoribosylglycinamide synthetase, N domain FY128_01375 PF17674 HHH domain FY128_01375 PF00575 S1 RNA binding domain FY128_01375 PF09371 Tex-like protein N-terminal domain FY128_01375 PF16921 Tex protein YqgF-like domain FY128_01390 PF01040 UbiA prenyltransferase family FY128_01405 PF03466 LysR substrate binding domain FY128_01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_01415 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY128_01420 PF04452 RNA methyltransferase FY128_01425 PF01384 Phosphate transporter family FY128_01435 PF05116 Sucrose-6F-phosphate phosphohydrolase FY128_01440 PF13439 Glycosyltransferase Family 4 FY128_01440 PF00534 Glycosyl transferases group 1 FY128_01445 PF07729 FCD domain FY128_01445 PF00392 Bacterial regulatory proteins, gntR family FY128_01455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_01455 PF03466 LysR substrate binding domain FY128_01460 PF02913 FAD linked oxidases, C-terminal domain FY128_01460 PF01565 FAD binding domain FY128_01465 PF01565 FAD binding domain FY128_01470 PF02754 Cysteine-rich domain FY128_01470 PF13183 4Fe-4S dicluster domain FY128_01480 PF17969 L,D-transpeptidase C-terminal domain FY128_01480 PF03734 L,D-transpeptidase catalytic domain FY128_01485 PF03352 Methyladenine glycosylase FY128_01495 PF03601 Conserved hypothetical protein 698 FY128_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_01500 PF03466 LysR substrate binding domain FY128_01520 PF13393 Histidyl-tRNA synthetase FY128_01520 PF03129 Anticodon binding domain FY128_01530 PF13393 Histidyl-tRNA synthetase FY128_01535 PF01634 ATP phosphoribosyltransferase FY128_01540 PF07681 DoxX FY128_01550 PF00118 TCP-1/cpn60 chaperonin family FY128_01555 PF00166 Chaperonin 10 Kd subunit FY128_01565 PF06574 FAD synthetase FY128_01565 PF01687 Riboflavin kinase FY128_01570 PF00133 tRNA synthetases class I (I, L, M and V) FY128_01570 PF08264 Anticodon-binding domain of tRNA FY128_01580 PF14437 MafB19-like deaminase FY128_01585 PF01479 S4 domain FY128_01585 PF00849 RNA pseudouridylate synthase FY128_01595 PF01734 Patatin-like phospholipase FY128_01600 PF00999 Sodium/hydrogen exchanger family FY128_01600 PF02254 TrkA-N domain FY128_01605 PF01523 Putative modulator of DNA gyrase FY128_01620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY128_01620 PF00534 Glycosyl transferases group 1 FY128_01630 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY128_01640 PF08676 MutL C terminal dimerisation domain FY128_01640 PF01119 DNA mismatch repair protein, C-terminal domain FY128_01645 PF00072 Response regulator receiver domain FY128_01645 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_01645 PF01627 Hpt domain FY128_01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_01645 PF00989 PAS fold FY128_01645 PF00512 His Kinase A (phospho-acceptor) domain FY128_01650 PF00563 EAL domain FY128_01650 PF00990 Diguanylate cyclase, GGDEF domain FY128_01650 PF03707 Bacterial signalling protein N terminal repeat FY128_01650 PF13188 PAS domain FY128_01655 PF08450 SMP-30/Gluconolactonase/LRE-like region FY128_01660 PF01081 KDPG and KHG aldolase FY128_01665 PF05035 2-keto-3-deoxy-galactonokinase FY128_01680 PF03472 Autoinducer binding domain FY128_01680 PF00196 Bacterial regulatory proteins, luxR family FY128_01690 PF10609 NUBPL iron-transfer P-loop NTPase FY128_01695 PF01544 CorA-like Mg2+ transporter protein FY128_01700 PF02705 K+ potassium transporter FY128_01710 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FY128_01715 PF00119 ATP synthase A chain FY128_01720 PF00137 ATP synthase subunit C FY128_01725 PF00430 ATP synthase B/B' CF(0) FY128_01730 PF00430 ATP synthase B/B' CF(0) FY128_01740 PF01351 Ribonuclease HII FY128_01755 PF01565 FAD binding domain FY128_01755 PF02913 FAD linked oxidases, C-terminal domain FY128_01760 PF03481 Putative GTP-binding controlling metal-binding FY128_01760 PF01300 Telomere recombination FY128_01770 PF00355 Rieske [2Fe-2S] domain FY128_01770 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY128_01775 PF00175 Oxidoreductase NAD-binding domain FY128_01775 PF00111 2Fe-2S iron-sulfur cluster binding domain FY128_01775 PF00970 Oxidoreductase FAD-binding domain FY128_01780 PF07886 BA14K-like protein FY128_01785 PF07886 BA14K-like protein FY128_01795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_01795 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY128_01795 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_01795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY128_01810 PF05958 tRNA (Uracil-5-)-methyltransferase FY128_01815 PF01728 FtsJ-like methyltransferase FY128_01815 PF01479 S4 domain FY128_01820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_01820 PF00672 HAMP domain FY128_01845 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY128_01845 PF02780 Transketolase, C-terminal domain FY128_01845 PF02779 Transketolase, pyrimidine binding domain FY128_01850 PF05726 Pirin C-terminal cupin domain FY128_01850 PF02678 Pirin FY128_01855 PF02609 Exonuclease VII small subunit FY128_01860 PF00850 Histone deacetylase domain FY128_01865 PF02632 BioY family FY128_01870 PF02361 Cobalt transport protein FY128_01875 PF00005 ABC transporter FY128_01880 PF06224 Winged helix DNA-binding domain FY128_01885 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY128_01885 PF00925 GTP cyclohydrolase II FY128_01890 PF01264 Chorismate synthase FY128_01905 PF00300 Histidine phosphatase superfamily (branch 1) FY128_01915 PF00226 DnaJ domain FY128_01915 PF01556 DnaJ C terminal domain FY128_01915 PF00684 DnaJ central domain FY128_01925 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY128_01925 PF01243 Pyridoxamine 5'-phosphate oxidase FY128_01930 PF13419 Haloacid dehalogenase-like hydrolase FY128_01940 PF01523 Putative modulator of DNA gyrase FY128_01950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY128_01950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY128_01955 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY128_01960 PF01040 UbiA prenyltransferase family FY128_01965 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY128_01970 PF00510 Cytochrome c oxidase subunit III FY128_01980 PF02104 SURF1 family FY128_01985 PF02401 LytB protein FY128_01990 PF01636 Phosphotransferase enzyme family FY128_01995 PF00075 RNase H FY128_02005 PF00462 Glutaredoxin FY128_02005 PF08534 Redoxin FY128_02015 PF02622 Uncharacterized ACR, COG1678 FY128_02025 PF15887 Putative zinc-binding metallo-peptidase FY128_02025 PF10005 zinc-ribbon domain FY128_02030 PF00563 EAL domain FY128_02030 PF13185 GAF domain FY128_02030 PF00990 Diguanylate cyclase, GGDEF domain FY128_02035 PF13302 Acetyltransferase (GNAT) domain FY128_02040 PF00675 Insulinase (Peptidase family M16) FY128_02040 PF05193 Peptidase M16 inactive domain FY128_02045 PF00291 Pyridoxal-phosphate dependent enzyme FY128_02045 PF14821 Threonine synthase N terminus FY128_02055 PF13419 Haloacid dehalogenase-like hydrolase FY128_02075 PF01555 DNA methylase FY128_02075 PF18755 Restriction Enzyme Adenine Methylase Associated FY128_02085 PF00633 Helix-hairpin-helix motif FY128_02085 PF00730 HhH-GPD superfamily base excision DNA repair protein FY128_02085 PF14815 NUDIX domain FY128_02095 PF13462 Thioredoxin FY128_02100 PF02463 RecF/RecN/SMC N terminal domain FY128_02105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_02110 PF00391 PEP-utilising enzyme, mobile domain FY128_02110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY128_02110 PF02896 PEP-utilising enzyme, TIM barrel domain FY128_02125 PF00375 Sodium:dicarboxylate symporter family FY128_02150 PF13180 PDZ domain FY128_02155 PF06039 Malate:quinone oxidoreductase (Mqo) FY128_02185 PF00009 Elongation factor Tu GTP binding domain FY128_02190 PF01507 Phosphoadenosine phosphosulfate reductase family FY128_02195 PF01507 Phosphoadenosine phosphosulfate reductase family FY128_02200 PF02082 Transcriptional regulator FY128_02210 PF00528 Binding-protein-dependent transport system inner membrane component FY128_02215 PF00528 Binding-protein-dependent transport system inner membrane component FY128_02220 PF12857 TOBE-like domain FY128_02220 PF00005 ABC transporter FY128_02225 PF00550 Phosphopantetheine attachment site FY128_02225 PF00698 Acyl transferase domain FY128_02225 PF08240 Alcohol dehydrogenase GroES-like domain FY128_02225 PF00107 Zinc-binding dehydrogenase FY128_02225 PF16197 Ketoacyl-synthetase C-terminal extension FY128_02225 PF00109 Beta-ketoacyl synthase, N-terminal domain FY128_02225 PF02801 Beta-ketoacyl synthase, C-terminal domain FY128_02225 PF08659 KR domain FY128_02225 PF14765 Polyketide synthase dehydratase FY128_02230 PF00989 PAS fold FY128_02230 PF00990 Diguanylate cyclase, GGDEF domain FY128_02230 PF01590 GAF domain FY128_02230 PF00563 EAL domain FY128_02240 PF13977 BetI-type transcriptional repressor, C-terminal FY128_02240 PF00440 Bacterial regulatory proteins, tetR family FY128_02245 PF00171 Aldehyde dehydrogenase family FY128_02250 PF05199 GMC oxidoreductase FY128_02250 PF00732 GMC oxidoreductase FY128_02265 PF00654 Voltage gated chloride channel FY128_02295 PF07690 Major Facilitator Superfamily FY128_02305 PF04675 DNA ligase N terminus FY128_02305 PF01068 ATP dependent DNA ligase domain FY128_02305 PF04679 ATP dependent DNA ligase C terminal region FY128_02315 PF00403 Heavy-metal-associated domain FY128_02320 PF03734 L,D-transpeptidase catalytic domain FY128_02320 PF17969 L,D-transpeptidase C-terminal domain FY128_02325 PF03734 L,D-transpeptidase catalytic domain FY128_02325 PF17969 L,D-transpeptidase C-terminal domain FY128_02340 PF01047 MarR family FY128_02345 PF02566 OsmC-like protein FY128_02360 PF00005 ABC transporter FY128_02360 PF16326 ABC transporter C-terminal domain FY128_02360 PF12848 ABC transporter FY128_02395 PF03466 LysR substrate binding domain FY128_02395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_02400 PF00106 short chain dehydrogenase FY128_02410 PF05872 Bacterial protein of unknown function (DUF853) FY128_02420 PF01638 HxlR-like helix-turn-helix FY128_02425 PF00106 short chain dehydrogenase FY128_02430 PF12833 Helix-turn-helix domain FY128_02435 PF01810 LysE type translocator FY128_02440 PF00248 Aldo/keto reductase family FY128_02445 PF08279 HTH domain FY128_02445 PF13280 WYL domain FY128_02460 PF01063 Amino-transferase class IV FY128_02465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_02465 PF00672 HAMP domain FY128_02470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_02470 PF03466 LysR substrate binding domain FY128_02485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY128_02485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY128_02500 PF01810 LysE type translocator FY128_02505 PF01322 Cytochrome C' FY128_02510 PF00034 Cytochrome c FY128_02540 PF00376 MerR family regulatory protein FY128_02540 PF09278 MerR, DNA binding FY128_02550 PF02583 Metal-sensitive transcriptional repressor FY128_02555 PF01545 Cation efflux family FY128_02565 PF00005 ABC transporter FY128_02565 PF00571 CBS domain FY128_02570 PF00528 Binding-protein-dependent transport system inner membrane component FY128_02580 PF00326 Prolyl oligopeptidase family FY128_02580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY128_02590 PF00701 Dihydrodipicolinate synthetase family FY128_02600 PF02805 Metal binding domain of Ada FY128_02600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY128_02600 PF12833 Helix-turn-helix domain FY128_02600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY128_02605 PF01594 AI-2E family transporter FY128_02610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_02625 PF03006 Haemolysin-III related FY128_02635 PF01810 LysE type translocator FY128_02640 PF01641 SelR domain FY128_02645 PF00361 Proton-conducting membrane transporter FY128_02645 PF13244 Domain of unknown function (DUF4040) FY128_02645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY128_02650 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY128_02655 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY128_02660 PF00361 Proton-conducting membrane transporter FY128_02665 PF01899 Na+/H+ ion antiporter subunit FY128_02670 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY128_02675 PF03334 Na+/H+ antiporter subunit FY128_02680 PF05443 ROS/MUCR transcriptional regulator protein FY128_02695 PF02657 Fe-S metabolism associated domain FY128_02700 PF17264 Family of unknown function (DUF5330) FY128_02705 PF00512 His Kinase A (phospho-acceptor) domain FY128_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_02740 PF01546 Peptidase family M20/M25/M40 FY128_02740 PF07687 Peptidase dimerisation domain FY128_02745 PF01810 LysE type translocator FY128_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_02750 PF03466 LysR substrate binding domain FY128_02755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_02760 PF00905 Penicillin binding protein transpeptidase domain FY128_02760 PF00912 Transglycosylase FY128_02765 PF03692 Putative zinc- or iron-chelating domain FY128_02770 PF00905 Penicillin binding protein transpeptidase domain FY128_02780 PF00376 MerR family regulatory protein FY128_02780 PF09278 MerR, DNA binding FY128_02795 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY128_02795 PF08244 Glycosyl hydrolases family 32 C terminal FY128_02800 PF13426 PAS domain FY128_02800 PF07536 HWE histidine kinase FY128_02800 PF08447 PAS fold FY128_02805 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY128_02815 PF01037 Lrp/AsnC ligand binding domain FY128_02815 PF13404 AsnC-type helix-turn-helix domain FY128_02855 PF04860 Phage portal protein FY128_02945 PF00486 Transcriptional regulatory protein, C terminal FY128_02945 PF00072 Response regulator receiver domain FY128_02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_02965 PF03100 CcmE FY128_02970 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY128_02970 PF01578 Cytochrome C assembly protein FY128_02975 PF03918 Cytochrome C biogenesis protein FY128_02980 PF13180 PDZ domain FY128_02985 PF00072 Response regulator receiver domain FY128_02985 PF00486 Transcriptional regulatory protein, C terminal FY128_02990 PF13426 PAS domain FY128_02990 PF00072 Response regulator receiver domain FY128_02990 PF00512 His Kinase A (phospho-acceptor) domain FY128_02990 PF08448 PAS fold FY128_02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_02995 PF04134 Protein of unknown function, DUF393 FY128_03005 PF08335 GlnD PII-uridylyltransferase FY128_03005 PF03710 Glutamate-ammonia ligase adenylyltransferase FY128_03010 PF00512 His Kinase A (phospho-acceptor) domain FY128_03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_03010 PF00989 PAS fold FY128_03020 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY128_03020 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY128_03020 PF01433 Peptidase family M1 domain FY128_03040 PF00012 Hsp70 protein FY128_03045 PF00990 Diguanylate cyclase, GGDEF domain FY128_03075 PF08240 Alcohol dehydrogenase GroES-like domain FY128_03075 PF00107 Zinc-binding dehydrogenase FY128_03080 PF01638 HxlR-like helix-turn-helix FY128_03085 PF02673 Bacitracin resistance protein BacA FY128_03090 PF00571 CBS domain FY128_03090 PF01769 Divalent cation transporter FY128_03090 PF03448 MgtE intracellular N domain FY128_03095 PF07690 Major Facilitator Superfamily FY128_03100 PF00781 Diacylglycerol kinase catalytic domain FY128_03105 PF00202 Aminotransferase class-III FY128_03115 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY128_03115 PF01048 Phosphorylase superfamily FY128_03140 PF00155 Aminotransferase class I and II FY128_03150 PF14759 Reductase C-terminal FY128_03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_03155 PF03328 HpcH/HpaI aldolase/citrate lyase family FY128_03170 PF02530 Porin subfamily FY128_03180 PF02530 Porin subfamily FY128_03185 PF14718 Soluble lytic murein transglycosylase L domain FY128_03185 PF01464 Transglycosylase SLT domain FY128_03190 PF00701 Dihydrodipicolinate synthetase family FY128_03195 PF01668 SmpB protein FY128_03200 PF00672 HAMP domain FY128_03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_03210 PF01192 RNA polymerase Rpb6 FY128_03215 PF13291 ACT domain FY128_03215 PF04607 Region found in RelA / SpoT proteins FY128_03215 PF02824 TGS domain FY128_03230 PF01648 4'-phosphopantetheinyl transferase superfamily FY128_03235 PF10502 Signal peptidase, peptidase S26 FY128_03240 PF00035 Double-stranded RNA binding motif FY128_03240 PF14622 Ribonuclease-III-like FY128_03245 PF07650 KH domain FY128_03245 PF01926 50S ribosome-binding GTPase FY128_03250 PF00027 Cyclic nucleotide-binding domain FY128_03250 PF13545 Crp-like helix-turn-helix domain FY128_03255 PF00072 Response regulator receiver domain FY128_03260 PF11967 Recombination protein O N terminal FY128_03260 PF02565 Recombination protein O C terminal FY128_03265 PF07690 Major Facilitator Superfamily FY128_03270 PF08241 Methyltransferase domain FY128_03280 PF01966 HD domain FY128_03290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_03300 PF00005 ABC transporter FY128_03305 PF00528 Binding-protein-dependent transport system inner membrane component FY128_03310 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY128_03315 PF00924 Mechanosensitive ion channel FY128_03315 PF05552 Conserved TM helix FY128_03325 PF01966 HD domain FY128_03330 PF01571 Aminomethyltransferase folate-binding domain FY128_03350 PF00293 NUDIX domain FY128_03350 PF03099 Biotin/lipoate A/B protein ligase family FY128_03355 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY128_03365 PF00072 Response regulator receiver domain FY128_03365 PF00990 Diguanylate cyclase, GGDEF domain FY128_03370 PF01066 CDP-alcohol phosphatidyltransferase FY128_03375 PF02666 Phosphatidylserine decarboxylase FY128_03380 PF00005 ABC transporter FY128_03380 PF00664 ABC transporter transmembrane region FY128_03390 PF03641 Possible lysine decarboxylase FY128_03395 PF03717 Penicillin-binding Protein dimerisation domain FY128_03395 PF00905 Penicillin binding protein transpeptidase domain FY128_03400 PF00892 EamA-like transporter family FY128_03405 PF00561 alpha/beta hydrolase fold FY128_03425 PF04480 Protein of unknown function (DUF559) FY128_03430 PF09190 DALR domain FY128_03430 PF01406 tRNA synthetases class I (C) catalytic domain FY128_03435 PF00106 short chain dehydrogenase FY128_03440 PF00156 Phosphoribosyl transferase domain FY128_03440 PF13537 Glutamine amidotransferase domain FY128_03445 PF02674 Colicin V production protein FY128_03450 PF06745 KaiC FY128_03450 PF18073 Rubredoxin metal binding domain FY128_03460 PF00842 Alanine racemase, C-terminal domain FY128_03460 PF01168 Alanine racemase, N-terminal domain FY128_03465 PF12833 Helix-turn-helix domain FY128_03465 PF12852 Cupin FY128_03470 PF03591 AzlC protein FY128_03480 PF03796 DnaB-like helicase C terminal domain FY128_03480 PF00772 DnaB-like helicase N terminal domain FY128_03485 PF01047 MarR family FY128_03495 PF13533 Biotin-lipoyl like FY128_03500 PF01281 Ribosomal protein L9, N-terminal domain FY128_03500 PF03948 Ribosomal protein L9, C-terminal domain FY128_03510 PF01084 Ribosomal protein S18 FY128_03515 PF01250 Ribosomal protein S6 FY128_03520 PF00248 Aldo/keto reductase family FY128_03525 PF00698 Acyl transferase domain FY128_03535 PF00550 Phosphopantetheine attachment site FY128_03540 PF00109 Beta-ketoacyl synthase, N-terminal domain FY128_03540 PF02801 Beta-ketoacyl synthase, C-terminal domain FY128_03545 PF02618 YceG-like family FY128_03550 PF08340 Domain of unknown function (DUF1732) FY128_03550 PF03755 YicC-like family, N-terminal region FY128_03555 PF00625 Guanylate kinase FY128_03565 PF00398 Ribosomal RNA adenine dimethylase FY128_03570 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY128_03580 PF03968 OstA-like protein FY128_03580 PF04453 LPS transport system D FY128_03595 PF00883 Cytosol aminopeptidase family, catalytic domain FY128_03595 PF02789 Cytosol aminopeptidase family, N-terminal domain FY128_03605 PF00563 EAL domain FY128_03605 PF00990 Diguanylate cyclase, GGDEF domain FY128_03605 PF03707 Bacterial signalling protein N terminal repeat FY128_03610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_03615 PF00990 Diguanylate cyclase, GGDEF domain FY128_03615 PF13185 GAF domain FY128_03615 PF00563 EAL domain FY128_03620 PF12848 ABC transporter FY128_03620 PF00005 ABC transporter FY128_03625 PF00990 Diguanylate cyclase, GGDEF domain FY128_03625 PF17158 Membrane-associated sensor, integral membrane domain FY128_03630 PF13417 Glutathione S-transferase, N-terminal domain FY128_03635 PF00334 Nucleoside diphosphate kinase FY128_03655 PF02391 MoaE protein FY128_03665 PF01066 CDP-alcohol phosphatidyltransferase FY128_03670 PF02151 UvrB/uvrC motif FY128_03670 PF01541 GIY-YIG catalytic domain FY128_03670 PF08459 UvrC Helix-hairpin-helix N-terminal FY128_03680 PF13505 Outer membrane protein beta-barrel domain FY128_03685 PF13417 Glutathione S-transferase, N-terminal domain FY128_03685 PF00043 Glutathione S-transferase, C-terminal domain FY128_03690 PF00445 Ribonuclease T2 family FY128_03700 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY128_03705 PF01568 Molydopterin dinucleotide binding domain FY128_03705 PF00384 Molybdopterin oxidoreductase FY128_03705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY128_03710 PF00293 NUDIX domain FY128_03720 PF00551 Formyl transferase FY128_03725 PF02769 AIR synthase related protein, C-terminal domain FY128_03725 PF00586 AIR synthase related protein, N-terminal domain FY128_03730 PF01594 AI-2E family transporter FY128_03740 PF02503 Polyphosphate kinase middle domain FY128_03740 PF13090 Polyphosphate kinase C-terminal domain 2 FY128_03740 PF17941 Polyphosphate kinase C-terminal domain 1 FY128_03740 PF13089 Polyphosphate kinase N-terminal domain FY128_03745 PF02541 Ppx/GppA phosphatase family FY128_03750 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_03770 PF00211 Adenylate and Guanylate cyclase catalytic domain FY128_03780 PF01612 3'-5' exonuclease FY128_03780 PF00570 HRDC domain FY128_03785 PF07690 Major Facilitator Superfamily FY128_03790 PF00152 tRNA synthetases class II (D, K and N) FY128_03790 PF02938 GAD domain FY128_03790 PF01336 OB-fold nucleic acid binding domain FY128_03795 PF06123 Inner membrane protein CreD FY128_03800 PF01740 STAS domain FY128_03800 PF00916 Sulfate permease family FY128_03810 PF03989 DNA gyrase C-terminal domain, beta-propeller FY128_03810 PF00521 DNA gyrase/topoisomerase IV, subunit A FY128_03815 PF02661 Fic/DOC family FY128_03820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY128_03825 PF04377 Arginine-tRNA-protein transferase, C terminus FY128_03825 PF04376 Arginine-tRNA-protein transferase, N terminus FY128_03835 PF00490 Delta-aminolevulinic acid dehydratase FY128_03855 PF00464 Serine hydroxymethyltransferase FY128_03860 PF03477 ATP cone domain FY128_03865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY128_03865 PF01872 RibD C-terminal domain FY128_03870 PF00677 Lumazine binding domain FY128_03875 PF01810 LysE type translocator FY128_03880 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY128_03885 PF01029 NusB family FY128_03890 PF07690 Major Facilitator Superfamily FY128_03895 PF03030 Inorganic H+ pyrophosphatase FY128_03915 PF02504 Fatty acid synthesis protein FY128_03920 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY128_03920 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY128_03925 PF00216 Bacterial DNA-binding protein FY128_03930 PF13411 MerR HTH family regulatory protein FY128_03945 PF00403 Heavy-metal-associated domain FY128_03950 PF00970 Oxidoreductase FAD-binding domain FY128_03950 PF00111 2Fe-2S iron-sulfur cluster binding domain FY128_03950 PF00175 Oxidoreductase NAD-binding domain FY128_03955 PF09278 MerR, DNA binding FY128_03955 PF00376 MerR family regulatory protein FY128_03960 PF00528 Binding-protein-dependent transport system inner membrane component FY128_03965 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_03965 PF00528 Binding-protein-dependent transport system inner membrane component FY128_03970 PF00005 ABC transporter FY128_03970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_03975 PF00005 ABC transporter FY128_03975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_03980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_03990 PF02386 Cation transport protein FY128_03995 PF00291 Pyridoxal-phosphate dependent enzyme FY128_03995 PF00585 C-terminal regulatory domain of Threonine dehydratase FY128_04005 PF00072 Response regulator receiver domain FY128_04005 PF00990 Diguanylate cyclase, GGDEF domain FY128_04010 PF02525 Flavodoxin-like fold FY128_04015 PF03466 LysR substrate binding domain FY128_04015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_04025 PF00149 Calcineurin-like phosphoesterase FY128_04025 PF02872 5'-nucleotidase, C-terminal domain FY128_04050 PF00581 Rhodanese-like domain FY128_04055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY128_04055 PF01411 tRNA synthetases class II (A) FY128_04055 PF02272 DHHA1 domain FY128_04060 PF00571 CBS domain FY128_04060 PF00291 Pyridoxal-phosphate dependent enzyme FY128_04065 PF00875 DNA photolyase FY128_04065 PF03441 FAD binding domain of DNA photolyase FY128_04075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY128_04075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY128_04105 PF06055 Exopolysaccharide synthesis, ExoD FY128_04110 PF09335 SNARE associated Golgi protein FY128_04125 PF01032 FecCD transport family FY128_04130 PF00005 ABC transporter FY128_04135 PF00127 Copper binding proteins, plastocyanin/azurin family FY128_04140 PF00210 Ferritin-like domain FY128_04175 PF02397 Bacterial sugar transferase FY128_04180 PF00534 Glycosyl transferases group 1 FY128_04205 PF02628 Cytochrome oxidase assembly protein FY128_04210 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY128_04215 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY128_04220 PF00491 Arginase family FY128_04225 PF00380 Ribosomal protein S9/S16 FY128_04230 PF00572 Ribosomal protein L13 FY128_04245 PF13380 CoA binding domain FY128_04250 PF01053 Cys/Met metabolism PLP-dependent enzyme FY128_04260 PF00067 Cytochrome P450 FY128_04265 PF00990 Diguanylate cyclase, GGDEF domain FY128_04270 PF00574 Clp protease FY128_04275 PF07724 AAA domain (Cdc48 subfamily) FY128_04275 PF10431 C-terminal, D2-small domain, of ClpB protein FY128_04275 PF06689 ClpX C4-type zinc finger FY128_04280 PF00004 ATPase family associated with various cellular activities (AAA) FY128_04280 PF05362 Lon protease (S16) C-terminal proteolytic domain FY128_04280 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY128_04285 PF00216 Bacterial DNA-binding protein FY128_04290 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY128_04315 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY128_04320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY128_04325 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY128_04335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY128_04350 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY128_04350 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY128_04350 PF10531 SLBB domain FY128_04355 PF00384 Molybdopterin oxidoreductase FY128_04355 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY128_04355 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY128_04360 PF00146 NADH dehydrogenase FY128_04365 PF12838 4Fe-4S dicluster domain FY128_04370 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY128_04375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY128_04380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY128_04380 PF00361 Proton-conducting membrane transporter FY128_04385 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY128_04385 PF00361 Proton-conducting membrane transporter FY128_04390 PF00361 Proton-conducting membrane transporter FY128_04395 PF02237 Biotin protein ligase C terminal domain FY128_04395 PF03099 Biotin/lipoate A/B protein ligase family FY128_04395 PF08279 HTH domain FY128_04400 PF17770 Ribonuclease J C-terminal domain FY128_04400 PF12706 Beta-lactamase superfamily domain FY128_04400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY128_04410 PF03129 Anticodon binding domain FY128_04410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY128_04415 PF02687 FtsX-like permease family FY128_04415 PF12704 MacB-like periplasmic core domain FY128_04420 PF00005 ABC transporter FY128_04425 PF14579 Helix-hairpin-helix motif FY128_04425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY128_04425 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY128_04425 PF02811 PHP domain FY128_04435 PF11799 impB/mucB/samB family C-terminal domain FY128_04435 PF00817 impB/mucB/samB family FY128_04445 PF00072 Response regulator receiver domain FY128_04450 PF00990 Diguanylate cyclase, GGDEF domain FY128_04450 PF00072 Response regulator receiver domain FY128_04455 PF00471 Ribosomal protein L33 FY128_04460 PF07690 Major Facilitator Superfamily FY128_04475 PF17876 Cold shock domain FY128_04475 PF08461 Ribonuclease R winged-helix domain FY128_04475 PF08206 Ribonuclease B OB domain FY128_04475 PF00773 RNB domain FY128_04475 PF00575 S1 RNA binding domain FY128_04480 PF01131 DNA topoisomerase FY128_04480 PF01751 Toprim domain FY128_04480 PF01396 Topoisomerase DNA binding C4 zinc finger FY128_04480 PF13368 Topoisomerase C-terminal repeat FY128_04490 PF17782 DprA winged helix domain FY128_04490 PF02481 DNA recombination-mediator protein A FY128_04495 PF02660 Glycerol-3-phosphate acyltransferase FY128_04500 PF01979 Amidohydrolase family FY128_04505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY128_04505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY128_04510 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_04510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_04510 PF18158 Adaptive response protein AidB N-terminal domain FY128_04515 PF00583 Acetyltransferase (GNAT) family FY128_04535 PF03652 Holliday junction resolvase FY128_04540 PF03831 PhnA domain FY128_04540 PF08274 PhnA Zinc-Ribbon FY128_04550 PF02686 Glu-tRNAGln amidotransferase C subunit FY128_04555 PF01425 Amidase FY128_04560 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY128_04565 PF00583 Acetyltransferase (GNAT) family FY128_04575 PF02934 GatB/GatE catalytic domain FY128_04575 PF02637 GatB domain FY128_04585 PF00583 Acetyltransferase (GNAT) family FY128_04600 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY128_04605 PF02785 Biotin carboxylase C-terminal domain FY128_04605 PF00289 Biotin carboxylase, N-terminal domain FY128_04605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_04610 PF00364 Biotin-requiring enzyme FY128_04615 PF01220 Dehydroquinase class II FY128_04620 PF13462 Thioredoxin FY128_04620 PF06965 Na+/H+ antiporter 1 FY128_04625 PF00155 Aminotransferase class I and II FY128_04650 PF12111 Polyribonucleotide phosphorylase C terminal FY128_04650 PF10150 Ribonuclease E/G family FY128_04650 PF00575 S1 RNA binding domain FY128_04655 PF01520 N-acetylmuramoyl-L-alanine amidase FY128_04660 PF17092 Penicillin-binding protein OB-like domain FY128_04660 PF00912 Transglycosylase FY128_04660 PF00905 Penicillin binding protein transpeptidase domain FY128_04680 PF01513 ATP-NAD kinase FY128_04685 PF02567 Phenazine biosynthesis-like protein FY128_04700 PF00111 2Fe-2S iron-sulfur cluster binding domain FY128_04710 PF00809 Pterin binding enzyme FY128_04715 PF02152 Dihydroneopterin aldolase FY128_04720 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY128_04730 PF05128 Domain of unknown function (DUF697) FY128_04735 PF04317 YcjX-like family, DUF463 FY128_04745 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY128_04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_04760 PF00512 His Kinase A (phospho-acceptor) domain FY128_04760 PF08448 PAS fold FY128_04760 PF13188 PAS domain FY128_04760 PF00072 Response regulator receiver domain FY128_04765 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY128_04770 PF00004 ATPase family associated with various cellular activities (AAA) FY128_04770 PF07724 AAA domain (Cdc48 subfamily) FY128_04770 PF17871 AAA lid domain FY128_04770 PF10431 C-terminal, D2-small domain, of ClpB protein FY128_04770 PF02861 Clp amino terminal domain, pathogenicity island component FY128_04795 PF03466 LysR substrate binding domain FY128_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_04805 PF01230 HIT domain FY128_04830 PF00318 Ribosomal protein S2 FY128_04835 PF00889 Elongation factor TS FY128_04840 PF00696 Amino acid kinase family FY128_04845 PF01765 Ribosome recycling factor FY128_04850 PF01255 Putative undecaprenyl diphosphate synthase FY128_04860 PF02163 Peptidase family M50 FY128_04860 PF17820 PDZ domain FY128_04865 PF01103 Surface antigen FY128_04865 PF07244 Surface antigen variable number repeat FY128_04870 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY128_04870 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_04875 PF07977 FabA-like domain FY128_04880 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY128_04880 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_04885 PF17930 LpxI N-terminal domain FY128_04885 PF06230 LpxI C-terminal domain FY128_04890 PF02684 Lipid-A-disaccharide synthetase FY128_04895 PF00285 Citrate synthase, C-terminal domain FY128_04910 PF00717 Peptidase S24-like FY128_04910 PF01726 LexA DNA binding domain FY128_04920 PF00793 DAHP synthetase I family FY128_04925 PF03952 Enolase, N-terminal domain FY128_04925 PF00113 Enolase, C-terminal TIM barrel domain FY128_04935 PF00676 Dehydrogenase E1 component FY128_04940 PF02779 Transketolase, pyrimidine binding domain FY128_04940 PF02780 Transketolase, C-terminal domain FY128_04940 PF00364 Biotin-requiring enzyme FY128_04945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY128_04945 PF00364 Biotin-requiring enzyme FY128_04945 PF02817 e3 binding domain FY128_04955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY128_04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_04965 PF04055 Radical SAM superfamily FY128_04965 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY128_04970 PF00892 EamA-like transporter family FY128_04985 PF03364 Polyketide cyclase / dehydrase and lipid transport FY128_04990 PF02464 Competence-damaged protein FY128_04995 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY128_04995 PF02542 YgbB family FY128_05000 PF01207 Dihydrouridine synthase (Dus) FY128_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_05005 PF00512 His Kinase A (phospho-acceptor) domain FY128_05005 PF00989 PAS fold FY128_05010 PF02954 Bacterial regulatory protein, Fis family FY128_05010 PF00072 Response regulator receiver domain FY128_05010 PF00158 Sigma-54 interaction domain FY128_05015 PF00672 HAMP domain FY128_05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_05015 PF00512 His Kinase A (phospho-acceptor) domain FY128_05015 PF00989 PAS fold FY128_05020 PF02954 Bacterial regulatory protein, Fis family FY128_05020 PF00158 Sigma-54 interaction domain FY128_05020 PF00072 Response regulator receiver domain FY128_05025 PF02080 TrkA-C domain FY128_05025 PF02254 TrkA-N domain FY128_05030 PF17209 Hfq protein FY128_05035 PF16360 GTP-binding GTPase Middle Region FY128_05035 PF13167 GTP-binding GTPase N-terminal FY128_05035 PF01926 50S ribosome-binding GTPase FY128_05040 PF03819 MazG nucleotide pyrophosphohydrolase domain FY128_05050 PF10414 Sirohaem synthase dimerisation region FY128_05050 PF14824 Sirohaem biosynthesis protein central FY128_05050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_05070 PF00175 Oxidoreductase NAD-binding domain FY128_05070 PF00970 Oxidoreductase FAD-binding domain FY128_05075 PF07690 Major Facilitator Superfamily FY128_05090 PF02347 Glycine cleavage system P-protein FY128_05095 PF01597 Glycine cleavage H-protein FY128_05100 PF01571 Aminomethyltransferase folate-binding domain FY128_05100 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY128_05130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY128_05135 PF00849 RNA pseudouridylate synthase FY128_05135 PF01479 S4 domain FY128_05140 PF13419 Haloacid dehalogenase-like hydrolase FY128_05160 PF00756 Putative esterase FY128_05170 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY128_05180 PF00578 AhpC/TSA family FY128_05180 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY128_05185 PF00043 Glutathione S-transferase, C-terminal domain FY128_05185 PF02798 Glutathione S-transferase, N-terminal domain FY128_05205 PF04542 Sigma-70 region 2 FY128_05205 PF08281 Sigma-70, region 4 FY128_05220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_05220 PF03466 LysR substrate binding domain FY128_05225 PF04303 PrpF protein FY128_05235 PF00005 ABC transporter FY128_05240 PF00528 Binding-protein-dependent transport system inner membrane component FY128_05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_05245 PF13426 PAS domain FY128_05245 PF00072 Response regulator receiver domain FY128_05250 PF00072 Response regulator receiver domain FY128_05255 PF13426 PAS domain FY128_05255 PF07536 HWE histidine kinase FY128_05255 PF08447 PAS fold FY128_05260 PF00072 Response regulator receiver domain FY128_05260 PF13426 PAS domain FY128_05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_05270 PF00034 Cytochrome c FY128_05280 PF05199 GMC oxidoreductase FY128_05280 PF00732 GMC oxidoreductase FY128_05290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_05290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_05300 PF00356 Bacterial regulatory proteins, lacI family FY128_05305 PF02653 Branched-chain amino acid transport system / permease component FY128_05310 PF02653 Branched-chain amino acid transport system / permease component FY128_05315 PF00005 ABC transporter FY128_05320 PF13407 Periplasmic binding protein domain FY128_05335 PF13649 Methyltransferase domain FY128_05340 PF00654 Voltage gated chloride channel FY128_05345 PF03099 Biotin/lipoate A/B protein ligase family FY128_05345 PF12706 Beta-lactamase superfamily domain FY128_05350 PF01026 TatD related DNase FY128_05355 PF08264 Anticodon-binding domain of tRNA FY128_05355 PF09334 tRNA synthetases class I (M) FY128_05360 PF09115 DNA polymerase III, delta subunit, C terminal FY128_05365 PF02223 Thymidylate kinase FY128_05370 PF00768 D-alanyl-D-alanine carboxypeptidase FY128_05370 PF07943 Penicillin-binding protein 5, C-terminal domain FY128_05375 PF05036 Sporulation related domain FY128_05375 PF03330 Lytic transglycolase FY128_05415 PF03989 DNA gyrase C-terminal domain, beta-propeller FY128_05415 PF00521 DNA gyrase/topoisomerase IV, subunit A FY128_05420 PF01914 MarC family integral membrane protein FY128_05425 PF00571 CBS domain FY128_05425 PF02272 DHHA1 domain FY128_05425 PF01743 Poly A polymerase head domain FY128_05425 PF01368 DHH family FY128_05430 PF00436 Single-strand binding protein family FY128_05435 PF17755 UvrA DNA-binding domain FY128_05435 PF17760 UvrA interaction domain FY128_05445 PF01207 Dihydrouridine synthase (Dus) FY128_05450 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY128_05455 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_05465 PF00950 ABC 3 transport family FY128_05470 PF00005 ABC transporter FY128_05475 PF01297 Zinc-uptake complex component A periplasmic FY128_05490 PF00248 Aldo/keto reductase family FY128_05500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY128_05500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_05505 PF03597 Cytochrome oxidase maturation protein cbb3-type FY128_05515 PF05751 FixH FY128_05520 PF13746 4Fe-4S dicluster domain FY128_05520 PF12801 4Fe-4S binding domain FY128_05520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY128_05535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY128_05535 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY128_05550 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY128_05555 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY128_05570 PF09278 MerR, DNA binding FY128_05570 PF00376 MerR family regulatory protein FY128_05575 PF00571 CBS domain FY128_05575 PF01769 Divalent cation transporter FY128_05575 PF03448 MgtE intracellular N domain FY128_05580 PF00384 Molybdopterin oxidoreductase FY128_05590 PF01327 Polypeptide deformylase FY128_05610 PF03099 Biotin/lipoate A/B protein ligase family FY128_05615 PF08240 Alcohol dehydrogenase GroES-like domain FY128_05615 PF00107 Zinc-binding dehydrogenase FY128_05640 PF07549 SecD/SecF GG Motif FY128_05640 PF02355 Protein export membrane protein FY128_05645 PF02699 Preprotein translocase subunit FY128_05655 PF08240 Alcohol dehydrogenase GroES-like domain FY128_05655 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY128_05665 PF00067 Cytochrome P450 FY128_05675 PF06426 Serine acetyltransferase, N-terminal FY128_05675 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_05680 PF00561 alpha/beta hydrolase fold FY128_05690 PF01494 FAD binding domain FY128_05695 PF01053 Cys/Met metabolism PLP-dependent enzyme FY128_05700 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_05705 PF00528 Binding-protein-dependent transport system inner membrane component FY128_05710 PF00528 Binding-protein-dependent transport system inner membrane component FY128_05715 PF00005 ABC transporter FY128_05730 PF01368 DHH family FY128_05730 PF02272 DHHA1 domain FY128_05730 PF17768 RecJ OB domain FY128_05740 PF03447 Homoserine dehydrogenase, NAD binding domain FY128_05740 PF00742 Homoserine dehydrogenase FY128_05740 PF01842 ACT domain FY128_05745 PF00155 Aminotransferase class I and II FY128_05750 PF01156 Inosine-uridine preferring nucleoside hydrolase FY128_05755 PF01925 Sulfite exporter TauE/SafE FY128_05770 PF08240 Alcohol dehydrogenase GroES-like domain FY128_05770 PF00107 Zinc-binding dehydrogenase FY128_05775 PF00109 Beta-ketoacyl synthase, N-terminal domain FY128_05775 PF02801 Beta-ketoacyl synthase, C-terminal domain FY128_05790 PF07977 FabA-like domain FY128_05795 PF00550 Phosphopantetheine attachment site FY128_05800 PF04055 Radical SAM superfamily FY128_05805 PF00027 Cyclic nucleotide-binding domain FY128_05805 PF13545 Crp-like helix-turn-helix domain FY128_05815 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY128_05820 PF03749 Sugar fermentation stimulation protein RE domain FY128_05820 PF17746 SfsA N-terminal OB domain FY128_05825 PF00557 Metallopeptidase family M24 FY128_05830 PF04002 RadC-like JAB domain FY128_05845 PF01474 Class-II DAHP synthetase family FY128_05850 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_05850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY128_05860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY128_05865 PF13419 Haloacid dehalogenase-like hydrolase FY128_05880 PF10415 Fumarase C C-terminus FY128_05880 PF00206 Lyase FY128_05890 PF06418 CTP synthase N-terminus FY128_05890 PF00117 Glutamine amidotransferase class-I FY128_05895 PF03840 Preprotein translocase SecG subunit FY128_05900 PF00121 Triosephosphate isomerase FY128_05910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_05910 PF00986 DNA gyrase B subunit, carboxyl terminus FY128_05910 PF01751 Toprim domain FY128_05910 PF00204 DNA gyrase B FY128_05915 PF00574 Clp protease FY128_05925 PF01022 Bacterial regulatory protein, arsR family FY128_05930 PF13091 PLD-like domain FY128_05935 PF00072 Response regulator receiver domain FY128_05940 PF01266 FAD dependent oxidoreductase FY128_05940 PF16350 FAD dependent oxidoreductase central domain FY128_05940 PF01571 Aminomethyltransferase folate-binding domain FY128_05940 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY128_05955 PF00924 Mechanosensitive ion channel FY128_05955 PF12795 Mechanosensitive ion channel porin domain FY128_05955 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY128_06020 PF00005 ABC transporter FY128_06025 PF02405 Permease MlaE FY128_06030 PF13378 Enolase C-terminal domain-like FY128_06030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_06040 PF00390 Malic enzyme, N-terminal domain FY128_06040 PF03949 Malic enzyme, NAD binding domain FY128_06040 PF01515 Phosphate acetyl/butaryl transferase FY128_06050 PF00881 Nitroreductase family FY128_06055 PF07676 WD40-like Beta Propeller Repeat FY128_06065 PF00795 Carbon-nitrogen hydrolase FY128_06065 PF02540 NAD synthase FY128_06070 PF00884 Sulfatase FY128_06080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_06080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY128_06095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY128_06095 PF05698 Bacterial trigger factor protein (TF) C-terminus FY128_06095 PF05697 Bacterial trigger factor protein (TF) FY128_06115 PF01134 Glucose inhibited division protein A FY128_06135 PF08240 Alcohol dehydrogenase GroES-like domain FY128_06135 PF00107 Zinc-binding dehydrogenase FY128_06145 PF00550 Phosphopantetheine attachment site FY128_06150 PF00975 Thioesterase domain FY128_06150 PF00550 Phosphopantetheine attachment site FY128_06150 PF00668 Condensation domain FY128_06150 PF13193 AMP-binding enzyme C-terminal domain FY128_06150 PF00501 AMP-binding enzyme FY128_06155 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY128_06155 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY128_06160 PF04715 Anthranilate synthase component I, N terminal region FY128_06160 PF00425 chorismate binding enzyme FY128_06160 PF00117 Glutamine amidotransferase class-I FY128_06165 PF01702 Queuine tRNA-ribosyltransferase FY128_06170 PF02547 Queuosine biosynthesis protein FY128_06175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY128_06180 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY128_06185 PF01467 Cytidylyltransferase-like FY128_06200 PF02885 Glycosyl transferase family, helical bundle domain FY128_06200 PF00591 Glycosyl transferase family, a/b domain FY128_06205 PF00218 Indole-3-glycerol phosphate synthase FY128_06210 PF01967 MoaC family FY128_06215 PF03453 MoeA N-terminal region (domain I and II) FY128_06215 PF03454 MoeA C-terminal region (domain IV) FY128_06215 PF00994 Probable molybdopterin binding domain FY128_06220 PF00990 Diguanylate cyclase, GGDEF domain FY128_06220 PF17158 Membrane-associated sensor, integral membrane domain FY128_06230 PF02254 TrkA-N domain FY128_06230 PF00999 Sodium/hydrogen exchanger family FY128_06240 PF04055 Radical SAM superfamily FY128_06240 PF06463 Molybdenum Cofactor Synthesis C FY128_06245 PF00892 EamA-like transporter family FY128_06250 PF07690 Major Facilitator Superfamily FY128_06255 PF12804 MobA-like NTP transferase domain FY128_06260 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY128_06265 PF01551 Peptidase family M23 FY128_06275 PF01975 Survival protein SurE FY128_06280 PF02403 Seryl-tRNA synthetase N-terminal domain FY128_06280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY128_06285 PF00902 Sec-independent protein translocase protein (TatC) FY128_06290 PF02416 mttA/Hcf106 family FY128_06295 PF02416 mttA/Hcf106 family FY128_06300 PF04079 Segregation and condensation complex subunit ScpB FY128_06305 PF02616 Segregation and condensation protein ScpA FY128_06310 PF00933 Glycosyl hydrolase family 3 N terminal domain FY128_06320 PF00750 tRNA synthetases class I (R) FY128_06320 PF03485 Arginyl tRNA synthetase N terminal domain FY128_06320 PF05746 DALR anticodon binding domain FY128_06325 PF13286 Phosphohydrolase-associated domain FY128_06325 PF01966 HD domain FY128_06330 PF01521 Iron-sulphur cluster biosynthesis FY128_06340 PF08238 Sel1 repeat FY128_06355 PF10458 Valyl tRNA synthetase tRNA binding arm FY128_06355 PF00133 tRNA synthetases class I (I, L, M and V) FY128_06355 PF08264 Anticodon-binding domain of tRNA FY128_06390 PF03358 NADPH-dependent FMN reductase FY128_06395 PF00994 Probable molybdopterin binding domain FY128_06395 PF02464 Competence-damaged protein FY128_06395 PF18146 Damage-inducible protein CinA KH domain FY128_06400 PF00582 Universal stress protein family FY128_06405 PF00156 Phosphoribosyl transferase domain FY128_06415 PF02867 Ribonucleotide reductase, barrel domain FY128_06415 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY128_06425 PF01566 Natural resistance-associated macrophage protein FY128_06435 PF00005 ABC transporter FY128_06435 PF00664 ABC transporter transmembrane region FY128_06440 PF01594 AI-2E family transporter FY128_06445 PF00583 Acetyltransferase (GNAT) family FY128_06475 PF03129 Anticodon binding domain FY128_06475 PF02824 TGS domain FY128_06475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY128_06475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY128_06485 PF01809 Putative membrane protein insertion efficiency factor FY128_06495 PF01227 GTP cyclohydrolase I FY128_06500 PF01502 Phosphoribosyl-AMP cyclohydrolase FY128_06505 PF01734 Patatin-like phospholipase FY128_06510 PF00571 CBS domain FY128_06510 PF00478 IMP dehydrogenase / GMP reductase domain FY128_06540 PF03313 Serine dehydratase alpha chain FY128_06540 PF03315 Serine dehydratase beta chain FY128_06575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_06575 PF03466 LysR substrate binding domain FY128_06585 PF01965 DJ-1/PfpI family FY128_06585 PF12833 Helix-turn-helix domain FY128_06590 PF01256 Carbohydrate kinase FY128_06590 PF03853 YjeF-related protein N-terminus FY128_06595 PF00543 Nitrogen regulatory protein P-II FY128_06600 PF03951 Glutamine synthetase, beta-Grasp domain FY128_06600 PF00120 Glutamine synthetase, catalytic domain FY128_06610 PF08755 Hemimethylated DNA-binding protein YccV like FY128_06620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_06630 PF00892 EamA-like transporter family FY128_06640 PF02559 CarD-like/TRCF domain FY128_06640 PF17757 UvrB interaction domain FY128_06640 PF00271 Helicase conserved C-terminal domain FY128_06640 PF03461 TRCF domain FY128_06640 PF00270 DEAD/DEAH box helicase FY128_06650 PF17191 RecG wedge domain FY128_06650 PF00271 Helicase conserved C-terminal domain FY128_06650 PF00270 DEAD/DEAH box helicase FY128_06665 PF01850 PIN domain FY128_06680 PF01380 SIS domain FY128_06685 PF12804 MobA-like NTP transferase domain FY128_06685 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_06685 PF14602 Hexapeptide repeat of succinyl-transferase FY128_06690 PF07729 FCD domain FY128_06690 PF00392 Bacterial regulatory proteins, gntR family FY128_06695 PF02608 ABC transporter substrate-binding protein PnrA-like FY128_06700 PF02653 Branched-chain amino acid transport system / permease component FY128_06705 PF02653 Branched-chain amino acid transport system / permease component FY128_06710 PF00005 ABC transporter FY128_06720 PF01494 FAD binding domain FY128_06725 PF03547 Membrane transport protein FY128_06730 PF02683 Cytochrome C biogenesis protein transmembrane region FY128_06750 PF12900 Pyridoxamine 5'-phosphate oxidase FY128_06765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_06770 PF00313 'Cold-shock' DNA-binding domain FY128_06820 PF00005 ABC transporter FY128_06820 PF02687 FtsX-like permease family FY128_06820 PF12704 MacB-like periplasmic core domain FY128_06825 PF12704 MacB-like periplasmic core domain FY128_06825 PF02687 FtsX-like permease family FY128_06825 PF00005 ABC transporter FY128_06835 PF01521 Iron-sulphur cluster biosynthesis FY128_06840 PF01883 Iron-sulfur cluster assembly protein FY128_06845 PF00266 Aminotransferase class-V FY128_06850 PF01458 Uncharacterized protein family (UPF0051) FY128_06855 PF00005 ABC transporter FY128_06860 PF01458 Uncharacterized protein family (UPF0051) FY128_06865 PF00266 Aminotransferase class-V FY128_06870 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY128_06875 PF03702 Anhydro-N-acetylmuramic acid kinase FY128_06880 PF00579 tRNA synthetases class I (W and Y) FY128_06890 PF00578 AhpC/TSA family FY128_06895 PF04305 Protein of unknown function (DUF455) FY128_06900 PF01476 LysM domain FY128_06900 PF08525 Opacity-associated protein A N-terminal motif FY128_06900 PF01551 Peptidase family M23 FY128_06905 PF00271 Helicase conserved C-terminal domain FY128_06905 PF00270 DEAD/DEAH box helicase FY128_06920 PF00834 Ribulose-phosphate 3 epimerase family FY128_06930 PF10397 Adenylosuccinate lyase C-terminus FY128_06930 PF00206 Lyase FY128_06940 PF01259 SAICAR synthetase FY128_06945 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY128_06965 PF00392 Bacterial regulatory proteins, gntR family FY128_06965 PF00155 Aminotransferase class I and II FY128_06975 PF00586 AIR synthase related protein, N-terminal domain FY128_06975 PF02769 AIR synthase related protein, C-terminal domain FY128_06975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY128_07000 PF00462 Glutaredoxin FY128_07005 PF07690 Major Facilitator Superfamily FY128_07010 PF00459 Inositol monophosphatase family FY128_07015 PF00459 Inositol monophosphatase family FY128_07020 PF01171 PP-loop family FY128_07025 PF04960 Glutaminase FY128_07030 PF00163 Ribosomal protein S4/S9 N-terminal domain FY128_07030 PF01479 S4 domain FY128_07035 PF03741 Integral membrane protein TerC family FY128_07050 PF00892 EamA-like transporter family FY128_07055 PF01810 LysE type translocator FY128_07065 PF01177 Asp/Glu/Hydantoin racemase FY128_07070 PF00588 SpoU rRNA Methylase family FY128_07080 PF00180 Isocitrate/isopropylmalate dehydrogenase FY128_07095 PF01411 tRNA synthetases class II (A) FY128_07095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY128_07095 PF02272 DHHA1 domain FY128_07100 PF00154 recA bacterial DNA recombination protein FY128_07105 PF00294 pfkB family carbohydrate kinase FY128_07110 PF04227 Indigoidine synthase A like protein FY128_07115 PF00691 OmpA family FY128_07115 PF01389 OmpA-like transmembrane domain FY128_07120 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_07125 PF00528 Binding-protein-dependent transport system inner membrane component FY128_07130 PF00528 Binding-protein-dependent transport system inner membrane component FY128_07135 PF06233 Usg-like family FY128_07140 PF08241 Methyltransferase domain FY128_07145 PF09084 NMT1/THI5 like FY128_07150 PF01037 Lrp/AsnC ligand binding domain FY128_07150 PF13404 AsnC-type helix-turn-helix domain FY128_07155 PF03167 Uracil DNA glycosylase superfamily FY128_07165 PF00989 PAS fold FY128_07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_07165 PF00512 His Kinase A (phospho-acceptor) domain FY128_07170 PF01219 Prokaryotic diacylglycerol kinase FY128_07175 PF02277 Phosphoribosyltransferase FY128_07180 PF02654 Cobalamin-5-phosphate synthase FY128_07195 PF01061 ABC-2 type transporter FY128_07200 PF00005 ABC transporter FY128_07205 PF01925 Sulfite exporter TauE/SafE FY128_07215 PF00672 HAMP domain FY128_07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_07215 PF17200 Single Cache domain 2 FY128_07215 PF00672 HAMP domain FY128_07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_07215 PF17200 Single Cache domain 2 FY128_07225 PF00004 ATPase family associated with various cellular activities (AAA) FY128_07225 PF12002 MgsA AAA+ ATPase C terminal FY128_07225 PF16193 AAA C-terminal domain FY128_07230 PF00595 PDZ domain FY128_07230 PF13180 PDZ domain FY128_07245 PF00920 Dehydratase family FY128_07250 PF00174 Oxidoreductase molybdopterin binding domain FY128_07255 PF01794 Ferric reductase like transmembrane component FY128_07265 PF05675 Protein of unknown function (DUF817) FY128_07275 PF01196 Ribosomal protein L17 FY128_07280 PF01000 RNA polymerase Rpb3/RpoA insert domain FY128_07280 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY128_07280 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY128_07285 PF00411 Ribosomal protein S11 FY128_07290 PF00416 Ribosomal protein S13/S18 FY128_07300 PF00344 SecY translocase FY128_07305 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY128_07310 PF00327 Ribosomal protein L30p/L7e FY128_07315 PF00333 Ribosomal protein S5, N-terminal domain FY128_07315 PF03719 Ribosomal protein S5, C-terminal domain FY128_07320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY128_07325 PF00347 Ribosomal protein L6 FY128_07330 PF00410 Ribosomal protein S8 FY128_07335 PF00253 Ribosomal protein S14p/S29e FY128_07340 PF00281 Ribosomal protein L5 FY128_07340 PF00673 ribosomal L5P family C-terminus FY128_07345 PF00467 KOW motif FY128_07345 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY128_07350 PF00238 Ribosomal protein L14p/L23e FY128_07355 PF00366 Ribosomal protein S17 FY128_07360 PF00831 Ribosomal L29 protein FY128_07365 PF00252 Ribosomal protein L16p/L10e FY128_07370 PF07650 KH domain FY128_07370 PF00189 Ribosomal protein S3, C-terminal domain FY128_07375 PF00237 Ribosomal protein L22p/L17e FY128_07380 PF00203 Ribosomal protein S19 FY128_07385 PF00181 Ribosomal Proteins L2, RNA binding domain FY128_07385 PF03947 Ribosomal Proteins L2, C-terminal domain FY128_07390 PF00276 Ribosomal protein L23 FY128_07395 PF00573 Ribosomal protein L4/L1 family FY128_07400 PF00297 Ribosomal protein L3 FY128_07405 PF00338 Ribosomal protein S10p/S20e FY128_07410 PF00009 Elongation factor Tu GTP binding domain FY128_07410 PF03144 Elongation factor Tu domain 2 FY128_07410 PF03143 Elongation factor Tu C-terminal domain FY128_07415 PF00679 Elongation factor G C-terminus FY128_07415 PF14492 Elongation Factor G, domain II FY128_07415 PF03764 Elongation factor G, domain IV FY128_07415 PF00009 Elongation factor Tu GTP binding domain FY128_07415 PF03144 Elongation factor Tu domain 2 FY128_07420 PF00177 Ribosomal protein S7p/S5e FY128_07425 PF00164 Ribosomal protein S12/S23 FY128_07440 PF04998 RNA polymerase Rpb1, domain 5 FY128_07440 PF04997 RNA polymerase Rpb1, domain 1 FY128_07440 PF00623 RNA polymerase Rpb1, domain 2 FY128_07440 PF04983 RNA polymerase Rpb1, domain 3 FY128_07440 PF05000 RNA polymerase Rpb1, domain 4 FY128_07445 PF04561 RNA polymerase Rpb2, domain 2 FY128_07445 PF04560 RNA polymerase Rpb2, domain 7 FY128_07445 PF00562 RNA polymerase Rpb2, domain 6 FY128_07445 PF10385 RNA polymerase beta subunit external 1 domain FY128_07445 PF04563 RNA polymerase beta subunit FY128_07445 PF04565 RNA polymerase Rpb2, domain 3 FY128_07455 PF00542 Ribosomal protein L7/L12 C-terminal domain FY128_07455 PF16320 Ribosomal protein L7/L12 dimerisation domain FY128_07460 PF00466 Ribosomal protein L10 FY128_07465 PF00687 Ribosomal protein L1p/L10e family FY128_07470 PF00298 Ribosomal protein L11, RNA binding domain FY128_07470 PF03946 Ribosomal protein L11, N-terminal domain FY128_07475 PF00467 KOW motif FY128_07475 PF02357 Transcription termination factor nusG FY128_07480 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY128_07495 PF00009 Elongation factor Tu GTP binding domain FY128_07495 PF03143 Elongation factor Tu C-terminal domain FY128_07495 PF03144 Elongation factor Tu domain 2 FY128_07500 PF03741 Integral membrane protein TerC family FY128_07530 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY128_07530 PF00588 SpoU rRNA Methylase family FY128_07535 PF03061 Thioesterase superfamily FY128_07560 PF13460 NAD(P)H-binding FY128_07565 PF01638 HxlR-like helix-turn-helix FY128_07575 PF17757 UvrB interaction domain FY128_07575 PF00271 Helicase conserved C-terminal domain FY128_07575 PF04851 Type III restriction enzyme, res subunit FY128_07575 PF12344 Ultra-violet resistance protein B FY128_07575 PF02151 UvrB/uvrC motif FY128_07580 PF00756 Putative esterase FY128_07580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY128_07600 PF00226 DnaJ domain FY128_07600 PF01556 DnaJ C terminal domain FY128_07600 PF00684 DnaJ central domain FY128_07615 PF17151 Periplasmic sensor domain FY128_07615 PF00990 Diguanylate cyclase, GGDEF domain FY128_07625 PF08402 TOBE domain FY128_07625 PF00005 ABC transporter FY128_07630 PF00528 Binding-protein-dependent transport system inner membrane component FY128_07635 PF01547 Bacterial extracellular solute-binding protein FY128_07640 PF00155 Aminotransferase class I and II FY128_07655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY128_07655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY128_07660 PF00440 Bacterial regulatory proteins, tetR family FY128_07665 PF06719 AraC-type transcriptional regulator N-terminus FY128_07665 PF12833 Helix-turn-helix domain FY128_07670 PF08240 Alcohol dehydrogenase GroES-like domain FY128_07670 PF00107 Zinc-binding dehydrogenase FY128_07675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_07680 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY128_07685 PF03472 Autoinducer binding domain FY128_07685 PF00196 Bacterial regulatory proteins, luxR family FY128_07690 PF13538 UvrD-like helicase C-terminal domain FY128_07690 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY128_07690 PF14490 Helix-hairpin-helix containing domain FY128_07695 PF08338 Domain of unknown function (DUF1731) FY128_07695 PF01370 NAD dependent epimerase/dehydratase family FY128_07720 PF08281 Sigma-70, region 4 FY128_07720 PF04542 Sigma-70 region 2 FY128_07730 PF01810 LysE type translocator FY128_07735 PF00248 Aldo/keto reductase family FY128_07750 PF10369 Small subunit of acetolactate synthase FY128_07755 PF00205 Thiamine pyrophosphate enzyme, central domain FY128_07755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY128_07755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY128_07775 PF13302 Acetyltransferase (GNAT) domain FY128_07785 PF13180 PDZ domain FY128_07790 PF01145 SPFH domain / Band 7 family FY128_07795 PF01145 SPFH domain / Band 7 family FY128_07800 PF00186 Dihydrofolate reductase FY128_07805 PF00303 Thymidylate synthase FY128_07845 PF02913 FAD linked oxidases, C-terminal domain FY128_07845 PF01565 FAD binding domain FY128_07850 PF00873 AcrB/AcrD/AcrF family FY128_07855 PF13533 Biotin-lipoyl like FY128_07865 PF13361 UvrD-like helicase C-terminal domain FY128_07865 PF00580 UvrD/REP helicase N-terminal domain FY128_07875 PF00440 Bacterial regulatory proteins, tetR family FY128_07875 PF13977 BetI-type transcriptional repressor, C-terminal FY128_07880 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY128_07885 PF00561 alpha/beta hydrolase fold FY128_07905 PF00857 Isochorismatase family FY128_07925 PF00557 Metallopeptidase family M24 FY128_07925 PF01321 Creatinase/Prolidase N-terminal domain FY128_07935 PF02630 SCO1/SenC FY128_07945 PF01584 CheW-like domain FY128_07955 PF00929 Exonuclease FY128_07960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_07960 PF03466 LysR substrate binding domain FY128_07970 PF00583 Acetyltransferase (GNAT) family FY128_07980 PF12826 Helix-hairpin-helix motif FY128_07980 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY128_07980 PF01653 NAD-dependent DNA ligase adenylation domain FY128_07980 PF00533 BRCA1 C Terminus (BRCT) domain FY128_07980 PF03120 NAD-dependent DNA ligase OB-fold domain FY128_07985 PF01810 LysE type translocator FY128_07990 PF02463 RecF/RecN/SMC N terminal domain FY128_07995 PF13525 Outer membrane lipoprotein FY128_08000 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY128_08005 PF12327 FtsZ family, C-terminal domain FY128_08005 PF00091 Tubulin/FtsZ family, GTPase domain FY128_08010 PF02491 SHS2 domain inserted in FTSA FY128_08015 PF08478 POTRA domain, FtsQ-type FY128_08015 PF03799 Cell division protein FtsQ FY128_08020 PF07478 D-ala D-ala ligase C-terminus FY128_08020 PF01820 D-ala D-ala ligase N-terminus FY128_08025 PF07690 Major Facilitator Superfamily FY128_08025 PF00083 Sugar (and other) transporter FY128_08030 PF00990 Diguanylate cyclase, GGDEF domain FY128_08035 PF01565 FAD binding domain FY128_08035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY128_08040 PF08245 Mur ligase middle domain FY128_08040 PF01225 Mur ligase family, catalytic domain FY128_08040 PF02875 Mur ligase family, glutamate ligase domain FY128_08045 PF04101 Glycosyltransferase family 28 C-terminal domain FY128_08045 PF03033 Glycosyltransferase family 28 N-terminal domain FY128_08050 PF01098 Cell cycle protein FY128_08055 PF02875 Mur ligase family, glutamate ligase domain FY128_08055 PF08245 Mur ligase middle domain FY128_08060 PF00953 Glycosyl transferase family 4 FY128_08060 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY128_08065 PF08245 Mur ligase middle domain FY128_08065 PF02875 Mur ligase family, glutamate ligase domain FY128_08065 PF01225 Mur ligase family, catalytic domain FY128_08070 PF01225 Mur ligase family, catalytic domain FY128_08070 PF08245 Mur ligase middle domain FY128_08070 PF02875 Mur ligase family, glutamate ligase domain FY128_08075 PF03717 Penicillin-binding Protein dimerisation domain FY128_08075 PF00905 Penicillin binding protein transpeptidase domain FY128_08085 PF01795 MraW methylase family FY128_08090 PF02381 MraZ protein, putative antitoxin-like FY128_08115 PF01510 N-acetylmuramoyl-L-alanine amidase FY128_08120 PF05099 Tellurite resistance protein TerB FY128_08120 PF00226 DnaJ domain FY128_08125 PF00365 Phosphofructokinase FY128_08145 PF13649 Methyltransferase domain FY128_08150 PF01183 Glycosyl hydrolases family 25 FY128_08160 PF02219 Methylenetetrahydrofolate reductase FY128_08165 PF01209 ubiE/COQ5 methyltransferase family FY128_08170 PF12848 ABC transporter FY128_08170 PF00005 ABC transporter FY128_08175 PF12146 Serine aminopeptidase, S33 FY128_08180 PF02515 CoA-transferase family III FY128_08185 PF00205 Thiamine pyrophosphate enzyme, central domain FY128_08185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY128_08185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY128_08195 PF01042 Endoribonuclease L-PSP FY128_08210 PF01476 LysM domain FY128_08210 PF03734 L,D-transpeptidase catalytic domain FY128_08215 PF07690 Major Facilitator Superfamily FY128_08225 PF10609 NUBPL iron-transfer P-loop NTPase FY128_08235 PF00465 Iron-containing alcohol dehydrogenase FY128_08240 PF00171 Aldehyde dehydrogenase family FY128_08245 PF00120 Glutamine synthetase, catalytic domain FY128_08245 PF03951 Glutamine synthetase, beta-Grasp domain FY128_08250 PF13520 Amino acid permease FY128_08260 PF01418 Helix-turn-helix domain, rpiR family FY128_08260 PF01380 SIS domain FY128_08280 PF00005 ABC transporter FY128_08280 PF08402 TOBE domain FY128_08285 PF08240 Alcohol dehydrogenase GroES-like domain FY128_08285 PF00107 Zinc-binding dehydrogenase FY128_08300 PF07690 Major Facilitator Superfamily FY128_08305 PF02310 B12 binding domain FY128_08305 PF00809 Pterin binding enzyme FY128_08305 PF02574 Homocysteine S-methyltransferase FY128_08305 PF02607 B12 binding domain FY128_08305 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY128_08325 PF13505 Outer membrane protein beta-barrel domain FY128_08340 PF04402 Protein of unknown function (DUF541) FY128_08350 PF01894 Uncharacterised protein family UPF0047 FY128_08355 PF00512 His Kinase A (phospho-acceptor) domain FY128_08355 PF08446 PAS fold FY128_08355 PF00360 Phytochrome region FY128_08355 PF01590 GAF domain FY128_08355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_08365 PF04545 Sigma-70, region 4 FY128_08365 PF00140 Sigma-70 factor, region 1.2 FY128_08365 PF04542 Sigma-70 region 2 FY128_08365 PF03979 Sigma-70 factor, region 1.1 FY128_08365 PF04546 Sigma-70, non-essential region FY128_08365 PF04539 Sigma-70 region 3 FY128_08370 PF10410 DnaB-helicase binding domain of primase FY128_08370 PF08278 DNA primase DnaG DnaB-binding FY128_08370 PF01807 CHC2 zinc finger FY128_08370 PF08275 DNA primase catalytic core, N-terminal domain FY128_08380 PF00117 Glutamine amidotransferase class-I FY128_08380 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY128_08385 PF01554 MatE FY128_08390 PF02743 Cache domain FY128_08390 PF00672 HAMP domain FY128_08390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_08400 PF04228 Putative neutral zinc metallopeptidase FY128_08415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_08415 PF02142 MGS-like domain FY128_08415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY128_08420 PF00990 Diguanylate cyclase, GGDEF domain FY128_08420 PF17158 Membrane-associated sensor, integral membrane domain FY128_08425 PF03167 Uracil DNA glycosylase superfamily FY128_08435 PF01272 Transcription elongation factor, GreA/GreB, C-term FY128_08435 PF03449 Transcription elongation factor, N-terminal FY128_08440 PF00534 Glycosyl transferases group 1 FY128_08445 PF01037 Lrp/AsnC ligand binding domain FY128_08450 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_08455 PF03466 LysR substrate binding domain FY128_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_08465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY128_08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_08480 PF03466 LysR substrate binding domain FY128_08490 PF01699 Sodium/calcium exchanger protein FY128_08495 PF00155 Aminotransferase class I and II FY128_08500 PF05231 MASE1 FY128_08500 PF00563 EAL domain FY128_08515 PF00313 'Cold-shock' DNA-binding domain FY128_08520 PF00753 Metallo-beta-lactamase superfamily FY128_08530 PF12802 MarR family FY128_08535 PF00486 Transcriptional regulatory protein, C terminal FY128_08535 PF00072 Response regulator receiver domain FY128_08540 PF00512 His Kinase A (phospho-acceptor) domain FY128_08540 PF16527 Two-component sensor protein CpxA, periplasmic domain FY128_08540 PF00672 HAMP domain FY128_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_08545 PF01588 Putative tRNA binding domain FY128_08550 PF03807 NADP oxidoreductase coenzyme F420-dependent FY128_08550 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY128_08565 PF01790 Prolipoprotein diacylglyceryl transferase FY128_08575 PF02578 Multi-copper polyphenol oxidoreductase laccase FY128_08590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY128_08590 PF14572 Phosphoribosyl synthetase-associated domain FY128_08600 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY128_08610 PF00535 Glycosyl transferase family 2 FY128_08615 PF00672 HAMP domain FY128_08615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_08620 PF00171 Aldehyde dehydrogenase family FY128_08625 PF13426 PAS domain FY128_08625 PF02954 Bacterial regulatory protein, Fis family FY128_08625 PF00158 Sigma-54 interaction domain FY128_08630 PF03707 Bacterial signalling protein N terminal repeat FY128_08630 PF00990 Diguanylate cyclase, GGDEF domain FY128_08630 PF13188 PAS domain FY128_08630 PF00563 EAL domain FY128_08635 PF14693 Ribosomal protein TL5, C-terminal domain FY128_08635 PF01386 Ribosomal L25p family FY128_08640 PF08448 PAS fold FY128_08640 PF00563 EAL domain FY128_08640 PF00990 Diguanylate cyclase, GGDEF domain FY128_08640 PF08447 PAS fold FY128_08650 PF01195 Peptidyl-tRNA hydrolase FY128_08660 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY128_08665 PF01926 50S ribosome-binding GTPase FY128_08665 PF06071 Protein of unknown function (DUF933) FY128_08685 PF00156 Phosphoribosyl transferase domain FY128_08695 PF00032 Cytochrome b(C-terminal)/b6/petD FY128_08695 PF02167 Cytochrome C1 family FY128_08695 PF00033 Cytochrome b/b6/petB FY128_08700 PF00033 Cytochrome b/b6/petB FY128_08700 PF00032 Cytochrome b(C-terminal)/b6/petD FY128_08705 PF00355 Rieske [2Fe-2S] domain FY128_08705 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY128_08715 PF00664 ABC transporter transmembrane region FY128_08715 PF00005 ABC transporter FY128_08720 PF00664 ABC transporter transmembrane region FY128_08720 PF00005 ABC transporter FY128_08725 PF00588 SpoU rRNA Methylase family FY128_08730 PF02690 Na+/Pi-cotransporter FY128_08740 PF01218 Coproporphyrinogen III oxidase FY128_08755 PF01743 Poly A polymerase head domain FY128_08755 PF12627 Probable RNA and SrmB- binding site of polymerase A FY128_08755 PF13735 tRNA nucleotidyltransferase domain 2 putative FY128_08760 PF00293 NUDIX domain FY128_08770 PF17863 AAA lid domain FY128_08770 PF07726 ATPase family associated with various cellular activities (AAA) FY128_08790 PF00583 Acetyltransferase (GNAT) family FY128_08795 PF07690 Major Facilitator Superfamily FY128_08805 PF13409 Glutathione S-transferase, N-terminal domain FY128_08820 PF08502 LeuA allosteric (dimerisation) domain FY128_08820 PF00682 HMGL-like FY128_08825 PF03594 Benzoate membrane transport protein FY128_08830 PF06532 Negative regulator of sigma F FY128_08835 PF04542 Sigma-70 region 2 FY128_08835 PF04545 Sigma-70, region 4 FY128_08845 PF00574 Clp protease FY128_08850 PF04955 HupE / UreJ protein FY128_08860 PF14489 QueF-like protein FY128_08865 PF01545 Cation efflux family FY128_08865 PF16916 Dimerisation domain of Zinc Transporter FY128_08875 PF13458 Periplasmic binding protein FY128_08885 PF01022 Bacterial regulatory protein, arsR family FY128_08895 PF00571 CBS domain FY128_08895 PF00005 ABC transporter FY128_08900 PF00528 Binding-protein-dependent transport system inner membrane component FY128_08905 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY128_08910 PF00265 Thymidine kinase FY128_08915 PF00127 Copper binding proteins, plastocyanin/azurin family FY128_08925 PF03472 Autoinducer binding domain FY128_08925 PF00196 Bacterial regulatory proteins, luxR family FY128_08930 PF03350 Uncharacterized protein family, UPF0114 FY128_08940 PF07715 TonB-dependent Receptor Plug Domain FY128_08940 PF04886 PT repeat FY128_08940 PF00593 TonB dependent receptor FY128_08950 PF04715 Anthranilate synthase component I, N terminal region FY128_08950 PF00117 Glutamine amidotransferase class-I FY128_08950 PF00425 chorismate binding enzyme FY128_08955 PF11871 Domain of unknown function (DUF3391) FY128_08955 PF01966 HD domain FY128_08960 PF13382 Adenine deaminase C-terminal domain FY128_08960 PF01979 Amidohydrolase family FY128_08965 PF00583 Acetyltransferase (GNAT) family FY128_08970 PF00128 Alpha amylase, catalytic domain FY128_08975 PF00294 pfkB family carbohydrate kinase FY128_08990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY128_08990 PF01926 50S ribosome-binding GTPase FY128_09010 PF05992 SbmA/BacA-like family FY128_09020 PF00557 Metallopeptidase family M24 FY128_09035 PF00111 2Fe-2S iron-sulfur cluster binding domain FY128_09035 PF01799 [2Fe-2S] binding domain FY128_09040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY128_09040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY128_09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_09050 PF03466 LysR substrate binding domain FY128_09065 PF01979 Amidohydrolase family FY128_09080 PF01070 FMN-dependent dehydrogenase FY128_09085 PF00893 Small Multidrug Resistance protein FY128_09090 PF17932 Tetracyclin repressor-like, C-terminal domain FY128_09090 PF00440 Bacterial regulatory proteins, tetR family FY128_09095 PF07943 Penicillin-binding protein 5, C-terminal domain FY128_09095 PF00768 D-alanyl-D-alanine carboxypeptidase FY128_09105 PF00576 HIUase/Transthyretin family FY128_09110 PF04115 Ureidoglycolate lyase FY128_09125 PF09349 OHCU decarboxylase FY128_09125 PF01014 Uricase FY128_09135 PF06299 Protein of unknown function (DUF1045) FY128_09140 PF01266 FAD dependent oxidoreductase FY128_09145 PF01266 FAD dependent oxidoreductase FY128_09145 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY128_09150 PF01627 Hpt domain FY128_09150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY128_09150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_09150 PF00512 His Kinase A (phospho-acceptor) domain FY128_09150 PF00072 Response regulator receiver domain FY128_09150 PF00672 HAMP domain FY128_09155 PF00271 Helicase conserved C-terminal domain FY128_09155 PF00270 DEAD/DEAH box helicase FY128_09165 PF07681 DoxX FY128_09170 PF01476 LysM domain FY128_09170 PF03734 L,D-transpeptidase catalytic domain FY128_09180 PF14403 Circularly permuted ATP-grasp type 2 FY128_09185 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY128_09185 PF14403 Circularly permuted ATP-grasp type 2 FY128_09190 PF08379 Bacterial transglutaminase-like N-terminal region FY128_09190 PF01841 Transglutaminase-like superfamily FY128_09210 PF00300 Histidine phosphatase superfamily (branch 1) FY128_09220 PF02653 Branched-chain amino acid transport system / permease component FY128_09225 PF00005 ABC transporter FY128_09230 PF13407 Periplasmic binding protein domain FY128_09235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_09235 PF03466 LysR substrate binding domain FY128_09260 PF07690 Major Facilitator Superfamily FY128_09270 PF02607 B12 binding domain FY128_09270 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY128_09270 PF00809 Pterin binding enzyme FY128_09270 PF02574 Homocysteine S-methyltransferase FY128_09270 PF02310 B12 binding domain FY128_09275 PF00528 Binding-protein-dependent transport system inner membrane component FY128_09280 PF00528 Binding-protein-dependent transport system inner membrane component FY128_09285 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_09290 PF00005 ABC transporter FY128_09310 PF00331 Glycosyl hydrolase family 10 FY128_09315 PF00535 Glycosyl transferase family 2 FY128_09330 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY128_09345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY128_09345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY128_09345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY128_09345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY128_09350 PF01152 Bacterial-like globin FY128_09370 PF08362 YcdC-like protein, C-terminal region FY128_09370 PF00440 Bacterial regulatory proteins, tetR family FY128_09375 PF07687 Peptidase dimerisation domain FY128_09375 PF01546 Peptidase family M20/M25/M40 FY128_09380 PF01979 Amidohydrolase family FY128_09385 PF00293 NUDIX domain FY128_09390 PF00005 ABC transporter FY128_09395 PF00528 Binding-protein-dependent transport system inner membrane component FY128_09400 PF00528 Binding-protein-dependent transport system inner membrane component FY128_09415 PF00873 AcrB/AcrD/AcrF family FY128_09425 PF00753 Metallo-beta-lactamase superfamily FY128_09430 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY128_09435 PF01730 UreF FY128_09440 PF02814 UreE urease accessory protein, N-terminal domain FY128_09440 PF05194 UreE urease accessory protein, C-terminal domain FY128_09445 PF08534 Redoxin FY128_09455 PF00449 Urease alpha-subunit, N-terminal domain FY128_09455 PF01979 Amidohydrolase family FY128_09465 PF07007 Lysozyme inhibitor LprI FY128_09475 PF00699 Urease beta subunit FY128_09480 PF06906 Protein of unknown function (DUF1272) FY128_09485 PF00547 Urease, gamma subunit FY128_09490 PF01774 UreD urease accessory protein FY128_09500 PF00005 ABC transporter FY128_09505 PF00005 ABC transporter FY128_09505 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY128_09515 PF02653 Branched-chain amino acid transport system / permease component FY128_09525 PF10931 Protein of unknown function (DUF2735) FY128_09530 PF03951 Glutamine synthetase, beta-Grasp domain FY128_09530 PF00120 Glutamine synthetase, catalytic domain FY128_09540 PF01627 Hpt domain FY128_09540 PF00072 Response regulator receiver domain FY128_09540 PF00989 PAS fold FY128_09540 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY128_09540 PF00512 His Kinase A (phospho-acceptor) domain FY128_09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_09545 PF00072 Response regulator receiver domain FY128_09555 PF13458 Periplasmic binding protein FY128_09565 PF00005 ABC transporter FY128_09570 PF00005 ABC transporter FY128_09570 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY128_09575 PF02653 Branched-chain amino acid transport system / permease component FY128_09575 PF11862 Domain of unknown function (DUF3382) FY128_09580 PF02653 Branched-chain amino acid transport system / permease component FY128_09585 PF00459 Inositol monophosphatase family FY128_09615 PF00486 Transcriptional regulatory protein, C terminal FY128_09615 PF00072 Response regulator receiver domain FY128_09635 PF10090 Histidine phosphotransferase C-terminal domain FY128_09650 PF00588 SpoU rRNA Methylase family FY128_09660 PF00849 RNA pseudouridylate synthase FY128_09675 PF00140 Sigma-70 factor, region 1.2 FY128_09675 PF04542 Sigma-70 region 2 FY128_09675 PF04545 Sigma-70, region 4 FY128_09685 PF00709 Adenylosuccinate synthetase FY128_09710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_09720 PF03167 Uracil DNA glycosylase superfamily FY128_09725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_09730 PF04304 Protein of unknown function (DUF454) FY128_09735 PF00005 ABC transporter FY128_09740 PF01032 FecCD transport family FY128_09745 PF01497 Periplasmic binding protein FY128_09755 PF06228 Haem utilisation ChuX/HutX FY128_09765 PF00551 Formyl transferase FY128_09775 PF00512 His Kinase A (phospho-acceptor) domain FY128_09775 PF00672 HAMP domain FY128_09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_09780 PF00072 Response regulator receiver domain FY128_09780 PF00486 Transcriptional regulatory protein, C terminal FY128_09795 PF03401 Tripartite tricarboxylate transporter family receptor FY128_09805 PF01970 Tripartite tricarboxylate transporter TctA family FY128_09820 PF01032 FecCD transport family FY128_09825 PF01032 FecCD transport family FY128_09830 PF00005 ABC transporter FY128_09835 PF00210 Ferritin-like domain FY128_09850 PF00672 HAMP domain FY128_09850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_09855 PF00248 Aldo/keto reductase family FY128_09860 PF07690 Major Facilitator Superfamily FY128_09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_09865 PF03466 LysR substrate binding domain FY128_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_09870 PF03466 LysR substrate binding domain FY128_09875 PF07859 alpha/beta hydrolase fold FY128_09880 PF13533 Biotin-lipoyl like FY128_09885 PF00873 AcrB/AcrD/AcrF family FY128_09900 PF13091 PLD-like domain FY128_09900 PF13396 Phospholipase_D-nuclease N-terminal FY128_09905 PF08543 Phosphomethylpyrimidine kinase FY128_09910 PF00484 Carbonic anhydrase FY128_09920 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY128_09920 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY128_09930 PF00083 Sugar (and other) transporter FY128_09935 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY128_09935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY128_09935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY128_09940 PF02233 NAD(P) transhydrogenase beta subunit FY128_09945 PF01613 Flavin reductase like domain FY128_09950 PF00881 Nitroreductase family FY128_09955 PF00561 alpha/beta hydrolase fold FY128_09960 PF01042 Endoribonuclease L-PSP FY128_09965 PF00857 Isochorismatase family FY128_09970 PF00296 Luciferase-like monooxygenase FY128_09975 PF01126 Heme oxygenase FY128_09980 PF00701 Dihydrodipicolinate synthetase family FY128_09985 PF00392 Bacterial regulatory proteins, gntR family FY128_09985 PF07729 FCD domain FY128_09995 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10000 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10005 PF03459 TOBE domain FY128_10005 PF17912 MalK OB fold domain FY128_10005 PF00005 ABC transporter FY128_10010 PF00294 pfkB family carbohydrate kinase FY128_10015 PF03576 Peptidase family S58 FY128_10020 PF01063 Amino-transferase class IV FY128_10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_10025 PF03466 LysR substrate binding domain FY128_10035 PF00005 ABC transporter FY128_10035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_10040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_10040 PF00005 ABC transporter FY128_10045 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_10045 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10050 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_10060 PF01244 Membrane dipeptidase (Peptidase family M19) FY128_10070 PF03706 Lysylphosphatidylglycerol synthase TM region FY128_10070 PF09924 Uncharacterised conserved protein (DUF2156) FY128_10090 PF07690 Major Facilitator Superfamily FY128_10100 PF04444 Catechol dioxygenase N terminus FY128_10100 PF00775 Dioxygenase FY128_10105 PF00465 Iron-containing alcohol dehydrogenase FY128_10110 PF04909 Amidohydrolase FY128_10115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY128_10120 PF01613 Flavin reductase like domain FY128_10135 PF00512 His Kinase A (phospho-acceptor) domain FY128_10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_10140 PF00072 Response regulator receiver domain FY128_10140 PF00486 Transcriptional regulatory protein, C terminal FY128_10150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY128_10155 PF00005 ABC transporter FY128_10155 PF08402 TOBE domain FY128_10160 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10175 PF00072 Response regulator receiver domain FY128_10175 PF00486 Transcriptional regulatory protein, C terminal FY128_10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_10180 PF00512 His Kinase A (phospho-acceptor) domain FY128_10180 PF00072 Response regulator receiver domain FY128_10180 PF13188 PAS domain FY128_10180 PF08448 PAS fold FY128_10190 PF13614 AAA domain FY128_10195 PF01339 CheB methylesterase FY128_10195 PF00072 Response regulator receiver domain FY128_10200 PF03705 CheR methyltransferase, all-alpha domain FY128_10200 PF01739 CheR methyltransferase, SAM binding domain FY128_10205 PF01584 CheW-like domain FY128_10210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_10210 PF00672 HAMP domain FY128_10210 PF02203 Tar ligand binding domain homologue FY128_10215 PF01584 CheW-like domain FY128_10220 PF02895 Signal transducing histidine kinase, homodimeric domain FY128_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_10220 PF09078 CheY binding FY128_10220 PF01584 CheW-like domain FY128_10220 PF01627 Hpt domain FY128_10225 PF00072 Response regulator receiver domain FY128_10235 PF00072 Response regulator receiver domain FY128_10240 PF00296 Luciferase-like monooxygenase FY128_10245 PF01613 Flavin reductase like domain FY128_10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_10250 PF03466 LysR substrate binding domain FY128_10255 PF00355 Rieske [2Fe-2S] domain FY128_10260 PF00005 ABC transporter FY128_10265 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_10270 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10275 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10280 PF01565 FAD binding domain FY128_10280 PF02913 FAD linked oxidases, C-terminal domain FY128_10285 PF00155 Aminotransferase class I and II FY128_10290 PF00970 Oxidoreductase FAD-binding domain FY128_10290 PF00042 Globin FY128_10290 PF00175 Oxidoreductase NAD-binding domain FY128_10325 PF01259 SAICAR synthetase FY128_10335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY128_10335 PF00529 HlyD membrane-fusion protein of T1SS FY128_10340 PF00873 AcrB/AcrD/AcrF family FY128_10345 PF02321 Outer membrane efflux protein FY128_10350 PF01132 Elongation factor P (EF-P) OB domain FY128_10350 PF08207 Elongation factor P (EF-P) KOW-like domain FY128_10350 PF09285 Elongation factor P, C-terminal FY128_10355 PF00152 tRNA synthetases class II (D, K and N) FY128_10360 PF12544 Lysine-2,3-aminomutase FY128_10360 PF04055 Radical SAM superfamily FY128_10375 PF03466 LysR substrate binding domain FY128_10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_10380 PF01266 FAD dependent oxidoreductase FY128_10390 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10395 PF03459 TOBE domain FY128_10395 PF00005 ABC transporter FY128_10405 PF03576 Peptidase family S58 FY128_10410 PF05690 Thiazole biosynthesis protein ThiG FY128_10420 PF01266 FAD dependent oxidoreductase FY128_10425 PF13667 ThiC-associated domain FY128_10425 PF01964 Radical SAM ThiC family FY128_10430 PF00550 Phosphopantetheine attachment site FY128_10460 PF00664 ABC transporter transmembrane region FY128_10460 PF00005 ABC transporter FY128_10465 PF00027 Cyclic nucleotide-binding domain FY128_10465 PF13545 Crp-like helix-turn-helix domain FY128_10475 PF00672 HAMP domain FY128_10475 PF00211 Adenylate and Guanylate cyclase catalytic domain FY128_10485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY128_10485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY128_10485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY128_10490 PF13439 Glycosyltransferase Family 4 FY128_10490 PF00534 Glycosyl transferases group 1 FY128_10505 PF00005 ABC transporter FY128_10505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_10510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_10515 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10520 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_10520 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10530 PF13439 Glycosyltransferase Family 4 FY128_10530 PF00534 Glycosyl transferases group 1 FY128_10535 PF03033 Glycosyltransferase family 28 N-terminal domain FY128_10535 PF04101 Glycosyltransferase family 28 C-terminal domain FY128_10540 PF03932 CutC family FY128_10545 PF07690 Major Facilitator Superfamily FY128_10555 PF02838 Glycosyl hydrolase family 20, domain 2 FY128_10555 PF00728 Glycosyl hydrolase family 20, catalytic domain FY128_10565 PF01418 Helix-turn-helix domain, rpiR family FY128_10565 PF01380 SIS domain FY128_10575 PF00005 ABC transporter FY128_10575 PF17912 MalK OB fold domain FY128_10580 PF01547 Bacterial extracellular solute-binding protein FY128_10585 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10590 PF00528 Binding-protein-dependent transport system inner membrane component FY128_10600 PF00392 Bacterial regulatory proteins, gntR family FY128_10600 PF07702 UTRA domain FY128_10605 PF01380 SIS domain FY128_10610 PF01979 Amidohydrolase family FY128_10615 PF00480 ROK family FY128_10620 PF01494 FAD binding domain FY128_10625 PF01569 PAP2 superfamily FY128_10630 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY128_10630 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY128_10630 PF13288 DXP reductoisomerase C-terminal domain FY128_10635 PF00155 Aminotransferase class I and II FY128_10645 PF01103 Surface antigen FY128_10645 PF07244 Surface antigen variable number repeat FY128_10645 PF17243 POTRA domain TamA domain 1 FY128_10655 PF01584 CheW-like domain FY128_10660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_10660 PF13426 PAS domain FY128_10660 PF08447 PAS fold FY128_10665 PF02634 FdhD/NarQ family FY128_10670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY128_10675 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY128_10675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY128_10680 PF00231 ATP synthase FY128_10685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY128_10685 PF00306 ATP synthase alpha/beta chain, C terminal domain FY128_10685 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY128_10690 PF00213 ATP synthase delta (OSCP) subunit FY128_10700 PF17764 3′ DNA-binding domain (3′BD) FY128_10700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY128_10700 PF00270 DEAD/DEAH box helicase FY128_10700 PF18074 Primosomal protein N C-terminal domain FY128_10705 PF00589 Phage integrase family FY128_10705 PF02899 Phage integrase, N-terminal SAM-like domain FY128_10725 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_10725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY128_10730 PF01810 LysE type translocator FY128_10740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY128_10740 PF00364 Biotin-requiring enzyme FY128_10740 PF02817 e3 binding domain FY128_10745 PF16870 2-oxoglutarate dehydrogenase C-terminal FY128_10745 PF02779 Transketolase, pyrimidine binding domain FY128_10745 PF16078 2-oxoglutarate dehydrogenase N-terminus FY128_10745 PF00676 Dehydrogenase E1 component FY128_10750 PF00549 CoA-ligase FY128_10750 PF02629 CoA binding domain FY128_10755 PF00549 CoA-ligase FY128_10755 PF08442 ATP-grasp domain FY128_10760 PF00056 lactate/malate dehydrogenase, NAD binding domain FY128_10760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY128_10765 PF03969 AFG1-like ATPase FY128_10770 PF02974 Protease inhibitor Inh FY128_10775 PF13237 4Fe-4S dicluster domain FY128_10775 PF13085 2Fe-2S iron-sulfur cluster binding domain FY128_10780 PF00890 FAD binding domain FY128_10780 PF02910 Fumarate reductase flavoprotein C-term FY128_10790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY128_10815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY128_10815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY128_10820 PF00814 Glycoprotease family FY128_10825 PF03900 Porphobilinogen deaminase, C-terminal domain FY128_10825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY128_10850 PF00117 Glutamine amidotransferase class-I FY128_10860 PF02325 YGGT family FY128_10865 PF02594 Uncharacterised ACR, YggU family COG1872 FY128_10870 PF00719 Inorganic pyrophosphatase FY128_10880 PF00679 Elongation factor G C-terminus FY128_10880 PF00009 Elongation factor Tu GTP binding domain FY128_10880 PF03144 Elongation factor Tu domain 2 FY128_10885 PF01432 Peptidase family M3 FY128_10895 PF01047 MarR family FY128_10900 PF07690 Major Facilitator Superfamily FY128_10905 PF00764 Arginosuccinate synthase FY128_10910 PF00106 short chain dehydrogenase FY128_10915 PF01810 LysE type translocator FY128_10920 PF00005 ABC transporter FY128_10925 PF02653 Branched-chain amino acid transport system / permease component FY128_10935 PF04055 Radical SAM superfamily FY128_10950 PF01329 Pterin 4 alpha carbinolamine dehydratase FY128_10955 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY128_10960 PF02834 LigT like Phosphoesterase FY128_10965 PF13472 GDSL-like Lipase/Acylhydrolase family FY128_10970 PF00005 ABC transporter FY128_10980 PF01027 Inhibitor of apoptosis-promoting Bax1 FY128_10995 PF00694 Aconitase C-terminal domain FY128_10995 PF00330 Aconitase family (aconitate hydratase) FY128_11000 PF00005 ABC transporter FY128_11005 PF03379 CcmB protein FY128_11010 PF01578 Cytochrome C assembly protein FY128_11020 PF08534 Redoxin FY128_11025 PF00990 Diguanylate cyclase, GGDEF domain FY128_11030 PF10755 Protein of unknown function (DUF2585) FY128_11035 PF04279 Intracellular septation protein A FY128_11040 PF00448 SRP54-type protein, GTPase domain FY128_11040 PF02881 SRP54-type protein, helical bundle domain FY128_11045 PF00919 Uncharacterized protein family UPF0004 FY128_11045 PF04055 Radical SAM superfamily FY128_11050 PF01678 Diaminopimelate epimerase FY128_11055 PF12706 Beta-lactamase superfamily domain FY128_11060 PF00448 SRP54-type protein, GTPase domain FY128_11060 PF02881 SRP54-type protein, helical bundle domain FY128_11060 PF02978 Signal peptide binding domain FY128_11065 PF01817 Chorismate mutase type II FY128_11065 PF02153 Prephenate dehydrogenase FY128_11070 PF00886 Ribosomal protein S16 FY128_11075 PF01782 RimM N-terminal domain FY128_11075 PF05239 PRC-barrel domain FY128_11080 PF01746 tRNA (Guanine-1)-methyltransferase FY128_11090 PF01245 Ribosomal protein L19 FY128_11095 PF00664 ABC transporter transmembrane region FY128_11095 PF00005 ABC transporter FY128_11100 PF00529 HlyD membrane-fusion protein of T1SS FY128_11100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY128_11110 PF07690 Major Facilitator Superfamily FY128_11115 PF00330 Aconitase family (aconitate hydratase) FY128_11120 PF01435 Peptidase family M48 FY128_11125 PF00005 ABC transporter FY128_11130 PF00528 Binding-protein-dependent transport system inner membrane component FY128_11135 PF01547 Bacterial extracellular solute-binding protein FY128_11145 PF00005 ABC transporter FY128_11145 PF16326 ABC transporter C-terminal domain FY128_11155 PF04204 Homoserine O-succinyltransferase FY128_11160 PF01263 Aldose 1-epimerase FY128_11165 PF00912 Transglycosylase FY128_11170 PF00348 Polyprenyl synthetase FY128_11175 PF13488 Glycine zipper FY128_11175 PF00691 OmpA family FY128_11180 PF04551 GcpE protein FY128_11185 PF07690 Major Facilitator Superfamily FY128_11190 PF08220 DeoR-like helix-turn-helix domain FY128_11190 PF00455 DeoR C terminal sensor domain FY128_11195 PF00682 HMGL-like FY128_11195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_11195 PF02436 Conserved carboxylase domain FY128_11195 PF02785 Biotin carboxylase C-terminal domain FY128_11195 PF00364 Biotin-requiring enzyme FY128_11195 PF00289 Biotin carboxylase, N-terminal domain FY128_11200 PF00196 Bacterial regulatory proteins, luxR family FY128_11200 PF00072 Response regulator receiver domain FY128_11205 PF00664 ABC transporter transmembrane region FY128_11205 PF00005 ABC transporter FY128_11210 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY128_11210 PF10091 Putative glucoamylase FY128_11210 PF06165 Glycosyltransferase family 36 FY128_11215 PF07687 Peptidase dimerisation domain FY128_11215 PF01546 Peptidase family M20/M25/M40 FY128_11220 PF01266 FAD dependent oxidoreductase FY128_11225 PF00291 Pyridoxal-phosphate dependent enzyme FY128_11230 PF00920 Dehydratase family FY128_11235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY128_11235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_11240 PF01370 NAD dependent epimerase/dehydratase family FY128_11245 PF01565 FAD binding domain FY128_11245 PF02913 FAD linked oxidases, C-terminal domain FY128_11250 PF07729 FCD domain FY128_11250 PF00392 Bacterial regulatory proteins, gntR family FY128_11260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY128_11265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_11270 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_11275 PF13193 AMP-binding enzyme C-terminal domain FY128_11275 PF16177 Acetyl-coenzyme A synthetase N-terminus FY128_11275 PF00501 AMP-binding enzyme FY128_11285 PF01168 Alanine racemase, N-terminal domain FY128_11290 PF08264 Anticodon-binding domain of tRNA FY128_11290 PF13603 Leucyl-tRNA synthetase, Domain 2 FY128_11290 PF00133 tRNA synthetases class I (I, L, M and V) FY128_11305 PF11953 Domain of unknown function (DUF3470) FY128_11305 PF00037 4Fe-4S binding domain FY128_11310 PF00579 tRNA synthetases class I (W and Y) FY128_11310 PF01479 S4 domain FY128_11320 PF01494 FAD binding domain FY128_11330 PF00543 Nitrogen regulatory protein P-II FY128_11335 PF00909 Ammonium Transporter Family FY128_11340 PF17854 FtsK alpha domain FY128_11340 PF09397 Ftsk gamma domain FY128_11340 PF01580 FtsK/SpoIIIE family FY128_11340 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY128_11345 PF03548 Outer membrane lipoprotein carrier protein LolA FY128_11360 PF00072 Response regulator receiver domain FY128_11360 PF00486 Transcriptional regulatory protein, C terminal FY128_11370 PF02559 CarD-like/TRCF domain FY128_11375 PF05088 Bacterial NAD-glutamate dehydrogenase FY128_11380 PF11700 Vacuole effluxer Atg22 like FY128_11385 PF05233 PHB accumulation regulatory domain FY128_11385 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY128_11390 PF02803 Thiolase, C-terminal domain FY128_11390 PF00108 Thiolase, N-terminal domain FY128_11405 PF00210 Ferritin-like domain FY128_11410 PF00293 NUDIX domain FY128_11420 PF13180 PDZ domain FY128_11420 PF03572 Peptidase family S41 FY128_11430 PF02590 Predicted SPOUT methyltransferase FY128_11440 PF01467 Cytidylyltransferase-like FY128_11445 PF00171 Aldehyde dehydrogenase family FY128_11450 PF01472 PUA domain FY128_11450 PF00696 Amino acid kinase family FY128_11455 PF01926 50S ribosome-binding GTPase FY128_11455 PF01018 GTP1/OBG FY128_11460 PF13302 Acetyltransferase (GNAT) domain FY128_11470 PF01016 Ribosomal L27 protein FY128_11475 PF00829 Ribosomal prokaryotic L21 protein FY128_11490 PF03328 HpcH/HpaI aldolase/citrate lyase family FY128_11500 PF00694 Aconitase C-terminal domain FY128_11505 PF00180 Isocitrate/isopropylmalate dehydrogenase FY128_11510 PF03150 Di-haem cytochrome c peroxidase FY128_11515 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY128_11515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY128_11520 PF14824 Sirohaem biosynthesis protein central FY128_11520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_11520 PF10414 Sirohaem synthase dimerisation region FY128_11525 PF01888 CbiD FY128_11530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_11540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_11545 PF02571 Precorrin-6x reductase CbiJ/CobK FY128_11550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_11555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_11560 PF02570 Precorrin-8X methylmutase FY128_11565 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY128_11570 PF02514 CobN/Magnesium Chelatase FY128_11575 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY128_11575 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY128_11585 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY128_11585 PF12557 Cob(I)alamin adenosyltransferase N terminal FY128_11590 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY128_11590 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY128_11595 PF03186 CobD/Cbib protein FY128_11600 PF00155 Aminotransferase class I and II FY128_11605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_11605 PF13378 Enolase C-terminal domain-like FY128_11610 PF05336 L-rhamnose mutarotase FY128_11615 PF01232 Mannitol dehydrogenase Rossmann domain FY128_11615 PF08125 Mannitol dehydrogenase C-terminal domain FY128_11620 PF08240 Alcohol dehydrogenase GroES-like domain FY128_11620 PF00107 Zinc-binding dehydrogenase FY128_11630 PF00248 Aldo/keto reductase family FY128_11640 PF02653 Branched-chain amino acid transport system / permease component FY128_11645 PF00005 ABC transporter FY128_11650 PF07729 FCD domain FY128_11650 PF00392 Bacterial regulatory proteins, gntR family FY128_11655 PF08666 SAF domain FY128_11655 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY128_11660 PF01808 AICARFT/IMPCHase bienzyme FY128_11660 PF02142 MGS-like domain FY128_11670 PF01189 16S rRNA methyltransferase RsmB/F FY128_11670 PF01029 NusB family FY128_11675 PF01435 Peptidase family M48 FY128_11685 PF17762 HTH domain found in ParB protein FY128_11685 PF02195 ParB-like nuclease domain FY128_11690 PF13614 AAA domain FY128_11695 PF02527 rRNA small subunit methyltransferase G FY128_11700 PF13932 GidA associated domain FY128_11700 PF01134 Glucose inhibited division protein A FY128_11705 PF01926 50S ribosome-binding GTPase FY128_11705 PF12631 MnmE helical domain FY128_11705 PF10396 GTP-binding protein TrmE N-terminus FY128_11710 PF07498 Rho termination factor, N-terminal domain FY128_11710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY128_11710 PF07497 Rho termination factor, RNA-binding domain FY128_11715 PF03653 Uncharacterised protein family (UPF0093) FY128_11720 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY128_11725 PF03618 Kinase/pyrophosphorylase FY128_11730 PF02545 Maf-like protein FY128_11735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY128_11735 PF01488 Shikimate / quinate 5-dehydrogenase FY128_11735 PF08501 Shikimate dehydrogenase substrate binding domain FY128_11740 PF01121 Dephospho-CoA kinase FY128_11745 PF00929 Exonuclease FY128_11750 PF02556 Preprotein translocase subunit SecB FY128_11755 PF04186 FxsA cytoplasmic membrane protein FY128_11765 PF06725 3D domain FY128_11765 PF03562 MltA specific insert domain FY128_11780 PF00204 DNA gyrase B FY128_11780 PF00986 DNA gyrase B subunit, carboxyl terminus FY128_11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_11780 PF01751 Toprim domain FY128_11790 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY128_11805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY128_11810 PF00291 Pyridoxal-phosphate dependent enzyme FY128_11815 PF00290 Tryptophan synthase alpha chain FY128_11820 PF01039 Carboxyl transferase domain FY128_11825 PF08245 Mur ligase middle domain FY128_11830 PF00085 Thioredoxin FY128_11835 PF12705 PD-(D/E)XK nuclease superfamily FY128_11835 PF13361 UvrD-like helicase C-terminal domain FY128_11835 PF00580 UvrD/REP helicase N-terminal domain FY128_11845 PF12804 MobA-like NTP transferase domain FY128_11850 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY128_11855 PF00512 His Kinase A (phospho-acceptor) domain FY128_11855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_11860 PF05221 S-adenosyl-L-homocysteine hydrolase FY128_11860 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY128_11865 PF00381 PTS HPr component phosphorylation site FY128_11870 PF03610 PTS system fructose IIA component FY128_11870 PF03830 PTS system sorbose subfamily IIB component FY128_11875 PF07475 HPr Serine kinase C-terminal domain FY128_11875 PF02603 HPr Serine kinase N terminus FY128_11880 PF00672 HAMP domain FY128_11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_11880 PF00512 His Kinase A (phospho-acceptor) domain FY128_11880 PF13755 Sensor N-terminal transmembrane domain FY128_11880 PF13756 Stimulus-sensing domain FY128_11885 PF00072 Response regulator receiver domain FY128_11885 PF00486 Transcriptional regulatory protein, C terminal FY128_11890 PF01293 Phosphoenolpyruvate carboxykinase FY128_11895 PF00472 RF-1 domain FY128_11900 PF04972 BON domain FY128_11900 PF01476 LysM domain FY128_11905 PF00485 Phosphoribulokinase / Uridine kinase family FY128_11910 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY128_11915 PF00977 Histidine biosynthesis protein FY128_11920 PF00977 Histidine biosynthesis protein FY128_11925 PF00117 Glutamine amidotransferase class-I FY128_11935 PF00475 Imidazoleglycerol-phosphate dehydratase FY128_11940 PF00227 Proteasome subunit FY128_11945 PF07724 AAA domain (Cdc48 subfamily) FY128_11945 PF00004 ATPase family associated with various cellular activities (AAA) FY128_11945 PF10431 C-terminal, D2-small domain, of ClpB protein FY128_11955 PF01274 Malate synthase FY128_11970 PF00072 Response regulator receiver domain FY128_11975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_11975 PF00512 His Kinase A (phospho-acceptor) domain FY128_11980 PF00270 DEAD/DEAH box helicase FY128_11980 PF04408 Helicase associated domain (HA2) FY128_11980 PF00271 Helicase conserved C-terminal domain FY128_11980 PF08482 ATP-dependent helicase C-terminal FY128_12015 PF16124 RecQ zinc-binding FY128_12015 PF00270 DEAD/DEAH box helicase FY128_12015 PF00271 Helicase conserved C-terminal domain FY128_12015 PF00570 HRDC domain FY128_12015 PF09382 RQC domain FY128_12020 PF00480 ROK family FY128_12025 PF13407 Periplasmic binding protein domain FY128_12030 PF02653 Branched-chain amino acid transport system / permease component FY128_12035 PF00005 ABC transporter FY128_12040 PF00485 Phosphoribulokinase / Uridine kinase family FY128_12045 PF00462 Glutaredoxin FY128_12050 PF07972 NrdI Flavodoxin like FY128_12055 PF02867 Ribonucleotide reductase, barrel domain FY128_12055 PF00317 Ribonucleotide reductase, all-alpha domain FY128_12055 PF08343 Ribonucleotide reductase N-terminal FY128_12060 PF00268 Ribonucleotide reductase, small chain FY128_12070 PF02463 RecF/RecN/SMC N terminal domain FY128_12075 PF00899 ThiF family FY128_12075 PF00581 Rhodanese-like domain FY128_12085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_12085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY128_12095 PF00294 pfkB family carbohydrate kinase FY128_12105 PF08468 Methyltransferase small domain N-terminal FY128_12105 PF05175 Methyltransferase small domain FY128_12110 PF00013 KH domain FY128_12110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY128_12110 PF01138 3' exoribonuclease family, domain 1 FY128_12110 PF00575 S1 RNA binding domain FY128_12110 PF03725 3' exoribonuclease family, domain 2 FY128_12115 PF00312 Ribosomal protein S15 FY128_12120 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY128_12120 PF09157 Pseudouridine synthase II TruB, C-terminal FY128_12120 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY128_12125 PF02033 Ribosome-binding factor A FY128_12130 PF08364 Bacterial translation initiation factor IF-2 associated region FY128_12130 PF00009 Elongation factor Tu GTP binding domain FY128_12130 PF04760 Translation initiation factor IF-2, N-terminal region FY128_12130 PF11987 Translation-initiation factor 2 FY128_12130 PF03144 Elongation factor Tu domain 2 FY128_12140 PF00575 S1 RNA binding domain FY128_12140 PF08529 NusA N-terminal domain FY128_12140 PF13184 NusA-like KH domain FY128_12145 PF02576 RimP N-terminal domain FY128_12145 PF17384 RimP C-terminal SH3 domain FY128_12150 PF05977 Transmembrane secretion effector FY128_12155 PF13406 Transglycosylase SLT domain FY128_12160 PF13662 Toprim domain FY128_12160 PF02132 RecR protein FY128_12170 PF02575 YbaB/EbfC DNA-binding family FY128_12175 PF12170 DNA polymerase III tau subunit V interacting with alpha FY128_12175 PF12169 DNA polymerase III subunits gamma and tau domain III FY128_12175 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY128_12190 PF00293 NUDIX domain FY128_12190 PF09297 NADH pyrophosphatase zinc ribbon domain FY128_12190 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY128_12195 PF00800 Prephenate dehydratase FY128_12195 PF01817 Chorismate mutase type II FY128_12200 PF02348 Cytidylyltransferase FY128_12205 PF00034 Cytochrome c FY128_12210 PF02397 Bacterial sugar transferase FY128_12215 PF00912 Transglycosylase FY128_12215 PF00905 Penicillin binding protein transpeptidase domain FY128_12220 PF04073 Aminoacyl-tRNA editing domain FY128_12225 PF00313 'Cold-shock' DNA-binding domain FY128_12230 PF01546 Peptidase family M20/M25/M40 FY128_12230 PF07687 Peptidase dimerisation domain FY128_12235 PF01047 MarR family FY128_12240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY128_12240 PF00476 DNA polymerase family A FY128_12240 PF01612 3'-5' exonuclease FY128_12240 PF01367 5'-3' exonuclease, C-terminal SAM fold FY128_12250 PF01783 Ribosomal L32p protein family FY128_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_12255 PF00512 His Kinase A (phospho-acceptor) domain FY128_12255 PF02743 Cache domain FY128_12260 PF02954 Bacterial regulatory protein, Fis family FY128_12260 PF00072 Response regulator receiver domain FY128_12260 PF00158 Sigma-54 interaction domain FY128_12265 PF03401 Tripartite tricarboxylate transporter family receptor FY128_12270 PF07331 Tripartite tricarboxylate transporter TctB family FY128_12275 PF01970 Tripartite tricarboxylate transporter TctA family FY128_12280 PF04102 SlyX FY128_12290 PF01556 DnaJ C terminal domain FY128_12290 PF00226 DnaJ domain FY128_12290 PF00684 DnaJ central domain FY128_12295 PF00012 Hsp70 protein FY128_12310 PF01625 Peptide methionine sulfoxide reductase FY128_12315 PF02608 ABC transporter substrate-binding protein PnrA-like FY128_12320 PF00005 ABC transporter FY128_12325 PF02653 Branched-chain amino acid transport system / permease component FY128_12330 PF02653 Branched-chain amino acid transport system / permease component FY128_12335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY128_12340 PF01048 Phosphorylase superfamily FY128_12345 PF01791 DeoC/LacD family aldolase FY128_12350 PF00591 Glycosyl transferase family, a/b domain FY128_12350 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY128_12350 PF02885 Glycosyl transferase family, helical bundle domain FY128_12365 PF00962 Adenosine/AMP deaminase FY128_12370 PF01676 Metalloenzyme superfamily FY128_12385 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY128_12390 PF00510 Cytochrome c oxidase subunit III FY128_12395 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY128_12400 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY128_12400 PF06481 COX Aromatic Rich Motif FY128_12405 PF00083 Sugar (and other) transporter FY128_12405 PF07690 Major Facilitator Superfamily FY128_12410 PF00310 Glutamine amidotransferases class-II FY128_12410 PF04898 Glutamate synthase central domain FY128_12410 PF01645 Conserved region in glutamate synthase FY128_12410 PF01493 GXGXG motif FY128_12415 PF00175 Oxidoreductase NAD-binding domain FY128_12415 PF00667 FAD binding domain FY128_12415 PF00258 Flavodoxin FY128_12435 PF00109 Beta-ketoacyl synthase, N-terminal domain FY128_12435 PF02801 Beta-ketoacyl synthase, C-terminal domain FY128_12440 PF07977 FabA-like domain FY128_12455 PF03458 UPF0126 domain FY128_12465 PF06912 Protein of unknown function (DUF1275) FY128_12475 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12480 PF00005 ABC transporter FY128_12485 PF00392 Bacterial regulatory proteins, gntR family FY128_12485 PF07702 UTRA domain FY128_12490 PF01618 MotA/TolQ/ExbB proton channel family FY128_12495 PF02472 Biopolymer transport protein ExbD/TolR FY128_12505 PF02615 Malate/L-lactate dehydrogenase FY128_12520 PF00625 Guanylate kinase FY128_12525 PF07969 Amidohydrolase family FY128_12530 PF06299 Protein of unknown function (DUF1045) FY128_12535 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12540 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12550 PF00005 ABC transporter FY128_12560 PF00005 ABC transporter FY128_12565 PF00005 ABC transporter FY128_12570 PF06007 Phosphonate metabolism protein PhnJ FY128_12575 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY128_12580 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY128_12585 PF06754 Phosphonate metabolism protein PhnG FY128_12590 PF07702 UTRA domain FY128_12590 PF00392 Bacterial regulatory proteins, gntR family FY128_12595 PF01113 Dihydrodipicolinate reductase, N-terminus FY128_12595 PF05173 Dihydrodipicolinate reductase, C-terminus FY128_12600 PF02685 Glucokinase FY128_12605 PF02142 MGS-like domain FY128_12610 PF03411 Penicillin-insensitive murein endopeptidase FY128_12615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_12620 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12625 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12625 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_12630 PF00005 ABC transporter FY128_12630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_12635 PF01266 FAD dependent oxidoreductase FY128_12640 PF00120 Glutamine synthetase, catalytic domain FY128_12645 PF01266 FAD dependent oxidoreductase FY128_12655 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12660 PF00005 ABC transporter FY128_12665 PF00528 Binding-protein-dependent transport system inner membrane component FY128_12670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY128_12680 PF02082 Transcriptional regulator FY128_12685 PF13416 Bacterial extracellular solute-binding protein FY128_12690 PF00171 Aldehyde dehydrogenase family FY128_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_12700 PF03466 LysR substrate binding domain FY128_12705 PF00892 EamA-like transporter family FY128_12720 PF00877 NlpC/P60 family FY128_12730 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY128_12730 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY128_12735 PF00883 Cytosol aminopeptidase family, catalytic domain FY128_12735 PF02789 Cytosol aminopeptidase family, N-terminal domain FY128_12755 PF00437 Type II/IV secretion system protein FY128_12770 PF13629 Pilus formation protein N terminal region FY128_12770 PF04972 BON domain FY128_12770 PF00263 Bacterial type II and III secretion system protein FY128_12810 PF00117 Glutamine amidotransferase class-I FY128_12815 PF07411 Domain of unknown function (DUF1508) FY128_12820 PF01183 Glycosyl hydrolases family 25 FY128_12825 PF00892 EamA-like transporter family FY128_12830 PF00392 Bacterial regulatory proteins, gntR family FY128_12830 PF00155 Aminotransferase class I and II FY128_12860 PF00009 Elongation factor Tu GTP binding domain FY128_12860 PF06421 GTP-binding protein LepA C-terminus FY128_12860 PF03144 Elongation factor Tu domain 2 FY128_12860 PF00679 Elongation factor G C-terminus FY128_12865 PF00795 Carbon-nitrogen hydrolase FY128_12895 PF12833 Helix-turn-helix domain FY128_12900 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_12925 PF05198 Translation initiation factor IF-3, N-terminal domain FY128_12925 PF00707 Translation initiation factor IF-3, C-terminal domain FY128_12930 PF01632 Ribosomal protein L35 FY128_12935 PF00453 Ribosomal protein L20 FY128_12945 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY128_12945 PF01409 tRNA synthetases class II core domain (F) FY128_12950 PF01588 Putative tRNA binding domain FY128_12950 PF03147 Ferredoxin-fold anticodon binding domain FY128_12950 PF03484 tRNA synthetase B5 domain FY128_12950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY128_12950 PF03483 B3/4 domain FY128_12955 PF00248 Aldo/keto reductase family FY128_12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_12960 PF03466 LysR substrate binding domain FY128_12970 PF00248 Aldo/keto reductase family FY128_12975 PF01965 DJ-1/PfpI family FY128_12975 PF12833 Helix-turn-helix domain FY128_12985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_12985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_13000 PF13742 OB-fold nucleic acid binding domain FY128_13000 PF02601 Exonuclease VII, large subunit FY128_13005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_13005 PF13378 Enolase C-terminal domain-like FY128_13010 PF07729 FCD domain FY128_13010 PF00392 Bacterial regulatory proteins, gntR family FY128_13015 PF01047 MarR family FY128_13020 PF00892 EamA-like transporter family FY128_13025 PF02073 Thermophilic metalloprotease (M29) FY128_13030 PF04073 Aminoacyl-tRNA editing domain FY128_13035 PF03960 ArsC family FY128_13045 PF00117 Glutamine amidotransferase class-I FY128_13045 PF00958 GMP synthase C terminal domain FY128_13060 PF03073 TspO/MBR family FY128_13085 PF01189 16S rRNA methyltransferase RsmB/F FY128_13085 PF01029 NusB family FY128_13090 PF03330 Lytic transglycolase FY128_13100 PF08331 Domain of unknown function (DUF1730) FY128_13105 PF00043 Glutathione S-transferase, C-terminal domain FY128_13105 PF13417 Glutathione S-transferase, N-terminal domain FY128_13110 PF02673 Bacitracin resistance protein BacA FY128_13125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY128_13135 PF13649 Methyltransferase domain FY128_13140 PF00712 DNA polymerase III beta subunit, N-terminal domain FY128_13140 PF02768 DNA polymerase III beta subunit, C-terminal domain FY128_13140 PF02767 DNA polymerase III beta subunit, central domain FY128_13145 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_13150 PF02021 Uncharacterised protein family UPF0102 FY128_13155 PF12464 Maltose acetyltransferase FY128_13155 PF14602 Hexapeptide repeat of succinyl-transferase FY128_13160 PF13416 Bacterial extracellular solute-binding protein FY128_13165 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13170 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13175 PF00005 ABC transporter FY128_13185 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY128_13185 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY128_13190 PF01078 Magnesium chelatase, subunit ChlI FY128_13190 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY128_13195 PF00291 Pyridoxal-phosphate dependent enzyme FY128_13200 PF01810 LysE type translocator FY128_13205 PF00692 dUTPase FY128_13210 PF00009 Elongation factor Tu GTP binding domain FY128_13210 PF03144 Elongation factor Tu domain 2 FY128_13210 PF16658 Class II release factor RF3, C-terminal domain FY128_13215 PF04127 DNA / pantothenate metabolism flavoprotein FY128_13215 PF02441 Flavoprotein FY128_13230 PF03109 ABC1 family FY128_13235 PF01209 ubiE/COQ5 methyltransferase family FY128_13240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY128_13240 PF06827 Zinc finger found in FPG and IleRS FY128_13240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY128_13245 PF00378 Enoyl-CoA hydratase/isomerase FY128_13250 PF01649 Ribosomal protein S20 FY128_13265 PF13302 Acetyltransferase (GNAT) domain FY128_13280 PF02534 Type IV secretory system Conjugative DNA transfer FY128_13295 PF17841 BID domain of Bartonella effector protein (Bep) FY128_13295 PF01443 Viral (Superfamily 1) RNA helicase FY128_13295 PF03389 MobA/MobL family FY128_13310 PF13007 Transposase C of IS166 homeodomain FY128_13310 PF13817 IS66 C-terminal element FY128_13310 PF03050 Transposase IS66 family FY128_13310 PF13005 zinc-finger binding domain of transposase IS66 FY128_13320 PF01527 Transposase FY128_13325 PF04471 Restriction endonuclease FY128_13325 PF14338 Mrr N-terminal domain FY128_13340 PF01420 Type I restriction modification DNA specificity domain FY128_13345 PF02384 N-6 DNA Methylase FY128_13350 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FY128_13350 PF04851 Type III restriction enzyme, res subunit FY128_13350 PF08463 EcoEI R protein C-terminal FY128_13350 PF00271 Helicase conserved C-terminal domain FY128_13360 PF13538 UvrD-like helicase C-terminal domain FY128_13415 PF03193 RsgA GTPase FY128_13420 PF07690 Major Facilitator Superfamily FY128_13440 PF17991 Thioredoxin like C-terminal domain FY128_13440 PF02683 Cytochrome C biogenesis protein transmembrane region FY128_13440 PF00578 AhpC/TSA family FY128_13450 PF00561 alpha/beta hydrolase fold FY128_13455 PF00486 Transcriptional regulatory protein, C terminal FY128_13455 PF00072 Response regulator receiver domain FY128_13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_13460 PF00512 His Kinase A (phospho-acceptor) domain FY128_13460 PF00672 HAMP domain FY128_13475 PF02566 OsmC-like protein FY128_13485 PF04199 Putative cyclase FY128_13490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_13495 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_13495 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY128_13505 PF09339 IclR helix-turn-helix domain FY128_13505 PF01614 Bacterial transcriptional regulator FY128_13515 PF00501 AMP-binding enzyme FY128_13515 PF13193 AMP-binding enzyme C-terminal domain FY128_13540 PF01037 Lrp/AsnC ligand binding domain FY128_13545 PF02538 Hydantoinase B/oxoprolinase FY128_13550 PF01968 Hydantoinase/oxoprolinase FY128_13550 PF05378 Hydantoinase/oxoprolinase N-terminal region FY128_13570 PF05378 Hydantoinase/oxoprolinase N-terminal region FY128_13570 PF01968 Hydantoinase/oxoprolinase FY128_13575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_13580 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_13585 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13590 PF00005 ABC transporter FY128_13590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_13595 PF01266 FAD dependent oxidoreductase FY128_13600 PF10415 Fumarase C C-terminus FY128_13600 PF00206 Lyase FY128_13605 PF01266 FAD dependent oxidoreductase FY128_13610 PF00005 ABC transporter FY128_13615 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13620 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13625 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_13635 PF00300 Histidine phosphatase superfamily (branch 1) FY128_13635 PF00106 short chain dehydrogenase FY128_13640 PF01266 FAD dependent oxidoreductase FY128_13645 PF00392 Bacterial regulatory proteins, gntR family FY128_13645 PF07729 FCD domain FY128_13650 PF17912 MalK OB fold domain FY128_13650 PF00005 ABC transporter FY128_13655 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13660 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13665 PF01547 Bacterial extracellular solute-binding protein FY128_13670 PF07940 Heparinase II/III-like protein FY128_13670 PF16889 Heparinase II/III N-terminus FY128_13685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_13685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY128_13695 PF13378 Enolase C-terminal domain-like FY128_13695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_13705 PF00011 Hsp20/alpha crystallin family FY128_13715 PF00534 Glycosyl transferases group 1 FY128_13715 PF13439 Glycosyltransferase Family 4 FY128_13720 PF00534 Glycosyl transferases group 1 FY128_13720 PF13439 Glycosyltransferase Family 4 FY128_13740 PF00953 Glycosyl transferase family 4 FY128_13750 PF13439 Glycosyltransferase Family 4 FY128_13750 PF00534 Glycosyl transferases group 1 FY128_13770 PF01339 CheB methylesterase FY128_13770 PF01739 CheR methyltransferase, SAM binding domain FY128_13770 PF03705 CheR methyltransferase, all-alpha domain FY128_13770 PF08448 PAS fold FY128_13775 PF00196 Bacterial regulatory proteins, luxR family FY128_13775 PF00072 Response regulator receiver domain FY128_13780 PF00202 Aminotransferase class-III FY128_13785 PF01370 NAD dependent epimerase/dehydratase family FY128_13790 PF16221 winged helix-turn-helix FY128_13790 PF16254 Domain of unknown function (DUF4910) FY128_13790 PF09940 Domain of unknown function (DUF2172) FY128_13795 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY128_13800 PF08484 C-methyltransferase C-terminal domain FY128_13800 PF08421 Putative zinc binding domain FY128_13805 PF00483 Nucleotidyl transferase FY128_13810 PF02585 GlcNAc-PI de-N-acetylase FY128_13815 PF00072 Response regulator receiver domain FY128_13815 PF00196 Bacterial regulatory proteins, luxR family FY128_13835 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY128_13835 PF12708 Pectate lyase superfamily protein FY128_13835 PF13229 Right handed beta helix region FY128_13840 PF01370 NAD dependent epimerase/dehydratase family FY128_13845 PF16363 GDP-mannose 4,6 dehydratase FY128_13855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_13855 PF03466 LysR substrate binding domain FY128_13860 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY128_13865 PF07690 Major Facilitator Superfamily FY128_13880 PF06472 ABC transporter transmembrane region 2 FY128_13880 PF00005 ABC transporter FY128_13885 PF00990 Diguanylate cyclase, GGDEF domain FY128_13895 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY128_13895 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY128_13900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_13900 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY128_13905 PF00723 Glycosyl hydrolases family 15 FY128_13905 PF09137 Glucodextranase, domain N FY128_13910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_13910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_13915 PF04324 BFD-like [2Fe-2S] binding domain FY128_13915 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_13920 PF04324 BFD-like [2Fe-2S] binding domain FY128_13920 PF01266 FAD dependent oxidoreductase FY128_13925 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY128_13930 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY128_13935 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13940 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13945 PF08402 TOBE domain FY128_13945 PF00005 ABC transporter FY128_13960 PF00795 Carbon-nitrogen hydrolase FY128_13965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_13965 PF03466 LysR substrate binding domain FY128_13975 PF01266 FAD dependent oxidoreductase FY128_13980 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_13980 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13985 PF00528 Binding-protein-dependent transport system inner membrane component FY128_13990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_13995 PF01266 FAD dependent oxidoreductase FY128_14000 PF00106 short chain dehydrogenase FY128_14000 PF00300 Histidine phosphatase superfamily (branch 1) FY128_14010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_14010 PF00005 ABC transporter FY128_14020 PF01037 Lrp/AsnC ligand binding domain FY128_14025 PF01053 Cys/Met metabolism PLP-dependent enzyme FY128_14035 PF07690 Major Facilitator Superfamily FY128_14040 PF03466 LysR substrate binding domain FY128_14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_14060 PF03466 LysR substrate binding domain FY128_14070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_14075 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14080 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_14080 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14085 PF00005 ABC transporter FY128_14085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_14090 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FY128_14090 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY128_14090 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal FY128_14100 PF00313 'Cold-shock' DNA-binding domain FY128_14110 PF02954 Bacterial regulatory protein, Fis family FY128_14110 PF00072 Response regulator receiver domain FY128_14110 PF00158 Sigma-54 interaction domain FY128_14115 PF00072 Response regulator receiver domain FY128_14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_14120 PF00512 His Kinase A (phospho-acceptor) domain FY128_14120 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY128_14120 PF01627 Hpt domain FY128_14120 PF00989 PAS fold FY128_14120 PF00072 Response regulator receiver domain FY128_14125 PF00005 ABC transporter FY128_14125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_14135 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14135 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_14140 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_14150 PF00392 Bacterial regulatory proteins, gntR family FY128_14150 PF07729 FCD domain FY128_14155 PF00144 Beta-lactamase FY128_14160 PF03466 LysR substrate binding domain FY128_14160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_14190 PF04542 Sigma-70 region 2 FY128_14190 PF08281 Sigma-70, region 4 FY128_14195 PF01177 Asp/Glu/Hydantoin racemase FY128_14200 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14205 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14215 PF00005 ABC transporter FY128_14215 PF08402 TOBE domain FY128_14220 PF00005 ABC transporter FY128_14225 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14230 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14235 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_14240 PF07729 FCD domain FY128_14240 PF00392 Bacterial regulatory proteins, gntR family FY128_14250 PF00743 Flavin-binding monooxygenase-like FY128_14255 PF00107 Zinc-binding dehydrogenase FY128_14255 PF08240 Alcohol dehydrogenase GroES-like domain FY128_14260 PF00158 Sigma-54 interaction domain FY128_14260 PF02954 Bacterial regulatory protein, Fis family FY128_14260 PF01590 GAF domain FY128_14275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_14275 PF08447 PAS fold FY128_14275 PF13426 PAS domain FY128_14290 PF13416 Bacterial extracellular solute-binding protein FY128_14295 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14300 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14305 PF00005 ABC transporter FY128_14305 PF17912 MalK OB fold domain FY128_14310 PF00296 Luciferase-like monooxygenase FY128_14315 PF09084 NMT1/THI5 like FY128_14320 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14325 PF00005 ABC transporter FY128_14330 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14335 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14345 PF00005 ABC transporter FY128_14345 PF17912 MalK OB fold domain FY128_14350 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY128_14365 PF00356 Bacterial regulatory proteins, lacI family FY128_14375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_14375 PF01842 ACT domain FY128_14375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY128_14380 PF01261 Xylose isomerase-like TIM barrel FY128_14385 PF17912 MalK OB fold domain FY128_14385 PF03459 TOBE domain FY128_14385 PF00005 ABC transporter FY128_14390 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14395 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14400 PF13416 Bacterial extracellular solute-binding protein FY128_14405 PF17938 Tetracyclin repressor-like, C-terminal domain FY128_14405 PF00440 Bacterial regulatory proteins, tetR family FY128_14410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_14410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_14425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_14425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_14430 PF00313 'Cold-shock' DNA-binding domain FY128_14440 PF01165 Ribosomal protein S21 FY128_14470 PF00550 Phosphopantetheine attachment site FY128_14475 PF02687 FtsX-like permease family FY128_14475 PF12704 MacB-like periplasmic core domain FY128_14475 PF00005 ABC transporter FY128_14480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY128_14495 PF00072 Response regulator receiver domain FY128_14495 PF00486 Transcriptional regulatory protein, C terminal FY128_14500 PF00672 HAMP domain FY128_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_14500 PF00512 His Kinase A (phospho-acceptor) domain FY128_14505 PF07470 Glycosyl Hydrolase Family 88 FY128_14510 PF00295 Glycosyl hydrolases family 28 FY128_14520 PF00005 ABC transporter FY128_14520 PF08402 TOBE domain FY128_14525 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14530 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14535 PF02311 AraC-like ligand binding domain FY128_14535 PF12833 Helix-turn-helix domain FY128_14540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_14550 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_14555 PF04909 Amidohydrolase FY128_14560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_14560 PF13378 Enolase C-terminal domain-like FY128_14565 PF00701 Dihydrodipicolinate synthetase family FY128_14575 PF04962 KduI/IolB family FY128_14580 PF01370 NAD dependent epimerase/dehydratase family FY128_14585 PF00392 Bacterial regulatory proteins, gntR family FY128_14585 PF07729 FCD domain FY128_14600 PF00248 Aldo/keto reductase family FY128_14605 PF00005 ABC transporter FY128_14605 PF17912 MalK OB fold domain FY128_14610 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14615 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14630 PF02311 AraC-like ligand binding domain FY128_14630 PF12833 Helix-turn-helix domain FY128_14635 PF07690 Major Facilitator Superfamily FY128_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_14640 PF03466 LysR substrate binding domain FY128_14645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_14655 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_14660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_14660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY128_14675 PF00356 Bacterial regulatory proteins, lacI family FY128_14680 PF16912 Glucose dehydrogenase C-terminus FY128_14680 PF08240 Alcohol dehydrogenase GroES-like domain FY128_14695 PF00294 pfkB family carbohydrate kinase FY128_14700 PF08013 Tagatose 6 phosphate kinase FY128_14705 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14710 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14715 PF08402 TOBE domain FY128_14715 PF00005 ABC transporter FY128_14720 PF00005 ABC transporter FY128_14720 PF17912 MalK OB fold domain FY128_14725 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14730 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14735 PF01547 Bacterial extracellular solute-binding protein FY128_14740 PF01053 Cys/Met metabolism PLP-dependent enzyme FY128_14750 PF01297 Zinc-uptake complex component A periplasmic FY128_14755 PF00950 ABC 3 transport family FY128_14760 PF00005 ABC transporter FY128_14765 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY128_14765 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY128_14780 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY128_14780 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY128_14785 PF13416 Bacterial extracellular solute-binding protein FY128_14790 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14795 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14800 PF00005 ABC transporter FY128_14800 PF08402 TOBE domain FY128_14810 PF03922 OmpW family FY128_14830 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY128_14830 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY128_14835 PF03466 LysR substrate binding domain FY128_14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_14840 PF13407 Periplasmic binding protein domain FY128_14845 PF02653 Branched-chain amino acid transport system / permease component FY128_14850 PF00005 ABC transporter FY128_14855 PF00563 EAL domain FY128_14855 PF00990 Diguanylate cyclase, GGDEF domain FY128_14855 PF08447 PAS fold FY128_14855 PF08448 PAS fold FY128_14855 PF13426 PAS domain FY128_14855 PF05231 MASE1 FY128_14860 PF05899 Protein of unknown function (DUF861) FY128_14860 PF07883 Cupin domain FY128_14870 PF00563 EAL domain FY128_14870 PF08448 PAS fold FY128_14870 PF08447 PAS fold FY128_14870 PF00990 Diguanylate cyclase, GGDEF domain FY128_14875 PF02615 Malate/L-lactate dehydrogenase FY128_14880 PF09397 Ftsk gamma domain FY128_14880 PF17854 FtsK alpha domain FY128_14880 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY128_14880 PF01580 FtsK/SpoIIIE family FY128_14885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_14890 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14895 PF00528 Binding-protein-dependent transport system inner membrane component FY128_14895 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_14900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_14900 PF00005 ABC transporter FY128_14905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_14905 PF00005 ABC transporter FY128_14910 PF00266 Aminotransferase class-V FY128_14920 PF00920 Dehydratase family FY128_14925 PF13407 Periplasmic binding protein domain FY128_14930 PF00005 ABC transporter FY128_14935 PF02653 Branched-chain amino acid transport system / permease component FY128_14940 PF02653 Branched-chain amino acid transport system / permease component FY128_14945 PF00392 Bacterial regulatory proteins, gntR family FY128_14945 PF07729 FCD domain FY128_14950 PF07690 Major Facilitator Superfamily FY128_14960 PF14579 Helix-hairpin-helix motif FY128_14960 PF02811 PHP domain FY128_14960 PF01336 OB-fold nucleic acid binding domain FY128_14960 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY128_14960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY128_14985 PF13660 Domain of unknown function (DUF4147) FY128_14985 PF05161 MOFRL family FY128_14995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_14995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_15005 PF00005 ABC transporter FY128_15005 PF17912 MalK OB fold domain FY128_15005 PF03459 TOBE domain FY128_15010 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15015 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15020 PF01547 Bacterial extracellular solute-binding protein FY128_15025 PF00480 ROK family FY128_15025 PF01047 MarR family FY128_15030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_15040 PF01425 Amidase FY128_15045 PF08447 PAS fold FY128_15045 PF00990 Diguanylate cyclase, GGDEF domain FY128_15045 PF00563 EAL domain FY128_15045 PF08448 PAS fold FY128_15060 PF03776 Septum formation topological specificity factor MinE FY128_15065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY128_15070 PF03775 Septum formation inhibitor MinC, C-terminal domain FY128_15070 PF05209 Septum formation inhibitor MinC, N-terminal domain FY128_15075 PF13419 Haloacid dehalogenase-like hydrolase FY128_15080 PF00392 Bacterial regulatory proteins, gntR family FY128_15080 PF07729 FCD domain FY128_15085 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_15095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_15100 PF08240 Alcohol dehydrogenase GroES-like domain FY128_15100 PF00107 Zinc-binding dehydrogenase FY128_15105 PF03786 D-mannonate dehydratase (UxuA) FY128_15115 PF00171 Aldehyde dehydrogenase family FY128_15120 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_15125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_15125 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY128_15130 PF00296 Luciferase-like monooxygenase FY128_15145 PF00043 Glutathione S-transferase, C-terminal domain FY128_15145 PF02798 Glutathione S-transferase, N-terminal domain FY128_15150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_15150 PF00005 ABC transporter FY128_15155 PF03841 L-seryl-tRNA selenium transferase FY128_15170 PF01979 Amidohydrolase family FY128_15175 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15175 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_15180 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_15195 PF13439 Glycosyltransferase Family 4 FY128_15195 PF00534 Glycosyl transferases group 1 FY128_15205 PF02563 Polysaccharide biosynthesis/export protein FY128_15210 PF13533 Biotin-lipoyl like FY128_15215 PF00873 AcrB/AcrD/AcrF family FY128_15225 PF12951 Passenger-associated-transport-repeat FY128_15230 PF01613 Flavin reductase like domain FY128_15235 PF00248 Aldo/keto reductase family FY128_15240 PF00296 Luciferase-like monooxygenase FY128_15245 PF07702 UTRA domain FY128_15245 PF00392 Bacterial regulatory proteins, gntR family FY128_15250 PF00005 ABC transporter FY128_15250 PF08402 TOBE domain FY128_15255 PF01547 Bacterial extracellular solute-binding protein FY128_15260 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15265 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15270 PF01055 Glycosyl hydrolases family 31 FY128_15280 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15285 PF09084 NMT1/THI5 like FY128_15290 PF02110 Hydroxyethylthiazole kinase family FY128_15295 PF02581 Thiamine monophosphate synthase FY128_15300 PF08543 Phosphomethylpyrimidine kinase FY128_15305 PF01037 Lrp/AsnC ligand binding domain FY128_15310 PF00842 Alanine racemase, C-terminal domain FY128_15310 PF01168 Alanine racemase, N-terminal domain FY128_15315 PF01266 FAD dependent oxidoreductase FY128_15330 PF00158 Sigma-54 interaction domain FY128_15330 PF02954 Bacterial regulatory protein, Fis family FY128_15330 PF00072 Response regulator receiver domain FY128_15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_15335 PF00512 His Kinase A (phospho-acceptor) domain FY128_15340 PF00375 Sodium:dicarboxylate symporter family FY128_15345 PF00892 EamA-like transporter family FY128_15350 PF00202 Aminotransferase class-III FY128_15365 PF01546 Peptidase family M20/M25/M40 FY128_15365 PF07687 Peptidase dimerisation domain FY128_15375 PF01270 Glycosyl hydrolases family 8 FY128_15385 PF03552 Cellulose synthase FY128_15385 PF07238 PilZ domain FY128_15385 PF00535 Glycosyl transferase family 2 FY128_15415 PF16363 GDP-mannose 4,6 dehydratase FY128_15420 PF16363 GDP-mannose 4,6 dehydratase FY128_15430 PF00196 Bacterial regulatory proteins, luxR family FY128_15445 PF00005 ABC transporter FY128_15445 PF00664 ABC transporter transmembrane region FY128_15450 PF00529 HlyD membrane-fusion protein of T1SS FY128_15465 PF02563 Polysaccharide biosynthesis/export protein FY128_15470 PF02397 Bacterial sugar transferase FY128_15485 PF00202 Aminotransferase class-III FY128_15490 PF00672 HAMP domain FY128_15490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_15495 PF03734 L,D-transpeptidase catalytic domain FY128_15495 PF17969 L,D-transpeptidase C-terminal domain FY128_15515 PF02245 Methylpurine-DNA glycosylase (MPG) FY128_15525 PF00356 Bacterial regulatory proteins, lacI family FY128_15530 PF01547 Bacterial extracellular solute-binding protein FY128_15535 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15540 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15545 PF00005 ABC transporter FY128_15545 PF17912 MalK OB fold domain FY128_15545 PF03459 TOBE domain FY128_15555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_15555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_15560 PF04055 Radical SAM superfamily FY128_15565 PF01242 6-pyruvoyl tetrahydropterin synthase FY128_15570 PF06508 Queuosine biosynthesis protein QueC FY128_15575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_15575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_15585 PF00005 ABC transporter FY128_15585 PF17912 MalK OB fold domain FY128_15590 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15595 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15600 PF01547 Bacterial extracellular solute-binding protein FY128_15610 PF01050 Mannose-6-phosphate isomerase FY128_15610 PF00483 Nucleotidyl transferase FY128_15615 PF01011 PQQ enzyme repeat FY128_15620 PF03466 LysR substrate binding domain FY128_15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_15625 PF01515 Phosphate acetyl/butaryl transferase FY128_15625 PF00390 Malic enzyme, N-terminal domain FY128_15625 PF03949 Malic enzyme, NAD binding domain FY128_15630 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_15635 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15640 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15645 PF00005 ABC transporter FY128_15650 PF03972 MmgE/PrpD family FY128_15655 PF00296 Luciferase-like monooxygenase FY128_15660 PF13426 PAS domain FY128_15660 PF08447 PAS fold FY128_15660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_15665 PF01266 FAD dependent oxidoreductase FY128_15685 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY128_15690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_15695 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_15700 PF07722 Peptidase C26 FY128_15705 PF02653 Branched-chain amino acid transport system / permease component FY128_15710 PF00005 ABC transporter FY128_15715 PF13407 Periplasmic binding protein domain FY128_15720 PF01546 Peptidase family M20/M25/M40 FY128_15725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_15735 PF00005 ABC transporter FY128_15735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_15740 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_15740 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15745 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15750 PF03466 LysR substrate binding domain FY128_15750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_15755 PF01112 Asparaginase FY128_15770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_15785 PF00005 ABC transporter FY128_15785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_15790 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15790 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_15795 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15800 PF00196 Bacterial regulatory proteins, luxR family FY128_15800 PF00072 Response regulator receiver domain FY128_15805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY128_15805 PF00529 HlyD membrane-fusion protein of T1SS FY128_15810 PF00664 ABC transporter transmembrane region FY128_15810 PF00005 ABC transporter FY128_15830 PF04542 Sigma-70 region 2 FY128_15830 PF08281 Sigma-70, region 4 FY128_15830 PF12680 SnoaL-like domain FY128_15835 PF00005 ABC transporter FY128_15840 PF01032 FecCD transport family FY128_15855 PF01209 ubiE/COQ5 methyltransferase family FY128_15860 PF00127 Copper binding proteins, plastocyanin/azurin family FY128_15865 PF00005 ABC transporter FY128_15870 PF01032 FecCD transport family FY128_15885 PF01546 Peptidase family M20/M25/M40 FY128_15885 PF07687 Peptidase dimerisation domain FY128_15890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_15900 PF00171 Aldehyde dehydrogenase family FY128_15905 PF00180 Isocitrate/isopropylmalate dehydrogenase FY128_15910 PF00171 Aldehyde dehydrogenase family FY128_15915 PF01266 FAD dependent oxidoreductase FY128_15930 PF00202 Aminotransferase class-III FY128_15940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_15945 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15950 PF00528 Binding-protein-dependent transport system inner membrane component FY128_15950 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_15955 PF00005 ABC transporter FY128_15955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_15960 PF01037 Lrp/AsnC ligand binding domain FY128_15965 PF01266 FAD dependent oxidoreductase FY128_15975 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_15980 PF00005 ABC transporter FY128_15990 PF01546 Peptidase family M20/M25/M40 FY128_15990 PF07687 Peptidase dimerisation domain FY128_15995 PF00296 Luciferase-like monooxygenase FY128_16000 PF00296 Luciferase-like monooxygenase FY128_16005 PF02082 Transcriptional regulator FY128_16015 PF01613 Flavin reductase like domain FY128_16020 PF00296 Luciferase-like monooxygenase FY128_16035 PF00296 Luciferase-like monooxygenase FY128_16040 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_16040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY128_16040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_16050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_16055 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16060 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16065 PF00005 ABC transporter FY128_16065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_16070 PF00005 ABC transporter FY128_16070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_16075 PF00248 Aldo/keto reductase family FY128_16085 PF03466 LysR substrate binding domain FY128_16085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_16090 PF00296 Luciferase-like monooxygenase FY128_16105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_16110 PF07687 Peptidase dimerisation domain FY128_16110 PF01546 Peptidase family M20/M25/M40 FY128_16115 PF00296 Luciferase-like monooxygenase FY128_16120 PF05368 NmrA-like family FY128_16130 PF00296 Luciferase-like monooxygenase FY128_16135 PF00296 Luciferase-like monooxygenase FY128_16140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_16140 PF13378 Enolase C-terminal domain-like FY128_16150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_16155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_16155 PF00005 ABC transporter FY128_16160 PF00005 ABC transporter FY128_16160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_16165 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_16165 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16170 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16180 PF07729 FCD domain FY128_16180 PF00392 Bacterial regulatory proteins, gntR family FY128_16190 PF00561 alpha/beta hydrolase fold FY128_16195 PF00106 short chain dehydrogenase FY128_16205 PF00753 Metallo-beta-lactamase superfamily FY128_16205 PF04273 Putative phosphatase (DUF442) FY128_16215 PF04143 Sulphur transport FY128_16225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY128_16225 PF01676 Metalloenzyme superfamily FY128_16230 PF00364 Biotin-requiring enzyme FY128_16230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY128_16230 PF02817 e3 binding domain FY128_16235 PF02780 Transketolase, C-terminal domain FY128_16235 PF02779 Transketolase, pyrimidine binding domain FY128_16240 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY128_16240 PF00676 Dehydrogenase E1 component FY128_16245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_16245 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_16245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY128_16250 PF00108 Thiolase, N-terminal domain FY128_16250 PF02803 Thiolase, C-terminal domain FY128_16255 PF01037 Lrp/AsnC ligand binding domain FY128_16260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY128_16260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_16260 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_16265 PF01039 Carboxyl transferase domain FY128_16270 PF02785 Biotin carboxylase C-terminal domain FY128_16270 PF00289 Biotin carboxylase, N-terminal domain FY128_16270 PF00364 Biotin-requiring enzyme FY128_16270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_16275 PF00682 HMGL-like FY128_16280 PF00378 Enoyl-CoA hydratase/isomerase FY128_16285 PF02569 Pantoate-beta-alanine ligase FY128_16290 PF02548 Ketopantoate hydroxymethyltransferase FY128_16295 PF01261 Xylose isomerase-like TIM barrel FY128_16300 PF00596 Class II Aldolase and Adducin N-terminal domain FY128_16305 PF08220 DeoR-like helix-turn-helix domain FY128_16305 PF00455 DeoR C terminal sensor domain FY128_16310 PF13407 Periplasmic binding protein domain FY128_16315 PF00005 ABC transporter FY128_16320 PF02653 Branched-chain amino acid transport system / permease component FY128_16325 PF02653 Branched-chain amino acid transport system / permease component FY128_16330 PF05336 L-rhamnose mutarotase FY128_16340 PF00561 alpha/beta hydrolase fold FY128_16350 PF00563 EAL domain FY128_16350 PF00990 Diguanylate cyclase, GGDEF domain FY128_16350 PF08447 PAS fold FY128_16350 PF08448 PAS fold FY128_16360 PF00171 Aldehyde dehydrogenase family FY128_16365 PF08713 DNA alkylation repair enzyme FY128_16370 PF00005 ABC transporter FY128_16375 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16380 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16390 PF00378 Enoyl-CoA hydratase/isomerase FY128_16410 PF08241 Methyltransferase domain FY128_16420 PF00795 Carbon-nitrogen hydrolase FY128_16425 PF00462 Glutaredoxin FY128_16435 PF08241 Methyltransferase domain FY128_16450 PF00293 NUDIX domain FY128_16455 PF00583 Acetyltransferase (GNAT) family FY128_16455 PF13508 Acetyltransferase (GNAT) domain FY128_16460 PF01960 ArgJ family FY128_16470 PF07516 SecA Wing and Scaffold domain FY128_16470 PF07517 SecA DEAD-like domain FY128_16470 PF01043 SecA preprotein cross-linking domain FY128_16470 PF02810 SEC-C motif FY128_16480 PF01757 Acyltransferase family FY128_16540 PF01943 Polysaccharide biosynthesis protein FY128_16555 PF01757 Acyltransferase family FY128_16565 PF13614 AAA domain FY128_16585 PF00534 Glycosyl transferases group 1 FY128_16585 PF13439 Glycosyltransferase Family 4 FY128_16590 PF13439 Glycosyltransferase Family 4 FY128_16590 PF00534 Glycosyl transferases group 1 FY128_16605 PF01272 Transcription elongation factor, GreA/GreB, C-term FY128_16605 PF03449 Transcription elongation factor, N-terminal FY128_16610 PF00722 Glycosyl hydrolases family 16 FY128_16610 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY128_16620 PF03009 Glycerophosphoryl diester phosphodiesterase family FY128_16625 PF00005 ABC transporter FY128_16625 PF17912 MalK OB fold domain FY128_16630 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16635 PF00528 Binding-protein-dependent transport system inner membrane component FY128_16645 PF00480 ROK family FY128_16645 PF01047 MarR family FY128_16670 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY128_16685 PF01381 Helix-turn-helix FY128_16695 PF00005 ABC transporter FY128_16700 PF02653 Branched-chain amino acid transport system / permease component FY128_16705 PF13407 Periplasmic binding protein domain FY128_16715 PF01266 FAD dependent oxidoreductase FY128_16715 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY128_16725 PF01642 Methylmalonyl-CoA mutase FY128_16725 PF02310 B12 binding domain FY128_16730 PF02785 Biotin carboxylase C-terminal domain FY128_16730 PF00289 Biotin carboxylase, N-terminal domain FY128_16730 PF18140 Propionyl-coenzyme A carboxylase BT domain FY128_16730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_16730 PF00364 Biotin-requiring enzyme FY128_16740 PF02798 Glutathione S-transferase, N-terminal domain FY128_16745 PF01039 Carboxyl transferase domain FY128_16750 PF01381 Helix-turn-helix FY128_16750 PF06114 IrrE N-terminal-like domain FY128_16750 PF09856 Predicted transcriptional regulator (DUF2083) FY128_16755 PF12833 Helix-turn-helix domain FY128_16755 PF02805 Metal binding domain of Ada FY128_16755 PF06029 AlkA N-terminal domain FY128_16755 PF00730 HhH-GPD superfamily base excision DNA repair protein FY128_16760 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY128_16770 PF00106 short chain dehydrogenase FY128_16780 PF01923 Cobalamin adenosyltransferase FY128_16790 PF01012 Electron transfer flavoprotein domain FY128_16795 PF01012 Electron transfer flavoprotein domain FY128_16795 PF00766 Electron transfer flavoprotein FAD-binding domain FY128_16800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY128_16800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY128_16805 PF08534 Redoxin FY128_16810 PF00206 Lyase FY128_16810 PF14698 Argininosuccinate lyase C-terminal FY128_16820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY128_16820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY128_16830 PF00072 Response regulator receiver domain FY128_16835 PF00156 Phosphoribosyl transferase domain FY128_16845 PF00005 ABC transporter FY128_16865 PF04752 ChaC-like protein FY128_16880 PF02153 Prephenate dehydrogenase FY128_16885 PF00155 Aminotransferase class I and II FY128_16890 PF01209 ubiE/COQ5 methyltransferase family FY128_16895 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY128_16895 PF00753 Metallo-beta-lactamase superfamily FY128_16910 PF00830 Ribosomal L28 family FY128_16915 PF02592 Putative vitamin uptake transporter FY128_16930 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY128_16930 PF06213 Cobalamin biosynthesis protein CobT FY128_16935 PF07728 AAA domain (dynein-related subfamily) FY128_16935 PF08406 CbbQ/NirQ/NorQ C-terminal FY128_16935 PF12556 Cobaltochelatase CobS subunit N terminal FY128_16940 PF00226 DnaJ domain FY128_16945 PF01722 BolA-like protein FY128_16950 PF01761 3-dehydroquinate synthase FY128_16955 PF01202 Shikimate kinase FY128_16965 PF00589 Phage integrase family FY128_16965 PF02899 Phage integrase, N-terminal SAM-like domain FY128_16970 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY128_16975 PF03734 L,D-transpeptidase catalytic domain FY128_16980 PF01206 Sulfurtransferase TusA FY128_16985 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY128_16985 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY128_16990 PF07943 Penicillin-binding protein 5, C-terminal domain FY128_16990 PF00768 D-alanyl-D-alanine carboxypeptidase FY128_16995 PF01546 Peptidase family M20/M25/M40 FY128_16995 PF07687 Peptidase dimerisation domain FY128_17005 PF06832 Penicillin-Binding Protein C-terminus Family FY128_17005 PF00912 Transglycosylase FY128_17005 PF00905 Penicillin binding protein transpeptidase domain FY128_17010 PF07678 A-macroglobulin TED domain FY128_17010 PF01835 MG2 domain FY128_17010 PF17962 Bacterial macroglobulin domain 6 FY128_17010 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY128_17010 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY128_17010 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY128_17010 PF07703 Alpha-2-macroglobulin bait region domain FY128_17010 PF00207 Alpha-2-macroglobulin family FY128_17010 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY128_17015 PF03966 Trm112p-like protein FY128_17025 PF00085 Thioredoxin FY128_17080 PF09039 Mu DNA binding, I gamma subdomain FY128_17080 PF02914 Bacteriophage Mu transposase FY128_17080 PF02316 Mu DNA-binding domain FY128_17080 PF09299 Mu transposase, C-terminal FY128_17180 PF03237 Terminase-like family FY128_17185 PF06074 Protein of unknown function (DUF935) FY128_17210 PF10124 Mu-like prophage major head subunit gpT FY128_17220 PF07030 Protein of unknown function (DUF1320) FY128_17275 PF04865 Baseplate J-like protein FY128_17325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY128_17325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_17325 PF01842 ACT domain FY128_17335 PF13505 Outer membrane protein beta-barrel domain FY128_17340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY128_17340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY128_17340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY128_17340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY128_17345 PF00004 ATPase family associated with various cellular activities (AAA) FY128_17345 PF17862 AAA+ lid domain FY128_17345 PF06480 FtsH Extracellular FY128_17345 PF01434 Peptidase family M41 FY128_17350 PF01171 PP-loop family FY128_17360 PF00691 OmpA family FY128_17365 PF07676 WD40-like Beta Propeller Repeat FY128_17365 PF04052 TolB amino-terminal domain FY128_17375 PF02472 Biopolymer transport protein ExbD/TolR FY128_17380 PF01618 MotA/TolQ/ExbB proton channel family FY128_17385 PF03061 Thioesterase superfamily FY128_17395 PF00293 NUDIX domain FY128_17410 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY128_17410 PF05491 RuvB C-terminal winged helix domain FY128_17410 PF17864 RuvB AAA lid domain FY128_17415 PF01330 RuvA N terminal domain FY128_17415 PF07499 RuvA, C-terminal domain FY128_17420 PF02075 Crossover junction endodeoxyribonuclease RuvC FY128_17425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_17425 PF00672 HAMP domain FY128_17430 PF00296 Luciferase-like monooxygenase FY128_17435 PF01709 Transcriptional regulator FY128_17450 PF13277 YmdB-like protein FY128_17460 PF01595 Cyclin M transmembrane N-terminal domain FY128_17460 PF03471 Transporter associated domain FY128_17460 PF00571 CBS domain FY128_17480 PF00456 Transketolase, thiamine diphosphate binding domain FY128_17480 PF02779 Transketolase, pyrimidine binding domain FY128_17480 PF02780 Transketolase, C-terminal domain FY128_17485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY128_17485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY128_17495 PF00999 Sodium/hydrogen exchanger family FY128_17495 PF03471 Transporter associated domain FY128_17500 PF00162 Phosphoglycerate kinase FY128_17505 PF00274 Fructose-bisphosphate aldolase class-I FY128_17525 PF01197 Ribosomal protein L31 FY128_17530 PF00005 ABC transporter FY128_17530 PF00664 ABC transporter transmembrane region FY128_17535 PF00890 FAD binding domain FY128_17540 PF01389 OmpA-like transmembrane domain FY128_17540 PF00691 OmpA family FY128_17550 PF00459 Inositol monophosphatase family FY128_17580 PF00731 AIR carboxylase FY128_17585 PF02222 ATP-grasp domain FY128_17585 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY128_17590 PF00444 Ribosomal protein L36 FY128_17600 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY128_17620 PF00224 Pyruvate kinase, barrel domain FY128_17620 PF02887 Pyruvate kinase, alpha/beta domain FY128_17625 PF05951 Bacterial protein of unknown function (DUF882) FY128_17630 PF02954 Bacterial regulatory protein, Fis family FY128_17630 PF00072 Response regulator receiver domain FY128_17630 PF00158 Sigma-54 interaction domain FY128_17635 PF08439 Oligopeptidase F FY128_17635 PF01432 Peptidase family M3 FY128_17640 PF01063 Amino-transferase class IV FY128_17645 PF00990 Diguanylate cyclase, GGDEF domain FY128_17650 PF03435 Saccharopine dehydrogenase NADP binding domain FY128_17650 PF16653 Saccharopine dehydrogenase C-terminal domain FY128_17660 PF02872 5'-nucleotidase, C-terminal domain FY128_17660 PF00149 Calcineurin-like phosphoesterase FY128_17665 PF00762 Ferrochelatase FY128_17670 PF01145 SPFH domain / Band 7 family FY128_17670 PF16200 C-terminal region of band_7 FY128_17680 PF00571 CBS domain FY128_17680 PF01380 SIS domain FY128_17695 PF00483 Nucleotidyl transferase FY128_17700 PF13406 Transglycosylase SLT domain FY128_17710 PF00072 Response regulator receiver domain FY128_17710 PF00486 Transcriptional regulatory protein, C terminal FY128_17715 PF00512 His Kinase A (phospho-acceptor) domain FY128_17715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_17715 PF00672 HAMP domain FY128_17720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY128_17720 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_17730 PF01493 GXGXG motif FY128_17730 PF01645 Conserved region in glutamate synthase FY128_17730 PF04898 Glutamate synthase central domain FY128_17730 PF00310 Glutamine amidotransferases class-II FY128_17735 PF01212 Beta-eliminating lyase FY128_17740 PF00486 Transcriptional regulatory protein, C terminal FY128_17740 PF00072 Response regulator receiver domain FY128_17745 PF00512 His Kinase A (phospho-acceptor) domain FY128_17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_17745 PF13493 Domain of unknown function (DUF4118) FY128_17745 PF02702 Osmosensitive K+ channel His kinase sensor domain FY128_17745 PF13492 GAF domain FY128_17750 PF02669 K+-transporting ATPase, c chain FY128_17760 PF03814 Potassium-transporting ATPase A subunit FY128_17770 PF00710 Asparaginase, N-terminal FY128_17770 PF17763 Glutaminase/Asparaginase C-terminal domain FY128_17775 PF00324 Amino acid permease FY128_17780 PF00206 Lyase FY128_17780 PF10415 Fumarase C C-terminus FY128_17785 PF07729 FCD domain FY128_17785 PF00392 Bacterial regulatory proteins, gntR family FY128_17790 PF00873 AcrB/AcrD/AcrF family FY128_17800 PF13533 Biotin-lipoyl like FY128_17805 PF13977 BetI-type transcriptional repressor, C-terminal FY128_17805 PF00440 Bacterial regulatory proteins, tetR family FY128_17810 PF00487 Fatty acid desaturase FY128_17830 PF03466 LysR substrate binding domain FY128_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_17845 PF00171 Aldehyde dehydrogenase family FY128_17850 PF08402 TOBE domain FY128_17850 PF00005 ABC transporter FY128_17855 PF00528 Binding-protein-dependent transport system inner membrane component FY128_17860 PF00528 Binding-protein-dependent transport system inner membrane component FY128_17875 PF00171 Aldehyde dehydrogenase family FY128_17880 PF00296 Luciferase-like monooxygenase FY128_17885 PF01613 Flavin reductase like domain FY128_17890 PF12697 Alpha/beta hydrolase family FY128_17900 PF00465 Iron-containing alcohol dehydrogenase FY128_17905 PF00005 ABC transporter FY128_17910 PF00528 Binding-protein-dependent transport system inner membrane component FY128_17920 PF07729 FCD domain FY128_17920 PF00392 Bacterial regulatory proteins, gntR family FY128_17925 PF00551 Formyl transferase FY128_17930 PF00120 Glutamine synthetase, catalytic domain FY128_17935 PF01645 Conserved region in glutamate synthase FY128_17940 PF01493 GXGXG motif FY128_17965 PF00701 Dihydrodipicolinate synthetase family FY128_17970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_17970 PF00005 ABC transporter FY128_17975 PF00528 Binding-protein-dependent transport system inner membrane component FY128_17975 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_17980 PF00528 Binding-protein-dependent transport system inner membrane component FY128_17985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_17995 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY128_18000 PF00465 Iron-containing alcohol dehydrogenase FY128_18005 PF07729 FCD domain FY128_18005 PF00392 Bacterial regulatory proteins, gntR family FY128_18020 PF03061 Thioesterase superfamily FY128_18045 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY128_18045 PF14403 Circularly permuted ATP-grasp type 2 FY128_18050 PF08379 Bacterial transglutaminase-like N-terminal region FY128_18050 PF01841 Transglutaminase-like superfamily FY128_18060 PF12848 ABC transporter FY128_18060 PF00005 ABC transporter FY128_18065 PF01070 FMN-dependent dehydrogenase FY128_18070 PF01047 MarR family FY128_18075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_18075 PF00672 HAMP domain FY128_18080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_18080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_18085 PF01791 DeoC/LacD family aldolase FY128_18090 PF01266 FAD dependent oxidoreductase FY128_18090 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY128_18095 PF00248 Aldo/keto reductase family FY128_18105 PF02653 Branched-chain amino acid transport system / permease component FY128_18110 PF00005 ABC transporter FY128_18115 PF13407 Periplasmic binding protein domain FY128_18125 PF00072 Response regulator receiver domain FY128_18135 PF00459 Inositol monophosphatase family FY128_18145 PF00011 Hsp20/alpha crystallin family FY128_18150 PF13593 SBF-like CPA transporter family (DUF4137) FY128_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_18155 PF03466 LysR substrate binding domain FY128_18160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_18160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_18175 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18180 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18185 PF17912 MalK OB fold domain FY128_18185 PF00005 ABC transporter FY128_18190 PF00005 ABC transporter FY128_18190 PF08402 TOBE domain FY128_18195 PF01266 FAD dependent oxidoreductase FY128_18195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY128_18200 PF00455 DeoR C terminal sensor domain FY128_18200 PF08220 DeoR-like helix-turn-helix domain FY128_18205 PF14824 Sirohaem biosynthesis protein central FY128_18205 PF10414 Sirohaem synthase dimerisation region FY128_18205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY128_18210 PF01568 Molydopterin dinucleotide binding domain FY128_18210 PF00384 Molybdopterin oxidoreductase FY128_18210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY128_18210 PF04324 BFD-like [2Fe-2S] binding domain FY128_18220 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY128_18220 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_18220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY128_18220 PF04324 BFD-like [2Fe-2S] binding domain FY128_18220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY128_18225 PF00005 ABC transporter FY128_18230 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18245 PF03861 ANTAR domain FY128_18245 PF08376 Nitrate and nitrite sensing FY128_18250 PF07729 FCD domain FY128_18250 PF00392 Bacterial regulatory proteins, gntR family FY128_18255 PF01566 Natural resistance-associated macrophage protein FY128_18260 PF03746 LamB/YcsF family FY128_18265 PF07286 Protein of unknown function (DUF1445) FY128_18270 PF02682 Carboxyltransferase domain, subdomain C and D FY128_18275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_18275 PF00289 Biotin carboxylase, N-terminal domain FY128_18275 PF02785 Biotin carboxylase C-terminal domain FY128_18275 PF00364 Biotin-requiring enzyme FY128_18280 PF00128 Alpha amylase, catalytic domain FY128_18280 PF02806 Alpha amylase, C-terminal all-beta domain FY128_18285 PF00376 MerR family regulatory protein FY128_18285 PF09278 MerR, DNA binding FY128_18290 PF07715 TonB-dependent Receptor Plug Domain FY128_18290 PF00593 TonB dependent receptor FY128_18295 PF00591 Glycosyl transferase family, a/b domain FY128_18295 PF02885 Glycosyl transferase family, helical bundle domain FY128_18300 PF06772 Bacterial low temperature requirement A protein (LtrA) FY128_18315 PF03428 Replication protein C N-terminal domain FY128_18315 PF11800 Replication protein C C-terminal region FY128_18320 PF02195 ParB-like nuclease domain FY128_18320 PF07506 RepB plasmid partitioning protein FY128_18325 PF13614 AAA domain FY128_18335 PF01042 Endoribonuclease L-PSP FY128_18340 PF14031 Putative serine dehydratase domain FY128_18340 PF01168 Alanine racemase, N-terminal domain FY128_18345 PF07364 Metallopeptidase family M81 FY128_18345 PF07171 MlrC C-terminus FY128_18350 PF05962 HutD FY128_18355 PF12697 Alpha/beta hydrolase family FY128_18360 PF01175 Urocanase Rossmann-like domain FY128_18360 PF17391 Urocanase N-terminal domain FY128_18360 PF17392 Urocanase C-terminal domain FY128_18370 PF00221 Aromatic amino acid lyase FY128_18375 PF01979 Amidohydrolase family FY128_18380 PF01979 Amidohydrolase family FY128_18385 PF00392 Bacterial regulatory proteins, gntR family FY128_18385 PF07702 UTRA domain FY128_18420 PF00364 Biotin-requiring enzyme FY128_18425 PF02785 Biotin carboxylase C-terminal domain FY128_18425 PF00289 Biotin carboxylase, N-terminal domain FY128_18425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY128_18440 PF02626 Carboxyltransferase domain, subdomain A and B FY128_18445 PF03746 LamB/YcsF family FY128_18450 PF00155 Aminotransferase class I and II FY128_18455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_18455 PF03466 LysR substrate binding domain FY128_18460 PF00106 short chain dehydrogenase FY128_18465 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18470 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18475 PF00005 ABC transporter FY128_18480 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_18485 PF03737 Aldolase/RraA FY128_18490 PF00491 Arginase family FY128_18495 PF00005 ABC transporter FY128_18500 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18505 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18510 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_18515 PF03466 LysR substrate binding domain FY128_18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_18530 PF03358 NADPH-dependent FMN reductase FY128_18535 PF03960 ArsC family FY128_18540 PF01758 Sodium Bile acid symporter family FY128_18550 PF03737 Aldolase/RraA FY128_18555 PF01370 NAD dependent epimerase/dehydratase family FY128_18560 PF00920 Dehydratase family FY128_18565 PF00005 ABC transporter FY128_18565 PF17912 MalK OB fold domain FY128_18570 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18575 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_18585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_18590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_18590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_18595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_18595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_18600 PF00392 Bacterial regulatory proteins, gntR family FY128_18600 PF07729 FCD domain FY128_18610 PF00293 NUDIX domain FY128_18615 PF02567 Phenazine biosynthesis-like protein FY128_18625 PF01494 FAD binding domain FY128_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_18630 PF03466 LysR substrate binding domain FY128_18635 PF07690 Major Facilitator Superfamily FY128_18640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY128_18645 PF00296 Luciferase-like monooxygenase FY128_18655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_18655 PF00005 ABC transporter FY128_18660 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18665 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_18675 PF00384 Molybdopterin oxidoreductase FY128_18675 PF01568 Molydopterin dinucleotide binding domain FY128_18680 PF02913 FAD linked oxidases, C-terminal domain FY128_18680 PF01565 FAD binding domain FY128_18685 PF01323 DSBA-like thioredoxin domain FY128_18700 PF00672 HAMP domain FY128_18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_18700 PF00512 His Kinase A (phospho-acceptor) domain FY128_18705 PF00072 Response regulator receiver domain FY128_18705 PF00486 Transcriptional regulatory protein, C terminal FY128_18710 PF01569 PAP2 superfamily FY128_18755 PF13673 Acetyltransferase (GNAT) domain FY128_18760 PF04055 Radical SAM superfamily FY128_18760 PF06968 Biotin and Thiamin Synthesis associated domain FY128_18765 PF00155 Aminotransferase class I and II FY128_18775 PF00202 Aminotransferase class-III FY128_18780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY128_18780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY128_18795 PF00491 Arginase family FY128_18800 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY128_18805 PF00892 EamA-like transporter family FY128_18810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_18810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_18820 PF00211 Adenylate and Guanylate cyclase catalytic domain FY128_18830 PF11972 HTH DNA binding domain FY128_18830 PF07756 Protein of unknown function (DUF1612) FY128_18835 PF00083 Sugar (and other) transporter FY128_18840 PF00512 His Kinase A (phospho-acceptor) domain FY128_18840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_18845 PF00486 Transcriptional regulatory protein, C terminal FY128_18845 PF00072 Response regulator receiver domain FY128_18850 PF08019 Phosphoethanolamine transferase EptA/EptB FY128_18850 PF00884 Sulfatase FY128_18860 PF03466 LysR substrate binding domain FY128_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_18865 PF00593 TonB dependent receptor FY128_18865 PF07715 TonB-dependent Receptor Plug Domain FY128_18875 PF01032 FecCD transport family FY128_18880 PF00005 ABC transporter FY128_18895 PF02631 RecX family FY128_18900 PF08450 SMP-30/Gluconolactonase/LRE-like region FY128_18910 PF02653 Branched-chain amino acid transport system / permease component FY128_18915 PF00005 ABC transporter FY128_18920 PF13407 Periplasmic binding protein domain FY128_18925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_18925 PF07730 Histidine kinase FY128_18930 PF00072 Response regulator receiver domain FY128_18930 PF00196 Bacterial regulatory proteins, luxR family FY128_18940 PF07995 Glucose / Sorbosone dehydrogenase FY128_18950 PF04445 Putative SAM-dependent methyltransferase FY128_18955 PF00849 RNA pseudouridylate synthase FY128_18960 PF01205 Uncharacterized protein family UPF0029 FY128_18965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY128_18965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_18970 PF00005 ABC transporter FY128_18970 PF00571 CBS domain FY128_18975 PF00528 Binding-protein-dependent transport system inner membrane component FY128_18985 PF13426 PAS domain FY128_18985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_18985 PF00072 Response regulator receiver domain FY128_18990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_18995 PF02706 Chain length determinant protein FY128_18995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY128_18995 PF13807 G-rich domain on putative tyrosine kinase FY128_19000 PF00483 Nucleotidyl transferase FY128_19005 PF00535 Glycosyl transferase family 2 FY128_19010 PF00535 Glycosyl transferase family 2 FY128_19015 PF00535 Glycosyl transferase family 2 FY128_19025 PF00722 Glycosyl hydrolases family 16 FY128_19030 PF01757 Acyltransferase family FY128_19035 PF01943 Polysaccharide biosynthesis protein FY128_19040 PF00535 Glycosyl transferase family 2 FY128_19045 PF04230 Polysaccharide pyruvyl transferase FY128_19050 PF00535 Glycosyl transferase family 2 FY128_19055 PF11089 Exopolysaccharide production repressor FY128_19070 PF01165 Ribosomal protein S21 FY128_19075 PF01266 FAD dependent oxidoreductase FY128_19090 PF17806 Sarcosine oxidase A3 domain FY128_19090 PF01571 Aminomethyltransferase folate-binding domain FY128_19090 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_19090 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY128_19110 PF01575 MaoC like domain FY128_19115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY128_19115 PF18390 Glycogen debranching enzyme C-terminal domain FY128_19115 PF00128 Alpha amylase, catalytic domain FY128_19120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY128_19120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY128_19120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY128_19120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY128_19125 PF08323 Starch synthase catalytic domain FY128_19125 PF00534 Glycosyl transferases group 1 FY128_19130 PF00483 Nucleotidyl transferase FY128_19135 PF00128 Alpha amylase, catalytic domain FY128_19135 PF02806 Alpha amylase, C-terminal all-beta domain FY128_19135 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY128_19140 PF00343 Carbohydrate phosphorylase FY128_19155 PF01177 Asp/Glu/Hydantoin racemase FY128_19160 PF01037 Lrp/AsnC ligand binding domain FY128_19170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_19170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY128_19180 PF08240 Alcohol dehydrogenase GroES-like domain FY128_19180 PF00107 Zinc-binding dehydrogenase FY128_19190 PF00005 ABC transporter FY128_19190 PF00664 ABC transporter transmembrane region FY128_19195 PF00005 ABC transporter FY128_19195 PF00664 ABC transporter transmembrane region FY128_19200 PF01654 Cytochrome bd terminal oxidase subunit I FY128_19205 PF02322 Cytochrome bd terminal oxidase subunit II FY128_19210 PF08173 Membrane bound YbgT-like protein FY128_19230 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY128_19230 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY128_19235 PF02910 Fumarate reductase flavoprotein C-term FY128_19235 PF00890 FAD binding domain FY128_19240 PF02445 Quinolinate synthetase A protein FY128_19270 PF02224 Cytidylate kinase FY128_19275 PF00575 S1 RNA binding domain FY128_19305 PF00106 short chain dehydrogenase FY128_19310 PF01321 Creatinase/Prolidase N-terminal domain FY128_19310 PF00557 Metallopeptidase family M24 FY128_19315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_19320 PF00528 Binding-protein-dependent transport system inner membrane component FY128_19325 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_19325 PF00528 Binding-protein-dependent transport system inner membrane component FY128_19330 PF00005 ABC transporter FY128_19330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_19335 PF00005 ABC transporter FY128_19335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_19340 PF07729 FCD domain FY128_19340 PF00392 Bacterial regulatory proteins, gntR family FY128_19345 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_19345 PF13378 Enolase C-terminal domain-like FY128_19350 PF00296 Luciferase-like monooxygenase FY128_19365 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY128_19365 PF00005 ABC transporter FY128_19370 PF00005 ABC transporter FY128_19375 PF02653 Branched-chain amino acid transport system / permease component FY128_19380 PF11862 Domain of unknown function (DUF3382) FY128_19380 PF02653 Branched-chain amino acid transport system / permease component FY128_19385 PF05199 GMC oxidoreductase FY128_19385 PF00732 GMC oxidoreductase FY128_19390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_19390 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY128_19395 PF00501 AMP-binding enzyme FY128_19395 PF13193 AMP-binding enzyme C-terminal domain FY128_19420 PF01011 PQQ enzyme repeat FY128_19425 PF05974 Domain of unknown function (DUF892) FY128_19435 PF01965 DJ-1/PfpI family FY128_19460 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY128_19460 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY128_19465 PF16363 GDP-mannose 4,6 dehydratase FY128_19470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY128_19470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY128_19470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY128_19480 PF13409 Glutathione S-transferase, N-terminal domain FY128_19485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_19485 PF03466 LysR substrate binding domain FY128_19490 PF00171 Aldehyde dehydrogenase family FY128_19495 PF09084 NMT1/THI5 like FY128_19500 PF00528 Binding-protein-dependent transport system inner membrane component FY128_19505 PF00005 ABC transporter FY128_19510 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY128_19510 PF14850 DNA-binding domain of Proline dehydrogenase FY128_19510 PF01619 Proline dehydrogenase FY128_19510 PF00171 Aldehyde dehydrogenase family FY128_19515 PF01037 Lrp/AsnC ligand binding domain FY128_19520 PF08281 Sigma-70, region 4 FY128_19520 PF04542 Sigma-70 region 2 FY128_19530 PF00072 Response regulator receiver domain FY128_19535 PF07536 HWE histidine kinase FY128_19535 PF13426 PAS domain FY128_19535 PF08447 PAS fold FY128_19540 PF13426 PAS domain FY128_19540 PF07536 HWE histidine kinase FY128_19550 PF16363 GDP-mannose 4,6 dehydratase FY128_19570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY128_19575 PF16653 Saccharopine dehydrogenase C-terminal domain FY128_19575 PF03435 Saccharopine dehydrogenase NADP binding domain FY128_19580 PF00270 DEAD/DEAH box helicase FY128_19580 PF00271 Helicase conserved C-terminal domain FY128_19585 PF01842 ACT domain FY128_19585 PF00696 Amino acid kinase family FY128_19585 PF13840 ACT domain FY128_19590 PF01590 GAF domain FY128_19590 PF05524 PEP-utilising enzyme, N-terminal FY128_19590 PF00391 PEP-utilising enzyme, mobile domain FY128_19590 PF02896 PEP-utilising enzyme, TIM barrel domain FY128_19595 PF03462 PCRF domain FY128_19595 PF00472 RF-1 domain FY128_19600 PF17827 PrmC N-terminal domain FY128_19600 PF05175 Methyltransferase small domain FY128_19610 PF10431 C-terminal, D2-small domain, of ClpB protein FY128_19610 PF17871 AAA lid domain FY128_19610 PF07724 AAA domain (Cdc48 subfamily) FY128_19610 PF00004 ATPase family associated with various cellular activities (AAA) FY128_19610 PF02861 Clp amino terminal domain, pathogenicity island component FY128_19615 PF10145 Phage-related minor tail protein FY128_19615 PF01551 Peptidase family M23 FY128_19615 PF01464 Transglycosylase SLT domain FY128_19655 PF12327 FtsZ family, C-terminal domain FY128_19655 PF00091 Tubulin/FtsZ family, GTPase domain FY128_19660 PF02801 Beta-ketoacyl synthase, C-terminal domain FY128_19660 PF00109 Beta-ketoacyl synthase, N-terminal domain FY128_19675 PF00873 AcrB/AcrD/AcrF family FY128_19680 PF00440 Bacterial regulatory proteins, tetR family FY128_19685 PF00106 short chain dehydrogenase FY128_19690 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY128_19695 PF00106 short chain dehydrogenase FY128_19700 PF00107 Zinc-binding dehydrogenase FY128_19700 PF08240 Alcohol dehydrogenase GroES-like domain FY128_19710 PF00384 Molybdopterin oxidoreductase FY128_19715 PF07690 Major Facilitator Superfamily FY128_19720 PF01494 FAD binding domain FY128_19725 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_19735 PF00196 Bacterial regulatory proteins, luxR family FY128_19735 PF00072 Response regulator receiver domain FY128_19740 PF00196 Bacterial regulatory proteins, luxR family FY128_19740 PF00072 Response regulator receiver domain FY128_19745 PF00072 Response regulator receiver domain FY128_19745 PF08448 PAS fold FY128_19745 PF00512 His Kinase A (phospho-acceptor) domain FY128_19745 PF13426 PAS domain FY128_19745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_19750 PF00190 Cupin FY128_19755 PF00210 Ferritin-like domain FY128_19760 PF00561 alpha/beta hydrolase fold FY128_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_19765 PF03466 LysR substrate binding domain FY128_19780 PF01047 MarR family FY128_19790 PF00561 alpha/beta hydrolase fold FY128_19795 PF04752 ChaC-like protein FY128_19800 PF03466 LysR substrate binding domain FY128_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_19805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_19810 PF03466 LysR substrate binding domain FY128_19810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_19825 PF07969 Amidohydrolase family FY128_19850 PF00111 2Fe-2S iron-sulfur cluster binding domain FY128_19850 PF01799 [2Fe-2S] binding domain FY128_19850 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY128_19855 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY128_19855 PF00941 FAD binding domain in molybdopterin dehydrogenase FY128_19860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY128_19860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY128_19865 PF13478 XdhC Rossmann domain FY128_19865 PF02625 XdhC and CoxI family FY128_19870 PF00132 Bacterial transferase hexapeptide (six repeats) FY128_19870 PF12804 MobA-like NTP transferase domain FY128_19880 PF01965 DJ-1/PfpI family FY128_19885 PF03707 Bacterial signalling protein N terminal repeat FY128_19885 PF00990 Diguanylate cyclase, GGDEF domain FY128_19885 PF00563 EAL domain FY128_19890 PF00313 'Cold-shock' DNA-binding domain FY128_19895 PF00571 CBS domain FY128_19895 PF00005 ABC transporter FY128_19900 PF00528 Binding-protein-dependent transport system inner membrane component FY128_19915 PF07702 UTRA domain FY128_19915 PF00392 Bacterial regulatory proteins, gntR family FY128_19920 PF00221 Aromatic amino acid lyase FY128_19940 PF00005 ABC transporter FY128_19940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_19945 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_19945 PF00528 Binding-protein-dependent transport system inner membrane component FY128_19950 PF00528 Binding-protein-dependent transport system inner membrane component FY128_19955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_19960 PF00672 HAMP domain FY128_19960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_19960 PF02203 Tar ligand binding domain homologue FY128_19970 PF00563 EAL domain FY128_19970 PF00990 Diguanylate cyclase, GGDEF domain FY128_19970 PF03707 Bacterial signalling protein N terminal repeat FY128_19970 PF13188 PAS domain FY128_19990 PF00356 Bacterial regulatory proteins, lacI family FY128_20000 PF00005 ABC transporter FY128_20005 PF02653 Branched-chain amino acid transport system / permease component FY128_20010 PF02126 Phosphotriesterase family FY128_20020 PF00294 pfkB family carbohydrate kinase FY128_20030 PF01546 Peptidase family M20/M25/M40 FY128_20030 PF07687 Peptidase dimerisation domain FY128_20035 PF02469 Fasciclin domain FY128_20040 PF06434 Aconitate hydratase 2 N-terminus FY128_20040 PF00330 Aconitase family (aconitate hydratase) FY128_20040 PF11791 Aconitate B N-terminal domain FY128_20050 PF00733 Asparagine synthase FY128_20050 PF13537 Glutamine amidotransferase domain FY128_20060 PF13193 AMP-binding enzyme C-terminal domain FY128_20060 PF00501 AMP-binding enzyme FY128_20065 PF02540 NAD synthase FY128_20085 PF17806 Sarcosine oxidase A3 domain FY128_20085 PF01571 Aminomethyltransferase folate-binding domain FY128_20085 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY128_20085 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_20090 PF04267 Sarcosine oxidase, delta subunit family FY128_20095 PF01266 FAD dependent oxidoreductase FY128_20100 PF12833 Helix-turn-helix domain FY128_20100 PF01965 DJ-1/PfpI family FY128_20105 PF00005 ABC transporter FY128_20110 PF02653 Branched-chain amino acid transport system / permease component FY128_20115 PF02653 Branched-chain amino acid transport system / permease component FY128_20125 PF07729 FCD domain FY128_20125 PF00392 Bacterial regulatory proteins, gntR family FY128_20135 PF01232 Mannitol dehydrogenase Rossmann domain FY128_20135 PF08125 Mannitol dehydrogenase C-terminal domain FY128_20140 PF03786 D-mannonate dehydratase (UxuA) FY128_20145 PF00248 Aldo/keto reductase family FY128_20160 PF00440 Bacterial regulatory proteins, tetR family FY128_20165 PF00107 Zinc-binding dehydrogenase FY128_20165 PF08240 Alcohol dehydrogenase GroES-like domain FY128_20170 PF12833 Helix-turn-helix domain FY128_20175 PF13407 Periplasmic binding protein domain FY128_20180 PF00005 ABC transporter FY128_20185 PF02653 Branched-chain amino acid transport system / permease component FY128_20190 PF00106 short chain dehydrogenase FY128_20195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_20195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_20205 PF08946 Osmosensory transporter coiled coil FY128_20205 PF00083 Sugar (and other) transporter FY128_20215 PF00459 Inositol monophosphatase family FY128_20230 PF02690 Na+/Pi-cotransporter FY128_20235 PF00356 Bacterial regulatory proteins, lacI family FY128_20240 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20245 PF08402 TOBE domain FY128_20245 PF00005 ABC transporter FY128_20265 PF00459 Inositol monophosphatase family FY128_20275 PF03741 Integral membrane protein TerC family FY128_20275 PF03471 Transporter associated domain FY128_20290 PF03459 TOBE domain FY128_20290 PF00005 ABC transporter FY128_20290 PF17912 MalK OB fold domain FY128_20295 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20300 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20305 PF13416 Bacterial extracellular solute-binding protein FY128_20310 PF01261 Xylose isomerase-like TIM barrel FY128_20315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_20315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_20320 PF00356 Bacterial regulatory proteins, lacI family FY128_20335 PF01266 FAD dependent oxidoreductase FY128_20345 PF17806 Sarcosine oxidase A3 domain FY128_20345 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_20345 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY128_20345 PF01571 Aminomethyltransferase folate-binding domain FY128_20355 PF00464 Serine hydroxymethyltransferase FY128_20360 PF00551 Formyl transferase FY128_20365 PF00924 Mechanosensitive ion channel FY128_20375 PF01740 STAS domain FY128_20375 PF00916 Sulfate permease family FY128_20390 PF01648 4'-phosphopantetheinyl transferase superfamily FY128_20390 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY128_20400 PF00857 Isochorismatase family FY128_20400 PF00550 Phosphopantetheine attachment site FY128_20405 PF00501 AMP-binding enzyme FY128_20405 PF13193 AMP-binding enzyme C-terminal domain FY128_20410 PF00425 chorismate binding enzyme FY128_20420 PF00501 AMP-binding enzyme FY128_20420 PF00668 Condensation domain FY128_20420 PF00550 Phosphopantetheine attachment site FY128_20420 PF00975 Thioesterase domain FY128_20425 PF00668 Condensation domain FY128_20425 PF00550 Phosphopantetheine attachment site FY128_20425 PF13193 AMP-binding enzyme C-terminal domain FY128_20425 PF00501 AMP-binding enzyme FY128_20425 PF00975 Thioesterase domain FY128_20435 PF08021 Siderophore-interacting FAD-binding domain FY128_20435 PF04954 Siderophore-interacting protein FY128_20445 PF01032 FecCD transport family FY128_20450 PF01032 FecCD transport family FY128_20455 PF00005 ABC transporter FY128_20460 PF00296 Luciferase-like monooxygenase FY128_20470 PF07715 TonB-dependent Receptor Plug Domain FY128_20475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY128_20475 PF02770 Acyl-CoA dehydrogenase, middle domain FY128_20475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY128_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_20480 PF03466 LysR substrate binding domain FY128_20485 PF00356 Bacterial regulatory proteins, lacI family FY128_20495 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20505 PF00005 ABC transporter FY128_20505 PF08402 TOBE domain FY128_20515 PF13382 Adenine deaminase C-terminal domain FY128_20515 PF01979 Amidohydrolase family FY128_20520 PF03466 LysR substrate binding domain FY128_20520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_20525 PF07690 Major Facilitator Superfamily FY128_20530 PF07687 Peptidase dimerisation domain FY128_20530 PF01546 Peptidase family M20/M25/M40 FY128_20535 PF00156 Phosphoribosyl transferase domain FY128_20540 PF01244 Membrane dipeptidase (Peptidase family M19) FY128_20545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_20550 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_20555 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_20560 PF00005 ABC transporter FY128_20565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_20565 PF00005 ABC transporter FY128_20570 PF03466 LysR substrate binding domain FY128_20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_20575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_20580 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20585 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_20590 PF01425 Amidase FY128_20595 PF01965 DJ-1/PfpI family FY128_20605 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20605 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_20610 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_20620 PF01546 Peptidase family M20/M25/M40 FY128_20620 PF07687 Peptidase dimerisation domain FY128_20625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_20625 PF00005 ABC transporter FY128_20630 PF04198 Putative sugar-binding domain FY128_20640 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20645 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20650 PF08402 TOBE domain FY128_20650 PF00005 ABC transporter FY128_20655 PF01232 Mannitol dehydrogenase Rossmann domain FY128_20655 PF08125 Mannitol dehydrogenase C-terminal domain FY128_20660 PF13419 Haloacid dehalogenase-like hydrolase FY128_20665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_20665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_20670 PF01418 Helix-turn-helix domain, rpiR family FY128_20670 PF01380 SIS domain FY128_20680 PF10576 Iron-sulfur binding domain of endonuclease III FY128_20680 PF00730 HhH-GPD superfamily base excision DNA repair protein FY128_20680 PF00633 Helix-hairpin-helix motif FY128_20690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY128_20690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY128_20695 PF13936 Helix-turn-helix domain FY128_20695 PF04198 Putative sugar-binding domain FY128_20700 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY128_20705 PF09339 IclR helix-turn-helix domain FY128_20705 PF01614 Bacterial transcriptional regulator FY128_20715 PF07043 Protein of unknown function (DUF1328) FY128_20720 PF00950 ABC 3 transport family FY128_20725 PF00950 ABC 3 transport family FY128_20730 PF00005 ABC transporter FY128_20735 PF01297 Zinc-uptake complex component A periplasmic FY128_20745 PF01734 Patatin-like phospholipase FY128_20750 PF01336 OB-fold nucleic acid binding domain FY128_20750 PF00152 tRNA synthetases class II (D, K and N) FY128_20755 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY128_20760 PF02080 TrkA-C domain FY128_20760 PF03600 Citrate transporter FY128_20765 PF03471 Transporter associated domain FY128_20765 PF03741 Integral membrane protein TerC family FY128_20770 PF00440 Bacterial regulatory proteins, tetR family FY128_20775 PF13533 Biotin-lipoyl like FY128_20780 PF07690 Major Facilitator Superfamily FY128_20785 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY128_20785 PF00356 Bacterial regulatory proteins, lacI family FY128_20790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_20790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_20795 PF01261 Xylose isomerase-like TIM barrel FY128_20800 PF00232 Glycosyl hydrolase family 1 FY128_20805 PF00881 Nitroreductase family FY128_20810 PF00005 ABC transporter FY128_20810 PF09383 NIL domain FY128_20815 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20820 PF03180 NLPA lipoprotein FY128_20825 PF13188 PAS domain FY128_20825 PF00990 Diguanylate cyclase, GGDEF domain FY128_20825 PF00563 EAL domain FY128_20825 PF03707 Bacterial signalling protein N terminal repeat FY128_20830 PF00581 Rhodanese-like domain FY128_20830 PF17773 UPF0176 acylphosphatase like domain FY128_20840 PF01928 CYTH domain FY128_20845 PF01081 KDPG and KHG aldolase FY128_20865 PF03824 High-affinity nickel-transport protein FY128_20885 PF13505 Outer membrane protein beta-barrel domain FY128_20900 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY128_20900 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY128_20905 PF02633 Creatinine amidohydrolase FY128_20910 PF01047 MarR family FY128_20915 PF00356 Bacterial regulatory proteins, lacI family FY128_20920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY128_20920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_20925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_20925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_20930 PF04962 KduI/IolB family FY128_20935 PF01261 Xylose isomerase-like TIM barrel FY128_20940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY128_20940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY128_20940 PF00205 Thiamine pyrophosphate enzyme, central domain FY128_20945 PF00294 pfkB family carbohydrate kinase FY128_20955 PF00005 ABC transporter FY128_20960 PF00005 ABC transporter FY128_20960 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY128_20975 PF13458 Periplasmic binding protein FY128_20990 PF00528 Binding-protein-dependent transport system inner membrane component FY128_20990 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_20995 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_21005 PF00005 ABC transporter FY128_21005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_21015 PF01261 Xylose isomerase-like TIM barrel FY128_21015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY128_21025 PF01220 Dehydroquinase class II FY128_21030 PF08501 Shikimate dehydrogenase substrate binding domain FY128_21030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY128_21035 PF00005 ABC transporter FY128_21040 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_21045 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_21050 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21055 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21060 PF00206 Lyase FY128_21060 PF10397 Adenylosuccinate lyase C-terminus FY128_21065 PF00775 Dioxygenase FY128_21070 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY128_21070 PF00775 Dioxygenase FY128_21075 PF02627 Carboxymuconolactone decarboxylase family FY128_21085 PF03466 LysR substrate binding domain FY128_21085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_21090 PF01494 FAD binding domain FY128_21100 PF09339 IclR helix-turn-helix domain FY128_21100 PF01614 Bacterial transcriptional regulator FY128_21105 PF01144 Coenzyme A transferase FY128_21110 PF01144 Coenzyme A transferase FY128_21115 PF02803 Thiolase, C-terminal domain FY128_21115 PF00108 Thiolase, N-terminal domain FY128_21120 PF00356 Bacterial regulatory proteins, lacI family FY128_21125 PF13407 Periplasmic binding protein domain FY128_21130 PF01261 Xylose isomerase-like TIM barrel FY128_21135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_21135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_21145 PF00356 Bacterial regulatory proteins, lacI family FY128_21150 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21155 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21160 PF17912 MalK OB fold domain FY128_21160 PF00005 ABC transporter FY128_21170 PF07470 Glycosyl Hydrolase Family 88 FY128_21185 PF12951 Passenger-associated-transport-repeat FY128_21190 PF00480 ROK family FY128_21200 PF17912 MalK OB fold domain FY128_21200 PF00005 ABC transporter FY128_21205 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21210 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21215 PF03009 Glycerophosphoryl diester phosphodiesterase family FY128_21220 PF00459 Inositol monophosphatase family FY128_21225 PF00480 ROK family FY128_21230 PF01547 Bacterial extracellular solute-binding protein FY128_21235 PF08402 TOBE domain FY128_21235 PF00005 ABC transporter FY128_21240 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21255 PF00037 4Fe-4S binding domain FY128_21255 PF11953 Domain of unknown function (DUF3470) FY128_21260 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY128_21260 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY128_21300 PF01758 Sodium Bile acid symporter family FY128_21310 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY128_21330 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21335 PF00005 ABC transporter FY128_21345 PF00664 ABC transporter transmembrane region FY128_21345 PF00005 ABC transporter FY128_21365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY128_21365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY128_21365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY128_21375 PF01548 Transposase FY128_21375 PF02371 Transposase IS116/IS110/IS902 family FY128_21415 PF01757 Acyltransferase family FY128_21420 PF13649 Methyltransferase domain FY128_21420 PF08241 Methyltransferase domain FY128_21465 PF14307 Glycosyltransferase WbsX FY128_21465 PF05045 Rhamnan synthesis protein F FY128_21470 PF08241 Methyltransferase domain FY128_21480 PF02371 Transposase IS116/IS110/IS902 family FY128_21480 PF01548 Transposase FY128_21495 PF00483 Nucleotidyl transferase FY128_21500 PF04321 RmlD substrate binding domain FY128_21505 PF16363 GDP-mannose 4,6 dehydratase FY128_21510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY128_21525 PF01032 FecCD transport family FY128_21530 PF01032 FecCD transport family FY128_21535 PF00005 ABC transporter FY128_21540 PF07715 TonB-dependent Receptor Plug Domain FY128_21545 PF00817 impB/mucB/samB family FY128_21545 PF11799 impB/mucB/samB family C-terminal domain FY128_21550 PF13361 UvrD-like helicase C-terminal domain FY128_21550 PF00580 UvrD/REP helicase N-terminal domain FY128_21560 PF00356 Bacterial regulatory proteins, lacI family FY128_21565 PF01593 Flavin containing amine oxidoreductase FY128_21575 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21580 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21585 PF00005 ABC transporter FY128_21585 PF03459 TOBE domain FY128_21585 PF17912 MalK OB fold domain FY128_21590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_21590 PF00005 ABC transporter FY128_21595 PF00005 ABC transporter FY128_21595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_21600 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_21600 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21605 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21610 PF07729 FCD domain FY128_21610 PF00392 Bacterial regulatory proteins, gntR family FY128_21615 PF03786 D-mannonate dehydratase (UxuA) FY128_21620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_21630 PF13188 PAS domain FY128_21630 PF03707 Bacterial signalling protein N terminal repeat FY128_21630 PF00990 Diguanylate cyclase, GGDEF domain FY128_21630 PF00563 EAL domain FY128_21645 PF02735 Ku70/Ku80 beta-barrel domain FY128_21650 PF01068 ATP dependent DNA ligase domain FY128_21650 PF13298 DNA polymerase Ligase (LigD) FY128_21650 PF04679 ATP dependent DNA ligase C terminal region FY128_21655 PF02735 Ku70/Ku80 beta-barrel domain FY128_21660 PF01384 Phosphate transporter family FY128_21665 PF01865 Protein of unknown function DUF47 FY128_21675 PF00873 AcrB/AcrD/AcrF family FY128_21680 PF13533 Biotin-lipoyl like FY128_21685 PF00486 Transcriptional regulatory protein, C terminal FY128_21685 PF00072 Response regulator receiver domain FY128_21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_21690 PF00672 HAMP domain FY128_21690 PF00512 His Kinase A (phospho-acceptor) domain FY128_21700 PF03466 LysR substrate binding domain FY128_21700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_21705 PF00141 Peroxidase FY128_21710 PF12833 Helix-turn-helix domain FY128_21715 PF07715 TonB-dependent Receptor Plug Domain FY128_21715 PF00593 TonB dependent receptor FY128_21725 PF01032 FecCD transport family FY128_21730 PF01032 FecCD transport family FY128_21735 PF00005 ABC transporter FY128_21740 PF01638 HxlR-like helix-turn-helix FY128_21755 PF10114 Sensory domain found in PocR FY128_21755 PF12833 Helix-turn-helix domain FY128_21765 PF02371 Transposase IS116/IS110/IS902 family FY128_21765 PF01548 Transposase FY128_21770 PF00171 Aldehyde dehydrogenase family FY128_21775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_21775 PF03466 LysR substrate binding domain FY128_21780 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY128_21785 PF12411 Choline sulfatase enzyme C terminal FY128_21785 PF00884 Sulfatase FY128_21790 PF00294 pfkB family carbohydrate kinase FY128_21795 PF03459 TOBE domain FY128_21795 PF17912 MalK OB fold domain FY128_21795 PF00005 ABC transporter FY128_21800 PF14698 Argininosuccinate lyase C-terminal FY128_21800 PF00206 Lyase FY128_21805 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21810 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21815 PF13416 Bacterial extracellular solute-binding protein FY128_21820 PF00480 ROK family FY128_21845 PF02056 Family 4 glycosyl hydrolase FY128_21845 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY128_21850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_21855 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21860 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_21860 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_21865 PF00005 ABC transporter FY128_21870 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY128_21870 PF02056 Family 4 glycosyl hydrolase FY128_21875 PF13533 Biotin-lipoyl like FY128_21880 PF00005 ABC transporter FY128_21900 PF00072 Response regulator receiver domain FY128_21905 PF12327 FtsZ family, C-terminal domain FY128_21905 PF00091 Tubulin/FtsZ family, GTPase domain FY128_21910 PF07729 FCD domain FY128_21910 PF00392 Bacterial regulatory proteins, gntR family FY128_21915 PF00701 Dihydrodipicolinate synthetase family FY128_21920 PF02615 Malate/L-lactate dehydrogenase FY128_21930 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21935 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21940 PF00005 ABC transporter FY128_21945 PF01266 FAD dependent oxidoreductase FY128_21955 PF05544 Proline racemase FY128_21960 PF00356 Bacterial regulatory proteins, lacI family FY128_21970 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_21975 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21980 PF00528 Binding-protein-dependent transport system inner membrane component FY128_21985 PF00005 ABC transporter FY128_21990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY128_21990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY128_21995 PF00563 EAL domain FY128_21995 PF00990 Diguanylate cyclase, GGDEF domain FY128_21995 PF03707 Bacterial signalling protein N terminal repeat FY128_22000 PF02530 Porin subfamily FY128_22005 PF01979 Amidohydrolase family FY128_22010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_22015 PF00528 Binding-protein-dependent transport system inner membrane component FY128_22020 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_22020 PF00528 Binding-protein-dependent transport system inner membrane component FY128_22025 PF01979 Amidohydrolase family FY128_22030 PF01979 Amidohydrolase family FY128_22035 PF00005 ABC transporter FY128_22035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_22040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_22040 PF00005 ABC transporter FY128_22045 PF07729 FCD domain FY128_22045 PF00392 Bacterial regulatory proteins, gntR family FY128_22050 PF01613 Flavin reductase like domain FY128_22055 PF01177 Asp/Glu/Hydantoin racemase FY128_22060 PF03466 LysR substrate binding domain FY128_22060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_22070 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY128_22070 PF00037 4Fe-4S binding domain FY128_22070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY128_22075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY128_22075 PF12838 4Fe-4S dicluster domain FY128_22075 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY128_22075 PF00384 Molybdopterin oxidoreductase FY128_22075 PF01568 Molydopterin dinucleotide binding domain FY128_22085 PF07690 Major Facilitator Superfamily FY128_22090 PF00583 Acetyltransferase (GNAT) family FY128_22090 PF13508 Acetyltransferase (GNAT) domain FY128_22095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_22100 PF00072 Response regulator receiver domain FY128_22100 PF00486 Transcriptional regulatory protein, C terminal FY128_22120 PF05532 CsbD-like FY128_22125 PF00196 Bacterial regulatory proteins, luxR family FY128_22125 PF00072 Response regulator receiver domain FY128_22130 PF03401 Tripartite tricarboxylate transporter family receptor FY128_22135 PF00005 ABC transporter FY128_22135 PF00664 ABC transporter transmembrane region FY128_22155 PF18011 C-terminal domain found in long catalases FY128_22155 PF06628 Catalase-related immune-responsive FY128_22155 PF00199 Catalase FY128_22210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_22210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY128_22225 PF00563 EAL domain FY128_22225 PF01590 GAF domain FY128_22225 PF00360 Phytochrome region FY128_22225 PF00990 Diguanylate cyclase, GGDEF domain FY128_22235 PF13302 Acetyltransferase (GNAT) domain FY128_22240 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FY128_22285 PF04542 Sigma-70 region 2 FY128_22285 PF08281 Sigma-70, region 4 FY128_22300 PF00440 Bacterial regulatory proteins, tetR family FY128_22320 PF00005 ABC transporter FY128_22325 PF00528 Binding-protein-dependent transport system inner membrane component FY128_22330 PF00528 Binding-protein-dependent transport system inner membrane component FY128_22335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_22340 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FY128_22345 PF00557 Metallopeptidase family M24 FY128_22345 PF01321 Creatinase/Prolidase N-terminal domain FY128_22350 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY128_22355 PF00291 Pyridoxal-phosphate dependent enzyme FY128_22360 PF00155 Aminotransferase class I and II FY128_22360 PF00392 Bacterial regulatory proteins, gntR family FY128_22365 PF00202 Aminotransferase class-III FY128_22370 PF00171 Aldehyde dehydrogenase family FY128_22375 PF01037 Lrp/AsnC ligand binding domain FY128_22385 PF02563 Polysaccharide biosynthesis/export protein FY128_22400 PF14331 ImcF-related N-terminal domain FY128_22400 PF06761 Intracellular multiplication and human macrophage-killing FY128_22400 PF06744 Type VI secretion protein IcmF C-terminal FY128_22405 PF00691 OmpA family FY128_22410 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY128_22425 PF05947 Type VI secretion system, TssF FY128_22445 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY128_22450 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY128_22460 PF00004 ATPase family associated with various cellular activities (AAA) FY128_22460 PF07724 AAA domain (Cdc48 subfamily) FY128_22460 PF17871 AAA lid domain FY128_22460 PF10431 C-terminal, D2-small domain, of ClpB protein FY128_22480 PF06715 Gp5 C-terminal repeat (3 copies) FY128_22480 PF04717 Type VI secretion system, phage-baseplate injector FY128_22540 PF02308 MgtC family FY128_22545 PF01443 Viral (Superfamily 1) RNA helicase FY128_22545 PF03389 MobA/MobL family FY128_22545 PF17841 BID domain of Bartonella effector protein (Bep) FY128_22545 PF17841 BID domain of Bartonella effector protein (Bep) FY128_22545 PF01443 Viral (Superfamily 1) RNA helicase FY128_22545 PF03389 MobA/MobL family FY128_22610 PF03358 NADPH-dependent FMN reductase FY128_22610 PF01566 Natural resistance-associated macrophage protein FY128_22625 PF06628 Catalase-related immune-responsive FY128_22625 PF00199 Catalase FY128_22625 PF18011 C-terminal domain found in long catalases FY128_22630 PF05974 Domain of unknown function (DUF892) FY128_22655 PF04542 Sigma-70 region 2 FY128_22655 PF08281 Sigma-70, region 4 FY128_22660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY128_22660 PF11941 Domain of unknown function (DUF3459) FY128_22660 PF00128 Alpha amylase, catalytic domain FY128_22665 PF00534 Glycosyl transferases group 1 FY128_22665 PF08323 Starch synthase catalytic domain FY128_22735 PF13505 Outer membrane protein beta-barrel domain FY128_22745 PF00300 Histidine phosphatase superfamily (branch 1) FY128_22770 PF00665 Integrase core domain FY128_22775 PF01695 IstB-like ATP binding protein FY128_22785 PF00565 Staphylococcal nuclease homologue FY128_22835 PF00376 MerR family regulatory protein FY128_22835 PF13614 AAA domain FY128_22840 PF02195 ParB-like nuclease domain FY128_22840 PF07506 RepB plasmid partitioning protein FY128_22845 PF03428 Replication protein C N-terminal domain FY128_22845 PF11800 Replication protein C C-terminal region FY128_22865 PF00732 GMC oxidoreductase FY128_22865 PF05199 GMC oxidoreductase FY128_22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_22870 PF03466 LysR substrate binding domain FY128_22910 PF14791 DNA polymerase beta thumb FY128_22910 PF14716 Helix-hairpin-helix domain FY128_22910 PF02811 PHP domain FY128_22915 PF00005 ABC transporter FY128_22915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_22920 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_22920 PF00528 Binding-protein-dependent transport system inner membrane component FY128_22925 PF00528 Binding-protein-dependent transport system inner membrane component FY128_22930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_22935 PF00465 Iron-containing alcohol dehydrogenase FY128_22940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_22940 PF03466 LysR substrate binding domain FY128_22945 PF13419 Haloacid dehalogenase-like hydrolase FY128_22970 PF03328 HpcH/HpaI aldolase/citrate lyase family FY128_22975 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY128_22980 PF00775 Dioxygenase FY128_22980 PF04444 Catechol dioxygenase N terminus FY128_23010 PF11972 HTH DNA binding domain FY128_23010 PF07756 Protein of unknown function (DUF1612) FY128_23075 PF00271 Helicase conserved C-terminal domain FY128_23105 PF02371 Transposase IS116/IS110/IS902 family FY128_23105 PF01548 Transposase FY128_23115 PF07859 alpha/beta hydrolase fold FY128_23125 PF01638 HxlR-like helix-turn-helix FY128_23135 PF07690 Major Facilitator Superfamily FY128_23145 PF01177 Asp/Glu/Hydantoin racemase FY128_23150 PF14525 AraC-binding-like domain FY128_23150 PF12833 Helix-turn-helix domain FY128_23155 PF00106 short chain dehydrogenase FY128_23170 PF01292 Prokaryotic cytochrome b561 FY128_23175 PF00174 Oxidoreductase molybdopterin binding domain FY128_23190 PF01817 Chorismate mutase type II FY128_23190 PF02153 Prephenate dehydrogenase FY128_23195 PF03466 LysR substrate binding domain FY128_23195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_23200 PF00106 short chain dehydrogenase FY128_23205 PF00561 alpha/beta hydrolase fold FY128_23215 PF17969 L,D-transpeptidase C-terminal domain FY128_23215 PF03734 L,D-transpeptidase catalytic domain FY128_23225 PF01042 Endoribonuclease L-PSP FY128_23240 PF10011 Predicted membrane protein (DUF2254) FY128_23250 PF13610 DDE domain FY128_23265 PF00106 short chain dehydrogenase FY128_23280 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23285 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23305 PF05114 Protein of unknown function (DUF692) FY128_23330 PF07063 Domain of unknown function (DUF1338) FY128_23335 PF00171 Aldehyde dehydrogenase family FY128_23340 PF00155 Aminotransferase class I and II FY128_23345 PF13183 4Fe-4S dicluster domain FY128_23345 PF01565 FAD binding domain FY128_23345 PF02913 FAD linked oxidases, C-terminal domain FY128_23350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY128_23350 PF00205 Thiamine pyrophosphate enzyme, central domain FY128_23350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY128_23355 PF01266 FAD dependent oxidoreductase FY128_23360 PF00005 ABC transporter FY128_23365 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23380 PF03466 LysR substrate binding domain FY128_23380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_23390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY128_23395 PF00873 AcrB/AcrD/AcrF family FY128_23410 PF07715 TonB-dependent Receptor Plug Domain FY128_23410 PF00593 TonB dependent receptor FY128_23425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_23430 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23435 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_23435 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23440 PF00005 ABC transporter FY128_23440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_23445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_23445 PF00005 ABC transporter FY128_23455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_23455 PF03466 LysR substrate binding domain FY128_23460 PF00144 Beta-lactamase FY128_23465 PF07519 Tannase and feruloyl esterase FY128_23485 PF01638 HxlR-like helix-turn-helix FY128_23495 PF00106 short chain dehydrogenase FY128_23500 PF00106 short chain dehydrogenase FY128_23510 PF01381 Helix-turn-helix FY128_23515 PF07804 HipA-like C-terminal domain FY128_23515 PF13657 HipA N-terminal domain FY128_23520 PF01381 Helix-turn-helix FY128_23525 PF05973 Phage derived protein Gp49-like (DUF891) FY128_23535 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY128_23560 PF00586 AIR synthase related protein, N-terminal domain FY128_23560 PF02769 AIR synthase related protein, C-terminal domain FY128_23570 PF04055 Radical SAM superfamily FY128_23570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY128_23575 PF00795 Carbon-nitrogen hydrolase FY128_23585 PF00392 Bacterial regulatory proteins, gntR family FY128_23585 PF00155 Aminotransferase class I and II FY128_23625 PF13188 PAS domain FY128_23625 PF00563 EAL domain FY128_23625 PF00990 Diguanylate cyclase, GGDEF domain FY128_23625 PF03707 Bacterial signalling protein N terminal repeat FY128_23630 PF07694 5TMR of 5TMR-LYT FY128_23630 PF00990 Diguanylate cyclase, GGDEF domain FY128_23645 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23650 PF00005 ABC transporter FY128_23650 PF08402 TOBE domain FY128_23655 PF00459 Inositol monophosphatase family FY128_23660 PF01418 Helix-turn-helix domain, rpiR family FY128_23660 PF02685 Glucokinase FY128_23660 PF01380 SIS domain FY128_23675 PF00196 Bacterial regulatory proteins, luxR family FY128_23675 PF00072 Response regulator receiver domain FY128_23680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_23680 PF00512 His Kinase A (phospho-acceptor) domain FY128_23680 PF00989 PAS fold FY128_23685 PF00106 short chain dehydrogenase FY128_23690 PF03472 Autoinducer binding domain FY128_23690 PF00196 Bacterial regulatory proteins, luxR family FY128_23720 PF03466 LysR substrate binding domain FY128_23720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_23725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_23725 PF03466 LysR substrate binding domain FY128_23730 PF01966 HD domain FY128_23730 PF01336 OB-fold nucleic acid binding domain FY128_23735 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23740 PF00528 Binding-protein-dependent transport system inner membrane component FY128_23745 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_23750 PF00005 ABC transporter FY128_23755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY128_23755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY128_23765 PF01042 Endoribonuclease L-PSP FY128_23775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY128_23780 PF00356 Bacterial regulatory proteins, lacI family FY128_23790 PF02653 Branched-chain amino acid transport system / permease component FY128_23795 PF00005 ABC transporter FY128_23805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_23805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_23815 PF00392 Bacterial regulatory proteins, gntR family FY128_23815 PF07729 FCD domain FY128_23825 PF01820 D-ala D-ala ligase N-terminus FY128_23825 PF07478 D-ala D-ala ligase C-terminus FY128_23840 PF01850 PIN domain FY128_23845 PF09957 Bacterial antitoxin of type II TA system, VapB FY128_23850 PF02311 AraC-like ligand binding domain FY128_23850 PF12833 Helix-turn-helix domain FY128_23865 PF00561 alpha/beta hydrolase fold FY128_23885 PF00196 Bacterial regulatory proteins, luxR family FY128_23895 PF00857 Isochorismatase family FY128_23900 PF00561 alpha/beta hydrolase fold FY128_23910 PF00561 alpha/beta hydrolase fold FY128_23920 PF00106 short chain dehydrogenase FY128_23925 PF02627 Carboxymuconolactone decarboxylase family FY128_23940 PF02082 Transcriptional regulator FY128_23945 PF00440 Bacterial regulatory proteins, tetR family FY128_23960 PF07690 Major Facilitator Superfamily FY128_23965 PF13411 MerR HTH family regulatory protein FY128_23965 PF06445 GyrI-like small molecule binding domain FY128_23970 PF00512 His Kinase A (phospho-acceptor) domain FY128_23970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_23970 PF16527 Two-component sensor protein CpxA, periplasmic domain FY128_23970 PF00672 HAMP domain FY128_23975 PF00072 Response regulator receiver domain FY128_23975 PF00486 Transcriptional regulatory protein, C terminal FY128_23980 PF02321 Outer membrane efflux protein FY128_23985 PF13533 Biotin-lipoyl like FY128_23990 PF00873 AcrB/AcrD/AcrF family FY128_24015 PF00440 Bacterial regulatory proteins, tetR family FY128_24025 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY128_24040 PF13291 ACT domain FY128_24040 PF00291 Pyridoxal-phosphate dependent enzyme FY128_24045 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY128_24060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_24060 PF00672 HAMP domain FY128_24080 PF13298 DNA polymerase Ligase (LigD) FY128_24080 PF01068 ATP dependent DNA ligase domain FY128_24080 PF04679 ATP dependent DNA ligase C terminal region FY128_24095 PF14579 Helix-hairpin-helix motif FY128_24095 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY128_24095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY128_24095 PF02811 PHP domain FY128_24115 PF05284 Protein of unknown function (DUF736) FY128_24120 PF00216 Bacterial DNA-binding protein FY128_24125 PF05406 WGR domain FY128_24130 PF02534 Type IV secretory system Conjugative DNA transfer FY128_24145 PF17841 BID domain of Bartonella effector protein (Bep) FY128_24145 PF03389 MobA/MobL family FY128_24145 PF01443 Viral (Superfamily 1) RNA helicase FY128_24170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_24170 PF00672 HAMP domain FY128_24175 PF01022 Bacterial regulatory protein, arsR family FY128_24180 PF03466 LysR substrate binding domain FY128_24180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_24190 PF00654 Voltage gated chloride channel FY128_24210 PF00196 Bacterial regulatory proteins, luxR family FY128_24210 PF03472 Autoinducer binding domain FY128_24215 PF00765 Autoinducer synthase FY128_24225 PF00072 Response regulator receiver domain FY128_24225 PF00486 Transcriptional regulatory protein, C terminal FY128_24230 PF01979 Amidohydrolase family FY128_24250 PF00795 Carbon-nitrogen hydrolase FY128_24260 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY128_24265 PF08402 TOBE domain FY128_24265 PF00005 ABC transporter FY128_24270 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24275 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24280 PF13416 Bacterial extracellular solute-binding protein FY128_24290 PF00005 ABC transporter FY128_24295 PF02687 FtsX-like permease family FY128_24295 PF12704 MacB-like periplasmic core domain FY128_24305 PF01614 Bacterial transcriptional regulator FY128_24305 PF09339 IclR helix-turn-helix domain FY128_24310 PF00171 Aldehyde dehydrogenase family FY128_24315 PF00465 Iron-containing alcohol dehydrogenase FY128_24320 PF00753 Metallo-beta-lactamase superfamily FY128_24360 PF02308 MgtC family FY128_24375 PF02798 Glutathione S-transferase, N-terminal domain FY128_24375 PF00043 Glutathione S-transferase, C-terminal domain FY128_24380 PF01638 HxlR-like helix-turn-helix FY128_24435 PF04956 TrbC/VIRB2 family FY128_24440 PF05101 Type IV secretory pathway, VirB3-like protein FY128_24445 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY128_24450 PF07996 Type IV secretion system proteins FY128_24460 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY128_24470 PF04335 VirB8 protein FY128_24475 PF03524 Conjugal transfer protein FY128_24480 PF03743 Bacterial conjugation TrbI-like protein FY128_24485 PF00437 Type II/IV secretion system protein FY128_24490 PF14760 Rnk N-terminus FY128_24490 PF01272 Transcription elongation factor, GreA/GreB, C-term FY128_24495 PF03449 Transcription elongation factor, N-terminal FY128_24495 PF01272 Transcription elongation factor, GreA/GreB, C-term FY128_24505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FY128_24505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FY128_24525 PF00072 Response regulator receiver domain FY128_24525 PF13426 PAS domain FY128_24525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_24530 PF07536 HWE histidine kinase FY128_24530 PF08447 PAS fold FY128_24530 PF13426 PAS domain FY128_24535 PF00226 DnaJ domain FY128_24540 PF01546 Peptidase family M20/M25/M40 FY128_24540 PF07687 Peptidase dimerisation domain FY128_24545 PF00005 ABC transporter FY128_24545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_24550 PF00005 ABC transporter FY128_24550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_24555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_24555 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24560 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_24570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_24570 PF03466 LysR substrate binding domain FY128_24580 PF13454 FAD-NAD(P)-binding FY128_24585 PF01323 DSBA-like thioredoxin domain FY128_24590 PF01244 Membrane dipeptidase (Peptidase family M19) FY128_24600 PF00005 ABC transporter FY128_24600 PF08402 TOBE domain FY128_24605 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24610 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24615 PF00135 Carboxylesterase family FY128_24620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_24620 PF03466 LysR substrate binding domain FY128_24640 PF10011 Predicted membrane protein (DUF2254) FY128_24660 PF00072 Response regulator receiver domain FY128_24660 PF00486 Transcriptional regulatory protein, C terminal FY128_24670 PF00072 Response regulator receiver domain FY128_24670 PF00486 Transcriptional regulatory protein, C terminal FY128_24680 PF12951 Passenger-associated-transport-repeat FY128_24690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_24690 PF00512 His Kinase A (phospho-acceptor) domain FY128_24690 PF00672 HAMP domain FY128_24705 PF00072 Response regulator receiver domain FY128_24705 PF00486 Transcriptional regulatory protein, C terminal FY128_24710 PF05443 ROS/MUCR transcriptional regulator protein FY128_24730 PF00563 EAL domain FY128_24730 PF03707 Bacterial signalling protein N terminal repeat FY128_24730 PF00990 Diguanylate cyclase, GGDEF domain FY128_24740 PF02796 Helix-turn-helix domain of resolvase FY128_24740 PF00239 Resolvase, N terminal domain FY128_24750 PF00239 Resolvase, N terminal domain FY128_24750 PF02796 Helix-turn-helix domain of resolvase FY128_24765 PF01850 PIN domain FY128_24770 PF00701 Dihydrodipicolinate synthetase family FY128_24775 PF08450 SMP-30/Gluconolactonase/LRE-like region FY128_24780 PF07729 FCD domain FY128_24780 PF00392 Bacterial regulatory proteins, gntR family FY128_24785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_24790 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24795 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_24795 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24800 PF00005 ABC transporter FY128_24800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_24805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_24805 PF13378 Enolase C-terminal domain-like FY128_24830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY128_24835 PF03480 Bacterial extracellular solute-binding protein, family 7 FY128_24840 PF00072 Response regulator receiver domain FY128_24840 PF00196 Bacterial regulatory proteins, luxR family FY128_24845 PF07730 Histidine kinase FY128_24845 PF17200 Single Cache domain 2 FY128_24850 PF06965 Na+/H+ antiporter 1 FY128_24875 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24880 PF08402 TOBE domain FY128_24880 PF00005 ABC transporter FY128_24885 PF00459 Inositol monophosphatase family FY128_24890 PF01594 AI-2E family transporter FY128_24905 PF05035 2-keto-3-deoxy-galactonokinase FY128_24910 PF00701 Dihydrodipicolinate synthetase family FY128_24915 PF13378 Enolase C-terminal domain-like FY128_24915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY128_24925 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24930 PF00528 Binding-protein-dependent transport system inner membrane component FY128_24935 PF00005 ABC transporter FY128_24935 PF17912 MalK OB fold domain FY128_24940 PF16363 GDP-mannose 4,6 dehydratase FY128_24945 PF09339 IclR helix-turn-helix domain FY128_24945 PF01614 Bacterial transcriptional regulator FY128_24955 PF12833 Helix-turn-helix domain FY128_24955 PF02311 AraC-like ligand binding domain FY128_24975 PF13533 Biotin-lipoyl like FY128_24980 PF00561 alpha/beta hydrolase fold FY128_24985 PF01032 FecCD transport family FY128_24990 PF00005 ABC transporter FY128_25000 PF00593 TonB dependent receptor FY128_25000 PF07715 TonB-dependent Receptor Plug Domain FY128_25005 PF01497 Periplasmic binding protein FY128_25015 PF03466 LysR substrate binding domain FY128_25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25020 PF00248 Aldo/keto reductase family FY128_25025 PF03466 LysR substrate binding domain FY128_25025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25030 PF08240 Alcohol dehydrogenase GroES-like domain FY128_25030 PF00107 Zinc-binding dehydrogenase FY128_25035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY128_25035 PF00356 Bacterial regulatory proteins, lacI family FY128_25040 PF01261 Xylose isomerase-like TIM barrel FY128_25045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_25045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_25050 PF01261 Xylose isomerase-like TIM barrel FY128_25065 PF00005 ABC transporter FY128_25070 PF01032 FecCD transport family FY128_25080 PF07715 TonB-dependent Receptor Plug Domain FY128_25080 PF00593 TonB dependent receptor FY128_25105 PF03552 Cellulose synthase FY128_25105 PF07238 PilZ domain FY128_25105 PF00535 Glycosyl transferase family 2 FY128_25125 PF01717 Cobalamin-independent synthase, Catalytic domain FY128_25125 PF08267 Cobalamin-independent synthase, N-terminal domain FY128_25130 PF14525 AraC-binding-like domain FY128_25135 PF00296 Luciferase-like monooxygenase FY128_25140 PF01613 Flavin reductase like domain FY128_25150 PF01627 Hpt domain FY128_25150 PF00512 His Kinase A (phospho-acceptor) domain FY128_25150 PF00672 HAMP domain FY128_25150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_25150 PF17149 Periplasmic sensor domain found in signal transduction proteins FY128_25150 PF00072 Response regulator receiver domain FY128_25155 PF00072 Response regulator receiver domain FY128_25160 PF02203 Tar ligand binding domain homologue FY128_25160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_25160 PF00672 HAMP domain FY128_25170 PF00155 Aminotransferase class I and II FY128_25175 PF00196 Bacterial regulatory proteins, luxR family FY128_25175 PF03472 Autoinducer binding domain FY128_25185 PF00106 short chain dehydrogenase FY128_25190 PF04198 Putative sugar-binding domain FY128_25195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY128_25195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY128_25200 PF02780 Transketolase, C-terminal domain FY128_25200 PF02779 Transketolase, pyrimidine binding domain FY128_25205 PF00456 Transketolase, thiamine diphosphate binding domain FY128_25210 PF02653 Branched-chain amino acid transport system / permease component FY128_25215 PF13407 Periplasmic binding protein domain FY128_25220 PF00005 ABC transporter FY128_25230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY128_25260 PF00106 short chain dehydrogenase FY128_25280 PF03466 LysR substrate binding domain FY128_25280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25290 PF08448 PAS fold FY128_25290 PF00072 Response regulator receiver domain FY128_25290 PF13188 PAS domain FY128_25290 PF00512 His Kinase A (phospho-acceptor) domain FY128_25290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_25295 PF06745 KaiC FY128_25300 PF02678 Pirin FY128_25300 PF17954 Quercetinase C-terminal cupin domain FY128_25305 PF00857 Isochorismatase family FY128_25310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25310 PF03466 LysR substrate binding domain FY128_25315 PF01638 HxlR-like helix-turn-helix FY128_25320 PF16197 Ketoacyl-synthetase C-terminal extension FY128_25320 PF00109 Beta-ketoacyl synthase, N-terminal domain FY128_25320 PF02801 Beta-ketoacyl synthase, C-terminal domain FY128_25320 PF08659 KR domain FY128_25320 PF00550 Phosphopantetheine attachment site FY128_25320 PF14765 Polyketide synthase dehydratase FY128_25320 PF08240 Alcohol dehydrogenase GroES-like domain FY128_25320 PF00698 Acyl transferase domain FY128_25320 PF00107 Zinc-binding dehydrogenase FY128_25325 PF03466 LysR substrate binding domain FY128_25325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25345 PF00970 Oxidoreductase FAD-binding domain FY128_25345 PF00042 Globin FY128_25345 PF00175 Oxidoreductase NAD-binding domain FY128_25350 PF02798 Glutathione S-transferase, N-terminal domain FY128_25355 PF00171 Aldehyde dehydrogenase family FY128_25360 PF03466 LysR substrate binding domain FY128_25360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25385 PF00455 DeoR C terminal sensor domain FY128_25385 PF08220 DeoR-like helix-turn-helix domain FY128_25390 PF13407 Periplasmic binding protein domain FY128_25395 PF00005 ABC transporter FY128_25400 PF02653 Branched-chain amino acid transport system / permease component FY128_25405 PF02653 Branched-chain amino acid transport system / permease component FY128_25415 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY128_25415 PF00294 pfkB family carbohydrate kinase FY128_25420 PF01791 DeoC/LacD family aldolase FY128_25425 PF00171 Aldehyde dehydrogenase family FY128_25430 PF00795 Carbon-nitrogen hydrolase FY128_25435 PF00005 ABC transporter FY128_25435 PF09383 NIL domain FY128_25440 PF00005 ABC transporter FY128_25440 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY128_25450 PF02653 Branched-chain amino acid transport system / permease component FY128_25455 PF13458 Periplasmic binding protein FY128_25485 PF00924 Mechanosensitive ion channel FY128_25500 PF13533 Biotin-lipoyl like FY128_25515 PF06719 AraC-type transcriptional regulator N-terminus FY128_25515 PF12833 Helix-turn-helix domain FY128_25525 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY128_25530 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY128_25535 PF00459 Inositol monophosphatase family FY128_25550 PF01546 Peptidase family M20/M25/M40 FY128_25555 PF00455 DeoR C terminal sensor domain FY128_25555 PF08220 DeoR-like helix-turn-helix domain FY128_25560 PF00005 ABC transporter FY128_25560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_25565 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_25565 PF00528 Binding-protein-dependent transport system inner membrane component FY128_25570 PF00528 Binding-protein-dependent transport system inner membrane component FY128_25575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_25585 PF17912 MalK OB fold domain FY128_25585 PF00005 ABC transporter FY128_25590 PF00107 Zinc-binding dehydrogenase FY128_25590 PF08240 Alcohol dehydrogenase GroES-like domain FY128_25595 PF00528 Binding-protein-dependent transport system inner membrane component FY128_25600 PF00528 Binding-protein-dependent transport system inner membrane component FY128_25605 PF01547 Bacterial extracellular solute-binding protein FY128_25620 PF12833 Helix-turn-helix domain FY128_25625 PF07715 TonB-dependent Receptor Plug Domain FY128_25625 PF00593 TonB dependent receptor FY128_25635 PF00183 Hsp90 protein FY128_25640 PF13649 Methyltransferase domain FY128_25645 PF01161 Phosphatidylethanolamine-binding protein FY128_25655 PF00005 ABC transporter FY128_25655 PF00664 ABC transporter transmembrane region FY128_25660 PF12900 Pyridoxamine 5'-phosphate oxidase FY128_25680 PF00011 Hsp20/alpha crystallin family FY128_25690 PF00403 Heavy-metal-associated domain FY128_25695 PF09363 XFP C-terminal domain FY128_25695 PF09364 XFP N-terminal domain FY128_25695 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase FY128_25700 PF00871 Acetokinase family FY128_25710 PF00072 Response regulator receiver domain FY128_25710 PF00486 Transcriptional regulatory protein, C terminal FY128_25715 PF00325 Bacterial regulatory proteins, crp family FY128_25715 PF00027 Cyclic nucleotide-binding domain FY128_25720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_25720 PF13426 PAS domain FY128_25720 PF00072 Response regulator receiver domain FY128_25730 PF00491 Arginase family FY128_25735 PF01522 Polysaccharide deacetylase FY128_25740 PF03972 MmgE/PrpD family FY128_25750 PF00005 ABC transporter FY128_25755 PF00528 Binding-protein-dependent transport system inner membrane component FY128_25760 PF14698 Argininosuccinate lyase C-terminal FY128_25760 PF00206 Lyase FY128_25775 PF12282 Signal transduction histidine kinase FY128_25775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_25775 PF07568 Histidine kinase FY128_25780 PF00072 Response regulator receiver domain FY128_25780 PF13426 PAS domain FY128_25780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_25795 PF03466 LysR substrate binding domain FY128_25800 PF00248 Aldo/keto reductase family FY128_25835 PF00313 'Cold-shock' DNA-binding domain FY128_25845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY128_25845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY128_25850 PF00005 ABC transporter FY128_25855 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY128_25860 PF00356 Bacterial regulatory proteins, lacI family FY128_25865 PF13614 AAA domain FY128_25870 PF02195 ParB-like nuclease domain FY128_25870 PF07506 RepB plasmid partitioning protein FY128_25875 PF11800 Replication protein C C-terminal region FY128_25875 PF03428 Replication protein C N-terminal domain FY128_25880 PF00239 Resolvase, N terminal domain FY128_25885 PF11972 HTH DNA binding domain FY128_25885 PF07756 Protein of unknown function (DUF1612) FY128_25905 PF00239 Resolvase, N terminal domain FY128_25905 PF02796 Helix-turn-helix domain of resolvase FY128_25910 PF07690 Major Facilitator Superfamily FY128_25920 PF08808 RES domain FY128_25955 PF02899 Phage integrase, N-terminal SAM-like domain FY128_25955 PF00589 Phage integrase family FY128_25960 PF00293 NUDIX domain FY128_25975 PF13018 Extended Signal Peptide of Type V secretion system FY128_25975 PF02661 Fic/DOC family FY128_25975 PF13332 Hemagglutinin repeat FY128_25975 PF05860 haemagglutination activity domain FY128_25975 PF03543 Yersinia/Haemophilus virulence surface antigen FY128_26000 PF17762 HTH domain found in ParB protein FY128_26000 PF02195 ParB-like nuclease domain FY128_26025 PF08274 PhnA Zinc-Ribbon FY128_26025 PF03831 PhnA domain FY128_26045 PF01810 LysE type translocator FY128_26095 PF00293 NUDIX domain FY128_26110 PF05284 Protein of unknown function (DUF736) FY128_26115 PF00216 Bacterial DNA-binding protein FY128_26135 PF02534 Type IV secretory system Conjugative DNA transfer FY128_26140 PF06412 Conjugal transfer protein TraD FY128_26145 PF07820 TraC-like protein FY128_26150 PF01443 Viral (Superfamily 1) RNA helicase FY128_26150 PF03389 MobA/MobL family FY128_26150 PF17841 BID domain of Bartonella effector protein (Bep) FY128_26155 PF10502 Signal peptidase, peptidase S26 FY128_26160 PF00795 Carbon-nitrogen hydrolase FY128_26165 PF06871 TraH_2 FY128_26170 PF09228 Prokaryotic Transcriptional repressor TraM FY128_26175 PF08447 PAS fold FY128_26175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY128_26175 PF13426 PAS domain FY128_26185 PF03472 Autoinducer binding domain FY128_26185 PF00196 Bacterial regulatory proteins, luxR family FY128_26190 PF00128 Alpha amylase, catalytic domain FY128_26195 PF02690 Na+/Pi-cotransporter FY128_26205 PF08220 DeoR-like helix-turn-helix domain FY128_26205 PF00455 DeoR C terminal sensor domain FY128_26210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_26215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_26215 PF00005 ABC transporter FY128_26220 PF00005 ABC transporter FY128_26220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_26225 PF00528 Binding-protein-dependent transport system inner membrane component FY128_26230 PF00528 Binding-protein-dependent transport system inner membrane component FY128_26230 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_26235 PF03009 Glycerophosphoryl diester phosphodiesterase family FY128_26240 PF00459 Inositol monophosphatase family FY128_26265 PF00067 Cytochrome P450 FY128_26270 PF00067 Cytochrome P450 FY128_26285 PF06903 VirK protein FY128_26320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY128_26320 PF00512 His Kinase A (phospho-acceptor) domain FY128_26325 PF01464 Transglycosylase SLT domain FY128_26330 PF04956 TrbC/VIRB2 family FY128_26335 PF05101 Type IV secretory pathway, VirB3-like protein FY128_26340 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY128_26350 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY128_26355 PF17413 Outer membrane lipoprotein virB7 FY128_26360 PF04335 VirB8 protein FY128_26365 PF03524 Conjugal transfer protein FY128_26370 PF03743 Bacterial conjugation TrbI-like protein FY128_26375 PF00437 Type II/IV secretion system protein FY128_26380 PF00486 Transcriptional regulatory protein, C terminal FY128_26380 PF00072 Response regulator receiver domain FY128_26385 PF07181 VirC2 protein FY128_26390 PF07015 VirC1 protein FY128_26395 PF07328 T-DNA border endonuclease VirD1 FY128_26400 PF03432 Relaxase/Mobilisation nuclease domain FY128_26410 PF02534 Type IV secretory system Conjugative DNA transfer FY128_26430 PF12189 Single-strand DNA-binding protein FY128_26435 PF07229 VirE2 FY128_26455 PF05717 IS66 Orf2 like protein FY128_26460 PF03472 Autoinducer binding domain FY128_26460 PF00196 Bacterial regulatory proteins, luxR family FY128_26475 PF00459 Inositol monophosphatase family FY128_26510 PF02027 RolB/RolC glucosidase family FY128_26515 PF01425 Amidase FY128_26520 PF01593 Flavin containing amine oxidoreductase FY128_26520 PF02027 RolB/RolC glucosidase family FY128_26530 PF02027 RolB/RolC glucosidase family FY128_26535 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY128_26545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY128_26545 PF00005 ABC transporter FY128_26550 PF12911 N-terminal TM domain of oligopeptide transport permease C FY128_26550 PF00528 Binding-protein-dependent transport system inner membrane component FY128_26555 PF00528 Binding-protein-dependent transport system inner membrane component FY128_26560 PF01266 FAD dependent oxidoreductase FY128_26565 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY128_26565 PF17806 Sarcosine oxidase A3 domain FY128_26575 PF01266 FAD dependent oxidoreductase FY128_26580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_26580 PF03466 LysR substrate binding domain FY128_26585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY128_26590 PF01968 Hydantoinase/oxoprolinase FY128_26590 PF05378 Hydantoinase/oxoprolinase N-terminal region FY128_26600 PF17763 Glutaminase/Asparaginase C-terminal domain FY128_26600 PF00710 Asparaginase, N-terminal FY128_26605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY128_26605 PF03466 LysR substrate binding domain FY128_26615 PF00528 Binding-protein-dependent transport system inner membrane component FY128_26625 PF08402 TOBE domain FY128_26625 PF00005 ABC transporter FY128_26635 PF03743 Bacterial conjugation TrbI-like protein FY128_26645 PF03524 Conjugal transfer protein FY128_26650 PF04335 VirB8 protein FY128_26655 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY128_26660 PF10907 Protein of unknown function (DUF2749) FY128_26670 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY128_26675 PF05101 Type IV secretory pathway, VirB3-like protein FY128_26680 PF04956 TrbC/VIRB2 family FY128_26685 PF00437 Type II/IV secretion system protein FY128_26690 PF00765 Autoinducer synthase FY128_26710 PF01381 Helix-turn-helix FY128_26780 PF00437 Type II/IV secretion system protein FY128_26785 PF03743 Bacterial conjugation TrbI-like protein FY128_26795 PF04335 VirB8 protein FY128_26815 PF01464 Transglycosylase SLT domain FY128_26820 PF04956 TrbC/VIRB2 family FY128_26830 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY128_26835 PF01551 Peptidase family M23 FY128_26835 PF10145 Phage-related minor tail protein FY128_26835 PF01464 Transglycosylase SLT domain FY128_26905 PF03895 YadA-like membrane anchor domain FY128_26910 PF02530 Porin subfamily FY128_26920 PF01381 Helix-turn-helix FY128_26935 PF13298 DNA polymerase Ligase (LigD) FY128_26935 PF01068 ATP dependent DNA ligase domain FY128_26935 PF04679 ATP dependent DNA ligase C terminal region FY128_26945 PF06067 Domain of unknown function (DUF932) FY128_26955 PF01548 Transposase FY128_26955 PF02371 Transposase IS116/IS110/IS902 family