locus-tag class description FY129_00005 PF00308 Bacterial dnaA protein FY129_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY129_00005 PF11638 DnaA N-terminal domain FY129_00010 PF06969 HemN C-terminal domain FY129_00010 PF04055 Radical SAM superfamily FY129_00015 PF01725 Ham1 family FY129_00020 PF01138 3' exoribonuclease family, domain 1 FY129_00020 PF03725 3' exoribonuclease family, domain 2 FY129_00025 PF01628 HrcA protein C terminal domain FY129_00030 PF01025 GrpE FY129_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY129_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY129_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY129_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY129_00045 PF04963 Sigma-54 factor, core binding domain FY129_00045 PF04552 Sigma-54, DNA binding domain FY129_00050 PF00005 ABC transporter FY129_00055 PF03968 OstA-like protein FY129_00065 PF01343 Peptidase family S49 FY129_00070 PF00216 Bacterial DNA-binding protein FY129_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY129_00080 PF02926 THUMP domain FY129_00080 PF01170 Putative RNA methylase family UPF0020 FY129_00085 PF00588 SpoU rRNA Methylase family FY129_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY129_00090 PF01252 Signal peptidase (SPase) II FY129_00095 PF00672 HAMP domain FY129_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_00095 PF00512 His Kinase A (phospho-acceptor) domain FY129_00095 PF01627 Hpt domain FY129_00095 PF00072 Response regulator receiver domain FY129_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY129_00105 PF00488 MutS domain V FY129_00105 PF05192 MutS domain III FY129_00105 PF05190 MutS family domain IV FY129_00105 PF05188 MutS domain II FY129_00105 PF01624 MutS domain I FY129_00110 PF01842 ACT domain FY129_00110 PF08335 GlnD PII-uridylyltransferase FY129_00110 PF01966 HD domain FY129_00110 PF01909 Nucleotidyltransferase domain FY129_00115 PF03023 Lipid II flippase MurJ FY129_00125 PF00579 tRNA synthetases class I (W and Y) FY129_00135 PF01106 NifU-like domain FY129_00140 PF00814 Glycoprotease family FY129_00150 PF01475 Ferric uptake regulator family FY129_00155 PF01553 Acyltransferase FY129_00160 PF04055 Radical SAM superfamily FY129_00160 PF01938 TRAM domain FY129_00160 PF00919 Uncharacterized protein family UPF0004 FY129_00165 PF02562 PhoH-like protein FY129_00170 PF02130 Uncharacterized protein family UPF0054 FY129_00175 PF03471 Transporter associated domain FY129_00175 PF00571 CBS domain FY129_00180 PF00795 Carbon-nitrogen hydrolase FY129_00185 PF01381 Helix-turn-helix FY129_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY129_00190 PF02772 S-adenosylmethionine synthetase, central domain FY129_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY129_00195 PF02390 Putative methyltransferase FY129_00200 PF00294 pfkB family carbohydrate kinase FY129_00205 PF02646 RmuC family FY129_00210 PF01327 Polypeptide deformylase FY129_00215 PF02911 Formyl transferase, C-terminal domain FY129_00215 PF00551 Formyl transferase FY129_00220 PF01416 tRNA pseudouridine synthase FY129_00230 PF07687 Peptidase dimerisation domain FY129_00230 PF01546 Peptidase family M20/M25/M40 FY129_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY129_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY129_00245 PF00672 HAMP domain FY129_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY129_00255 PF00011 Hsp20/alpha crystallin family FY129_00280 PF00696 Amino acid kinase family FY129_00290 PF01926 50S ribosome-binding GTPase FY129_00295 PF02096 60Kd inner membrane protein FY129_00295 PF14849 YidC periplasmic domain FY129_00300 PF00825 Ribonuclease P FY129_00305 PF00468 Ribosomal protein L34 FY129_00310 PF00672 HAMP domain FY129_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_00310 PF02203 Tar ligand binding domain homologue FY129_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_00315 PF00512 His Kinase A (phospho-acceptor) domain FY129_00325 PF01209 ubiE/COQ5 methyltransferase family FY129_00330 PF00005 ABC transporter FY129_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY129_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY129_00350 PF00149 Calcineurin-like phosphoesterase FY129_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY129_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY129_00365 PF05544 Proline racemase FY129_00370 PF01979 Amidohydrolase family FY129_00375 PF00156 Phosphoribosyl transferase domain FY129_00380 PF00294 pfkB family carbohydrate kinase FY129_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY129_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY129_00400 PF00342 Phosphoglucose isomerase FY129_00405 PF00501 AMP-binding enzyme FY129_00405 PF13193 AMP-binding enzyme C-terminal domain FY129_00410 PF00005 ABC transporter FY129_00410 PF08402 TOBE domain FY129_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY129_00425 PF00593 TonB dependent receptor FY129_00425 PF07715 TonB-dependent Receptor Plug Domain FY129_00445 PF01679 Proteolipid membrane potential modulator FY129_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY129_00475 PF16736 Single Cache-like FY129_00475 PF00989 PAS fold FY129_00475 PF00512 His Kinase A (phospho-acceptor) domain FY129_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_00480 PF12849 PBP superfamily domain FY129_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY129_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY129_00495 PF00005 ABC transporter FY129_00500 PF01895 PhoU domain FY129_00505 PF00072 Response regulator receiver domain FY129_00505 PF00486 Transcriptional regulatory protein, C terminal FY129_00515 PF00202 Aminotransferase class-III FY129_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY129_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY129_00525 PF01430 Hsp33 protein FY129_00530 PF04379 ApaG domain FY129_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY129_00545 PF00692 dUTPase FY129_00555 PF00230 Major intrinsic protein FY129_00595 PF00072 Response regulator receiver domain FY129_00595 PF00196 Bacterial regulatory proteins, luxR family FY129_00605 PF01180 Dihydroorotate dehydrogenase FY129_00620 PF08241 Methyltransferase domain FY129_00640 PF02082 Transcriptional regulator FY129_00645 PF00270 DEAD/DEAH box helicase FY129_00645 PF08494 DEAD/H associated FY129_00645 PF00271 Helicase conserved C-terminal domain FY129_00665 PF01925 Sulfite exporter TauE/SafE FY129_00675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_00675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_00675 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY129_00675 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_00680 PF02803 Thiolase, C-terminal domain FY129_00680 PF00108 Thiolase, N-terminal domain FY129_00685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY129_00685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY129_00685 PF00378 Enoyl-CoA hydratase/isomerase FY129_00705 PF03334 Na+/H+ antiporter subunit FY129_00710 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY129_00715 PF01899 Na+/H+ ion antiporter subunit FY129_00720 PF00361 Proton-conducting membrane transporter FY129_00725 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY129_00730 PF13244 Domain of unknown function (DUF4040) FY129_00730 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY129_00730 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY129_00730 PF00361 Proton-conducting membrane transporter FY129_00740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_00750 PF00072 Response regulator receiver domain FY129_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_00755 PF01584 CheW-like domain FY129_00755 PF02895 Signal transducing histidine kinase, homodimeric domain FY129_00755 PF01627 Hpt domain FY129_00760 PF01739 CheR methyltransferase, SAM binding domain FY129_00760 PF03705 CheR methyltransferase, all-alpha domain FY129_00765 PF01339 CheB methylesterase FY129_00765 PF00072 Response regulator receiver domain FY129_00770 PF00072 Response regulator receiver domain FY129_00775 PF03975 CheD chemotactic sensory transduction FY129_00785 PF01514 Secretory protein of YscJ/FliF family FY129_00785 PF08345 Flagellar M-ring protein C-terminal FY129_00790 PF00196 Bacterial regulatory proteins, luxR family FY129_00790 PF03472 Autoinducer binding domain FY129_00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_00800 PF00672 HAMP domain FY129_00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_00805 PF00072 Response regulator receiver domain FY129_00805 PF01627 Hpt domain FY129_00805 PF00672 HAMP domain FY129_00805 PF00512 His Kinase A (phospho-acceptor) domain FY129_00810 PF01741 Large-conductance mechanosensitive channel, MscL FY129_00815 PF00155 Aminotransferase class I and II FY129_00820 PF01370 NAD dependent epimerase/dehydratase family FY129_00830 PF03884 DNA gyrase inhibitor YacG FY129_00835 PF02545 Maf-like protein FY129_00840 PF01176 Translation initiation factor 1A / IF-1 FY129_00850 PF06793 Uncharacterised protein family (UPF0262) FY129_00855 PF00815 Histidinol dehydrogenase FY129_00865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY129_00880 PF00700 Bacterial flagellin C-terminal helical region FY129_00880 PF00669 Bacterial flagellin N-terminal helical region FY129_00885 PF00700 Bacterial flagellin C-terminal helical region FY129_00885 PF00669 Bacterial flagellin N-terminal helical region FY129_00890 PF00700 Bacterial flagellin C-terminal helical region FY129_00890 PF00669 Bacterial flagellin N-terminal helical region FY129_00895 PF00813 FliP family FY129_00905 PF02107 Flagellar L-ring protein FY129_00915 PF02119 Flagellar P-ring protein FY129_00920 PF13144 Chaperone for flagella basal body P-ring formation FY129_00925 PF00460 Flagella basal body rod protein FY129_00925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY129_00930 PF02049 Flagellar hook-basal body complex protein FliE FY129_00935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY129_00940 PF00460 Flagella basal body rod protein FY129_00950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY129_00950 PF18269 T3SS EscN ATPase C-terminal domain FY129_00955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY129_00955 PF00460 Flagella basal body rod protein FY129_00965 PF01618 MotA/TolQ/ExbB proton channel family FY129_00970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY129_00975 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY129_00980 PF14841 FliG middle domain FY129_00980 PF14842 FliG N-terminal domain FY129_00980 PF01706 FliG C-terminal domain FY129_00985 PF01312 FlhB HrpN YscU SpaS Family FY129_00995 PF00669 Bacterial flagellin N-terminal helical region FY129_00995 PF00700 Bacterial flagellin C-terminal helical region FY129_01010 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY129_01010 PF00691 OmpA family FY129_01030 PF00486 Transcriptional regulatory protein, C terminal FY129_01035 PF07559 Flagellar basal body protein FlaE FY129_01035 PF00460 Flagella basal body rod protein FY129_01035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY129_01055 PF07378 Flagellar protein FlbT FY129_01060 PF03963 Flagellar hook capping protein - N-terminal region FY129_01065 PF01313 Bacterial export proteins, family 3 FY129_01070 PF00771 FHIPEP family FY129_01075 PF01311 Bacterial export proteins, family 1 FY129_01110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY129_01110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY129_01115 PF00356 Bacterial regulatory proteins, lacI family FY129_01120 PF01547 Bacterial extracellular solute-binding protein FY129_01125 PF00528 Binding-protein-dependent transport system inner membrane component FY129_01130 PF00528 Binding-protein-dependent transport system inner membrane component FY129_01135 PF00128 Alpha amylase, catalytic domain FY129_01140 PF00005 ABC transporter FY129_01140 PF17912 MalK OB fold domain FY129_01140 PF03459 TOBE domain FY129_01155 PF00920 Dehydratase family FY129_01160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY129_01165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY129_01165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY129_01170 PF01266 FAD dependent oxidoreductase FY129_01175 PF00120 Glutamine synthetase, catalytic domain FY129_01200 PF00463 Isocitrate lyase family FY129_01205 PF01381 Helix-turn-helix FY129_01205 PF09856 Predicted transcriptional regulator (DUF2083) FY129_01205 PF06114 IrrE N-terminal-like domain FY129_01210 PF13416 Bacterial extracellular solute-binding protein FY129_01215 PF00005 ABC transporter FY129_01215 PF08402 TOBE domain FY129_01220 PF00528 Binding-protein-dependent transport system inner membrane component FY129_01225 PF00528 Binding-protein-dependent transport system inner membrane component FY129_01230 PF00528 Binding-protein-dependent transport system inner membrane component FY129_01235 PF13188 PAS domain FY129_01235 PF13426 PAS domain FY129_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_01235 PF00512 His Kinase A (phospho-acceptor) domain FY129_01235 PF00989 PAS fold FY129_01245 PF02541 Ppx/GppA phosphatase family FY129_01250 PF01728 FtsJ-like methyltransferase FY129_01255 PF07690 Major Facilitator Superfamily FY129_01260 PF00753 Metallo-beta-lactamase superfamily FY129_01265 PF00478 IMP dehydrogenase / GMP reductase domain FY129_01265 PF00571 CBS domain FY129_01275 PF00107 Zinc-binding dehydrogenase FY129_01275 PF08240 Alcohol dehydrogenase GroES-like domain FY129_01280 PF01738 Dienelactone hydrolase family FY129_01285 PF00994 Probable molybdopterin binding domain FY129_01290 PF08544 GHMP kinases C terminal FY129_01290 PF00288 GHMP kinases N terminal domain FY129_01300 PF00348 Polyprenyl synthetase FY129_01315 PF01343 Peptidase family S49 FY129_01315 PF06965 Na+/H+ antiporter 1 FY129_01325 PF02091 Glycyl-tRNA synthetase alpha subunit FY129_01335 PF04011 LemA family FY129_01340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY129_01350 PF05746 DALR anticodon binding domain FY129_01350 PF02092 Glycyl-tRNA synthetase beta subunit FY129_01355 PF04463 Protein of unknown function (DUF523) FY129_01360 PF17200 Single Cache domain 2 FY129_01360 PF00672 HAMP domain FY129_01360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_01370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY129_01370 PF02843 Phosphoribosylglycinamide synthetase, C domain FY129_01370 PF02844 Phosphoribosylglycinamide synthetase, N domain FY129_01375 PF09371 Tex-like protein N-terminal domain FY129_01375 PF00575 S1 RNA binding domain FY129_01375 PF16921 Tex protein YqgF-like domain FY129_01375 PF17674 HHH domain FY129_01390 PF01040 UbiA prenyltransferase family FY129_01405 PF03466 LysR substrate binding domain FY129_01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_01415 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY129_01420 PF04452 RNA methyltransferase FY129_01425 PF01384 Phosphate transporter family FY129_01435 PF05116 Sucrose-6F-phosphate phosphohydrolase FY129_01440 PF00534 Glycosyl transferases group 1 FY129_01440 PF13439 Glycosyltransferase Family 4 FY129_01445 PF00392 Bacterial regulatory proteins, gntR family FY129_01445 PF07729 FCD domain FY129_01460 PF03466 LysR substrate binding domain FY129_01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_01465 PF02913 FAD linked oxidases, C-terminal domain FY129_01465 PF01565 FAD binding domain FY129_01470 PF01565 FAD binding domain FY129_01470 PF02913 FAD linked oxidases, C-terminal domain FY129_01475 PF13183 4Fe-4S dicluster domain FY129_01475 PF02754 Cysteine-rich domain FY129_01485 PF03734 L,D-transpeptidase catalytic domain FY129_01485 PF17969 L,D-transpeptidase C-terminal domain FY129_01490 PF03352 Methyladenine glycosylase FY129_01500 PF03601 Conserved hypothetical protein 698 FY129_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_01505 PF03466 LysR substrate binding domain FY129_01535 PF03129 Anticodon binding domain FY129_01535 PF13393 Histidyl-tRNA synthetase FY129_01545 PF13393 Histidyl-tRNA synthetase FY129_01550 PF01634 ATP phosphoribosyltransferase FY129_01555 PF07681 DoxX FY129_01565 PF00118 TCP-1/cpn60 chaperonin family FY129_01570 PF00166 Chaperonin 10 Kd subunit FY129_01580 PF06574 FAD synthetase FY129_01580 PF01687 Riboflavin kinase FY129_01585 PF08264 Anticodon-binding domain of tRNA FY129_01585 PF00133 tRNA synthetases class I (I, L, M and V) FY129_01595 PF14437 MafB19-like deaminase FY129_01600 PF01479 S4 domain FY129_01600 PF00849 RNA pseudouridylate synthase FY129_01610 PF01734 Patatin-like phospholipase FY129_01615 PF02254 TrkA-N domain FY129_01615 PF00999 Sodium/hydrogen exchanger family FY129_01620 PF01523 Putative modulator of DNA gyrase FY129_01625 PF00459 Inositol monophosphatase family FY129_01635 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY129_01635 PF00534 Glycosyl transferases group 1 FY129_01645 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY129_01655 PF08676 MutL C terminal dimerisation domain FY129_01655 PF01119 DNA mismatch repair protein, C-terminal domain FY129_01660 PF00486 Transcriptional regulatory protein, C terminal FY129_01660 PF00072 Response regulator receiver domain FY129_01665 PF00990 Diguanylate cyclase, GGDEF domain FY129_01665 PF00563 EAL domain FY129_01665 PF13188 PAS domain FY129_01665 PF03707 Bacterial signalling protein N terminal repeat FY129_01670 PF08450 SMP-30/Gluconolactonase/LRE-like region FY129_01675 PF01081 KDPG and KHG aldolase FY129_01680 PF05035 2-keto-3-deoxy-galactonokinase FY129_01690 PF01614 Bacterial transcriptional regulator FY129_01690 PF09339 IclR helix-turn-helix domain FY129_01695 PF03472 Autoinducer binding domain FY129_01695 PF00196 Bacterial regulatory proteins, luxR family FY129_01705 PF10609 NUBPL iron-transfer P-loop NTPase FY129_01710 PF01544 CorA-like Mg2+ transporter protein FY129_01715 PF02705 K+ potassium transporter FY129_01730 PF00119 ATP synthase A chain FY129_01735 PF00137 ATP synthase subunit C FY129_01740 PF00430 ATP synthase B/B' CF(0) FY129_01745 PF00430 ATP synthase B/B' CF(0) FY129_01750 PF09828 Chromate resistance exported protein FY129_01755 PF02417 Chromate transporter FY129_01760 PF01351 Ribonuclease HII FY129_01775 PF01565 FAD binding domain FY129_01775 PF02913 FAD linked oxidases, C-terminal domain FY129_01780 PF01300 Telomere recombination FY129_01780 PF03481 Putative GTP-binding controlling metal-binding FY129_01790 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY129_01790 PF00355 Rieske [2Fe-2S] domain FY129_01795 PF00111 2Fe-2S iron-sulfur cluster binding domain FY129_01795 PF00970 Oxidoreductase FAD-binding domain FY129_01795 PF00175 Oxidoreductase NAD-binding domain FY129_01800 PF07886 BA14K-like protein FY129_01805 PF07886 BA14K-like protein FY129_01815 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY129_01815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_01815 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_01815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_01830 PF05958 tRNA (Uracil-5-)-methyltransferase FY129_01835 PF01479 S4 domain FY129_01835 PF01728 FtsJ-like methyltransferase FY129_01840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_01840 PF02203 Tar ligand binding domain homologue FY129_01840 PF00672 HAMP domain FY129_01850 PF13404 AsnC-type helix-turn-helix domain FY129_01850 PF01037 Lrp/AsnC ligand binding domain FY129_01875 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY129_01875 PF02779 Transketolase, pyrimidine binding domain FY129_01875 PF02780 Transketolase, C-terminal domain FY129_01880 PF02678 Pirin FY129_01880 PF05726 Pirin C-terminal cupin domain FY129_01885 PF02609 Exonuclease VII small subunit FY129_01890 PF00850 Histone deacetylase domain FY129_01895 PF02632 BioY family FY129_01900 PF02361 Cobalt transport protein FY129_01905 PF00005 ABC transporter FY129_01910 PF06224 Winged helix DNA-binding domain FY129_01915 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY129_01915 PF00925 GTP cyclohydrolase II FY129_01920 PF01264 Chorismate synthase FY129_01935 PF00300 Histidine phosphatase superfamily (branch 1) FY129_01945 PF00684 DnaJ central domain FY129_01945 PF01556 DnaJ C terminal domain FY129_01945 PF00226 DnaJ domain FY129_01955 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY129_01955 PF01243 Pyridoxamine 5'-phosphate oxidase FY129_01975 PF13419 Haloacid dehalogenase-like hydrolase FY129_01985 PF01523 Putative modulator of DNA gyrase FY129_01995 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY129_01995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY129_02000 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY129_02005 PF01040 UbiA prenyltransferase family FY129_02010 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY129_02015 PF00510 Cytochrome c oxidase subunit III FY129_02025 PF02104 SURF1 family FY129_02030 PF02401 LytB protein FY129_02035 PF01636 Phosphotransferase enzyme family FY129_02040 PF00075 RNase H FY129_02050 PF00462 Glutaredoxin FY129_02050 PF08534 Redoxin FY129_02060 PF02622 Uncharacterized ACR, COG1678 FY129_02065 PF05532 CsbD-like FY129_02070 PF15887 Putative zinc-binding metallo-peptidase FY129_02070 PF10005 zinc-ribbon domain FY129_02075 PF13188 PAS domain FY129_02075 PF03707 Bacterial signalling protein N terminal repeat FY129_02075 PF00563 EAL domain FY129_02075 PF00990 Diguanylate cyclase, GGDEF domain FY129_02080 PF13302 Acetyltransferase (GNAT) domain FY129_02085 PF00675 Insulinase (Peptidase family M16) FY129_02085 PF05193 Peptidase M16 inactive domain FY129_02090 PF00291 Pyridoxal-phosphate dependent enzyme FY129_02090 PF14821 Threonine synthase N terminus FY129_02110 PF13419 Haloacid dehalogenase-like hydrolase FY129_02115 PF00392 Bacterial regulatory proteins, gntR family FY129_02115 PF07729 FCD domain FY129_02130 PF18755 Restriction Enzyme Adenine Methylase Associated FY129_02130 PF01555 DNA methylase FY129_02135 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY129_02140 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY129_02150 PF14815 NUDIX domain FY129_02150 PF00730 HhH-GPD superfamily base excision DNA repair protein FY129_02165 PF13462 Thioredoxin FY129_02170 PF02463 RecF/RecN/SMC N terminal domain FY129_02175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_02180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY129_02180 PF02896 PEP-utilising enzyme, TIM barrel domain FY129_02180 PF00391 PEP-utilising enzyme, mobile domain FY129_02190 PF03232 Ubiquinone biosynthesis protein COQ7 FY129_02195 PF00375 Sodium:dicarboxylate symporter family FY129_02225 PF06039 Malate:quinone oxidoreductase (Mqo) FY129_02250 PF00009 Elongation factor Tu GTP binding domain FY129_02255 PF01507 Phosphoadenosine phosphosulfate reductase family FY129_02260 PF01507 Phosphoadenosine phosphosulfate reductase family FY129_02265 PF02082 Transcriptional regulator FY129_02280 PF00528 Binding-protein-dependent transport system inner membrane component FY129_02285 PF00005 ABC transporter FY129_02285 PF12857 TOBE-like domain FY129_02290 PF14765 Polyketide synthase dehydratase FY129_02290 PF00550 Phosphopantetheine attachment site FY129_02290 PF08659 KR domain FY129_02290 PF02801 Beta-ketoacyl synthase, C-terminal domain FY129_02290 PF00107 Zinc-binding dehydrogenase FY129_02290 PF08240 Alcohol dehydrogenase GroES-like domain FY129_02290 PF00698 Acyl transferase domain FY129_02290 PF16197 Ketoacyl-synthetase C-terminal extension FY129_02290 PF00109 Beta-ketoacyl synthase, N-terminal domain FY129_02295 PF00563 EAL domain FY129_02295 PF01590 GAF domain FY129_02295 PF00990 Diguanylate cyclase, GGDEF domain FY129_02295 PF00989 PAS fold FY129_02305 PF13977 BetI-type transcriptional repressor, C-terminal FY129_02305 PF00440 Bacterial regulatory proteins, tetR family FY129_02310 PF00171 Aldehyde dehydrogenase family FY129_02315 PF05199 GMC oxidoreductase FY129_02315 PF00732 GMC oxidoreductase FY129_02345 PF02798 Glutathione S-transferase, N-terminal domain FY129_02345 PF00043 Glutathione S-transferase, C-terminal domain FY129_02355 PF07690 Major Facilitator Superfamily FY129_02365 PF05973 Phage derived protein Gp49-like (DUF891) FY129_02375 PF04679 ATP dependent DNA ligase C terminal region FY129_02375 PF01068 ATP dependent DNA ligase domain FY129_02375 PF04675 DNA ligase N terminus FY129_02385 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY129_02390 PF00403 Heavy-metal-associated domain FY129_02395 PF03734 L,D-transpeptidase catalytic domain FY129_02395 PF17969 L,D-transpeptidase C-terminal domain FY129_02400 PF03734 L,D-transpeptidase catalytic domain FY129_02400 PF17969 L,D-transpeptidase C-terminal domain FY129_02405 PF01047 MarR family FY129_02410 PF02566 OsmC-like protein FY129_02425 PF00005 ABC transporter FY129_02425 PF16326 ABC transporter C-terminal domain FY129_02425 PF12848 ABC transporter FY129_02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_02455 PF03466 LysR substrate binding domain FY129_02460 PF00106 short chain dehydrogenase FY129_02475 PF05872 Bacterial protein of unknown function (DUF853) FY129_02485 PF01638 HxlR-like helix-turn-helix FY129_02490 PF00106 short chain dehydrogenase FY129_02495 PF12833 Helix-turn-helix domain FY129_02505 PF00248 Aldo/keto reductase family FY129_02510 PF01062 Bestrophin, RFP-TM, chloride channel FY129_02530 PF01063 Amino-transferase class IV FY129_02535 PF00672 HAMP domain FY129_02535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_02535 PF02203 Tar ligand binding domain homologue FY129_02540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_02540 PF03466 LysR substrate binding domain FY129_02555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY129_02555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY129_02570 PF01810 LysE type translocator FY129_02575 PF01322 Cytochrome C' FY129_02580 PF00034 Cytochrome c FY129_02610 PF09278 MerR, DNA binding FY129_02610 PF00376 MerR family regulatory protein FY129_02620 PF02583 Metal-sensitive transcriptional repressor FY129_02635 PF00005 ABC transporter FY129_02635 PF00571 CBS domain FY129_02640 PF00528 Binding-protein-dependent transport system inner membrane component FY129_02650 PF00326 Prolyl oligopeptidase family FY129_02650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY129_02660 PF00701 Dihydrodipicolinate synthetase family FY129_02670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY129_02670 PF02805 Metal binding domain of Ada FY129_02670 PF12833 Helix-turn-helix domain FY129_02670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY129_02675 PF01594 AI-2E family transporter FY129_02680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_02695 PF03006 Haemolysin-III related FY129_02705 PF01810 LysE type translocator FY129_02710 PF01641 SelR domain FY129_02715 PF13244 Domain of unknown function (DUF4040) FY129_02715 PF00361 Proton-conducting membrane transporter FY129_02715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY129_02720 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY129_02725 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY129_02730 PF00361 Proton-conducting membrane transporter FY129_02735 PF01899 Na+/H+ ion antiporter subunit FY129_02740 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY129_02745 PF03334 Na+/H+ antiporter subunit FY129_02750 PF05443 ROS/MUCR transcriptional regulator protein FY129_02765 PF02657 Fe-S metabolism associated domain FY129_02770 PF17264 Family of unknown function (DUF5330) FY129_02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_02775 PF00512 His Kinase A (phospho-acceptor) domain FY129_02810 PF01810 LysE type translocator FY129_02815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_02815 PF03466 LysR substrate binding domain FY129_02820 PF00912 Transglycosylase FY129_02820 PF00905 Penicillin binding protein transpeptidase domain FY129_02825 PF03692 Putative zinc- or iron-chelating domain FY129_02830 PF00905 Penicillin binding protein transpeptidase domain FY129_02840 PF00403 Heavy-metal-associated domain FY129_02845 PF09278 MerR, DNA binding FY129_02845 PF00376 MerR family regulatory protein FY129_02870 PF07690 Major Facilitator Superfamily FY129_02875 PF08244 Glycosyl hydrolases family 32 C terminal FY129_02875 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY129_02880 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY129_02890 PF01037 Lrp/AsnC ligand binding domain FY129_02890 PF13404 AsnC-type helix-turn-helix domain FY129_02930 PF04860 Phage portal protein FY129_03020 PF00486 Transcriptional regulatory protein, C terminal FY129_03020 PF00072 Response regulator receiver domain FY129_03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_03040 PF03100 CcmE FY129_03045 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY129_03045 PF01578 Cytochrome C assembly protein FY129_03050 PF03918 Cytochrome C biogenesis protein FY129_03055 PF13180 PDZ domain FY129_03060 PF00486 Transcriptional regulatory protein, C terminal FY129_03060 PF00072 Response regulator receiver domain FY129_03065 PF00512 His Kinase A (phospho-acceptor) domain FY129_03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_03065 PF00672 HAMP domain FY129_03070 PF04134 Protein of unknown function, DUF393 FY129_03075 PF06629 MltA-interacting protein MipA FY129_03080 PF08335 GlnD PII-uridylyltransferase FY129_03080 PF03710 Glutamate-ammonia ligase adenylyltransferase FY129_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_03085 PF00512 His Kinase A (phospho-acceptor) domain FY129_03085 PF00989 PAS fold FY129_03095 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY129_03095 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY129_03095 PF01433 Peptidase family M1 domain FY129_03100 PF00892 EamA-like transporter family FY129_03115 PF00012 Hsp70 protein FY129_03120 PF00990 Diguanylate cyclase, GGDEF domain FY129_03150 PF08240 Alcohol dehydrogenase GroES-like domain FY129_03150 PF00107 Zinc-binding dehydrogenase FY129_03155 PF01638 HxlR-like helix-turn-helix FY129_03160 PF02673 Bacitracin resistance protein BacA FY129_03165 PF03448 MgtE intracellular N domain FY129_03165 PF01769 Divalent cation transporter FY129_03165 PF00571 CBS domain FY129_03170 PF07690 Major Facilitator Superfamily FY129_03175 PF00781 Diacylglycerol kinase catalytic domain FY129_03180 PF00202 Aminotransferase class-III FY129_03195 PF01048 Phosphorylase superfamily FY129_03195 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY129_03220 PF00155 Aminotransferase class I and II FY129_03230 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_03230 PF14759 Reductase C-terminal FY129_03235 PF03328 HpcH/HpaI aldolase/citrate lyase family FY129_03375 PF02530 Porin subfamily FY129_03380 PF02530 Porin subfamily FY129_03385 PF01464 Transglycosylase SLT domain FY129_03385 PF14718 Soluble lytic murein transglycosylase L domain FY129_03390 PF00701 Dihydrodipicolinate synthetase family FY129_03395 PF01668 SmpB protein FY129_03400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_03400 PF00672 HAMP domain FY129_03400 PF02203 Tar ligand binding domain homologue FY129_03410 PF01192 RNA polymerase Rpb6 FY129_03415 PF13291 ACT domain FY129_03415 PF04607 Region found in RelA / SpoT proteins FY129_03415 PF02824 TGS domain FY129_03430 PF01648 4'-phosphopantetheinyl transferase superfamily FY129_03435 PF10502 Signal peptidase, peptidase S26 FY129_03440 PF00035 Double-stranded RNA binding motif FY129_03440 PF14622 Ribonuclease-III-like FY129_03445 PF01926 50S ribosome-binding GTPase FY129_03445 PF07650 KH domain FY129_03455 PF00072 Response regulator receiver domain FY129_03460 PF11967 Recombination protein O N terminal FY129_03460 PF02565 Recombination protein O C terminal FY129_03465 PF07690 Major Facilitator Superfamily FY129_03470 PF08241 Methyltransferase domain FY129_03480 PF01966 HD domain FY129_03490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_03500 PF00005 ABC transporter FY129_03505 PF00528 Binding-protein-dependent transport system inner membrane component FY129_03510 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY129_03515 PF05552 Conserved TM helix FY129_03515 PF00924 Mechanosensitive ion channel FY129_03525 PF01966 HD domain FY129_03530 PF01571 Aminomethyltransferase folate-binding domain FY129_03550 PF00293 NUDIX domain FY129_03555 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY129_03565 PF00072 Response regulator receiver domain FY129_03565 PF00990 Diguanylate cyclase, GGDEF domain FY129_03570 PF01066 CDP-alcohol phosphatidyltransferase FY129_03575 PF02666 Phosphatidylserine decarboxylase FY129_03580 PF00005 ABC transporter FY129_03580 PF00664 ABC transporter transmembrane region FY129_03590 PF03641 Possible lysine decarboxylase FY129_03595 PF00905 Penicillin binding protein transpeptidase domain FY129_03595 PF03717 Penicillin-binding Protein dimerisation domain FY129_03600 PF00892 EamA-like transporter family FY129_03605 PF00561 alpha/beta hydrolase fold FY129_03620 PF04480 Protein of unknown function (DUF559) FY129_03625 PF09190 DALR domain FY129_03625 PF01406 tRNA synthetases class I (C) catalytic domain FY129_03630 PF00106 short chain dehydrogenase FY129_03635 PF00156 Phosphoribosyl transferase domain FY129_03635 PF13537 Glutamine amidotransferase domain FY129_03640 PF02674 Colicin V production protein FY129_03645 PF18073 Rubredoxin metal binding domain FY129_03645 PF06745 KaiC FY129_03660 PF01168 Alanine racemase, N-terminal domain FY129_03660 PF00842 Alanine racemase, C-terminal domain FY129_03665 PF12852 Cupin FY129_03665 PF12833 Helix-turn-helix domain FY129_03670 PF03591 AzlC protein FY129_03680 PF03796 DnaB-like helicase C terminal domain FY129_03680 PF00772 DnaB-like helicase N terminal domain FY129_03695 PF13533 Biotin-lipoyl like FY129_03700 PF01281 Ribosomal protein L9, N-terminal domain FY129_03700 PF03948 Ribosomal protein L9, C-terminal domain FY129_03710 PF01084 Ribosomal protein S18 FY129_03715 PF01250 Ribosomal protein S6 FY129_03725 PF00248 Aldo/keto reductase family FY129_03730 PF00698 Acyl transferase domain FY129_03740 PF00550 Phosphopantetheine attachment site FY129_03745 PF02801 Beta-ketoacyl synthase, C-terminal domain FY129_03745 PF00109 Beta-ketoacyl synthase, N-terminal domain FY129_03755 PF02618 YceG-like family FY129_03760 PF08340 Domain of unknown function (DUF1732) FY129_03760 PF03755 YicC-like family, N-terminal region FY129_03765 PF00625 Guanylate kinase FY129_03780 PF00398 Ribosomal RNA adenine dimethylase FY129_03785 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY129_03795 PF04453 LPS transport system D FY129_03795 PF03968 OstA-like protein FY129_03810 PF00883 Cytosol aminopeptidase family, catalytic domain FY129_03810 PF02789 Cytosol aminopeptidase family, N-terminal domain FY129_03820 PF03707 Bacterial signalling protein N terminal repeat FY129_03820 PF00990 Diguanylate cyclase, GGDEF domain FY129_03820 PF00563 EAL domain FY129_03825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_03830 PF00563 EAL domain FY129_03830 PF01590 GAF domain FY129_03830 PF00990 Diguanylate cyclase, GGDEF domain FY129_03830 PF00360 Phytochrome region FY129_03835 PF00563 EAL domain FY129_03835 PF00990 Diguanylate cyclase, GGDEF domain FY129_03835 PF03707 Bacterial signalling protein N terminal repeat FY129_03840 PF00989 PAS fold FY129_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_03840 PF00512 His Kinase A (phospho-acceptor) domain FY129_03845 PF00196 Bacterial regulatory proteins, luxR family FY129_03845 PF00072 Response regulator receiver domain FY129_03855 PF12848 ABC transporter FY129_03855 PF00005 ABC transporter FY129_03860 PF17158 Membrane-associated sensor, integral membrane domain FY129_03860 PF00990 Diguanylate cyclase, GGDEF domain FY129_03865 PF13417 Glutathione S-transferase, N-terminal domain FY129_03870 PF00334 Nucleoside diphosphate kinase FY129_03890 PF02391 MoaE protein FY129_03900 PF01066 CDP-alcohol phosphatidyltransferase FY129_03905 PF08459 UvrC Helix-hairpin-helix N-terminal FY129_03905 PF01541 GIY-YIG catalytic domain FY129_03905 PF02151 UvrB/uvrC motif FY129_03915 PF13505 Outer membrane protein beta-barrel domain FY129_03925 PF00445 Ribonuclease T2 family FY129_03935 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY129_03940 PF01568 Molydopterin dinucleotide binding domain FY129_03940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY129_03940 PF00384 Molybdopterin oxidoreductase FY129_03945 PF00293 NUDIX domain FY129_03965 PF00551 Formyl transferase FY129_03970 PF00586 AIR synthase related protein, N-terminal domain FY129_03970 PF02769 AIR synthase related protein, C-terminal domain FY129_03975 PF01209 ubiE/COQ5 methyltransferase family FY129_03980 PF01594 AI-2E family transporter FY129_03990 PF13089 Polyphosphate kinase N-terminal domain FY129_03990 PF17941 Polyphosphate kinase C-terminal domain 1 FY129_03990 PF13090 Polyphosphate kinase C-terminal domain 2 FY129_03990 PF02503 Polyphosphate kinase middle domain FY129_03995 PF02541 Ppx/GppA phosphatase family FY129_04020 PF00211 Adenylate and Guanylate cyclase catalytic domain FY129_04030 PF01612 3'-5' exonuclease FY129_04030 PF00570 HRDC domain FY129_04035 PF07690 Major Facilitator Superfamily FY129_04040 PF00152 tRNA synthetases class II (D, K and N) FY129_04040 PF02938 GAD domain FY129_04040 PF01336 OB-fold nucleic acid binding domain FY129_04050 PF00672 HAMP domain FY129_04050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_04050 PF02203 Tar ligand binding domain homologue FY129_04055 PF01740 STAS domain FY129_04055 PF00916 Sulfate permease family FY129_04065 PF03989 DNA gyrase C-terminal domain, beta-propeller FY129_04065 PF00521 DNA gyrase/topoisomerase IV, subunit A FY129_04070 PF04376 Arginine-tRNA-protein transferase, N terminus FY129_04070 PF04377 Arginine-tRNA-protein transferase, C terminus FY129_04080 PF00490 Delta-aminolevulinic acid dehydratase FY129_04100 PF00464 Serine hydroxymethyltransferase FY129_04105 PF03477 ATP cone domain FY129_04110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY129_04110 PF01872 RibD C-terminal domain FY129_04115 PF00677 Lumazine binding domain FY129_04120 PF01810 LysE type translocator FY129_04125 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY129_04130 PF01029 NusB family FY129_04135 PF07690 Major Facilitator Superfamily FY129_04140 PF03030 Inorganic H+ pyrophosphatase FY129_04160 PF02504 Fatty acid synthesis protein FY129_04165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY129_04165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY129_04170 PF00216 Bacterial DNA-binding protein FY129_04175 PF13411 MerR HTH family regulatory protein FY129_04190 PF00403 Heavy-metal-associated domain FY129_04195 PF00111 2Fe-2S iron-sulfur cluster binding domain FY129_04195 PF00175 Oxidoreductase NAD-binding domain FY129_04195 PF00970 Oxidoreductase FAD-binding domain FY129_04200 PF09278 MerR, DNA binding FY129_04200 PF00376 MerR family regulatory protein FY129_04205 PF00528 Binding-protein-dependent transport system inner membrane component FY129_04210 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_04210 PF00528 Binding-protein-dependent transport system inner membrane component FY129_04215 PF00005 ABC transporter FY129_04215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_04220 PF00005 ABC transporter FY129_04220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_04225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_04235 PF02386 Cation transport protein FY129_04240 PF00291 Pyridoxal-phosphate dependent enzyme FY129_04240 PF00585 C-terminal regulatory domain of Threonine dehydratase FY129_04250 PF00990 Diguanylate cyclase, GGDEF domain FY129_04255 PF02525 Flavodoxin-like fold FY129_04260 PF03466 LysR substrate binding domain FY129_04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_04265 PF02872 5'-nucleotidase, C-terminal domain FY129_04265 PF00149 Calcineurin-like phosphoesterase FY129_04285 PF00581 Rhodanese-like domain FY129_04290 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY129_04290 PF02272 DHHA1 domain FY129_04290 PF01411 tRNA synthetases class II (A) FY129_04295 PF00291 Pyridoxal-phosphate dependent enzyme FY129_04295 PF00571 CBS domain FY129_04300 PF03441 FAD binding domain of DNA photolyase FY129_04300 PF00875 DNA photolyase FY129_04310 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY129_04310 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY129_04355 PF00712 DNA polymerase III beta subunit, N-terminal domain FY129_04355 PF02768 DNA polymerase III beta subunit, C-terminal domain FY129_04355 PF02767 DNA polymerase III beta subunit, central domain FY129_04425 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY129_04470 PF04860 Phage portal protein FY129_04630 PF02899 Phage integrase, N-terminal SAM-like domain FY129_04630 PF00589 Phage integrase family FY129_04645 PF06055 Exopolysaccharide synthesis, ExoD FY129_04650 PF09335 SNARE associated Golgi protein FY129_04695 PF02397 Bacterial sugar transferase FY129_04700 PF00534 Glycosyl transferases group 1 FY129_04725 PF02628 Cytochrome oxidase assembly protein FY129_04730 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY129_04735 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY129_04740 PF00491 Arginase family FY129_04745 PF00380 Ribosomal protein S9/S16 FY129_04750 PF00572 Ribosomal protein L13 FY129_04760 PF13380 CoA binding domain FY129_04765 PF01053 Cys/Met metabolism PLP-dependent enzyme FY129_04790 PF00067 Cytochrome P450 FY129_04795 PF00990 Diguanylate cyclase, GGDEF domain FY129_04800 PF00574 Clp protease FY129_04805 PF06689 ClpX C4-type zinc finger FY129_04805 PF10431 C-terminal, D2-small domain, of ClpB protein FY129_04805 PF07724 AAA domain (Cdc48 subfamily) FY129_04810 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY129_04810 PF00004 ATPase family associated with various cellular activities (AAA) FY129_04810 PF05362 Lon protease (S16) C-terminal proteolytic domain FY129_04815 PF00216 Bacterial DNA-binding protein FY129_04820 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY129_04840 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY129_04845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY129_04850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY129_04860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY129_04875 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY129_04875 PF10531 SLBB domain FY129_04875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY129_04880 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY129_04880 PF00384 Molybdopterin oxidoreductase FY129_04880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY129_04885 PF00146 NADH dehydrogenase FY129_04890 PF12838 4Fe-4S dicluster domain FY129_04895 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY129_04900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY129_04905 PF00361 Proton-conducting membrane transporter FY129_04905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY129_04910 PF00361 Proton-conducting membrane transporter FY129_04910 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY129_04915 PF00361 Proton-conducting membrane transporter FY129_04920 PF02237 Biotin protein ligase C terminal domain FY129_04920 PF03099 Biotin/lipoate A/B protein ligase family FY129_04920 PF08279 HTH domain FY129_04925 PF12706 Beta-lactamase superfamily domain FY129_04925 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY129_04925 PF17770 Ribonuclease J C-terminal domain FY129_04935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY129_04935 PF03129 Anticodon binding domain FY129_04940 PF12704 MacB-like periplasmic core domain FY129_04940 PF02687 FtsX-like permease family FY129_04945 PF00005 ABC transporter FY129_04950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY129_04950 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY129_04950 PF02811 PHP domain FY129_04950 PF14579 Helix-hairpin-helix motif FY129_04960 PF00817 impB/mucB/samB family FY129_04960 PF11799 impB/mucB/samB family C-terminal domain FY129_04980 PF00072 Response regulator receiver domain FY129_04985 PF00072 Response regulator receiver domain FY129_04985 PF00990 Diguanylate cyclase, GGDEF domain FY129_04990 PF00471 Ribosomal protein L33 FY129_04995 PF07690 Major Facilitator Superfamily FY129_05010 PF08461 Ribonuclease R winged-helix domain FY129_05010 PF08206 Ribonuclease B OB domain FY129_05010 PF00575 S1 RNA binding domain FY129_05010 PF00773 RNB domain FY129_05010 PF17876 Cold shock domain FY129_05015 PF01396 Topoisomerase DNA binding C4 zinc finger FY129_05015 PF13368 Topoisomerase C-terminal repeat FY129_05015 PF01751 Toprim domain FY129_05015 PF01131 DNA topoisomerase FY129_05025 PF17782 DprA winged helix domain FY129_05025 PF02481 DNA recombination-mediator protein A FY129_05030 PF02660 Glycerol-3-phosphate acyltransferase FY129_05035 PF01979 Amidohydrolase family FY129_05040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY129_05040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY129_05055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_05055 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_05055 PF18158 Adaptive response protein AidB N-terminal domain FY129_05060 PF00583 Acetyltransferase (GNAT) family FY129_05080 PF03652 Holliday junction resolvase FY129_05085 PF03831 PhnA domain FY129_05085 PF08274 PhnA Zinc-Ribbon FY129_05095 PF02686 Glu-tRNAGln amidotransferase C subunit FY129_05100 PF01425 Amidase FY129_05105 PF00583 Acetyltransferase (GNAT) family FY129_05105 PF13673 Acetyltransferase (GNAT) domain FY129_05110 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY129_05125 PF02637 GatB domain FY129_05125 PF02934 GatB/GatE catalytic domain FY129_05135 PF00583 Acetyltransferase (GNAT) family FY129_05155 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY129_05160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_05160 PF00289 Biotin carboxylase, N-terminal domain FY129_05160 PF02785 Biotin carboxylase C-terminal domain FY129_05165 PF00364 Biotin-requiring enzyme FY129_05170 PF01220 Dehydroquinase class II FY129_05180 PF00155 Aminotransferase class I and II FY129_05205 PF12111 Polyribonucleotide phosphorylase C terminal FY129_05205 PF10150 Ribonuclease E/G family FY129_05205 PF00575 S1 RNA binding domain FY129_05210 PF01520 N-acetylmuramoyl-L-alanine amidase FY129_05215 PF00905 Penicillin binding protein transpeptidase domain FY129_05215 PF17092 Penicillin-binding protein OB-like domain FY129_05215 PF00912 Transglycosylase FY129_05235 PF01513 ATP-NAD kinase FY129_05240 PF02567 Phenazine biosynthesis-like protein FY129_05245 PF00679 Elongation factor G C-terminus FY129_05245 PF03764 Elongation factor G, domain IV FY129_05245 PF00009 Elongation factor Tu GTP binding domain FY129_05260 PF00111 2Fe-2S iron-sulfur cluster binding domain FY129_05270 PF00809 Pterin binding enzyme FY129_05275 PF02152 Dihydroneopterin aldolase FY129_05280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY129_05290 PF05128 Domain of unknown function (DUF697) FY129_05295 PF04317 YcjX-like family, DUF463 FY129_05305 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY129_05320 PF00072 Response regulator receiver domain FY129_05320 PF13188 PAS domain FY129_05320 PF08448 PAS fold FY129_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_05320 PF00512 His Kinase A (phospho-acceptor) domain FY129_05325 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY129_05330 PF00004 ATPase family associated with various cellular activities (AAA) FY129_05330 PF07724 AAA domain (Cdc48 subfamily) FY129_05330 PF17871 AAA lid domain FY129_05330 PF02861 Clp amino terminal domain, pathogenicity island component FY129_05330 PF10431 C-terminal, D2-small domain, of ClpB protein FY129_05350 PF03466 LysR substrate binding domain FY129_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_05360 PF01230 HIT domain FY129_05385 PF00318 Ribosomal protein S2 FY129_05390 PF00889 Elongation factor TS FY129_05395 PF00696 Amino acid kinase family FY129_05400 PF01765 Ribosome recycling factor FY129_05405 PF01255 Putative undecaprenyl diphosphate synthase FY129_05415 PF17820 PDZ domain FY129_05415 PF02163 Peptidase family M50 FY129_05420 PF01103 Surface antigen FY129_05420 PF07244 Surface antigen variable number repeat FY129_05425 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_05425 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY129_05430 PF07977 FabA-like domain FY129_05435 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY129_05435 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_05440 PF06230 LpxI C-terminal domain FY129_05440 PF17930 LpxI N-terminal domain FY129_05445 PF02684 Lipid-A-disaccharide synthetase FY129_05450 PF00392 Bacterial regulatory proteins, gntR family FY129_05450 PF07729 FCD domain FY129_05455 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_05460 PF00528 Binding-protein-dependent transport system inner membrane component FY129_05465 PF00528 Binding-protein-dependent transport system inner membrane component FY129_05470 PF00005 ABC transporter FY129_05475 PF00285 Citrate synthase, C-terminal domain FY129_05490 PF01726 LexA DNA binding domain FY129_05490 PF00717 Peptidase S24-like FY129_05500 PF00793 DAHP synthetase I family FY129_05505 PF03952 Enolase, N-terminal domain FY129_05505 PF00113 Enolase, C-terminal TIM barrel domain FY129_05515 PF00676 Dehydrogenase E1 component FY129_05520 PF02779 Transketolase, pyrimidine binding domain FY129_05520 PF02780 Transketolase, C-terminal domain FY129_05520 PF00364 Biotin-requiring enzyme FY129_05525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY129_05525 PF00364 Biotin-requiring enzyme FY129_05525 PF02817 e3 binding domain FY129_05535 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_05535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY129_05545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY129_05545 PF04055 Radical SAM superfamily FY129_05550 PF00892 EamA-like transporter family FY129_05565 PF03364 Polyketide cyclase / dehydrase and lipid transport FY129_05570 PF02464 Competence-damaged protein FY129_05575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY129_05575 PF02542 YgbB family FY129_05580 PF01207 Dihydrouridine synthase (Dus) FY129_05585 PF00512 His Kinase A (phospho-acceptor) domain FY129_05585 PF00989 PAS fold FY129_05585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_05590 PF02954 Bacterial regulatory protein, Fis family FY129_05590 PF00072 Response regulator receiver domain FY129_05590 PF00158 Sigma-54 interaction domain FY129_05595 PF00672 HAMP domain FY129_05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_05595 PF00512 His Kinase A (phospho-acceptor) domain FY129_05595 PF00989 PAS fold FY129_05600 PF02954 Bacterial regulatory protein, Fis family FY129_05600 PF00072 Response regulator receiver domain FY129_05600 PF00158 Sigma-54 interaction domain FY129_05605 PF02080 TrkA-C domain FY129_05605 PF02254 TrkA-N domain FY129_05610 PF17209 Hfq protein FY129_05615 PF01926 50S ribosome-binding GTPase FY129_05615 PF13167 GTP-binding GTPase N-terminal FY129_05615 PF16360 GTP-binding GTPase Middle Region FY129_05620 PF03819 MazG nucleotide pyrophosphohydrolase domain FY129_05630 PF10414 Sirohaem synthase dimerisation region FY129_05630 PF14824 Sirohaem biosynthesis protein central FY129_05630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_05650 PF00970 Oxidoreductase FAD-binding domain FY129_05650 PF00175 Oxidoreductase NAD-binding domain FY129_05670 PF02347 Glycine cleavage system P-protein FY129_05675 PF01597 Glycine cleavage H-protein FY129_05680 PF01571 Aminomethyltransferase folate-binding domain FY129_05680 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY129_05705 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY129_05710 PF01479 S4 domain FY129_05710 PF00849 RNA pseudouridylate synthase FY129_05715 PF13419 Haloacid dehalogenase-like hydrolase FY129_05730 PF01042 Endoribonuclease L-PSP FY129_05735 PF00756 Putative esterase FY129_05745 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY129_05760 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY129_05760 PF00578 AhpC/TSA family FY129_05770 PF00043 Glutathione S-transferase, C-terminal domain FY129_05770 PF02798 Glutathione S-transferase, N-terminal domain FY129_05785 PF03358 NADPH-dependent FMN reductase FY129_05790 PF03960 ArsC family FY129_05795 PF01758 Sodium Bile acid symporter family FY129_05800 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY129_05810 PF00654 Voltage gated chloride channel FY129_05815 PF03099 Biotin/lipoate A/B protein ligase family FY129_05815 PF12706 Beta-lactamase superfamily domain FY129_05820 PF01026 TatD related DNase FY129_05825 PF08264 Anticodon-binding domain of tRNA FY129_05825 PF09334 tRNA synthetases class I (M) FY129_05830 PF09115 DNA polymerase III, delta subunit, C terminal FY129_05835 PF02223 Thymidylate kinase FY129_05840 PF07943 Penicillin-binding protein 5, C-terminal domain FY129_05840 PF00768 D-alanyl-D-alanine carboxypeptidase FY129_05845 PF05036 Sporulation related domain FY129_05845 PF03330 Lytic transglycolase FY129_05885 PF00521 DNA gyrase/topoisomerase IV, subunit A FY129_05885 PF03989 DNA gyrase C-terminal domain, beta-propeller FY129_05890 PF01914 MarC family integral membrane protein FY129_05895 PF00571 CBS domain FY129_05895 PF01743 Poly A polymerase head domain FY129_05905 PF00436 Single-strand binding protein family FY129_05910 PF17755 UvrA DNA-binding domain FY129_05910 PF17760 UvrA interaction domain FY129_05920 PF01207 Dihydrouridine synthase (Dus) FY129_05925 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY129_05930 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_05940 PF00950 ABC 3 transport family FY129_05945 PF00005 ABC transporter FY129_05950 PF01297 Zinc-uptake complex component A periplasmic FY129_05955 PF00356 Bacterial regulatory proteins, lacI family FY129_05965 PF00248 Aldo/keto reductase family FY129_05975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY129_05975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY129_05980 PF03597 Cytochrome oxidase maturation protein cbb3-type FY129_05990 PF05751 FixH FY129_05995 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY129_05995 PF12801 4Fe-4S binding domain FY129_05995 PF13746 4Fe-4S dicluster domain FY129_06015 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY129_06015 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY129_06030 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY129_06035 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY129_06055 PF09278 MerR, DNA binding FY129_06055 PF00376 MerR family regulatory protein FY129_06060 PF03448 MgtE intracellular N domain FY129_06060 PF00571 CBS domain FY129_06060 PF01769 Divalent cation transporter FY129_06065 PF00384 Molybdopterin oxidoreductase FY129_06075 PF01327 Polypeptide deformylase FY129_06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_06085 PF00989 PAS fold FY129_06085 PF00512 His Kinase A (phospho-acceptor) domain FY129_06095 PF03099 Biotin/lipoate A/B protein ligase family FY129_06100 PF00107 Zinc-binding dehydrogenase FY129_06100 PF08240 Alcohol dehydrogenase GroES-like domain FY129_06125 PF07549 SecD/SecF GG Motif FY129_06125 PF02355 Protein export membrane protein FY129_06130 PF02699 Preprotein translocase subunit FY129_06140 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY129_06140 PF08240 Alcohol dehydrogenase GroES-like domain FY129_06145 PF08360 QacR-like protein, C-terminal region FY129_06145 PF00440 Bacterial regulatory proteins, tetR family FY129_06150 PF00067 Cytochrome P450 FY129_06160 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_06160 PF06426 Serine acetyltransferase, N-terminal FY129_06165 PF00561 alpha/beta hydrolase fold FY129_06175 PF01494 FAD binding domain FY129_06180 PF01053 Cys/Met metabolism PLP-dependent enzyme FY129_06185 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_06190 PF00528 Binding-protein-dependent transport system inner membrane component FY129_06195 PF00528 Binding-protein-dependent transport system inner membrane component FY129_06200 PF00005 ABC transporter FY129_06215 PF17768 RecJ OB domain FY129_06215 PF02272 DHHA1 domain FY129_06215 PF01368 DHH family FY129_06225 PF00742 Homoserine dehydrogenase FY129_06225 PF03447 Homoserine dehydrogenase, NAD binding domain FY129_06225 PF01842 ACT domain FY129_06230 PF00155 Aminotransferase class I and II FY129_06235 PF01156 Inosine-uridine preferring nucleoside hydrolase FY129_06240 PF01925 Sulfite exporter TauE/SafE FY129_06255 PF08240 Alcohol dehydrogenase GroES-like domain FY129_06255 PF00107 Zinc-binding dehydrogenase FY129_06260 PF00109 Beta-ketoacyl synthase, N-terminal domain FY129_06260 PF02801 Beta-ketoacyl synthase, C-terminal domain FY129_06270 PF07977 FabA-like domain FY129_06275 PF00550 Phosphopantetheine attachment site FY129_06280 PF04055 Radical SAM superfamily FY129_06285 PF00027 Cyclic nucleotide-binding domain FY129_06285 PF13545 Crp-like helix-turn-helix domain FY129_06295 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY129_06300 PF03749 Sugar fermentation stimulation protein RE domain FY129_06300 PF17746 SfsA N-terminal OB domain FY129_06305 PF00557 Metallopeptidase family M24 FY129_06310 PF04002 RadC-like JAB domain FY129_06325 PF01474 Class-II DAHP synthetase family FY129_06340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY129_06340 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_06350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY129_06355 PF13419 Haloacid dehalogenase-like hydrolase FY129_06365 PF00206 Lyase FY129_06365 PF10415 Fumarase C C-terminus FY129_06375 PF00117 Glutamine amidotransferase class-I FY129_06375 PF06418 CTP synthase N-terminus FY129_06380 PF03840 Preprotein translocase SecG subunit FY129_06385 PF00121 Triosephosphate isomerase FY129_06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_06395 PF01751 Toprim domain FY129_06395 PF00986 DNA gyrase B subunit, carboxyl terminus FY129_06395 PF00204 DNA gyrase B FY129_06400 PF01370 NAD dependent epimerase/dehydratase family FY129_06405 PF00574 Clp protease FY129_06415 PF01022 Bacterial regulatory protein, arsR family FY129_06420 PF13091 PLD-like domain FY129_06425 PF00072 Response regulator receiver domain FY129_06430 PF01571 Aminomethyltransferase folate-binding domain FY129_06430 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY129_06430 PF01266 FAD dependent oxidoreductase FY129_06430 PF16350 FAD dependent oxidoreductase central domain FY129_06445 PF00924 Mechanosensitive ion channel FY129_06445 PF12795 Mechanosensitive ion channel porin domain FY129_06445 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY129_06505 PF00005 ABC transporter FY129_06510 PF02405 Permease MlaE FY129_06515 PF13378 Enolase C-terminal domain-like FY129_06515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_06525 PF01515 Phosphate acetyl/butaryl transferase FY129_06525 PF00390 Malic enzyme, N-terminal domain FY129_06525 PF03949 Malic enzyme, NAD binding domain FY129_06535 PF00881 Nitroreductase family FY129_06540 PF07676 WD40-like Beta Propeller Repeat FY129_06550 PF02540 NAD synthase FY129_06550 PF00795 Carbon-nitrogen hydrolase FY129_06555 PF00884 Sulfatase FY129_06565 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_06565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY129_06580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY129_06580 PF05698 Bacterial trigger factor protein (TF) C-terminus FY129_06580 PF05697 Bacterial trigger factor protein (TF) FY129_06600 PF01134 Glucose inhibited division protein A FY129_06620 PF08240 Alcohol dehydrogenase GroES-like domain FY129_06620 PF00107 Zinc-binding dehydrogenase FY129_06630 PF00550 Phosphopantetheine attachment site FY129_06635 PF13193 AMP-binding enzyme C-terminal domain FY129_06635 PF00501 AMP-binding enzyme FY129_06645 PF04715 Anthranilate synthase component I, N terminal region FY129_06645 PF00117 Glutamine amidotransferase class-I FY129_06645 PF00425 chorismate binding enzyme FY129_06650 PF01702 Queuine tRNA-ribosyltransferase FY129_06655 PF02547 Queuosine biosynthesis protein FY129_06660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY129_06665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY129_06670 PF01467 Cytidylyltransferase-like FY129_06685 PF02885 Glycosyl transferase family, helical bundle domain FY129_06685 PF00591 Glycosyl transferase family, a/b domain FY129_06690 PF00218 Indole-3-glycerol phosphate synthase FY129_06695 PF01967 MoaC family FY129_06700 PF00994 Probable molybdopterin binding domain FY129_06700 PF03454 MoeA C-terminal region (domain IV) FY129_06700 PF03453 MoeA N-terminal region (domain I and II) FY129_06705 PF00990 Diguanylate cyclase, GGDEF domain FY129_06705 PF17158 Membrane-associated sensor, integral membrane domain FY129_06715 PF00999 Sodium/hydrogen exchanger family FY129_06715 PF02254 TrkA-N domain FY129_06725 PF06463 Molybdenum Cofactor Synthesis C FY129_06725 PF04055 Radical SAM superfamily FY129_06735 PF07690 Major Facilitator Superfamily FY129_06740 PF12804 MobA-like NTP transferase domain FY129_06745 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY129_06750 PF01551 Peptidase family M23 FY129_06760 PF01975 Survival protein SurE FY129_06765 PF02403 Seryl-tRNA synthetase N-terminal domain FY129_06765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY129_06770 PF00902 Sec-independent protein translocase protein (TatC) FY129_06775 PF02416 mttA/Hcf106 family FY129_06780 PF02416 mttA/Hcf106 family FY129_06785 PF04079 Segregation and condensation complex subunit ScpB FY129_06790 PF02616 Segregation and condensation protein ScpA FY129_06795 PF00933 Glycosyl hydrolase family 3 N terminal domain FY129_06805 PF00750 tRNA synthetases class I (R) FY129_06805 PF03485 Arginyl tRNA synthetase N terminal domain FY129_06805 PF05746 DALR anticodon binding domain FY129_06810 PF01966 HD domain FY129_06810 PF13286 Phosphohydrolase-associated domain FY129_06815 PF01521 Iron-sulphur cluster biosynthesis FY129_06825 PF08238 Sel1 repeat FY129_06835 PF08264 Anticodon-binding domain of tRNA FY129_06835 PF00133 tRNA synthetases class I (I, L, M and V) FY129_06835 PF10458 Valyl tRNA synthetase tRNA binding arm FY129_06875 PF03358 NADPH-dependent FMN reductase FY129_06880 PF02464 Competence-damaged protein FY129_06880 PF18146 Damage-inducible protein CinA KH domain FY129_06880 PF00994 Probable molybdopterin binding domain FY129_06885 PF00582 Universal stress protein family FY129_06890 PF00156 Phosphoribosyl transferase domain FY129_06895 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY129_06895 PF02867 Ribonucleotide reductase, barrel domain FY129_06910 PF01566 Natural resistance-associated macrophage protein FY129_06920 PF00664 ABC transporter transmembrane region FY129_06920 PF00005 ABC transporter FY129_06925 PF01594 AI-2E family transporter FY129_06930 PF00583 Acetyltransferase (GNAT) family FY129_06960 PF03129 Anticodon binding domain FY129_06960 PF02824 TGS domain FY129_06960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY129_06960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY129_06970 PF01809 Putative membrane protein insertion efficiency factor FY129_06980 PF01227 GTP cyclohydrolase I FY129_06985 PF01502 Phosphoribosyl-AMP cyclohydrolase FY129_06990 PF01734 Patatin-like phospholipase FY129_07000 PF00571 CBS domain FY129_07000 PF00478 IMP dehydrogenase / GMP reductase domain FY129_07035 PF03315 Serine dehydratase beta chain FY129_07035 PF03313 Serine dehydratase alpha chain FY129_07075 PF03466 LysR substrate binding domain FY129_07075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_07085 PF01965 DJ-1/PfpI family FY129_07085 PF12833 Helix-turn-helix domain FY129_07090 PF01256 Carbohydrate kinase FY129_07090 PF03853 YjeF-related protein N-terminus FY129_07100 PF00543 Nitrogen regulatory protein P-II FY129_07105 PF00120 Glutamine synthetase, catalytic domain FY129_07105 PF03951 Glutamine synthetase, beta-Grasp domain FY129_07115 PF08755 Hemimethylated DNA-binding protein YccV like FY129_07125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_07135 PF00892 EamA-like transporter family FY129_07145 PF00270 DEAD/DEAH box helicase FY129_07145 PF17757 UvrB interaction domain FY129_07145 PF02559 CarD-like/TRCF domain FY129_07145 PF03461 TRCF domain FY129_07145 PF00271 Helicase conserved C-terminal domain FY129_07155 PF00270 DEAD/DEAH box helicase FY129_07155 PF17191 RecG wedge domain FY129_07155 PF00271 Helicase conserved C-terminal domain FY129_07170 PF01850 PIN domain FY129_07185 PF01380 SIS domain FY129_07190 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_07190 PF14602 Hexapeptide repeat of succinyl-transferase FY129_07190 PF12804 MobA-like NTP transferase domain FY129_07195 PF00392 Bacterial regulatory proteins, gntR family FY129_07195 PF07729 FCD domain FY129_07200 PF02608 ABC transporter substrate-binding protein PnrA-like FY129_07205 PF02653 Branched-chain amino acid transport system / permease component FY129_07210 PF02653 Branched-chain amino acid transport system / permease component FY129_07215 PF00005 ABC transporter FY129_07225 PF01494 FAD binding domain FY129_07230 PF03547 Membrane transport protein FY129_07235 PF02683 Cytochrome C biogenesis protein transmembrane region FY129_07255 PF00313 'Cold-shock' DNA-binding domain FY129_07310 PF00005 ABC transporter FY129_07310 PF02687 FtsX-like permease family FY129_07310 PF12704 MacB-like periplasmic core domain FY129_07315 PF00005 ABC transporter FY129_07315 PF02687 FtsX-like permease family FY129_07315 PF12704 MacB-like periplasmic core domain FY129_07335 PF01521 Iron-sulphur cluster biosynthesis FY129_07340 PF01883 Iron-sulfur cluster assembly protein FY129_07345 PF00266 Aminotransferase class-V FY129_07350 PF01458 Uncharacterized protein family (UPF0051) FY129_07355 PF00005 ABC transporter FY129_07360 PF01458 Uncharacterized protein family (UPF0051) FY129_07365 PF00266 Aminotransferase class-V FY129_07370 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY129_07375 PF03702 Anhydro-N-acetylmuramic acid kinase FY129_07380 PF00579 tRNA synthetases class I (W and Y) FY129_07390 PF00578 AhpC/TSA family FY129_07395 PF04305 Protein of unknown function (DUF455) FY129_07400 PF01476 LysM domain FY129_07400 PF08525 Opacity-associated protein A N-terminal motif FY129_07400 PF01551 Peptidase family M23 FY129_07405 PF00270 DEAD/DEAH box helicase FY129_07405 PF00271 Helicase conserved C-terminal domain FY129_07420 PF00834 Ribulose-phosphate 3 epimerase family FY129_07430 PF10397 Adenylosuccinate lyase C-terminus FY129_07430 PF00206 Lyase FY129_07440 PF01259 SAICAR synthetase FY129_07445 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY129_07465 PF00392 Bacterial regulatory proteins, gntR family FY129_07465 PF00155 Aminotransferase class I and II FY129_07470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY129_07470 PF02769 AIR synthase related protein, C-terminal domain FY129_07470 PF00586 AIR synthase related protein, N-terminal domain FY129_07495 PF00462 Glutaredoxin FY129_07500 PF07690 Major Facilitator Superfamily FY129_07505 PF00459 Inositol monophosphatase family FY129_07510 PF00459 Inositol monophosphatase family FY129_07515 PF01171 PP-loop family FY129_07520 PF04960 Glutaminase FY129_07525 PF01479 S4 domain FY129_07525 PF00163 Ribosomal protein S4/S9 N-terminal domain FY129_07530 PF03741 Integral membrane protein TerC family FY129_07540 PF00892 EamA-like transporter family FY129_07545 PF01810 LysE type translocator FY129_07555 PF01177 Asp/Glu/Hydantoin racemase FY129_07560 PF00588 SpoU rRNA Methylase family FY129_07570 PF00180 Isocitrate/isopropylmalate dehydrogenase FY129_07580 PF02272 DHHA1 domain FY129_07580 PF01411 tRNA synthetases class II (A) FY129_07580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY129_07585 PF00154 recA bacterial DNA recombination protein FY129_07590 PF00294 pfkB family carbohydrate kinase FY129_07595 PF04227 Indigoidine synthase A like protein FY129_07600 PF00691 OmpA family FY129_07600 PF01389 OmpA-like transmembrane domain FY129_07605 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_07610 PF00528 Binding-protein-dependent transport system inner membrane component FY129_07615 PF00528 Binding-protein-dependent transport system inner membrane component FY129_07620 PF06233 Usg-like family FY129_07625 PF08241 Methyltransferase domain FY129_07630 PF09084 NMT1/THI5 like FY129_07635 PF13404 AsnC-type helix-turn-helix domain FY129_07635 PF01037 Lrp/AsnC ligand binding domain FY129_07640 PF03167 Uracil DNA glycosylase superfamily FY129_07650 PF00989 PAS fold FY129_07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_07650 PF00512 His Kinase A (phospho-acceptor) domain FY129_07655 PF01219 Prokaryotic diacylglycerol kinase FY129_07660 PF02277 Phosphoribosyltransferase FY129_07665 PF02654 Cobalamin-5-phosphate synthase FY129_07680 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY129_07685 PF01061 ABC-2 type transporter FY129_07690 PF00005 ABC transporter FY129_07695 PF01925 Sulfite exporter TauE/SafE FY129_07705 PF08269 Cache domain FY129_07705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_07715 PF00004 ATPase family associated with various cellular activities (AAA) FY129_07715 PF16193 AAA C-terminal domain FY129_07715 PF12002 MgsA AAA+ ATPase C terminal FY129_07720 PF00595 PDZ domain FY129_07720 PF13180 PDZ domain FY129_07740 PF00920 Dehydratase family FY129_07745 PF00174 Oxidoreductase molybdopterin binding domain FY129_07750 PF01794 Ferric reductase like transmembrane component FY129_07760 PF05675 Protein of unknown function (DUF817) FY129_07765 PF01196 Ribosomal protein L17 FY129_07770 PF01000 RNA polymerase Rpb3/RpoA insert domain FY129_07770 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY129_07770 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY129_07775 PF00411 Ribosomal protein S11 FY129_07780 PF00416 Ribosomal protein S13/S18 FY129_07790 PF00344 SecY translocase FY129_07795 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY129_07800 PF00327 Ribosomal protein L30p/L7e FY129_07805 PF00333 Ribosomal protein S5, N-terminal domain FY129_07805 PF03719 Ribosomal protein S5, C-terminal domain FY129_07810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY129_07815 PF00347 Ribosomal protein L6 FY129_07820 PF00410 Ribosomal protein S8 FY129_07825 PF00253 Ribosomal protein S14p/S29e FY129_07830 PF00281 Ribosomal protein L5 FY129_07830 PF00673 ribosomal L5P family C-terminus FY129_07835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY129_07835 PF00467 KOW motif FY129_07840 PF00238 Ribosomal protein L14p/L23e FY129_07845 PF00366 Ribosomal protein S17 FY129_07850 PF00831 Ribosomal L29 protein FY129_07855 PF00252 Ribosomal protein L16p/L10e FY129_07860 PF07650 KH domain FY129_07860 PF00189 Ribosomal protein S3, C-terminal domain FY129_07865 PF00237 Ribosomal protein L22p/L17e FY129_07870 PF00203 Ribosomal protein S19 FY129_07875 PF00181 Ribosomal Proteins L2, RNA binding domain FY129_07875 PF03947 Ribosomal Proteins L2, C-terminal domain FY129_07880 PF00276 Ribosomal protein L23 FY129_07885 PF00573 Ribosomal protein L4/L1 family FY129_07890 PF00297 Ribosomal protein L3 FY129_07895 PF00338 Ribosomal protein S10p/S20e FY129_07900 PF00009 Elongation factor Tu GTP binding domain FY129_07900 PF03144 Elongation factor Tu domain 2 FY129_07900 PF03143 Elongation factor Tu C-terminal domain FY129_07905 PF00009 Elongation factor Tu GTP binding domain FY129_07905 PF03764 Elongation factor G, domain IV FY129_07905 PF03144 Elongation factor Tu domain 2 FY129_07905 PF00679 Elongation factor G C-terminus FY129_07905 PF14492 Elongation Factor G, domain II FY129_07910 PF00177 Ribosomal protein S7p/S5e FY129_07915 PF00164 Ribosomal protein S12/S23 FY129_07935 PF04998 RNA polymerase Rpb1, domain 5 FY129_07935 PF05000 RNA polymerase Rpb1, domain 4 FY129_07935 PF04983 RNA polymerase Rpb1, domain 3 FY129_07935 PF04997 RNA polymerase Rpb1, domain 1 FY129_07935 PF00623 RNA polymerase Rpb1, domain 2 FY129_07940 PF04563 RNA polymerase beta subunit FY129_07940 PF04561 RNA polymerase Rpb2, domain 2 FY129_07940 PF04565 RNA polymerase Rpb2, domain 3 FY129_07940 PF10385 RNA polymerase beta subunit external 1 domain FY129_07940 PF00562 RNA polymerase Rpb2, domain 6 FY129_07940 PF04560 RNA polymerase Rpb2, domain 7 FY129_07945 PF00542 Ribosomal protein L7/L12 C-terminal domain FY129_07945 PF16320 Ribosomal protein L7/L12 dimerisation domain FY129_07950 PF00466 Ribosomal protein L10 FY129_07955 PF00687 Ribosomal protein L1p/L10e family FY129_07960 PF00298 Ribosomal protein L11, RNA binding domain FY129_07960 PF03946 Ribosomal protein L11, N-terminal domain FY129_07965 PF00467 KOW motif FY129_07965 PF02357 Transcription termination factor nusG FY129_07970 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY129_07980 PF08485 Polysaccharide biosynthesis protein C-terminal FY129_07980 PF02719 Polysaccharide biosynthesis protein FY129_07985 PF03144 Elongation factor Tu domain 2 FY129_07985 PF03143 Elongation factor Tu C-terminal domain FY129_07985 PF00009 Elongation factor Tu GTP binding domain FY129_07990 PF03741 Integral membrane protein TerC family FY129_07995 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY129_08015 PF00664 ABC transporter transmembrane region FY129_08015 PF00005 ABC transporter FY129_08055 PF04542 Sigma-70 region 2 FY129_08055 PF04545 Sigma-70, region 4 FY129_08065 PF00158 Sigma-54 interaction domain FY129_08065 PF02954 Bacterial regulatory protein, Fis family FY129_08065 PF00072 Response regulator receiver domain FY129_08070 PF08769 Sporulation initiation factor Spo0A C terminal FY129_08070 PF00072 Response regulator receiver domain FY129_08075 PF00512 His Kinase A (phospho-acceptor) domain FY129_08075 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_08075 PF00072 Response regulator receiver domain FY129_08075 PF01627 Hpt domain FY129_08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_08080 PF00072 Response regulator receiver domain FY129_08085 PF13426 PAS domain FY129_08085 PF08447 PAS fold FY129_08085 PF07536 HWE histidine kinase FY129_08090 PF00072 Response regulator receiver domain FY129_08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_08095 PF00512 His Kinase A (phospho-acceptor) domain FY129_08095 PF08446 PAS fold FY129_08095 PF00360 Phytochrome region FY129_08095 PF01590 GAF domain FY129_08110 PF00588 SpoU rRNA Methylase family FY129_08110 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY129_08115 PF03061 Thioesterase superfamily FY129_08135 PF13460 NAD(P)H-binding FY129_08140 PF01638 HxlR-like helix-turn-helix FY129_08155 PF00271 Helicase conserved C-terminal domain FY129_08155 PF04851 Type III restriction enzyme, res subunit FY129_08155 PF02151 UvrB/uvrC motif FY129_08155 PF12344 Ultra-violet resistance protein B FY129_08155 PF17757 UvrB interaction domain FY129_08165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY129_08165 PF00756 Putative esterase FY129_08185 PF00226 DnaJ domain FY129_08185 PF01556 DnaJ C terminal domain FY129_08185 PF00684 DnaJ central domain FY129_08205 PF17151 Periplasmic sensor domain FY129_08205 PF00990 Diguanylate cyclase, GGDEF domain FY129_08215 PF00005 ABC transporter FY129_08215 PF08402 TOBE domain FY129_08225 PF01547 Bacterial extracellular solute-binding protein FY129_08230 PF00155 Aminotransferase class I and II FY129_08245 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY129_08245 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY129_08250 PF00440 Bacterial regulatory proteins, tetR family FY129_08255 PF06719 AraC-type transcriptional regulator N-terminus FY129_08255 PF12833 Helix-turn-helix domain FY129_08260 PF08240 Alcohol dehydrogenase GroES-like domain FY129_08260 PF00107 Zinc-binding dehydrogenase FY129_08265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_08270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY129_08275 PF00196 Bacterial regulatory proteins, luxR family FY129_08275 PF03472 Autoinducer binding domain FY129_08280 PF14490 Helix-hairpin-helix containing domain FY129_08280 PF13538 UvrD-like helicase C-terminal domain FY129_08280 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY129_08300 PF04542 Sigma-70 region 2 FY129_08300 PF08281 Sigma-70, region 4 FY129_08315 PF00248 Aldo/keto reductase family FY129_08330 PF10369 Small subunit of acetolactate synthase FY129_08335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY129_08335 PF00205 Thiamine pyrophosphate enzyme, central domain FY129_08335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY129_08355 PF13302 Acetyltransferase (GNAT) domain FY129_08365 PF13180 PDZ domain FY129_08370 PF01145 SPFH domain / Band 7 family FY129_08375 PF01145 SPFH domain / Band 7 family FY129_08380 PF00186 Dihydrofolate reductase FY129_08385 PF00303 Thymidylate synthase FY129_08420 PF02913 FAD linked oxidases, C-terminal domain FY129_08420 PF01565 FAD binding domain FY129_08425 PF00873 AcrB/AcrD/AcrF family FY129_08430 PF13533 Biotin-lipoyl like FY129_08440 PF00580 UvrD/REP helicase N-terminal domain FY129_08440 PF13361 UvrD-like helicase C-terminal domain FY129_08465 PF00857 Isochorismatase family FY129_08485 PF01321 Creatinase/Prolidase N-terminal domain FY129_08485 PF00557 Metallopeptidase family M24 FY129_08495 PF02630 SCO1/SenC FY129_08505 PF01584 CheW-like domain FY129_08515 PF00929 Exonuclease FY129_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_08520 PF03466 LysR substrate binding domain FY129_08530 PF00583 Acetyltransferase (GNAT) family FY129_08535 PF01636 Phosphotransferase enzyme family FY129_08540 PF03120 NAD-dependent DNA ligase OB-fold domain FY129_08540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY129_08540 PF12826 Helix-hairpin-helix motif FY129_08540 PF00533 BRCA1 C Terminus (BRCT) domain FY129_08540 PF01653 NAD-dependent DNA ligase adenylation domain FY129_08545 PF02463 RecF/RecN/SMC N terminal domain FY129_08550 PF13525 Outer membrane lipoprotein FY129_08555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY129_08560 PF00091 Tubulin/FtsZ family, GTPase domain FY129_08560 PF12327 FtsZ family, C-terminal domain FY129_08565 PF02491 SHS2 domain inserted in FTSA FY129_08570 PF03799 Cell division protein FtsQ FY129_08570 PF08478 POTRA domain, FtsQ-type FY129_08575 PF07478 D-ala D-ala ligase C-terminus FY129_08575 PF01820 D-ala D-ala ligase N-terminus FY129_08580 PF07690 Major Facilitator Superfamily FY129_08580 PF00083 Sugar (and other) transporter FY129_08585 PF00990 Diguanylate cyclase, GGDEF domain FY129_08585 PF00563 EAL domain FY129_08585 PF03707 Bacterial signalling protein N terminal repeat FY129_08590 PF01565 FAD binding domain FY129_08590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY129_08595 PF08245 Mur ligase middle domain FY129_08595 PF02875 Mur ligase family, glutamate ligase domain FY129_08595 PF01225 Mur ligase family, catalytic domain FY129_08600 PF03033 Glycosyltransferase family 28 N-terminal domain FY129_08600 PF04101 Glycosyltransferase family 28 C-terminal domain FY129_08605 PF01098 Cell cycle protein FY129_08610 PF02875 Mur ligase family, glutamate ligase domain FY129_08610 PF08245 Mur ligase middle domain FY129_08615 PF00953 Glycosyl transferase family 4 FY129_08615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY129_08620 PF01225 Mur ligase family, catalytic domain FY129_08620 PF02875 Mur ligase family, glutamate ligase domain FY129_08620 PF08245 Mur ligase middle domain FY129_08625 PF01225 Mur ligase family, catalytic domain FY129_08625 PF02875 Mur ligase family, glutamate ligase domain FY129_08625 PF08245 Mur ligase middle domain FY129_08630 PF00905 Penicillin binding protein transpeptidase domain FY129_08630 PF03717 Penicillin-binding Protein dimerisation domain FY129_08640 PF01795 MraW methylase family FY129_08645 PF02381 MraZ protein, putative antitoxin-like FY129_08670 PF01510 N-acetylmuramoyl-L-alanine amidase FY129_08675 PF05099 Tellurite resistance protein TerB FY129_08675 PF00226 DnaJ domain FY129_08680 PF00365 Phosphofructokinase FY129_08700 PF13649 Methyltransferase domain FY129_08705 PF01183 Glycosyl hydrolases family 25 FY129_08715 PF02219 Methylenetetrahydrofolate reductase FY129_08720 PF01209 ubiE/COQ5 methyltransferase family FY129_08725 PF00005 ABC transporter FY129_08725 PF12848 ABC transporter FY129_08730 PF12146 Serine aminopeptidase, S33 FY129_08735 PF02515 CoA-transferase family III FY129_08740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY129_08740 PF00205 Thiamine pyrophosphate enzyme, central domain FY129_08740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY129_08750 PF01042 Endoribonuclease L-PSP FY129_08765 PF03734 L,D-transpeptidase catalytic domain FY129_08765 PF01476 LysM domain FY129_08770 PF07690 Major Facilitator Superfamily FY129_08790 PF10609 NUBPL iron-transfer P-loop NTPase FY129_08795 PF00465 Iron-containing alcohol dehydrogenase FY129_08800 PF00171 Aldehyde dehydrogenase family FY129_08805 PF03951 Glutamine synthetase, beta-Grasp domain FY129_08805 PF00120 Glutamine synthetase, catalytic domain FY129_08810 PF13520 Amino acid permease FY129_08820 PF01418 Helix-turn-helix domain, rpiR family FY129_08820 PF01380 SIS domain FY129_08825 PF13416 Bacterial extracellular solute-binding protein FY129_08840 PF00005 ABC transporter FY129_08840 PF08402 TOBE domain FY129_08845 PF08240 Alcohol dehydrogenase GroES-like domain FY129_08845 PF00107 Zinc-binding dehydrogenase FY129_08860 PF07690 Major Facilitator Superfamily FY129_08865 PF02310 B12 binding domain FY129_08865 PF02607 B12 binding domain FY129_08865 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY129_08865 PF02574 Homocysteine S-methyltransferase FY129_08865 PF00809 Pterin binding enzyme FY129_08885 PF13505 Outer membrane protein beta-barrel domain FY129_08900 PF04402 Protein of unknown function (DUF541) FY129_08910 PF01894 Uncharacterised protein family UPF0047 FY129_08915 PF01590 GAF domain FY129_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_08915 PF00512 His Kinase A (phospho-acceptor) domain FY129_08915 PF08446 PAS fold FY129_08915 PF00360 Phytochrome region FY129_08925 PF04545 Sigma-70, region 4 FY129_08925 PF04542 Sigma-70 region 2 FY129_08925 PF04546 Sigma-70, non-essential region FY129_08925 PF00140 Sigma-70 factor, region 1.2 FY129_08925 PF03979 Sigma-70 factor, region 1.1 FY129_08925 PF04539 Sigma-70 region 3 FY129_08930 PF10410 DnaB-helicase binding domain of primase FY129_08930 PF08278 DNA primase DnaG DnaB-binding FY129_08930 PF08275 DNA primase catalytic core, N-terminal domain FY129_08930 PF01807 CHC2 zinc finger FY129_08955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY129_08955 PF00117 Glutamine amidotransferase class-I FY129_08960 PF01554 MatE FY129_08965 PF00672 HAMP domain FY129_08965 PF02743 Cache domain FY129_08965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_08975 PF04228 Putative neutral zinc metallopeptidase FY129_08990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY129_08990 PF02142 MGS-like domain FY129_08990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_09000 PF00990 Diguanylate cyclase, GGDEF domain FY129_09000 PF07694 5TMR of 5TMR-LYT FY129_09015 PF03449 Transcription elongation factor, N-terminal FY129_09015 PF01272 Transcription elongation factor, GreA/GreB, C-term FY129_09020 PF00534 Glycosyl transferases group 1 FY129_09025 PF01037 Lrp/AsnC ligand binding domain FY129_09030 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_09035 PF03466 LysR substrate binding domain FY129_09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_09045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY129_09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_09060 PF03466 LysR substrate binding domain FY129_09070 PF01699 Sodium/calcium exchanger protein FY129_09075 PF00155 Aminotransferase class I and II FY129_09080 PF00563 EAL domain FY129_09080 PF05231 MASE1 FY129_09095 PF00313 'Cold-shock' DNA-binding domain FY129_09100 PF00753 Metallo-beta-lactamase superfamily FY129_09110 PF12802 MarR family FY129_09115 PF00486 Transcriptional regulatory protein, C terminal FY129_09115 PF00072 Response regulator receiver domain FY129_09120 PF00512 His Kinase A (phospho-acceptor) domain FY129_09120 PF00672 HAMP domain FY129_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_09125 PF01588 Putative tRNA binding domain FY129_09130 PF03807 NADP oxidoreductase coenzyme F420-dependent FY129_09130 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY129_09145 PF01790 Prolipoprotein diacylglyceryl transferase FY129_09155 PF02578 Multi-copper polyphenol oxidoreductase laccase FY129_09170 PF14572 Phosphoribosyl synthetase-associated domain FY129_09170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY129_09180 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY129_09190 PF00535 Glycosyl transferase family 2 FY129_09195 PF00672 HAMP domain FY129_09195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_09195 PF02203 Tar ligand binding domain homologue FY129_09200 PF00171 Aldehyde dehydrogenase family FY129_09205 PF02954 Bacterial regulatory protein, Fis family FY129_09210 PF00563 EAL domain FY129_09210 PF00990 Diguanylate cyclase, GGDEF domain FY129_09210 PF03707 Bacterial signalling protein N terminal repeat FY129_09210 PF13188 PAS domain FY129_09215 PF01386 Ribosomal L25p family FY129_09215 PF14693 Ribosomal protein TL5, C-terminal domain FY129_09220 PF00990 Diguanylate cyclase, GGDEF domain FY129_09220 PF08448 PAS fold FY129_09220 PF08447 PAS fold FY129_09220 PF00563 EAL domain FY129_09230 PF01195 Peptidyl-tRNA hydrolase FY129_09240 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY129_09245 PF06071 Protein of unknown function (DUF933) FY129_09245 PF01926 50S ribosome-binding GTPase FY129_09265 PF00156 Phosphoribosyl transferase domain FY129_09275 PF00033 Cytochrome b/b6/petB FY129_09275 PF00032 Cytochrome b(C-terminal)/b6/petD FY129_09275 PF02167 Cytochrome C1 family FY129_09280 PF00032 Cytochrome b(C-terminal)/b6/petD FY129_09280 PF00033 Cytochrome b/b6/petB FY129_09285 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY129_09285 PF00355 Rieske [2Fe-2S] domain FY129_09295 PF00664 ABC transporter transmembrane region FY129_09295 PF00005 ABC transporter FY129_09300 PF00005 ABC transporter FY129_09300 PF00664 ABC transporter transmembrane region FY129_09310 PF00588 SpoU rRNA Methylase family FY129_09315 PF02690 Na+/Pi-cotransporter FY129_09325 PF01218 Coproporphyrinogen III oxidase FY129_09340 PF13735 tRNA nucleotidyltransferase domain 2 putative FY129_09340 PF01743 Poly A polymerase head domain FY129_09340 PF12627 Probable RNA and SrmB- binding site of polymerase A FY129_09345 PF00293 NUDIX domain FY129_09355 PF17863 AAA lid domain FY129_09355 PF07726 ATPase family associated with various cellular activities (AAA) FY129_09375 PF00583 Acetyltransferase (GNAT) family FY129_09380 PF03466 LysR substrate binding domain FY129_09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_09390 PF07690 Major Facilitator Superfamily FY129_09400 PF13409 Glutathione S-transferase, N-terminal domain FY129_09405 PF00293 NUDIX domain FY129_09415 PF00682 HMGL-like FY129_09415 PF08502 LeuA allosteric (dimerisation) domain FY129_09420 PF03594 Benzoate membrane transport protein FY129_09435 PF04542 Sigma-70 region 2 FY129_09435 PF04545 Sigma-70, region 4 FY129_09445 PF00574 Clp protease FY129_09450 PF04955 HupE / UreJ protein FY129_09460 PF14489 QueF-like protein FY129_09465 PF01545 Cation efflux family FY129_09465 PF16916 Dimerisation domain of Zinc Transporter FY129_09475 PF13458 Periplasmic binding protein FY129_09485 PF01022 Bacterial regulatory protein, arsR family FY129_09490 PF00571 CBS domain FY129_09490 PF00005 ABC transporter FY129_09495 PF00528 Binding-protein-dependent transport system inner membrane component FY129_09500 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY129_09510 PF00265 Thymidine kinase FY129_09515 PF00127 Copper binding proteins, plastocyanin/azurin family FY129_09525 PF03472 Autoinducer binding domain FY129_09525 PF00196 Bacterial regulatory proteins, luxR family FY129_09530 PF03350 Uncharacterized protein family, UPF0114 FY129_09535 PF00593 TonB dependent receptor FY129_09535 PF07715 TonB-dependent Receptor Plug Domain FY129_09535 PF04886 PT repeat FY129_09545 PF00425 chorismate binding enzyme FY129_09545 PF00117 Glutamine amidotransferase class-I FY129_09545 PF04715 Anthranilate synthase component I, N terminal region FY129_09555 PF11871 Domain of unknown function (DUF3391) FY129_09555 PF01966 HD domain FY129_09560 PF13382 Adenine deaminase C-terminal domain FY129_09560 PF01979 Amidohydrolase family FY129_09565 PF00583 Acetyltransferase (GNAT) family FY129_09570 PF00128 Alpha amylase, catalytic domain FY129_09575 PF00294 pfkB family carbohydrate kinase FY129_09595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY129_09595 PF01926 50S ribosome-binding GTPase FY129_09615 PF05992 SbmA/BacA-like family FY129_09625 PF00557 Metallopeptidase family M24 FY129_09640 PF01799 [2Fe-2S] binding domain FY129_09640 PF00111 2Fe-2S iron-sulfur cluster binding domain FY129_09645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY129_09645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY129_09655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_09655 PF03466 LysR substrate binding domain FY129_09670 PF01979 Amidohydrolase family FY129_09680 PF01070 FMN-dependent dehydrogenase FY129_09685 PF00893 Small Multidrug Resistance protein FY129_09690 PF00440 Bacterial regulatory proteins, tetR family FY129_09690 PF17932 Tetracyclin repressor-like, C-terminal domain FY129_09695 PF07943 Penicillin-binding protein 5, C-terminal domain FY129_09695 PF00768 D-alanyl-D-alanine carboxypeptidase FY129_09705 PF00576 HIUase/Transthyretin family FY129_09710 PF04115 Ureidoglycolate lyase FY129_09725 PF09349 OHCU decarboxylase FY129_09725 PF01014 Uricase FY129_09735 PF06299 Protein of unknown function (DUF1045) FY129_09740 PF01266 FAD dependent oxidoreductase FY129_09745 PF01266 FAD dependent oxidoreductase FY129_09745 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY129_09750 PF00672 HAMP domain FY129_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_09750 PF00512 His Kinase A (phospho-acceptor) domain FY129_09750 PF01627 Hpt domain FY129_09750 PF00072 Response regulator receiver domain FY129_09750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY129_09755 PF00270 DEAD/DEAH box helicase FY129_09755 PF00271 Helicase conserved C-terminal domain FY129_09765 PF07681 DoxX FY129_09770 PF01476 LysM domain FY129_09770 PF03734 L,D-transpeptidase catalytic domain FY129_09780 PF14403 Circularly permuted ATP-grasp type 2 FY129_09790 PF08379 Bacterial transglutaminase-like N-terminal region FY129_09790 PF01841 Transglutaminase-like superfamily FY129_09815 PF02653 Branched-chain amino acid transport system / permease component FY129_09820 PF00005 ABC transporter FY129_09825 PF13407 Periplasmic binding protein domain FY129_09830 PF03466 LysR substrate binding domain FY129_09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_09860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_09860 PF00672 HAMP domain FY129_09865 PF07690 Major Facilitator Superfamily FY129_09875 PF02574 Homocysteine S-methyltransferase FY129_09875 PF00809 Pterin binding enzyme FY129_09875 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY129_09875 PF02607 B12 binding domain FY129_09875 PF02310 B12 binding domain FY129_09880 PF00528 Binding-protein-dependent transport system inner membrane component FY129_09885 PF00528 Binding-protein-dependent transport system inner membrane component FY129_09890 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_09895 PF00005 ABC transporter FY129_09915 PF00331 Glycosyl hydrolase family 10 FY129_09920 PF00535 Glycosyl transferase family 2 FY129_09935 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY129_09950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY129_09950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY129_09950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY129_09950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY129_09965 PF01152 Bacterial-like globin FY129_09985 PF08362 YcdC-like protein, C-terminal region FY129_09985 PF00440 Bacterial regulatory proteins, tetR family FY129_09990 PF01546 Peptidase family M20/M25/M40 FY129_09990 PF07687 Peptidase dimerisation domain FY129_09995 PF01979 Amidohydrolase family FY129_10000 PF00293 NUDIX domain FY129_10005 PF00005 ABC transporter FY129_10010 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10015 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10030 PF00873 AcrB/AcrD/AcrF family FY129_10045 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY129_10050 PF01730 UreF FY129_10055 PF02814 UreE urease accessory protein, N-terminal domain FY129_10055 PF05194 UreE urease accessory protein, C-terminal domain FY129_10060 PF08534 Redoxin FY129_10070 PF01979 Amidohydrolase family FY129_10070 PF00449 Urease alpha-subunit, N-terminal domain FY129_10080 PF07007 Lysozyme inhibitor LprI FY129_10090 PF00699 Urease beta subunit FY129_10095 PF06906 Protein of unknown function (DUF1272) FY129_10100 PF00547 Urease, gamma subunit FY129_10105 PF01774 UreD urease accessory protein FY129_10115 PF00005 ABC transporter FY129_10120 PF00005 ABC transporter FY129_10120 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_10130 PF02653 Branched-chain amino acid transport system / permease component FY129_10140 PF10931 Protein of unknown function (DUF2735) FY129_10145 PF03951 Glutamine synthetase, beta-Grasp domain FY129_10145 PF00120 Glutamine synthetase, catalytic domain FY129_10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_10155 PF00512 His Kinase A (phospho-acceptor) domain FY129_10155 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY129_10155 PF01627 Hpt domain FY129_10155 PF00989 PAS fold FY129_10155 PF00072 Response regulator receiver domain FY129_10160 PF00072 Response regulator receiver domain FY129_10170 PF01522 Polysaccharide deacetylase FY129_10170 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY129_10175 PF13458 Periplasmic binding protein FY129_10185 PF00005 ABC transporter FY129_10190 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_10190 PF00005 ABC transporter FY129_10195 PF11862 Domain of unknown function (DUF3382) FY129_10195 PF02653 Branched-chain amino acid transport system / permease component FY129_10200 PF02653 Branched-chain amino acid transport system / permease component FY129_10205 PF00459 Inositol monophosphatase family FY129_10235 PF00072 Response regulator receiver domain FY129_10235 PF00486 Transcriptional regulatory protein, C terminal FY129_10255 PF10090 Histidine phosphotransferase C-terminal domain FY129_10270 PF00588 SpoU rRNA Methylase family FY129_10280 PF00849 RNA pseudouridylate synthase FY129_10290 PF04545 Sigma-70, region 4 FY129_10290 PF00140 Sigma-70 factor, region 1.2 FY129_10290 PF04542 Sigma-70 region 2 FY129_10300 PF00709 Adenylosuccinate synthetase FY129_10325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_10335 PF03167 Uracil DNA glycosylase superfamily FY129_10340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_10345 PF04304 Protein of unknown function (DUF454) FY129_10350 PF00005 ABC transporter FY129_10355 PF01032 FecCD transport family FY129_10360 PF01497 Periplasmic binding protein FY129_10370 PF06228 Haem utilisation ChuX/HutX FY129_10385 PF13443 Cro/C1-type HTH DNA-binding domain FY129_10395 PF00551 Formyl transferase FY129_10400 PF05973 Phage derived protein Gp49-like (DUF891) FY129_10410 PF00672 HAMP domain FY129_10410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_10410 PF00512 His Kinase A (phospho-acceptor) domain FY129_10415 PF00072 Response regulator receiver domain FY129_10415 PF00486 Transcriptional regulatory protein, C terminal FY129_10425 PF03401 Tripartite tricarboxylate transporter family receptor FY129_10435 PF01970 Tripartite tricarboxylate transporter TctA family FY129_10450 PF01032 FecCD transport family FY129_10455 PF01032 FecCD transport family FY129_10460 PF00005 ABC transporter FY129_10465 PF00210 Ferritin-like domain FY129_10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_10480 PF00672 HAMP domain FY129_10485 PF00248 Aldo/keto reductase family FY129_10490 PF07690 Major Facilitator Superfamily FY129_10495 PF03466 LysR substrate binding domain FY129_10495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_10500 PF03466 LysR substrate binding domain FY129_10505 PF07859 alpha/beta hydrolase fold FY129_10510 PF13533 Biotin-lipoyl like FY129_10515 PF00873 AcrB/AcrD/AcrF family FY129_10530 PF13396 Phospholipase_D-nuclease N-terminal FY129_10530 PF13091 PLD-like domain FY129_10535 PF08543 Phosphomethylpyrimidine kinase FY129_10540 PF00484 Carbonic anhydrase FY129_10550 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY129_10550 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY129_10560 PF00083 Sugar (and other) transporter FY129_10565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY129_10565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY129_10565 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY129_10570 PF02233 NAD(P) transhydrogenase beta subunit FY129_10575 PF01613 Flavin reductase like domain FY129_10580 PF00881 Nitroreductase family FY129_10585 PF00561 alpha/beta hydrolase fold FY129_10590 PF01042 Endoribonuclease L-PSP FY129_10595 PF00857 Isochorismatase family FY129_10600 PF00296 Luciferase-like monooxygenase FY129_10605 PF01126 Heme oxygenase FY129_10610 PF00701 Dihydrodipicolinate synthetase family FY129_10615 PF07729 FCD domain FY129_10615 PF00392 Bacterial regulatory proteins, gntR family FY129_10625 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10630 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10635 PF03459 TOBE domain FY129_10635 PF17912 MalK OB fold domain FY129_10635 PF00005 ABC transporter FY129_10640 PF00294 pfkB family carbohydrate kinase FY129_10645 PF03576 Peptidase family S58 FY129_10650 PF01063 Amino-transferase class IV FY129_10655 PF03466 LysR substrate binding domain FY129_10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_10660 PF00144 Beta-lactamase FY129_10665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_10665 PF00005 ABC transporter FY129_10670 PF00005 ABC transporter FY129_10670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_10675 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10675 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_10680 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_10690 PF01244 Membrane dipeptidase (Peptidase family M19) FY129_10700 PF09924 Uncharacterised conserved protein (DUF2156) FY129_10700 PF03706 Lysylphosphatidylglycerol synthase TM region FY129_10715 PF07690 Major Facilitator Superfamily FY129_10725 PF04444 Catechol dioxygenase N terminus FY129_10725 PF00775 Dioxygenase FY129_10730 PF00465 Iron-containing alcohol dehydrogenase FY129_10735 PF04909 Amidohydrolase FY129_10740 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY129_10740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_10745 PF01613 Flavin reductase like domain FY129_10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_10765 PF00512 His Kinase A (phospho-acceptor) domain FY129_10770 PF00486 Transcriptional regulatory protein, C terminal FY129_10770 PF00072 Response regulator receiver domain FY129_10780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY129_10785 PF08402 TOBE domain FY129_10785 PF00005 ABC transporter FY129_10790 PF00528 Binding-protein-dependent transport system inner membrane component FY129_10805 PF00072 Response regulator receiver domain FY129_10805 PF00486 Transcriptional regulatory protein, C terminal FY129_10810 PF00072 Response regulator receiver domain FY129_10810 PF13188 PAS domain FY129_10810 PF08448 PAS fold FY129_10810 PF00512 His Kinase A (phospho-acceptor) domain FY129_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_10815 PF00202 Aminotransferase class-III FY129_10820 PF03466 LysR substrate binding domain FY129_10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_10825 PF00313 'Cold-shock' DNA-binding domain FY129_10845 PF13361 UvrD-like helicase C-terminal domain FY129_10845 PF00580 UvrD/REP helicase N-terminal domain FY129_10875 PF00199 Catalase FY129_10885 PF00106 short chain dehydrogenase FY129_10890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_10905 PF00924 Mechanosensitive ion channel FY129_10940 PF06772 Bacterial low temperature requirement A protein (LtrA) FY129_10950 PF00924 Mechanosensitive ion channel FY129_10960 PF00171 Aldehyde dehydrogenase family FY129_10965 PF00106 short chain dehydrogenase FY129_11035 PF03458 UPF0126 domain FY129_11040 PF17843 MycE methyltransferase N-terminal FY129_11050 PF00535 Glycosyl transferase family 2 FY129_11080 PF03895 YadA-like membrane anchor domain FY129_11080 PF05658 Head domain of trimeric autotransporter adhesin FY129_11080 PF05662 Coiled stalk of trimeric autotransporter adhesin FY129_11090 PF02954 Bacterial regulatory protein, Fis family FY129_11090 PF00158 Sigma-54 interaction domain FY129_11095 PF05231 MASE1 FY129_11095 PF00563 EAL domain FY129_11110 PF01613 Flavin reductase like domain FY129_11140 PF00004 ATPase family associated with various cellular activities (AAA) FY129_11140 PF17862 AAA+ lid domain FY129_11140 PF01434 Peptidase family M41 FY129_11145 PF00004 ATPase family associated with various cellular activities (AAA) FY129_11145 PF01434 Peptidase family M41 FY129_11145 PF06480 FtsH Extracellular FY129_11145 PF17862 AAA+ lid domain FY129_11210 PF01259 SAICAR synthetase FY129_11215 PF00440 Bacterial regulatory proteins, tetR family FY129_11220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_11220 PF00529 HlyD membrane-fusion protein of T1SS FY129_11225 PF00873 AcrB/AcrD/AcrF family FY129_11230 PF02321 Outer membrane efflux protein FY129_11235 PF09285 Elongation factor P, C-terminal FY129_11235 PF01132 Elongation factor P (EF-P) OB domain FY129_11235 PF08207 Elongation factor P (EF-P) KOW-like domain FY129_11240 PF00152 tRNA synthetases class II (D, K and N) FY129_11245 PF04055 Radical SAM superfamily FY129_11245 PF12544 Lysine-2,3-aminomutase FY129_11260 PF03466 LysR substrate binding domain FY129_11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_11265 PF01266 FAD dependent oxidoreductase FY129_11275 PF00528 Binding-protein-dependent transport system inner membrane component FY129_11280 PF00005 ABC transporter FY129_11280 PF03459 TOBE domain FY129_11290 PF03576 Peptidase family S58 FY129_11295 PF05690 Thiazole biosynthesis protein ThiG FY129_11305 PF01266 FAD dependent oxidoreductase FY129_11310 PF01964 Radical SAM ThiC family FY129_11310 PF13667 ThiC-associated domain FY129_11320 PF00550 Phosphopantetheine attachment site FY129_11350 PF00005 ABC transporter FY129_11350 PF00664 ABC transporter transmembrane region FY129_11355 PF13545 Crp-like helix-turn-helix domain FY129_11355 PF00027 Cyclic nucleotide-binding domain FY129_11365 PF00211 Adenylate and Guanylate cyclase catalytic domain FY129_11365 PF00672 HAMP domain FY129_11375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY129_11375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY129_11375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY129_11380 PF13439 Glycosyltransferase Family 4 FY129_11380 PF00534 Glycosyl transferases group 1 FY129_11395 PF00005 ABC transporter FY129_11395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_11400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_11405 PF00528 Binding-protein-dependent transport system inner membrane component FY129_11410 PF00528 Binding-protein-dependent transport system inner membrane component FY129_11410 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_11420 PF00534 Glycosyl transferases group 1 FY129_11420 PF13439 Glycosyltransferase Family 4 FY129_11425 PF04101 Glycosyltransferase family 28 C-terminal domain FY129_11425 PF03033 Glycosyltransferase family 28 N-terminal domain FY129_11430 PF03932 CutC family FY129_11435 PF07690 Major Facilitator Superfamily FY129_11445 PF02838 Glycosyl hydrolase family 20, domain 2 FY129_11445 PF00728 Glycosyl hydrolase family 20, catalytic domain FY129_11455 PF01418 Helix-turn-helix domain, rpiR family FY129_11455 PF01380 SIS domain FY129_11465 PF17912 MalK OB fold domain FY129_11465 PF00005 ABC transporter FY129_11470 PF01547 Bacterial extracellular solute-binding protein FY129_11475 PF00528 Binding-protein-dependent transport system inner membrane component FY129_11480 PF00528 Binding-protein-dependent transport system inner membrane component FY129_11490 PF07702 UTRA domain FY129_11490 PF00392 Bacterial regulatory proteins, gntR family FY129_11495 PF01380 SIS domain FY129_11500 PF01979 Amidohydrolase family FY129_11505 PF00480 ROK family FY129_11510 PF01494 FAD binding domain FY129_11515 PF01569 PAP2 superfamily FY129_11520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY129_11520 PF13288 DXP reductoisomerase C-terminal domain FY129_11520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY129_11525 PF00155 Aminotransferase class I and II FY129_11535 PF01103 Surface antigen FY129_11535 PF07244 Surface antigen variable number repeat FY129_11535 PF17243 POTRA domain TamA domain 1 FY129_11545 PF01584 CheW-like domain FY129_11550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_11550 PF08447 PAS fold FY129_11550 PF13426 PAS domain FY129_11555 PF02634 FdhD/NarQ family FY129_11560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY129_11565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY129_11565 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY129_11570 PF00231 ATP synthase FY129_11575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY129_11575 PF00306 ATP synthase alpha/beta chain, C terminal domain FY129_11575 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY129_11580 PF00213 ATP synthase delta (OSCP) subunit FY129_11590 PF00270 DEAD/DEAH box helicase FY129_11590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY129_11590 PF18074 Primosomal protein N C-terminal domain FY129_11590 PF17764 3′ DNA-binding domain (3′BD) FY129_11595 PF02899 Phage integrase, N-terminal SAM-like domain FY129_11595 PF00589 Phage integrase family FY129_11615 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_11615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY129_11620 PF01810 LysE type translocator FY129_11630 PF02817 e3 binding domain FY129_11630 PF00364 Biotin-requiring enzyme FY129_11630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY129_11635 PF16870 2-oxoglutarate dehydrogenase C-terminal FY129_11635 PF02779 Transketolase, pyrimidine binding domain FY129_11635 PF16078 2-oxoglutarate dehydrogenase N-terminus FY129_11635 PF00676 Dehydrogenase E1 component FY129_11640 PF02629 CoA binding domain FY129_11640 PF00549 CoA-ligase FY129_11645 PF08442 ATP-grasp domain FY129_11645 PF00549 CoA-ligase FY129_11650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY129_11650 PF00056 lactate/malate dehydrogenase, NAD binding domain FY129_11655 PF03969 AFG1-like ATPase FY129_11660 PF02974 Protease inhibitor Inh FY129_11665 PF13085 2Fe-2S iron-sulfur cluster binding domain FY129_11665 PF13237 4Fe-4S dicluster domain FY129_11670 PF00890 FAD binding domain FY129_11670 PF02910 Fumarate reductase flavoprotein C-term FY129_11680 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY129_11705 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY129_11705 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY129_11710 PF00814 Glycoprotease family FY129_11715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY129_11715 PF03900 Porphobilinogen deaminase, C-terminal domain FY129_11740 PF00117 Glutamine amidotransferase class-I FY129_11750 PF02325 YGGT family FY129_11755 PF02594 Uncharacterised ACR, YggU family COG1872 FY129_11760 PF00719 Inorganic pyrophosphatase FY129_11770 PF03144 Elongation factor Tu domain 2 FY129_11770 PF00679 Elongation factor G C-terminus FY129_11770 PF00009 Elongation factor Tu GTP binding domain FY129_11775 PF01432 Peptidase family M3 FY129_11780 PF01047 MarR family FY129_11785 PF07690 Major Facilitator Superfamily FY129_11790 PF00764 Arginosuccinate synthase FY129_11795 PF00106 short chain dehydrogenase FY129_11800 PF01810 LysE type translocator FY129_11805 PF00005 ABC transporter FY129_11810 PF02653 Branched-chain amino acid transport system / permease component FY129_11820 PF04055 Radical SAM superfamily FY129_11835 PF01329 Pterin 4 alpha carbinolamine dehydratase FY129_11840 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY129_11845 PF02834 LigT like Phosphoesterase FY129_11850 PF13472 GDSL-like Lipase/Acylhydrolase family FY129_11855 PF00005 ABC transporter FY129_11865 PF01027 Inhibitor of apoptosis-promoting Bax1 FY129_11880 PF00330 Aconitase family (aconitate hydratase) FY129_11880 PF00694 Aconitase C-terminal domain FY129_11885 PF00005 ABC transporter FY129_11890 PF03379 CcmB protein FY129_11895 PF01578 Cytochrome C assembly protein FY129_11905 PF08534 Redoxin FY129_11910 PF00990 Diguanylate cyclase, GGDEF domain FY129_11915 PF10755 Protein of unknown function (DUF2585) FY129_11920 PF04279 Intracellular septation protein A FY129_11925 PF00448 SRP54-type protein, GTPase domain FY129_11925 PF02881 SRP54-type protein, helical bundle domain FY129_11930 PF04055 Radical SAM superfamily FY129_11930 PF00919 Uncharacterized protein family UPF0004 FY129_11935 PF01678 Diaminopimelate epimerase FY129_11940 PF12706 Beta-lactamase superfamily domain FY129_11950 PF02978 Signal peptide binding domain FY129_11950 PF02881 SRP54-type protein, helical bundle domain FY129_11950 PF00448 SRP54-type protein, GTPase domain FY129_11955 PF01817 Chorismate mutase type II FY129_11955 PF02153 Prephenate dehydrogenase FY129_11960 PF00886 Ribosomal protein S16 FY129_11965 PF05239 PRC-barrel domain FY129_11965 PF01782 RimM N-terminal domain FY129_11970 PF01746 tRNA (Guanine-1)-methyltransferase FY129_11980 PF01245 Ribosomal protein L19 FY129_11985 PF00664 ABC transporter transmembrane region FY129_11985 PF00005 ABC transporter FY129_11990 PF00529 HlyD membrane-fusion protein of T1SS FY129_11990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_12000 PF07690 Major Facilitator Superfamily FY129_12005 PF00330 Aconitase family (aconitate hydratase) FY129_12020 PF01435 Peptidase family M48 FY129_12025 PF00005 ABC transporter FY129_12030 PF00528 Binding-protein-dependent transport system inner membrane component FY129_12035 PF01547 Bacterial extracellular solute-binding protein FY129_12045 PF16326 ABC transporter C-terminal domain FY129_12045 PF00005 ABC transporter FY129_12055 PF04204 Homoserine O-succinyltransferase FY129_12060 PF01263 Aldose 1-epimerase FY129_12065 PF00912 Transglycosylase FY129_12070 PF00348 Polyprenyl synthetase FY129_12075 PF13488 Glycine zipper FY129_12075 PF00691 OmpA family FY129_12080 PF04551 GcpE protein FY129_12085 PF07690 Major Facilitator Superfamily FY129_12090 PF00455 DeoR C terminal sensor domain FY129_12090 PF08220 DeoR-like helix-turn-helix domain FY129_12095 PF02436 Conserved carboxylase domain FY129_12095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_12095 PF00364 Biotin-requiring enzyme FY129_12095 PF00289 Biotin carboxylase, N-terminal domain FY129_12095 PF00682 HMGL-like FY129_12095 PF02785 Biotin carboxylase C-terminal domain FY129_12100 PF00196 Bacterial regulatory proteins, luxR family FY129_12100 PF00072 Response regulator receiver domain FY129_12105 PF00664 ABC transporter transmembrane region FY129_12105 PF00005 ABC transporter FY129_12110 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY129_12110 PF06165 Glycosyltransferase family 36 FY129_12110 PF10091 Putative glucoamylase FY129_12115 PF07687 Peptidase dimerisation domain FY129_12115 PF01546 Peptidase family M20/M25/M40 FY129_12120 PF01266 FAD dependent oxidoreductase FY129_12125 PF00291 Pyridoxal-phosphate dependent enzyme FY129_12130 PF00920 Dehydratase family FY129_12135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY129_12135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY129_12140 PF01370 NAD dependent epimerase/dehydratase family FY129_12145 PF01565 FAD binding domain FY129_12145 PF02913 FAD linked oxidases, C-terminal domain FY129_12150 PF00392 Bacterial regulatory proteins, gntR family FY129_12150 PF07729 FCD domain FY129_12160 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY129_12165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY129_12170 PF03480 Bacterial extracellular solute-binding protein, family 7 FY129_12175 PF16177 Acetyl-coenzyme A synthetase N-terminus FY129_12175 PF00501 AMP-binding enzyme FY129_12175 PF13193 AMP-binding enzyme C-terminal domain FY129_12185 PF01168 Alanine racemase, N-terminal domain FY129_12190 PF13603 Leucyl-tRNA synthetase, Domain 2 FY129_12190 PF00133 tRNA synthetases class I (I, L, M and V) FY129_12190 PF08264 Anticodon-binding domain of tRNA FY129_12205 PF00037 4Fe-4S binding domain FY129_12205 PF11953 Domain of unknown function (DUF3470) FY129_12210 PF01479 S4 domain FY129_12210 PF00579 tRNA synthetases class I (W and Y) FY129_12225 PF01494 FAD binding domain FY129_12235 PF00543 Nitrogen regulatory protein P-II FY129_12240 PF00909 Ammonium Transporter Family FY129_12245 PF01580 FtsK/SpoIIIE family FY129_12245 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY129_12245 PF17854 FtsK alpha domain FY129_12245 PF09397 Ftsk gamma domain FY129_12250 PF03548 Outer membrane lipoprotein carrier protein LolA FY129_12265 PF00072 Response regulator receiver domain FY129_12265 PF00486 Transcriptional regulatory protein, C terminal FY129_12275 PF02559 CarD-like/TRCF domain FY129_12280 PF05088 Bacterial NAD-glutamate dehydrogenase FY129_12285 PF11700 Vacuole effluxer Atg22 like FY129_12290 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY129_12290 PF05233 PHB accumulation regulatory domain FY129_12295 PF00108 Thiolase, N-terminal domain FY129_12295 PF02803 Thiolase, C-terminal domain FY129_12310 PF00210 Ferritin-like domain FY129_12315 PF00293 NUDIX domain FY129_12320 PF04748 Divergent polysaccharide deacetylase FY129_12325 PF13180 PDZ domain FY129_12325 PF03572 Peptidase family S41 FY129_12335 PF02590 Predicted SPOUT methyltransferase FY129_12345 PF01467 Cytidylyltransferase-like FY129_12350 PF00171 Aldehyde dehydrogenase family FY129_12355 PF00696 Amino acid kinase family FY129_12355 PF01472 PUA domain FY129_12360 PF01018 GTP1/OBG FY129_12360 PF01926 50S ribosome-binding GTPase FY129_12365 PF13302 Acetyltransferase (GNAT) domain FY129_12375 PF01016 Ribosomal L27 protein FY129_12380 PF00829 Ribosomal prokaryotic L21 protein FY129_12395 PF03328 HpcH/HpaI aldolase/citrate lyase family FY129_12405 PF00694 Aconitase C-terminal domain FY129_12410 PF00180 Isocitrate/isopropylmalate dehydrogenase FY129_12415 PF03150 Di-haem cytochrome c peroxidase FY129_12420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY129_12420 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY129_12425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_12430 PF01888 CbiD FY129_12435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_12445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_12450 PF02571 Precorrin-6x reductase CbiJ/CobK FY129_12455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_12460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_12465 PF02570 Precorrin-8X methylmutase FY129_12470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY129_12475 PF02514 CobN/Magnesium Chelatase FY129_12480 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY129_12480 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY129_12490 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY129_12490 PF12557 Cob(I)alamin adenosyltransferase N terminal FY129_12495 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY129_12495 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY129_12500 PF03186 CobD/Cbib protein FY129_12505 PF00155 Aminotransferase class I and II FY129_12510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_12510 PF13378 Enolase C-terminal domain-like FY129_12515 PF05336 L-rhamnose mutarotase FY129_12520 PF01232 Mannitol dehydrogenase Rossmann domain FY129_12520 PF08125 Mannitol dehydrogenase C-terminal domain FY129_12525 PF08240 Alcohol dehydrogenase GroES-like domain FY129_12525 PF00107 Zinc-binding dehydrogenase FY129_12535 PF00248 Aldo/keto reductase family FY129_12545 PF02653 Branched-chain amino acid transport system / permease component FY129_12550 PF00005 ABC transporter FY129_12555 PF00392 Bacterial regulatory proteins, gntR family FY129_12555 PF07729 FCD domain FY129_12560 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY129_12560 PF08666 SAF domain FY129_12565 PF01808 AICARFT/IMPCHase bienzyme FY129_12565 PF02142 MGS-like domain FY129_12575 PF01189 16S rRNA methyltransferase RsmB/F FY129_12575 PF01029 NusB family FY129_12580 PF01435 Peptidase family M48 FY129_12590 PF17762 HTH domain found in ParB protein FY129_12590 PF02195 ParB-like nuclease domain FY129_12595 PF13614 AAA domain FY129_12600 PF02527 rRNA small subunit methyltransferase G FY129_12605 PF13932 GidA associated domain FY129_12605 PF01134 Glucose inhibited division protein A FY129_12610 PF01926 50S ribosome-binding GTPase FY129_12610 PF12631 MnmE helical domain FY129_12610 PF10396 GTP-binding protein TrmE N-terminus FY129_12615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY129_12615 PF07498 Rho termination factor, N-terminal domain FY129_12615 PF07497 Rho termination factor, RNA-binding domain FY129_12620 PF03653 Uncharacterised protein family (UPF0093) FY129_12625 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY129_12630 PF03618 Kinase/pyrophosphorylase FY129_12635 PF02545 Maf-like protein FY129_12640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY129_12640 PF01488 Shikimate / quinate 5-dehydrogenase FY129_12640 PF08501 Shikimate dehydrogenase substrate binding domain FY129_12645 PF01121 Dephospho-CoA kinase FY129_12650 PF00929 Exonuclease FY129_12655 PF02556 Preprotein translocase subunit SecB FY129_12660 PF04186 FxsA cytoplasmic membrane protein FY129_12670 PF06725 3D domain FY129_12670 PF03562 MltA specific insert domain FY129_12685 PF00204 DNA gyrase B FY129_12685 PF00986 DNA gyrase B subunit, carboxyl terminus FY129_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_12685 PF01751 Toprim domain FY129_12695 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY129_12710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY129_12715 PF00291 Pyridoxal-phosphate dependent enzyme FY129_12720 PF00290 Tryptophan synthase alpha chain FY129_12725 PF01039 Carboxyl transferase domain FY129_12730 PF08245 Mur ligase middle domain FY129_12730 PF02875 Mur ligase family, glutamate ligase domain FY129_12735 PF00085 Thioredoxin FY129_12740 PF12705 PD-(D/E)XK nuclease superfamily FY129_12740 PF00580 UvrD/REP helicase N-terminal domain FY129_12740 PF13361 UvrD-like helicase C-terminal domain FY129_12750 PF12804 MobA-like NTP transferase domain FY129_12755 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY129_12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_12760 PF00512 His Kinase A (phospho-acceptor) domain FY129_12765 PF05221 S-adenosyl-L-homocysteine hydrolase FY129_12765 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY129_12770 PF00381 PTS HPr component phosphorylation site FY129_12775 PF03830 PTS system sorbose subfamily IIB component FY129_12775 PF03610 PTS system fructose IIA component FY129_12780 PF07475 HPr Serine kinase C-terminal domain FY129_12780 PF02603 HPr Serine kinase N terminus FY129_12785 PF13756 Stimulus-sensing domain FY129_12785 PF00672 HAMP domain FY129_12785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_12785 PF00512 His Kinase A (phospho-acceptor) domain FY129_12785 PF13755 Sensor N-terminal transmembrane domain FY129_12790 PF00486 Transcriptional regulatory protein, C terminal FY129_12790 PF00072 Response regulator receiver domain FY129_12795 PF01293 Phosphoenolpyruvate carboxykinase FY129_12800 PF00472 RF-1 domain FY129_12805 PF04972 BON domain FY129_12805 PF01476 LysM domain FY129_12810 PF00485 Phosphoribulokinase / Uridine kinase family FY129_12815 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY129_12820 PF00977 Histidine biosynthesis protein FY129_12825 PF00977 Histidine biosynthesis protein FY129_12830 PF00117 Glutamine amidotransferase class-I FY129_12840 PF00475 Imidazoleglycerol-phosphate dehydratase FY129_12845 PF00227 Proteasome subunit FY129_12850 PF00004 ATPase family associated with various cellular activities (AAA) FY129_12850 PF07724 AAA domain (Cdc48 subfamily) FY129_12850 PF10431 C-terminal, D2-small domain, of ClpB protein FY129_12860 PF01274 Malate synthase FY129_12875 PF00072 Response regulator receiver domain FY129_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_12880 PF00512 His Kinase A (phospho-acceptor) domain FY129_12885 PF00271 Helicase conserved C-terminal domain FY129_12885 PF04408 Helicase associated domain (HA2) FY129_12885 PF00270 DEAD/DEAH box helicase FY129_12885 PF08482 ATP-dependent helicase C-terminal FY129_12920 PF00270 DEAD/DEAH box helicase FY129_12920 PF00271 Helicase conserved C-terminal domain FY129_12920 PF00570 HRDC domain FY129_12920 PF16124 RecQ zinc-binding FY129_12920 PF09382 RQC domain FY129_12925 PF00480 ROK family FY129_12930 PF13407 Periplasmic binding protein domain FY129_12935 PF02653 Branched-chain amino acid transport system / permease component FY129_12940 PF00005 ABC transporter FY129_12945 PF00485 Phosphoribulokinase / Uridine kinase family FY129_12950 PF00462 Glutaredoxin FY129_12955 PF07972 NrdI Flavodoxin like FY129_12960 PF02867 Ribonucleotide reductase, barrel domain FY129_12960 PF00317 Ribonucleotide reductase, all-alpha domain FY129_12960 PF08343 Ribonucleotide reductase N-terminal FY129_12965 PF00268 Ribonucleotide reductase, small chain FY129_12975 PF02463 RecF/RecN/SMC N terminal domain FY129_12980 PF00899 ThiF family FY129_12980 PF00581 Rhodanese-like domain FY129_12995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_12995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_13005 PF00294 pfkB family carbohydrate kinase FY129_13015 PF05175 Methyltransferase small domain FY129_13015 PF08468 Methyltransferase small domain N-terminal FY129_13020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY129_13020 PF00013 KH domain FY129_13020 PF01138 3' exoribonuclease family, domain 1 FY129_13020 PF03725 3' exoribonuclease family, domain 2 FY129_13020 PF00575 S1 RNA binding domain FY129_13025 PF00312 Ribosomal protein S15 FY129_13030 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY129_13030 PF09157 Pseudouridine synthase II TruB, C-terminal FY129_13030 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY129_13035 PF02033 Ribosome-binding factor A FY129_13040 PF04760 Translation initiation factor IF-2, N-terminal region FY129_13040 PF11987 Translation-initiation factor 2 FY129_13040 PF00009 Elongation factor Tu GTP binding domain FY129_13040 PF03144 Elongation factor Tu domain 2 FY129_13040 PF08364 Bacterial translation initiation factor IF-2 associated region FY129_13050 PF13184 NusA-like KH domain FY129_13050 PF08529 NusA N-terminal domain FY129_13050 PF00575 S1 RNA binding domain FY129_13055 PF02576 RimP N-terminal domain FY129_13055 PF17384 RimP C-terminal SH3 domain FY129_13060 PF05977 Transmembrane secretion effector FY129_13070 PF13406 Transglycosylase SLT domain FY129_13075 PF13662 Toprim domain FY129_13075 PF02132 RecR protein FY129_13085 PF02575 YbaB/EbfC DNA-binding family FY129_13090 PF12169 DNA polymerase III subunits gamma and tau domain III FY129_13090 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY129_13090 PF12170 DNA polymerase III tau subunit V interacting with alpha FY129_13105 PF09297 NADH pyrophosphatase zinc ribbon domain FY129_13105 PF00293 NUDIX domain FY129_13105 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY129_13110 PF00800 Prephenate dehydratase FY129_13110 PF01817 Chorismate mutase type II FY129_13115 PF02348 Cytidylyltransferase FY129_13120 PF00034 Cytochrome c FY129_13125 PF02397 Bacterial sugar transferase FY129_13130 PF00905 Penicillin binding protein transpeptidase domain FY129_13130 PF00912 Transglycosylase FY129_13135 PF04073 Aminoacyl-tRNA editing domain FY129_13140 PF00313 'Cold-shock' DNA-binding domain FY129_13145 PF01546 Peptidase family M20/M25/M40 FY129_13145 PF07687 Peptidase dimerisation domain FY129_13150 PF01047 MarR family FY129_13155 PF01367 5'-3' exonuclease, C-terminal SAM fold FY129_13155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY129_13155 PF00476 DNA polymerase family A FY129_13155 PF01612 3'-5' exonuclease FY129_13160 PF01783 Ribosomal L32p protein family FY129_13165 PF00512 His Kinase A (phospho-acceptor) domain FY129_13165 PF02743 Cache domain FY129_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_13170 PF00158 Sigma-54 interaction domain FY129_13170 PF00072 Response regulator receiver domain FY129_13170 PF02954 Bacterial regulatory protein, Fis family FY129_13175 PF03401 Tripartite tricarboxylate transporter family receptor FY129_13180 PF07331 Tripartite tricarboxylate transporter TctB family FY129_13185 PF01970 Tripartite tricarboxylate transporter TctA family FY129_13190 PF04102 SlyX FY129_13200 PF00226 DnaJ domain FY129_13200 PF01556 DnaJ C terminal domain FY129_13200 PF00684 DnaJ central domain FY129_13205 PF00012 Hsp70 protein FY129_13220 PF01625 Peptide methionine sulfoxide reductase FY129_13225 PF02608 ABC transporter substrate-binding protein PnrA-like FY129_13230 PF00005 ABC transporter FY129_13235 PF02653 Branched-chain amino acid transport system / permease component FY129_13240 PF02653 Branched-chain amino acid transport system / permease component FY129_13245 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY129_13250 PF01048 Phosphorylase superfamily FY129_13255 PF01791 DeoC/LacD family aldolase FY129_13260 PF00591 Glycosyl transferase family, a/b domain FY129_13260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY129_13260 PF02885 Glycosyl transferase family, helical bundle domain FY129_13275 PF00962 Adenosine/AMP deaminase FY129_13280 PF01676 Metalloenzyme superfamily FY129_13290 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY129_13295 PF00510 Cytochrome c oxidase subunit III FY129_13300 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY129_13305 PF06481 COX Aromatic Rich Motif FY129_13305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY129_13310 PF07690 Major Facilitator Superfamily FY129_13310 PF00083 Sugar (and other) transporter FY129_13315 PF01493 GXGXG motif FY129_13315 PF04898 Glutamate synthase central domain FY129_13315 PF00310 Glutamine amidotransferases class-II FY129_13315 PF01645 Conserved region in glutamate synthase FY129_13320 PF00258 Flavodoxin FY129_13320 PF00667 FAD binding domain FY129_13320 PF00175 Oxidoreductase NAD-binding domain FY129_13340 PF02801 Beta-ketoacyl synthase, C-terminal domain FY129_13340 PF00109 Beta-ketoacyl synthase, N-terminal domain FY129_13345 PF07977 FabA-like domain FY129_13355 PF03458 UPF0126 domain FY129_13365 PF06912 Protein of unknown function (DUF1275) FY129_13375 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13380 PF00005 ABC transporter FY129_13385 PF00392 Bacterial regulatory proteins, gntR family FY129_13385 PF07702 UTRA domain FY129_13390 PF01618 MotA/TolQ/ExbB proton channel family FY129_13395 PF02472 Biopolymer transport protein ExbD/TolR FY129_13405 PF02615 Malate/L-lactate dehydrogenase FY129_13420 PF00625 Guanylate kinase FY129_13425 PF07969 Amidohydrolase family FY129_13430 PF06299 Protein of unknown function (DUF1045) FY129_13435 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13440 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13450 PF00005 ABC transporter FY129_13460 PF00005 ABC transporter FY129_13465 PF00005 ABC transporter FY129_13470 PF06007 Phosphonate metabolism protein PhnJ FY129_13475 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY129_13480 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY129_13485 PF06754 Phosphonate metabolism protein PhnG FY129_13490 PF07702 UTRA domain FY129_13490 PF00392 Bacterial regulatory proteins, gntR family FY129_13495 PF05173 Dihydrodipicolinate reductase, C-terminus FY129_13495 PF01113 Dihydrodipicolinate reductase, N-terminus FY129_13500 PF02685 Glucokinase FY129_13505 PF02142 MGS-like domain FY129_13510 PF03411 Penicillin-insensitive murein endopeptidase FY129_13515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_13520 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13525 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13525 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_13530 PF00005 ABC transporter FY129_13530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_13535 PF01266 FAD dependent oxidoreductase FY129_13540 PF00120 Glutamine synthetase, catalytic domain FY129_13545 PF01266 FAD dependent oxidoreductase FY129_13555 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13560 PF00005 ABC transporter FY129_13565 PF00528 Binding-protein-dependent transport system inner membrane component FY129_13570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY129_13580 PF02082 Transcriptional regulator FY129_13585 PF13416 Bacterial extracellular solute-binding protein FY129_13595 PF05987 Bacterial protein of unknown function (DUF898) FY129_13600 PF00171 Aldehyde dehydrogenase family FY129_13605 PF03466 LysR substrate binding domain FY129_13605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_13610 PF00892 EamA-like transporter family FY129_13625 PF00877 NlpC/P60 family FY129_13635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY129_13635 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY129_13640 PF00883 Cytosol aminopeptidase family, catalytic domain FY129_13640 PF02789 Cytosol aminopeptidase family, N-terminal domain FY129_13660 PF00437 Type II/IV secretion system protein FY129_13675 PF13629 Pilus formation protein N terminal region FY129_13675 PF00263 Bacterial type II and III secretion system protein FY129_13675 PF04972 BON domain FY129_13715 PF00117 Glutamine amidotransferase class-I FY129_13720 PF07411 Domain of unknown function (DUF1508) FY129_13725 PF01183 Glycosyl hydrolases family 25 FY129_13730 PF00892 EamA-like transporter family FY129_13735 PF00392 Bacterial regulatory proteins, gntR family FY129_13735 PF00155 Aminotransferase class I and II FY129_13750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_13765 PF06421 GTP-binding protein LepA C-terminus FY129_13765 PF03144 Elongation factor Tu domain 2 FY129_13765 PF00009 Elongation factor Tu GTP binding domain FY129_13765 PF00679 Elongation factor G C-terminus FY129_13770 PF00795 Carbon-nitrogen hydrolase FY129_13800 PF02311 AraC-like ligand binding domain FY129_13800 PF12833 Helix-turn-helix domain FY129_13805 PF03480 Bacterial extracellular solute-binding protein, family 7 FY129_13830 PF05198 Translation initiation factor IF-3, N-terminal domain FY129_13830 PF00707 Translation initiation factor IF-3, C-terminal domain FY129_13835 PF01632 Ribosomal protein L35 FY129_13840 PF00453 Ribosomal protein L20 FY129_13850 PF01409 tRNA synthetases class II core domain (F) FY129_13850 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY129_13855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY129_13855 PF01588 Putative tRNA binding domain FY129_13855 PF03147 Ferredoxin-fold anticodon binding domain FY129_13855 PF03484 tRNA synthetase B5 domain FY129_13855 PF03483 B3/4 domain FY129_13860 PF00248 Aldo/keto reductase family FY129_13865 PF03466 LysR substrate binding domain FY129_13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_13875 PF00248 Aldo/keto reductase family FY129_13880 PF12833 Helix-turn-helix domain FY129_13880 PF01965 DJ-1/PfpI family FY129_13890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_13890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_13905 PF13742 OB-fold nucleic acid binding domain FY129_13905 PF02601 Exonuclease VII, large subunit FY129_13910 PF13378 Enolase C-terminal domain-like FY129_13910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_13915 PF07729 FCD domain FY129_13915 PF00392 Bacterial regulatory proteins, gntR family FY129_13920 PF01047 MarR family FY129_13925 PF00892 EamA-like transporter family FY129_13930 PF02073 Thermophilic metalloprotease (M29) FY129_13935 PF04073 Aminoacyl-tRNA editing domain FY129_13940 PF03960 ArsC family FY129_13955 PF00440 Bacterial regulatory proteins, tetR family FY129_13965 PF00958 GMP synthase C terminal domain FY129_13965 PF00117 Glutamine amidotransferase class-I FY129_13980 PF03073 TspO/MBR family FY129_14005 PF01029 NusB family FY129_14005 PF01189 16S rRNA methyltransferase RsmB/F FY129_14010 PF03330 Lytic transglycolase FY129_14020 PF08331 Domain of unknown function (DUF1730) FY129_14025 PF13417 Glutathione S-transferase, N-terminal domain FY129_14025 PF00043 Glutathione S-transferase, C-terminal domain FY129_14030 PF02673 Bacitracin resistance protein BacA FY129_14045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY129_14055 PF13649 Methyltransferase domain FY129_14060 PF02768 DNA polymerase III beta subunit, C-terminal domain FY129_14060 PF00712 DNA polymerase III beta subunit, N-terminal domain FY129_14060 PF02767 DNA polymerase III beta subunit, central domain FY129_14065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_14070 PF02021 Uncharacterised protein family UPF0102 FY129_14075 PF12464 Maltose acetyltransferase FY129_14075 PF14602 Hexapeptide repeat of succinyl-transferase FY129_14080 PF13416 Bacterial extracellular solute-binding protein FY129_14085 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14090 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14095 PF00005 ABC transporter FY129_14105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY129_14105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY129_14110 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY129_14110 PF01078 Magnesium chelatase, subunit ChlI FY129_14115 PF00291 Pyridoxal-phosphate dependent enzyme FY129_14120 PF01810 LysE type translocator FY129_14125 PF00692 dUTPase FY129_14130 PF00009 Elongation factor Tu GTP binding domain FY129_14130 PF16658 Class II release factor RF3, C-terminal domain FY129_14130 PF03144 Elongation factor Tu domain 2 FY129_14135 PF04127 DNA / pantothenate metabolism flavoprotein FY129_14135 PF02441 Flavoprotein FY129_14150 PF03109 ABC1 family FY129_14155 PF01209 ubiE/COQ5 methyltransferase family FY129_14160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY129_14160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY129_14160 PF06827 Zinc finger found in FPG and IleRS FY129_14165 PF00378 Enoyl-CoA hydratase/isomerase FY129_14170 PF01649 Ribosomal protein S20 FY129_14225 PF06472 ABC transporter transmembrane region 2 FY129_14225 PF00005 ABC transporter FY129_14250 PF01261 Xylose isomerase-like TIM barrel FY129_14255 PF00485 Phosphoribulokinase / Uridine kinase family FY129_14260 PF01261 Xylose isomerase-like TIM barrel FY129_14265 PF02653 Branched-chain amino acid transport system / permease component FY129_14270 PF02653 Branched-chain amino acid transport system / permease component FY129_14275 PF00005 ABC transporter FY129_14285 PF00356 Bacterial regulatory proteins, lacI family FY129_14295 PF02954 Bacterial regulatory protein, Fis family FY129_14295 PF01590 GAF domain FY129_14295 PF00158 Sigma-54 interaction domain FY129_14300 PF08240 Alcohol dehydrogenase GroES-like domain FY129_14300 PF00107 Zinc-binding dehydrogenase FY129_14310 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_14315 PF00330 Aconitase family (aconitate hydratase) FY129_14315 PF06434 Aconitate hydratase 2 N-terminus FY129_14315 PF11791 Aconitate B N-terminal domain FY129_14330 PF13953 PapC C-terminal domain FY129_14330 PF13954 PapC N-terminal domain FY129_14330 PF00577 Outer membrane usher protein FY129_14340 PF00005 ABC transporter FY129_14345 PF00005 ABC transporter FY129_14345 PF00664 ABC transporter transmembrane region FY129_14350 PF03401 Tripartite tricarboxylate transporter family receptor FY129_14355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY129_14355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY129_14365 PF05532 CsbD-like FY129_14385 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14390 PF00005 ABC transporter FY129_14390 PF08402 TOBE domain FY129_14400 PF00459 Inositol monophosphatase family FY129_14405 PF00005 ABC transporter FY129_14405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_14415 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14415 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_14420 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_14430 PF07729 FCD domain FY129_14430 PF00392 Bacterial regulatory proteins, gntR family FY129_14440 PF13378 Enolase C-terminal domain-like FY129_14440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_14445 PF00005 ABC transporter FY129_14445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_14450 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14450 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_14455 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_14465 PF07729 FCD domain FY129_14465 PF00392 Bacterial regulatory proteins, gntR family FY129_14470 PF08450 SMP-30/Gluconolactonase/LRE-like region FY129_14475 PF00701 Dihydrodipicolinate synthetase family FY129_14480 PF07690 Major Facilitator Superfamily FY129_14490 PF00037 4Fe-4S binding domain FY129_14490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY129_14490 PF00384 Molybdopterin oxidoreductase FY129_14490 PF01568 Molydopterin dinucleotide binding domain FY129_14490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY129_14495 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY129_14495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY129_14495 PF00037 4Fe-4S binding domain FY129_14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_14505 PF03466 LysR substrate binding domain FY129_14510 PF01613 Flavin reductase like domain FY129_14515 PF02530 Porin subfamily FY129_14520 PF00563 EAL domain FY129_14520 PF00990 Diguanylate cyclase, GGDEF domain FY129_14520 PF03707 Bacterial signalling protein N terminal repeat FY129_14525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_14525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_14530 PF00005 ABC transporter FY129_14535 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14540 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14545 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_14555 PF00356 Bacterial regulatory proteins, lacI family FY129_14560 PF05544 Proline racemase FY129_14570 PF01266 FAD dependent oxidoreductase FY129_14575 PF00005 ABC transporter FY129_14580 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14585 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14595 PF02615 Malate/L-lactate dehydrogenase FY129_14600 PF00701 Dihydrodipicolinate synthetase family FY129_14605 PF07729 FCD domain FY129_14605 PF00392 Bacterial regulatory proteins, gntR family FY129_14610 PF12327 FtsZ family, C-terminal domain FY129_14610 PF00091 Tubulin/FtsZ family, GTPase domain FY129_14615 PF00072 Response regulator receiver domain FY129_14635 PF00005 ABC transporter FY129_14640 PF13533 Biotin-lipoyl like FY129_14645 PF02056 Family 4 glycosyl hydrolase FY129_14645 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY129_14650 PF00005 ABC transporter FY129_14650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_14655 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_14655 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14660 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_14670 PF02056 Family 4 glycosyl hydrolase FY129_14670 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY129_14695 PF00480 ROK family FY129_14700 PF13416 Bacterial extracellular solute-binding protein FY129_14705 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14710 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14715 PF00206 Lyase FY129_14715 PF14698 Argininosuccinate lyase C-terminal FY129_14720 PF00005 ABC transporter FY129_14720 PF08402 TOBE domain FY129_14725 PF00294 pfkB family carbohydrate kinase FY129_14730 PF00884 Sulfatase FY129_14730 PF12411 Choline sulfatase enzyme C terminal FY129_14735 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY129_14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_14740 PF03466 LysR substrate binding domain FY129_14745 PF00005 ABC transporter FY129_14750 PF01032 FecCD transport family FY129_14755 PF01032 FecCD transport family FY129_14765 PF00593 TonB dependent receptor FY129_14765 PF07715 TonB-dependent Receptor Plug Domain FY129_14770 PF12833 Helix-turn-helix domain FY129_14775 PF00141 Peroxidase FY129_14780 PF03466 LysR substrate binding domain FY129_14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_14790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_14790 PF00672 HAMP domain FY129_14790 PF00512 His Kinase A (phospho-acceptor) domain FY129_14795 PF00072 Response regulator receiver domain FY129_14795 PF00486 Transcriptional regulatory protein, C terminal FY129_14800 PF00529 HlyD membrane-fusion protein of T1SS FY129_14800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_14805 PF00873 AcrB/AcrD/AcrF family FY129_14815 PF01865 Protein of unknown function DUF47 FY129_14820 PF01384 Phosphate transporter family FY129_14825 PF02735 Ku70/Ku80 beta-barrel domain FY129_14830 PF01068 ATP dependent DNA ligase domain FY129_14830 PF13298 DNA polymerase Ligase (LigD) FY129_14830 PF04679 ATP dependent DNA ligase C terminal region FY129_14835 PF02735 Ku70/Ku80 beta-barrel domain FY129_14850 PF03707 Bacterial signalling protein N terminal repeat FY129_14850 PF00563 EAL domain FY129_14850 PF13188 PAS domain FY129_14850 PF00990 Diguanylate cyclase, GGDEF domain FY129_14860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_14865 PF03786 D-mannonate dehydratase (UxuA) FY129_14870 PF00392 Bacterial regulatory proteins, gntR family FY129_14870 PF07729 FCD domain FY129_14875 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14880 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_14880 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14885 PF00005 ABC transporter FY129_14885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_14890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_14890 PF00005 ABC transporter FY129_14895 PF03459 TOBE domain FY129_14895 PF17912 MalK OB fold domain FY129_14895 PF00005 ABC transporter FY129_14900 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14905 PF00528 Binding-protein-dependent transport system inner membrane component FY129_14915 PF17806 Sarcosine oxidase A3 domain FY129_14915 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_14915 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY129_14915 PF01571 Aminomethyltransferase folate-binding domain FY129_14920 PF00356 Bacterial regulatory proteins, lacI family FY129_14930 PF13361 UvrD-like helicase C-terminal domain FY129_14930 PF00580 UvrD/REP helicase N-terminal domain FY129_14935 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY129_14940 PF16363 GDP-mannose 4,6 dehydratase FY129_14945 PF04321 RmlD substrate binding domain FY129_14950 PF00483 Nucleotidyl transferase FY129_14965 PF05045 Rhamnan synthesis protein F FY129_14990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_14990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_14995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FY129_15000 PF05050 Methyltransferase FkbM domain FY129_15005 PF00664 ABC transporter transmembrane region FY129_15005 PF00005 ABC transporter FY129_15015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_15015 PF03466 LysR substrate binding domain FY129_15020 PF00248 Aldo/keto reductase family FY129_15035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY129_15035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY129_15040 PF11953 Domain of unknown function (DUF3470) FY129_15040 PF00037 4Fe-4S binding domain FY129_15050 PF12852 Cupin FY129_15050 PF12833 Helix-turn-helix domain FY129_15055 PF00106 short chain dehydrogenase FY129_15060 PF03009 Glycerophosphoryl diester phosphodiesterase family FY129_15065 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY129_15065 PF00480 ROK family FY129_15075 PF16220 Domain of unknown function (DUF4880) FY129_15075 PF04773 FecR protein FY129_15080 PF07715 TonB-dependent Receptor Plug Domain FY129_15080 PF00593 TonB dependent receptor FY129_15085 PF07690 Major Facilitator Superfamily FY129_15105 PF07470 Glycosyl Hydrolase Family 88 FY129_15115 PF00005 ABC transporter FY129_15115 PF08402 TOBE domain FY129_15120 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15125 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15130 PF00356 Bacterial regulatory proteins, lacI family FY129_15140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_15140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_15145 PF01261 Xylose isomerase-like TIM barrel FY129_15150 PF13407 Periplasmic binding protein domain FY129_15155 PF13407 Periplasmic binding protein domain FY129_15160 PF00356 Bacterial regulatory proteins, lacI family FY129_15165 PF00108 Thiolase, N-terminal domain FY129_15165 PF02803 Thiolase, C-terminal domain FY129_15170 PF01144 Coenzyme A transferase FY129_15175 PF01144 Coenzyme A transferase FY129_15180 PF09339 IclR helix-turn-helix domain FY129_15180 PF01614 Bacterial transcriptional regulator FY129_15190 PF01494 FAD binding domain FY129_15195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_15195 PF03466 LysR substrate binding domain FY129_15210 PF00775 Dioxygenase FY129_15210 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY129_15215 PF00775 Dioxygenase FY129_15220 PF10397 Adenylosuccinate lyase C-terminus FY129_15220 PF00206 Lyase FY129_15225 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15230 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15235 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_15240 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_15245 PF00005 ABC transporter FY129_15250 PF08501 Shikimate dehydrogenase substrate binding domain FY129_15250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY129_15255 PF01220 Dehydroquinase class II FY129_15265 PF01261 Xylose isomerase-like TIM barrel FY129_15265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_15280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_15280 PF00005 ABC transporter FY129_15285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_15290 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15295 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15295 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_15310 PF13458 Periplasmic binding protein FY129_15325 PF00005 ABC transporter FY129_15325 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_15330 PF00005 ABC transporter FY129_15340 PF00294 pfkB family carbohydrate kinase FY129_15345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY129_15345 PF00205 Thiamine pyrophosphate enzyme, central domain FY129_15345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY129_15350 PF01261 Xylose isomerase-like TIM barrel FY129_15355 PF04962 KduI/IolB family FY129_15360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_15360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_15365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_15365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_15370 PF00356 Bacterial regulatory proteins, lacI family FY129_15375 PF01047 MarR family FY129_15380 PF02633 Creatinine amidohydrolase FY129_15385 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY129_15385 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY129_15405 PF13505 Outer membrane protein beta-barrel domain FY129_15425 PF03824 High-affinity nickel-transport protein FY129_15445 PF01081 KDPG and KHG aldolase FY129_15450 PF01928 CYTH domain FY129_15460 PF17773 UPF0176 acylphosphatase like domain FY129_15460 PF00581 Rhodanese-like domain FY129_15465 PF00563 EAL domain FY129_15465 PF00990 Diguanylate cyclase, GGDEF domain FY129_15465 PF03707 Bacterial signalling protein N terminal repeat FY129_15465 PF13188 PAS domain FY129_15470 PF03180 NLPA lipoprotein FY129_15475 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15480 PF09383 NIL domain FY129_15480 PF00005 ABC transporter FY129_15485 PF00881 Nitroreductase family FY129_15490 PF00232 Glycosyl hydrolase family 1 FY129_15495 PF01261 Xylose isomerase-like TIM barrel FY129_15500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_15500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_15505 PF00356 Bacterial regulatory proteins, lacI family FY129_15505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY129_15515 PF07690 Major Facilitator Superfamily FY129_15520 PF13533 Biotin-lipoyl like FY129_15525 PF00440 Bacterial regulatory proteins, tetR family FY129_15530 PF03471 Transporter associated domain FY129_15530 PF03741 Integral membrane protein TerC family FY129_15535 PF02080 TrkA-C domain FY129_15535 PF03600 Citrate transporter FY129_15540 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY129_15545 PF01336 OB-fold nucleic acid binding domain FY129_15545 PF00152 tRNA synthetases class II (D, K and N) FY129_15550 PF01734 Patatin-like phospholipase FY129_15560 PF01297 Zinc-uptake complex component A periplasmic FY129_15565 PF00005 ABC transporter FY129_15570 PF00950 ABC 3 transport family FY129_15575 PF00950 ABC 3 transport family FY129_15590 PF09339 IclR helix-turn-helix domain FY129_15590 PF01614 Bacterial transcriptional regulator FY129_15595 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY129_15600 PF13936 Helix-turn-helix domain FY129_15600 PF04198 Putative sugar-binding domain FY129_15615 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY129_15615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY129_15625 PF10576 Iron-sulfur binding domain of endonuclease III FY129_15625 PF00633 Helix-hairpin-helix motif FY129_15625 PF00730 HhH-GPD superfamily base excision DNA repair protein FY129_15640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_15640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_15645 PF13419 Haloacid dehalogenase-like hydrolase FY129_15650 PF01232 Mannitol dehydrogenase Rossmann domain FY129_15650 PF08125 Mannitol dehydrogenase C-terminal domain FY129_15660 PF08402 TOBE domain FY129_15660 PF00005 ABC transporter FY129_15665 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15670 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15680 PF04198 Putative sugar-binding domain FY129_15685 PF00005 ABC transporter FY129_15685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_15690 PF01546 Peptidase family M20/M25/M40 FY129_15690 PF07687 Peptidase dimerisation domain FY129_15695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_15700 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15705 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_15705 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15715 PF01965 DJ-1/PfpI family FY129_15720 PF01425 Amidase FY129_15725 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_15725 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15730 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_15740 PF03466 LysR substrate binding domain FY129_15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_15745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_15745 PF00005 ABC transporter FY129_15750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_15750 PF00005 ABC transporter FY129_15755 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15755 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_15760 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_15770 PF01244 Membrane dipeptidase (Peptidase family M19) FY129_15775 PF00156 Phosphoribosyl transferase domain FY129_15780 PF07687 Peptidase dimerisation domain FY129_15780 PF01546 Peptidase family M20/M25/M40 FY129_15785 PF07690 Major Facilitator Superfamily FY129_15790 PF03466 LysR substrate binding domain FY129_15790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_15795 PF01979 Amidohydrolase family FY129_15795 PF13382 Adenine deaminase C-terminal domain FY129_15805 PF00005 ABC transporter FY129_15805 PF08402 TOBE domain FY129_15815 PF00528 Binding-protein-dependent transport system inner membrane component FY129_15825 PF00356 Bacterial regulatory proteins, lacI family FY129_15830 PF03466 LysR substrate binding domain FY129_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_15835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_15835 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_15835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_15840 PF07715 TonB-dependent Receptor Plug Domain FY129_15855 PF00296 Luciferase-like monooxygenase FY129_15860 PF00005 ABC transporter FY129_15865 PF01032 FecCD transport family FY129_15870 PF01032 FecCD transport family FY129_15880 PF04954 Siderophore-interacting protein FY129_15880 PF08021 Siderophore-interacting FAD-binding domain FY129_15890 PF13193 AMP-binding enzyme C-terminal domain FY129_15890 PF00975 Thioesterase domain FY129_15890 PF00550 Phosphopantetheine attachment site FY129_15890 PF00501 AMP-binding enzyme FY129_15890 PF00668 Condensation domain FY129_15895 PF00975 Thioesterase domain FY129_15895 PF00550 Phosphopantetheine attachment site FY129_15895 PF00668 Condensation domain FY129_15895 PF00501 AMP-binding enzyme FY129_15900 PF00668 Condensation domain FY129_15900 PF13193 AMP-binding enzyme C-terminal domain FY129_15900 PF00501 AMP-binding enzyme FY129_15900 PF00550 Phosphopantetheine attachment site FY129_15905 PF00425 chorismate binding enzyme FY129_15910 PF00501 AMP-binding enzyme FY129_15910 PF13193 AMP-binding enzyme C-terminal domain FY129_15915 PF00857 Isochorismatase family FY129_15915 PF00550 Phosphopantetheine attachment site FY129_15925 PF01648 4'-phosphopantetheinyl transferase superfamily FY129_15925 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY129_15935 PF00529 HlyD membrane-fusion protein of T1SS FY129_15935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_15940 PF00005 ABC transporter FY129_15940 PF00664 ABC transporter transmembrane region FY129_15950 PF03466 LysR substrate binding domain FY129_15950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_15955 PF03264 NapC/NirT cytochrome c family, N-terminal region FY129_15960 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY129_15965 PF01568 Molydopterin dinucleotide binding domain FY129_15965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY129_15965 PF00384 Molybdopterin oxidoreductase FY129_15980 PF06796 Periplasmic nitrate reductase protein NapE FY129_15990 PF00005 ABC transporter FY129_16015 PF01136 Peptidase family U32 FY129_16025 PF04343 Protein of unknown function, DUF488 FY129_16030 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY129_16035 PF02441 Flavoprotein FY129_16045 PF00510 Cytochrome c oxidase subunit III FY129_16055 PF00034 Cytochrome c FY129_16060 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY129_16065 PF08406 CbbQ/NirQ/NorQ C-terminal FY129_16065 PF07728 AAA domain (dynein-related subfamily) FY129_16070 PF00092 von Willebrand factor type A domain FY129_16090 PF07732 Multicopper oxidase FY129_16090 PF00394 Multicopper oxidase FY129_16105 PF00034 Cytochrome c FY129_16125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_16125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_16135 PF00356 Bacterial regulatory proteins, lacI family FY129_16140 PF02653 Branched-chain amino acid transport system / permease component FY129_16145 PF02653 Branched-chain amino acid transport system / permease component FY129_16150 PF00005 ABC transporter FY129_16155 PF13407 Periplasmic binding protein domain FY129_16165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_16165 PF03466 LysR substrate binding domain FY129_16180 PF00356 Bacterial regulatory proteins, lacI family FY129_16185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_16185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_16190 PF01261 Xylose isomerase-like TIM barrel FY129_16195 PF13416 Bacterial extracellular solute-binding protein FY129_16200 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16205 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16210 PF00005 ABC transporter FY129_16210 PF17912 MalK OB fold domain FY129_16210 PF03459 TOBE domain FY129_16225 PF03741 Integral membrane protein TerC family FY129_16225 PF03471 Transporter associated domain FY129_16230 PF00356 Bacterial regulatory proteins, lacI family FY129_16245 PF00459 Inositol monophosphatase family FY129_16250 PF03707 Bacterial signalling protein N terminal repeat FY129_16250 PF13188 PAS domain FY129_16250 PF00563 EAL domain FY129_16250 PF00990 Diguanylate cyclase, GGDEF domain FY129_16275 PF04717 Type VI secretion system, phage-baseplate injector FY129_16295 PF00004 ATPase family associated with various cellular activities (AAA) FY129_16295 PF10431 C-terminal, D2-small domain, of ClpB protein FY129_16295 PF17871 AAA lid domain FY129_16295 PF07724 AAA domain (Cdc48 subfamily) FY129_16305 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY129_16310 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY129_16330 PF05947 Type VI secretion system, TssF FY129_16345 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY129_16350 PF00691 OmpA family FY129_16355 PF06761 Intracellular multiplication and human macrophage-killing FY129_16355 PF14331 ImcF-related N-terminal domain FY129_16355 PF06744 Type VI secretion protein IcmF C-terminal FY129_16370 PF02563 Polysaccharide biosynthesis/export protein FY129_16380 PF00083 Sugar (and other) transporter FY129_16380 PF08946 Osmosensory transporter coiled coil FY129_16390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_16390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_16395 PF00106 short chain dehydrogenase FY129_16400 PF02653 Branched-chain amino acid transport system / permease component FY129_16405 PF00005 ABC transporter FY129_16410 PF13407 Periplasmic binding protein domain FY129_16415 PF12833 Helix-turn-helix domain FY129_16420 PF00107 Zinc-binding dehydrogenase FY129_16420 PF08240 Alcohol dehydrogenase GroES-like domain FY129_16435 PF00005 ABC transporter FY129_16445 PF00245 Alkaline phosphatase FY129_16450 PF00440 Bacterial regulatory proteins, tetR family FY129_16460 PF00551 Formyl transferase FY129_16465 PF00464 Serine hydroxymethyltransferase FY129_16475 PF01571 Aminomethyltransferase folate-binding domain FY129_16475 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY129_16475 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_16475 PF17806 Sarcosine oxidase A3 domain FY129_16485 PF01266 FAD dependent oxidoreductase FY129_16500 PF00701 Dihydrodipicolinate synthetase family FY129_16505 PF00171 Aldehyde dehydrogenase family FY129_16510 PF01266 FAD dependent oxidoreductase FY129_16520 PF00005 ABC transporter FY129_16520 PF00571 CBS domain FY129_16525 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16530 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16535 PF05544 Proline racemase FY129_16540 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY129_16540 PF03807 NADP oxidoreductase coenzyme F420-dependent FY129_16550 PF00175 Oxidoreductase NAD-binding domain FY129_16550 PF00111 2Fe-2S iron-sulfur cluster binding domain FY129_16550 PF00970 Oxidoreductase FAD-binding domain FY129_16555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY129_16555 PF00355 Rieske [2Fe-2S] domain FY129_16575 PF01638 HxlR-like helix-turn-helix FY129_16585 PF07969 Amidohydrolase family FY129_16600 PF00005 ABC transporter FY129_16625 PF07690 Major Facilitator Superfamily FY129_16635 PF01979 Amidohydrolase family FY129_16640 PF00817 impB/mucB/samB family FY129_16640 PF11799 impB/mucB/samB family C-terminal domain FY129_16660 PF17912 MalK OB fold domain FY129_16660 PF00005 ABC transporter FY129_16665 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16670 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16695 PF00455 DeoR C terminal sensor domain FY129_16695 PF08220 DeoR-like helix-turn-helix domain FY129_16700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_16700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_16705 PF00005 ABC transporter FY129_16710 PF02653 Branched-chain amino acid transport system / permease component FY129_16715 PF13407 Periplasmic binding protein domain FY129_16720 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY129_16720 PF00480 ROK family FY129_16730 PF01177 Asp/Glu/Hydantoin racemase FY129_16735 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16740 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16750 PF00005 ABC transporter FY129_16750 PF08402 TOBE domain FY129_16770 PF00196 Bacterial regulatory proteins, luxR family FY129_16780 PF00672 HAMP domain FY129_16780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_16780 PF00512 His Kinase A (phospho-acceptor) domain FY129_16785 PF00486 Transcriptional regulatory protein, C terminal FY129_16785 PF00072 Response regulator receiver domain FY129_16805 PF00005 ABC transporter FY129_16805 PF02687 FtsX-like permease family FY129_16805 PF12704 MacB-like periplasmic core domain FY129_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_16815 PF03466 LysR substrate binding domain FY129_16825 PF00510 Cytochrome c oxidase subunit III FY129_16830 PF00510 Cytochrome c oxidase subunit III FY129_16835 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY129_16840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY129_16845 PF00034 Cytochrome c FY129_16855 PF00890 FAD binding domain FY129_16855 PF02910 Fumarate reductase flavoprotein C-term FY129_16860 PF05199 GMC oxidoreductase FY129_16860 PF00732 GMC oxidoreductase FY129_16865 PF05199 GMC oxidoreductase FY129_16865 PF00732 GMC oxidoreductase FY129_16870 PF03459 TOBE domain FY129_16870 PF17912 MalK OB fold domain FY129_16870 PF00005 ABC transporter FY129_16875 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16880 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16885 PF01547 Bacterial extracellular solute-binding protein FY129_16890 PF00171 Aldehyde dehydrogenase family FY129_16895 PF00378 Enoyl-CoA hydratase/isomerase FY129_16900 PF01144 Coenzyme A transferase FY129_16905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_16905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_16910 PF00356 Bacterial regulatory proteins, lacI family FY129_16915 PF03928 Haem-degrading FY129_16920 PF07715 TonB-dependent Receptor Plug Domain FY129_16925 PF01497 Periplasmic binding protein FY129_16930 PF01032 FecCD transport family FY129_16935 PF01032 FecCD transport family FY129_16940 PF00005 ABC transporter FY129_16955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_16955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_16960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_16960 PF04324 BFD-like [2Fe-2S] binding domain FY129_16965 PF04324 BFD-like [2Fe-2S] binding domain FY129_16965 PF01266 FAD dependent oxidoreductase FY129_16970 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16975 PF00528 Binding-protein-dependent transport system inner membrane component FY129_16980 PF00005 ABC transporter FY129_16980 PF08402 TOBE domain FY129_16995 PF00795 Carbon-nitrogen hydrolase FY129_17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17000 PF03466 LysR substrate binding domain FY129_17005 PF00857 Isochorismatase family FY129_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17010 PF03466 LysR substrate binding domain FY129_17020 PF03466 LysR substrate binding domain FY129_17020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17025 PF05163 DinB family FY129_17030 PF00293 NUDIX domain FY129_17035 PF02567 Phenazine biosynthesis-like protein FY129_17050 PF00155 Aminotransferase class I and II FY129_17050 PF00392 Bacterial regulatory proteins, gntR family FY129_17060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17060 PF03466 LysR substrate binding domain FY129_17075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_17080 PF00881 Nitroreductase family FY129_17095 PF01323 DSBA-like thioredoxin domain FY129_17100 PF01565 FAD binding domain FY129_17100 PF02913 FAD linked oxidases, C-terminal domain FY129_17105 PF00384 Molybdopterin oxidoreductase FY129_17105 PF01568 Molydopterin dinucleotide binding domain FY129_17110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_17115 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17120 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_17120 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17125 PF00005 ABC transporter FY129_17125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_17135 PF00296 Luciferase-like monooxygenase FY129_17140 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY129_17145 PF03358 NADPH-dependent FMN reductase FY129_17160 PF01053 Cys/Met metabolism PLP-dependent enzyme FY129_17165 PF01037 Lrp/AsnC ligand binding domain FY129_17170 PF02733 Dak1 domain FY129_17180 PF00106 short chain dehydrogenase FY129_17185 PF02798 Glutathione S-transferase, N-terminal domain FY129_17190 PF00873 AcrB/AcrD/AcrF family FY129_17200 PF00440 Bacterial regulatory proteins, tetR family FY129_17205 PF02801 Beta-ketoacyl synthase, C-terminal domain FY129_17205 PF00109 Beta-ketoacyl synthase, N-terminal domain FY129_17210 PF00091 Tubulin/FtsZ family, GTPase domain FY129_17210 PF12327 FtsZ family, C-terminal domain FY129_17225 PF01554 MatE FY129_17245 PF00753 Metallo-beta-lactamase superfamily FY129_17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17250 PF03466 LysR substrate binding domain FY129_17260 PF01638 HxlR-like helix-turn-helix FY129_17270 PF02687 FtsX-like permease family FY129_17270 PF00005 ABC transporter FY129_17270 PF12704 MacB-like periplasmic core domain FY129_17275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_17280 PF11808 Phosphate regulon sensor protein PhoR FY129_17280 PF00989 PAS fold FY129_17280 PF00512 His Kinase A (phospho-acceptor) domain FY129_17280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_17285 PF00486 Transcriptional regulatory protein, C terminal FY129_17285 PF00072 Response regulator receiver domain FY129_17305 PF05593 RHS Repeat FY129_17305 PF03527 RHS protein FY129_17325 PF04717 Type VI secretion system, phage-baseplate injector FY129_17335 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_17335 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17360 PF02661 Fic/DOC family FY129_17360 PF13784 Fic/DOC family N-terminal FY129_17375 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_17380 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17385 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_17410 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17415 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17415 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_17420 PF00005 ABC transporter FY129_17420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_17425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_17425 PF00005 ABC transporter FY129_17435 PF02910 Fumarate reductase flavoprotein C-term FY129_17435 PF00890 FAD binding domain FY129_17445 PF13407 Periplasmic binding protein domain FY129_17450 PF00005 ABC transporter FY129_17455 PF02653 Branched-chain amino acid transport system / permease component FY129_17470 PF00248 Aldo/keto reductase family FY129_17475 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_17475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY129_17475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_17480 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY129_17480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_17490 PF00296 Luciferase-like monooxygenase FY129_17495 PF02653 Branched-chain amino acid transport system / permease component FY129_17500 PF02653 Branched-chain amino acid transport system / permease component FY129_17505 PF00005 ABC transporter FY129_17515 PF00296 Luciferase-like monooxygenase FY129_17520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_17520 PF00005 ABC transporter FY129_17525 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17525 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_17530 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_17540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_17545 PF00296 Luciferase-like monooxygenase FY129_17555 PF00296 Luciferase-like monooxygenase FY129_17560 PF00296 Luciferase-like monooxygenase FY129_17565 PF00291 Pyridoxal-phosphate dependent enzyme FY129_17575 PF13635 Domain of unknown function (DUF4143) FY129_17575 PF13173 AAA domain FY129_17585 PF01850 PIN domain FY129_17590 PF00701 Dihydrodipicolinate synthetase family FY129_17595 PF00155 Aminotransferase class I and II FY129_17605 PF05378 Hydantoinase/oxoprolinase N-terminal region FY129_17605 PF01968 Hydantoinase/oxoprolinase FY129_17610 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_17615 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17620 PF00528 Binding-protein-dependent transport system inner membrane component FY129_17625 PF00005 ABC transporter FY129_17635 PF07729 FCD domain FY129_17635 PF00392 Bacterial regulatory proteins, gntR family FY129_17655 PF01047 MarR family FY129_17670 PF03466 LysR substrate binding domain FY129_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17675 PF00106 short chain dehydrogenase FY129_17695 PF00171 Aldehyde dehydrogenase family FY129_17700 PF08240 Alcohol dehydrogenase GroES-like domain FY129_17700 PF00107 Zinc-binding dehydrogenase FY129_17705 PF03466 LysR substrate binding domain FY129_17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_17725 PF01810 LysE type translocator FY129_17730 PF07536 HWE histidine kinase FY129_17730 PF13426 PAS domain FY129_17730 PF13581 Histidine kinase-like ATPase domain FY129_17755 PF00199 Catalase FY129_17755 PF06628 Catalase-related immune-responsive FY129_17755 PF18011 C-terminal domain found in long catalases FY129_17775 PF00313 'Cold-shock' DNA-binding domain FY129_17805 PF08240 Alcohol dehydrogenase GroES-like domain FY129_17805 PF00107 Zinc-binding dehydrogenase FY129_17810 PF00561 alpha/beta hydrolase fold FY129_17815 PF00106 short chain dehydrogenase FY129_17820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY129_17825 PF00106 short chain dehydrogenase FY129_17830 PF00440 Bacterial regulatory proteins, tetR family FY129_17845 PF01810 LysE type translocator FY129_17855 PF02525 Flavodoxin-like fold FY129_17900 PF01551 Peptidase family M23 FY129_17900 PF10145 Phage-related minor tail protein FY129_17900 PF01464 Transglycosylase SLT domain FY129_17905 PF02861 Clp amino terminal domain, pathogenicity island component FY129_17905 PF10431 C-terminal, D2-small domain, of ClpB protein FY129_17905 PF00004 ATPase family associated with various cellular activities (AAA) FY129_17905 PF17871 AAA lid domain FY129_17905 PF07724 AAA domain (Cdc48 subfamily) FY129_17915 PF05175 Methyltransferase small domain FY129_17915 PF17827 PrmC N-terminal domain FY129_17920 PF03462 PCRF domain FY129_17920 PF00472 RF-1 domain FY129_17925 PF01590 GAF domain FY129_17925 PF05524 PEP-utilising enzyme, N-terminal FY129_17925 PF00391 PEP-utilising enzyme, mobile domain FY129_17925 PF02896 PEP-utilising enzyme, TIM barrel domain FY129_17930 PF13840 ACT domain FY129_17930 PF00696 Amino acid kinase family FY129_17930 PF01842 ACT domain FY129_17935 PF00271 Helicase conserved C-terminal domain FY129_17935 PF00270 DEAD/DEAH box helicase FY129_17940 PF03435 Saccharopine dehydrogenase NADP binding domain FY129_17940 PF16653 Saccharopine dehydrogenase C-terminal domain FY129_17945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY129_17960 PF16363 GDP-mannose 4,6 dehydratase FY129_17970 PF13426 PAS domain FY129_17970 PF07536 HWE histidine kinase FY129_17970 PF13581 Histidine kinase-like ATPase domain FY129_17975 PF13426 PAS domain FY129_17975 PF08447 PAS fold FY129_17975 PF07536 HWE histidine kinase FY129_17980 PF00072 Response regulator receiver domain FY129_17990 PF08281 Sigma-70, region 4 FY129_17990 PF04542 Sigma-70 region 2 FY129_17995 PF01037 Lrp/AsnC ligand binding domain FY129_18000 PF00171 Aldehyde dehydrogenase family FY129_18000 PF01619 Proline dehydrogenase FY129_18000 PF14850 DNA-binding domain of Proline dehydrogenase FY129_18000 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY129_18005 PF00005 ABC transporter FY129_18010 PF00528 Binding-protein-dependent transport system inner membrane component FY129_18015 PF09084 NMT1/THI5 like FY129_18020 PF00171 Aldehyde dehydrogenase family FY129_18025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_18025 PF03466 LysR substrate binding domain FY129_18030 PF13409 Glutathione S-transferase, N-terminal domain FY129_18040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY129_18040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY129_18040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY129_18045 PF16363 GDP-mannose 4,6 dehydratase FY129_18050 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY129_18050 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY129_18070 PF01965 DJ-1/PfpI family FY129_18090 PF03275 UDP-galactopyranose mutase FY129_18100 PF05974 Domain of unknown function (DUF892) FY129_18105 PF01011 PQQ enzyme repeat FY129_18125 PF00501 AMP-binding enzyme FY129_18125 PF13193 AMP-binding enzyme C-terminal domain FY129_18130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY129_18130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY129_18135 PF00732 GMC oxidoreductase FY129_18135 PF05199 GMC oxidoreductase FY129_18140 PF02653 Branched-chain amino acid transport system / permease component FY129_18140 PF11862 Domain of unknown function (DUF3382) FY129_18145 PF02653 Branched-chain amino acid transport system / permease component FY129_18150 PF00005 ABC transporter FY129_18155 PF00005 ABC transporter FY129_18155 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_18170 PF00296 Luciferase-like monooxygenase FY129_18195 PF17762 HTH domain found in ParB protein FY129_18195 PF02195 ParB-like nuclease domain FY129_18235 PF07352 Bacteriophage Mu Gam like protein FY129_18270 PF00182 Chitinase class I FY129_18300 PF04233 Phage Mu protein F like protein FY129_18445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_18445 PF13378 Enolase C-terminal domain-like FY129_18450 PF00392 Bacterial regulatory proteins, gntR family FY129_18450 PF07729 FCD domain FY129_18455 PF01232 Mannitol dehydrogenase Rossmann domain FY129_18455 PF08125 Mannitol dehydrogenase C-terminal domain FY129_18460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_18460 PF00005 ABC transporter FY129_18465 PF00005 ABC transporter FY129_18465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_18470 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_18470 PF00528 Binding-protein-dependent transport system inner membrane component FY129_18475 PF00528 Binding-protein-dependent transport system inner membrane component FY129_18480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_18485 PF00557 Metallopeptidase family M24 FY129_18485 PF01321 Creatinase/Prolidase N-terminal domain FY129_18490 PF00106 short chain dehydrogenase FY129_18520 PF00575 S1 RNA binding domain FY129_18525 PF02224 Cytidylate kinase FY129_18555 PF02445 Quinolinate synthetase A protein FY129_18560 PF00890 FAD binding domain FY129_18560 PF02910 Fumarate reductase flavoprotein C-term FY129_18565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY129_18565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY129_18585 PF08173 Membrane bound YbgT-like protein FY129_18590 PF02322 Cytochrome bd terminal oxidase subunit II FY129_18595 PF01654 Cytochrome bd terminal oxidase subunit I FY129_18600 PF00005 ABC transporter FY129_18600 PF00664 ABC transporter transmembrane region FY129_18605 PF00005 ABC transporter FY129_18605 PF00664 ABC transporter transmembrane region FY129_18615 PF08240 Alcohol dehydrogenase GroES-like domain FY129_18615 PF00107 Zinc-binding dehydrogenase FY129_18625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY129_18625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY129_18635 PF01037 Lrp/AsnC ligand binding domain FY129_18640 PF01177 Asp/Glu/Hydantoin racemase FY129_18655 PF00343 Carbohydrate phosphorylase FY129_18660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY129_18660 PF02806 Alpha amylase, C-terminal all-beta domain FY129_18660 PF00128 Alpha amylase, catalytic domain FY129_18665 PF00483 Nucleotidyl transferase FY129_18670 PF00534 Glycosyl transferases group 1 FY129_18670 PF08323 Starch synthase catalytic domain FY129_18675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY129_18675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY129_18675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY129_18675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY129_18680 PF18390 Glycogen debranching enzyme C-terminal domain FY129_18680 PF00128 Alpha amylase, catalytic domain FY129_18680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY129_18685 PF01575 MaoC like domain FY129_18710 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_18710 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY129_18710 PF01571 Aminomethyltransferase folate-binding domain FY129_18710 PF17806 Sarcosine oxidase A3 domain FY129_18725 PF01266 FAD dependent oxidoreductase FY129_18730 PF01165 Ribosomal protein S21 FY129_18745 PF11089 Exopolysaccharide production repressor FY129_18750 PF00535 Glycosyl transferase family 2 FY129_18755 PF04230 Polysaccharide pyruvyl transferase FY129_18760 PF00535 Glycosyl transferase family 2 FY129_18765 PF01943 Polysaccharide biosynthesis protein FY129_18770 PF01757 Acyltransferase family FY129_18775 PF00722 Glycosyl hydrolases family 16 FY129_18785 PF00535 Glycosyl transferase family 2 FY129_18790 PF00535 Glycosyl transferase family 2 FY129_18795 PF00535 Glycosyl transferase family 2 FY129_18800 PF00483 Nucleotidyl transferase FY129_18805 PF02706 Chain length determinant protein FY129_18805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY129_18805 PF13807 G-rich domain on putative tyrosine kinase FY129_18810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_18815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_18815 PF00072 Response regulator receiver domain FY129_18815 PF13426 PAS domain FY129_18830 PF00528 Binding-protein-dependent transport system inner membrane component FY129_18835 PF00005 ABC transporter FY129_18835 PF00571 CBS domain FY129_18840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY129_18840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_18845 PF01205 Uncharacterized protein family UPF0029 FY129_18850 PF00849 RNA pseudouridylate synthase FY129_18855 PF04445 Putative SAM-dependent methyltransferase FY129_18865 PF07995 Glucose / Sorbosone dehydrogenase FY129_18875 PF00196 Bacterial regulatory proteins, luxR family FY129_18875 PF00072 Response regulator receiver domain FY129_18880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_18880 PF07730 Histidine kinase FY129_18885 PF13407 Periplasmic binding protein domain FY129_18890 PF00005 ABC transporter FY129_18895 PF02653 Branched-chain amino acid transport system / permease component FY129_18905 PF08450 SMP-30/Gluconolactonase/LRE-like region FY129_18910 PF02631 RecX family FY129_18915 PF00034 Cytochrome c FY129_18925 PF00005 ABC transporter FY129_18930 PF01032 FecCD transport family FY129_18940 PF00593 TonB dependent receptor FY129_18940 PF07715 TonB-dependent Receptor Plug Domain FY129_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_18945 PF03466 LysR substrate binding domain FY129_18955 PF00884 Sulfatase FY129_18955 PF08019 Phosphoethanolamine transferase EptA/EptB FY129_18960 PF00486 Transcriptional regulatory protein, C terminal FY129_18960 PF00072 Response regulator receiver domain FY129_18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_18965 PF00512 His Kinase A (phospho-acceptor) domain FY129_18970 PF00083 Sugar (and other) transporter FY129_18975 PF07756 Protein of unknown function (DUF1612) FY129_18975 PF11972 HTH DNA binding domain FY129_18985 PF00211 Adenylate and Guanylate cyclase catalytic domain FY129_18985 PF00672 HAMP domain FY129_18995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_18995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_19000 PF00892 EamA-like transporter family FY129_19005 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY129_19010 PF00491 Arginase family FY129_19025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY129_19025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY129_19030 PF00202 Aminotransferase class-III FY129_19040 PF00155 Aminotransferase class I and II FY129_19045 PF06968 Biotin and Thiamin Synthesis associated domain FY129_19045 PF04055 Radical SAM superfamily FY129_19050 PF13673 Acetyltransferase (GNAT) domain FY129_19095 PF01569 PAP2 superfamily FY129_19100 PF00486 Transcriptional regulatory protein, C terminal FY129_19100 PF00072 Response regulator receiver domain FY129_19105 PF00512 His Kinase A (phospho-acceptor) domain FY129_19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_19105 PF00672 HAMP domain FY129_19115 PF07690 Major Facilitator Superfamily FY129_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19120 PF03466 LysR substrate binding domain FY129_19140 PF07969 Amidohydrolase family FY129_19155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19160 PF03466 LysR substrate binding domain FY129_19165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY129_19175 PF07690 Major Facilitator Superfamily FY129_19180 PF03466 LysR substrate binding domain FY129_19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19190 PF00535 Glycosyl transferase family 2 FY129_19200 PF03275 UDP-galactopyranose mutase FY129_19210 PF00672 HAMP domain FY129_19210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_19225 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19230 PF00005 ABC transporter FY129_19240 PF04303 PrpF protein FY129_19245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19245 PF03466 LysR substrate binding domain FY129_19250 PF01047 MarR family FY129_19280 PF00440 Bacterial regulatory proteins, tetR family FY129_19285 PF02311 AraC-like ligand binding domain FY129_19285 PF12833 Helix-turn-helix domain FY129_19300 PF13533 Biotin-lipoyl like FY129_19310 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19315 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_19325 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19330 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_19335 PF00005 ABC transporter FY129_19335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_19380 PF01979 Amidohydrolase family FY129_19385 PF01979 Amidohydrolase family FY129_19390 PF00221 Aromatic amino acid lyase FY129_19400 PF17391 Urocanase N-terminal domain FY129_19400 PF01175 Urocanase Rossmann-like domain FY129_19400 PF17392 Urocanase C-terminal domain FY129_19405 PF05962 HutD FY129_19410 PF07171 MlrC C-terminus FY129_19410 PF07364 Metallopeptidase family M81 FY129_19415 PF01168 Alanine racemase, N-terminal domain FY129_19415 PF14031 Putative serine dehydratase domain FY129_19420 PF01042 Endoribonuclease L-PSP FY129_19430 PF13614 AAA domain FY129_19435 PF02195 ParB-like nuclease domain FY129_19435 PF07506 RepB plasmid partitioning protein FY129_19440 PF11800 Replication protein C C-terminal region FY129_19440 PF03428 Replication protein C N-terminal domain FY129_19455 PF06772 Bacterial low temperature requirement A protein (LtrA) FY129_19460 PF00591 Glycosyl transferase family, a/b domain FY129_19460 PF02885 Glycosyl transferase family, helical bundle domain FY129_19465 PF07715 TonB-dependent Receptor Plug Domain FY129_19465 PF00593 TonB dependent receptor FY129_19470 PF00376 MerR family regulatory protein FY129_19470 PF09278 MerR, DNA binding FY129_19475 PF00128 Alpha amylase, catalytic domain FY129_19475 PF02806 Alpha amylase, C-terminal all-beta domain FY129_19480 PF02785 Biotin carboxylase C-terminal domain FY129_19480 PF00289 Biotin carboxylase, N-terminal domain FY129_19480 PF00364 Biotin-requiring enzyme FY129_19480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_19485 PF02682 Carboxyltransferase domain, subdomain C and D FY129_19490 PF07286 Protein of unknown function (DUF1445) FY129_19495 PF03746 LamB/YcsF family FY129_19500 PF01566 Natural resistance-associated macrophage protein FY129_19505 PF07729 FCD domain FY129_19505 PF00392 Bacterial regulatory proteins, gntR family FY129_19510 PF03861 ANTAR domain FY129_19510 PF08376 Nitrate and nitrite sensing FY129_19525 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19530 PF00005 ABC transporter FY129_19535 PF04324 BFD-like [2Fe-2S] binding domain FY129_19535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY129_19535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY129_19535 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_19535 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY129_19545 PF04324 BFD-like [2Fe-2S] binding domain FY129_19545 PF01568 Molydopterin dinucleotide binding domain FY129_19545 PF00384 Molybdopterin oxidoreductase FY129_19545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY129_19550 PF14824 Sirohaem biosynthesis protein central FY129_19550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY129_19550 PF10414 Sirohaem synthase dimerisation region FY129_19555 PF00455 DeoR C terminal sensor domain FY129_19555 PF08220 DeoR-like helix-turn-helix domain FY129_19560 PF01266 FAD dependent oxidoreductase FY129_19560 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY129_19565 PF00005 ABC transporter FY129_19565 PF08402 TOBE domain FY129_19570 PF00005 ABC transporter FY129_19570 PF17912 MalK OB fold domain FY129_19575 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19580 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_19595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_19600 PF03466 LysR substrate binding domain FY129_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19605 PF13593 SBF-like CPA transporter family (DUF4137) FY129_19610 PF00011 Hsp20/alpha crystallin family FY129_19625 PF00459 Inositol monophosphatase family FY129_19635 PF00072 Response regulator receiver domain FY129_19650 PF00005 ABC transporter FY129_19655 PF02653 Branched-chain amino acid transport system / permease component FY129_19665 PF00248 Aldo/keto reductase family FY129_19670 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY129_19670 PF01266 FAD dependent oxidoreductase FY129_19675 PF01791 DeoC/LacD family aldolase FY129_19680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY129_19680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY129_19685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_19685 PF00672 HAMP domain FY129_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19690 PF03466 LysR substrate binding domain FY129_19695 PF00106 short chain dehydrogenase FY129_19695 PF00300 Histidine phosphatase superfamily (branch 1) FY129_19700 PF00155 Aminotransferase class I and II FY129_19705 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19710 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19720 PF08402 TOBE domain FY129_19720 PF00005 ABC transporter FY129_19725 PF03746 LamB/YcsF family FY129_19730 PF02626 Carboxyltransferase domain, subdomain A and B FY129_19735 PF02682 Carboxyltransferase domain, subdomain C and D FY129_19745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_19745 PF00289 Biotin carboxylase, N-terminal domain FY129_19745 PF02785 Biotin carboxylase C-terminal domain FY129_19750 PF00364 Biotin-requiring enzyme FY129_19755 PF00892 EamA-like transporter family FY129_19760 PF00892 EamA-like transporter family FY129_19765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_19765 PF03466 LysR substrate binding domain FY129_19770 PF03401 Tripartite tricarboxylate transporter family receptor FY129_19775 PF03737 Aldolase/RraA FY129_19785 PF01970 Tripartite tricarboxylate transporter TctA family FY129_19790 PF01370 NAD dependent epimerase/dehydratase family FY129_19800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_19800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_19805 PF00106 short chain dehydrogenase FY129_19810 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19815 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19820 PF00005 ABC transporter FY129_19825 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_19830 PF03737 Aldolase/RraA FY129_19835 PF00107 Zinc-binding dehydrogenase FY129_19835 PF08240 Alcohol dehydrogenase GroES-like domain FY129_19850 PF01070 FMN-dependent dehydrogenase FY129_19855 PF14602 Hexapeptide repeat of succinyl-transferase FY129_19855 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY129_19855 PF00132 Bacterial transferase hexapeptide (six repeats) FY129_19865 PF01547 Bacterial extracellular solute-binding protein FY129_19875 PF00005 ABC transporter FY129_19875 PF17912 MalK OB fold domain FY129_19875 PF03459 TOBE domain FY129_19880 PF07470 Glycosyl Hydrolase Family 88 FY129_19885 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19890 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19905 PF00392 Bacterial regulatory proteins, gntR family FY129_19905 PF07729 FCD domain FY129_19910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_19910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_19915 PF12848 ABC transporter FY129_19915 PF00005 ABC transporter FY129_19925 PF01841 Transglutaminase-like superfamily FY129_19925 PF08379 Bacterial transglutaminase-like N-terminal region FY129_19930 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY129_19930 PF14403 Circularly permuted ATP-grasp type 2 FY129_19950 PF03061 Thioesterase superfamily FY129_19965 PF00392 Bacterial regulatory proteins, gntR family FY129_19965 PF07729 FCD domain FY129_19970 PF00465 Iron-containing alcohol dehydrogenase FY129_19975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY129_19985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_19990 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19995 PF00528 Binding-protein-dependent transport system inner membrane component FY129_19995 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_20000 PF00005 ABC transporter FY129_20000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_20005 PF00701 Dihydrodipicolinate synthetase family FY129_20020 PF03852 DNA mismatch endonuclease Vsr FY129_20025 PF00145 C-5 cytosine-specific DNA methylase FY129_20030 PF09126 Restriction endonuclease NaeI FY129_20110 PF01261 Xylose isomerase-like TIM barrel FY129_20115 PF01261 Xylose isomerase-like TIM barrel FY129_20120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_20120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_20125 PF01261 Xylose isomerase-like TIM barrel FY129_20130 PF00005 ABC transporter FY129_20135 PF02653 Branched-chain amino acid transport system / permease component FY129_20145 PF00356 Bacterial regulatory proteins, lacI family FY129_20150 PF00221 Aromatic amino acid lyase FY129_20155 PF00571 CBS domain FY129_20155 PF00005 ABC transporter FY129_20160 PF00528 Binding-protein-dependent transport system inner membrane component FY129_20175 PF00392 Bacterial regulatory proteins, gntR family FY129_20175 PF07702 UTRA domain FY129_20180 PF00440 Bacterial regulatory proteins, tetR family FY129_20180 PF13977 BetI-type transcriptional repressor, C-terminal FY129_20185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_20185 PF00529 HlyD membrane-fusion protein of T1SS FY129_20195 PF00873 AcrB/AcrD/AcrF family FY129_20200 PF07729 FCD domain FY129_20200 PF00392 Bacterial regulatory proteins, gntR family FY129_20205 PF10415 Fumarase C C-terminus FY129_20205 PF00206 Lyase FY129_20210 PF00324 Amino acid permease FY129_20215 PF17763 Glutaminase/Asparaginase C-terminal domain FY129_20215 PF00710 Asparaginase, N-terminal FY129_20225 PF03814 Potassium-transporting ATPase A subunit FY129_20235 PF02669 K+-transporting ATPase, c chain FY129_20240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_20240 PF00512 His Kinase A (phospho-acceptor) domain FY129_20240 PF02702 Osmosensitive K+ channel His kinase sensor domain FY129_20240 PF13493 Domain of unknown function (DUF4118) FY129_20240 PF13492 GAF domain FY129_20245 PF00072 Response regulator receiver domain FY129_20245 PF00486 Transcriptional regulatory protein, C terminal FY129_20250 PF01212 Beta-eliminating lyase FY129_20255 PF00310 Glutamine amidotransferases class-II FY129_20255 PF04898 Glutamate synthase central domain FY129_20255 PF01645 Conserved region in glutamate synthase FY129_20255 PF01493 GXGXG motif FY129_20265 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY129_20265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_20270 PF00512 His Kinase A (phospho-acceptor) domain FY129_20270 PF00672 HAMP domain FY129_20275 PF00486 Transcriptional regulatory protein, C terminal FY129_20275 PF00072 Response regulator receiver domain FY129_20285 PF13406 Transglycosylase SLT domain FY129_20290 PF00483 Nucleotidyl transferase FY129_20310 PF01380 SIS domain FY129_20310 PF00571 CBS domain FY129_20320 PF16200 C-terminal region of band_7 FY129_20320 PF01145 SPFH domain / Band 7 family FY129_20325 PF00762 Ferrochelatase FY129_20330 PF00149 Calcineurin-like phosphoesterase FY129_20330 PF02872 5'-nucleotidase, C-terminal domain FY129_20340 PF16653 Saccharopine dehydrogenase C-terminal domain FY129_20340 PF03435 Saccharopine dehydrogenase NADP binding domain FY129_20345 PF00990 Diguanylate cyclase, GGDEF domain FY129_20350 PF01063 Amino-transferase class IV FY129_20355 PF08439 Oligopeptidase F FY129_20355 PF01432 Peptidase family M3 FY129_20360 PF02954 Bacterial regulatory protein, Fis family FY129_20360 PF00072 Response regulator receiver domain FY129_20360 PF00158 Sigma-54 interaction domain FY129_20365 PF05951 Bacterial protein of unknown function (DUF882) FY129_20370 PF00224 Pyruvate kinase, barrel domain FY129_20370 PF02887 Pyruvate kinase, alpha/beta domain FY129_20390 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY129_20405 PF00444 Ribosomal protein L36 FY129_20410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY129_20410 PF02222 ATP-grasp domain FY129_20415 PF00731 AIR carboxylase FY129_20445 PF00459 Inositol monophosphatase family FY129_20455 PF00691 OmpA family FY129_20455 PF01389 OmpA-like transmembrane domain FY129_20465 PF00890 FAD binding domain FY129_20470 PF00005 ABC transporter FY129_20470 PF00664 ABC transporter transmembrane region FY129_20475 PF01197 Ribosomal protein L31 FY129_20495 PF00274 Fructose-bisphosphate aldolase class-I FY129_20500 PF00162 Phosphoglycerate kinase FY129_20505 PF00999 Sodium/hydrogen exchanger family FY129_20505 PF03471 Transporter associated domain FY129_20515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY129_20515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY129_20520 PF02779 Transketolase, pyrimidine binding domain FY129_20520 PF00456 Transketolase, thiamine diphosphate binding domain FY129_20520 PF02780 Transketolase, C-terminal domain FY129_20540 PF00571 CBS domain FY129_20540 PF03471 Transporter associated domain FY129_20540 PF01595 Cyclin M transmembrane N-terminal domain FY129_20550 PF13277 YmdB-like protein FY129_20565 PF01709 Transcriptional regulator FY129_20570 PF00296 Luciferase-like monooxygenase FY129_20575 PF00672 HAMP domain FY129_20575 PF02203 Tar ligand binding domain homologue FY129_20575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_20580 PF02075 Crossover junction endodeoxyribonuclease RuvC FY129_20585 PF07499 RuvA, C-terminal domain FY129_20585 PF01330 RuvA N terminal domain FY129_20590 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY129_20590 PF17864 RuvB AAA lid domain FY129_20590 PF05491 RuvB C-terminal winged helix domain FY129_20605 PF00293 NUDIX domain FY129_20610 PF00293 NUDIX domain FY129_20615 PF03061 Thioesterase superfamily FY129_20620 PF01618 MotA/TolQ/ExbB proton channel family FY129_20625 PF02472 Biopolymer transport protein ExbD/TolR FY129_20635 PF07676 WD40-like Beta Propeller Repeat FY129_20635 PF04052 TolB amino-terminal domain FY129_20640 PF00691 OmpA family FY129_20650 PF01171 PP-loop family FY129_20655 PF17862 AAA+ lid domain FY129_20655 PF06480 FtsH Extracellular FY129_20655 PF01434 Peptidase family M41 FY129_20655 PF00004 ATPase family associated with various cellular activities (AAA) FY129_20660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY129_20660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY129_20660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY129_20660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY129_20665 PF13505 Outer membrane protein beta-barrel domain FY129_20675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_20675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_20675 PF01842 ACT domain FY129_20715 PF00085 Thioredoxin FY129_20725 PF03966 Trm112p-like protein FY129_20730 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY129_20730 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY129_20730 PF00207 Alpha-2-macroglobulin family FY129_20730 PF07703 Alpha-2-macroglobulin bait region domain FY129_20730 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY129_20730 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY129_20730 PF07678 A-macroglobulin TED domain FY129_20730 PF17962 Bacterial macroglobulin domain 6 FY129_20730 PF01835 MG2 domain FY129_20735 PF00905 Penicillin binding protein transpeptidase domain FY129_20735 PF00912 Transglycosylase FY129_20735 PF06832 Penicillin-Binding Protein C-terminus Family FY129_20760 PF01555 DNA methylase FY129_20770 PF00712 DNA polymerase III beta subunit, N-terminal domain FY129_20770 PF02767 DNA polymerase III beta subunit, central domain FY129_20770 PF02768 DNA polymerase III beta subunit, C-terminal domain FY129_20835 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY129_20950 PF01906 Putative heavy-metal-binding FY129_21030 PF01546 Peptidase family M20/M25/M40 FY129_21030 PF07687 Peptidase dimerisation domain FY129_21035 PF07943 Penicillin-binding protein 5, C-terminal domain FY129_21035 PF00768 D-alanyl-D-alanine carboxypeptidase FY129_21040 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY129_21040 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY129_21045 PF01206 Sulfurtransferase TusA FY129_21045 PF00581 Rhodanese-like domain FY129_21050 PF03734 L,D-transpeptidase catalytic domain FY129_21055 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY129_21060 PF00589 Phage integrase family FY129_21060 PF02899 Phage integrase, N-terminal SAM-like domain FY129_21070 PF01202 Shikimate kinase FY129_21075 PF01761 3-dehydroquinate synthase FY129_21085 PF01722 BolA-like protein FY129_21090 PF00226 DnaJ domain FY129_21095 PF08406 CbbQ/NirQ/NorQ C-terminal FY129_21095 PF12556 Cobaltochelatase CobS subunit N terminal FY129_21095 PF07728 AAA domain (dynein-related subfamily) FY129_21100 PF06213 Cobalamin biosynthesis protein CobT FY129_21100 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY129_21115 PF02592 Putative vitamin uptake transporter FY129_21120 PF00830 Ribosomal L28 family FY129_21140 PF00753 Metallo-beta-lactamase superfamily FY129_21140 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY129_21145 PF01209 ubiE/COQ5 methyltransferase family FY129_21150 PF00155 Aminotransferase class I and II FY129_21155 PF02153 Prephenate dehydrogenase FY129_21165 PF04752 ChaC-like protein FY129_21185 PF00005 ABC transporter FY129_21195 PF00156 Phosphoribosyl transferase domain FY129_21200 PF00072 Response regulator receiver domain FY129_21210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY129_21210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY129_21220 PF00206 Lyase FY129_21220 PF14698 Argininosuccinate lyase C-terminal FY129_21225 PF08534 Redoxin FY129_21235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY129_21235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY129_21240 PF00766 Electron transfer flavoprotein FAD-binding domain FY129_21240 PF01012 Electron transfer flavoprotein domain FY129_21245 PF01012 Electron transfer flavoprotein domain FY129_21255 PF01923 Cobalamin adenosyltransferase FY129_21265 PF00106 short chain dehydrogenase FY129_21275 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY129_21280 PF12833 Helix-turn-helix domain FY129_21280 PF00730 HhH-GPD superfamily base excision DNA repair protein FY129_21280 PF06029 AlkA N-terminal domain FY129_21280 PF02805 Metal binding domain of Ada FY129_21285 PF09856 Predicted transcriptional regulator (DUF2083) FY129_21285 PF06114 IrrE N-terminal-like domain FY129_21285 PF01381 Helix-turn-helix FY129_21290 PF01039 Carboxyl transferase domain FY129_21295 PF02798 Glutathione S-transferase, N-terminal domain FY129_21310 PF02785 Biotin carboxylase C-terminal domain FY129_21310 PF00364 Biotin-requiring enzyme FY129_21310 PF00289 Biotin carboxylase, N-terminal domain FY129_21310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_21310 PF18140 Propionyl-coenzyme A carboxylase BT domain FY129_21315 PF01642 Methylmalonyl-CoA mutase FY129_21315 PF02310 B12 binding domain FY129_21325 PF01266 FAD dependent oxidoreductase FY129_21325 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY129_21335 PF13407 Periplasmic binding protein domain FY129_21340 PF02653 Branched-chain amino acid transport system / permease component FY129_21345 PF00005 ABC transporter FY129_21350 PF01717 Cobalamin-independent synthase, Catalytic domain FY129_21350 PF08267 Cobalamin-independent synthase, N-terminal domain FY129_21360 PF01381 Helix-turn-helix FY129_21375 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY129_21400 PF00480 ROK family FY129_21400 PF01047 MarR family FY129_21410 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21415 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21420 PF00005 ABC transporter FY129_21420 PF17912 MalK OB fold domain FY129_21420 PF03459 TOBE domain FY129_21425 PF03009 Glycerophosphoryl diester phosphodiesterase family FY129_21435 PF00722 Glycosyl hydrolases family 16 FY129_21435 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY129_21440 PF01272 Transcription elongation factor, GreA/GreB, C-term FY129_21440 PF03449 Transcription elongation factor, N-terminal FY129_21455 PF13439 Glycosyltransferase Family 4 FY129_21455 PF00534 Glycosyl transferases group 1 FY129_21460 PF00534 Glycosyl transferases group 1 FY129_21460 PF13439 Glycosyltransferase Family 4 FY129_21465 PF13579 Glycosyl transferase 4-like domain FY129_21465 PF00534 Glycosyl transferases group 1 FY129_21480 PF02706 Chain length determinant protein FY129_21480 PF13807 G-rich domain on putative tyrosine kinase FY129_21480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY129_21490 PF01757 Acyltransferase family FY129_21505 PF01943 Polysaccharide biosynthesis protein FY129_21565 PF01757 Acyltransferase family FY129_21570 PF00892 EamA-like transporter family FY129_21575 PF02810 SEC-C motif FY129_21575 PF07517 SecA DEAD-like domain FY129_21575 PF01043 SecA preprotein cross-linking domain FY129_21575 PF07516 SecA Wing and Scaffold domain FY129_21585 PF01960 ArgJ family FY129_21590 PF00583 Acetyltransferase (GNAT) family FY129_21590 PF13508 Acetyltransferase (GNAT) domain FY129_21595 PF00293 NUDIX domain FY129_21610 PF08241 Methyltransferase domain FY129_21620 PF00462 Glutaredoxin FY129_21625 PF00795 Carbon-nitrogen hydrolase FY129_21635 PF08241 Methyltransferase domain FY129_21650 PF00378 Enoyl-CoA hydratase/isomerase FY129_21660 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21665 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21670 PF00005 ABC transporter FY129_21675 PF08713 DNA alkylation repair enzyme FY129_21680 PF00171 Aldehyde dehydrogenase family FY129_21690 PF00563 EAL domain FY129_21690 PF00990 Diguanylate cyclase, GGDEF domain FY129_21690 PF08448 PAS fold FY129_21690 PF08447 PAS fold FY129_21700 PF00561 alpha/beta hydrolase fold FY129_21710 PF05336 L-rhamnose mutarotase FY129_21715 PF02653 Branched-chain amino acid transport system / permease component FY129_21720 PF02653 Branched-chain amino acid transport system / permease component FY129_21725 PF00005 ABC transporter FY129_21730 PF13407 Periplasmic binding protein domain FY129_21735 PF00455 DeoR C terminal sensor domain FY129_21735 PF08220 DeoR-like helix-turn-helix domain FY129_21740 PF00596 Class II Aldolase and Adducin N-terminal domain FY129_21745 PF01261 Xylose isomerase-like TIM barrel FY129_21750 PF02548 Ketopantoate hydroxymethyltransferase FY129_21755 PF02569 Pantoate-beta-alanine ligase FY129_21760 PF00378 Enoyl-CoA hydratase/isomerase FY129_21765 PF00682 HMGL-like FY129_21770 PF02785 Biotin carboxylase C-terminal domain FY129_21770 PF00289 Biotin carboxylase, N-terminal domain FY129_21770 PF00364 Biotin-requiring enzyme FY129_21770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_21775 PF01039 Carboxyl transferase domain FY129_21780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_21780 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_21780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_21785 PF01037 Lrp/AsnC ligand binding domain FY129_21790 PF02803 Thiolase, C-terminal domain FY129_21790 PF00108 Thiolase, N-terminal domain FY129_21795 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_21795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_21795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_21800 PF00676 Dehydrogenase E1 component FY129_21800 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY129_21805 PF02779 Transketolase, pyrimidine binding domain FY129_21805 PF02780 Transketolase, C-terminal domain FY129_21810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY129_21810 PF00364 Biotin-requiring enzyme FY129_21810 PF02817 e3 binding domain FY129_21815 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY129_21815 PF01676 Metalloenzyme superfamily FY129_21825 PF04143 Sulphur transport FY129_21835 PF04273 Putative phosphatase (DUF442) FY129_21835 PF00753 Metallo-beta-lactamase superfamily FY129_21845 PF00106 short chain dehydrogenase FY129_21850 PF00561 alpha/beta hydrolase fold FY129_21860 PF07729 FCD domain FY129_21860 PF00392 Bacterial regulatory proteins, gntR family FY129_21870 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21875 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21875 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_21880 PF00005 ABC transporter FY129_21880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_21885 PF00005 ABC transporter FY129_21885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_21890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_21900 PF13378 Enolase C-terminal domain-like FY129_21900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_21905 PF00296 Luciferase-like monooxygenase FY129_21910 PF00296 Luciferase-like monooxygenase FY129_21920 PF05368 NmrA-like family FY129_21925 PF00296 Luciferase-like monooxygenase FY129_21930 PF01546 Peptidase family M20/M25/M40 FY129_21930 PF07687 Peptidase dimerisation domain FY129_21935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_21945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_21950 PF00296 Luciferase-like monooxygenase FY129_21955 PF03466 LysR substrate binding domain FY129_21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_21965 PF00248 Aldo/keto reductase family FY129_21970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_21970 PF00005 ABC transporter FY129_21975 PF00005 ABC transporter FY129_21975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_21980 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21985 PF00528 Binding-protein-dependent transport system inner membrane component FY129_21990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_22000 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_22000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_22000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_22005 PF00296 Luciferase-like monooxygenase FY129_22015 PF00581 Rhodanese-like domain FY129_22030 PF00296 Luciferase-like monooxygenase FY129_22035 PF01613 Flavin reductase like domain FY129_22045 PF02082 Transcriptional regulator FY129_22050 PF00296 Luciferase-like monooxygenase FY129_22055 PF00296 Luciferase-like monooxygenase FY129_22060 PF01546 Peptidase family M20/M25/M40 FY129_22060 PF07687 Peptidase dimerisation domain FY129_22070 PF00005 ABC transporter FY129_22075 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_22085 PF03466 LysR substrate binding domain FY129_22085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_22095 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_22095 PF04324 BFD-like [2Fe-2S] binding domain FY129_22100 PF01266 FAD dependent oxidoreductase FY129_22105 PF01266 FAD dependent oxidoreductase FY129_22110 PF01037 Lrp/AsnC ligand binding domain FY129_22115 PF00005 ABC transporter FY129_22115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_22120 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22120 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_22125 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_22140 PF00202 Aminotransferase class-III FY129_22155 PF01266 FAD dependent oxidoreductase FY129_22160 PF00171 Aldehyde dehydrogenase family FY129_22165 PF00180 Isocitrate/isopropylmalate dehydrogenase FY129_22170 PF00171 Aldehyde dehydrogenase family FY129_22180 PF01968 Hydantoinase/oxoprolinase FY129_22180 PF05378 Hydantoinase/oxoprolinase N-terminal region FY129_22195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_22200 PF01546 Peptidase family M20/M25/M40 FY129_22200 PF07687 Peptidase dimerisation domain FY129_22215 PF01032 FecCD transport family FY129_22220 PF00005 ABC transporter FY129_22225 PF00127 Copper binding proteins, plastocyanin/azurin family FY129_22230 PF01209 ubiE/COQ5 methyltransferase family FY129_22245 PF01032 FecCD transport family FY129_22250 PF00005 ABC transporter FY129_22255 PF04542 Sigma-70 region 2 FY129_22255 PF08281 Sigma-70, region 4 FY129_22255 PF12680 SnoaL-like domain FY129_22275 PF00005 ABC transporter FY129_22275 PF00664 ABC transporter transmembrane region FY129_22280 PF00529 HlyD membrane-fusion protein of T1SS FY129_22280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_22290 PF07729 FCD domain FY129_22290 PF00392 Bacterial regulatory proteins, gntR family FY129_22295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_22295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_22300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_22300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_22305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_22305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_22315 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22320 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22325 PF00005 ABC transporter FY129_22325 PF17912 MalK OB fold domain FY129_22325 PF03459 TOBE domain FY129_22330 PF00920 Dehydratase family FY129_22335 PF01370 NAD dependent epimerase/dehydratase family FY129_22340 PF03737 Aldolase/RraA FY129_22345 PF00196 Bacterial regulatory proteins, luxR family FY129_22345 PF00072 Response regulator receiver domain FY129_22350 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22355 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_22355 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_22360 PF00005 ABC transporter FY129_22375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_22390 PF01112 Asparaginase FY129_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_22395 PF03466 LysR substrate binding domain FY129_22400 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22405 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22405 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_22410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_22410 PF00005 ABC transporter FY129_22420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_22425 PF01546 Peptidase family M20/M25/M40 FY129_22435 PF13407 Periplasmic binding protein domain FY129_22440 PF00005 ABC transporter FY129_22445 PF02653 Branched-chain amino acid transport system / permease component FY129_22450 PF07722 Peptidase C26 FY129_22455 PF03480 Bacterial extracellular solute-binding protein, family 7 FY129_22460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY129_22465 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY129_22480 PF01266 FAD dependent oxidoreductase FY129_22485 PF08447 PAS fold FY129_22485 PF13426 PAS domain FY129_22485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_22490 PF00296 Luciferase-like monooxygenase FY129_22495 PF03972 MmgE/PrpD family FY129_22500 PF00005 ABC transporter FY129_22505 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22510 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22515 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_22520 PF03949 Malic enzyme, NAD binding domain FY129_22520 PF00390 Malic enzyme, N-terminal domain FY129_22520 PF01515 Phosphate acetyl/butaryl transferase FY129_22525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_22525 PF03466 LysR substrate binding domain FY129_22530 PF01011 PQQ enzyme repeat FY129_22535 PF00483 Nucleotidyl transferase FY129_22535 PF01050 Mannose-6-phosphate isomerase FY129_22545 PF01547 Bacterial extracellular solute-binding protein FY129_22550 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22555 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22560 PF00005 ABC transporter FY129_22560 PF17912 MalK OB fold domain FY129_22570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_22570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_22575 PF06508 Queuosine biosynthesis protein QueC FY129_22580 PF01242 6-pyruvoyl tetrahydropterin synthase FY129_22585 PF04055 Radical SAM superfamily FY129_22590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_22590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_22600 PF00005 ABC transporter FY129_22600 PF03459 TOBE domain FY129_22600 PF17912 MalK OB fold domain FY129_22605 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22610 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22615 PF01547 Bacterial extracellular solute-binding protein FY129_22620 PF00356 Bacterial regulatory proteins, lacI family FY129_22635 PF02245 Methylpurine-DNA glycosylase (MPG) FY129_22655 PF03734 L,D-transpeptidase catalytic domain FY129_22655 PF17969 L,D-transpeptidase C-terminal domain FY129_22660 PF00672 HAMP domain FY129_22660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_22665 PF00202 Aminotransferase class-III FY129_22675 PF02397 Bacterial sugar transferase FY129_22680 PF02563 Polysaccharide biosynthesis/export protein FY129_22695 PF00529 HlyD membrane-fusion protein of T1SS FY129_22700 PF00664 ABC transporter transmembrane region FY129_22700 PF00005 ABC transporter FY129_22715 PF00196 Bacterial regulatory proteins, luxR family FY129_22715 PF00072 Response regulator receiver domain FY129_22725 PF01370 NAD dependent epimerase/dehydratase family FY129_22730 PF16363 GDP-mannose 4,6 dehydratase FY129_22760 PF07238 PilZ domain FY129_22760 PF00535 Glycosyl transferase family 2 FY129_22760 PF03552 Cellulose synthase FY129_22770 PF01270 Glycosyl hydrolases family 8 FY129_22780 PF01546 Peptidase family M20/M25/M40 FY129_22780 PF07687 Peptidase dimerisation domain FY129_22795 PF00202 Aminotransferase class-III FY129_22800 PF00375 Sodium:dicarboxylate symporter family FY129_22805 PF00512 His Kinase A (phospho-acceptor) domain FY129_22805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_22810 PF02954 Bacterial regulatory protein, Fis family FY129_22810 PF00158 Sigma-54 interaction domain FY129_22810 PF00072 Response regulator receiver domain FY129_22825 PF01266 FAD dependent oxidoreductase FY129_22830 PF01168 Alanine racemase, N-terminal domain FY129_22830 PF00842 Alanine racemase, C-terminal domain FY129_22835 PF01037 Lrp/AsnC ligand binding domain FY129_22840 PF08543 Phosphomethylpyrimidine kinase FY129_22845 PF02581 Thiamine monophosphate synthase FY129_22850 PF02110 Hydroxyethylthiazole kinase family FY129_22855 PF09084 NMT1/THI5 like FY129_22860 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22870 PF01055 Glycosyl hydrolases family 31 FY129_22875 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22880 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22885 PF01547 Bacterial extracellular solute-binding protein FY129_22890 PF08402 TOBE domain FY129_22890 PF00005 ABC transporter FY129_22895 PF00392 Bacterial regulatory proteins, gntR family FY129_22895 PF07702 UTRA domain FY129_22900 PF00296 Luciferase-like monooxygenase FY129_22905 PF00248 Aldo/keto reductase family FY129_22910 PF01613 Flavin reductase like domain FY129_22925 PF00873 AcrB/AcrD/AcrF family FY129_22935 PF02563 Polysaccharide biosynthesis/export protein FY129_22940 PF13439 Glycosyltransferase Family 4 FY129_22940 PF00534 Glycosyl transferases group 1 FY129_22945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_22950 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22955 PF00528 Binding-protein-dependent transport system inner membrane component FY129_22955 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_22960 PF01979 Amidohydrolase family FY129_22975 PF03841 L-seryl-tRNA selenium transferase FY129_22980 PF00005 ABC transporter FY129_22980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_22985 PF00043 Glutathione S-transferase, C-terminal domain FY129_22985 PF02798 Glutathione S-transferase, N-terminal domain FY129_23000 PF00296 Luciferase-like monooxygenase FY129_23005 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY129_23005 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY129_23010 PF03480 Bacterial extracellular solute-binding protein, family 7 FY129_23020 PF00171 Aldehyde dehydrogenase family FY129_23030 PF03786 D-mannonate dehydratase (UxuA) FY129_23035 PF00107 Zinc-binding dehydrogenase FY129_23035 PF08240 Alcohol dehydrogenase GroES-like domain FY129_23040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY129_23050 PF03480 Bacterial extracellular solute-binding protein, family 7 FY129_23055 PF07729 FCD domain FY129_23055 PF00392 Bacterial regulatory proteins, gntR family FY129_23060 PF13419 Haloacid dehalogenase-like hydrolase FY129_23065 PF05209 Septum formation inhibitor MinC, N-terminal domain FY129_23065 PF03775 Septum formation inhibitor MinC, C-terminal domain FY129_23070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY129_23075 PF03776 Septum formation topological specificity factor MinE FY129_23080 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_23090 PF08448 PAS fold FY129_23090 PF08447 PAS fold FY129_23090 PF00990 Diguanylate cyclase, GGDEF domain FY129_23090 PF00563 EAL domain FY129_23095 PF01425 Amidase FY129_23105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_23115 PF01547 Bacterial extracellular solute-binding protein FY129_23120 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23125 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23130 PF03459 TOBE domain FY129_23130 PF00005 ABC transporter FY129_23130 PF17912 MalK OB fold domain FY129_23140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_23140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_23150 PF05161 MOFRL family FY129_23150 PF13660 Domain of unknown function (DUF4147) FY129_23170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY129_23170 PF14579 Helix-hairpin-helix motif FY129_23170 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY129_23170 PF02811 PHP domain FY129_23170 PF01336 OB-fold nucleic acid binding domain FY129_23175 PF01209 ubiE/COQ5 methyltransferase family FY129_23185 PF07690 Major Facilitator Superfamily FY129_23190 PF07729 FCD domain FY129_23190 PF00392 Bacterial regulatory proteins, gntR family FY129_23195 PF02653 Branched-chain amino acid transport system / permease component FY129_23200 PF02653 Branched-chain amino acid transport system / permease component FY129_23205 PF00005 ABC transporter FY129_23210 PF13407 Periplasmic binding protein domain FY129_23215 PF00920 Dehydratase family FY129_23225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_23230 PF12833 Helix-turn-helix domain FY129_23240 PF00266 Aminotransferase class-V FY129_23245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_23245 PF00005 ABC transporter FY129_23250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_23250 PF00005 ABC transporter FY129_23255 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23260 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_23270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY129_23270 PF17854 FtsK alpha domain FY129_23270 PF09397 Ftsk gamma domain FY129_23270 PF01580 FtsK/SpoIIIE family FY129_23275 PF02615 Malate/L-lactate dehydrogenase FY129_23280 PF00563 EAL domain FY129_23280 PF08448 PAS fold FY129_23280 PF00990 Diguanylate cyclase, GGDEF domain FY129_23280 PF08447 PAS fold FY129_23290 PF07883 Cupin domain FY129_23290 PF05899 Protein of unknown function (DUF861) FY129_23295 PF17151 Periplasmic sensor domain FY129_23295 PF00990 Diguanylate cyclase, GGDEF domain FY129_23300 PF00529 HlyD membrane-fusion protein of T1SS FY129_23300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_23305 PF00873 AcrB/AcrD/AcrF family FY129_23310 PF08361 MAATS-type transcriptional repressor, C-terminal region FY129_23310 PF00440 Bacterial regulatory proteins, tetR family FY129_23315 PF00005 ABC transporter FY129_23320 PF02653 Branched-chain amino acid transport system / permease component FY129_23325 PF13407 Periplasmic binding protein domain FY129_23330 PF03466 LysR substrate binding domain FY129_23330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_23335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY129_23335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY129_23355 PF03922 OmpW family FY129_23365 PF00005 ABC transporter FY129_23365 PF08402 TOBE domain FY129_23370 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23375 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23380 PF13416 Bacterial extracellular solute-binding protein FY129_23385 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY129_23385 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY129_23400 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY129_23400 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY129_23405 PF00005 ABC transporter FY129_23410 PF00950 ABC 3 transport family FY129_23415 PF01297 Zinc-uptake complex component A periplasmic FY129_23420 PF00583 Acetyltransferase (GNAT) family FY129_23435 PF01053 Cys/Met metabolism PLP-dependent enzyme FY129_23440 PF01547 Bacterial extracellular solute-binding protein FY129_23445 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23450 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23455 PF00005 ABC transporter FY129_23455 PF17912 MalK OB fold domain FY129_23460 PF08402 TOBE domain FY129_23460 PF00005 ABC transporter FY129_23465 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23470 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23475 PF08013 Tagatose 6 phosphate kinase FY129_23480 PF00294 pfkB family carbohydrate kinase FY129_23495 PF08240 Alcohol dehydrogenase GroES-like domain FY129_23495 PF16912 Glucose dehydrogenase C-terminus FY129_23500 PF00356 Bacterial regulatory proteins, lacI family FY129_23505 PF07690 Major Facilitator Superfamily FY129_23510 PF12833 Helix-turn-helix domain FY129_23510 PF02311 AraC-like ligand binding domain FY129_23520 PF13416 Bacterial extracellular solute-binding protein FY129_23525 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23530 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23535 PF00005 ABC transporter FY129_23535 PF17912 MalK OB fold domain FY129_23540 PF00248 Aldo/keto reductase family FY129_23555 PF00392 Bacterial regulatory proteins, gntR family FY129_23555 PF07729 FCD domain FY129_23560 PF01370 NAD dependent epimerase/dehydratase family FY129_23565 PF04962 KduI/IolB family FY129_23575 PF00701 Dihydrodipicolinate synthetase family FY129_23580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_23580 PF13378 Enolase C-terminal domain-like FY129_23585 PF04909 Amidohydrolase FY129_23590 PF02311 AraC-like ligand binding domain FY129_23590 PF12833 Helix-turn-helix domain FY129_23595 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23600 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23605 PF08402 TOBE domain FY129_23605 PF00005 ABC transporter FY129_23615 PF00295 Glycosyl hydrolases family 28 FY129_23620 PF07470 Glycosyl Hydrolase Family 88 FY129_23625 PF00550 Phosphopantetheine attachment site FY129_23645 PF01165 Ribosomal protein S21 FY129_23655 PF00313 'Cold-shock' DNA-binding domain FY129_23660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_23660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_23675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_23675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_23680 PF17938 Tetracyclin repressor-like, C-terminal domain FY129_23680 PF00440 Bacterial regulatory proteins, tetR family FY129_23685 PF13416 Bacterial extracellular solute-binding protein FY129_23690 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23695 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23700 PF00005 ABC transporter FY129_23700 PF03459 TOBE domain FY129_23700 PF17912 MalK OB fold domain FY129_23715 PF01261 Xylose isomerase-like TIM barrel FY129_23720 PF01842 ACT domain FY129_23720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY129_23720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY129_23730 PF00356 Bacterial regulatory proteins, lacI family FY129_23745 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY129_23750 PF00005 ABC transporter FY129_23750 PF17912 MalK OB fold domain FY129_23760 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23765 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23770 PF00005 ABC transporter FY129_23775 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23780 PF09084 NMT1/THI5 like FY129_23785 PF00296 Luciferase-like monooxygenase FY129_23795 PF00005 ABC transporter FY129_23795 PF17912 MalK OB fold domain FY129_23800 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23805 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23810 PF13416 Bacterial extracellular solute-binding protein FY129_23820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY129_23820 PF13426 PAS domain FY129_23820 PF08447 PAS fold FY129_23845 PF08402 TOBE domain FY129_23845 PF00005 ABC transporter FY129_23855 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23860 PF00528 Binding-protein-dependent transport system inner membrane component FY129_23865 PF01177 Asp/Glu/Hydantoin racemase FY129_23905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_23905 PF03466 LysR substrate binding domain FY129_23910 PF00144 Beta-lactamase FY129_23920 PF00860 Permease family FY129_23930 PF07690 Major Facilitator Superfamily FY129_23935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_23935 PF00512 His Kinase A (phospho-acceptor) domain FY129_23935 PF00989 PAS fold FY129_23935 PF16736 Single Cache-like FY129_23940 PF00486 Transcriptional regulatory protein, C terminal FY129_23940 PF00072 Response regulator receiver domain FY129_23945 PF00529 HlyD membrane-fusion protein of T1SS FY129_23945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_23950 PF00873 AcrB/AcrD/AcrF family FY129_23955 PF13460 NAD(P)H-binding FY129_23965 PF01494 FAD binding domain FY129_23970 PF02308 MgtC family FY129_23980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY129_23985 PF00873 AcrB/AcrD/AcrF family FY129_23990 PF13520 Amino acid permease FY129_23995 PF13520 Amino acid permease FY129_24010 PF01594 AI-2E family transporter FY129_24035 PF01037 Lrp/AsnC ligand binding domain FY129_24060 PF00501 AMP-binding enzyme FY129_24060 PF13193 AMP-binding enzyme C-terminal domain FY129_24070 PF09339 IclR helix-turn-helix domain FY129_24070 PF01614 Bacterial transcriptional regulator FY129_24080 PF03480 Bacterial extracellular solute-binding protein, family 7 FY129_24080 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY129_24085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY129_24090 PF04199 Putative cyclase FY129_24095 PF01494 FAD binding domain FY129_24100 PF00190 Cupin FY129_24110 PF00072 Response regulator receiver domain FY129_24110 PF00196 Bacterial regulatory proteins, luxR family FY129_24115 PF00072 Response regulator receiver domain FY129_24115 PF00196 Bacterial regulatory proteins, luxR family FY129_24120 PF00072 Response regulator receiver domain FY129_24120 PF13426 PAS domain FY129_24120 PF08448 PAS fold FY129_24120 PF00512 His Kinase A (phospho-acceptor) domain FY129_24120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_24125 PF00384 Molybdopterin oxidoreductase FY129_24130 PF00210 Ferritin-like domain FY129_24135 PF00561 alpha/beta hydrolase fold FY129_24145 PF06441 Epoxide hydrolase N terminus FY129_24150 PF00171 Aldehyde dehydrogenase family FY129_24155 PF02566 OsmC-like protein FY129_24160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_24160 PF00672 HAMP domain FY129_24160 PF00512 His Kinase A (phospho-acceptor) domain FY129_24165 PF00486 Transcriptional regulatory protein, C terminal FY129_24165 PF00072 Response regulator receiver domain FY129_24170 PF00561 alpha/beta hydrolase fold FY129_24180 PF17991 Thioredoxin like C-terminal domain FY129_24180 PF02683 Cytochrome C biogenesis protein transmembrane region FY129_24180 PF00578 AhpC/TSA family FY129_24190 PF07690 Major Facilitator Superfamily FY129_24195 PF00990 Diguanylate cyclase, GGDEF domain FY129_24205 PF00005 ABC transporter FY129_24205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_24215 PF00300 Histidine phosphatase superfamily (branch 1) FY129_24215 PF00106 short chain dehydrogenase FY129_24220 PF01266 FAD dependent oxidoreductase FY129_24225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_24230 PF00528 Binding-protein-dependent transport system inner membrane component FY129_24235 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_24235 PF00528 Binding-protein-dependent transport system inner membrane component FY129_24240 PF01266 FAD dependent oxidoreductase FY129_24255 PF13649 Methyltransferase domain FY129_24260 PF00999 Sodium/hydrogen exchanger family FY129_24265 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY129_24270 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY129_24275 PF00459 Inositol monophosphatase family FY129_24290 PF01546 Peptidase family M20/M25/M40 FY129_24295 PF00455 DeoR C terminal sensor domain FY129_24295 PF08220 DeoR-like helix-turn-helix domain FY129_24300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_24300 PF00005 ABC transporter FY129_24305 PF00528 Binding-protein-dependent transport system inner membrane component FY129_24305 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_24310 PF00528 Binding-protein-dependent transport system inner membrane component FY129_24315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_24320 PF00465 Iron-containing alcohol dehydrogenase FY129_24325 PF00795 Carbon-nitrogen hydrolase FY129_24330 PF00005 ABC transporter FY129_24330 PF09383 NIL domain FY129_24335 PF00005 ABC transporter FY129_24335 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_24345 PF02653 Branched-chain amino acid transport system / permease component FY129_24350 PF13458 Periplasmic binding protein FY129_24375 PF00376 MerR family regulatory protein FY129_24375 PF13614 AAA domain FY129_24380 PF07506 RepB plasmid partitioning protein FY129_24380 PF02195 ParB-like nuclease domain FY129_24385 PF11800 Replication protein C C-terminal region FY129_24385 PF03428 Replication protein C N-terminal domain FY129_24395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_24395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_24400 PF00005 ABC transporter FY129_24405 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_24410 PF00356 Bacterial regulatory proteins, lacI family FY129_24445 PF00487 Fatty acid desaturase FY129_24455 PF00313 'Cold-shock' DNA-binding domain FY129_24490 PF02810 SEC-C motif FY129_24490 PF01043 SecA preprotein cross-linking domain FY129_24490 PF07516 SecA Wing and Scaffold domain FY129_24490 PF07517 SecA DEAD-like domain FY129_24530 PF13087 AAA domain FY129_24530 PF13091 PLD-like domain FY129_24565 PF00512 His Kinase A (phospho-acceptor) domain FY129_24565 PF00989 PAS fold FY129_24565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY129_24570 PF00664 ABC transporter transmembrane region FY129_24570 PF00005 ABC transporter FY129_24580 PF01022 Bacterial regulatory protein, arsR family FY129_24610 PF01965 DJ-1/PfpI family FY129_24610 PF12833 Helix-turn-helix domain FY129_24615 PF07690 Major Facilitator Superfamily FY129_24620 PF07690 Major Facilitator Superfamily FY129_24625 PF01047 MarR family FY129_24640 PF07690 Major Facilitator Superfamily FY129_24670 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY129_24675 PF00561 alpha/beta hydrolase fold FY129_24685 PF04752 ChaC-like protein FY129_24690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_24690 PF03466 LysR substrate binding domain FY129_24705 PF00011 Hsp20/alpha crystallin family FY129_24750 PF04956 TrbC/VIRB2 family FY129_24755 PF05101 Type IV secretory pathway, VirB3-like protein FY129_24760 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY129_24765 PF07996 Type IV secretion system proteins FY129_24775 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY129_24785 PF04335 VirB8 protein FY129_24790 PF03524 Conjugal transfer protein FY129_24795 PF03743 Bacterial conjugation TrbI-like protein FY129_24800 PF00437 Type II/IV secretion system protein FY129_24820 PF03230 Antirestriction protein FY129_24900 PF05406 WGR domain FY129_24915 PF02534 Type IV secretory system Conjugative DNA transfer FY129_24930 PF03389 MobA/MobL family FY129_24930 PF01443 Viral (Superfamily 1) RNA helicase FY129_24930 PF17841 BID domain of Bartonella effector protein (Bep) FY129_24940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_24940 PF03466 LysR substrate binding domain FY129_24965 PF03472 Autoinducer binding domain FY129_24965 PF00196 Bacterial regulatory proteins, luxR family FY129_24970 PF00765 Autoinducer synthase FY129_24980 PF00072 Response regulator receiver domain FY129_24980 PF00486 Transcriptional regulatory protein, C terminal FY129_25005 PF00795 Carbon-nitrogen hydrolase FY129_25015 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY129_25020 PF08402 TOBE domain FY129_25020 PF00005 ABC transporter FY129_25025 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25030 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25045 PF13635 Domain of unknown function (DUF4143) FY129_25045 PF13173 AAA domain FY129_25050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY129_25050 PF02436 Conserved carboxylase domain FY129_25050 PF02785 Biotin carboxylase C-terminal domain FY129_25050 PF00364 Biotin-requiring enzyme FY129_25050 PF00682 HMGL-like FY129_25050 PF00289 Biotin carboxylase, N-terminal domain FY129_25055 PF14552 Tautomerase enzyme FY129_25060 PF03328 HpcH/HpaI aldolase/citrate lyase family FY129_25065 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY129_25075 PF09339 IclR helix-turn-helix domain FY129_25075 PF01614 Bacterial transcriptional regulator FY129_25085 PF00005 ABC transporter FY129_25090 PF00005 ABC transporter FY129_25100 PF02653 Branched-chain amino acid transport system / permease component FY129_25100 PF11862 Domain of unknown function (DUF3382) FY129_25120 PF00682 HMGL-like FY129_25120 PF08502 LeuA allosteric (dimerisation) domain FY129_25125 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25130 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25135 PF01047 MarR family FY129_25135 PF00480 ROK family FY129_25140 PF00128 Alpha amylase, catalytic domain FY129_25145 PF07687 Peptidase dimerisation domain FY129_25145 PF01546 Peptidase family M20/M25/M40 FY129_25150 PF01261 Xylose isomerase-like TIM barrel FY129_25155 PF00005 ABC transporter FY129_25155 PF17912 MalK OB fold domain FY129_25165 PF00480 ROK family FY129_25170 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25175 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25180 PF01547 Bacterial extracellular solute-binding protein FY129_25185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY129_25185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY129_25200 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY129_25215 PF00005 ABC transporter FY129_25220 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25225 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25230 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_25235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_25235 PF00005 ABC transporter FY129_25240 PF00005 ABC transporter FY129_25240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_25245 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25245 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_25250 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_25260 PF03737 Aldolase/RraA FY129_25265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_25265 PF03466 LysR substrate binding domain FY129_25270 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY129_25275 PF01546 Peptidase family M20/M25/M40 FY129_25275 PF07687 Peptidase dimerisation domain FY129_25280 PF01156 Inosine-uridine preferring nucleoside hydrolase FY129_25300 PF00857 Isochorismatase family FY129_25315 PF02678 Pirin FY129_25315 PF17954 Quercetinase C-terminal cupin domain FY129_25320 PF03358 NADPH-dependent FMN reductase FY129_25325 PF00561 alpha/beta hydrolase fold FY129_25345 PF13533 Biotin-lipoyl like FY129_25350 PF03466 LysR substrate binding domain FY129_25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_25355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY129_25360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_25360 PF03466 LysR substrate binding domain FY129_25375 PF00857 Isochorismatase family FY129_25380 PF03466 LysR substrate binding domain FY129_25380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_25390 PF03551 Transcriptional regulator PadR-like family FY129_25450 PF02653 Branched-chain amino acid transport system / permease component FY129_25455 PF00005 ABC transporter FY129_25460 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_25460 PF00005 ABC transporter FY129_25470 PF14525 AraC-binding-like domain FY129_25470 PF12833 Helix-turn-helix domain FY129_25530 PF07729 FCD domain FY129_25530 PF00392 Bacterial regulatory proteins, gntR family FY129_25535 PF04444 Catechol dioxygenase N terminus FY129_25535 PF00775 Dioxygenase FY129_25540 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY129_25545 PF03328 HpcH/HpaI aldolase/citrate lyase family FY129_25555 PF01571 Aminomethyltransferase folate-binding domain FY129_25560 PF02219 Methylenetetrahydrofolate reductase FY129_25565 PF00551 Formyl transferase FY129_25575 PF00107 Zinc-binding dehydrogenase FY129_25575 PF08240 Alcohol dehydrogenase GroES-like domain FY129_25585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY129_25585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_25585 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_25585 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY129_25590 PF00378 Enoyl-CoA hydratase/isomerase FY129_25595 PF13193 AMP-binding enzyme C-terminal domain FY129_25595 PF00501 AMP-binding enzyme FY129_25600 PF00171 Aldehyde dehydrogenase family FY129_25605 PF07690 Major Facilitator Superfamily FY129_25620 PF17158 Membrane-associated sensor, integral membrane domain FY129_25620 PF00990 Diguanylate cyclase, GGDEF domain FY129_25640 PF12802 MarR family FY129_25650 PF13458 Periplasmic binding protein FY129_25655 PF02653 Branched-chain amino acid transport system / permease component FY129_25665 PF00005 ABC transporter FY129_25665 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_25670 PF00005 ABC transporter FY129_25680 PF00171 Aldehyde dehydrogenase family FY129_25685 PF01546 Peptidase family M20/M25/M40 FY129_25685 PF07687 Peptidase dimerisation domain FY129_25690 PF00202 Aminotransferase class-III FY129_25695 PF00171 Aldehyde dehydrogenase family FY129_25700 PF08450 SMP-30/Gluconolactonase/LRE-like region FY129_25705 PF01261 Xylose isomerase-like TIM barrel FY129_25710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY129_25710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY129_25730 PF01979 Amidohydrolase family FY129_25735 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY129_25735 PF00480 ROK family FY129_25740 PF02653 Branched-chain amino acid transport system / permease component FY129_25745 PF13407 Periplasmic binding protein domain FY129_25750 PF00005 ABC transporter FY129_25770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_25770 PF03466 LysR substrate binding domain FY129_25775 PF07690 Major Facilitator Superfamily FY129_25785 PF00135 Carboxylesterase family FY129_25795 PF00135 Carboxylesterase family FY129_25805 PF00005 ABC transporter FY129_25810 PF02653 Branched-chain amino acid transport system / permease component FY129_25815 PF00135 Carboxylesterase family FY129_25825 PF04303 PrpF protein FY129_25830 PF03737 Aldolase/RraA FY129_25835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY129_25840 PF02585 GlcNAc-PI de-N-acetylase FY129_25855 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY129_25855 PF00005 ABC transporter FY129_25860 PF00005 ABC transporter FY129_25865 PF13458 Periplasmic binding protein FY129_25875 PF03466 LysR substrate binding domain FY129_25875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_25880 PF01614 Bacterial transcriptional regulator FY129_25880 PF09339 IclR helix-turn-helix domain FY129_25890 PF13378 Enolase C-terminal domain-like FY129_25890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY129_25900 PF08402 TOBE domain FY129_25900 PF00005 ABC transporter FY129_25905 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25910 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25920 PF07690 Major Facilitator Superfamily FY129_25955 PF03928 Haem-degrading FY129_25975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_25980 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25985 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_25985 PF00528 Binding-protein-dependent transport system inner membrane component FY129_25990 PF00005 ABC transporter FY129_25990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26000 PF00296 Luciferase-like monooxygenase FY129_26010 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26015 PF00005 ABC transporter FY129_26020 PF00732 GMC oxidoreductase FY129_26020 PF05199 GMC oxidoreductase FY129_26025 PF00171 Aldehyde dehydrogenase family FY129_26040 PF00392 Bacterial regulatory proteins, gntR family FY129_26040 PF07729 FCD domain FY129_26045 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_26045 PF04324 BFD-like [2Fe-2S] binding domain FY129_26055 PF01266 FAD dependent oxidoreductase FY129_26065 PF01958 Domain of unknown function DUF108 FY129_26065 PF03447 Homoserine dehydrogenase, NAD binding domain FY129_26070 PF01042 Endoribonuclease L-PSP FY129_26075 PF01548 Transposase FY129_26075 PF02371 Transposase IS116/IS110/IS902 family FY129_26115 PF00857 Isochorismatase family FY129_26125 PF00440 Bacterial regulatory proteins, tetR family FY129_26130 PF00005 ABC transporter FY129_26135 PF01032 FecCD transport family FY129_26140 PF01032 FecCD transport family FY129_26150 PF00394 Multicopper oxidase FY129_26150 PF07731 Multicopper oxidase FY129_26150 PF07732 Multicopper oxidase FY129_26150 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY129_26155 PF02885 Glycosyl transferase family, helical bundle domain FY129_26155 PF00591 Glycosyl transferase family, a/b domain FY129_26160 PF07715 TonB-dependent Receptor Plug Domain FY129_26160 PF00593 TonB dependent receptor FY129_26195 PF03551 Transcriptional regulator PadR-like family FY129_26230 PF07731 Multicopper oxidase FY129_26230 PF07732 Multicopper oxidase FY129_26230 PF00394 Multicopper oxidase FY129_26250 PF01209 ubiE/COQ5 methyltransferase family FY129_26265 PF04079 Segregation and condensation complex subunit ScpB FY129_26275 PF00589 Phage integrase family FY129_26285 PF13614 AAA domain FY129_26290 PF07506 RepB plasmid partitioning protein FY129_26290 PF02195 ParB-like nuclease domain FY129_26295 PF11800 Replication protein C C-terminal region FY129_26295 PF03428 Replication protein C N-terminal domain FY129_26305 PF07756 Protein of unknown function (DUF1612) FY129_26305 PF11972 HTH DNA binding domain FY129_26325 PF08808 RES domain FY129_26345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_26345 PF03466 LysR substrate binding domain FY129_26355 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26360 PF00005 ABC transporter FY129_26365 PF09084 NMT1/THI5 like FY129_26370 PF00296 Luciferase-like monooxygenase FY129_26375 PF00296 Luciferase-like monooxygenase FY129_26385 PF05199 GMC oxidoreductase FY129_26385 PF00732 GMC oxidoreductase FY129_26390 PF00561 alpha/beta hydrolase fold FY129_26410 PF02653 Branched-chain amino acid transport system / permease component FY129_26415 PF00005 ABC transporter FY129_26425 PF00753 Metallo-beta-lactamase superfamily FY129_26430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY129_26430 PF02770 Acyl-CoA dehydrogenase, middle domain FY129_26430 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY129_26435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_26440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26440 PF00005 ABC transporter FY129_26445 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26445 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_26450 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26460 PF00296 Luciferase-like monooxygenase FY129_26465 PF00296 Luciferase-like monooxygenase FY129_26470 PF03466 LysR substrate binding domain FY129_26470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_26480 PF01434 Peptidase family M41 FY129_26480 PF00004 ATPase family associated with various cellular activities (AAA) FY129_26480 PF17862 AAA+ lid domain FY129_26495 PF00664 ABC transporter transmembrane region FY129_26495 PF00005 ABC transporter FY129_26500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26500 PF00005 ABC transporter FY129_26505 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_26505 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26510 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_26525 PF01261 Xylose isomerase-like TIM barrel FY129_26535 PF13298 DNA polymerase Ligase (LigD) FY129_26535 PF01068 ATP dependent DNA ligase domain FY129_26535 PF04679 ATP dependent DNA ligase C terminal region FY129_26550 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY129_26550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY129_26550 PF14579 Helix-hairpin-helix motif FY129_26550 PF02811 PHP domain FY129_26595 PF17762 HTH domain found in ParB protein FY129_26595 PF02195 ParB-like nuclease domain FY129_26620 PF13362 Toprim domain FY129_26620 PF18818 Metallopeptidase superfamily domain FY129_26620 PF08401 Domain of unknown function (DUF1738) FY129_26635 PF01850 PIN domain FY129_26640 PF05284 Protein of unknown function (DUF736) FY129_26645 PF00216 Bacterial DNA-binding protein FY129_26660 PF02534 Type IV secretory system Conjugative DNA transfer FY129_26665 PF06412 Conjugal transfer protein TraD FY129_26670 PF07820 TraC-like protein FY129_26680 PF10502 Signal peptidase, peptidase S26 FY129_26685 PF00795 Carbon-nitrogen hydrolase FY129_26690 PF06871 TraH_2 FY129_26695 PF09228 Prokaryotic Transcriptional repressor TraM FY129_26705 PF00384 Molybdopterin oxidoreductase FY129_26705 PF01568 Molydopterin dinucleotide binding domain FY129_26710 PF00005 ABC transporter FY129_26710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26715 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26715 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_26720 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26725 PF00296 Luciferase-like monooxygenase FY129_26730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_26735 PF13454 FAD-NAD(P)-binding FY129_26740 PF00296 Luciferase-like monooxygenase FY129_26745 PF00440 Bacterial regulatory proteins, tetR family FY129_26750 PF00196 Bacterial regulatory proteins, luxR family FY129_26750 PF03472 Autoinducer binding domain FY129_26755 PF00128 Alpha amylase, catalytic domain FY129_26765 PF02690 Na+/Pi-cotransporter FY129_26785 PF00459 Inositol monophosphatase family FY129_26790 PF03009 Glycerophosphoryl diester phosphodiesterase family FY129_26795 PF03009 Glycerophosphoryl diester phosphodiesterase family FY129_26800 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_26800 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26805 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26810 PF00005 ABC transporter FY129_26810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26815 PF00005 ABC transporter FY129_26815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_26825 PF00455 DeoR C terminal sensor domain FY129_26825 PF08220 DeoR-like helix-turn-helix domain FY129_26830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_26835 PF08220 DeoR-like helix-turn-helix domain FY129_26835 PF00455 DeoR C terminal sensor domain FY129_26850 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26850 PF12911 N-terminal TM domain of oligopeptide transport permease C FY129_26855 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26860 PF03009 Glycerophosphoryl diester phosphodiesterase family FY129_26865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26865 PF00005 ABC transporter FY129_26870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY129_26870 PF00005 ABC transporter FY129_26875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY129_26880 PF00300 Histidine phosphatase superfamily (branch 1) FY129_26885 PF00325 Bacterial regulatory proteins, crp family FY129_26885 PF04198 Putative sugar-binding domain FY129_26890 PF03472 Autoinducer binding domain FY129_26890 PF00196 Bacterial regulatory proteins, luxR family FY129_26900 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY129_26905 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY129_26910 PF00491 Arginase family FY129_26915 PF04324 BFD-like [2Fe-2S] binding domain FY129_26915 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY129_26925 PF01266 FAD dependent oxidoreductase FY129_26930 PF05378 Hydantoinase/oxoprolinase N-terminal region FY129_26930 PF01968 Hydantoinase/oxoprolinase FY129_26940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_26940 PF03466 LysR substrate binding domain FY129_26945 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26950 PF00528 Binding-protein-dependent transport system inner membrane component FY129_26955 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY129_26960 PF00005 ABC transporter FY129_26965 PF03466 LysR substrate binding domain FY129_26965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY129_26970 PF03743 Bacterial conjugation TrbI-like protein FY129_26980 PF03524 Conjugal transfer protein FY129_26985 PF04335 VirB8 protein FY129_26990 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY129_26995 PF10907 Protein of unknown function (DUF2749) FY129_27005 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY129_27010 PF05101 Type IV secretory pathway, VirB3-like protein FY129_27015 PF04956 TrbC/VIRB2 family FY129_27020 PF00437 Type II/IV secretion system protein