locus-tag class description FY132_00005 PF00308 Bacterial dnaA protein FY132_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY132_00005 PF11638 DnaA N-terminal domain FY132_00010 PF06969 HemN C-terminal domain FY132_00010 PF04055 Radical SAM superfamily FY132_00015 PF01725 Ham1 family FY132_00020 PF01138 3' exoribonuclease family, domain 1 FY132_00020 PF03725 3' exoribonuclease family, domain 2 FY132_00025 PF01628 HrcA protein C terminal domain FY132_00030 PF01025 GrpE FY132_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY132_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY132_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY132_00045 PF04552 Sigma-54, DNA binding domain FY132_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY132_00045 PF04963 Sigma-54 factor, core binding domain FY132_00050 PF00005 ABC transporter FY132_00055 PF03968 OstA-like protein FY132_00065 PF01343 Peptidase family S49 FY132_00070 PF00216 Bacterial DNA-binding protein FY132_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY132_00080 PF17785 PUA-like domain FY132_00085 PF00588 SpoU rRNA Methylase family FY132_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY132_00090 PF01252 Signal peptidase (SPase) II FY132_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY132_00095 PF01627 Hpt domain FY132_00095 PF00072 Response regulator receiver domain FY132_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_00095 PF00512 His Kinase A (phospho-acceptor) domain FY132_00095 PF00672 HAMP domain FY132_00105 PF01624 MutS domain I FY132_00105 PF05188 MutS domain II FY132_00105 PF05192 MutS domain III FY132_00105 PF05190 MutS family domain IV FY132_00105 PF00488 MutS domain V FY132_00110 PF01842 ACT domain FY132_00110 PF08335 GlnD PII-uridylyltransferase FY132_00110 PF01966 HD domain FY132_00110 PF01909 Nucleotidyltransferase domain FY132_00115 PF03023 Lipid II flippase MurJ FY132_00125 PF00579 tRNA synthetases class I (W and Y) FY132_00135 PF01106 NifU-like domain FY132_00140 PF00814 Glycoprotease family FY132_00150 PF01475 Ferric uptake regulator family FY132_00155 PF01553 Acyltransferase FY132_00160 PF04055 Radical SAM superfamily FY132_00160 PF01938 TRAM domain FY132_00160 PF00919 Uncharacterized protein family UPF0004 FY132_00165 PF02562 PhoH-like protein FY132_00170 PF02130 Uncharacterized protein family UPF0054 FY132_00175 PF00571 CBS domain FY132_00175 PF03471 Transporter associated domain FY132_00180 PF00795 Carbon-nitrogen hydrolase FY132_00185 PF01381 Helix-turn-helix FY132_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY132_00190 PF02772 S-adenosylmethionine synthetase, central domain FY132_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY132_00195 PF02390 Putative methyltransferase FY132_00200 PF00294 pfkB family carbohydrate kinase FY132_00205 PF02646 RmuC family FY132_00210 PF01327 Polypeptide deformylase FY132_00215 PF02911 Formyl transferase, C-terminal domain FY132_00215 PF00551 Formyl transferase FY132_00220 PF01416 tRNA pseudouridine synthase FY132_00230 PF07687 Peptidase dimerisation domain FY132_00230 PF01546 Peptidase family M20/M25/M40 FY132_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY132_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY132_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_00245 PF00672 HAMP domain FY132_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY132_00255 PF00011 Hsp20/alpha crystallin family FY132_00280 PF00696 Amino acid kinase family FY132_00290 PF01926 50S ribosome-binding GTPase FY132_00295 PF14849 YidC periplasmic domain FY132_00295 PF02096 60Kd inner membrane protein FY132_00300 PF00825 Ribonuclease P FY132_00305 PF00468 Ribosomal protein L34 FY132_00310 PF00672 HAMP domain FY132_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_00315 PF00512 His Kinase A (phospho-acceptor) domain FY132_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_00325 PF01209 ubiE/COQ5 methyltransferase family FY132_00330 PF00005 ABC transporter FY132_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY132_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY132_00350 PF00149 Calcineurin-like phosphoesterase FY132_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY132_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY132_00365 PF05544 Proline racemase FY132_00370 PF01979 Amidohydrolase family FY132_00375 PF00156 Phosphoribosyl transferase domain FY132_00380 PF00294 pfkB family carbohydrate kinase FY132_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY132_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY132_00400 PF00342 Phosphoglucose isomerase FY132_00405 PF00501 AMP-binding enzyme FY132_00405 PF13193 AMP-binding enzyme C-terminal domain FY132_00410 PF00005 ABC transporter FY132_00410 PF08402 TOBE domain FY132_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY132_00425 PF00593 TonB dependent receptor FY132_00425 PF07715 TonB-dependent Receptor Plug Domain FY132_00445 PF01679 Proteolipid membrane potential modulator FY132_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY132_00475 PF00512 His Kinase A (phospho-acceptor) domain FY132_00475 PF16736 Single Cache-like FY132_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_00475 PF00989 PAS fold FY132_00480 PF12849 PBP superfamily domain FY132_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY132_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY132_00495 PF00005 ABC transporter FY132_00500 PF01895 PhoU domain FY132_00505 PF00072 Response regulator receiver domain FY132_00505 PF00486 Transcriptional regulatory protein, C terminal FY132_00515 PF00202 Aminotransferase class-III FY132_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY132_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY132_00525 PF01430 Hsp33 protein FY132_00530 PF04379 ApaG domain FY132_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY132_00545 PF00692 dUTPase FY132_00605 PF10548 P22AR C-terminal domain FY132_00605 PF08346 AntA/AntB antirepressor FY132_00645 PF06689 ClpX C4-type zinc finger FY132_00645 PF10431 C-terminal, D2-small domain, of ClpB protein FY132_00645 PF07724 AAA domain (Cdc48 subfamily) FY132_00700 PF03592 Terminase small subunit FY132_00700 PF10668 Phage terminase small subunit FY132_00825 PF13356 Arm DNA-binding domain FY132_00825 PF00589 Phage integrase family FY132_00835 PF00239 Resolvase, N terminal domain FY132_00835 PF02796 Helix-turn-helix domain of resolvase FY132_00850 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FY132_00870 PF08671 Anti-repressor SinI FY132_00870 PF01381 Helix-turn-helix FY132_00910 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY132_00915 PF00230 Major intrinsic protein FY132_00955 PF00196 Bacterial regulatory proteins, luxR family FY132_00955 PF00072 Response regulator receiver domain FY132_00965 PF01180 Dihydroorotate dehydrogenase FY132_01000 PF02082 Transcriptional regulator FY132_01005 PF00270 DEAD/DEAH box helicase FY132_01005 PF08494 DEAD/H associated FY132_01005 PF00271 Helicase conserved C-terminal domain FY132_01025 PF01925 Sulfite exporter TauE/SafE FY132_01035 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_01035 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY132_01035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_01035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_01040 PF02803 Thiolase, C-terminal domain FY132_01040 PF00108 Thiolase, N-terminal domain FY132_01045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY132_01045 PF00378 Enoyl-CoA hydratase/isomerase FY132_01045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY132_01070 PF03334 Na+/H+ antiporter subunit FY132_01075 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY132_01080 PF01899 Na+/H+ ion antiporter subunit FY132_01085 PF00361 Proton-conducting membrane transporter FY132_01090 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY132_01095 PF00361 Proton-conducting membrane transporter FY132_01095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY132_01095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY132_01095 PF13244 Domain of unknown function (DUF4040) FY132_01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_01115 PF00072 Response regulator receiver domain FY132_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_01120 PF01584 CheW-like domain FY132_01120 PF02895 Signal transducing histidine kinase, homodimeric domain FY132_01120 PF01627 Hpt domain FY132_01125 PF01739 CheR methyltransferase, SAM binding domain FY132_01125 PF03705 CheR methyltransferase, all-alpha domain FY132_01130 PF00072 Response regulator receiver domain FY132_01130 PF01339 CheB methylesterase FY132_01135 PF00072 Response regulator receiver domain FY132_01140 PF03975 CheD chemotactic sensory transduction FY132_01150 PF08345 Flagellar M-ring protein C-terminal FY132_01150 PF01514 Secretory protein of YscJ/FliF family FY132_01155 PF00196 Bacterial regulatory proteins, luxR family FY132_01155 PF03472 Autoinducer binding domain FY132_01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_01165 PF00672 HAMP domain FY132_01170 PF00672 HAMP domain FY132_01170 PF00072 Response regulator receiver domain FY132_01170 PF01627 Hpt domain FY132_01170 PF00512 His Kinase A (phospho-acceptor) domain FY132_01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_01175 PF01741 Large-conductance mechanosensitive channel, MscL FY132_01180 PF00155 Aminotransferase class I and II FY132_01185 PF01370 NAD dependent epimerase/dehydratase family FY132_01195 PF03884 DNA gyrase inhibitor YacG FY132_01200 PF02545 Maf-like protein FY132_01205 PF01176 Translation initiation factor 1A / IF-1 FY132_01215 PF06793 Uncharacterised protein family (UPF0262) FY132_01220 PF00815 Histidinol dehydrogenase FY132_01230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY132_01245 PF00700 Bacterial flagellin C-terminal helical region FY132_01245 PF00669 Bacterial flagellin N-terminal helical region FY132_01250 PF00700 Bacterial flagellin C-terminal helical region FY132_01250 PF00669 Bacterial flagellin N-terminal helical region FY132_01255 PF00669 Bacterial flagellin N-terminal helical region FY132_01255 PF00700 Bacterial flagellin C-terminal helical region FY132_01260 PF00813 FliP family FY132_01270 PF02107 Flagellar L-ring protein FY132_01280 PF02119 Flagellar P-ring protein FY132_01285 PF13144 Chaperone for flagella basal body P-ring formation FY132_01290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY132_01290 PF00460 Flagella basal body rod protein FY132_01295 PF02049 Flagellar hook-basal body complex protein FliE FY132_01300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY132_01305 PF00460 Flagella basal body rod protein FY132_01315 PF18269 T3SS EscN ATPase C-terminal domain FY132_01315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY132_01320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY132_01320 PF00460 Flagella basal body rod protein FY132_01330 PF01618 MotA/TolQ/ExbB proton channel family FY132_01335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY132_01340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY132_01345 PF14842 FliG N-terminal domain FY132_01345 PF14841 FliG middle domain FY132_01345 PF01706 FliG C-terminal domain FY132_01350 PF01312 FlhB HrpN YscU SpaS Family FY132_01360 PF00669 Bacterial flagellin N-terminal helical region FY132_01360 PF00700 Bacterial flagellin C-terminal helical region FY132_01370 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY132_01370 PF00691 OmpA family FY132_01380 PF02120 Flagellar hook-length control protein FliK FY132_01390 PF00486 Transcriptional regulatory protein, C terminal FY132_01395 PF07559 Flagellar basal body protein FlaE FY132_01395 PF00460 Flagella basal body rod protein FY132_01395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY132_01415 PF07378 Flagellar protein FlbT FY132_01420 PF03963 Flagellar hook capping protein - N-terminal region FY132_01425 PF01313 Bacterial export proteins, family 3 FY132_01430 PF00771 FHIPEP family FY132_01435 PF01311 Bacterial export proteins, family 1 FY132_01470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY132_01470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY132_01475 PF00356 Bacterial regulatory proteins, lacI family FY132_01480 PF01547 Bacterial extracellular solute-binding protein FY132_01485 PF00528 Binding-protein-dependent transport system inner membrane component FY132_01490 PF00528 Binding-protein-dependent transport system inner membrane component FY132_01495 PF00128 Alpha amylase, catalytic domain FY132_01500 PF00005 ABC transporter FY132_01500 PF17912 MalK OB fold domain FY132_01500 PF03459 TOBE domain FY132_01515 PF00920 Dehydratase family FY132_01520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY132_01525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY132_01525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY132_01530 PF01266 FAD dependent oxidoreductase FY132_01535 PF00120 Glutamine synthetase, catalytic domain FY132_01560 PF00463 Isocitrate lyase family FY132_01565 PF09856 Predicted transcriptional regulator (DUF2083) FY132_01565 PF06114 IrrE N-terminal-like domain FY132_01565 PF01381 Helix-turn-helix FY132_01570 PF13416 Bacterial extracellular solute-binding protein FY132_01575 PF08402 TOBE domain FY132_01575 PF00005 ABC transporter FY132_01580 PF00528 Binding-protein-dependent transport system inner membrane component FY132_01585 PF00528 Binding-protein-dependent transport system inner membrane component FY132_01600 PF13426 PAS domain FY132_01600 PF13188 PAS domain FY132_01600 PF00989 PAS fold FY132_01600 PF00512 His Kinase A (phospho-acceptor) domain FY132_01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_01610 PF02541 Ppx/GppA phosphatase family FY132_01615 PF01728 FtsJ-like methyltransferase FY132_01620 PF07690 Major Facilitator Superfamily FY132_01625 PF00753 Metallo-beta-lactamase superfamily FY132_01630 PF00478 IMP dehydrogenase / GMP reductase domain FY132_01630 PF00571 CBS domain FY132_01640 PF00107 Zinc-binding dehydrogenase FY132_01640 PF08240 Alcohol dehydrogenase GroES-like domain FY132_01645 PF01738 Dienelactone hydrolase family FY132_01650 PF00994 Probable molybdopterin binding domain FY132_01655 PF08544 GHMP kinases C terminal FY132_01655 PF00288 GHMP kinases N terminal domain FY132_01665 PF00348 Polyprenyl synthetase FY132_01680 PF01343 Peptidase family S49 FY132_01680 PF06965 Na+/H+ antiporter 1 FY132_01690 PF02091 Glycyl-tRNA synthetase alpha subunit FY132_01700 PF04011 LemA family FY132_01705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY132_01715 PF05746 DALR anticodon binding domain FY132_01715 PF02092 Glycyl-tRNA synthetase beta subunit FY132_01720 PF04463 Protein of unknown function (DUF523) FY132_01725 PF17200 Single Cache domain 2 FY132_01725 PF00672 HAMP domain FY132_01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_01735 PF02844 Phosphoribosylglycinamide synthetase, N domain FY132_01735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY132_01735 PF02843 Phosphoribosylglycinamide synthetase, C domain FY132_01740 PF16921 Tex protein YqgF-like domain FY132_01740 PF00575 S1 RNA binding domain FY132_01740 PF17674 HHH domain FY132_01740 PF09371 Tex-like protein N-terminal domain FY132_01755 PF01040 UbiA prenyltransferase family FY132_01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_01770 PF03466 LysR substrate binding domain FY132_01780 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY132_01785 PF04452 RNA methyltransferase FY132_01790 PF01384 Phosphate transporter family FY132_01800 PF05116 Sucrose-6F-phosphate phosphohydrolase FY132_01805 PF13439 Glycosyltransferase Family 4 FY132_01805 PF00534 Glycosyl transferases group 1 FY132_01810 PF07729 FCD domain FY132_01810 PF00392 Bacterial regulatory proteins, gntR family FY132_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_01820 PF03466 LysR substrate binding domain FY132_01825 PF01565 FAD binding domain FY132_01825 PF02913 FAD linked oxidases, C-terminal domain FY132_01830 PF02913 FAD linked oxidases, C-terminal domain FY132_01830 PF01565 FAD binding domain FY132_01835 PF13183 4Fe-4S dicluster domain FY132_01835 PF02754 Cysteine-rich domain FY132_01845 PF17969 L,D-transpeptidase C-terminal domain FY132_01845 PF03734 L,D-transpeptidase catalytic domain FY132_01850 PF03352 Methyladenine glycosylase FY132_01860 PF03601 Conserved hypothetical protein 698 FY132_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_01865 PF03466 LysR substrate binding domain FY132_01895 PF03129 Anticodon binding domain FY132_01895 PF13393 Histidyl-tRNA synthetase FY132_01905 PF13393 Histidyl-tRNA synthetase FY132_01910 PF01634 ATP phosphoribosyltransferase FY132_01915 PF07681 DoxX FY132_01925 PF00118 TCP-1/cpn60 chaperonin family FY132_01930 PF00166 Chaperonin 10 Kd subunit FY132_01940 PF06574 FAD synthetase FY132_01940 PF01687 Riboflavin kinase FY132_01945 PF08264 Anticodon-binding domain of tRNA FY132_01945 PF00133 tRNA synthetases class I (I, L, M and V) FY132_01955 PF14437 MafB19-like deaminase FY132_01960 PF00849 RNA pseudouridylate synthase FY132_01960 PF01479 S4 domain FY132_01970 PF01734 Patatin-like phospholipase FY132_01975 PF00999 Sodium/hydrogen exchanger family FY132_01975 PF02254 TrkA-N domain FY132_01980 PF01523 Putative modulator of DNA gyrase FY132_01985 PF00459 Inositol monophosphatase family FY132_01995 PF00534 Glycosyl transferases group 1 FY132_01995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY132_02005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY132_02015 PF01119 DNA mismatch repair protein, C-terminal domain FY132_02015 PF08676 MutL C terminal dimerisation domain FY132_02020 PF00486 Transcriptional regulatory protein, C terminal FY132_02020 PF00072 Response regulator receiver domain FY132_02025 PF13188 PAS domain FY132_02025 PF03707 Bacterial signalling protein N terminal repeat FY132_02025 PF00990 Diguanylate cyclase, GGDEF domain FY132_02025 PF00563 EAL domain FY132_02030 PF08450 SMP-30/Gluconolactonase/LRE-like region FY132_02035 PF01081 KDPG and KHG aldolase FY132_02040 PF05035 2-keto-3-deoxy-galactonokinase FY132_02050 PF09339 IclR helix-turn-helix domain FY132_02050 PF01614 Bacterial transcriptional regulator FY132_02055 PF03472 Autoinducer binding domain FY132_02055 PF00196 Bacterial regulatory proteins, luxR family FY132_02065 PF10609 NUBPL iron-transfer P-loop NTPase FY132_02070 PF01544 CorA-like Mg2+ transporter protein FY132_02075 PF02705 K+ potassium transporter FY132_02090 PF00119 ATP synthase A chain FY132_02095 PF00137 ATP synthase subunit C FY132_02100 PF00430 ATP synthase B/B' CF(0) FY132_02105 PF00430 ATP synthase B/B' CF(0) FY132_02110 PF09828 Chromate resistance exported protein FY132_02115 PF02417 Chromate transporter FY132_02120 PF01351 Ribonuclease HII FY132_02135 PF01565 FAD binding domain FY132_02135 PF02913 FAD linked oxidases, C-terminal domain FY132_02140 PF01300 Telomere recombination FY132_02140 PF03481 Putative GTP-binding controlling metal-binding FY132_02150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY132_02150 PF00355 Rieske [2Fe-2S] domain FY132_02155 PF00175 Oxidoreductase NAD-binding domain FY132_02155 PF00111 2Fe-2S iron-sulfur cluster binding domain FY132_02155 PF00970 Oxidoreductase FAD-binding domain FY132_02160 PF07886 BA14K-like protein FY132_02165 PF07886 BA14K-like protein FY132_02175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_02175 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY132_02175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_02175 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_02190 PF05958 tRNA (Uracil-5-)-methyltransferase FY132_02195 PF01728 FtsJ-like methyltransferase FY132_02195 PF01479 S4 domain FY132_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_02200 PF02203 Tar ligand binding domain homologue FY132_02200 PF00672 HAMP domain FY132_02210 PF01037 Lrp/AsnC ligand binding domain FY132_02235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY132_02235 PF02779 Transketolase, pyrimidine binding domain FY132_02235 PF02780 Transketolase, C-terminal domain FY132_02240 PF02678 Pirin FY132_02240 PF05726 Pirin C-terminal cupin domain FY132_02245 PF02609 Exonuclease VII small subunit FY132_02250 PF00850 Histone deacetylase domain FY132_02255 PF02632 BioY family FY132_02260 PF02361 Cobalt transport protein FY132_02265 PF00005 ABC transporter FY132_02270 PF06224 Winged helix DNA-binding domain FY132_02275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY132_02275 PF00925 GTP cyclohydrolase II FY132_02280 PF01264 Chorismate synthase FY132_02295 PF00300 Histidine phosphatase superfamily (branch 1) FY132_02305 PF00684 DnaJ central domain FY132_02305 PF00226 DnaJ domain FY132_02305 PF01556 DnaJ C terminal domain FY132_02315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY132_02315 PF01243 Pyridoxamine 5'-phosphate oxidase FY132_02335 PF13419 Haloacid dehalogenase-like hydrolase FY132_02345 PF01523 Putative modulator of DNA gyrase FY132_02355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY132_02355 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY132_02360 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY132_02365 PF01040 UbiA prenyltransferase family FY132_02370 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY132_02375 PF00510 Cytochrome c oxidase subunit III FY132_02385 PF02104 SURF1 family FY132_02390 PF02401 LytB protein FY132_02395 PF01636 Phosphotransferase enzyme family FY132_02400 PF00075 RNase H FY132_02410 PF00462 Glutaredoxin FY132_02410 PF08534 Redoxin FY132_02420 PF02622 Uncharacterized ACR, COG1678 FY132_02425 PF05532 CsbD-like FY132_02430 PF15887 Putative zinc-binding metallo-peptidase FY132_02430 PF10005 zinc-ribbon domain FY132_02435 PF03707 Bacterial signalling protein N terminal repeat FY132_02435 PF00990 Diguanylate cyclase, GGDEF domain FY132_02435 PF13188 PAS domain FY132_02435 PF00563 EAL domain FY132_02440 PF13302 Acetyltransferase (GNAT) domain FY132_02445 PF05193 Peptidase M16 inactive domain FY132_02445 PF00675 Insulinase (Peptidase family M16) FY132_02450 PF14821 Threonine synthase N terminus FY132_02450 PF00291 Pyridoxal-phosphate dependent enzyme FY132_02470 PF13419 Haloacid dehalogenase-like hydrolase FY132_02475 PF07729 FCD domain FY132_02475 PF00392 Bacterial regulatory proteins, gntR family FY132_02490 PF01555 DNA methylase FY132_02490 PF18755 Restriction Enzyme Adenine Methylase Associated FY132_02495 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY132_02500 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY132_02510 PF00730 HhH-GPD superfamily base excision DNA repair protein FY132_02510 PF14815 NUDIX domain FY132_02525 PF13462 Thioredoxin FY132_02530 PF02463 RecF/RecN/SMC N terminal domain FY132_02535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_02540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY132_02540 PF02896 PEP-utilising enzyme, TIM barrel domain FY132_02540 PF00391 PEP-utilising enzyme, mobile domain FY132_02550 PF00375 Sodium:dicarboxylate symporter family FY132_02575 PF06039 Malate:quinone oxidoreductase (Mqo) FY132_02590 PF00009 Elongation factor Tu GTP binding domain FY132_02595 PF01507 Phosphoadenosine phosphosulfate reductase family FY132_02600 PF01507 Phosphoadenosine phosphosulfate reductase family FY132_02605 PF02082 Transcriptional regulator FY132_02615 PF00528 Binding-protein-dependent transport system inner membrane component FY132_02620 PF00528 Binding-protein-dependent transport system inner membrane component FY132_02625 PF00005 ABC transporter FY132_02625 PF12857 TOBE-like domain FY132_02630 PF00698 Acyl transferase domain FY132_02630 PF08240 Alcohol dehydrogenase GroES-like domain FY132_02630 PF16197 Ketoacyl-synthetase C-terminal extension FY132_02630 PF00109 Beta-ketoacyl synthase, N-terminal domain FY132_02630 PF02801 Beta-ketoacyl synthase, C-terminal domain FY132_02630 PF08659 KR domain FY132_02630 PF00550 Phosphopantetheine attachment site FY132_02630 PF14765 Polyketide synthase dehydratase FY132_02630 PF00107 Zinc-binding dehydrogenase FY132_02635 PF00563 EAL domain FY132_02635 PF01590 GAF domain FY132_02635 PF00990 Diguanylate cyclase, GGDEF domain FY132_02635 PF00989 PAS fold FY132_02645 PF13977 BetI-type transcriptional repressor, C-terminal FY132_02645 PF00440 Bacterial regulatory proteins, tetR family FY132_02650 PF00171 Aldehyde dehydrogenase family FY132_02655 PF05199 GMC oxidoreductase FY132_02655 PF00732 GMC oxidoreductase FY132_02685 PF00043 Glutathione S-transferase, C-terminal domain FY132_02685 PF02798 Glutathione S-transferase, N-terminal domain FY132_02695 PF07690 Major Facilitator Superfamily FY132_02705 PF05973 Phage derived protein Gp49-like (DUF891) FY132_02715 PF04679 ATP dependent DNA ligase C terminal region FY132_02715 PF01068 ATP dependent DNA ligase domain FY132_02715 PF04675 DNA ligase N terminus FY132_02725 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY132_02730 PF00403 Heavy-metal-associated domain FY132_02735 PF03734 L,D-transpeptidase catalytic domain FY132_02735 PF17969 L,D-transpeptidase C-terminal domain FY132_02740 PF03734 L,D-transpeptidase catalytic domain FY132_02740 PF17969 L,D-transpeptidase C-terminal domain FY132_02745 PF01047 MarR family FY132_02750 PF02566 OsmC-like protein FY132_02765 PF00005 ABC transporter FY132_02765 PF12848 ABC transporter FY132_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_02795 PF03466 LysR substrate binding domain FY132_02800 PF00106 short chain dehydrogenase FY132_02815 PF05872 Bacterial protein of unknown function (DUF853) FY132_02825 PF01638 HxlR-like helix-turn-helix FY132_02830 PF00106 short chain dehydrogenase FY132_02835 PF12833 Helix-turn-helix domain FY132_02845 PF00248 Aldo/keto reductase family FY132_02850 PF01062 Bestrophin, RFP-TM, chloride channel FY132_02855 PF13280 WYL domain FY132_02855 PF08279 HTH domain FY132_02870 PF01063 Amino-transferase class IV FY132_02875 PF00672 HAMP domain FY132_02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_02880 PF03466 LysR substrate binding domain FY132_02895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY132_02895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY132_02910 PF01810 LysE type translocator FY132_02915 PF01322 Cytochrome C' FY132_02920 PF00034 Cytochrome c FY132_02950 PF00561 alpha/beta hydrolase fold FY132_02955 PF09278 MerR, DNA binding FY132_02955 PF00376 MerR family regulatory protein FY132_02965 PF02583 Metal-sensitive transcriptional repressor FY132_02980 PF00005 ABC transporter FY132_02980 PF00571 CBS domain FY132_02985 PF00528 Binding-protein-dependent transport system inner membrane component FY132_02995 PF00326 Prolyl oligopeptidase family FY132_02995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY132_03005 PF00701 Dihydrodipicolinate synthetase family FY132_03015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY132_03015 PF12833 Helix-turn-helix domain FY132_03015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY132_03015 PF02805 Metal binding domain of Ada FY132_03020 PF01594 AI-2E family transporter FY132_03025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_03045 PF03006 Haemolysin-III related FY132_03055 PF01810 LysE type translocator FY132_03060 PF01641 SelR domain FY132_03065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY132_03065 PF13244 Domain of unknown function (DUF4040) FY132_03065 PF00361 Proton-conducting membrane transporter FY132_03070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY132_03075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY132_03080 PF00361 Proton-conducting membrane transporter FY132_03085 PF01899 Na+/H+ ion antiporter subunit FY132_03090 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY132_03095 PF03334 Na+/H+ antiporter subunit FY132_03100 PF05443 ROS/MUCR transcriptional regulator protein FY132_03115 PF02657 Fe-S metabolism associated domain FY132_03120 PF17264 Family of unknown function (DUF5330) FY132_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_03125 PF00512 His Kinase A (phospho-acceptor) domain FY132_03160 PF01810 LysE type translocator FY132_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_03165 PF03466 LysR substrate binding domain FY132_03170 PF00912 Transglycosylase FY132_03170 PF00905 Penicillin binding protein transpeptidase domain FY132_03175 PF03692 Putative zinc- or iron-chelating domain FY132_03180 PF00905 Penicillin binding protein transpeptidase domain FY132_03190 PF00403 Heavy-metal-associated domain FY132_03195 PF00376 MerR family regulatory protein FY132_03195 PF09278 MerR, DNA binding FY132_03220 PF07690 Major Facilitator Superfamily FY132_03225 PF08244 Glycosyl hydrolases family 32 C terminal FY132_03225 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY132_03230 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY132_03240 PF01037 Lrp/AsnC ligand binding domain FY132_03240 PF13404 AsnC-type helix-turn-helix domain FY132_03280 PF04860 Phage portal protein FY132_03370 PF00072 Response regulator receiver domain FY132_03370 PF00486 Transcriptional regulatory protein, C terminal FY132_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_03390 PF03100 CcmE FY132_03395 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY132_03395 PF01578 Cytochrome C assembly protein FY132_03400 PF03918 Cytochrome C biogenesis protein FY132_03405 PF13180 PDZ domain FY132_03410 PF00072 Response regulator receiver domain FY132_03410 PF00486 Transcriptional regulatory protein, C terminal FY132_03415 PF00672 HAMP domain FY132_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_03415 PF00512 His Kinase A (phospho-acceptor) domain FY132_03420 PF04134 Protein of unknown function, DUF393 FY132_03425 PF06629 MltA-interacting protein MipA FY132_03430 PF08335 GlnD PII-uridylyltransferase FY132_03430 PF03710 Glutamate-ammonia ligase adenylyltransferase FY132_03435 PF00512 His Kinase A (phospho-acceptor) domain FY132_03435 PF00989 PAS fold FY132_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_03445 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY132_03445 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY132_03445 PF01433 Peptidase family M1 domain FY132_03450 PF00892 EamA-like transporter family FY132_03465 PF00012 Hsp70 protein FY132_03470 PF00990 Diguanylate cyclase, GGDEF domain FY132_03500 PF08240 Alcohol dehydrogenase GroES-like domain FY132_03500 PF00107 Zinc-binding dehydrogenase FY132_03505 PF01638 HxlR-like helix-turn-helix FY132_03510 PF02673 Bacitracin resistance protein BacA FY132_03515 PF01769 Divalent cation transporter FY132_03515 PF00571 CBS domain FY132_03515 PF03448 MgtE intracellular N domain FY132_03520 PF07690 Major Facilitator Superfamily FY132_03525 PF00781 Diacylglycerol kinase catalytic domain FY132_03530 PF00202 Aminotransferase class-III FY132_03545 PF01048 Phosphorylase superfamily FY132_03545 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY132_03570 PF00155 Aminotransferase class I and II FY132_03580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_03580 PF14759 Reductase C-terminal FY132_03585 PF03328 HpcH/HpaI aldolase/citrate lyase family FY132_03600 PF02530 Porin subfamily FY132_03605 PF02530 Porin subfamily FY132_03610 PF01464 Transglycosylase SLT domain FY132_03610 PF14718 Soluble lytic murein transglycosylase L domain FY132_03615 PF00701 Dihydrodipicolinate synthetase family FY132_03620 PF01668 SmpB protein FY132_03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_03635 PF01192 RNA polymerase Rpb6 FY132_03640 PF13291 ACT domain FY132_03640 PF04607 Region found in RelA / SpoT proteins FY132_03640 PF02824 TGS domain FY132_03655 PF01648 4'-phosphopantetheinyl transferase superfamily FY132_03660 PF10502 Signal peptidase, peptidase S26 FY132_03665 PF00035 Double-stranded RNA binding motif FY132_03665 PF14622 Ribonuclease-III-like FY132_03670 PF07650 KH domain FY132_03670 PF01926 50S ribosome-binding GTPase FY132_03680 PF00072 Response regulator receiver domain FY132_03685 PF02565 Recombination protein O C terminal FY132_03685 PF11967 Recombination protein O N terminal FY132_03690 PF07690 Major Facilitator Superfamily FY132_03695 PF08241 Methyltransferase domain FY132_03705 PF01966 HD domain FY132_03715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_03725 PF00005 ABC transporter FY132_03730 PF00528 Binding-protein-dependent transport system inner membrane component FY132_03735 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY132_03740 PF05552 Conserved TM helix FY132_03740 PF00924 Mechanosensitive ion channel FY132_03750 PF01966 HD domain FY132_03755 PF01571 Aminomethyltransferase folate-binding domain FY132_03775 PF00293 NUDIX domain FY132_03780 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY132_03790 PF00072 Response regulator receiver domain FY132_03790 PF00990 Diguanylate cyclase, GGDEF domain FY132_03795 PF01066 CDP-alcohol phosphatidyltransferase FY132_03800 PF02666 Phosphatidylserine decarboxylase FY132_03805 PF00005 ABC transporter FY132_03805 PF00664 ABC transporter transmembrane region FY132_03815 PF03641 Possible lysine decarboxylase FY132_03820 PF03717 Penicillin-binding Protein dimerisation domain FY132_03820 PF00905 Penicillin binding protein transpeptidase domain FY132_03825 PF00892 EamA-like transporter family FY132_03830 PF00561 alpha/beta hydrolase fold FY132_03845 PF04480 Protein of unknown function (DUF559) FY132_03850 PF01406 tRNA synthetases class I (C) catalytic domain FY132_03850 PF09190 DALR domain FY132_03855 PF00106 short chain dehydrogenase FY132_03860 PF00156 Phosphoribosyl transferase domain FY132_03860 PF13537 Glutamine amidotransferase domain FY132_03865 PF02674 Colicin V production protein FY132_03870 PF18073 Rubredoxin metal binding domain FY132_03870 PF06745 KaiC FY132_03880 PF01168 Alanine racemase, N-terminal domain FY132_03880 PF00842 Alanine racemase, C-terminal domain FY132_03885 PF12852 Cupin FY132_03885 PF12833 Helix-turn-helix domain FY132_03890 PF03591 AzlC protein FY132_03900 PF03796 DnaB-like helicase C terminal domain FY132_03900 PF00772 DnaB-like helicase N terminal domain FY132_03915 PF13533 Biotin-lipoyl like FY132_03920 PF01281 Ribosomal protein L9, N-terminal domain FY132_03920 PF03948 Ribosomal protein L9, C-terminal domain FY132_03930 PF01084 Ribosomal protein S18 FY132_03935 PF01250 Ribosomal protein S6 FY132_03945 PF00248 Aldo/keto reductase family FY132_03950 PF00698 Acyl transferase domain FY132_03960 PF00550 Phosphopantetheine attachment site FY132_03965 PF00109 Beta-ketoacyl synthase, N-terminal domain FY132_03965 PF02801 Beta-ketoacyl synthase, C-terminal domain FY132_03975 PF02618 YceG-like family FY132_03980 PF08340 Domain of unknown function (DUF1732) FY132_03980 PF03755 YicC-like family, N-terminal region FY132_03985 PF00625 Guanylate kinase FY132_04000 PF00398 Ribosomal RNA adenine dimethylase FY132_04005 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY132_04015 PF03968 OstA-like protein FY132_04015 PF04453 LPS transport system D FY132_04030 PF02789 Cytosol aminopeptidase family, N-terminal domain FY132_04030 PF00883 Cytosol aminopeptidase family, catalytic domain FY132_04040 PF03707 Bacterial signalling protein N terminal repeat FY132_04040 PF00990 Diguanylate cyclase, GGDEF domain FY132_04040 PF00563 EAL domain FY132_04045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_04050 PF00563 EAL domain FY132_04050 PF01590 GAF domain FY132_04050 PF00990 Diguanylate cyclase, GGDEF domain FY132_04050 PF00360 Phytochrome region FY132_04055 PF00563 EAL domain FY132_04055 PF00990 Diguanylate cyclase, GGDEF domain FY132_04055 PF03707 Bacterial signalling protein N terminal repeat FY132_04060 PF00512 His Kinase A (phospho-acceptor) domain FY132_04060 PF00989 PAS fold FY132_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_04065 PF00196 Bacterial regulatory proteins, luxR family FY132_04065 PF00072 Response regulator receiver domain FY132_04075 PF00005 ABC transporter FY132_04075 PF12848 ABC transporter FY132_04080 PF00990 Diguanylate cyclase, GGDEF domain FY132_04080 PF17158 Membrane-associated sensor, integral membrane domain FY132_04085 PF13417 Glutathione S-transferase, N-terminal domain FY132_04090 PF00334 Nucleoside diphosphate kinase FY132_04110 PF02391 MoaE protein FY132_04120 PF01066 CDP-alcohol phosphatidyltransferase FY132_04125 PF01541 GIY-YIG catalytic domain FY132_04125 PF02151 UvrB/uvrC motif FY132_04125 PF08459 UvrC Helix-hairpin-helix N-terminal FY132_04135 PF13505 Outer membrane protein beta-barrel domain FY132_04145 PF00445 Ribonuclease T2 family FY132_04155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY132_04160 PF01568 Molydopterin dinucleotide binding domain FY132_04160 PF00384 Molybdopterin oxidoreductase FY132_04160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY132_04165 PF00293 NUDIX domain FY132_04175 PF00551 Formyl transferase FY132_04180 PF02769 AIR synthase related protein, C-terminal domain FY132_04180 PF00586 AIR synthase related protein, N-terminal domain FY132_04185 PF01209 ubiE/COQ5 methyltransferase family FY132_04190 PF01594 AI-2E family transporter FY132_04200 PF13090 Polyphosphate kinase C-terminal domain 2 FY132_04200 PF17941 Polyphosphate kinase C-terminal domain 1 FY132_04200 PF13089 Polyphosphate kinase N-terminal domain FY132_04200 PF02503 Polyphosphate kinase middle domain FY132_04205 PF02541 Ppx/GppA phosphatase family FY132_04210 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_04230 PF00211 Adenylate and Guanylate cyclase catalytic domain FY132_04240 PF01612 3'-5' exonuclease FY132_04240 PF00570 HRDC domain FY132_04245 PF07690 Major Facilitator Superfamily FY132_04250 PF02938 GAD domain FY132_04250 PF00152 tRNA synthetases class II (D, K and N) FY132_04250 PF01336 OB-fold nucleic acid binding domain FY132_04260 PF00672 HAMP domain FY132_04260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_04265 PF01740 STAS domain FY132_04265 PF00916 Sulfate permease family FY132_04275 PF03989 DNA gyrase C-terminal domain, beta-propeller FY132_04275 PF00521 DNA gyrase/topoisomerase IV, subunit A FY132_04280 PF04377 Arginine-tRNA-protein transferase, C terminus FY132_04280 PF04376 Arginine-tRNA-protein transferase, N terminus FY132_04290 PF00490 Delta-aminolevulinic acid dehydratase FY132_04310 PF00464 Serine hydroxymethyltransferase FY132_04315 PF03477 ATP cone domain FY132_04320 PF01872 RibD C-terminal domain FY132_04320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY132_04325 PF00677 Lumazine binding domain FY132_04330 PF01810 LysE type translocator FY132_04335 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY132_04340 PF01029 NusB family FY132_04345 PF07690 Major Facilitator Superfamily FY132_04350 PF03030 Inorganic H+ pyrophosphatase FY132_04370 PF02504 Fatty acid synthesis protein FY132_04375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY132_04375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY132_04380 PF00216 Bacterial DNA-binding protein FY132_04385 PF13411 MerR HTH family regulatory protein FY132_04400 PF00403 Heavy-metal-associated domain FY132_04405 PF00111 2Fe-2S iron-sulfur cluster binding domain FY132_04405 PF00175 Oxidoreductase NAD-binding domain FY132_04405 PF00970 Oxidoreductase FAD-binding domain FY132_04410 PF00376 MerR family regulatory protein FY132_04410 PF09278 MerR, DNA binding FY132_04415 PF00528 Binding-protein-dependent transport system inner membrane component FY132_04420 PF00528 Binding-protein-dependent transport system inner membrane component FY132_04420 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_04425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_04425 PF00005 ABC transporter FY132_04430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_04430 PF00005 ABC transporter FY132_04435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_04445 PF02386 Cation transport protein FY132_04450 PF00291 Pyridoxal-phosphate dependent enzyme FY132_04450 PF00585 C-terminal regulatory domain of Threonine dehydratase FY132_04460 PF00990 Diguanylate cyclase, GGDEF domain FY132_04465 PF02525 Flavodoxin-like fold FY132_04470 PF03466 LysR substrate binding domain FY132_04470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_04475 PF00149 Calcineurin-like phosphoesterase FY132_04475 PF02872 5'-nucleotidase, C-terminal domain FY132_04495 PF00581 Rhodanese-like domain FY132_04500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY132_04500 PF01411 tRNA synthetases class II (A) FY132_04500 PF02272 DHHA1 domain FY132_04505 PF00571 CBS domain FY132_04505 PF00291 Pyridoxal-phosphate dependent enzyme FY132_04510 PF00875 DNA photolyase FY132_04510 PF03441 FAD binding domain of DNA photolyase FY132_04520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY132_04520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY132_04550 PF06055 Exopolysaccharide synthesis, ExoD FY132_04555 PF09335 SNARE associated Golgi protein FY132_04600 PF02397 Bacterial sugar transferase FY132_04605 PF00534 Glycosyl transferases group 1 FY132_04630 PF02628 Cytochrome oxidase assembly protein FY132_04635 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY132_04640 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY132_04645 PF00491 Arginase family FY132_04650 PF00380 Ribosomal protein S9/S16 FY132_04655 PF00572 Ribosomal protein L13 FY132_04665 PF13380 CoA binding domain FY132_04670 PF01053 Cys/Met metabolism PLP-dependent enzyme FY132_04695 PF00067 Cytochrome P450 FY132_04700 PF00990 Diguanylate cyclase, GGDEF domain FY132_04705 PF00574 Clp protease FY132_04710 PF10431 C-terminal, D2-small domain, of ClpB protein FY132_04710 PF07724 AAA domain (Cdc48 subfamily) FY132_04710 PF06689 ClpX C4-type zinc finger FY132_04715 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY132_04715 PF05362 Lon protease (S16) C-terminal proteolytic domain FY132_04715 PF00004 ATPase family associated with various cellular activities (AAA) FY132_04720 PF00216 Bacterial DNA-binding protein FY132_04725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY132_04750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY132_04755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY132_04760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY132_04770 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY132_04785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY132_04785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY132_04785 PF10531 SLBB domain FY132_04790 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY132_04790 PF00384 Molybdopterin oxidoreductase FY132_04790 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY132_04795 PF00146 NADH dehydrogenase FY132_04800 PF12838 4Fe-4S dicluster domain FY132_04805 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY132_04810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY132_04815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY132_04815 PF00361 Proton-conducting membrane transporter FY132_04820 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY132_04820 PF00361 Proton-conducting membrane transporter FY132_04825 PF00361 Proton-conducting membrane transporter FY132_04830 PF02237 Biotin protein ligase C terminal domain FY132_04830 PF03099 Biotin/lipoate A/B protein ligase family FY132_04830 PF08279 HTH domain FY132_04835 PF12706 Beta-lactamase superfamily domain FY132_04835 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY132_04835 PF17770 Ribonuclease J C-terminal domain FY132_04845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY132_04845 PF03129 Anticodon binding domain FY132_04850 PF12704 MacB-like periplasmic core domain FY132_04850 PF02687 FtsX-like permease family FY132_04855 PF00005 ABC transporter FY132_04860 PF14579 Helix-hairpin-helix motif FY132_04860 PF02811 PHP domain FY132_04860 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY132_04860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY132_04870 PF11799 impB/mucB/samB family C-terminal domain FY132_04870 PF00817 impB/mucB/samB family FY132_04890 PF00072 Response regulator receiver domain FY132_04895 PF00072 Response regulator receiver domain FY132_04895 PF00990 Diguanylate cyclase, GGDEF domain FY132_04900 PF00471 Ribosomal protein L33 FY132_04905 PF07690 Major Facilitator Superfamily FY132_04920 PF00575 S1 RNA binding domain FY132_04920 PF17876 Cold shock domain FY132_04920 PF00773 RNB domain FY132_04920 PF08461 Ribonuclease R winged-helix domain FY132_04920 PF08206 Ribonuclease B OB domain FY132_04925 PF01751 Toprim domain FY132_04925 PF13368 Topoisomerase C-terminal repeat FY132_04925 PF01396 Topoisomerase DNA binding C4 zinc finger FY132_04925 PF01131 DNA topoisomerase FY132_04935 PF17782 DprA winged helix domain FY132_04935 PF02481 DNA recombination-mediator protein A FY132_04940 PF02660 Glycerol-3-phosphate acyltransferase FY132_04945 PF01979 Amidohydrolase family FY132_04950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY132_04950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY132_04965 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_04965 PF18158 Adaptive response protein AidB N-terminal domain FY132_04965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_04970 PF00583 Acetyltransferase (GNAT) family FY132_04990 PF03652 Holliday junction resolvase FY132_04995 PF03831 PhnA domain FY132_04995 PF08274 PhnA Zinc-Ribbon FY132_05005 PF02686 Glu-tRNAGln amidotransferase C subunit FY132_05010 PF01425 Amidase FY132_05015 PF00583 Acetyltransferase (GNAT) family FY132_05015 PF13673 Acetyltransferase (GNAT) domain FY132_05020 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY132_05035 PF02934 GatB/GatE catalytic domain FY132_05035 PF02637 GatB domain FY132_05065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY132_05070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_05070 PF02785 Biotin carboxylase C-terminal domain FY132_05070 PF00289 Biotin carboxylase, N-terminal domain FY132_05075 PF00364 Biotin-requiring enzyme FY132_05080 PF01220 Dehydroquinase class II FY132_05090 PF00155 Aminotransferase class I and II FY132_05115 PF10150 Ribonuclease E/G family FY132_05115 PF00575 S1 RNA binding domain FY132_05115 PF12111 Polyribonucleotide phosphorylase C terminal FY132_05120 PF01520 N-acetylmuramoyl-L-alanine amidase FY132_05125 PF00912 Transglycosylase FY132_05125 PF17092 Penicillin-binding protein OB-like domain FY132_05125 PF00905 Penicillin binding protein transpeptidase domain FY132_05145 PF01513 ATP-NAD kinase FY132_05150 PF02567 Phenazine biosynthesis-like protein FY132_05155 PF00009 Elongation factor Tu GTP binding domain FY132_05155 PF03764 Elongation factor G, domain IV FY132_05155 PF00679 Elongation factor G C-terminus FY132_05170 PF00111 2Fe-2S iron-sulfur cluster binding domain FY132_05180 PF00809 Pterin binding enzyme FY132_05185 PF02152 Dihydroneopterin aldolase FY132_05190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY132_05200 PF05128 Domain of unknown function (DUF697) FY132_05205 PF04317 YcjX-like family, DUF463 FY132_05215 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY132_05230 PF00072 Response regulator receiver domain FY132_05230 PF00512 His Kinase A (phospho-acceptor) domain FY132_05230 PF08448 PAS fold FY132_05230 PF13188 PAS domain FY132_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_05235 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY132_05240 PF00004 ATPase family associated with various cellular activities (AAA) FY132_05240 PF07724 AAA domain (Cdc48 subfamily) FY132_05240 PF17871 AAA lid domain FY132_05240 PF02861 Clp amino terminal domain, pathogenicity island component FY132_05240 PF10431 C-terminal, D2-small domain, of ClpB protein FY132_05260 PF03466 LysR substrate binding domain FY132_05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_05270 PF01230 HIT domain FY132_05295 PF00318 Ribosomal protein S2 FY132_05300 PF00889 Elongation factor TS FY132_05305 PF00696 Amino acid kinase family FY132_05310 PF01765 Ribosome recycling factor FY132_05315 PF01255 Putative undecaprenyl diphosphate synthase FY132_05325 PF17820 PDZ domain FY132_05325 PF02163 Peptidase family M50 FY132_05330 PF01103 Surface antigen FY132_05330 PF07244 Surface antigen variable number repeat FY132_05335 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_05335 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY132_05340 PF07977 FabA-like domain FY132_05345 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY132_05345 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_05350 PF06230 LpxI C-terminal domain FY132_05350 PF17930 LpxI N-terminal domain FY132_05355 PF02684 Lipid-A-disaccharide synthetase FY132_05360 PF07729 FCD domain FY132_05360 PF00392 Bacterial regulatory proteins, gntR family FY132_05365 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_05370 PF00528 Binding-protein-dependent transport system inner membrane component FY132_05375 PF00528 Binding-protein-dependent transport system inner membrane component FY132_05380 PF00005 ABC transporter FY132_05385 PF00285 Citrate synthase, C-terminal domain FY132_05400 PF01726 LexA DNA binding domain FY132_05400 PF00717 Peptidase S24-like FY132_05425 PF00437 Type II/IV secretion system protein FY132_05425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FY132_05430 PF00482 Type II secretion system (T2SS), protein F FY132_05450 PF07963 Prokaryotic N-terminal methylation motif FY132_05450 PF08334 Type II secretion system (T2SS), protein G FY132_05460 PF00263 Bacterial type II and III secretion system protein FY132_05460 PF03958 Bacterial type II/III secretion system short domain FY132_05485 PF00793 DAHP synthetase I family FY132_05490 PF00113 Enolase, C-terminal TIM barrel domain FY132_05490 PF03952 Enolase, N-terminal domain FY132_05500 PF00676 Dehydrogenase E1 component FY132_05505 PF02780 Transketolase, C-terminal domain FY132_05505 PF02779 Transketolase, pyrimidine binding domain FY132_05505 PF00364 Biotin-requiring enzyme FY132_05510 PF00364 Biotin-requiring enzyme FY132_05510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY132_05510 PF02817 e3 binding domain FY132_05520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY132_05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_05530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY132_05530 PF04055 Radical SAM superfamily FY132_05535 PF00892 EamA-like transporter family FY132_05550 PF03364 Polyketide cyclase / dehydrase and lipid transport FY132_05555 PF02464 Competence-damaged protein FY132_05560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY132_05560 PF02542 YgbB family FY132_05565 PF01207 Dihydrouridine synthase (Dus) FY132_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_05570 PF00512 His Kinase A (phospho-acceptor) domain FY132_05570 PF00989 PAS fold FY132_05575 PF00158 Sigma-54 interaction domain FY132_05575 PF00072 Response regulator receiver domain FY132_05575 PF02954 Bacterial regulatory protein, Fis family FY132_05580 PF00672 HAMP domain FY132_05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_05580 PF00512 His Kinase A (phospho-acceptor) domain FY132_05580 PF00989 PAS fold FY132_05585 PF02954 Bacterial regulatory protein, Fis family FY132_05585 PF00072 Response regulator receiver domain FY132_05585 PF00158 Sigma-54 interaction domain FY132_05590 PF02080 TrkA-C domain FY132_05590 PF02254 TrkA-N domain FY132_05595 PF17209 Hfq protein FY132_05600 PF16360 GTP-binding GTPase Middle Region FY132_05600 PF13167 GTP-binding GTPase N-terminal FY132_05600 PF01926 50S ribosome-binding GTPase FY132_05605 PF03819 MazG nucleotide pyrophosphohydrolase domain FY132_05615 PF10414 Sirohaem synthase dimerisation region FY132_05615 PF14824 Sirohaem biosynthesis protein central FY132_05615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_05635 PF00970 Oxidoreductase FAD-binding domain FY132_05635 PF00175 Oxidoreductase NAD-binding domain FY132_05655 PF02347 Glycine cleavage system P-protein FY132_05660 PF01597 Glycine cleavage H-protein FY132_05665 PF01571 Aminomethyltransferase folate-binding domain FY132_05665 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY132_05690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY132_05695 PF00849 RNA pseudouridylate synthase FY132_05695 PF01479 S4 domain FY132_05700 PF13419 Haloacid dehalogenase-like hydrolase FY132_05715 PF01042 Endoribonuclease L-PSP FY132_05720 PF00756 Putative esterase FY132_05730 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY132_05745 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY132_05745 PF00578 AhpC/TSA family FY132_05750 PF00043 Glutathione S-transferase, C-terminal domain FY132_05750 PF02798 Glutathione S-transferase, N-terminal domain FY132_05765 PF03358 NADPH-dependent FMN reductase FY132_05770 PF03960 ArsC family FY132_05775 PF01758 Sodium Bile acid symporter family FY132_05780 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY132_05790 PF00654 Voltage gated chloride channel FY132_05795 PF12706 Beta-lactamase superfamily domain FY132_05795 PF03099 Biotin/lipoate A/B protein ligase family FY132_05800 PF01026 TatD related DNase FY132_05805 PF08264 Anticodon-binding domain of tRNA FY132_05805 PF09334 tRNA synthetases class I (M) FY132_05810 PF09115 DNA polymerase III, delta subunit, C terminal FY132_05815 PF02223 Thymidylate kinase FY132_05820 PF07943 Penicillin-binding protein 5, C-terminal domain FY132_05820 PF00768 D-alanyl-D-alanine carboxypeptidase FY132_05825 PF03330 Lytic transglycolase FY132_05825 PF05036 Sporulation related domain FY132_05860 PF03354 Phage Terminase FY132_05935 PF00521 DNA gyrase/topoisomerase IV, subunit A FY132_05935 PF03989 DNA gyrase C-terminal domain, beta-propeller FY132_05940 PF01914 MarC family integral membrane protein FY132_05945 PF01743 Poly A polymerase head domain FY132_05945 PF00571 CBS domain FY132_05955 PF00436 Single-strand binding protein family FY132_05960 PF17755 UvrA DNA-binding domain FY132_05960 PF17760 UvrA interaction domain FY132_05970 PF01207 Dihydrouridine synthase (Dus) FY132_05975 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY132_05980 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_05990 PF00950 ABC 3 transport family FY132_05995 PF00005 ABC transporter FY132_06000 PF01297 Zinc-uptake complex component A periplasmic FY132_06005 PF00356 Bacterial regulatory proteins, lacI family FY132_06015 PF00248 Aldo/keto reductase family FY132_06025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY132_06025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY132_06030 PF03597 Cytochrome oxidase maturation protein cbb3-type FY132_06040 PF05751 FixH FY132_06045 PF13746 4Fe-4S dicluster domain FY132_06045 PF12801 4Fe-4S binding domain FY132_06045 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY132_06065 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY132_06065 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY132_06080 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY132_06085 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY132_06105 PF00376 MerR family regulatory protein FY132_06105 PF09278 MerR, DNA binding FY132_06110 PF01769 Divalent cation transporter FY132_06110 PF03448 MgtE intracellular N domain FY132_06110 PF00571 CBS domain FY132_06115 PF00384 Molybdopterin oxidoreductase FY132_06125 PF01327 Polypeptide deformylase FY132_06135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_06135 PF00512 His Kinase A (phospho-acceptor) domain FY132_06135 PF00989 PAS fold FY132_06145 PF03099 Biotin/lipoate A/B protein ligase family FY132_06150 PF08240 Alcohol dehydrogenase GroES-like domain FY132_06150 PF00107 Zinc-binding dehydrogenase FY132_06175 PF02355 Protein export membrane protein FY132_06175 PF07549 SecD/SecF GG Motif FY132_06180 PF02699 Preprotein translocase subunit FY132_06190 PF08240 Alcohol dehydrogenase GroES-like domain FY132_06190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY132_06195 PF08360 QacR-like protein, C-terminal region FY132_06195 PF00440 Bacterial regulatory proteins, tetR family FY132_06200 PF00067 Cytochrome P450 FY132_06210 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_06210 PF06426 Serine acetyltransferase, N-terminal FY132_06215 PF00561 alpha/beta hydrolase fold FY132_06225 PF01494 FAD binding domain FY132_06230 PF01053 Cys/Met metabolism PLP-dependent enzyme FY132_06235 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_06240 PF00528 Binding-protein-dependent transport system inner membrane component FY132_06245 PF00528 Binding-protein-dependent transport system inner membrane component FY132_06250 PF00005 ABC transporter FY132_06265 PF01368 DHH family FY132_06265 PF02272 DHHA1 domain FY132_06265 PF17768 RecJ OB domain FY132_06275 PF00742 Homoserine dehydrogenase FY132_06275 PF03447 Homoserine dehydrogenase, NAD binding domain FY132_06275 PF01842 ACT domain FY132_06280 PF00155 Aminotransferase class I and II FY132_06285 PF01156 Inosine-uridine preferring nucleoside hydrolase FY132_06290 PF01925 Sulfite exporter TauE/SafE FY132_06305 PF08240 Alcohol dehydrogenase GroES-like domain FY132_06305 PF00107 Zinc-binding dehydrogenase FY132_06310 PF02801 Beta-ketoacyl synthase, C-terminal domain FY132_06310 PF00109 Beta-ketoacyl synthase, N-terminal domain FY132_06320 PF07977 FabA-like domain FY132_06325 PF00550 Phosphopantetheine attachment site FY132_06330 PF04055 Radical SAM superfamily FY132_06335 PF00027 Cyclic nucleotide-binding domain FY132_06335 PF13545 Crp-like helix-turn-helix domain FY132_06345 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY132_06350 PF03749 Sugar fermentation stimulation protein RE domain FY132_06350 PF17746 SfsA N-terminal OB domain FY132_06355 PF00557 Metallopeptidase family M24 FY132_06360 PF04002 RadC-like JAB domain FY132_06375 PF01474 Class-II DAHP synthetase family FY132_06390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY132_06390 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_06400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY132_06405 PF13419 Haloacid dehalogenase-like hydrolase FY132_06415 PF00206 Lyase FY132_06415 PF10415 Fumarase C C-terminus FY132_06425 PF06418 CTP synthase N-terminus FY132_06425 PF00117 Glutamine amidotransferase class-I FY132_06430 PF03840 Preprotein translocase SecG subunit FY132_06435 PF00121 Triosephosphate isomerase FY132_06445 PF00204 DNA gyrase B FY132_06445 PF00986 DNA gyrase B subunit, carboxyl terminus FY132_06445 PF01751 Toprim domain FY132_06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_06450 PF01370 NAD dependent epimerase/dehydratase family FY132_06455 PF00574 Clp protease FY132_06465 PF01022 Bacterial regulatory protein, arsR family FY132_06470 PF13091 PLD-like domain FY132_06475 PF00072 Response regulator receiver domain FY132_06480 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY132_06480 PF01571 Aminomethyltransferase folate-binding domain FY132_06480 PF01266 FAD dependent oxidoreductase FY132_06480 PF16350 FAD dependent oxidoreductase central domain FY132_06490 PF12795 Mechanosensitive ion channel porin domain FY132_06490 PF00924 Mechanosensitive ion channel FY132_06490 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY132_06555 PF00005 ABC transporter FY132_06560 PF02405 Permease MlaE FY132_06565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_06565 PF13378 Enolase C-terminal domain-like FY132_06575 PF01515 Phosphate acetyl/butaryl transferase FY132_06575 PF03949 Malic enzyme, NAD binding domain FY132_06575 PF00390 Malic enzyme, N-terminal domain FY132_06585 PF00881 Nitroreductase family FY132_06590 PF07676 WD40-like Beta Propeller Repeat FY132_06600 PF00795 Carbon-nitrogen hydrolase FY132_06600 PF02540 NAD synthase FY132_06605 PF00884 Sulfatase FY132_06615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY132_06615 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_06630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY132_06630 PF05698 Bacterial trigger factor protein (TF) C-terminus FY132_06630 PF05697 Bacterial trigger factor protein (TF) FY132_06650 PF01134 Glucose inhibited division protein A FY132_06670 PF00107 Zinc-binding dehydrogenase FY132_06670 PF08240 Alcohol dehydrogenase GroES-like domain FY132_06680 PF00550 Phosphopantetheine attachment site FY132_06685 PF00501 AMP-binding enzyme FY132_06685 PF13193 AMP-binding enzyme C-terminal domain FY132_06695 PF04715 Anthranilate synthase component I, N terminal region FY132_06695 PF00117 Glutamine amidotransferase class-I FY132_06695 PF00425 chorismate binding enzyme FY132_06700 PF01702 Queuine tRNA-ribosyltransferase FY132_06705 PF02547 Queuosine biosynthesis protein FY132_06710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY132_06715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY132_06720 PF01467 Cytidylyltransferase-like FY132_06735 PF00591 Glycosyl transferase family, a/b domain FY132_06735 PF02885 Glycosyl transferase family, helical bundle domain FY132_06740 PF00218 Indole-3-glycerol phosphate synthase FY132_06745 PF01967 MoaC family FY132_06750 PF00994 Probable molybdopterin binding domain FY132_06750 PF03453 MoeA N-terminal region (domain I and II) FY132_06750 PF03454 MoeA C-terminal region (domain IV) FY132_06755 PF00990 Diguanylate cyclase, GGDEF domain FY132_06755 PF17158 Membrane-associated sensor, integral membrane domain FY132_06765 PF00999 Sodium/hydrogen exchanger family FY132_06765 PF02254 TrkA-N domain FY132_06775 PF04055 Radical SAM superfamily FY132_06775 PF06463 Molybdenum Cofactor Synthesis C FY132_06785 PF07690 Major Facilitator Superfamily FY132_06790 PF12804 MobA-like NTP transferase domain FY132_06795 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY132_06800 PF01551 Peptidase family M23 FY132_06810 PF01975 Survival protein SurE FY132_06815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY132_06815 PF02403 Seryl-tRNA synthetase N-terminal domain FY132_06820 PF00902 Sec-independent protein translocase protein (TatC) FY132_06825 PF02416 mttA/Hcf106 family FY132_06830 PF02416 mttA/Hcf106 family FY132_06835 PF04079 Segregation and condensation complex subunit ScpB FY132_06840 PF02616 Segregation and condensation protein ScpA FY132_06845 PF00933 Glycosyl hydrolase family 3 N terminal domain FY132_06855 PF00750 tRNA synthetases class I (R) FY132_06855 PF05746 DALR anticodon binding domain FY132_06855 PF03485 Arginyl tRNA synthetase N terminal domain FY132_06860 PF01966 HD domain FY132_06860 PF13286 Phosphohydrolase-associated domain FY132_06865 PF01521 Iron-sulphur cluster biosynthesis FY132_06875 PF08238 Sel1 repeat FY132_06885 PF10458 Valyl tRNA synthetase tRNA binding arm FY132_06885 PF00133 tRNA synthetases class I (I, L, M and V) FY132_06885 PF08264 Anticodon-binding domain of tRNA FY132_07035 PF00565 Staphylococcal nuclease homologue FY132_07110 PF06381 Protein of unknown function (DUF1073) FY132_07160 PF11638 DnaA N-terminal domain FY132_07160 PF00308 Bacterial dnaA protein FY132_07160 PF08299 Bacterial dnaA protein helix-turn-helix FY132_07180 PF00145 C-5 cytosine-specific DNA methylase FY132_07185 PF00772 DnaB-like helicase N terminal domain FY132_07185 PF14528 LAGLIDADG-like domain FY132_07185 PF03796 DnaB-like helicase C terminal domain FY132_07345 PF03358 NADPH-dependent FMN reductase FY132_07350 PF02464 Competence-damaged protein FY132_07350 PF18146 Damage-inducible protein CinA KH domain FY132_07350 PF00994 Probable molybdopterin binding domain FY132_07355 PF00582 Universal stress protein family FY132_07360 PF00156 Phosphoribosyl transferase domain FY132_07370 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY132_07370 PF02867 Ribonucleotide reductase, barrel domain FY132_07385 PF01566 Natural resistance-associated macrophage protein FY132_07395 PF00664 ABC transporter transmembrane region FY132_07395 PF00005 ABC transporter FY132_07400 PF01594 AI-2E family transporter FY132_07405 PF00583 Acetyltransferase (GNAT) family FY132_07435 PF03129 Anticodon binding domain FY132_07435 PF02824 TGS domain FY132_07435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY132_07435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY132_07445 PF01809 Putative membrane protein insertion efficiency factor FY132_07455 PF01227 GTP cyclohydrolase I FY132_07460 PF01502 Phosphoribosyl-AMP cyclohydrolase FY132_07465 PF01734 Patatin-like phospholipase FY132_07475 PF00571 CBS domain FY132_07475 PF00478 IMP dehydrogenase / GMP reductase domain FY132_07510 PF03313 Serine dehydratase alpha chain FY132_07510 PF03315 Serine dehydratase beta chain FY132_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_07550 PF03466 LysR substrate binding domain FY132_07560 PF01965 DJ-1/PfpI family FY132_07560 PF12833 Helix-turn-helix domain FY132_07565 PF01256 Carbohydrate kinase FY132_07565 PF03853 YjeF-related protein N-terminus FY132_07575 PF00543 Nitrogen regulatory protein P-II FY132_07580 PF00120 Glutamine synthetase, catalytic domain FY132_07580 PF03951 Glutamine synthetase, beta-Grasp domain FY132_07590 PF08755 Hemimethylated DNA-binding protein YccV like FY132_07600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_07610 PF00892 EamA-like transporter family FY132_07620 PF00270 DEAD/DEAH box helicase FY132_07620 PF03461 TRCF domain FY132_07620 PF17757 UvrB interaction domain FY132_07620 PF02559 CarD-like/TRCF domain FY132_07620 PF00271 Helicase conserved C-terminal domain FY132_07630 PF00271 Helicase conserved C-terminal domain FY132_07630 PF00270 DEAD/DEAH box helicase FY132_07630 PF17191 RecG wedge domain FY132_07645 PF01850 PIN domain FY132_07660 PF01380 SIS domain FY132_07670 PF12804 MobA-like NTP transferase domain FY132_07670 PF14602 Hexapeptide repeat of succinyl-transferase FY132_07670 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_07675 PF00392 Bacterial regulatory proteins, gntR family FY132_07675 PF07729 FCD domain FY132_07680 PF02608 ABC transporter substrate-binding protein PnrA-like FY132_07685 PF02653 Branched-chain amino acid transport system / permease component FY132_07690 PF02653 Branched-chain amino acid transport system / permease component FY132_07695 PF00005 ABC transporter FY132_07705 PF01494 FAD binding domain FY132_07710 PF03547 Membrane transport protein FY132_07715 PF02683 Cytochrome C biogenesis protein transmembrane region FY132_07735 PF00313 'Cold-shock' DNA-binding domain FY132_07785 PF12704 MacB-like periplasmic core domain FY132_07785 PF00005 ABC transporter FY132_07785 PF02687 FtsX-like permease family FY132_07790 PF00005 ABC transporter FY132_07790 PF12704 MacB-like periplasmic core domain FY132_07790 PF02687 FtsX-like permease family FY132_07810 PF01521 Iron-sulphur cluster biosynthesis FY132_07815 PF01883 Iron-sulfur cluster assembly protein FY132_07820 PF00266 Aminotransferase class-V FY132_07825 PF01458 Uncharacterized protein family (UPF0051) FY132_07830 PF00005 ABC transporter FY132_07835 PF01458 Uncharacterized protein family (UPF0051) FY132_07840 PF00266 Aminotransferase class-V FY132_07845 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY132_07850 PF03702 Anhydro-N-acetylmuramic acid kinase FY132_07855 PF00579 tRNA synthetases class I (W and Y) FY132_07865 PF00578 AhpC/TSA family FY132_07870 PF04305 Protein of unknown function (DUF455) FY132_07875 PF01476 LysM domain FY132_07875 PF01551 Peptidase family M23 FY132_07875 PF08525 Opacity-associated protein A N-terminal motif FY132_07880 PF00270 DEAD/DEAH box helicase FY132_07880 PF00271 Helicase conserved C-terminal domain FY132_07895 PF00834 Ribulose-phosphate 3 epimerase family FY132_07905 PF10397 Adenylosuccinate lyase C-terminus FY132_07905 PF00206 Lyase FY132_07915 PF01259 SAICAR synthetase FY132_07920 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY132_07940 PF00155 Aminotransferase class I and II FY132_07940 PF00392 Bacterial regulatory proteins, gntR family FY132_07945 PF00586 AIR synthase related protein, N-terminal domain FY132_07945 PF02769 AIR synthase related protein, C-terminal domain FY132_07945 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY132_07965 PF00462 Glutaredoxin FY132_07970 PF07690 Major Facilitator Superfamily FY132_07975 PF00459 Inositol monophosphatase family FY132_07980 PF00459 Inositol monophosphatase family FY132_07985 PF01171 PP-loop family FY132_07990 PF04960 Glutaminase FY132_07995 PF01479 S4 domain FY132_07995 PF00163 Ribosomal protein S4/S9 N-terminal domain FY132_08000 PF03741 Integral membrane protein TerC family FY132_08010 PF00892 EamA-like transporter family FY132_08015 PF01810 LysE type translocator FY132_08025 PF01177 Asp/Glu/Hydantoin racemase FY132_08030 PF00588 SpoU rRNA Methylase family FY132_08040 PF00180 Isocitrate/isopropylmalate dehydrogenase FY132_08050 PF02272 DHHA1 domain FY132_08050 PF01411 tRNA synthetases class II (A) FY132_08050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY132_08055 PF00154 recA bacterial DNA recombination protein FY132_08060 PF00294 pfkB family carbohydrate kinase FY132_08065 PF04227 Indigoidine synthase A like protein FY132_08070 PF00691 OmpA family FY132_08070 PF01389 OmpA-like transmembrane domain FY132_08075 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_08080 PF00528 Binding-protein-dependent transport system inner membrane component FY132_08085 PF00528 Binding-protein-dependent transport system inner membrane component FY132_08090 PF06233 Usg-like family FY132_08095 PF08241 Methyltransferase domain FY132_08100 PF09084 NMT1/THI5 like FY132_08105 PF13404 AsnC-type helix-turn-helix domain FY132_08105 PF01037 Lrp/AsnC ligand binding domain FY132_08110 PF03167 Uracil DNA glycosylase superfamily FY132_08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_08120 PF00989 PAS fold FY132_08120 PF00512 His Kinase A (phospho-acceptor) domain FY132_08125 PF01219 Prokaryotic diacylglycerol kinase FY132_08130 PF02277 Phosphoribosyltransferase FY132_08135 PF02654 Cobalamin-5-phosphate synthase FY132_08150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY132_08155 PF01061 ABC-2 type transporter FY132_08160 PF00005 ABC transporter FY132_08165 PF01925 Sulfite exporter TauE/SafE FY132_08175 PF08269 Cache domain FY132_08175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_08185 PF00004 ATPase family associated with various cellular activities (AAA) FY132_08185 PF16193 AAA C-terminal domain FY132_08185 PF12002 MgsA AAA+ ATPase C terminal FY132_08190 PF00595 PDZ domain FY132_08190 PF13180 PDZ domain FY132_08210 PF00920 Dehydratase family FY132_08215 PF00174 Oxidoreductase molybdopterin binding domain FY132_08220 PF01794 Ferric reductase like transmembrane component FY132_08230 PF05675 Protein of unknown function (DUF817) FY132_08235 PF01196 Ribosomal protein L17 FY132_08240 PF01000 RNA polymerase Rpb3/RpoA insert domain FY132_08240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY132_08240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY132_08245 PF00411 Ribosomal protein S11 FY132_08250 PF00416 Ribosomal protein S13/S18 FY132_08260 PF00344 SecY translocase FY132_08265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY132_08270 PF00327 Ribosomal protein L30p/L7e FY132_08275 PF00333 Ribosomal protein S5, N-terminal domain FY132_08275 PF03719 Ribosomal protein S5, C-terminal domain FY132_08280 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY132_08285 PF00347 Ribosomal protein L6 FY132_08290 PF00410 Ribosomal protein S8 FY132_08295 PF00253 Ribosomal protein S14p/S29e FY132_08300 PF00281 Ribosomal protein L5 FY132_08300 PF00673 ribosomal L5P family C-terminus FY132_08305 PF00467 KOW motif FY132_08305 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY132_08310 PF00238 Ribosomal protein L14p/L23e FY132_08315 PF00366 Ribosomal protein S17 FY132_08320 PF00831 Ribosomal L29 protein FY132_08325 PF00252 Ribosomal protein L16p/L10e FY132_08330 PF07650 KH domain FY132_08330 PF00189 Ribosomal protein S3, C-terminal domain FY132_08335 PF00237 Ribosomal protein L22p/L17e FY132_08340 PF00203 Ribosomal protein S19 FY132_08345 PF00181 Ribosomal Proteins L2, RNA binding domain FY132_08345 PF03947 Ribosomal Proteins L2, C-terminal domain FY132_08350 PF00276 Ribosomal protein L23 FY132_08355 PF00573 Ribosomal protein L4/L1 family FY132_08360 PF00297 Ribosomal protein L3 FY132_08365 PF00338 Ribosomal protein S10p/S20e FY132_08370 PF03143 Elongation factor Tu C-terminal domain FY132_08370 PF03144 Elongation factor Tu domain 2 FY132_08370 PF00009 Elongation factor Tu GTP binding domain FY132_08375 PF00679 Elongation factor G C-terminus FY132_08375 PF14492 Elongation Factor G, domain II FY132_08375 PF03764 Elongation factor G, domain IV FY132_08375 PF00009 Elongation factor Tu GTP binding domain FY132_08375 PF03144 Elongation factor Tu domain 2 FY132_08380 PF00177 Ribosomal protein S7p/S5e FY132_08385 PF00164 Ribosomal protein S12/S23 FY132_08405 PF04998 RNA polymerase Rpb1, domain 5 FY132_08405 PF04983 RNA polymerase Rpb1, domain 3 FY132_08405 PF05000 RNA polymerase Rpb1, domain 4 FY132_08405 PF04997 RNA polymerase Rpb1, domain 1 FY132_08405 PF00623 RNA polymerase Rpb1, domain 2 FY132_08410 PF04560 RNA polymerase Rpb2, domain 7 FY132_08410 PF00562 RNA polymerase Rpb2, domain 6 FY132_08410 PF04565 RNA polymerase Rpb2, domain 3 FY132_08410 PF10385 RNA polymerase beta subunit external 1 domain FY132_08410 PF04563 RNA polymerase beta subunit FY132_08410 PF04561 RNA polymerase Rpb2, domain 2 FY132_08415 PF00542 Ribosomal protein L7/L12 C-terminal domain FY132_08415 PF16320 Ribosomal protein L7/L12 dimerisation domain FY132_08420 PF00466 Ribosomal protein L10 FY132_08425 PF00687 Ribosomal protein L1p/L10e family FY132_08430 PF00298 Ribosomal protein L11, RNA binding domain FY132_08430 PF03946 Ribosomal protein L11, N-terminal domain FY132_08435 PF00467 KOW motif FY132_08435 PF02357 Transcription termination factor nusG FY132_08440 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY132_08450 PF08485 Polysaccharide biosynthesis protein C-terminal FY132_08450 PF02719 Polysaccharide biosynthesis protein FY132_08455 PF00009 Elongation factor Tu GTP binding domain FY132_08455 PF03144 Elongation factor Tu domain 2 FY132_08455 PF03143 Elongation factor Tu C-terminal domain FY132_08460 PF03741 Integral membrane protein TerC family FY132_08465 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY132_08485 PF00664 ABC transporter transmembrane region FY132_08485 PF00005 ABC transporter FY132_08525 PF04542 Sigma-70 region 2 FY132_08525 PF04545 Sigma-70, region 4 FY132_08535 PF02954 Bacterial regulatory protein, Fis family FY132_08535 PF00072 Response regulator receiver domain FY132_08535 PF00158 Sigma-54 interaction domain FY132_08540 PF00072 Response regulator receiver domain FY132_08540 PF08769 Sporulation initiation factor Spo0A C terminal FY132_08545 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_08545 PF00072 Response regulator receiver domain FY132_08545 PF01627 Hpt domain FY132_08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_08545 PF00512 His Kinase A (phospho-acceptor) domain FY132_08550 PF00072 Response regulator receiver domain FY132_08555 PF07536 HWE histidine kinase FY132_08555 PF13426 PAS domain FY132_08555 PF08447 PAS fold FY132_08560 PF00072 Response regulator receiver domain FY132_08565 PF01590 GAF domain FY132_08565 PF00360 Phytochrome region FY132_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_08565 PF00512 His Kinase A (phospho-acceptor) domain FY132_08565 PF08446 PAS fold FY132_08580 PF00588 SpoU rRNA Methylase family FY132_08580 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY132_08585 PF03061 Thioesterase superfamily FY132_08605 PF13460 NAD(P)H-binding FY132_08610 PF01638 HxlR-like helix-turn-helix FY132_08625 PF12344 Ultra-violet resistance protein B FY132_08625 PF00271 Helicase conserved C-terminal domain FY132_08625 PF17757 UvrB interaction domain FY132_08625 PF04851 Type III restriction enzyme, res subunit FY132_08625 PF02151 UvrB/uvrC motif FY132_08635 PF00756 Putative esterase FY132_08635 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY132_08655 PF00226 DnaJ domain FY132_08655 PF00684 DnaJ central domain FY132_08655 PF01556 DnaJ C terminal domain FY132_08675 PF17151 Periplasmic sensor domain FY132_08675 PF00990 Diguanylate cyclase, GGDEF domain FY132_08685 PF00005 ABC transporter FY132_08685 PF08402 TOBE domain FY132_08695 PF01547 Bacterial extracellular solute-binding protein FY132_08700 PF00155 Aminotransferase class I and II FY132_08705 PF05025 RbsD / FucU transport protein family FY132_08715 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY132_08715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY132_08720 PF00440 Bacterial regulatory proteins, tetR family FY132_08725 PF06719 AraC-type transcriptional regulator N-terminus FY132_08725 PF12833 Helix-turn-helix domain FY132_08730 PF08240 Alcohol dehydrogenase GroES-like domain FY132_08730 PF00107 Zinc-binding dehydrogenase FY132_08735 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_08740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY132_08745 PF03472 Autoinducer binding domain FY132_08745 PF00196 Bacterial regulatory proteins, luxR family FY132_08750 PF14490 Helix-hairpin-helix containing domain FY132_08750 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY132_08750 PF13538 UvrD-like helicase C-terminal domain FY132_08770 PF08281 Sigma-70, region 4 FY132_08770 PF04542 Sigma-70 region 2 FY132_08785 PF00248 Aldo/keto reductase family FY132_08800 PF10369 Small subunit of acetolactate synthase FY132_08805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY132_08805 PF00205 Thiamine pyrophosphate enzyme, central domain FY132_08805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY132_08825 PF13302 Acetyltransferase (GNAT) domain FY132_08835 PF13180 PDZ domain FY132_08840 PF01145 SPFH domain / Band 7 family FY132_08845 PF01145 SPFH domain / Band 7 family FY132_08850 PF00186 Dihydrofolate reductase FY132_08855 PF00303 Thymidylate synthase FY132_08890 PF01565 FAD binding domain FY132_08890 PF02913 FAD linked oxidases, C-terminal domain FY132_08895 PF00873 AcrB/AcrD/AcrF family FY132_08900 PF13533 Biotin-lipoyl like FY132_08910 PF00580 UvrD/REP helicase N-terminal domain FY132_08910 PF13361 UvrD-like helicase C-terminal domain FY132_08935 PF00857 Isochorismatase family FY132_08955 PF01321 Creatinase/Prolidase N-terminal domain FY132_08955 PF00557 Metallopeptidase family M24 FY132_08965 PF02630 SCO1/SenC FY132_08975 PF01584 CheW-like domain FY132_08985 PF00929 Exonuclease FY132_08990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_08990 PF03466 LysR substrate binding domain FY132_09000 PF00583 Acetyltransferase (GNAT) family FY132_09005 PF01636 Phosphotransferase enzyme family FY132_09010 PF03120 NAD-dependent DNA ligase OB-fold domain FY132_09010 PF12826 Helix-hairpin-helix motif FY132_09010 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY132_09010 PF01653 NAD-dependent DNA ligase adenylation domain FY132_09010 PF00533 BRCA1 C Terminus (BRCT) domain FY132_09015 PF02463 RecF/RecN/SMC N terminal domain FY132_09020 PF13525 Outer membrane lipoprotein FY132_09025 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY132_09030 PF12327 FtsZ family, C-terminal domain FY132_09030 PF00091 Tubulin/FtsZ family, GTPase domain FY132_09035 PF02491 SHS2 domain inserted in FTSA FY132_09040 PF08478 POTRA domain, FtsQ-type FY132_09040 PF03799 Cell division protein FtsQ FY132_09045 PF07478 D-ala D-ala ligase C-terminus FY132_09045 PF01820 D-ala D-ala ligase N-terminus FY132_09050 PF07690 Major Facilitator Superfamily FY132_09050 PF00083 Sugar (and other) transporter FY132_09055 PF00563 EAL domain FY132_09055 PF00990 Diguanylate cyclase, GGDEF domain FY132_09060 PF01565 FAD binding domain FY132_09060 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY132_09065 PF08245 Mur ligase middle domain FY132_09065 PF01225 Mur ligase family, catalytic domain FY132_09065 PF02875 Mur ligase family, glutamate ligase domain FY132_09070 PF04101 Glycosyltransferase family 28 C-terminal domain FY132_09070 PF03033 Glycosyltransferase family 28 N-terminal domain FY132_09075 PF01098 Cell cycle protein FY132_09080 PF02875 Mur ligase family, glutamate ligase domain FY132_09080 PF08245 Mur ligase middle domain FY132_09085 PF00953 Glycosyl transferase family 4 FY132_09085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY132_09090 PF01225 Mur ligase family, catalytic domain FY132_09090 PF02875 Mur ligase family, glutamate ligase domain FY132_09090 PF08245 Mur ligase middle domain FY132_09095 PF08245 Mur ligase middle domain FY132_09095 PF02875 Mur ligase family, glutamate ligase domain FY132_09095 PF01225 Mur ligase family, catalytic domain FY132_09100 PF00905 Penicillin binding protein transpeptidase domain FY132_09100 PF03717 Penicillin-binding Protein dimerisation domain FY132_09110 PF01795 MraW methylase family FY132_09115 PF02381 MraZ protein, putative antitoxin-like FY132_09140 PF01510 N-acetylmuramoyl-L-alanine amidase FY132_09145 PF00226 DnaJ domain FY132_09145 PF05099 Tellurite resistance protein TerB FY132_09150 PF00365 Phosphofructokinase FY132_09170 PF13649 Methyltransferase domain FY132_09175 PF01183 Glycosyl hydrolases family 25 FY132_09185 PF02219 Methylenetetrahydrofolate reductase FY132_09190 PF01209 ubiE/COQ5 methyltransferase family FY132_09195 PF00005 ABC transporter FY132_09195 PF12848 ABC transporter FY132_09200 PF12146 Serine aminopeptidase, S33 FY132_09205 PF02515 CoA-transferase family III FY132_09210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY132_09210 PF00205 Thiamine pyrophosphate enzyme, central domain FY132_09210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY132_09220 PF01042 Endoribonuclease L-PSP FY132_09235 PF01476 LysM domain FY132_09235 PF03734 L,D-transpeptidase catalytic domain FY132_09240 PF07690 Major Facilitator Superfamily FY132_09260 PF10609 NUBPL iron-transfer P-loop NTPase FY132_09265 PF00465 Iron-containing alcohol dehydrogenase FY132_09270 PF00171 Aldehyde dehydrogenase family FY132_09275 PF00120 Glutamine synthetase, catalytic domain FY132_09275 PF03951 Glutamine synthetase, beta-Grasp domain FY132_09280 PF13520 Amino acid permease FY132_09290 PF01418 Helix-turn-helix domain, rpiR family FY132_09290 PF01380 SIS domain FY132_09295 PF13416 Bacterial extracellular solute-binding protein FY132_09310 PF00005 ABC transporter FY132_09310 PF08402 TOBE domain FY132_09315 PF00107 Zinc-binding dehydrogenase FY132_09315 PF08240 Alcohol dehydrogenase GroES-like domain FY132_09330 PF07690 Major Facilitator Superfamily FY132_09335 PF02607 B12 binding domain FY132_09335 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY132_09335 PF00809 Pterin binding enzyme FY132_09335 PF02574 Homocysteine S-methyltransferase FY132_09335 PF02310 B12 binding domain FY132_09355 PF13505 Outer membrane protein beta-barrel domain FY132_09370 PF04402 Protein of unknown function (DUF541) FY132_09380 PF01894 Uncharacterised protein family UPF0047 FY132_09385 PF00360 Phytochrome region FY132_09385 PF08446 PAS fold FY132_09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_09385 PF01590 GAF domain FY132_09385 PF00512 His Kinase A (phospho-acceptor) domain FY132_09395 PF04546 Sigma-70, non-essential region FY132_09395 PF03979 Sigma-70 factor, region 1.1 FY132_09395 PF00140 Sigma-70 factor, region 1.2 FY132_09395 PF04542 Sigma-70 region 2 FY132_09395 PF04539 Sigma-70 region 3 FY132_09395 PF04545 Sigma-70, region 4 FY132_09400 PF10410 DnaB-helicase binding domain of primase FY132_09400 PF08278 DNA primase DnaG DnaB-binding FY132_09400 PF08275 DNA primase catalytic core, N-terminal domain FY132_09400 PF01807 CHC2 zinc finger FY132_09420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY132_09420 PF00117 Glutamine amidotransferase class-I FY132_09425 PF01554 MatE FY132_09430 PF00672 HAMP domain FY132_09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_09430 PF02743 Cache domain FY132_09440 PF04228 Putative neutral zinc metallopeptidase FY132_09455 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY132_09455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_09455 PF02142 MGS-like domain FY132_09465 PF07694 5TMR of 5TMR-LYT FY132_09465 PF00990 Diguanylate cyclase, GGDEF domain FY132_09480 PF03449 Transcription elongation factor, N-terminal FY132_09480 PF01272 Transcription elongation factor, GreA/GreB, C-term FY132_09485 PF00534 Glycosyl transferases group 1 FY132_09490 PF01037 Lrp/AsnC ligand binding domain FY132_09495 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_09500 PF03466 LysR substrate binding domain FY132_09510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY132_09525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_09525 PF03466 LysR substrate binding domain FY132_09535 PF01699 Sodium/calcium exchanger protein FY132_09540 PF00155 Aminotransferase class I and II FY132_09545 PF00563 EAL domain FY132_09545 PF05231 MASE1 FY132_09560 PF00313 'Cold-shock' DNA-binding domain FY132_09565 PF00753 Metallo-beta-lactamase superfamily FY132_09575 PF12802 MarR family FY132_09580 PF00072 Response regulator receiver domain FY132_09580 PF00486 Transcriptional regulatory protein, C terminal FY132_09585 PF00672 HAMP domain FY132_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_09585 PF00512 His Kinase A (phospho-acceptor) domain FY132_09590 PF01588 Putative tRNA binding domain FY132_09595 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY132_09595 PF03807 NADP oxidoreductase coenzyme F420-dependent FY132_09610 PF01790 Prolipoprotein diacylglyceryl transferase FY132_09620 PF02578 Multi-copper polyphenol oxidoreductase laccase FY132_09635 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY132_09635 PF14572 Phosphoribosyl synthetase-associated domain FY132_09645 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY132_09655 PF00535 Glycosyl transferase family 2 FY132_09660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_09660 PF00672 HAMP domain FY132_09665 PF00171 Aldehyde dehydrogenase family FY132_09670 PF02954 Bacterial regulatory protein, Fis family FY132_09675 PF00563 EAL domain FY132_09675 PF03707 Bacterial signalling protein N terminal repeat FY132_09675 PF13188 PAS domain FY132_09675 PF00990 Diguanylate cyclase, GGDEF domain FY132_09680 PF01386 Ribosomal L25p family FY132_09680 PF14693 Ribosomal protein TL5, C-terminal domain FY132_09685 PF00563 EAL domain FY132_09685 PF00990 Diguanylate cyclase, GGDEF domain FY132_09685 PF08448 PAS fold FY132_09685 PF08447 PAS fold FY132_09695 PF01195 Peptidyl-tRNA hydrolase FY132_09705 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY132_09710 PF06071 Protein of unknown function (DUF933) FY132_09710 PF01926 50S ribosome-binding GTPase FY132_09730 PF00156 Phosphoribosyl transferase domain FY132_09740 PF00033 Cytochrome b/b6/petB FY132_09740 PF02167 Cytochrome C1 family FY132_09740 PF00032 Cytochrome b(C-terminal)/b6/petD FY132_09745 PF00033 Cytochrome b/b6/petB FY132_09745 PF00032 Cytochrome b(C-terminal)/b6/petD FY132_09750 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY132_09750 PF00355 Rieske [2Fe-2S] domain FY132_09760 PF00664 ABC transporter transmembrane region FY132_09760 PF00005 ABC transporter FY132_09770 PF00005 ABC transporter FY132_09770 PF00664 ABC transporter transmembrane region FY132_09780 PF00588 SpoU rRNA Methylase family FY132_09785 PF02690 Na+/Pi-cotransporter FY132_09795 PF01218 Coproporphyrinogen III oxidase FY132_09810 PF01743 Poly A polymerase head domain FY132_09810 PF12627 Probable RNA and SrmB- binding site of polymerase A FY132_09810 PF13735 tRNA nucleotidyltransferase domain 2 putative FY132_09815 PF00293 NUDIX domain FY132_09825 PF07726 ATPase family associated with various cellular activities (AAA) FY132_09825 PF17863 AAA lid domain FY132_09845 PF00583 Acetyltransferase (GNAT) family FY132_09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_09850 PF03466 LysR substrate binding domain FY132_09860 PF07690 Major Facilitator Superfamily FY132_09870 PF13409 Glutathione S-transferase, N-terminal domain FY132_09875 PF00293 NUDIX domain FY132_09885 PF00682 HMGL-like FY132_09885 PF08502 LeuA allosteric (dimerisation) domain FY132_09890 PF03594 Benzoate membrane transport protein FY132_09905 PF04542 Sigma-70 region 2 FY132_09905 PF04545 Sigma-70, region 4 FY132_09915 PF00574 Clp protease FY132_09920 PF04955 HupE / UreJ protein FY132_09930 PF14489 QueF-like protein FY132_09935 PF16916 Dimerisation domain of Zinc Transporter FY132_09935 PF01545 Cation efflux family FY132_09945 PF13458 Periplasmic binding protein FY132_09955 PF01022 Bacterial regulatory protein, arsR family FY132_09960 PF00005 ABC transporter FY132_09960 PF00571 CBS domain FY132_09965 PF00528 Binding-protein-dependent transport system inner membrane component FY132_09970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY132_09980 PF00265 Thymidine kinase FY132_09985 PF00127 Copper binding proteins, plastocyanin/azurin family FY132_09995 PF03472 Autoinducer binding domain FY132_09995 PF00196 Bacterial regulatory proteins, luxR family FY132_10000 PF03350 Uncharacterized protein family, UPF0114 FY132_10005 PF07715 TonB-dependent Receptor Plug Domain FY132_10005 PF04886 PT repeat FY132_10005 PF00593 TonB dependent receptor FY132_10015 PF04715 Anthranilate synthase component I, N terminal region FY132_10015 PF00425 chorismate binding enzyme FY132_10015 PF00117 Glutamine amidotransferase class-I FY132_10025 PF11871 Domain of unknown function (DUF3391) FY132_10025 PF01966 HD domain FY132_10030 PF13382 Adenine deaminase C-terminal domain FY132_10030 PF01979 Amidohydrolase family FY132_10035 PF00583 Acetyltransferase (GNAT) family FY132_10040 PF00128 Alpha amylase, catalytic domain FY132_10045 PF00294 pfkB family carbohydrate kinase FY132_10065 PF01926 50S ribosome-binding GTPase FY132_10065 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY132_10085 PF05992 SbmA/BacA-like family FY132_10095 PF00557 Metallopeptidase family M24 FY132_10110 PF00111 2Fe-2S iron-sulfur cluster binding domain FY132_10110 PF01799 [2Fe-2S] binding domain FY132_10115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY132_10115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY132_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10125 PF03466 LysR substrate binding domain FY132_10140 PF01979 Amidohydrolase family FY132_10150 PF01070 FMN-dependent dehydrogenase FY132_10155 PF00893 Small Multidrug Resistance protein FY132_10160 PF00440 Bacterial regulatory proteins, tetR family FY132_10160 PF17932 Tetracyclin repressor-like, C-terminal domain FY132_10165 PF00768 D-alanyl-D-alanine carboxypeptidase FY132_10165 PF07943 Penicillin-binding protein 5, C-terminal domain FY132_10175 PF00576 HIUase/Transthyretin family FY132_10180 PF04115 Ureidoglycolate lyase FY132_10195 PF09349 OHCU decarboxylase FY132_10195 PF01014 Uricase FY132_10205 PF06299 Protein of unknown function (DUF1045) FY132_10210 PF01266 FAD dependent oxidoreductase FY132_10215 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY132_10215 PF01266 FAD dependent oxidoreductase FY132_10220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY132_10220 PF00072 Response regulator receiver domain FY132_10220 PF01627 Hpt domain FY132_10220 PF00512 His Kinase A (phospho-acceptor) domain FY132_10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_10220 PF00672 HAMP domain FY132_10225 PF00270 DEAD/DEAH box helicase FY132_10225 PF00271 Helicase conserved C-terminal domain FY132_10235 PF07681 DoxX FY132_10240 PF01476 LysM domain FY132_10240 PF03734 L,D-transpeptidase catalytic domain FY132_10250 PF14403 Circularly permuted ATP-grasp type 2 FY132_10260 PF08379 Bacterial transglutaminase-like N-terminal region FY132_10260 PF01841 Transglutaminase-like superfamily FY132_10285 PF02653 Branched-chain amino acid transport system / permease component FY132_10290 PF00005 ABC transporter FY132_10295 PF13407 Periplasmic binding protein domain FY132_10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10300 PF03466 LysR substrate binding domain FY132_10350 PF03743 Bacterial conjugation TrbI-like protein FY132_10360 PF04335 VirB8 protein FY132_10365 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY132_10380 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY132_10395 PF00437 Type II/IV secretion system protein FY132_10405 PF02534 Type IV secretory system Conjugative DNA transfer FY132_10415 PF01381 Helix-turn-helix FY132_10420 PF03466 LysR substrate binding domain FY132_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10425 PF02321 Outer membrane efflux protein FY132_10430 PF13533 Biotin-lipoyl like FY132_10445 PF02311 AraC-like ligand binding domain FY132_10445 PF12833 Helix-turn-helix domain FY132_10460 PF03466 LysR substrate binding domain FY132_10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY132_10470 PF00753 Metallo-beta-lactamase superfamily FY132_10470 PF10996 Beta-Casp domain FY132_10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10485 PF03466 LysR substrate binding domain FY132_10495 PF01464 Transglycosylase SLT domain FY132_10520 PF13614 AAA domain FY132_10540 PF06067 Domain of unknown function (DUF932) FY132_10555 PF07690 Major Facilitator Superfamily FY132_10560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10560 PF03466 LysR substrate binding domain FY132_10565 PF05284 Protein of unknown function (DUF736) FY132_10580 PF02463 RecF/RecN/SMC N terminal domain FY132_10610 PF00271 Helicase conserved C-terminal domain FY132_10625 PF16124 RecQ zinc-binding FY132_10625 PF00270 DEAD/DEAH box helicase FY132_10625 PF00271 Helicase conserved C-terminal domain FY132_10625 PF09382 RQC domain FY132_10625 PF00570 HRDC domain FY132_10630 PF13784 Fic/DOC family N-terminal FY132_10630 PF02661 Fic/DOC family FY132_10645 PF03358 NADPH-dependent FMN reductase FY132_10650 PF00561 alpha/beta hydrolase fold FY132_10670 PF13533 Biotin-lipoyl like FY132_10675 PF03466 LysR substrate binding domain FY132_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY132_10685 PF03466 LysR substrate binding domain FY132_10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10700 PF00857 Isochorismatase family FY132_10705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_10705 PF03466 LysR substrate binding domain FY132_10710 PF00004 ATPase family associated with various cellular activities (AAA) FY132_10710 PF01434 Peptidase family M41 FY132_10710 PF17862 AAA+ lid domain FY132_10720 PF00665 Integrase core domain FY132_10725 PF01695 IstB-like ATP binding protein FY132_10735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_10735 PF00672 HAMP domain FY132_10740 PF07690 Major Facilitator Superfamily FY132_10750 PF02607 B12 binding domain FY132_10750 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY132_10750 PF00809 Pterin binding enzyme FY132_10750 PF02574 Homocysteine S-methyltransferase FY132_10750 PF02310 B12 binding domain FY132_10755 PF00528 Binding-protein-dependent transport system inner membrane component FY132_10760 PF00528 Binding-protein-dependent transport system inner membrane component FY132_10765 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_10770 PF00005 ABC transporter FY132_10790 PF00331 Glycosyl hydrolase family 10 FY132_10795 PF00535 Glycosyl transferase family 2 FY132_10810 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY132_10825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY132_10825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY132_10825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY132_10825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY132_10840 PF01152 Bacterial-like globin FY132_10860 PF00440 Bacterial regulatory proteins, tetR family FY132_10860 PF08362 YcdC-like protein, C-terminal region FY132_10865 PF07687 Peptidase dimerisation domain FY132_10865 PF01546 Peptidase family M20/M25/M40 FY132_10870 PF01979 Amidohydrolase family FY132_10875 PF00293 NUDIX domain FY132_10880 PF00005 ABC transporter FY132_10885 PF00528 Binding-protein-dependent transport system inner membrane component FY132_10890 PF00528 Binding-protein-dependent transport system inner membrane component FY132_10905 PF00873 AcrB/AcrD/AcrF family FY132_10920 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY132_10925 PF01730 UreF FY132_10930 PF05194 UreE urease accessory protein, C-terminal domain FY132_10930 PF02814 UreE urease accessory protein, N-terminal domain FY132_10935 PF08534 Redoxin FY132_10945 PF00449 Urease alpha-subunit, N-terminal domain FY132_10945 PF01979 Amidohydrolase family FY132_10955 PF07007 Lysozyme inhibitor LprI FY132_10965 PF00699 Urease beta subunit FY132_10970 PF06906 Protein of unknown function (DUF1272) FY132_10975 PF00547 Urease, gamma subunit FY132_10980 PF01774 UreD urease accessory protein FY132_10990 PF00005 ABC transporter FY132_11000 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_11000 PF00005 ABC transporter FY132_11010 PF02653 Branched-chain amino acid transport system / permease component FY132_11020 PF10931 Protein of unknown function (DUF2735) FY132_11025 PF00120 Glutamine synthetase, catalytic domain FY132_11025 PF03951 Glutamine synthetase, beta-Grasp domain FY132_11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_11035 PF00512 His Kinase A (phospho-acceptor) domain FY132_11035 PF00072 Response regulator receiver domain FY132_11035 PF00989 PAS fold FY132_11035 PF01627 Hpt domain FY132_11035 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY132_11040 PF00072 Response regulator receiver domain FY132_11050 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY132_11050 PF01522 Polysaccharide deacetylase FY132_11055 PF13458 Periplasmic binding protein FY132_11065 PF00005 ABC transporter FY132_11070 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_11070 PF00005 ABC transporter FY132_11075 PF02653 Branched-chain amino acid transport system / permease component FY132_11075 PF11862 Domain of unknown function (DUF3382) FY132_11080 PF02653 Branched-chain amino acid transport system / permease component FY132_11085 PF00459 Inositol monophosphatase family FY132_11115 PF00486 Transcriptional regulatory protein, C terminal FY132_11115 PF00072 Response regulator receiver domain FY132_11135 PF10090 Histidine phosphotransferase C-terminal domain FY132_11150 PF00588 SpoU rRNA Methylase family FY132_11160 PF00849 RNA pseudouridylate synthase FY132_11170 PF04542 Sigma-70 region 2 FY132_11170 PF00140 Sigma-70 factor, region 1.2 FY132_11170 PF04545 Sigma-70, region 4 FY132_11180 PF00709 Adenylosuccinate synthetase FY132_11205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_11215 PF03167 Uracil DNA glycosylase superfamily FY132_11220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_11225 PF04304 Protein of unknown function (DUF454) FY132_11230 PF00005 ABC transporter FY132_11235 PF01032 FecCD transport family FY132_11240 PF01497 Periplasmic binding protein FY132_11250 PF06228 Haem utilisation ChuX/HutX FY132_11265 PF13443 Cro/C1-type HTH DNA-binding domain FY132_11275 PF00551 Formyl transferase FY132_11290 PF00672 HAMP domain FY132_11290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_11290 PF00512 His Kinase A (phospho-acceptor) domain FY132_11295 PF00486 Transcriptional regulatory protein, C terminal FY132_11295 PF00072 Response regulator receiver domain FY132_11305 PF03401 Tripartite tricarboxylate transporter family receptor FY132_11315 PF01970 Tripartite tricarboxylate transporter TctA family FY132_11330 PF01032 FecCD transport family FY132_11335 PF01032 FecCD transport family FY132_11340 PF00005 ABC transporter FY132_11345 PF00210 Ferritin-like domain FY132_11360 PF00672 HAMP domain FY132_11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_11365 PF00248 Aldo/keto reductase family FY132_11370 PF07690 Major Facilitator Superfamily FY132_11375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_11375 PF03466 LysR substrate binding domain FY132_11380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_11380 PF03466 LysR substrate binding domain FY132_11385 PF07859 alpha/beta hydrolase fold FY132_11390 PF13533 Biotin-lipoyl like FY132_11395 PF00873 AcrB/AcrD/AcrF family FY132_11410 PF13091 PLD-like domain FY132_11410 PF13396 Phospholipase_D-nuclease N-terminal FY132_11415 PF08543 Phosphomethylpyrimidine kinase FY132_11420 PF00484 Carbonic anhydrase FY132_11430 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY132_11430 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY132_11440 PF00083 Sugar (and other) transporter FY132_11445 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY132_11445 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY132_11445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY132_11450 PF02233 NAD(P) transhydrogenase beta subunit FY132_11455 PF01613 Flavin reductase like domain FY132_11460 PF00881 Nitroreductase family FY132_11465 PF00561 alpha/beta hydrolase fold FY132_11470 PF01042 Endoribonuclease L-PSP FY132_11475 PF00857 Isochorismatase family FY132_11480 PF00296 Luciferase-like monooxygenase FY132_11485 PF01126 Heme oxygenase FY132_11490 PF00701 Dihydrodipicolinate synthetase family FY132_11495 PF07729 FCD domain FY132_11495 PF00392 Bacterial regulatory proteins, gntR family FY132_11505 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11510 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11515 PF00005 ABC transporter FY132_11515 PF17912 MalK OB fold domain FY132_11515 PF03459 TOBE domain FY132_11520 PF00294 pfkB family carbohydrate kinase FY132_11525 PF03576 Peptidase family S58 FY132_11530 PF01063 Amino-transferase class IV FY132_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_11535 PF03466 LysR substrate binding domain FY132_11540 PF00144 Beta-lactamase FY132_11545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_11545 PF00005 ABC transporter FY132_11550 PF00005 ABC transporter FY132_11550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_11555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_11555 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11560 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_11570 PF01244 Membrane dipeptidase (Peptidase family M19) FY132_11580 PF03706 Lysylphosphatidylglycerol synthase TM region FY132_11580 PF09924 Uncharacterised conserved protein (DUF2156) FY132_11595 PF07690 Major Facilitator Superfamily FY132_11605 PF04444 Catechol dioxygenase N terminus FY132_11605 PF00775 Dioxygenase FY132_11610 PF00465 Iron-containing alcohol dehydrogenase FY132_11615 PF04909 Amidohydrolase FY132_11620 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY132_11620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_11625 PF01613 Flavin reductase like domain FY132_11645 PF00512 His Kinase A (phospho-acceptor) domain FY132_11645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_11650 PF00072 Response regulator receiver domain FY132_11650 PF00486 Transcriptional regulatory protein, C terminal FY132_11660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY132_11665 PF08402 TOBE domain FY132_11665 PF00005 ABC transporter FY132_11670 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11685 PF00486 Transcriptional regulatory protein, C terminal FY132_11685 PF00072 Response regulator receiver domain FY132_11690 PF08448 PAS fold FY132_11690 PF00512 His Kinase A (phospho-acceptor) domain FY132_11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_11690 PF13188 PAS domain FY132_11690 PF00072 Response regulator receiver domain FY132_11695 PF00202 Aminotransferase class-III FY132_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_11700 PF03466 LysR substrate binding domain FY132_11705 PF00313 'Cold-shock' DNA-binding domain FY132_11745 PF01259 SAICAR synthetase FY132_11750 PF00440 Bacterial regulatory proteins, tetR family FY132_11755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_11755 PF00529 HlyD membrane-fusion protein of T1SS FY132_11760 PF00873 AcrB/AcrD/AcrF family FY132_11765 PF02321 Outer membrane efflux protein FY132_11770 PF01132 Elongation factor P (EF-P) OB domain FY132_11770 PF08207 Elongation factor P (EF-P) KOW-like domain FY132_11770 PF09285 Elongation factor P, C-terminal FY132_11775 PF00152 tRNA synthetases class II (D, K and N) FY132_11780 PF12544 Lysine-2,3-aminomutase FY132_11780 PF04055 Radical SAM superfamily FY132_11795 PF03466 LysR substrate binding domain FY132_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_11800 PF01266 FAD dependent oxidoreductase FY132_11810 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11815 PF00005 ABC transporter FY132_11815 PF03459 TOBE domain FY132_11825 PF03576 Peptidase family S58 FY132_11830 PF05690 Thiazole biosynthesis protein ThiG FY132_11840 PF01266 FAD dependent oxidoreductase FY132_11845 PF13667 ThiC-associated domain FY132_11845 PF01964 Radical SAM ThiC family FY132_11855 PF00550 Phosphopantetheine attachment site FY132_11885 PF00664 ABC transporter transmembrane region FY132_11885 PF00005 ABC transporter FY132_11890 PF13545 Crp-like helix-turn-helix domain FY132_11890 PF00027 Cyclic nucleotide-binding domain FY132_11900 PF00211 Adenylate and Guanylate cyclase catalytic domain FY132_11900 PF00672 HAMP domain FY132_11910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY132_11910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY132_11910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY132_11915 PF13439 Glycosyltransferase Family 4 FY132_11915 PF00534 Glycosyl transferases group 1 FY132_11930 PF00005 ABC transporter FY132_11930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_11935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_11940 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11945 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_11945 PF00528 Binding-protein-dependent transport system inner membrane component FY132_11960 PF04101 Glycosyltransferase family 28 C-terminal domain FY132_11960 PF03033 Glycosyltransferase family 28 N-terminal domain FY132_11965 PF03932 CutC family FY132_11970 PF07690 Major Facilitator Superfamily FY132_11980 PF00728 Glycosyl hydrolase family 20, catalytic domain FY132_11980 PF02838 Glycosyl hydrolase family 20, domain 2 FY132_11990 PF01418 Helix-turn-helix domain, rpiR family FY132_11990 PF01380 SIS domain FY132_12000 PF00005 ABC transporter FY132_12000 PF17912 MalK OB fold domain FY132_12005 PF01547 Bacterial extracellular solute-binding protein FY132_12010 PF00528 Binding-protein-dependent transport system inner membrane component FY132_12015 PF00528 Binding-protein-dependent transport system inner membrane component FY132_12030 PF00392 Bacterial regulatory proteins, gntR family FY132_12030 PF07702 UTRA domain FY132_12035 PF01380 SIS domain FY132_12040 PF01979 Amidohydrolase family FY132_12045 PF00480 ROK family FY132_12050 PF01494 FAD binding domain FY132_12055 PF01569 PAP2 superfamily FY132_12060 PF13288 DXP reductoisomerase C-terminal domain FY132_12060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY132_12060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY132_12065 PF00155 Aminotransferase class I and II FY132_12075 PF17243 POTRA domain TamA domain 1 FY132_12075 PF01103 Surface antigen FY132_12075 PF07244 Surface antigen variable number repeat FY132_12085 PF01584 CheW-like domain FY132_12090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_12090 PF08447 PAS fold FY132_12090 PF13426 PAS domain FY132_12095 PF02634 FdhD/NarQ family FY132_12100 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY132_12105 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY132_12105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY132_12110 PF00231 ATP synthase FY132_12115 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY132_12115 PF00306 ATP synthase alpha/beta chain, C terminal domain FY132_12115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY132_12120 PF00213 ATP synthase delta (OSCP) subunit FY132_12130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY132_12130 PF18074 Primosomal protein N C-terminal domain FY132_12130 PF17764 3′ DNA-binding domain (3′BD) FY132_12130 PF00270 DEAD/DEAH box helicase FY132_12135 PF02899 Phage integrase, N-terminal SAM-like domain FY132_12135 PF00589 Phage integrase family FY132_12155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_12155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY132_12160 PF01810 LysE type translocator FY132_12170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY132_12170 PF00364 Biotin-requiring enzyme FY132_12170 PF02817 e3 binding domain FY132_12175 PF00676 Dehydrogenase E1 component FY132_12175 PF16870 2-oxoglutarate dehydrogenase C-terminal FY132_12175 PF16078 2-oxoglutarate dehydrogenase N-terminus FY132_12175 PF02779 Transketolase, pyrimidine binding domain FY132_12180 PF02629 CoA binding domain FY132_12180 PF00549 CoA-ligase FY132_12185 PF00549 CoA-ligase FY132_12185 PF08442 ATP-grasp domain FY132_12190 PF00056 lactate/malate dehydrogenase, NAD binding domain FY132_12190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY132_12195 PF03969 AFG1-like ATPase FY132_12200 PF02974 Protease inhibitor Inh FY132_12205 PF13085 2Fe-2S iron-sulfur cluster binding domain FY132_12205 PF13237 4Fe-4S dicluster domain FY132_12210 PF00890 FAD binding domain FY132_12210 PF02910 Fumarate reductase flavoprotein C-term FY132_12220 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY132_12245 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY132_12245 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY132_12250 PF00814 Glycoprotease family FY132_12255 PF03900 Porphobilinogen deaminase, C-terminal domain FY132_12255 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY132_12280 PF00117 Glutamine amidotransferase class-I FY132_12290 PF02325 YGGT family FY132_12295 PF02594 Uncharacterised ACR, YggU family COG1872 FY132_12300 PF00719 Inorganic pyrophosphatase FY132_12310 PF00679 Elongation factor G C-terminus FY132_12310 PF00009 Elongation factor Tu GTP binding domain FY132_12310 PF03144 Elongation factor Tu domain 2 FY132_12315 PF01432 Peptidase family M3 FY132_12320 PF01047 MarR family FY132_12325 PF07690 Major Facilitator Superfamily FY132_12330 PF00764 Arginosuccinate synthase FY132_12335 PF00106 short chain dehydrogenase FY132_12340 PF01810 LysE type translocator FY132_12345 PF00005 ABC transporter FY132_12350 PF02653 Branched-chain amino acid transport system / permease component FY132_12360 PF04055 Radical SAM superfamily FY132_12375 PF01329 Pterin 4 alpha carbinolamine dehydratase FY132_12380 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY132_12385 PF02834 LigT like Phosphoesterase FY132_12390 PF13472 GDSL-like Lipase/Acylhydrolase family FY132_12395 PF00005 ABC transporter FY132_12405 PF01027 Inhibitor of apoptosis-promoting Bax1 FY132_12420 PF00330 Aconitase family (aconitate hydratase) FY132_12420 PF00694 Aconitase C-terminal domain FY132_12425 PF00005 ABC transporter FY132_12430 PF03379 CcmB protein FY132_12435 PF01578 Cytochrome C assembly protein FY132_12445 PF08534 Redoxin FY132_12450 PF00990 Diguanylate cyclase, GGDEF domain FY132_12455 PF10755 Protein of unknown function (DUF2585) FY132_12460 PF04279 Intracellular septation protein A FY132_12465 PF02881 SRP54-type protein, helical bundle domain FY132_12465 PF00448 SRP54-type protein, GTPase domain FY132_12470 PF04055 Radical SAM superfamily FY132_12470 PF00919 Uncharacterized protein family UPF0004 FY132_12475 PF01678 Diaminopimelate epimerase FY132_12480 PF12706 Beta-lactamase superfamily domain FY132_12490 PF00448 SRP54-type protein, GTPase domain FY132_12490 PF02881 SRP54-type protein, helical bundle domain FY132_12490 PF02978 Signal peptide binding domain FY132_12495 PF01817 Chorismate mutase type II FY132_12495 PF02153 Prephenate dehydrogenase FY132_12500 PF00886 Ribosomal protein S16 FY132_12505 PF05239 PRC-barrel domain FY132_12505 PF01782 RimM N-terminal domain FY132_12510 PF01746 tRNA (Guanine-1)-methyltransferase FY132_12520 PF01245 Ribosomal protein L19 FY132_12525 PF00664 ABC transporter transmembrane region FY132_12525 PF00005 ABC transporter FY132_12530 PF00529 HlyD membrane-fusion protein of T1SS FY132_12530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_12540 PF07690 Major Facilitator Superfamily FY132_12545 PF00330 Aconitase family (aconitate hydratase) FY132_12560 PF01435 Peptidase family M48 FY132_12565 PF00005 ABC transporter FY132_12570 PF00528 Binding-protein-dependent transport system inner membrane component FY132_12575 PF01547 Bacterial extracellular solute-binding protein FY132_12585 PF16326 ABC transporter C-terminal domain FY132_12585 PF00005 ABC transporter FY132_12595 PF04204 Homoserine O-succinyltransferase FY132_12600 PF01263 Aldose 1-epimerase FY132_12605 PF00912 Transglycosylase FY132_12610 PF00348 Polyprenyl synthetase FY132_12615 PF13488 Glycine zipper FY132_12615 PF00691 OmpA family FY132_12620 PF04551 GcpE protein FY132_12625 PF07690 Major Facilitator Superfamily FY132_12630 PF00455 DeoR C terminal sensor domain FY132_12630 PF08220 DeoR-like helix-turn-helix domain FY132_12635 PF00289 Biotin carboxylase, N-terminal domain FY132_12635 PF00364 Biotin-requiring enzyme FY132_12635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_12635 PF00682 HMGL-like FY132_12635 PF02436 Conserved carboxylase domain FY132_12635 PF02785 Biotin carboxylase C-terminal domain FY132_12640 PF00196 Bacterial regulatory proteins, luxR family FY132_12640 PF00072 Response regulator receiver domain FY132_12645 PF00005 ABC transporter FY132_12645 PF00664 ABC transporter transmembrane region FY132_12655 PF06165 Glycosyltransferase family 36 FY132_12655 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY132_12655 PF10091 Putative glucoamylase FY132_12660 PF07687 Peptidase dimerisation domain FY132_12660 PF01546 Peptidase family M20/M25/M40 FY132_12665 PF01266 FAD dependent oxidoreductase FY132_12670 PF00291 Pyridoxal-phosphate dependent enzyme FY132_12675 PF00920 Dehydratase family FY132_12680 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY132_12680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY132_12685 PF01370 NAD dependent epimerase/dehydratase family FY132_12690 PF01565 FAD binding domain FY132_12690 PF02913 FAD linked oxidases, C-terminal domain FY132_12695 PF00392 Bacterial regulatory proteins, gntR family FY132_12695 PF07729 FCD domain FY132_12705 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY132_12710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY132_12715 PF03480 Bacterial extracellular solute-binding protein, family 7 FY132_12720 PF16177 Acetyl-coenzyme A synthetase N-terminus FY132_12720 PF00501 AMP-binding enzyme FY132_12720 PF13193 AMP-binding enzyme C-terminal domain FY132_12730 PF01168 Alanine racemase, N-terminal domain FY132_12735 PF08264 Anticodon-binding domain of tRNA FY132_12735 PF00133 tRNA synthetases class I (I, L, M and V) FY132_12735 PF13603 Leucyl-tRNA synthetase, Domain 2 FY132_12750 PF11953 Domain of unknown function (DUF3470) FY132_12750 PF00037 4Fe-4S binding domain FY132_12755 PF00579 tRNA synthetases class I (W and Y) FY132_12755 PF01479 S4 domain FY132_12770 PF01494 FAD binding domain FY132_12780 PF00543 Nitrogen regulatory protein P-II FY132_12785 PF00909 Ammonium Transporter Family FY132_12790 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY132_12790 PF17854 FtsK alpha domain FY132_12790 PF09397 Ftsk gamma domain FY132_12790 PF01580 FtsK/SpoIIIE family FY132_12795 PF03548 Outer membrane lipoprotein carrier protein LolA FY132_12810 PF00072 Response regulator receiver domain FY132_12810 PF00486 Transcriptional regulatory protein, C terminal FY132_12820 PF02559 CarD-like/TRCF domain FY132_12825 PF05088 Bacterial NAD-glutamate dehydrogenase FY132_12830 PF11700 Vacuole effluxer Atg22 like FY132_12835 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY132_12835 PF05233 PHB accumulation regulatory domain FY132_12840 PF02803 Thiolase, C-terminal domain FY132_12840 PF00108 Thiolase, N-terminal domain FY132_12855 PF00210 Ferritin-like domain FY132_12860 PF00293 NUDIX domain FY132_12865 PF04748 Divergent polysaccharide deacetylase FY132_12870 PF13180 PDZ domain FY132_12870 PF03572 Peptidase family S41 FY132_12880 PF02590 Predicted SPOUT methyltransferase FY132_12890 PF01467 Cytidylyltransferase-like FY132_12895 PF00171 Aldehyde dehydrogenase family FY132_12900 PF01472 PUA domain FY132_12900 PF00696 Amino acid kinase family FY132_12905 PF01018 GTP1/OBG FY132_12905 PF01926 50S ribosome-binding GTPase FY132_12910 PF13302 Acetyltransferase (GNAT) domain FY132_12920 PF01016 Ribosomal L27 protein FY132_12925 PF00829 Ribosomal prokaryotic L21 protein FY132_12940 PF03328 HpcH/HpaI aldolase/citrate lyase family FY132_12950 PF00694 Aconitase C-terminal domain FY132_12955 PF00180 Isocitrate/isopropylmalate dehydrogenase FY132_12960 PF03150 Di-haem cytochrome c peroxidase FY132_12965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY132_12965 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY132_12970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_12975 PF01888 CbiD FY132_12980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_12990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_12995 PF02571 Precorrin-6x reductase CbiJ/CobK FY132_13000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_13005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_13010 PF02570 Precorrin-8X methylmutase FY132_13015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY132_13020 PF02514 CobN/Magnesium Chelatase FY132_13025 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY132_13025 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY132_13035 PF12557 Cob(I)alamin adenosyltransferase N terminal FY132_13035 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY132_13040 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY132_13040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY132_13045 PF03186 CobD/Cbib protein FY132_13050 PF00155 Aminotransferase class I and II FY132_13055 PF13378 Enolase C-terminal domain-like FY132_13055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_13060 PF05336 L-rhamnose mutarotase FY132_13065 PF01232 Mannitol dehydrogenase Rossmann domain FY132_13065 PF08125 Mannitol dehydrogenase C-terminal domain FY132_13070 PF08240 Alcohol dehydrogenase GroES-like domain FY132_13070 PF00107 Zinc-binding dehydrogenase FY132_13080 PF00248 Aldo/keto reductase family FY132_13090 PF02653 Branched-chain amino acid transport system / permease component FY132_13095 PF00005 ABC transporter FY132_13100 PF00392 Bacterial regulatory proteins, gntR family FY132_13100 PF07729 FCD domain FY132_13105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY132_13105 PF08666 SAF domain FY132_13110 PF01808 AICARFT/IMPCHase bienzyme FY132_13110 PF02142 MGS-like domain FY132_13120 PF01189 16S rRNA methyltransferase RsmB/F FY132_13120 PF01029 NusB family FY132_13125 PF01435 Peptidase family M48 FY132_13135 PF17762 HTH domain found in ParB protein FY132_13135 PF02195 ParB-like nuclease domain FY132_13140 PF13614 AAA domain FY132_13145 PF02527 rRNA small subunit methyltransferase G FY132_13150 PF01134 Glucose inhibited division protein A FY132_13150 PF13932 GidA associated domain FY132_13155 PF01926 50S ribosome-binding GTPase FY132_13155 PF12631 MnmE helical domain FY132_13155 PF10396 GTP-binding protein TrmE N-terminus FY132_13160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY132_13160 PF07498 Rho termination factor, N-terminal domain FY132_13160 PF07497 Rho termination factor, RNA-binding domain FY132_13165 PF03653 Uncharacterised protein family (UPF0093) FY132_13170 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY132_13175 PF03618 Kinase/pyrophosphorylase FY132_13180 PF02545 Maf-like protein FY132_13185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY132_13185 PF01488 Shikimate / quinate 5-dehydrogenase FY132_13185 PF08501 Shikimate dehydrogenase substrate binding domain FY132_13190 PF01121 Dephospho-CoA kinase FY132_13195 PF00929 Exonuclease FY132_13200 PF02556 Preprotein translocase subunit SecB FY132_13205 PF04186 FxsA cytoplasmic membrane protein FY132_13215 PF06725 3D domain FY132_13215 PF03562 MltA specific insert domain FY132_13230 PF00204 DNA gyrase B FY132_13230 PF00986 DNA gyrase B subunit, carboxyl terminus FY132_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_13230 PF01751 Toprim domain FY132_13240 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY132_13255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY132_13260 PF00291 Pyridoxal-phosphate dependent enzyme FY132_13265 PF00290 Tryptophan synthase alpha chain FY132_13270 PF01039 Carboxyl transferase domain FY132_13275 PF08245 Mur ligase middle domain FY132_13275 PF02875 Mur ligase family, glutamate ligase domain FY132_13280 PF00085 Thioredoxin FY132_13285 PF12705 PD-(D/E)XK nuclease superfamily FY132_13285 PF00580 UvrD/REP helicase N-terminal domain FY132_13285 PF13361 UvrD-like helicase C-terminal domain FY132_13295 PF12804 MobA-like NTP transferase domain FY132_13300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY132_13305 PF00512 His Kinase A (phospho-acceptor) domain FY132_13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_13310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY132_13310 PF05221 S-adenosyl-L-homocysteine hydrolase FY132_13315 PF00381 PTS HPr component phosphorylation site FY132_13320 PF03610 PTS system fructose IIA component FY132_13320 PF03830 PTS system sorbose subfamily IIB component FY132_13325 PF07475 HPr Serine kinase C-terminal domain FY132_13325 PF02603 HPr Serine kinase N terminus FY132_13330 PF13756 Stimulus-sensing domain FY132_13330 PF13755 Sensor N-terminal transmembrane domain FY132_13330 PF00512 His Kinase A (phospho-acceptor) domain FY132_13330 PF00672 HAMP domain FY132_13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_13335 PF00486 Transcriptional regulatory protein, C terminal FY132_13335 PF00072 Response regulator receiver domain FY132_13340 PF01293 Phosphoenolpyruvate carboxykinase FY132_13345 PF00472 RF-1 domain FY132_13350 PF04972 BON domain FY132_13350 PF01476 LysM domain FY132_13355 PF00485 Phosphoribulokinase / Uridine kinase family FY132_13360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY132_13365 PF00977 Histidine biosynthesis protein FY132_13370 PF00977 Histidine biosynthesis protein FY132_13375 PF00117 Glutamine amidotransferase class-I FY132_13385 PF00475 Imidazoleglycerol-phosphate dehydratase FY132_13390 PF00227 Proteasome subunit FY132_13395 PF00004 ATPase family associated with various cellular activities (AAA) FY132_13395 PF07724 AAA domain (Cdc48 subfamily) FY132_13395 PF10431 C-terminal, D2-small domain, of ClpB protein FY132_13405 PF01274 Malate synthase FY132_13420 PF00072 Response regulator receiver domain FY132_13425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_13425 PF00512 His Kinase A (phospho-acceptor) domain FY132_13430 PF00270 DEAD/DEAH box helicase FY132_13430 PF04408 Helicase associated domain (HA2) FY132_13430 PF00271 Helicase conserved C-terminal domain FY132_13430 PF08482 ATP-dependent helicase C-terminal FY132_13470 PF09382 RQC domain FY132_13470 PF16124 RecQ zinc-binding FY132_13470 PF00570 HRDC domain FY132_13470 PF00271 Helicase conserved C-terminal domain FY132_13470 PF00270 DEAD/DEAH box helicase FY132_13475 PF00480 ROK family FY132_13480 PF13407 Periplasmic binding protein domain FY132_13485 PF02653 Branched-chain amino acid transport system / permease component FY132_13490 PF00005 ABC transporter FY132_13495 PF00485 Phosphoribulokinase / Uridine kinase family FY132_13500 PF00462 Glutaredoxin FY132_13505 PF07972 NrdI Flavodoxin like FY132_13510 PF02867 Ribonucleotide reductase, barrel domain FY132_13510 PF00317 Ribonucleotide reductase, all-alpha domain FY132_13510 PF08343 Ribonucleotide reductase N-terminal FY132_13515 PF00268 Ribonucleotide reductase, small chain FY132_13525 PF02463 RecF/RecN/SMC N terminal domain FY132_13530 PF00899 ThiF family FY132_13530 PF00581 Rhodanese-like domain FY132_13545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_13545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_13555 PF00294 pfkB family carbohydrate kinase FY132_13565 PF05175 Methyltransferase small domain FY132_13565 PF08468 Methyltransferase small domain N-terminal FY132_13570 PF00575 S1 RNA binding domain FY132_13570 PF01138 3' exoribonuclease family, domain 1 FY132_13570 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY132_13570 PF00013 KH domain FY132_13570 PF03725 3' exoribonuclease family, domain 2 FY132_13575 PF00312 Ribosomal protein S15 FY132_13580 PF09157 Pseudouridine synthase II TruB, C-terminal FY132_13580 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY132_13580 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY132_13585 PF02033 Ribosome-binding factor A FY132_13590 PF00009 Elongation factor Tu GTP binding domain FY132_13590 PF03144 Elongation factor Tu domain 2 FY132_13590 PF11987 Translation-initiation factor 2 FY132_13590 PF08364 Bacterial translation initiation factor IF-2 associated region FY132_13590 PF04760 Translation initiation factor IF-2, N-terminal region FY132_13600 PF00575 S1 RNA binding domain FY132_13600 PF13184 NusA-like KH domain FY132_13600 PF08529 NusA N-terminal domain FY132_13605 PF02576 RimP N-terminal domain FY132_13605 PF17384 RimP C-terminal SH3 domain FY132_13610 PF05977 Transmembrane secretion effector FY132_13620 PF13406 Transglycosylase SLT domain FY132_13625 PF02132 RecR protein FY132_13625 PF13662 Toprim domain FY132_13635 PF02575 YbaB/EbfC DNA-binding family FY132_13640 PF12169 DNA polymerase III subunits gamma and tau domain III FY132_13640 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY132_13640 PF12170 DNA polymerase III tau subunit V interacting with alpha FY132_13655 PF00293 NUDIX domain FY132_13655 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY132_13655 PF09297 NADH pyrophosphatase zinc ribbon domain FY132_13660 PF01817 Chorismate mutase type II FY132_13660 PF00800 Prephenate dehydratase FY132_13665 PF02348 Cytidylyltransferase FY132_13670 PF00034 Cytochrome c FY132_13675 PF02397 Bacterial sugar transferase FY132_13680 PF00912 Transglycosylase FY132_13680 PF00905 Penicillin binding protein transpeptidase domain FY132_13685 PF04073 Aminoacyl-tRNA editing domain FY132_13690 PF00313 'Cold-shock' DNA-binding domain FY132_13695 PF01546 Peptidase family M20/M25/M40 FY132_13695 PF07687 Peptidase dimerisation domain FY132_13700 PF01047 MarR family FY132_13705 PF01367 5'-3' exonuclease, C-terminal SAM fold FY132_13705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY132_13705 PF00476 DNA polymerase family A FY132_13705 PF01612 3'-5' exonuclease FY132_13710 PF01783 Ribosomal L32p protein family FY132_13715 PF02743 Cache domain FY132_13715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_13715 PF00512 His Kinase A (phospho-acceptor) domain FY132_13720 PF02954 Bacterial regulatory protein, Fis family FY132_13720 PF00072 Response regulator receiver domain FY132_13720 PF00158 Sigma-54 interaction domain FY132_13725 PF03401 Tripartite tricarboxylate transporter family receptor FY132_13730 PF07331 Tripartite tricarboxylate transporter TctB family FY132_13735 PF01970 Tripartite tricarboxylate transporter TctA family FY132_13740 PF04102 SlyX FY132_13750 PF00226 DnaJ domain FY132_13750 PF00684 DnaJ central domain FY132_13750 PF01556 DnaJ C terminal domain FY132_13755 PF00012 Hsp70 protein FY132_13770 PF01625 Peptide methionine sulfoxide reductase FY132_13775 PF02608 ABC transporter substrate-binding protein PnrA-like FY132_13780 PF00005 ABC transporter FY132_13785 PF02653 Branched-chain amino acid transport system / permease component FY132_13790 PF02653 Branched-chain amino acid transport system / permease component FY132_13795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY132_13800 PF01048 Phosphorylase superfamily FY132_13805 PF01791 DeoC/LacD family aldolase FY132_13810 PF02885 Glycosyl transferase family, helical bundle domain FY132_13810 PF00591 Glycosyl transferase family, a/b domain FY132_13810 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY132_13825 PF00962 Adenosine/AMP deaminase FY132_13830 PF01676 Metalloenzyme superfamily FY132_13840 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY132_13845 PF00510 Cytochrome c oxidase subunit III FY132_13850 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY132_13855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY132_13855 PF06481 COX Aromatic Rich Motif FY132_13860 PF00083 Sugar (and other) transporter FY132_13860 PF07690 Major Facilitator Superfamily FY132_13865 PF04898 Glutamate synthase central domain FY132_13865 PF01645 Conserved region in glutamate synthase FY132_13865 PF01493 GXGXG motif FY132_13865 PF00310 Glutamine amidotransferases class-II FY132_13870 PF00667 FAD binding domain FY132_13870 PF00258 Flavodoxin FY132_13870 PF00175 Oxidoreductase NAD-binding domain FY132_13890 PF00109 Beta-ketoacyl synthase, N-terminal domain FY132_13890 PF02801 Beta-ketoacyl synthase, C-terminal domain FY132_13895 PF07977 FabA-like domain FY132_13905 PF03458 UPF0126 domain FY132_13915 PF06912 Protein of unknown function (DUF1275) FY132_13925 PF00528 Binding-protein-dependent transport system inner membrane component FY132_13930 PF00005 ABC transporter FY132_13935 PF00392 Bacterial regulatory proteins, gntR family FY132_13935 PF07702 UTRA domain FY132_13940 PF01618 MotA/TolQ/ExbB proton channel family FY132_13945 PF02472 Biopolymer transport protein ExbD/TolR FY132_13955 PF02615 Malate/L-lactate dehydrogenase FY132_13970 PF00625 Guanylate kinase FY132_13975 PF07969 Amidohydrolase family FY132_13980 PF06299 Protein of unknown function (DUF1045) FY132_13985 PF00528 Binding-protein-dependent transport system inner membrane component FY132_13990 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14000 PF00005 ABC transporter FY132_14010 PF00005 ABC transporter FY132_14015 PF00005 ABC transporter FY132_14020 PF06007 Phosphonate metabolism protein PhnJ FY132_14025 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY132_14030 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY132_14035 PF06754 Phosphonate metabolism protein PhnG FY132_14040 PF00392 Bacterial regulatory proteins, gntR family FY132_14040 PF07702 UTRA domain FY132_14045 PF05173 Dihydrodipicolinate reductase, C-terminus FY132_14045 PF01113 Dihydrodipicolinate reductase, N-terminus FY132_14050 PF02685 Glucokinase FY132_14055 PF02142 MGS-like domain FY132_14060 PF03411 Penicillin-insensitive murein endopeptidase FY132_14065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_14070 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14075 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14075 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_14080 PF00005 ABC transporter FY132_14080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_14085 PF01266 FAD dependent oxidoreductase FY132_14090 PF00120 Glutamine synthetase, catalytic domain FY132_14095 PF01266 FAD dependent oxidoreductase FY132_14105 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14110 PF00005 ABC transporter FY132_14115 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY132_14130 PF02082 Transcriptional regulator FY132_14135 PF13416 Bacterial extracellular solute-binding protein FY132_14145 PF05987 Bacterial protein of unknown function (DUF898) FY132_14150 PF00171 Aldehyde dehydrogenase family FY132_14155 PF03466 LysR substrate binding domain FY132_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_14160 PF00892 EamA-like transporter family FY132_14175 PF00877 NlpC/P60 family FY132_14185 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY132_14185 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY132_14190 PF00883 Cytosol aminopeptidase family, catalytic domain FY132_14190 PF02789 Cytosol aminopeptidase family, N-terminal domain FY132_14210 PF00437 Type II/IV secretion system protein FY132_14225 PF13629 Pilus formation protein N terminal region FY132_14225 PF04972 BON domain FY132_14225 PF00263 Bacterial type II and III secretion system protein FY132_14265 PF00117 Glutamine amidotransferase class-I FY132_14270 PF07411 Domain of unknown function (DUF1508) FY132_14275 PF01183 Glycosyl hydrolases family 25 FY132_14280 PF00892 EamA-like transporter family FY132_14285 PF00155 Aminotransferase class I and II FY132_14285 PF00392 Bacterial regulatory proteins, gntR family FY132_14300 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_14315 PF00009 Elongation factor Tu GTP binding domain FY132_14315 PF00679 Elongation factor G C-terminus FY132_14315 PF03144 Elongation factor Tu domain 2 FY132_14315 PF06421 GTP-binding protein LepA C-terminus FY132_14320 PF00795 Carbon-nitrogen hydrolase FY132_14350 PF12833 Helix-turn-helix domain FY132_14350 PF02311 AraC-like ligand binding domain FY132_14355 PF03480 Bacterial extracellular solute-binding protein, family 7 FY132_14380 PF05198 Translation initiation factor IF-3, N-terminal domain FY132_14380 PF00707 Translation initiation factor IF-3, C-terminal domain FY132_14385 PF01632 Ribosomal protein L35 FY132_14390 PF00453 Ribosomal protein L20 FY132_14400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY132_14400 PF01409 tRNA synthetases class II core domain (F) FY132_14405 PF01588 Putative tRNA binding domain FY132_14405 PF03147 Ferredoxin-fold anticodon binding domain FY132_14405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY132_14405 PF03483 B3/4 domain FY132_14405 PF03484 tRNA synthetase B5 domain FY132_14410 PF00248 Aldo/keto reductase family FY132_14415 PF03466 LysR substrate binding domain FY132_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_14425 PF00248 Aldo/keto reductase family FY132_14430 PF12833 Helix-turn-helix domain FY132_14430 PF01965 DJ-1/PfpI family FY132_14440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_14440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_14455 PF02601 Exonuclease VII, large subunit FY132_14455 PF13742 OB-fold nucleic acid binding domain FY132_14460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_14460 PF13378 Enolase C-terminal domain-like FY132_14465 PF00392 Bacterial regulatory proteins, gntR family FY132_14465 PF07729 FCD domain FY132_14470 PF01047 MarR family FY132_14480 PF02073 Thermophilic metalloprotease (M29) FY132_14485 PF04073 Aminoacyl-tRNA editing domain FY132_14490 PF03960 ArsC family FY132_14505 PF00440 Bacterial regulatory proteins, tetR family FY132_14515 PF00958 GMP synthase C terminal domain FY132_14515 PF00117 Glutamine amidotransferase class-I FY132_14530 PF03073 TspO/MBR family FY132_14555 PF01189 16S rRNA methyltransferase RsmB/F FY132_14555 PF01029 NusB family FY132_14560 PF03330 Lytic transglycolase FY132_14570 PF08331 Domain of unknown function (DUF1730) FY132_14575 PF13417 Glutathione S-transferase, N-terminal domain FY132_14575 PF00043 Glutathione S-transferase, C-terminal domain FY132_14580 PF02673 Bacitracin resistance protein BacA FY132_14595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY132_14605 PF13649 Methyltransferase domain FY132_14610 PF02768 DNA polymerase III beta subunit, C-terminal domain FY132_14610 PF02767 DNA polymerase III beta subunit, central domain FY132_14610 PF00712 DNA polymerase III beta subunit, N-terminal domain FY132_14615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_14620 PF02021 Uncharacterised protein family UPF0102 FY132_14625 PF14602 Hexapeptide repeat of succinyl-transferase FY132_14625 PF12464 Maltose acetyltransferase FY132_14630 PF13416 Bacterial extracellular solute-binding protein FY132_14635 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14640 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14645 PF00005 ABC transporter FY132_14655 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY132_14655 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY132_14660 PF01078 Magnesium chelatase, subunit ChlI FY132_14660 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY132_14665 PF00291 Pyridoxal-phosphate dependent enzyme FY132_14670 PF01810 LysE type translocator FY132_14675 PF00692 dUTPase FY132_14680 PF00009 Elongation factor Tu GTP binding domain FY132_14680 PF16658 Class II release factor RF3, C-terminal domain FY132_14680 PF03144 Elongation factor Tu domain 2 FY132_14685 PF04127 DNA / pantothenate metabolism flavoprotein FY132_14685 PF02441 Flavoprotein FY132_14700 PF03109 ABC1 family FY132_14705 PF01209 ubiE/COQ5 methyltransferase family FY132_14710 PF06827 Zinc finger found in FPG and IleRS FY132_14710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY132_14710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY132_14715 PF00378 Enoyl-CoA hydratase/isomerase FY132_14720 PF01649 Ribosomal protein S20 FY132_14785 PF00005 ABC transporter FY132_14785 PF06472 ABC transporter transmembrane region 2 FY132_14810 PF01261 Xylose isomerase-like TIM barrel FY132_14815 PF00485 Phosphoribulokinase / Uridine kinase family FY132_14820 PF01261 Xylose isomerase-like TIM barrel FY132_14825 PF02653 Branched-chain amino acid transport system / permease component FY132_14830 PF02653 Branched-chain amino acid transport system / permease component FY132_14835 PF00005 ABC transporter FY132_14845 PF00356 Bacterial regulatory proteins, lacI family FY132_14855 PF00158 Sigma-54 interaction domain FY132_14855 PF02954 Bacterial regulatory protein, Fis family FY132_14855 PF01590 GAF domain FY132_14860 PF00107 Zinc-binding dehydrogenase FY132_14860 PF08240 Alcohol dehydrogenase GroES-like domain FY132_14870 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_14875 PF06434 Aconitate hydratase 2 N-terminus FY132_14875 PF00330 Aconitase family (aconitate hydratase) FY132_14875 PF11791 Aconitate B N-terminal domain FY132_14890 PF13954 PapC N-terminal domain FY132_14890 PF00577 Outer membrane usher protein FY132_14890 PF13953 PapC C-terminal domain FY132_14900 PF00005 ABC transporter FY132_14905 PF00664 ABC transporter transmembrane region FY132_14905 PF00005 ABC transporter FY132_14910 PF03401 Tripartite tricarboxylate transporter family receptor FY132_14915 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY132_14915 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY132_14925 PF05532 CsbD-like FY132_14945 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14950 PF00005 ABC transporter FY132_14950 PF17850 CysA C-terminal regulatory domain FY132_14960 PF00459 Inositol monophosphatase family FY132_14965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_14965 PF00005 ABC transporter FY132_14975 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14975 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_14980 PF00528 Binding-protein-dependent transport system inner membrane component FY132_14985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_14990 PF07729 FCD domain FY132_14990 PF00392 Bacterial regulatory proteins, gntR family FY132_15000 PF13378 Enolase C-terminal domain-like FY132_15000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_15005 PF00005 ABC transporter FY132_15005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_15010 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15010 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_15015 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_15025 PF07729 FCD domain FY132_15025 PF00392 Bacterial regulatory proteins, gntR family FY132_15030 PF08450 SMP-30/Gluconolactonase/LRE-like region FY132_15035 PF00701 Dihydrodipicolinate synthetase family FY132_15040 PF07690 Major Facilitator Superfamily FY132_15050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY132_15050 PF01568 Molydopterin dinucleotide binding domain FY132_15050 PF00384 Molybdopterin oxidoreductase FY132_15050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY132_15050 PF00037 4Fe-4S binding domain FY132_15055 PF00037 4Fe-4S binding domain FY132_15055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY132_15055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY132_15065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_15065 PF03466 LysR substrate binding domain FY132_15070 PF01613 Flavin reductase like domain FY132_15075 PF02530 Porin subfamily FY132_15080 PF03707 Bacterial signalling protein N terminal repeat FY132_15080 PF00990 Diguanylate cyclase, GGDEF domain FY132_15080 PF00563 EAL domain FY132_15085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_15085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_15090 PF00005 ABC transporter FY132_15095 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15100 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15105 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_15115 PF00356 Bacterial regulatory proteins, lacI family FY132_15120 PF05544 Proline racemase FY132_15130 PF01266 FAD dependent oxidoreductase FY132_15135 PF00005 ABC transporter FY132_15140 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15145 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15155 PF02615 Malate/L-lactate dehydrogenase FY132_15160 PF00701 Dihydrodipicolinate synthetase family FY132_15165 PF00392 Bacterial regulatory proteins, gntR family FY132_15165 PF07729 FCD domain FY132_15170 PF12327 FtsZ family, C-terminal domain FY132_15170 PF00091 Tubulin/FtsZ family, GTPase domain FY132_15175 PF00072 Response regulator receiver domain FY132_15195 PF00005 ABC transporter FY132_15200 PF13533 Biotin-lipoyl like FY132_15205 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY132_15205 PF02056 Family 4 glycosyl hydrolase FY132_15210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_15210 PF00005 ABC transporter FY132_15215 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_15215 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15220 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_15230 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY132_15230 PF02056 Family 4 glycosyl hydrolase FY132_15255 PF00480 ROK family FY132_15260 PF13416 Bacterial extracellular solute-binding protein FY132_15265 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15270 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15275 PF00206 Lyase FY132_15275 PF14698 Argininosuccinate lyase C-terminal FY132_15280 PF00005 ABC transporter FY132_15280 PF08402 TOBE domain FY132_15285 PF00294 pfkB family carbohydrate kinase FY132_15290 PF12411 Choline sulfatase enzyme C terminal FY132_15290 PF00884 Sulfatase FY132_15295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY132_15300 PF03466 LysR substrate binding domain FY132_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_15305 PF00005 ABC transporter FY132_15310 PF01032 FecCD transport family FY132_15315 PF01032 FecCD transport family FY132_15325 PF00593 TonB dependent receptor FY132_15325 PF07715 TonB-dependent Receptor Plug Domain FY132_15330 PF12833 Helix-turn-helix domain FY132_15335 PF00141 Peroxidase FY132_15340 PF03466 LysR substrate binding domain FY132_15340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_15350 PF00512 His Kinase A (phospho-acceptor) domain FY132_15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_15350 PF00672 HAMP domain FY132_15355 PF00072 Response regulator receiver domain FY132_15355 PF00486 Transcriptional regulatory protein, C terminal FY132_15360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_15360 PF00529 HlyD membrane-fusion protein of T1SS FY132_15365 PF00873 AcrB/AcrD/AcrF family FY132_15375 PF01865 Protein of unknown function DUF47 FY132_15380 PF01384 Phosphate transporter family FY132_15385 PF02735 Ku70/Ku80 beta-barrel domain FY132_15390 PF01068 ATP dependent DNA ligase domain FY132_15390 PF04679 ATP dependent DNA ligase C terminal region FY132_15390 PF13298 DNA polymerase Ligase (LigD) FY132_15395 PF02735 Ku70/Ku80 beta-barrel domain FY132_15410 PF13188 PAS domain FY132_15410 PF00990 Diguanylate cyclase, GGDEF domain FY132_15410 PF03707 Bacterial signalling protein N terminal repeat FY132_15410 PF00563 EAL domain FY132_15420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_15425 PF03786 D-mannonate dehydratase (UxuA) FY132_15430 PF07729 FCD domain FY132_15430 PF00392 Bacterial regulatory proteins, gntR family FY132_15435 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15440 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15440 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_15445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_15445 PF00005 ABC transporter FY132_15450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_15450 PF00005 ABC transporter FY132_15455 PF03459 TOBE domain FY132_15455 PF00005 ABC transporter FY132_15455 PF17912 MalK OB fold domain FY132_15460 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15465 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15475 PF01571 Aminomethyltransferase folate-binding domain FY132_15475 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY132_15475 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_15475 PF17806 Sarcosine oxidase A3 domain FY132_15480 PF00356 Bacterial regulatory proteins, lacI family FY132_15490 PF00580 UvrD/REP helicase N-terminal domain FY132_15490 PF13361 UvrD-like helicase C-terminal domain FY132_15495 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY132_15500 PF16363 GDP-mannose 4,6 dehydratase FY132_15505 PF04321 RmlD substrate binding domain FY132_15510 PF00483 Nucleotidyl transferase FY132_15525 PF05045 Rhamnan synthesis protein F FY132_15555 PF01370 NAD dependent epimerase/dehydratase family FY132_15560 PF13580 SIS domain FY132_15565 PF00535 Glycosyl transferase family 2 FY132_15565 PF01501 Glycosyl transferase family 8 FY132_15575 PF03275 UDP-galactopyranose mutase FY132_15580 PF00005 ABC transporter FY132_15580 PF00664 ABC transporter transmembrane region FY132_15590 PF03466 LysR substrate binding domain FY132_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_15595 PF00248 Aldo/keto reductase family FY132_15610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY132_15610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY132_15615 PF00037 4Fe-4S binding domain FY132_15615 PF11953 Domain of unknown function (DUF3470) FY132_15625 PF12833 Helix-turn-helix domain FY132_15625 PF12852 Cupin FY132_15630 PF00106 short chain dehydrogenase FY132_15635 PF03009 Glycerophosphoryl diester phosphodiesterase family FY132_15640 PF00480 ROK family FY132_15640 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY132_15650 PF16220 Domain of unknown function (DUF4880) FY132_15650 PF04773 FecR protein FY132_15655 PF00593 TonB dependent receptor FY132_15655 PF07715 TonB-dependent Receptor Plug Domain FY132_15660 PF07690 Major Facilitator Superfamily FY132_15680 PF07470 Glycosyl Hydrolase Family 88 FY132_15690 PF17912 MalK OB fold domain FY132_15690 PF00005 ABC transporter FY132_15695 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15700 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15705 PF00356 Bacterial regulatory proteins, lacI family FY132_15715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_15715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_15720 PF01261 Xylose isomerase-like TIM barrel FY132_15725 PF13407 Periplasmic binding protein domain FY132_15730 PF13407 Periplasmic binding protein domain FY132_15735 PF00356 Bacterial regulatory proteins, lacI family FY132_15740 PF00108 Thiolase, N-terminal domain FY132_15740 PF02803 Thiolase, C-terminal domain FY132_15745 PF01144 Coenzyme A transferase FY132_15750 PF01144 Coenzyme A transferase FY132_15755 PF01614 Bacterial transcriptional regulator FY132_15755 PF09339 IclR helix-turn-helix domain FY132_15765 PF01494 FAD binding domain FY132_15770 PF03466 LysR substrate binding domain FY132_15770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_15775 PF00561 alpha/beta hydrolase fold FY132_15780 PF02627 Carboxymuconolactone decarboxylase family FY132_15785 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY132_15785 PF00775 Dioxygenase FY132_15790 PF00775 Dioxygenase FY132_15795 PF00206 Lyase FY132_15795 PF10397 Adenylosuccinate lyase C-terminus FY132_15800 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15805 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15810 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_15815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_15820 PF00005 ABC transporter FY132_15825 PF08501 Shikimate dehydrogenase substrate binding domain FY132_15825 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY132_15830 PF01220 Dehydroquinase class II FY132_15840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_15840 PF01261 Xylose isomerase-like TIM barrel FY132_15855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_15855 PF00005 ABC transporter FY132_15860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_15865 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15870 PF00528 Binding-protein-dependent transport system inner membrane component FY132_15870 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_15885 PF13458 Periplasmic binding protein FY132_15900 PF00005 ABC transporter FY132_15900 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_15905 PF00005 ABC transporter FY132_15915 PF00294 pfkB family carbohydrate kinase FY132_15920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY132_15920 PF00205 Thiamine pyrophosphate enzyme, central domain FY132_15920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY132_15925 PF01261 Xylose isomerase-like TIM barrel FY132_15930 PF04962 KduI/IolB family FY132_15935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_15935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_15940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_15940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_15945 PF00356 Bacterial regulatory proteins, lacI family FY132_15950 PF01047 MarR family FY132_15955 PF02633 Creatinine amidohydrolase FY132_15960 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY132_15960 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY132_15980 PF13505 Outer membrane protein beta-barrel domain FY132_16000 PF03824 High-affinity nickel-transport protein FY132_16020 PF01081 KDPG and KHG aldolase FY132_16025 PF01928 CYTH domain FY132_16035 PF00581 Rhodanese-like domain FY132_16035 PF17773 UPF0176 acylphosphatase like domain FY132_16040 PF00563 EAL domain FY132_16040 PF13188 PAS domain FY132_16040 PF00990 Diguanylate cyclase, GGDEF domain FY132_16040 PF03707 Bacterial signalling protein N terminal repeat FY132_16045 PF03180 NLPA lipoprotein FY132_16050 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16055 PF09383 NIL domain FY132_16055 PF00005 ABC transporter FY132_16060 PF00881 Nitroreductase family FY132_16065 PF00232 Glycosyl hydrolase family 1 FY132_16070 PF01261 Xylose isomerase-like TIM barrel FY132_16075 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_16075 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_16080 PF00356 Bacterial regulatory proteins, lacI family FY132_16080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY132_16090 PF07690 Major Facilitator Superfamily FY132_16095 PF13533 Biotin-lipoyl like FY132_16100 PF00440 Bacterial regulatory proteins, tetR family FY132_16105 PF03471 Transporter associated domain FY132_16105 PF03741 Integral membrane protein TerC family FY132_16110 PF02080 TrkA-C domain FY132_16110 PF03600 Citrate transporter FY132_16115 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY132_16120 PF01336 OB-fold nucleic acid binding domain FY132_16120 PF00152 tRNA synthetases class II (D, K and N) FY132_16125 PF01734 Patatin-like phospholipase FY132_16135 PF01297 Zinc-uptake complex component A periplasmic FY132_16140 PF00005 ABC transporter FY132_16145 PF00950 ABC 3 transport family FY132_16150 PF00950 ABC 3 transport family FY132_16165 PF01614 Bacterial transcriptional regulator FY132_16165 PF09339 IclR helix-turn-helix domain FY132_16170 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY132_16175 PF04198 Putative sugar-binding domain FY132_16175 PF13936 Helix-turn-helix domain FY132_16190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY132_16190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY132_16200 PF10576 Iron-sulfur binding domain of endonuclease III FY132_16200 PF00633 Helix-hairpin-helix motif FY132_16200 PF00730 HhH-GPD superfamily base excision DNA repair protein FY132_16215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_16215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_16220 PF13419 Haloacid dehalogenase-like hydrolase FY132_16225 PF08125 Mannitol dehydrogenase C-terminal domain FY132_16225 PF01232 Mannitol dehydrogenase Rossmann domain FY132_16235 PF00005 ABC transporter FY132_16235 PF08402 TOBE domain FY132_16240 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16245 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16255 PF04198 Putative sugar-binding domain FY132_16260 PF00005 ABC transporter FY132_16260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_16265 PF01546 Peptidase family M20/M25/M40 FY132_16265 PF07687 Peptidase dimerisation domain FY132_16270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_16275 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16280 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_16280 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16290 PF01965 DJ-1/PfpI family FY132_16295 PF01425 Amidase FY132_16300 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_16300 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16305 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_16315 PF03466 LysR substrate binding domain FY132_16315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_16320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_16320 PF00005 ABC transporter FY132_16325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_16325 PF00005 ABC transporter FY132_16330 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_16330 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16335 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_16345 PF01244 Membrane dipeptidase (Peptidase family M19) FY132_16355 PF01546 Peptidase family M20/M25/M40 FY132_16355 PF07687 Peptidase dimerisation domain FY132_16360 PF07690 Major Facilitator Superfamily FY132_16365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_16365 PF03466 LysR substrate binding domain FY132_16370 PF13382 Adenine deaminase C-terminal domain FY132_16370 PF01979 Amidohydrolase family FY132_16380 PF08402 TOBE domain FY132_16380 PF00005 ABC transporter FY132_16390 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16400 PF00356 Bacterial regulatory proteins, lacI family FY132_16405 PF03466 LysR substrate binding domain FY132_16405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_16410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_16410 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_16410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_16415 PF07715 TonB-dependent Receptor Plug Domain FY132_16425 PF00296 Luciferase-like monooxygenase FY132_16430 PF00005 ABC transporter FY132_16435 PF01032 FecCD transport family FY132_16440 PF01032 FecCD transport family FY132_16450 PF08021 Siderophore-interacting FAD-binding domain FY132_16450 PF04954 Siderophore-interacting protein FY132_16460 PF00975 Thioesterase domain FY132_16460 PF00550 Phosphopantetheine attachment site FY132_16460 PF00501 AMP-binding enzyme FY132_16460 PF13193 AMP-binding enzyme C-terminal domain FY132_16460 PF00668 Condensation domain FY132_16465 PF00501 AMP-binding enzyme FY132_16465 PF00668 Condensation domain FY132_16465 PF00550 Phosphopantetheine attachment site FY132_16465 PF00975 Thioesterase domain FY132_16470 PF00668 Condensation domain FY132_16470 PF13193 AMP-binding enzyme C-terminal domain FY132_16470 PF00550 Phosphopantetheine attachment site FY132_16470 PF00501 AMP-binding enzyme FY132_16475 PF00425 chorismate binding enzyme FY132_16480 PF00501 AMP-binding enzyme FY132_16480 PF13193 AMP-binding enzyme C-terminal domain FY132_16485 PF00857 Isochorismatase family FY132_16485 PF00550 Phosphopantetheine attachment site FY132_16495 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY132_16495 PF01648 4'-phosphopantetheinyl transferase superfamily FY132_16505 PF03264 NapC/NirT cytochrome c family, N-terminal region FY132_16510 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY132_16515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY132_16515 PF00384 Molybdopterin oxidoreductase FY132_16515 PF01568 Molydopterin dinucleotide binding domain FY132_16530 PF06796 Periplasmic nitrate reductase protein NapE FY132_16540 PF00005 ABC transporter FY132_16565 PF01136 Peptidase family U32 FY132_16575 PF04343 Protein of unknown function, DUF488 FY132_16580 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY132_16585 PF02441 Flavoprotein FY132_16595 PF00510 Cytochrome c oxidase subunit III FY132_16605 PF00034 Cytochrome c FY132_16610 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY132_16615 PF07728 AAA domain (dynein-related subfamily) FY132_16615 PF08406 CbbQ/NirQ/NorQ C-terminal FY132_16620 PF00092 von Willebrand factor type A domain FY132_16640 PF07732 Multicopper oxidase FY132_16640 PF00394 Multicopper oxidase FY132_16655 PF00034 Cytochrome c FY132_16675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_16675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_16685 PF00356 Bacterial regulatory proteins, lacI family FY132_16690 PF02653 Branched-chain amino acid transport system / permease component FY132_16695 PF02653 Branched-chain amino acid transport system / permease component FY132_16700 PF00005 ABC transporter FY132_16705 PF13407 Periplasmic binding protein domain FY132_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_16715 PF03466 LysR substrate binding domain FY132_16730 PF00356 Bacterial regulatory proteins, lacI family FY132_16735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_16735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_16740 PF01261 Xylose isomerase-like TIM barrel FY132_16745 PF13416 Bacterial extracellular solute-binding protein FY132_16750 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16755 PF00528 Binding-protein-dependent transport system inner membrane component FY132_16760 PF00005 ABC transporter FY132_16760 PF17912 MalK OB fold domain FY132_16760 PF03459 TOBE domain FY132_16775 PF03741 Integral membrane protein TerC family FY132_16775 PF03471 Transporter associated domain FY132_16780 PF00356 Bacterial regulatory proteins, lacI family FY132_16795 PF00459 Inositol monophosphatase family FY132_16800 PF00563 EAL domain FY132_16800 PF13188 PAS domain FY132_16800 PF03707 Bacterial signalling protein N terminal repeat FY132_16800 PF00990 Diguanylate cyclase, GGDEF domain FY132_16825 PF04717 Type VI secretion system, phage-baseplate injector FY132_16845 PF10431 C-terminal, D2-small domain, of ClpB protein FY132_16845 PF00004 ATPase family associated with various cellular activities (AAA) FY132_16845 PF17871 AAA lid domain FY132_16845 PF07724 AAA domain (Cdc48 subfamily) FY132_16855 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY132_16860 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY132_16880 PF05947 Type VI secretion system, TssF FY132_16895 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY132_16900 PF00691 OmpA family FY132_16905 PF06761 Intracellular multiplication and human macrophage-killing FY132_16905 PF14331 ImcF-related N-terminal domain FY132_16905 PF06744 Type VI secretion protein IcmF C-terminal FY132_16915 PF07238 PilZ domain FY132_16915 PF00069 Protein kinase domain FY132_16920 PF02563 Polysaccharide biosynthesis/export protein FY132_16930 PF00083 Sugar (and other) transporter FY132_16930 PF08946 Osmosensory transporter coiled coil FY132_16940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_16940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_16945 PF00106 short chain dehydrogenase FY132_16950 PF02653 Branched-chain amino acid transport system / permease component FY132_16955 PF00005 ABC transporter FY132_16960 PF13407 Periplasmic binding protein domain FY132_16965 PF12833 Helix-turn-helix domain FY132_16970 PF08240 Alcohol dehydrogenase GroES-like domain FY132_16970 PF00107 Zinc-binding dehydrogenase FY132_16985 PF00005 ABC transporter FY132_16995 PF00245 Alkaline phosphatase FY132_17000 PF00440 Bacterial regulatory proteins, tetR family FY132_17015 PF00551 Formyl transferase FY132_17020 PF00464 Serine hydroxymethyltransferase FY132_17030 PF01571 Aminomethyltransferase folate-binding domain FY132_17030 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY132_17030 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_17030 PF17806 Sarcosine oxidase A3 domain FY132_17040 PF01266 FAD dependent oxidoreductase FY132_17055 PF00701 Dihydrodipicolinate synthetase family FY132_17060 PF00171 Aldehyde dehydrogenase family FY132_17065 PF01266 FAD dependent oxidoreductase FY132_17075 PF00571 CBS domain FY132_17075 PF00005 ABC transporter FY132_17080 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17085 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17090 PF05544 Proline racemase FY132_17095 PF03807 NADP oxidoreductase coenzyme F420-dependent FY132_17095 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY132_17105 PF00970 Oxidoreductase FAD-binding domain FY132_17105 PF00111 2Fe-2S iron-sulfur cluster binding domain FY132_17105 PF00175 Oxidoreductase NAD-binding domain FY132_17110 PF00355 Rieske [2Fe-2S] domain FY132_17110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY132_17130 PF01638 HxlR-like helix-turn-helix FY132_17135 PF08240 Alcohol dehydrogenase GroES-like domain FY132_17135 PF00107 Zinc-binding dehydrogenase FY132_17140 PF13382 Adenine deaminase C-terminal domain FY132_17140 PF01979 Amidohydrolase family FY132_17155 PF00005 ABC transporter FY132_17180 PF07690 Major Facilitator Superfamily FY132_17190 PF01979 Amidohydrolase family FY132_17195 PF00817 impB/mucB/samB family FY132_17195 PF11799 impB/mucB/samB family C-terminal domain FY132_17215 PF00005 ABC transporter FY132_17215 PF17912 MalK OB fold domain FY132_17220 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17225 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17250 PF00455 DeoR C terminal sensor domain FY132_17250 PF08220 DeoR-like helix-turn-helix domain FY132_17255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_17255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_17260 PF00005 ABC transporter FY132_17265 PF02653 Branched-chain amino acid transport system / permease component FY132_17270 PF13407 Periplasmic binding protein domain FY132_17275 PF00480 ROK family FY132_17275 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY132_17285 PF01177 Asp/Glu/Hydantoin racemase FY132_17290 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17295 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17305 PF08402 TOBE domain FY132_17305 PF00005 ABC transporter FY132_17325 PF00196 Bacterial regulatory proteins, luxR family FY132_17335 PF00672 HAMP domain FY132_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_17335 PF00512 His Kinase A (phospho-acceptor) domain FY132_17340 PF00072 Response regulator receiver domain FY132_17340 PF00486 Transcriptional regulatory protein, C terminal FY132_17360 PF00005 ABC transporter FY132_17360 PF02687 FtsX-like permease family FY132_17360 PF12704 MacB-like periplasmic core domain FY132_17370 PF03466 LysR substrate binding domain FY132_17370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_17380 PF00510 Cytochrome c oxidase subunit III FY132_17385 PF00510 Cytochrome c oxidase subunit III FY132_17390 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY132_17395 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY132_17400 PF00034 Cytochrome c FY132_17415 PF02910 Fumarate reductase flavoprotein C-term FY132_17415 PF00890 FAD binding domain FY132_17420 PF00732 GMC oxidoreductase FY132_17420 PF05199 GMC oxidoreductase FY132_17425 PF00732 GMC oxidoreductase FY132_17425 PF05199 GMC oxidoreductase FY132_17430 PF03459 TOBE domain FY132_17430 PF00005 ABC transporter FY132_17430 PF17912 MalK OB fold domain FY132_17435 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17440 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17445 PF01547 Bacterial extracellular solute-binding protein FY132_17450 PF00171 Aldehyde dehydrogenase family FY132_17455 PF00378 Enoyl-CoA hydratase/isomerase FY132_17460 PF01144 Coenzyme A transferase FY132_17465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_17465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_17470 PF00356 Bacterial regulatory proteins, lacI family FY132_17475 PF03928 Haem-degrading FY132_17480 PF07715 TonB-dependent Receptor Plug Domain FY132_17485 PF01497 Periplasmic binding protein FY132_17490 PF01032 FecCD transport family FY132_17495 PF01032 FecCD transport family FY132_17500 PF00005 ABC transporter FY132_17515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_17515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_17520 PF04324 BFD-like [2Fe-2S] binding domain FY132_17520 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_17525 PF04324 BFD-like [2Fe-2S] binding domain FY132_17525 PF01266 FAD dependent oxidoreductase FY132_17530 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17535 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17540 PF08402 TOBE domain FY132_17540 PF00005 ABC transporter FY132_17555 PF00795 Carbon-nitrogen hydrolase FY132_17560 PF03466 LysR substrate binding domain FY132_17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_17565 PF00857 Isochorismatase family FY132_17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_17570 PF03466 LysR substrate binding domain FY132_17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_17580 PF03466 LysR substrate binding domain FY132_17585 PF05163 DinB family FY132_17590 PF00293 NUDIX domain FY132_17595 PF02567 Phenazine biosynthesis-like protein FY132_17610 PF00392 Bacterial regulatory proteins, gntR family FY132_17610 PF00155 Aminotransferase class I and II FY132_17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_17620 PF03466 LysR substrate binding domain FY132_17635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_17640 PF00881 Nitroreductase family FY132_17655 PF01323 DSBA-like thioredoxin domain FY132_17660 PF02913 FAD linked oxidases, C-terminal domain FY132_17660 PF01565 FAD binding domain FY132_17665 PF00384 Molybdopterin oxidoreductase FY132_17665 PF01568 Molydopterin dinucleotide binding domain FY132_17670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_17675 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17680 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17680 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_17685 PF00005 ABC transporter FY132_17685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_17695 PF00296 Luciferase-like monooxygenase FY132_17700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY132_17705 PF03358 NADPH-dependent FMN reductase FY132_17720 PF01053 Cys/Met metabolism PLP-dependent enzyme FY132_17725 PF01037 Lrp/AsnC ligand binding domain FY132_17730 PF02733 Dak1 domain FY132_17740 PF00106 short chain dehydrogenase FY132_17745 PF02798 Glutathione S-transferase, N-terminal domain FY132_17750 PF00873 AcrB/AcrD/AcrF family FY132_17755 PF13533 Biotin-lipoyl like FY132_17760 PF00440 Bacterial regulatory proteins, tetR family FY132_17765 PF00109 Beta-ketoacyl synthase, N-terminal domain FY132_17765 PF02801 Beta-ketoacyl synthase, C-terminal domain FY132_17770 PF12327 FtsZ family, C-terminal domain FY132_17770 PF00091 Tubulin/FtsZ family, GTPase domain FY132_17785 PF01554 MatE FY132_17805 PF00753 Metallo-beta-lactamase superfamily FY132_17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_17810 PF03466 LysR substrate binding domain FY132_17820 PF01638 HxlR-like helix-turn-helix FY132_17830 PF12704 MacB-like periplasmic core domain FY132_17830 PF02687 FtsX-like permease family FY132_17830 PF00005 ABC transporter FY132_17835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_17840 PF00989 PAS fold FY132_17840 PF00512 His Kinase A (phospho-acceptor) domain FY132_17840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_17840 PF11808 Phosphate regulon sensor protein PhoR FY132_17845 PF00072 Response regulator receiver domain FY132_17845 PF00486 Transcriptional regulatory protein, C terminal FY132_17865 PF03527 RHS protein FY132_17865 PF05593 RHS Repeat FY132_17885 PF04717 Type VI secretion system, phage-baseplate injector FY132_17895 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17895 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_17920 PF13784 Fic/DOC family N-terminal FY132_17920 PF02661 Fic/DOC family FY132_17935 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_17940 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17945 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_17975 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17980 PF00528 Binding-protein-dependent transport system inner membrane component FY132_17980 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_17985 PF00005 ABC transporter FY132_17985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_17990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_17990 PF00005 ABC transporter FY132_18000 PF00890 FAD binding domain FY132_18000 PF02910 Fumarate reductase flavoprotein C-term FY132_18010 PF13407 Periplasmic binding protein domain FY132_18015 PF00005 ABC transporter FY132_18020 PF02653 Branched-chain amino acid transport system / permease component FY132_18035 PF00248 Aldo/keto reductase family FY132_18040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_18040 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_18040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY132_18045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_18045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY132_18055 PF00296 Luciferase-like monooxygenase FY132_18060 PF02653 Branched-chain amino acid transport system / permease component FY132_18065 PF02653 Branched-chain amino acid transport system / permease component FY132_18070 PF00005 ABC transporter FY132_18080 PF00296 Luciferase-like monooxygenase FY132_18085 PF00005 ABC transporter FY132_18085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_18090 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18090 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_18095 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_18105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_18110 PF00296 Luciferase-like monooxygenase FY132_18120 PF00296 Luciferase-like monooxygenase FY132_18125 PF00296 Luciferase-like monooxygenase FY132_18130 PF00291 Pyridoxal-phosphate dependent enzyme FY132_18155 PF13173 AAA domain FY132_18155 PF13635 Domain of unknown function (DUF4143) FY132_18165 PF01850 PIN domain FY132_18170 PF00701 Dihydrodipicolinate synthetase family FY132_18175 PF00155 Aminotransferase class I and II FY132_18185 PF05378 Hydantoinase/oxoprolinase N-terminal region FY132_18185 PF01968 Hydantoinase/oxoprolinase FY132_18190 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_18195 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18200 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18205 PF00005 ABC transporter FY132_18215 PF07729 FCD domain FY132_18215 PF00392 Bacterial regulatory proteins, gntR family FY132_18235 PF01047 MarR family FY132_18250 PF03466 LysR substrate binding domain FY132_18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_18255 PF00106 short chain dehydrogenase FY132_18275 PF00171 Aldehyde dehydrogenase family FY132_18280 PF08240 Alcohol dehydrogenase GroES-like domain FY132_18280 PF00107 Zinc-binding dehydrogenase FY132_18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_18285 PF03466 LysR substrate binding domain FY132_18305 PF01810 LysE type translocator FY132_18310 PF13426 PAS domain FY132_18310 PF13581 Histidine kinase-like ATPase domain FY132_18310 PF07536 HWE histidine kinase FY132_18335 PF18011 C-terminal domain found in long catalases FY132_18335 PF06628 Catalase-related immune-responsive FY132_18335 PF00199 Catalase FY132_18355 PF00313 'Cold-shock' DNA-binding domain FY132_18385 PF00107 Zinc-binding dehydrogenase FY132_18385 PF08240 Alcohol dehydrogenase GroES-like domain FY132_18390 PF00561 alpha/beta hydrolase fold FY132_18395 PF00106 short chain dehydrogenase FY132_18400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY132_18405 PF00106 short chain dehydrogenase FY132_18410 PF00440 Bacterial regulatory proteins, tetR family FY132_18425 PF01810 LysE type translocator FY132_18435 PF02525 Flavodoxin-like fold FY132_18480 PF01551 Peptidase family M23 FY132_18480 PF10145 Phage-related minor tail protein FY132_18480 PF01464 Transglycosylase SLT domain FY132_18485 PF00004 ATPase family associated with various cellular activities (AAA) FY132_18485 PF07724 AAA domain (Cdc48 subfamily) FY132_18485 PF17871 AAA lid domain FY132_18485 PF02861 Clp amino terminal domain, pathogenicity island component FY132_18485 PF10431 C-terminal, D2-small domain, of ClpB protein FY132_18495 PF05175 Methyltransferase small domain FY132_18495 PF17827 PrmC N-terminal domain FY132_18500 PF03462 PCRF domain FY132_18500 PF00472 RF-1 domain FY132_18505 PF05524 PEP-utilising enzyme, N-terminal FY132_18505 PF01590 GAF domain FY132_18505 PF02896 PEP-utilising enzyme, TIM barrel domain FY132_18505 PF00391 PEP-utilising enzyme, mobile domain FY132_18510 PF13840 ACT domain FY132_18510 PF00696 Amino acid kinase family FY132_18510 PF01842 ACT domain FY132_18515 PF00270 DEAD/DEAH box helicase FY132_18515 PF00271 Helicase conserved C-terminal domain FY132_18520 PF16653 Saccharopine dehydrogenase C-terminal domain FY132_18520 PF03435 Saccharopine dehydrogenase NADP binding domain FY132_18525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY132_18540 PF16363 GDP-mannose 4,6 dehydratase FY132_18550 PF13426 PAS domain FY132_18550 PF07536 HWE histidine kinase FY132_18555 PF07536 HWE histidine kinase FY132_18555 PF08447 PAS fold FY132_18555 PF13426 PAS domain FY132_18560 PF00072 Response regulator receiver domain FY132_18570 PF04542 Sigma-70 region 2 FY132_18570 PF08281 Sigma-70, region 4 FY132_18575 PF01037 Lrp/AsnC ligand binding domain FY132_18580 PF00171 Aldehyde dehydrogenase family FY132_18580 PF01619 Proline dehydrogenase FY132_18580 PF14850 DNA-binding domain of Proline dehydrogenase FY132_18580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY132_18585 PF00005 ABC transporter FY132_18590 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18595 PF09084 NMT1/THI5 like FY132_18600 PF00171 Aldehyde dehydrogenase family FY132_18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_18605 PF03466 LysR substrate binding domain FY132_18610 PF13409 Glutathione S-transferase, N-terminal domain FY132_18625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY132_18625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY132_18625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY132_18630 PF16363 GDP-mannose 4,6 dehydratase FY132_18635 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY132_18635 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY132_18655 PF01965 DJ-1/PfpI family FY132_18675 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY132_18675 PF01266 FAD dependent oxidoreductase FY132_18685 PF05974 Domain of unknown function (DUF892) FY132_18690 PF01011 PQQ enzyme repeat FY132_18710 PF00501 AMP-binding enzyme FY132_18710 PF13193 AMP-binding enzyme C-terminal domain FY132_18715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY132_18715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY132_18720 PF05199 GMC oxidoreductase FY132_18720 PF00732 GMC oxidoreductase FY132_18725 PF11862 Domain of unknown function (DUF3382) FY132_18725 PF02653 Branched-chain amino acid transport system / permease component FY132_18730 PF02653 Branched-chain amino acid transport system / permease component FY132_18735 PF00005 ABC transporter FY132_18740 PF00005 ABC transporter FY132_18740 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_18755 PF00296 Luciferase-like monooxygenase FY132_18760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_18760 PF13378 Enolase C-terminal domain-like FY132_18765 PF00392 Bacterial regulatory proteins, gntR family FY132_18765 PF07729 FCD domain FY132_18770 PF08125 Mannitol dehydrogenase C-terminal domain FY132_18770 PF01232 Mannitol dehydrogenase Rossmann domain FY132_18775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_18775 PF00005 ABC transporter FY132_18780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_18780 PF00005 ABC transporter FY132_18785 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_18785 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18790 PF00528 Binding-protein-dependent transport system inner membrane component FY132_18795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_18800 PF01321 Creatinase/Prolidase N-terminal domain FY132_18800 PF00557 Metallopeptidase family M24 FY132_18805 PF00106 short chain dehydrogenase FY132_18835 PF00575 S1 RNA binding domain FY132_18840 PF02224 Cytidylate kinase FY132_18870 PF02445 Quinolinate synthetase A protein FY132_18875 PF02910 Fumarate reductase flavoprotein C-term FY132_18875 PF00890 FAD binding domain FY132_18880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY132_18880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY132_18900 PF08173 Membrane bound YbgT-like protein FY132_18905 PF02322 Cytochrome bd terminal oxidase subunit II FY132_18910 PF01654 Cytochrome bd terminal oxidase subunit I FY132_18915 PF00005 ABC transporter FY132_18915 PF00664 ABC transporter transmembrane region FY132_18920 PF00664 ABC transporter transmembrane region FY132_18920 PF00005 ABC transporter FY132_18930 PF08240 Alcohol dehydrogenase GroES-like domain FY132_18930 PF00107 Zinc-binding dehydrogenase FY132_18940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY132_18940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY132_18950 PF01037 Lrp/AsnC ligand binding domain FY132_18955 PF01177 Asp/Glu/Hydantoin racemase FY132_18970 PF00343 Carbohydrate phosphorylase FY132_18975 PF00128 Alpha amylase, catalytic domain FY132_18975 PF02806 Alpha amylase, C-terminal all-beta domain FY132_18975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY132_18980 PF00483 Nucleotidyl transferase FY132_18985 PF08323 Starch synthase catalytic domain FY132_18985 PF00534 Glycosyl transferases group 1 FY132_18990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY132_18990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY132_18990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY132_18990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY132_18995 PF18390 Glycogen debranching enzyme C-terminal domain FY132_18995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY132_18995 PF00128 Alpha amylase, catalytic domain FY132_19000 PF01575 MaoC like domain FY132_19025 PF01571 Aminomethyltransferase folate-binding domain FY132_19025 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY132_19025 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_19025 PF17806 Sarcosine oxidase A3 domain FY132_19040 PF01266 FAD dependent oxidoreductase FY132_19045 PF01165 Ribosomal protein S21 FY132_19060 PF11089 Exopolysaccharide production repressor FY132_19065 PF00535 Glycosyl transferase family 2 FY132_19070 PF04230 Polysaccharide pyruvyl transferase FY132_19075 PF00535 Glycosyl transferase family 2 FY132_19080 PF01943 Polysaccharide biosynthesis protein FY132_19085 PF01757 Acyltransferase family FY132_19090 PF00722 Glycosyl hydrolases family 16 FY132_19100 PF00535 Glycosyl transferase family 2 FY132_19105 PF00535 Glycosyl transferase family 2 FY132_19110 PF00535 Glycosyl transferase family 2 FY132_19115 PF00483 Nucleotidyl transferase FY132_19120 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY132_19120 PF13807 G-rich domain on putative tyrosine kinase FY132_19120 PF02706 Chain length determinant protein FY132_19125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_19130 PF13426 PAS domain FY132_19130 PF00072 Response regulator receiver domain FY132_19145 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19150 PF00571 CBS domain FY132_19150 PF00005 ABC transporter FY132_19155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY132_19155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_19160 PF01205 Uncharacterized protein family UPF0029 FY132_19165 PF00849 RNA pseudouridylate synthase FY132_19170 PF04445 Putative SAM-dependent methyltransferase FY132_19180 PF07995 Glucose / Sorbosone dehydrogenase FY132_19190 PF00196 Bacterial regulatory proteins, luxR family FY132_19190 PF00072 Response regulator receiver domain FY132_19195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_19195 PF07730 Histidine kinase FY132_19200 PF13407 Periplasmic binding protein domain FY132_19205 PF00005 ABC transporter FY132_19210 PF02653 Branched-chain amino acid transport system / permease component FY132_19220 PF08450 SMP-30/Gluconolactonase/LRE-like region FY132_19225 PF02631 RecX family FY132_19230 PF00034 Cytochrome c FY132_19240 PF00005 ABC transporter FY132_19245 PF01032 FecCD transport family FY132_19255 PF07715 TonB-dependent Receptor Plug Domain FY132_19255 PF00593 TonB dependent receptor FY132_19260 PF03466 LysR substrate binding domain FY132_19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_19270 PF00884 Sulfatase FY132_19270 PF08019 Phosphoethanolamine transferase EptA/EptB FY132_19275 PF00486 Transcriptional regulatory protein, C terminal FY132_19275 PF00072 Response regulator receiver domain FY132_19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_19280 PF00512 His Kinase A (phospho-acceptor) domain FY132_19285 PF00083 Sugar (and other) transporter FY132_19290 PF11972 HTH DNA binding domain FY132_19290 PF07756 Protein of unknown function (DUF1612) FY132_19300 PF00672 HAMP domain FY132_19300 PF00211 Adenylate and Guanylate cyclase catalytic domain FY132_19310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_19310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_19315 PF00892 EamA-like transporter family FY132_19320 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY132_19325 PF00491 Arginase family FY132_19340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY132_19340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY132_19345 PF00202 Aminotransferase class-III FY132_19355 PF00155 Aminotransferase class I and II FY132_19360 PF06968 Biotin and Thiamin Synthesis associated domain FY132_19360 PF04055 Radical SAM superfamily FY132_19365 PF13673 Acetyltransferase (GNAT) domain FY132_19410 PF01569 PAP2 superfamily FY132_19415 PF00072 Response regulator receiver domain FY132_19415 PF00486 Transcriptional regulatory protein, C terminal FY132_19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_19420 PF00672 HAMP domain FY132_19420 PF00512 His Kinase A (phospho-acceptor) domain FY132_19430 PF07690 Major Facilitator Superfamily FY132_19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_19435 PF03466 LysR substrate binding domain FY132_19455 PF07969 Amidohydrolase family FY132_19470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_19475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_19475 PF03466 LysR substrate binding domain FY132_19480 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY132_19490 PF07690 Major Facilitator Superfamily FY132_19495 PF03466 LysR substrate binding domain FY132_19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_19505 PF00535 Glycosyl transferase family 2 FY132_19515 PF03275 UDP-galactopyranose mutase FY132_19525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_19525 PF00672 HAMP domain FY132_19540 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19545 PF00005 ABC transporter FY132_19555 PF04303 PrpF protein FY132_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_19560 PF03466 LysR substrate binding domain FY132_19565 PF01047 MarR family FY132_19595 PF00440 Bacterial regulatory proteins, tetR family FY132_19600 PF12833 Helix-turn-helix domain FY132_19600 PF02311 AraC-like ligand binding domain FY132_19615 PF13533 Biotin-lipoyl like FY132_19630 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19635 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_19645 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19650 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19650 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_19655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_19655 PF00005 ABC transporter FY132_19695 PF01979 Amidohydrolase family FY132_19700 PF01979 Amidohydrolase family FY132_19705 PF00221 Aromatic amino acid lyase FY132_19715 PF01175 Urocanase Rossmann-like domain FY132_19715 PF17392 Urocanase C-terminal domain FY132_19715 PF17391 Urocanase N-terminal domain FY132_19720 PF05962 HutD FY132_19725 PF07364 Metallopeptidase family M81 FY132_19725 PF07171 MlrC C-terminus FY132_19730 PF01168 Alanine racemase, N-terminal domain FY132_19730 PF14031 Putative serine dehydratase domain FY132_19735 PF01042 Endoribonuclease L-PSP FY132_19745 PF13614 AAA domain FY132_19750 PF02195 ParB-like nuclease domain FY132_19750 PF07506 RepB plasmid partitioning protein FY132_19755 PF03428 Replication protein C N-terminal domain FY132_19755 PF11800 Replication protein C C-terminal region FY132_19770 PF06772 Bacterial low temperature requirement A protein (LtrA) FY132_19775 PF00591 Glycosyl transferase family, a/b domain FY132_19775 PF02885 Glycosyl transferase family, helical bundle domain FY132_19780 PF07715 TonB-dependent Receptor Plug Domain FY132_19780 PF00593 TonB dependent receptor FY132_19785 PF09278 MerR, DNA binding FY132_19785 PF00376 MerR family regulatory protein FY132_19790 PF00128 Alpha amylase, catalytic domain FY132_19790 PF02806 Alpha amylase, C-terminal all-beta domain FY132_19795 PF02785 Biotin carboxylase C-terminal domain FY132_19795 PF00289 Biotin carboxylase, N-terminal domain FY132_19795 PF00364 Biotin-requiring enzyme FY132_19795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_19800 PF02682 Carboxyltransferase domain, subdomain C and D FY132_19805 PF07286 Protein of unknown function (DUF1445) FY132_19810 PF03746 LamB/YcsF family FY132_19815 PF01566 Natural resistance-associated macrophage protein FY132_19820 PF07729 FCD domain FY132_19820 PF00392 Bacterial regulatory proteins, gntR family FY132_19825 PF03861 ANTAR domain FY132_19825 PF08376 Nitrate and nitrite sensing FY132_19840 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19845 PF00005 ABC transporter FY132_19850 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_19850 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY132_19850 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY132_19850 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY132_19850 PF04324 BFD-like [2Fe-2S] binding domain FY132_19860 PF04324 BFD-like [2Fe-2S] binding domain FY132_19860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY132_19860 PF00384 Molybdopterin oxidoreductase FY132_19860 PF01568 Molydopterin dinucleotide binding domain FY132_19865 PF10414 Sirohaem synthase dimerisation region FY132_19865 PF14824 Sirohaem biosynthesis protein central FY132_19865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY132_19870 PF08220 DeoR-like helix-turn-helix domain FY132_19870 PF00455 DeoR C terminal sensor domain FY132_19875 PF01266 FAD dependent oxidoreductase FY132_19875 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY132_19880 PF00005 ABC transporter FY132_19880 PF17912 MalK OB fold domain FY132_19885 PF17912 MalK OB fold domain FY132_19885 PF00005 ABC transporter FY132_19890 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19895 PF00528 Binding-protein-dependent transport system inner membrane component FY132_19910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_19910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_19915 PF03466 LysR substrate binding domain FY132_19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_19920 PF13593 SBF-like CPA transporter family (DUF4137) FY132_19925 PF00011 Hsp20/alpha crystallin family FY132_19940 PF00459 Inositol monophosphatase family FY132_19950 PF00072 Response regulator receiver domain FY132_19970 PF13407 Periplasmic binding protein domain FY132_19975 PF00005 ABC transporter FY132_19980 PF02653 Branched-chain amino acid transport system / permease component FY132_19990 PF00248 Aldo/keto reductase family FY132_19995 PF01266 FAD dependent oxidoreductase FY132_19995 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY132_20000 PF01791 DeoC/LacD family aldolase FY132_20005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY132_20005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY132_20010 PF00672 HAMP domain FY132_20010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_20015 PF03466 LysR substrate binding domain FY132_20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_20020 PF00300 Histidine phosphatase superfamily (branch 1) FY132_20020 PF00106 short chain dehydrogenase FY132_20025 PF00155 Aminotransferase class I and II FY132_20030 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20035 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20045 PF00005 ABC transporter FY132_20045 PF08402 TOBE domain FY132_20050 PF03746 LamB/YcsF family FY132_20055 PF02626 Carboxyltransferase domain, subdomain A and B FY132_20060 PF02682 Carboxyltransferase domain, subdomain C and D FY132_20070 PF02785 Biotin carboxylase C-terminal domain FY132_20070 PF00289 Biotin carboxylase, N-terminal domain FY132_20070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_20075 PF00364 Biotin-requiring enzyme FY132_20080 PF00892 EamA-like transporter family FY132_20085 PF00892 EamA-like transporter family FY132_20090 PF03466 LysR substrate binding domain FY132_20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_20095 PF03401 Tripartite tricarboxylate transporter family receptor FY132_20100 PF03737 Aldolase/RraA FY132_20110 PF01970 Tripartite tricarboxylate transporter TctA family FY132_20115 PF01370 NAD dependent epimerase/dehydratase family FY132_20125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_20125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_20130 PF00106 short chain dehydrogenase FY132_20135 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20140 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20145 PF00005 ABC transporter FY132_20150 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_20155 PF03737 Aldolase/RraA FY132_20160 PF08240 Alcohol dehydrogenase GroES-like domain FY132_20160 PF00107 Zinc-binding dehydrogenase FY132_20175 PF01070 FMN-dependent dehydrogenase FY132_20180 PF00132 Bacterial transferase hexapeptide (six repeats) FY132_20180 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY132_20180 PF14602 Hexapeptide repeat of succinyl-transferase FY132_20190 PF01547 Bacterial extracellular solute-binding protein FY132_20200 PF17912 MalK OB fold domain FY132_20200 PF00005 ABC transporter FY132_20200 PF03459 TOBE domain FY132_20205 PF07470 Glycosyl Hydrolase Family 88 FY132_20210 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20215 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20230 PF07729 FCD domain FY132_20230 PF00392 Bacterial regulatory proteins, gntR family FY132_20235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_20235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_20240 PF12848 ABC transporter FY132_20240 PF00005 ABC transporter FY132_20250 PF08379 Bacterial transglutaminase-like N-terminal region FY132_20250 PF01841 Transglutaminase-like superfamily FY132_20255 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY132_20255 PF14403 Circularly permuted ATP-grasp type 2 FY132_20275 PF03061 Thioesterase superfamily FY132_20290 PF00392 Bacterial regulatory proteins, gntR family FY132_20290 PF07729 FCD domain FY132_20295 PF00465 Iron-containing alcohol dehydrogenase FY132_20300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY132_20315 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20320 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20320 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_20325 PF00005 ABC transporter FY132_20325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_20330 PF00701 Dihydrodipicolinate synthetase family FY132_20365 PF00145 C-5 cytosine-specific DNA methylase FY132_20375 PF02796 Helix-turn-helix domain of resolvase FY132_20375 PF00239 Resolvase, N terminal domain FY132_20395 PF01261 Xylose isomerase-like TIM barrel FY132_20400 PF01261 Xylose isomerase-like TIM barrel FY132_20405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_20405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_20410 PF01261 Xylose isomerase-like TIM barrel FY132_20415 PF00005 ABC transporter FY132_20420 PF02653 Branched-chain amino acid transport system / permease component FY132_20430 PF00356 Bacterial regulatory proteins, lacI family FY132_20435 PF00221 Aromatic amino acid lyase FY132_20440 PF00005 ABC transporter FY132_20440 PF00571 CBS domain FY132_20445 PF00528 Binding-protein-dependent transport system inner membrane component FY132_20460 PF00392 Bacterial regulatory proteins, gntR family FY132_20460 PF07702 UTRA domain FY132_20470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_20470 PF00529 HlyD membrane-fusion protein of T1SS FY132_20480 PF00873 AcrB/AcrD/AcrF family FY132_20485 PF00392 Bacterial regulatory proteins, gntR family FY132_20485 PF07729 FCD domain FY132_20490 PF10415 Fumarase C C-terminus FY132_20490 PF00206 Lyase FY132_20495 PF00324 Amino acid permease FY132_20500 PF00710 Asparaginase, N-terminal FY132_20500 PF17763 Glutaminase/Asparaginase C-terminal domain FY132_20510 PF03814 Potassium-transporting ATPase A subunit FY132_20520 PF02669 K+-transporting ATPase, c chain FY132_20525 PF02702 Osmosensitive K+ channel His kinase sensor domain FY132_20525 PF00512 His Kinase A (phospho-acceptor) domain FY132_20525 PF13492 GAF domain FY132_20525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_20525 PF13493 Domain of unknown function (DUF4118) FY132_20530 PF00072 Response regulator receiver domain FY132_20530 PF00486 Transcriptional regulatory protein, C terminal FY132_20535 PF01212 Beta-eliminating lyase FY132_20540 PF01645 Conserved region in glutamate synthase FY132_20540 PF04898 Glutamate synthase central domain FY132_20540 PF01493 GXGXG motif FY132_20540 PF00310 Glutamine amidotransferases class-II FY132_20550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY132_20550 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_20555 PF00672 HAMP domain FY132_20555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_20555 PF00512 His Kinase A (phospho-acceptor) domain FY132_20560 PF00072 Response regulator receiver domain FY132_20560 PF00486 Transcriptional regulatory protein, C terminal FY132_20570 PF13406 Transglycosylase SLT domain FY132_20575 PF00483 Nucleotidyl transferase FY132_20590 PF00571 CBS domain FY132_20590 PF01380 SIS domain FY132_20600 PF16200 C-terminal region of band_7 FY132_20600 PF01145 SPFH domain / Band 7 family FY132_20605 PF00762 Ferrochelatase FY132_20610 PF00149 Calcineurin-like phosphoesterase FY132_20610 PF02872 5'-nucleotidase, C-terminal domain FY132_20620 PF03435 Saccharopine dehydrogenase NADP binding domain FY132_20620 PF16653 Saccharopine dehydrogenase C-terminal domain FY132_20625 PF00990 Diguanylate cyclase, GGDEF domain FY132_20630 PF01063 Amino-transferase class IV FY132_20635 PF01432 Peptidase family M3 FY132_20635 PF08439 Oligopeptidase F FY132_20640 PF02954 Bacterial regulatory protein, Fis family FY132_20640 PF00072 Response regulator receiver domain FY132_20640 PF00158 Sigma-54 interaction domain FY132_20645 PF05951 Bacterial protein of unknown function (DUF882) FY132_20650 PF00224 Pyruvate kinase, barrel domain FY132_20650 PF02887 Pyruvate kinase, alpha/beta domain FY132_20670 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY132_20680 PF00444 Ribosomal protein L36 FY132_20685 PF02222 ATP-grasp domain FY132_20685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY132_20690 PF00731 AIR carboxylase FY132_20720 PF00459 Inositol monophosphatase family FY132_20730 PF00691 OmpA family FY132_20730 PF01389 OmpA-like transmembrane domain FY132_20735 PF00890 FAD binding domain FY132_20740 PF00664 ABC transporter transmembrane region FY132_20740 PF00005 ABC transporter FY132_20745 PF01197 Ribosomal protein L31 FY132_20765 PF00274 Fructose-bisphosphate aldolase class-I FY132_20770 PF00162 Phosphoglycerate kinase FY132_20775 PF03471 Transporter associated domain FY132_20775 PF00999 Sodium/hydrogen exchanger family FY132_20785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY132_20785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY132_20790 PF00456 Transketolase, thiamine diphosphate binding domain FY132_20790 PF02780 Transketolase, C-terminal domain FY132_20790 PF02779 Transketolase, pyrimidine binding domain FY132_20810 PF00571 CBS domain FY132_20810 PF03471 Transporter associated domain FY132_20810 PF01595 Cyclin M transmembrane N-terminal domain FY132_20820 PF13277 YmdB-like protein FY132_20835 PF01709 Transcriptional regulator FY132_20840 PF00296 Luciferase-like monooxygenase FY132_20845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_20845 PF00672 HAMP domain FY132_20850 PF02075 Crossover junction endodeoxyribonuclease RuvC FY132_20855 PF07499 RuvA, C-terminal domain FY132_20855 PF01330 RuvA N terminal domain FY132_20860 PF05491 RuvB C-terminal winged helix domain FY132_20860 PF17864 RuvB AAA lid domain FY132_20860 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY132_20875 PF00293 NUDIX domain FY132_20880 PF00293 NUDIX domain FY132_20885 PF03061 Thioesterase superfamily FY132_20890 PF01618 MotA/TolQ/ExbB proton channel family FY132_20895 PF02472 Biopolymer transport protein ExbD/TolR FY132_20905 PF07676 WD40-like Beta Propeller Repeat FY132_20905 PF04052 TolB amino-terminal domain FY132_20910 PF00691 OmpA family FY132_20920 PF01171 PP-loop family FY132_20925 PF01434 Peptidase family M41 FY132_20925 PF06480 FtsH Extracellular FY132_20925 PF17862 AAA+ lid domain FY132_20925 PF00004 ATPase family associated with various cellular activities (AAA) FY132_20930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY132_20930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY132_20930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY132_20930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY132_20935 PF13505 Outer membrane protein beta-barrel domain FY132_20945 PF01842 ACT domain FY132_20945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_20945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_20980 PF00085 Thioredoxin FY132_20990 PF03966 Trm112p-like protein FY132_20995 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY132_20995 PF17962 Bacterial macroglobulin domain 6 FY132_20995 PF01835 MG2 domain FY132_20995 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY132_20995 PF07678 A-macroglobulin TED domain FY132_20995 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY132_20995 PF07703 Alpha-2-macroglobulin bait region domain FY132_20995 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY132_20995 PF00207 Alpha-2-macroglobulin family FY132_21000 PF06832 Penicillin-Binding Protein C-terminus Family FY132_21000 PF00912 Transglycosylase FY132_21000 PF00905 Penicillin binding protein transpeptidase domain FY132_21010 PF01546 Peptidase family M20/M25/M40 FY132_21010 PF07687 Peptidase dimerisation domain FY132_21015 PF00768 D-alanyl-D-alanine carboxypeptidase FY132_21015 PF07943 Penicillin-binding protein 5, C-terminal domain FY132_21020 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY132_21020 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY132_21025 PF00581 Rhodanese-like domain FY132_21025 PF01206 Sulfurtransferase TusA FY132_21030 PF03734 L,D-transpeptidase catalytic domain FY132_21035 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY132_21040 PF00589 Phage integrase family FY132_21040 PF02899 Phage integrase, N-terminal SAM-like domain FY132_21050 PF01202 Shikimate kinase FY132_21055 PF01761 3-dehydroquinate synthase FY132_21065 PF01722 BolA-like protein FY132_21070 PF00226 DnaJ domain FY132_21075 PF12556 Cobaltochelatase CobS subunit N terminal FY132_21075 PF08406 CbbQ/NirQ/NorQ C-terminal FY132_21075 PF07728 AAA domain (dynein-related subfamily) FY132_21080 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY132_21080 PF06213 Cobalamin biosynthesis protein CobT FY132_21095 PF02592 Putative vitamin uptake transporter FY132_21100 PF00830 Ribosomal L28 family FY132_21120 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY132_21120 PF00753 Metallo-beta-lactamase superfamily FY132_21125 PF01209 ubiE/COQ5 methyltransferase family FY132_21130 PF00155 Aminotransferase class I and II FY132_21135 PF02153 Prephenate dehydrogenase FY132_21145 PF04752 ChaC-like protein FY132_21165 PF00005 ABC transporter FY132_21175 PF00156 Phosphoribosyl transferase domain FY132_21180 PF00072 Response regulator receiver domain FY132_21190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY132_21190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY132_21200 PF00206 Lyase FY132_21200 PF14698 Argininosuccinate lyase C-terminal FY132_21205 PF08534 Redoxin FY132_21215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY132_21215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY132_21220 PF01012 Electron transfer flavoprotein domain FY132_21220 PF00766 Electron transfer flavoprotein FAD-binding domain FY132_21225 PF01012 Electron transfer flavoprotein domain FY132_21235 PF01923 Cobalamin adenosyltransferase FY132_21245 PF00106 short chain dehydrogenase FY132_21255 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY132_21260 PF12833 Helix-turn-helix domain FY132_21260 PF00730 HhH-GPD superfamily base excision DNA repair protein FY132_21260 PF06029 AlkA N-terminal domain FY132_21260 PF02805 Metal binding domain of Ada FY132_21265 PF09856 Predicted transcriptional regulator (DUF2083) FY132_21265 PF06114 IrrE N-terminal-like domain FY132_21265 PF01381 Helix-turn-helix FY132_21270 PF01039 Carboxyl transferase domain FY132_21275 PF02798 Glutathione S-transferase, N-terminal domain FY132_21290 PF02785 Biotin carboxylase C-terminal domain FY132_21290 PF00289 Biotin carboxylase, N-terminal domain FY132_21290 PF18140 Propionyl-coenzyme A carboxylase BT domain FY132_21290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_21290 PF00364 Biotin-requiring enzyme FY132_21295 PF02310 B12 binding domain FY132_21295 PF01642 Methylmalonyl-CoA mutase FY132_21305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY132_21305 PF01266 FAD dependent oxidoreductase FY132_21315 PF13407 Periplasmic binding protein domain FY132_21320 PF02653 Branched-chain amino acid transport system / permease component FY132_21325 PF00005 ABC transporter FY132_21330 PF01717 Cobalamin-independent synthase, Catalytic domain FY132_21330 PF08267 Cobalamin-independent synthase, N-terminal domain FY132_21340 PF01381 Helix-turn-helix FY132_21355 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY132_21380 PF01047 MarR family FY132_21380 PF00480 ROK family FY132_21390 PF00528 Binding-protein-dependent transport system inner membrane component FY132_21395 PF00528 Binding-protein-dependent transport system inner membrane component FY132_21400 PF17912 MalK OB fold domain FY132_21400 PF00005 ABC transporter FY132_21400 PF03459 TOBE domain FY132_21405 PF03009 Glycerophosphoryl diester phosphodiesterase family FY132_21415 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY132_21415 PF00722 Glycosyl hydrolases family 16 FY132_21420 PF03449 Transcription elongation factor, N-terminal FY132_21420 PF01272 Transcription elongation factor, GreA/GreB, C-term FY132_21435 PF13439 Glycosyltransferase Family 4 FY132_21435 PF00534 Glycosyl transferases group 1 FY132_21440 PF13439 Glycosyltransferase Family 4 FY132_21440 PF00534 Glycosyl transferases group 1 FY132_21460 PF13807 G-rich domain on putative tyrosine kinase FY132_21460 PF02706 Chain length determinant protein FY132_21460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY132_21470 PF01757 Acyltransferase family FY132_21485 PF01943 Polysaccharide biosynthesis protein FY132_21545 PF01757 Acyltransferase family FY132_21550 PF00892 EamA-like transporter family FY132_21555 PF02810 SEC-C motif FY132_21555 PF01043 SecA preprotein cross-linking domain FY132_21555 PF07516 SecA Wing and Scaffold domain FY132_21555 PF07517 SecA DEAD-like domain FY132_21565 PF01960 ArgJ family FY132_21570 PF13508 Acetyltransferase (GNAT) domain FY132_21570 PF00583 Acetyltransferase (GNAT) family FY132_21575 PF00293 NUDIX domain FY132_21590 PF08241 Methyltransferase domain FY132_21600 PF00462 Glutaredoxin FY132_21605 PF00795 Carbon-nitrogen hydrolase FY132_21615 PF08241 Methyltransferase domain FY132_21630 PF00378 Enoyl-CoA hydratase/isomerase FY132_21640 PF00528 Binding-protein-dependent transport system inner membrane component FY132_21645 PF00528 Binding-protein-dependent transport system inner membrane component FY132_21650 PF00005 ABC transporter FY132_21655 PF08713 DNA alkylation repair enzyme FY132_21660 PF00171 Aldehyde dehydrogenase family FY132_21670 PF00563 EAL domain FY132_21670 PF00990 Diguanylate cyclase, GGDEF domain FY132_21670 PF08447 PAS fold FY132_21670 PF08448 PAS fold FY132_21680 PF00561 alpha/beta hydrolase fold FY132_21690 PF05336 L-rhamnose mutarotase FY132_21695 PF02653 Branched-chain amino acid transport system / permease component FY132_21700 PF02653 Branched-chain amino acid transport system / permease component FY132_21705 PF00005 ABC transporter FY132_21710 PF13407 Periplasmic binding protein domain FY132_21715 PF08220 DeoR-like helix-turn-helix domain FY132_21715 PF00455 DeoR C terminal sensor domain FY132_21720 PF00596 Class II Aldolase and Adducin N-terminal domain FY132_21725 PF01261 Xylose isomerase-like TIM barrel FY132_21730 PF02548 Ketopantoate hydroxymethyltransferase FY132_21735 PF02569 Pantoate-beta-alanine ligase FY132_21745 PF00682 HMGL-like FY132_21750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_21750 PF02785 Biotin carboxylase C-terminal domain FY132_21750 PF00289 Biotin carboxylase, N-terminal domain FY132_21750 PF00364 Biotin-requiring enzyme FY132_21755 PF01039 Carboxyl transferase domain FY132_21760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_21760 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_21760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_21765 PF01037 Lrp/AsnC ligand binding domain FY132_21770 PF00108 Thiolase, N-terminal domain FY132_21770 PF02803 Thiolase, C-terminal domain FY132_21775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_21775 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_21775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_21780 PF00676 Dehydrogenase E1 component FY132_21780 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY132_21785 PF02779 Transketolase, pyrimidine binding domain FY132_21785 PF02780 Transketolase, C-terminal domain FY132_21790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY132_21790 PF00364 Biotin-requiring enzyme FY132_21790 PF02817 e3 binding domain FY132_21795 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY132_21795 PF01676 Metalloenzyme superfamily FY132_21805 PF04143 Sulphur transport FY132_21815 PF04273 Putative phosphatase (DUF442) FY132_21815 PF00753 Metallo-beta-lactamase superfamily FY132_21825 PF00106 short chain dehydrogenase FY132_21830 PF00561 alpha/beta hydrolase fold FY132_21840 PF07729 FCD domain FY132_21840 PF00392 Bacterial regulatory proteins, gntR family FY132_21850 PF00528 Binding-protein-dependent transport system inner membrane component FY132_21855 PF00528 Binding-protein-dependent transport system inner membrane component FY132_21855 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_21860 PF00005 ABC transporter FY132_21860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_21865 PF00005 ABC transporter FY132_21865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_21995 PF04233 Phage Mu protein F like protein FY132_22000 PF06074 Protein of unknown function (DUF935) FY132_22005 PF03237 Terminase-like family FY132_22125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22135 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_22135 PF13378 Enolase C-terminal domain-like FY132_22140 PF00106 short chain dehydrogenase FY132_22145 PF01638 HxlR-like helix-turn-helix FY132_22155 PF00296 Luciferase-like monooxygenase FY132_22160 PF00296 Luciferase-like monooxygenase FY132_22170 PF05368 NmrA-like family FY132_22175 PF00296 Luciferase-like monooxygenase FY132_22180 PF07687 Peptidase dimerisation domain FY132_22180 PF01546 Peptidase family M20/M25/M40 FY132_22185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22205 PF00296 Luciferase-like monooxygenase FY132_22210 PF03466 LysR substrate binding domain FY132_22210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_22220 PF00248 Aldo/keto reductase family FY132_22225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_22225 PF00005 ABC transporter FY132_22230 PF00005 ABC transporter FY132_22230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_22235 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22240 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_22255 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_22255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_22260 PF00296 Luciferase-like monooxygenase FY132_22270 PF00581 Rhodanese-like domain FY132_22285 PF00296 Luciferase-like monooxygenase FY132_22290 PF01613 Flavin reductase like domain FY132_22300 PF02082 Transcriptional regulator FY132_22305 PF00296 Luciferase-like monooxygenase FY132_22310 PF00296 Luciferase-like monooxygenase FY132_22315 PF01546 Peptidase family M20/M25/M40 FY132_22315 PF07687 Peptidase dimerisation domain FY132_22325 PF00005 ABC transporter FY132_22330 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_22340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_22340 PF03466 LysR substrate binding domain FY132_22350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_22350 PF04324 BFD-like [2Fe-2S] binding domain FY132_22355 PF01266 FAD dependent oxidoreductase FY132_22360 PF01266 FAD dependent oxidoreductase FY132_22365 PF01037 Lrp/AsnC ligand binding domain FY132_22370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_22370 PF00005 ABC transporter FY132_22375 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22375 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_22380 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22395 PF00202 Aminotransferase class-III FY132_22410 PF01266 FAD dependent oxidoreductase FY132_22415 PF00171 Aldehyde dehydrogenase family FY132_22420 PF00180 Isocitrate/isopropylmalate dehydrogenase FY132_22425 PF00171 Aldehyde dehydrogenase family FY132_22435 PF05378 Hydantoinase/oxoprolinase N-terminal region FY132_22435 PF01968 Hydantoinase/oxoprolinase FY132_22450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_22455 PF07687 Peptidase dimerisation domain FY132_22455 PF01546 Peptidase family M20/M25/M40 FY132_22470 PF01032 FecCD transport family FY132_22475 PF00005 ABC transporter FY132_22480 PF00127 Copper binding proteins, plastocyanin/azurin family FY132_22485 PF01209 ubiE/COQ5 methyltransferase family FY132_22500 PF01032 FecCD transport family FY132_22505 PF00005 ABC transporter FY132_22510 PF08281 Sigma-70, region 4 FY132_22510 PF12680 SnoaL-like domain FY132_22510 PF04542 Sigma-70 region 2 FY132_22530 PF00005 ABC transporter FY132_22530 PF00664 ABC transporter transmembrane region FY132_22535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_22535 PF00529 HlyD membrane-fusion protein of T1SS FY132_22545 PF00392 Bacterial regulatory proteins, gntR family FY132_22545 PF07729 FCD domain FY132_22550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_22550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_22555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_22555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_22560 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_22560 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_22570 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22575 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22580 PF17912 MalK OB fold domain FY132_22580 PF00005 ABC transporter FY132_22580 PF03459 TOBE domain FY132_22585 PF00920 Dehydratase family FY132_22590 PF01370 NAD dependent epimerase/dehydratase family FY132_22595 PF03737 Aldolase/RraA FY132_22600 PF00072 Response regulator receiver domain FY132_22600 PF00196 Bacterial regulatory proteins, luxR family FY132_22605 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22610 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_22610 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_22615 PF00005 ABC transporter FY132_22630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22645 PF01112 Asparaginase FY132_22650 PF03466 LysR substrate binding domain FY132_22650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_22655 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22660 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_22660 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22665 PF00005 ABC transporter FY132_22665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_22675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_22680 PF01546 Peptidase family M20/M25/M40 FY132_22690 PF13407 Periplasmic binding protein domain FY132_22695 PF00005 ABC transporter FY132_22700 PF02653 Branched-chain amino acid transport system / permease component FY132_22705 PF07722 Peptidase C26 FY132_22710 PF03480 Bacterial extracellular solute-binding protein, family 7 FY132_22715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY132_22720 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY132_22735 PF01266 FAD dependent oxidoreductase FY132_22740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_22740 PF08447 PAS fold FY132_22740 PF13426 PAS domain FY132_22745 PF00296 Luciferase-like monooxygenase FY132_22750 PF03972 MmgE/PrpD family FY132_22755 PF00005 ABC transporter FY132_22760 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22765 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22770 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_22775 PF00390 Malic enzyme, N-terminal domain FY132_22775 PF03949 Malic enzyme, NAD binding domain FY132_22775 PF01515 Phosphate acetyl/butaryl transferase FY132_22780 PF03466 LysR substrate binding domain FY132_22780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_22785 PF01011 PQQ enzyme repeat FY132_22790 PF00483 Nucleotidyl transferase FY132_22790 PF01050 Mannose-6-phosphate isomerase FY132_22800 PF01547 Bacterial extracellular solute-binding protein FY132_22805 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22810 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22815 PF00005 ABC transporter FY132_22815 PF17912 MalK OB fold domain FY132_22825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_22825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_22830 PF06508 Queuosine biosynthesis protein QueC FY132_22835 PF01242 6-pyruvoyl tetrahydropterin synthase FY132_22840 PF04055 Radical SAM superfamily FY132_22845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_22845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_22855 PF03459 TOBE domain FY132_22855 PF17912 MalK OB fold domain FY132_22855 PF00005 ABC transporter FY132_22860 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22865 PF00528 Binding-protein-dependent transport system inner membrane component FY132_22870 PF01547 Bacterial extracellular solute-binding protein FY132_22875 PF00356 Bacterial regulatory proteins, lacI family FY132_22890 PF02245 Methylpurine-DNA glycosylase (MPG) FY132_22910 PF03734 L,D-transpeptidase catalytic domain FY132_22910 PF17969 L,D-transpeptidase C-terminal domain FY132_22915 PF00672 HAMP domain FY132_22915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_22920 PF00202 Aminotransferase class-III FY132_22930 PF02397 Bacterial sugar transferase FY132_22935 PF02563 Polysaccharide biosynthesis/export protein FY132_22950 PF00529 HlyD membrane-fusion protein of T1SS FY132_22955 PF00005 ABC transporter FY132_22955 PF00664 ABC transporter transmembrane region FY132_22970 PF00196 Bacterial regulatory proteins, luxR family FY132_22970 PF00072 Response regulator receiver domain FY132_22980 PF01370 NAD dependent epimerase/dehydratase family FY132_22985 PF16363 GDP-mannose 4,6 dehydratase FY132_23015 PF07238 PilZ domain FY132_23015 PF00535 Glycosyl transferase family 2 FY132_23015 PF03552 Cellulose synthase FY132_23025 PF01270 Glycosyl hydrolases family 8 FY132_23035 PF07687 Peptidase dimerisation domain FY132_23035 PF01546 Peptidase family M20/M25/M40 FY132_23050 PF00202 Aminotransferase class-III FY132_23055 PF00375 Sodium:dicarboxylate symporter family FY132_23060 PF00512 His Kinase A (phospho-acceptor) domain FY132_23060 PF02743 Cache domain FY132_23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_23065 PF00158 Sigma-54 interaction domain FY132_23065 PF00072 Response regulator receiver domain FY132_23065 PF02954 Bacterial regulatory protein, Fis family FY132_23080 PF01266 FAD dependent oxidoreductase FY132_23085 PF01168 Alanine racemase, N-terminal domain FY132_23085 PF00842 Alanine racemase, C-terminal domain FY132_23090 PF01037 Lrp/AsnC ligand binding domain FY132_23095 PF08543 Phosphomethylpyrimidine kinase FY132_23100 PF02581 Thiamine monophosphate synthase FY132_23105 PF02110 Hydroxyethylthiazole kinase family FY132_23110 PF09084 NMT1/THI5 like FY132_23115 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23125 PF01055 Glycosyl hydrolases family 31 FY132_23130 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23135 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23140 PF01547 Bacterial extracellular solute-binding protein FY132_23145 PF00005 ABC transporter FY132_23145 PF08402 TOBE domain FY132_23150 PF00392 Bacterial regulatory proteins, gntR family FY132_23150 PF07702 UTRA domain FY132_23155 PF00296 Luciferase-like monooxygenase FY132_23160 PF00248 Aldo/keto reductase family FY132_23165 PF01613 Flavin reductase like domain FY132_23180 PF00873 AcrB/AcrD/AcrF family FY132_23185 PF13533 Biotin-lipoyl like FY132_23190 PF02563 Polysaccharide biosynthesis/export protein FY132_23195 PF13439 Glycosyltransferase Family 4 FY132_23195 PF00534 Glycosyl transferases group 1 FY132_23200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_23205 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23210 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23210 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_23215 PF01979 Amidohydrolase family FY132_23230 PF03841 L-seryl-tRNA selenium transferase FY132_23235 PF00005 ABC transporter FY132_23235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_23240 PF02798 Glutathione S-transferase, N-terminal domain FY132_23240 PF00043 Glutathione S-transferase, C-terminal domain FY132_23255 PF00296 Luciferase-like monooxygenase FY132_23260 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY132_23260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY132_23265 PF03480 Bacterial extracellular solute-binding protein, family 7 FY132_23275 PF00171 Aldehyde dehydrogenase family FY132_23285 PF03786 D-mannonate dehydratase (UxuA) FY132_23290 PF00107 Zinc-binding dehydrogenase FY132_23290 PF08240 Alcohol dehydrogenase GroES-like domain FY132_23295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY132_23305 PF03480 Bacterial extracellular solute-binding protein, family 7 FY132_23310 PF07729 FCD domain FY132_23310 PF00392 Bacterial regulatory proteins, gntR family FY132_23315 PF13419 Haloacid dehalogenase-like hydrolase FY132_23320 PF05209 Septum formation inhibitor MinC, N-terminal domain FY132_23320 PF03775 Septum formation inhibitor MinC, C-terminal domain FY132_23325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY132_23330 PF03776 Septum formation topological specificity factor MinE FY132_23335 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_23345 PF08447 PAS fold FY132_23345 PF08448 PAS fold FY132_23345 PF00563 EAL domain FY132_23345 PF00990 Diguanylate cyclase, GGDEF domain FY132_23350 PF01425 Amidase FY132_23360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_23370 PF01547 Bacterial extracellular solute-binding protein FY132_23375 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23380 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23385 PF03459 TOBE domain FY132_23385 PF00005 ABC transporter FY132_23385 PF17912 MalK OB fold domain FY132_23395 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_23395 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_23405 PF13660 Domain of unknown function (DUF4147) FY132_23405 PF05161 MOFRL family FY132_23425 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY132_23425 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY132_23425 PF14579 Helix-hairpin-helix motif FY132_23425 PF02811 PHP domain FY132_23425 PF01336 OB-fold nucleic acid binding domain FY132_23430 PF13847 Methyltransferase domain FY132_23440 PF07690 Major Facilitator Superfamily FY132_23445 PF07729 FCD domain FY132_23445 PF00392 Bacterial regulatory proteins, gntR family FY132_23450 PF02653 Branched-chain amino acid transport system / permease component FY132_23455 PF02653 Branched-chain amino acid transport system / permease component FY132_23460 PF00005 ABC transporter FY132_23465 PF13407 Periplasmic binding protein domain FY132_23470 PF00920 Dehydratase family FY132_23480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_23485 PF12833 Helix-turn-helix domain FY132_23495 PF00266 Aminotransferase class-V FY132_23500 PF00005 ABC transporter FY132_23500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_23505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_23505 PF00005 ABC transporter FY132_23510 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23515 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_23525 PF09397 Ftsk gamma domain FY132_23525 PF01580 FtsK/SpoIIIE family FY132_23525 PF17854 FtsK alpha domain FY132_23525 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY132_23530 PF02615 Malate/L-lactate dehydrogenase FY132_23535 PF00563 EAL domain FY132_23535 PF00990 Diguanylate cyclase, GGDEF domain FY132_23535 PF08447 PAS fold FY132_23535 PF08448 PAS fold FY132_23545 PF07883 Cupin domain FY132_23545 PF05899 Protein of unknown function (DUF861) FY132_23550 PF17151 Periplasmic sensor domain FY132_23550 PF00990 Diguanylate cyclase, GGDEF domain FY132_23555 PF00529 HlyD membrane-fusion protein of T1SS FY132_23555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_23560 PF00873 AcrB/AcrD/AcrF family FY132_23565 PF08361 MAATS-type transcriptional repressor, C-terminal region FY132_23565 PF00440 Bacterial regulatory proteins, tetR family FY132_23570 PF00005 ABC transporter FY132_23575 PF02653 Branched-chain amino acid transport system / permease component FY132_23580 PF13407 Periplasmic binding protein domain FY132_23585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_23585 PF03466 LysR substrate binding domain FY132_23590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY132_23590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY132_23610 PF03922 OmpW family FY132_23620 PF08402 TOBE domain FY132_23620 PF00005 ABC transporter FY132_23625 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23630 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23635 PF13416 Bacterial extracellular solute-binding protein FY132_23640 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY132_23640 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY132_23655 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY132_23655 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY132_23660 PF00005 ABC transporter FY132_23665 PF00950 ABC 3 transport family FY132_23670 PF01297 Zinc-uptake complex component A periplasmic FY132_23675 PF00583 Acetyltransferase (GNAT) family FY132_23690 PF01053 Cys/Met metabolism PLP-dependent enzyme FY132_23695 PF01547 Bacterial extracellular solute-binding protein FY132_23700 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23705 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23710 PF17912 MalK OB fold domain FY132_23710 PF00005 ABC transporter FY132_23715 PF08402 TOBE domain FY132_23715 PF00005 ABC transporter FY132_23720 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23725 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23730 PF08013 Tagatose 6 phosphate kinase FY132_23735 PF00294 pfkB family carbohydrate kinase FY132_23750 PF08240 Alcohol dehydrogenase GroES-like domain FY132_23750 PF16912 Glucose dehydrogenase C-terminus FY132_23755 PF00356 Bacterial regulatory proteins, lacI family FY132_23760 PF07690 Major Facilitator Superfamily FY132_23765 PF12833 Helix-turn-helix domain FY132_23765 PF02311 AraC-like ligand binding domain FY132_23780 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23785 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23790 PF00005 ABC transporter FY132_23790 PF17912 MalK OB fold domain FY132_23795 PF00248 Aldo/keto reductase family FY132_23810 PF00392 Bacterial regulatory proteins, gntR family FY132_23810 PF07729 FCD domain FY132_23815 PF01370 NAD dependent epimerase/dehydratase family FY132_23820 PF04962 KduI/IolB family FY132_23830 PF00701 Dihydrodipicolinate synthetase family FY132_23835 PF13378 Enolase C-terminal domain-like FY132_23835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_23840 PF04909 Amidohydrolase FY132_23845 PF12833 Helix-turn-helix domain FY132_23845 PF02311 AraC-like ligand binding domain FY132_23850 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23855 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23860 PF08402 TOBE domain FY132_23860 PF00005 ABC transporter FY132_23870 PF00295 Glycosyl hydrolases family 28 FY132_23875 PF07470 Glycosyl Hydrolase Family 88 FY132_23880 PF00550 Phosphopantetheine attachment site FY132_23900 PF01165 Ribosomal protein S21 FY132_23910 PF00313 'Cold-shock' DNA-binding domain FY132_23915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_23915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_23930 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_23930 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_23935 PF17938 Tetracyclin repressor-like, C-terminal domain FY132_23935 PF00440 Bacterial regulatory proteins, tetR family FY132_23940 PF13416 Bacterial extracellular solute-binding protein FY132_23945 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23950 PF00528 Binding-protein-dependent transport system inner membrane component FY132_23955 PF03459 TOBE domain FY132_23955 PF17912 MalK OB fold domain FY132_23955 PF00005 ABC transporter FY132_23960 PF01261 Xylose isomerase-like TIM barrel FY132_23965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_23965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_23965 PF01842 ACT domain FY132_23975 PF00356 Bacterial regulatory proteins, lacI family FY132_23990 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY132_23995 PF17912 MalK OB fold domain FY132_23995 PF00005 ABC transporter FY132_24005 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24010 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24015 PF00005 ABC transporter FY132_24020 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24025 PF09084 NMT1/THI5 like FY132_24030 PF00296 Luciferase-like monooxygenase FY132_24040 PF17912 MalK OB fold domain FY132_24040 PF00005 ABC transporter FY132_24045 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24050 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24055 PF13416 Bacterial extracellular solute-binding protein FY132_24065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_24065 PF08447 PAS fold FY132_24065 PF13426 PAS domain FY132_24090 PF08402 TOBE domain FY132_24090 PF00005 ABC transporter FY132_24100 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24105 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24110 PF01177 Asp/Glu/Hydantoin racemase FY132_24150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_24150 PF03466 LysR substrate binding domain FY132_24155 PF00144 Beta-lactamase FY132_24165 PF00860 Permease family FY132_24175 PF07690 Major Facilitator Superfamily FY132_24180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_24180 PF00512 His Kinase A (phospho-acceptor) domain FY132_24180 PF16736 Single Cache-like FY132_24180 PF00989 PAS fold FY132_24185 PF00072 Response regulator receiver domain FY132_24185 PF00486 Transcriptional regulatory protein, C terminal FY132_24190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_24190 PF00529 HlyD membrane-fusion protein of T1SS FY132_24195 PF00873 AcrB/AcrD/AcrF family FY132_24200 PF13460 NAD(P)H-binding FY132_24210 PF01494 FAD binding domain FY132_24215 PF02308 MgtC family FY132_24225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY132_24230 PF00873 AcrB/AcrD/AcrF family FY132_24235 PF13520 Amino acid permease FY132_24240 PF13520 Amino acid permease FY132_24255 PF01594 AI-2E family transporter FY132_24280 PF01037 Lrp/AsnC ligand binding domain FY132_24305 PF00501 AMP-binding enzyme FY132_24305 PF13193 AMP-binding enzyme C-terminal domain FY132_24315 PF09339 IclR helix-turn-helix domain FY132_24315 PF01614 Bacterial transcriptional regulator FY132_24325 PF03480 Bacterial extracellular solute-binding protein, family 7 FY132_24325 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY132_24330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY132_24335 PF04199 Putative cyclase FY132_24340 PF01494 FAD binding domain FY132_24355 PF00196 Bacterial regulatory proteins, luxR family FY132_24355 PF00072 Response regulator receiver domain FY132_24360 PF00196 Bacterial regulatory proteins, luxR family FY132_24360 PF00072 Response regulator receiver domain FY132_24365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_24365 PF00072 Response regulator receiver domain FY132_24365 PF08448 PAS fold FY132_24365 PF00512 His Kinase A (phospho-acceptor) domain FY132_24365 PF13426 PAS domain FY132_24370 PF00384 Molybdopterin oxidoreductase FY132_24375 PF00210 Ferritin-like domain FY132_24380 PF00561 alpha/beta hydrolase fold FY132_24390 PF06441 Epoxide hydrolase N terminus FY132_24395 PF00171 Aldehyde dehydrogenase family FY132_24400 PF02566 OsmC-like protein FY132_24405 PF00672 HAMP domain FY132_24405 PF00512 His Kinase A (phospho-acceptor) domain FY132_24405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_24410 PF00072 Response regulator receiver domain FY132_24410 PF00486 Transcriptional regulatory protein, C terminal FY132_24415 PF00561 alpha/beta hydrolase fold FY132_24425 PF02683 Cytochrome C biogenesis protein transmembrane region FY132_24425 PF17991 Thioredoxin like C-terminal domain FY132_24425 PF00578 AhpC/TSA family FY132_24435 PF07690 Major Facilitator Superfamily FY132_24440 PF00990 Diguanylate cyclase, GGDEF domain FY132_24450 PF00005 ABC transporter FY132_24450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_24460 PF00300 Histidine phosphatase superfamily (branch 1) FY132_24460 PF00106 short chain dehydrogenase FY132_24465 PF01266 FAD dependent oxidoreductase FY132_24470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_24475 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24480 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_24480 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24485 PF01266 FAD dependent oxidoreductase FY132_24495 PF13649 Methyltransferase domain FY132_24500 PF00999 Sodium/hydrogen exchanger family FY132_24505 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY132_24510 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY132_24515 PF00459 Inositol monophosphatase family FY132_24530 PF01546 Peptidase family M20/M25/M40 FY132_24535 PF00455 DeoR C terminal sensor domain FY132_24535 PF08220 DeoR-like helix-turn-helix domain FY132_24540 PF00005 ABC transporter FY132_24540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_24545 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_24545 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24550 PF00528 Binding-protein-dependent transport system inner membrane component FY132_24555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_24560 PF00465 Iron-containing alcohol dehydrogenase FY132_24565 PF00795 Carbon-nitrogen hydrolase FY132_24570 PF00005 ABC transporter FY132_24570 PF09383 NIL domain FY132_24575 PF00005 ABC transporter FY132_24575 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_24580 PF02653 Branched-chain amino acid transport system / permease component FY132_24585 PF02653 Branched-chain amino acid transport system / permease component FY132_24590 PF13458 Periplasmic binding protein FY132_24610 PF00313 'Cold-shock' DNA-binding domain FY132_24640 PF13289 SIR2-like domain FY132_24650 PF13614 AAA domain FY132_24650 PF00376 MerR family regulatory protein FY132_24655 PF02195 ParB-like nuclease domain FY132_24655 PF07506 RepB plasmid partitioning protein FY132_24660 PF03428 Replication protein C N-terminal domain FY132_24660 PF11800 Replication protein C C-terminal region FY132_24670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_24670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_24675 PF00005 ABC transporter FY132_24680 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_24685 PF00356 Bacterial regulatory proteins, lacI family FY132_24720 PF00487 Fatty acid desaturase FY132_24730 PF00313 'Cold-shock' DNA-binding domain FY132_24770 PF07516 SecA Wing and Scaffold domain FY132_24770 PF01043 SecA preprotein cross-linking domain FY132_24770 PF02810 SEC-C motif FY132_24770 PF07517 SecA DEAD-like domain FY132_24810 PF13087 AAA domain FY132_24810 PF13091 PLD-like domain FY132_24845 PF00989 PAS fold FY132_24845 PF00512 His Kinase A (phospho-acceptor) domain FY132_24845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_24850 PF00664 ABC transporter transmembrane region FY132_24850 PF00005 ABC transporter FY132_24860 PF01022 Bacterial regulatory protein, arsR family FY132_24890 PF01965 DJ-1/PfpI family FY132_24890 PF12833 Helix-turn-helix domain FY132_24895 PF07690 Major Facilitator Superfamily FY132_24900 PF07690 Major Facilitator Superfamily FY132_24905 PF01047 MarR family FY132_24920 PF07690 Major Facilitator Superfamily FY132_24950 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY132_24955 PF00561 alpha/beta hydrolase fold FY132_24965 PF04752 ChaC-like protein FY132_24970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_24970 PF03466 LysR substrate binding domain FY132_24985 PF00011 Hsp20/alpha crystallin family FY132_25030 PF04956 TrbC/VIRB2 family FY132_25035 PF05101 Type IV secretory pathway, VirB3-like protein FY132_25040 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY132_25045 PF07996 Type IV secretion system proteins FY132_25055 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY132_25065 PF04335 VirB8 protein FY132_25070 PF03524 Conjugal transfer protein FY132_25075 PF03743 Bacterial conjugation TrbI-like protein FY132_25080 PF00437 Type II/IV secretion system protein FY132_25100 PF03230 Antirestriction protein FY132_25180 PF05406 WGR domain FY132_25195 PF02534 Type IV secretory system Conjugative DNA transfer FY132_25210 PF01443 Viral (Superfamily 1) RNA helicase FY132_25210 PF03389 MobA/MobL family FY132_25210 PF17841 BID domain of Bartonella effector protein (Bep) FY132_25220 PF03466 LysR substrate binding domain FY132_25220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_25245 PF03472 Autoinducer binding domain FY132_25245 PF00196 Bacterial regulatory proteins, luxR family FY132_25250 PF00765 Autoinducer synthase FY132_25260 PF00072 Response regulator receiver domain FY132_25260 PF00486 Transcriptional regulatory protein, C terminal FY132_25285 PF00795 Carbon-nitrogen hydrolase FY132_25295 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY132_25300 PF08402 TOBE domain FY132_25300 PF00005 ABC transporter FY132_25305 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25310 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25325 PF13173 AAA domain FY132_25325 PF13635 Domain of unknown function (DUF4143) FY132_25330 PF00289 Biotin carboxylase, N-terminal domain FY132_25330 PF02436 Conserved carboxylase domain FY132_25330 PF02785 Biotin carboxylase C-terminal domain FY132_25330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY132_25330 PF00364 Biotin-requiring enzyme FY132_25330 PF00682 HMGL-like FY132_25335 PF14552 Tautomerase enzyme FY132_25340 PF03328 HpcH/HpaI aldolase/citrate lyase family FY132_25345 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY132_25355 PF01614 Bacterial transcriptional regulator FY132_25355 PF09339 IclR helix-turn-helix domain FY132_25365 PF00005 ABC transporter FY132_25370 PF00005 ABC transporter FY132_25380 PF02653 Branched-chain amino acid transport system / permease component FY132_25380 PF11862 Domain of unknown function (DUF3382) FY132_25400 PF08502 LeuA allosteric (dimerisation) domain FY132_25400 PF00682 HMGL-like FY132_25405 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25410 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25415 PF00480 ROK family FY132_25415 PF01047 MarR family FY132_25420 PF00128 Alpha amylase, catalytic domain FY132_25425 PF01546 Peptidase family M20/M25/M40 FY132_25425 PF07687 Peptidase dimerisation domain FY132_25430 PF01261 Xylose isomerase-like TIM barrel FY132_25435 PF00005 ABC transporter FY132_25435 PF17912 MalK OB fold domain FY132_25445 PF00480 ROK family FY132_25450 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25455 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25460 PF01547 Bacterial extracellular solute-binding protein FY132_25465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY132_25465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY132_25480 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY132_25495 PF00005 ABC transporter FY132_25500 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25505 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25510 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY132_25515 PF00005 ABC transporter FY132_25515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_25520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_25520 PF00005 ABC transporter FY132_25525 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_25525 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25530 PF00528 Binding-protein-dependent transport system inner membrane component FY132_25535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_25540 PF03737 Aldolase/RraA FY132_25545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_25545 PF03466 LysR substrate binding domain FY132_25550 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY132_25555 PF01546 Peptidase family M20/M25/M40 FY132_25555 PF07687 Peptidase dimerisation domain FY132_25560 PF01156 Inosine-uridine preferring nucleoside hydrolase FY132_25580 PF00857 Isochorismatase family FY132_25595 PF02678 Pirin FY132_25595 PF17954 Quercetinase C-terminal cupin domain FY132_25600 PF03358 NADPH-dependent FMN reductase FY132_25605 PF00561 alpha/beta hydrolase fold FY132_25625 PF13533 Biotin-lipoyl like FY132_25630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_25630 PF03466 LysR substrate binding domain FY132_25635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY132_25640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_25640 PF03466 LysR substrate binding domain FY132_25655 PF00857 Isochorismatase family FY132_25660 PF03466 LysR substrate binding domain FY132_25660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_25670 PF03551 Transcriptional regulator PadR-like family FY132_25730 PF02653 Branched-chain amino acid transport system / permease component FY132_25735 PF00005 ABC transporter FY132_25740 PF00005 ABC transporter FY132_25740 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_25750 PF12833 Helix-turn-helix domain FY132_25750 PF14525 AraC-binding-like domain FY132_25810 PF07729 FCD domain FY132_25810 PF00392 Bacterial regulatory proteins, gntR family FY132_25815 PF00775 Dioxygenase FY132_25815 PF04444 Catechol dioxygenase N terminus FY132_25820 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY132_25825 PF03328 HpcH/HpaI aldolase/citrate lyase family FY132_25835 PF01571 Aminomethyltransferase folate-binding domain FY132_25840 PF02219 Methylenetetrahydrofolate reductase FY132_25845 PF00551 Formyl transferase FY132_25855 PF08240 Alcohol dehydrogenase GroES-like domain FY132_25855 PF00107 Zinc-binding dehydrogenase FY132_25865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_25865 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_25865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY132_25865 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY132_25870 PF00378 Enoyl-CoA hydratase/isomerase FY132_25875 PF00501 AMP-binding enzyme FY132_25875 PF13193 AMP-binding enzyme C-terminal domain FY132_25880 PF00171 Aldehyde dehydrogenase family FY132_25885 PF07690 Major Facilitator Superfamily FY132_25900 PF17158 Membrane-associated sensor, integral membrane domain FY132_25900 PF00990 Diguanylate cyclase, GGDEF domain FY132_25920 PF12802 MarR family FY132_25930 PF13458 Periplasmic binding protein FY132_25935 PF02653 Branched-chain amino acid transport system / permease component FY132_25945 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_25945 PF00005 ABC transporter FY132_25950 PF00005 ABC transporter FY132_25960 PF00171 Aldehyde dehydrogenase family FY132_25965 PF07687 Peptidase dimerisation domain FY132_25965 PF01546 Peptidase family M20/M25/M40 FY132_25970 PF00202 Aminotransferase class-III FY132_25975 PF00171 Aldehyde dehydrogenase family FY132_25980 PF08450 SMP-30/Gluconolactonase/LRE-like region FY132_25985 PF01261 Xylose isomerase-like TIM barrel FY132_25990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY132_25990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY132_26010 PF01979 Amidohydrolase family FY132_26015 PF00480 ROK family FY132_26015 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY132_26020 PF02653 Branched-chain amino acid transport system / permease component FY132_26025 PF13407 Periplasmic binding protein domain FY132_26030 PF00005 ABC transporter FY132_26050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_26050 PF03466 LysR substrate binding domain FY132_26055 PF07690 Major Facilitator Superfamily FY132_26065 PF00135 Carboxylesterase family FY132_26075 PF00135 Carboxylesterase family FY132_26085 PF00005 ABC transporter FY132_26090 PF02653 Branched-chain amino acid transport system / permease component FY132_26095 PF00135 Carboxylesterase family FY132_26105 PF04303 PrpF protein FY132_26110 PF03737 Aldolase/RraA FY132_26115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY132_26120 PF02585 GlcNAc-PI de-N-acetylase FY132_26135 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY132_26135 PF00005 ABC transporter FY132_26140 PF00005 ABC transporter FY132_26145 PF13458 Periplasmic binding protein FY132_26155 PF03466 LysR substrate binding domain FY132_26155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_26160 PF09339 IclR helix-turn-helix domain FY132_26160 PF01614 Bacterial transcriptional regulator FY132_26170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY132_26170 PF13378 Enolase C-terminal domain-like FY132_26180 PF00005 ABC transporter FY132_26180 PF08402 TOBE domain FY132_26185 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26190 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26200 PF07690 Major Facilitator Superfamily FY132_26235 PF03928 Haem-degrading FY132_26255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_26260 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26265 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_26265 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26270 PF00005 ABC transporter FY132_26270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_26280 PF00296 Luciferase-like monooxygenase FY132_26290 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26295 PF00005 ABC transporter FY132_26300 PF05199 GMC oxidoreductase FY132_26300 PF00732 GMC oxidoreductase FY132_26305 PF00171 Aldehyde dehydrogenase family FY132_26320 PF00392 Bacterial regulatory proteins, gntR family FY132_26320 PF07729 FCD domain FY132_26325 PF04324 BFD-like [2Fe-2S] binding domain FY132_26325 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY132_26335 PF01266 FAD dependent oxidoreductase FY132_26345 PF01958 Domain of unknown function DUF108 FY132_26345 PF03447 Homoserine dehydrogenase, NAD binding domain FY132_26350 PF01042 Endoribonuclease L-PSP FY132_26355 PF02371 Transposase IS116/IS110/IS902 family FY132_26355 PF01548 Transposase FY132_26395 PF00857 Isochorismatase family FY132_26405 PF00440 Bacterial regulatory proteins, tetR family FY132_26410 PF00005 ABC transporter FY132_26415 PF01032 FecCD transport family FY132_26420 PF01032 FecCD transport family FY132_26430 PF00394 Multicopper oxidase FY132_26430 PF07731 Multicopper oxidase FY132_26430 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY132_26430 PF07732 Multicopper oxidase FY132_26435 PF02885 Glycosyl transferase family, helical bundle domain FY132_26435 PF00591 Glycosyl transferase family, a/b domain FY132_26440 PF00593 TonB dependent receptor FY132_26440 PF07715 TonB-dependent Receptor Plug Domain FY132_26475 PF03551 Transcriptional regulator PadR-like family FY132_26510 PF07731 Multicopper oxidase FY132_26510 PF00394 Multicopper oxidase FY132_26510 PF07732 Multicopper oxidase FY132_26530 PF01209 ubiE/COQ5 methyltransferase family FY132_26545 PF04079 Segregation and condensation complex subunit ScpB FY132_26555 PF00589 Phage integrase family FY132_26565 PF13614 AAA domain FY132_26570 PF02195 ParB-like nuclease domain FY132_26570 PF07506 RepB plasmid partitioning protein FY132_26575 PF03428 Replication protein C N-terminal domain FY132_26575 PF11800 Replication protein C C-terminal region FY132_26580 PF00239 Resolvase, N terminal domain FY132_26585 PF07756 Protein of unknown function (DUF1612) FY132_26585 PF11972 HTH DNA binding domain FY132_26605 PF08808 RES domain FY132_26625 PF03466 LysR substrate binding domain FY132_26625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_26635 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26640 PF00005 ABC transporter FY132_26645 PF09084 NMT1/THI5 like FY132_26650 PF00296 Luciferase-like monooxygenase FY132_26655 PF00296 Luciferase-like monooxygenase FY132_26665 PF00732 GMC oxidoreductase FY132_26665 PF05199 GMC oxidoreductase FY132_26670 PF00561 alpha/beta hydrolase fold FY132_26690 PF02653 Branched-chain amino acid transport system / permease component FY132_26695 PF00005 ABC transporter FY132_26705 PF00753 Metallo-beta-lactamase superfamily FY132_26710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY132_26710 PF02770 Acyl-CoA dehydrogenase, middle domain FY132_26710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY132_26715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_26720 PF00005 ABC transporter FY132_26720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_26725 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_26725 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26730 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26740 PF00296 Luciferase-like monooxygenase FY132_26745 PF00296 Luciferase-like monooxygenase FY132_26750 PF03466 LysR substrate binding domain FY132_26750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY132_26760 PF01434 Peptidase family M41 FY132_26760 PF17862 AAA+ lid domain FY132_26760 PF00004 ATPase family associated with various cellular activities (AAA) FY132_26775 PF00005 ABC transporter FY132_26775 PF00664 ABC transporter transmembrane region FY132_26780 PF00005 ABC transporter FY132_26780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_26785 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_26785 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26790 PF00528 Binding-protein-dependent transport system inner membrane component FY132_26795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_26805 PF01261 Xylose isomerase-like TIM barrel FY132_26810 PF00291 Pyridoxal-phosphate dependent enzyme FY132_26815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY132_26825 PF02195 ParB-like nuclease domain FY132_26835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY132_26835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY132_26835 PF01842 ACT domain FY132_26840 PF00483 Nucleotidyl transferase FY132_26845 PF00155 Aminotransferase class I and II FY132_26870 PF01068 ATP dependent DNA ligase domain FY132_26870 PF04679 ATP dependent DNA ligase C terminal region FY132_26870 PF13298 DNA polymerase Ligase (LigD) FY132_26885 PF02811 PHP domain FY132_26885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY132_26885 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY132_26885 PF14579 Helix-hairpin-helix motif FY132_26905 PF17841 BID domain of Bartonella effector protein (Bep) FY132_26905 PF02661 Fic/DOC family FY132_26930 PF17762 HTH domain found in ParB protein FY132_26930 PF02195 ParB-like nuclease domain FY132_26955 PF03831 PhnA domain FY132_26955 PF08274 PhnA Zinc-Ribbon FY132_27005 PF05284 Protein of unknown function (DUF736) FY132_27010 PF00216 Bacterial DNA-binding protein FY132_27030 PF02534 Type IV secretory system Conjugative DNA transfer FY132_27035 PF06412 Conjugal transfer protein TraD FY132_27040 PF07820 TraC-like protein FY132_27045 PF17841 BID domain of Bartonella effector protein (Bep) FY132_27045 PF03389 MobA/MobL family FY132_27045 PF01443 Viral (Superfamily 1) RNA helicase FY132_27050 PF10502 Signal peptidase, peptidase S26 FY132_27055 PF00795 Carbon-nitrogen hydrolase FY132_27060 PF06871 TraH_2 FY132_27065 PF09228 Prokaryotic Transcriptional repressor TraM FY132_27070 PF08447 PAS fold FY132_27070 PF13426 PAS domain FY132_27070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY132_27080 PF03472 Autoinducer binding domain FY132_27080 PF00196 Bacterial regulatory proteins, luxR family FY132_27085 PF00128 Alpha amylase, catalytic domain FY132_27090 PF02690 Na+/Pi-cotransporter FY132_27100 PF08220 DeoR-like helix-turn-helix domain FY132_27100 PF00455 DeoR C terminal sensor domain FY132_27105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_27110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_27110 PF00005 ABC transporter FY132_27115 PF00005 ABC transporter FY132_27115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_27120 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27125 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_27125 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27130 PF03009 Glycerophosphoryl diester phosphodiesterase family FY132_27135 PF00459 Inositol monophosphatase family FY132_27160 PF00067 Cytochrome P450 FY132_27165 PF00067 Cytochrome P450 FY132_27180 PF06903 VirK protein FY132_27215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY132_27215 PF00512 His Kinase A (phospho-acceptor) domain FY132_27220 PF01464 Transglycosylase SLT domain FY132_27225 PF04956 TrbC/VIRB2 family FY132_27230 PF05101 Type IV secretory pathway, VirB3-like protein FY132_27235 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY132_27245 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY132_27250 PF17413 Outer membrane lipoprotein virB7 FY132_27255 PF04335 VirB8 protein FY132_27260 PF03524 Conjugal transfer protein FY132_27265 PF03743 Bacterial conjugation TrbI-like protein FY132_27270 PF00437 Type II/IV secretion system protein FY132_27275 PF00072 Response regulator receiver domain FY132_27275 PF00486 Transcriptional regulatory protein, C terminal FY132_27280 PF07181 VirC2 protein FY132_27285 PF07015 VirC1 protein FY132_27290 PF07328 T-DNA border endonuclease VirD1 FY132_27295 PF03432 Relaxase/Mobilisation nuclease domain FY132_27305 PF02534 Type IV secretory system Conjugative DNA transfer FY132_27325 PF12189 Single-strand DNA-binding protein FY132_27330 PF07229 VirE2 FY132_27350 PF05717 IS66 Orf2 like protein FY132_27355 PF00196 Bacterial regulatory proteins, luxR family FY132_27355 PF03472 Autoinducer binding domain FY132_27370 PF00459 Inositol monophosphatase family FY132_27405 PF02027 RolB/RolC glucosidase family FY132_27410 PF01425 Amidase FY132_27415 PF02027 RolB/RolC glucosidase family FY132_27415 PF01593 Flavin containing amine oxidoreductase FY132_27425 PF02027 RolB/RolC glucosidase family FY132_27430 PF01380 SIS domain FY132_27435 PF00106 short chain dehydrogenase FY132_27435 PF00300 Histidine phosphatase superfamily (branch 1) FY132_27440 PF00557 Metallopeptidase family M24 FY132_27440 PF01321 Creatinase/Prolidase N-terminal domain FY132_27460 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27465 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27470 PF00005 ABC transporter FY132_27470 PF08402 TOBE domain FY132_27500 PF00005 ABC transporter FY132_27500 PF08402 TOBE domain FY132_27505 PF00557 Metallopeptidase family M24 FY132_27505 PF01321 Creatinase/Prolidase N-terminal domain FY132_27510 PF00294 pfkB family carbohydrate kinase FY132_27525 PF00106 short chain dehydrogenase FY132_27530 PF00920 Dehydratase family FY132_27535 PF00248 Aldo/keto reductase family FY132_27550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_27555 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_27560 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_27565 PF00005 ABC transporter FY132_27570 PF00106 short chain dehydrogenase FY132_27570 PF00300 Histidine phosphatase superfamily (branch 1) FY132_27575 PF01266 FAD dependent oxidoreductase FY132_27580 PF01968 Hydantoinase/oxoprolinase FY132_27580 PF05378 Hydantoinase/oxoprolinase N-terminal region FY132_27595 PF08220 DeoR-like helix-turn-helix domain FY132_27595 PF00455 DeoR C terminal sensor domain FY132_27605 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27610 PF00528 Binding-protein-dependent transport system inner membrane component FY132_27610 PF12911 N-terminal TM domain of oligopeptide transport permease C FY132_27615 PF00005 ABC transporter FY132_27615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY132_27620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY132_27630 PF03743 Bacterial conjugation TrbI-like protein FY132_27640 PF03524 Conjugal transfer protein FY132_27645 PF04335 VirB8 protein FY132_27650 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY132_27655 PF10907 Protein of unknown function (DUF2749) FY132_27665 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY132_27670 PF05101 Type IV secretory pathway, VirB3-like protein FY132_27675 PF04956 TrbC/VIRB2 family FY132_27680 PF00437 Type II/IV secretion system protein FY132_27685 PF00765 Autoinducer synthase