locus-tag	class	description
FY132_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FY132_00010	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FY132_00015	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FY132_00020	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FY132_00025	COG1420	regulation of RNA biosynthetic process
FY132_00030	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FY132_00035	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY132_00040	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FY132_00050	COG1137	ATPase activity
FY132_00055	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FY132_00065	COG0616	signal peptide processing
FY132_00070	COG0776	regulation of translation
FY132_00080	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FY132_00085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FY132_00090	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FY132_00105	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FY132_00110	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FY132_00115	COG0728	peptidoglycan biosynthetic process
FY132_00125	COG0180	Tryptophanyl-tRNA synthetase
FY132_00135	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FY132_00140	COG1214	PFAM Peptidase M22, glycoprotease
FY132_00160	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FY132_00165	COG1702	phosphate starvation-inducible protein PhoH
FY132_00170	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FY132_00180	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FY132_00185	COG1396	sequence-specific DNA binding
FY132_00190	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FY132_00195	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FY132_00200	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_00210	COG0242	peptide deformylase activity
FY132_00215	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FY132_00220	COG0101	tRNA pseudouridine synthase activity
FY132_00230	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY132_00235	COG2171	N-acyltransferase activity
FY132_00245	COG0840	transmembrane signaling receptor activity
FY132_00250	COG1957	nucleoside hydrolase
FY132_00255	COG0071	Belongs to the small heat shock protein (HSP20) family
FY132_00280	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FY132_00290	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FY132_00295	COG0706	membrane insertase activity
FY132_00300	COG0594	ribonuclease P activity
FY132_00305	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FY132_00310	COG0840	transmembrane signaling receptor activity
FY132_00325	COG2226	methyltransferase
FY132_00330	COG3842	ATPase activity
FY132_00335	COG1175	transmembrane transport
FY132_00340	COG0395	ABC-type sugar transport system, permease component
FY132_00355	COG0427	acetyl-CoA hydrolase
FY132_00365	COG3938	Belongs to the proline racemase family
FY132_00370	COG0418	dihydroorotase activity
FY132_00375	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FY132_00395	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FY132_00400	COG0166	Belongs to the GPI family
FY132_00405	COG0318	PFAM AMP-dependent synthetase and ligase
FY132_00410	COG3842	ATPase activity
FY132_00415	COG1840	ABC-type Fe3 transport system, periplasmic component
FY132_00420	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY132_00425	COG4774	siderophore transport
FY132_00470	COG2326	polyphosphate kinase activity
FY132_00475	COG5002	protein histidine kinase activity
FY132_00480	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FY132_00485	COG0573	inorganic phosphate transmembrane transporter activity
FY132_00495	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FY132_00500	COG0704	Plays a role in the regulation of phosphate uptake
FY132_00505	COG0745	RESPONSE REGULATOR receiver
FY132_00515	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FY132_00520	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FY132_00530	COG2967	ApaG domain
FY132_00545	COG0717	Belongs to the dCTP deaminase family
FY132_00605	COG3561	AntA/AntB antirepressor
FY132_00645	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FY132_00700	COG5484	DNA packaging
FY132_00700	COG3728	DNA packaging
FY132_00825	COG0582	viral genome integration into host DNA
FY132_00850	COG0419	ATPase involved in DNA repair
FY132_00870	COG1396	sequence-specific DNA binding
FY132_00910	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
FY132_00915	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FY132_00965	COG0167	dihydroorotate dehydrogenase activity
FY132_01000	COG1959	2 iron, 2 sulfur cluster binding
FY132_01005	COG1201	RNA secondary structure unwinding
FY132_01035	COG1960	acyl-CoA dehydrogenase activity
FY132_01040	COG0183	Belongs to the thiolase family
FY132_01045	COG1024	Enoyl-CoA hydratase
FY132_01045	COG1250	3-hydroxyacyl-CoA dehydrogenase
FY132_01070	COG1320	monovalent cation:proton antiporter activity
FY132_01075	COG2212	antiporter activity
FY132_01080	COG1863	multisubunit Na H antiporter MnhE subunit
FY132_01085	COG0651	ATP synthesis coupled electron transport
FY132_01090	COG1006	Multisubunit Na H antiporter MnhC subunit
FY132_01095	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FY132_01095	COG2111	Na H antiporter
FY132_01105	COG0840	transmembrane signaling receptor activity
FY132_01115	COG0745	RESPONSE REGULATOR receiver
FY132_01120	COG0643	Histidine kinase
FY132_01120	COG2198	Histidine kinase
FY132_01125	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FY132_01130	COG2201	protein-glutamate methylesterase activity
FY132_01135	COG0745	RESPONSE REGULATOR receiver
FY132_01140	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
FY132_01150	COG1766	The M ring may be actively involved in energy transduction
FY132_01155	COG2771	luxR family
FY132_01165	COG0840	transmembrane signaling receptor activity
FY132_01165	COG2972	Histidine kinase
FY132_01170	COG2198	Histidine kinase
FY132_01170	COG2205	protein histidine kinase activity
FY132_01170	COG0784	Response regulator, receiver
FY132_01175	COG1970	mechanosensitive ion channel activity
FY132_01180	COG0436	Aminotransferase
FY132_01195	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FY132_01200	COG0424	maF-like protein
FY132_01205	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FY132_01215	COG5328	Belongs to the UPF0262 family
FY132_01220	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FY132_01230	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FY132_01250	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FY132_01260	COG1338	Plays a role in the flagellum-specific transport system
FY132_01270	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FY132_01280	COG1706	bacterial-type flagellum-dependent cell motility
FY132_01285	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
FY132_01290	COG4786	Flagellar basal body rod
FY132_01295	COG1677	Flagellar hook-basal body complex protein FliE
FY132_01300	COG1558	bacterial-type flagellum-dependent cell motility
FY132_01305	COG1815	bacterial-type flagellum-dependent cell motility
FY132_01315	COG1157	protein secretion by the type III secretion system
FY132_01320	COG4786	Flagellar basal body rod
FY132_01330	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FY132_01335	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY132_01340	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY132_01345	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FY132_01350	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FY132_01370	COG1360	Flagellar Motor Protein
FY132_01415	COG5443	negative regulation of bacterial-type flagellum assembly
FY132_01420	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FY132_01430	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FY132_01470	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FY132_01475	COG1609	Transcriptional regulator
FY132_01480	COG1653	transport
FY132_01485	COG1175	transmembrane transport
FY132_01490	COG0395	ABC-type sugar transport system, permease component
FY132_01495	COG0366	Alpha amylase catalytic
FY132_01500	COG3842	ATPase activity
FY132_01515	COG0129	dihydroxy-acid dehydratase activity
FY132_01520	COG0363	glucosamine-6-phosphate deaminase activity
FY132_01525	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FY132_01530	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_01540	COG2081	HI0933 family
FY132_01560	COG2224	Isocitrate lyase
FY132_01575	COG3842	ATPase activity
FY132_01580	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_01585	COG1177	transmembrane transport
FY132_01600	COG2205	protein histidine kinase activity
FY132_01610	COG0248	Ppx GppA phosphatase
FY132_01615	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FY132_01620	COG0477	Major facilitator Superfamily
FY132_01650	COG0521	Mo-molybdopterin cofactor biosynthetic process
FY132_01655	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FY132_01665	COG0142	geranyltranstransferase activity
FY132_01690	COG0752	glycyl-tRNA synthetase alpha subunit
FY132_01700	COG1704	LemA family
FY132_01705	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FY132_01715	COG0751	glycine-tRNA ligase activity
FY132_01720	COG1683	Conserved Protein
FY132_01725	COG0840	transmembrane signaling receptor activity
FY132_01735	COG0151	Belongs to the GarS family
FY132_01740	COG2183	response to ionizing radiation
FY132_01745	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY132_01770	COG0583	DNA-binding transcription factor activity
FY132_01790	COG0306	phosphate transporter
FY132_01800	COG0561	phosphatase activity
FY132_01805	COG0438	transferase activity, transferring glycosyl groups
FY132_01810	COG2186	Transcriptional regulator
FY132_01820	COG0583	DNA-binding transcription factor activity
FY132_01825	COG0277	FAD linked oxidase domain protein
FY132_01830	COG0277	FAD linked oxidase domain protein
FY132_01835	COG0247	lactate metabolic process
FY132_01845	COG1376	ErfK ybiS ycfS ynhG family protein
FY132_01850	COG2818	Glycosylase
FY132_01860	COG2855	membrane
FY132_01865	COG0583	DNA-binding transcription factor activity
FY132_01895	COG0124	histidyl-tRNA synthetase
FY132_01905	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FY132_01910	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FY132_01915	COG2259	Doxx family
FY132_01925	COG0459	protein refolding
FY132_01930	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FY132_01940	COG0196	riboflavin kinase activity
FY132_01945	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FY132_01955	COG0590	tRNA wobble adenosine to inosine editing
FY132_01960	COG1187	pseudouridine synthase activity
FY132_01965	COG0742	ribosomal rna small subunit methyltransferase
FY132_01970	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY132_01980	COG0312	modulator of DNA gyrase
FY132_01985	COG0483	inositol monophosphate 1-phosphatase activity
FY132_01995	COG1519	Transferase
FY132_02005	COG1663	tetraacyldisaccharide 4'-kinase activity
FY132_02015	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FY132_02020	COG0745	RESPONSE REGULATOR receiver
FY132_02025	COG5001	Diguanylate cyclase
FY132_02025	COG3300	MHYT domain
FY132_02030	COG3386	PFAM SMP-30 Gluconolaconase
FY132_02035	COG0800	Aldolase
FY132_02040	COG3734	2-keto-3-deoxy-galactonokinase
FY132_02045	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_02050	COG1414	Transcriptional regulator
FY132_02055	COG2197	response regulator
FY132_02070	COG0598	Magnesium transport protein CorA
FY132_02075	COG3158	transport of potassium into the cell
FY132_02090	COG0356	it plays a direct role in the translocation of protons across the membrane
FY132_02100	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FY132_02105	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FY132_02120	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FY132_02140	COG0009	L-threonylcarbamoyladenylate synthase
FY132_02150	COG4638	Rieske (2fe-2S)
FY132_02175	COG1960	acyl-CoA dehydrogenase activity
FY132_02190	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FY132_02195	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FY132_02200	COG0840	transmembrane signaling receptor activity
FY132_02210	COG1522	sequence-specific DNA binding
FY132_02235	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FY132_02240	COG1741	Belongs to the pirin family
FY132_02245	COG1722	exodeoxyribonuclease VII activity
FY132_02250	COG0123	including yeast histone deacetylase and acetoin utilization protein
FY132_02255	COG1268	BioY protein
FY132_02260	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FY132_02265	COG1122	ATPase activity
FY132_02270	COG3214	Protein conserved in bacteria
FY132_02275	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY132_02275	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY132_02280	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FY132_02300	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FY132_02315	COG0259	pyridoxamine-phosphate oxidase activity
FY132_02345	COG0312	modulator of DNA gyrase
FY132_02360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY132_02365	COG0109	protoheme IX farnesyltransferase activity
FY132_02370	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FY132_02385	COG3346	SURF1 family
FY132_02390	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FY132_02395	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FY132_02400	COG0328	RNA-DNA hybrid ribonuclease activity
FY132_02410	COG0678	peroxiredoxin activity
FY132_02410	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FY132_02420	COG1678	Uncharacterized ACR, COG1678
FY132_02425	COG3237	CsbD-like
FY132_02435	COG3300	MHYT domain
FY132_02435	COG5001	Diguanylate cyclase
FY132_02440	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FY132_02445	COG0612	Peptidase, M16
FY132_02470	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY132_02475	COG1802	Transcriptional regulator
FY132_02490	COG2189	Belongs to the N(4) N(6)-methyltransferase family
FY132_02495	COG3609	addiction module antidote protein, CC2985 family
FY132_02500	COG3668	Plasmid stabilization system
FY132_02510	COG1194	a g-specific adenine glycosylase
FY132_02525	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FY132_02530	COG1196	nuclear chromosome segregation
FY132_02535	COG2514	catechol 2,3-dioxygenase activity
FY132_02540	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FY132_02540	COG0574	Belongs to the PEP-utilizing enzyme family
FY132_02550	COG1823	symporter activity
FY132_02575	COG0579	oxidoreductase
FY132_02590	COG2895	sulfate adenylyltransferase (ATP) activity
FY132_02595	COG0175	sulfate reduction
FY132_02600	COG0175	sulfate reduction
FY132_02605	COG1959	2 iron, 2 sulfur cluster binding
FY132_02610	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FY132_02615	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY132_02620	COG4208	sulfate ABC transporter
FY132_02625	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY132_02635	COG2199	diguanylate cyclase activity
FY132_02635	COG2200	EAL domain
FY132_02635	COG2203	Gaf domain
FY132_02645	COG1309	transcriptional regulator
FY132_02650	COG1012	belongs to the aldehyde dehydrogenase family
FY132_02655	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FY132_02685	COG0625	glutathione transferase activity
FY132_02695	COG0477	Major facilitator Superfamily
FY132_02705	COG3657	addiction module killer protein
FY132_02715	COG1793	dna ligase
FY132_02735	COG1376	ErfK ybiS ycfS ynhG family protein
FY132_02740	COG1376	ErfK ybiS ycfS ynhG family protein
FY132_02745	COG1846	Transcriptional regulator
FY132_02750	COG1764	response to oxidative stress
FY132_02765	COG0488	(ABC) transporter
FY132_02800	COG4221	oxidoreductase activity
FY132_02815	COG0433	COG0433 Predicted ATPase
FY132_02825	COG1733	regulation of RNA biosynthetic process
FY132_02830	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
FY132_02845	COG0656	L-ascorbic acid biosynthetic process
FY132_02850	COG3781	membrane
FY132_02855	COG2378	regulation of single-species biofilm formation
FY132_02865	COG4106	trans-aconitate 2-methyltransferase activity
FY132_02870	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY132_02875	COG0840	transmembrane signaling receptor activity
FY132_02880	COG0583	DNA-binding transcription factor activity
FY132_02895	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FY132_02915	COG3909	cytochrome
FY132_02920	COG2010	Cytochrome c
FY132_02955	COG0789	Transcriptional regulator
FY132_02980	COG0517	IMP dehydrogenase activity
FY132_02980	COG4175	Glycine betaine
FY132_02985	COG4176	ABC-type proline glycine betaine transport system permease component
FY132_03005	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_03015	COG2169	Transcriptional regulator
FY132_03015	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY132_03025	COG2514	catechol 2,3-dioxygenase activity
FY132_03045	COG1272	protein, Hemolysin III
FY132_03055	COG1280	lysine exporter protein (LysE YggA)
FY132_03060	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FY132_03065	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FY132_03065	COG2111	Na H antiporter
FY132_03070	COG2111	Na H antiporter
FY132_03075	COG1006	Multisubunit Na H antiporter MnhC subunit
FY132_03080	COG0651	ATP synthesis coupled electron transport
FY132_03085	COG1863	multisubunit Na H antiporter MnhE subunit
FY132_03090	COG2212	antiporter activity
FY132_03095	COG1320	monovalent cation:proton antiporter activity
FY132_03100	COG4957	zinc ion binding
FY132_03115	COG2166	iron-sulfur cluster assembly
FY132_03125	COG2205	protein histidine kinase activity
FY132_03170	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY132_03175	COG2983	Belongs to the UPF0260 family
FY132_03190	COG2217	Heavy metal translocating P-type atpase
FY132_03220	COG2814	Major facilitator Superfamily
FY132_03225	COG1621	beta-fructofuranosidase activity
FY132_03230	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FY132_03280	COG4695	Portal protein
FY132_03385	COG4235	cytochrome complex assembly
FY132_03390	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FY132_03395	COG1138	Cytochrome C-type biogenesis protein
FY132_03400	COG3088	subunit of a heme lyase
FY132_03405	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY132_03410	COG0745	RESPONSE REGULATOR receiver
FY132_03415	COG2205	protein histidine kinase activity
FY132_03420	COG3011	Protein conserved in bacteria
FY132_03425	COG3713	MltA-interacting MipA family protein
FY132_03430	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FY132_03435	COG2202	Pas domain
FY132_03435	COG2205	protein histidine kinase activity
FY132_03445	COG0308	aminopeptidase N
FY132_03450	COG0697	spore germination
FY132_03465	COG0443	Heat shock 70 kDa protein
FY132_03500	COG0604	alcohol dehydrogenase
FY132_03505	COG1733	regulation of RNA biosynthetic process
FY132_03510	COG1968	undecaprenyl-diphosphatase activity
FY132_03515	COG2239	Acts as a magnesium transporter
FY132_03520	COG2814	Major facilitator Superfamily
FY132_03545	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FY132_03570	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FY132_03610	COG0741	lytic transglycosylase activity
FY132_03615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_03620	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FY132_03625	COG0840	transmembrane signaling receptor activity
FY132_03635	COG1758	RNA polymerase activity
FY132_03655	COG0736	holo-[acyl-carrier-protein] synthase activity
FY132_03660	COG0681	Belongs to the peptidase S26 family
FY132_03665	COG0571	ribonuclease III activity
FY132_03670	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FY132_03680	COG0784	Response regulator, receiver
FY132_03685	COG1381	Involved in DNA repair and RecF pathway recombination
FY132_03695	COG2226	methyltransferase
FY132_03705	COG1418	mRNA catabolic process
FY132_03715	COG0346	lactoylglutathione lyase activity
FY132_03730	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_03735	COG3443	Belongs to the bacterial solute-binding protein 9 family
FY132_03740	COG0668	transmembrane transport
FY132_03750	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FY132_03780	COG1742	UPF0060 membrane protein
FY132_03795	COG1183	phosphatidylcholine synthase activity
FY132_03800	COG0688	phosphatidylethanolamine metabolic process
FY132_03805	COG5265	(ABC) transporter
FY132_03845	COG2852	Protein conserved in bacteria
FY132_03850	COG0215	cysteine-tRNA ligase activity
FY132_03855	COG4221	oxidoreductase activity
FY132_03860	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FY132_03865	COG1286	toxin biosynthetic process
FY132_03880	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY132_03890	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
FY132_03900	COG0305	Participates in initiation and elongation during chromosome replication
FY132_03920	COG0359	binds to the 23S rRNA
FY132_03930	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FY132_03935	COG0360	Binds together with S18 to 16S ribosomal RNA
FY132_03945	COG0667	Aldo Keto reductase
FY132_03950	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FY132_03960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY132_03965	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY132_03975	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FY132_03980	COG1561	YicC-like family, N-terminal region
FY132_03985	COG0194	GDP metabolic process
FY132_04000	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FY132_04005	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY132_04015	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FY132_04030	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FY132_04050	COG2203	Gaf domain
FY132_04050	COG3706	GGDEF domain
FY132_04050	COG4251	negative regulation of phosphorylation
FY132_04050	COG5001	Diguanylate cyclase
FY132_04055	COG5001	Diguanylate cyclase
FY132_04055	COG3300	MHYT domain
FY132_04060	COG4191	Histidine kinase
FY132_04065	COG4566	intracellular signal transduction
FY132_04075	COG0488	(ABC) transporter
FY132_04080	COG3706	GGDEF domain
FY132_04090	COG0105	UTP biosynthetic process
FY132_04110	COG0314	molybdopterin synthase activity
FY132_04120	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FY132_04125	COG0322	excinuclease ABC activity
FY132_04130	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_04155	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FY132_04160	COG0243	molybdopterin cofactor binding
FY132_04175	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FY132_04180	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FY132_04185	COG2226	methyltransferase
FY132_04190	COG0628	permease
FY132_04200	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FY132_04205	COG0248	Ppx GppA phosphatase
FY132_04230	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
FY132_04240	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FY132_04245	COG0477	Major facilitator Superfamily
FY132_04250	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FY132_04260	COG0840	transmembrane signaling receptor activity
FY132_04265	COG0659	secondary active sulfate transmembrane transporter activity
FY132_04275	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FY132_04280	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FY132_04290	COG0113	porphobilinogen synthase activity
FY132_04310	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FY132_04315	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FY132_04320	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY132_04320	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FY132_04330	COG1280	lysine exporter protein (LysE YggA)
FY132_04335	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FY132_04340	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FY132_04345	COG2814	Major facilitator Superfamily
FY132_04350	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
FY132_04370	COG0416	fatty acid biosynthetic process
FY132_04375	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FY132_04380	COG0776	regulation of translation
FY132_04415	COG0601	transmembrane transport
FY132_04420	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_04425	COG0444	Belongs to the ABC transporter superfamily
FY132_04435	COG0747	negative chemotaxis
FY132_04445	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FY132_04450	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FY132_04465	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FY132_04470	COG0583	DNA-binding transcription factor activity
FY132_04475	COG0737	Belongs to the 5'-nucleotidase family
FY132_04495	COG2897	thiosulfate sulfurtransferase activity
FY132_04510	COG0415	Belongs to the DNA photolyase family
FY132_04520	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY132_04550	COG3932	Exopolysaccharide synthesis, ExoD
FY132_04555	COG1238	metal cluster binding
FY132_04630	COG1612	heme a metabolic process
FY132_04640	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FY132_04645	COG0010	Belongs to the arginase family
FY132_04650	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FY132_04655	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FY132_04665	COG1832	CoA-binding protein
FY132_04695	COG2124	cytochrome p450
FY132_04700	COG2199	diguanylate cyclase activity
FY132_04705	COG0740	serine-type endopeptidase activity
FY132_04710	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FY132_04715	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FY132_04725	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY132_04750	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY132_04755	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY132_04760	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY132_04770	COG0649	NAD binding
FY132_04780	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FY132_04785	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
FY132_04795	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FY132_04800	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FY132_04810	COG0713	ATP synthesis coupled electron transport
FY132_04825	COG1007	ATP synthesis coupled electron transport
FY132_04830	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
FY132_04830	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
FY132_04845	COG0442	prolyl-tRNA aminoacylation
FY132_04855	COG1136	(ABC) transporter
FY132_04870	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FY132_04890	COG0784	Response regulator, receiver
FY132_04900	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FY132_04905	COG0477	Major facilitator Superfamily
FY132_04920	COG0557	exoribonuclease II activity
FY132_04925	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FY132_04935	COG0758	DNA mediated transformation
FY132_04940	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FY132_04950	COG0540	Belongs to the ATCase OTCase family
FY132_04965	COG1960	acyl-CoA dehydrogenase activity
FY132_04970	COG0456	acetyltransferase
FY132_04990	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FY132_04995	COG2824	Alkylphosphonate utilization operon protein PhnA
FY132_05000	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FY132_05005	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FY132_05010	COG0154	amidase activity
FY132_05015	COG0456	acetyltransferase
FY132_05020	COG3811	Belongs to the UPF0386 family
FY132_05035	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FY132_05065	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FY132_05070	COG0439	Biotin carboxylase
FY132_05075	COG0511	ligase activity, forming carbon-carbon bonds
FY132_05080	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FY132_05090	COG0436	Aminotransferase
FY132_05110	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_05115	COG1530	ribonuclease E activity
FY132_05125	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY132_05145	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FY132_05150	COG0384	phenazine biosynthesis protein PhzF
FY132_05170	COG0633	Ferredoxin
FY132_05185	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FY132_05190	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FY132_05200	COG3768	UPF0283 membrane protein
FY132_05205	COG3106	COG3106 Predicted ATPase
FY132_05235	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FY132_05270	COG0537	adenosine 5'-monophosphoramidase activity
FY132_05295	COG0052	Belongs to the universal ribosomal protein uS2 family
FY132_05300	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FY132_05305	COG0528	UMP kinase activity
FY132_05310	COG0233	cytoplasmic translational termination
FY132_05315	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FY132_05325	COG0750	zinc metalloprotease
FY132_05330	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FY132_05335	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY132_05340	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY132_05345	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY132_05350	COG3494	Protein of unknown function (DUF1009)
FY132_05355	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FY132_05360	COG2186	Transcriptional regulator
FY132_05370	COG0765	amino acid transport
FY132_05375	COG0765	amino acid transport
FY132_05385	COG0372	Belongs to the citrate synthase family
FY132_05400	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FY132_05425	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FY132_05430	COG1459	type II secretion system
FY132_05485	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FY132_05490	COG0148	phosphopyruvate hydratase activity
FY132_05500	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FY132_05505	COG0022	dehydrogenase e1 component
FY132_05505	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY132_05510	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY132_05520	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FY132_05530	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FY132_05535	COG0697	spore germination
FY132_05550	COG2867	negative regulation of translational initiation
FY132_05555	COG1546	Belongs to the CinA family
FY132_05560	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FY132_05560	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FY132_05570	COG3852	Histidine kinase
FY132_05575	COG2204	response regulator
FY132_05580	COG5000	phosphorelay sensor kinase activity
FY132_05585	COG2204	response regulator
FY132_05590	COG0569	domain protein
FY132_05595	COG1923	regulation of RNA biosynthetic process
FY132_05600	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FY132_05605	COG3956	TIGRFAM MazG family protein
FY132_05615	COG1648	precorrin-2 dehydrogenase activity
FY132_05615	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY132_05655	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FY132_05655	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FY132_05660	COG0509	glycine decarboxylation via glycine cleavage system
FY132_05665	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY132_05690	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FY132_05695	COG0564	pseudouridine synthase activity
FY132_05715	COG0251	oxidation-reduction process
FY132_05720	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FY132_05730	COG1671	Belongs to the UPF0178 family
FY132_05745	COG0450	alkyl hydroperoxide reductase
FY132_05750	COG0625	glutathione transferase activity
FY132_05760	COG2801	Transposase and inactivated derivatives
FY132_05765	COG0431	NADPH-dependent FMN reductase
FY132_05775	COG0798	PFAM Bile acid sodium symporter
FY132_05780	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FY132_05795	COG0321	lipoyl(octanoyl) transferase activity
FY132_05795	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FY132_05800	COG0084	hydrolase, TatD family'
FY132_05805	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY132_05815	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FY132_05860	COG4626	Terminase
FY132_05860	COG1802	Transcriptional regulator
FY132_05935	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FY132_05940	COG2095	MarC family integral membrane protein
FY132_05945	COG0617	tRNA 3'-terminal CCA addition
FY132_05945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FY132_05945	COG0517	IMP dehydrogenase activity
FY132_05955	COG0629	single-stranded DNA binding
FY132_05960	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FY132_05970	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FY132_05990	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY132_05995	COG1121	(ABC) transporter
FY132_06015	COG0667	Aldo Keto reductase
FY132_06025	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FY132_06110	COG2239	Acts as a magnesium transporter
FY132_06115	COG0243	molybdopterin cofactor binding
FY132_06125	COG0242	peptide deformylase activity
FY132_06135	COG2202	Pas domain
FY132_06135	COG2205	protein histidine kinase activity
FY132_06145	COG0321	lipoyl(octanoyl) transferase activity
FY132_06150	COG1064	alcohol dehydrogenase
FY132_06180	COG1862	Preprotein translocase
FY132_06200	COG2124	cytochrome p450
FY132_06215	COG0596	Alpha beta hydrolase
FY132_06225	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY132_06230	COG0626	cystathionine gamma-synthase activity
FY132_06235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_06240	COG4597	amino acid ABC transporter
FY132_06245	COG0765	amino acid transport
FY132_06250	COG1126	abc transporter atp-binding protein
FY132_06265	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FY132_06280	COG0436	Aminotransferase
FY132_06310	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY132_06320	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY132_06325	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY132_06330	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FY132_06345	COG3243	poly(R)-hydroxyalkanoic acid synthase
FY132_06350	COG1489	DNA binding
FY132_06355	COG0024	Methionine aminopeptidase
FY132_06360	COG2003	Belongs to the UPF0758 family
FY132_06375	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
FY132_06400	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FY132_06405	COG0546	phosphoglycolate phosphatase activity
FY132_06415	COG0114	fumarate hydratase activity
FY132_06425	COG0504	CTP synthase activity
FY132_06435	COG0149	triose-phosphate isomerase activity
FY132_06445	COG0187	DNA topoisomerase II activity
FY132_06455	COG0740	serine-type endopeptidase activity
FY132_06465	COG0640	Transcriptional regulator
FY132_06470	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY132_06475	COG0745	RESPONSE REGULATOR receiver
FY132_06490	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FY132_06490	COG3264	Mechanosensitive ion channel
FY132_06555	COG1127	ABC transporter
FY132_06560	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FY132_06565	COG4948	Mandelate Racemase Muconate Lactonizing
FY132_06575	COG0280	phosphate acetyltransferase
FY132_06575	COG0281	malic enzyme
FY132_06585	COG0778	Nitroreductase
FY132_06590	COG0823	Involved in the tonB-independent uptake of proteins
FY132_06605	COG1368	sulfuric ester hydrolase activity
FY132_06630	COG0544	peptidyl-prolyl cis-trans isomerase activity
FY132_06650	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
FY132_06670	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FY132_06685	COG0318	PFAM AMP-dependent synthetase and ligase
FY132_06695	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FY132_06695	COG0512	Glutamine amidotransferase of anthranilate synthase
FY132_06700	COG0343	queuine tRNA-ribosyltransferase activity
FY132_06705	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FY132_06720	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FY132_06735	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY132_06740	COG0134	indole-3-glycerol-phosphate synthase activity
FY132_06745	COG0315	cyclic pyranopterin monophosphate synthase activity
FY132_06750	COG0303	'Molybdopterin
FY132_06755	COG3706	GGDEF domain
FY132_06765	COG0475	glutathione-regulated potassium exporter activity
FY132_06765	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FY132_06775	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FY132_06785	COG2814	Major facilitator Superfamily
FY132_06790	COG0746	molybdenum cofactor guanylyltransferase activity
FY132_06795	COG1763	Mo-molybdopterin cofactor biosynthetic process
FY132_06800	COG0739	heme binding
FY132_06805	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FY132_06810	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FY132_06815	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FY132_06820	COG0805	protein transport
FY132_06825	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FY132_06830	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FY132_06835	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FY132_06840	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FY132_06845	COG1472	Belongs to the glycosyl hydrolase 3 family
FY132_06855	COG0018	arginyl-trna synthetase
FY132_06860	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FY132_06885	COG0525	valine-tRNA ligase activity
FY132_06895	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FY132_07035	COG1525	nuclease
FY132_07110	COG3567	Phage-associated protein, HI1409 family
FY132_07160	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FY132_07345	COG0655	NAD(P)H dehydrogenase (quinone) activity
FY132_07350	COG1058	Belongs to the CinA family
FY132_07350	COG1546	Belongs to the CinA family
FY132_07355	COG0589	response to stress
FY132_07360	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FY132_07370	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FY132_07380	COG0640	Transcriptional regulator
FY132_07385	COG1914	H( )-stimulated, divalent metal cation uptake system
FY132_07395	COG1132	(ABC) transporter
FY132_07400	COG0628	permease
FY132_07435	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FY132_07445	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FY132_07455	COG0302	gtp cyclohydrolase
FY132_07460	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FY132_07465	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY132_07475	COG0516	GMP reductase activity
FY132_07475	COG0517	IMP dehydrogenase activity
FY132_07510	COG1760	l-serine dehydratase
FY132_07550	COG0583	DNA-binding transcription factor activity
FY132_07565	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FY132_07565	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FY132_07575	COG0347	Belongs to the P(II) protein family
FY132_07580	COG0174	glutamine synthetase
FY132_07610	COG0697	spore germination
FY132_07620	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FY132_07630	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FY132_07660	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FY132_07670	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FY132_07675	COG2186	Transcriptional regulator
FY132_07685	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY132_07690	COG4603	Belongs to the binding-protein-dependent transport system permease family
FY132_07695	COG3845	ABC transporter
FY132_07700	COG1183	phosphatidylcholine synthase activity
FY132_07705	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY132_07710	COG0679	Auxin Efflux Carrier
FY132_07715	COG0785	Cytochrome C biogenesis protein
FY132_07735	COG1278	Cold shock
FY132_07785	COG0577	efflux transmembrane transporter activity
FY132_07785	COG1136	(ABC) transporter
FY132_07790	COG1136	(ABC) transporter
FY132_07790	COG0577	efflux transmembrane transporter activity
FY132_07815	COG2151	metal-sulfur cluster biosynthetic enzyme
FY132_07820	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FY132_07825	COG0719	Fe-S assembly protein
FY132_07830	COG0396	ATPase activity
FY132_07835	COG0719	Fe-S assembly protein
FY132_07840	COG1104	cysteine desulfurase activity
FY132_07845	COG2945	thiolester hydrolase activity
FY132_07850	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FY132_07855	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FY132_07865	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FY132_07870	COG2833	Protein of unknown function (DUF455)
FY132_07875	COG0739	heme binding
FY132_07880	COG0513	Belongs to the DEAD box helicase family
FY132_07905	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FY132_07915	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FY132_07920	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FY132_07925	COG0047	phosphoribosylformylglycinamidine synthase activity
FY132_07940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY132_07945	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FY132_07965	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FY132_07970	COG2814	Major facilitator Superfamily
FY132_07975	COG0483	inositol monophosphate 1-phosphatase activity
FY132_07980	COG0483	inositol monophosphate 1-phosphatase activity
FY132_07985	COG0037	tRNA processing
FY132_07990	COG2066	Belongs to the glutaminase family
FY132_07995	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FY132_08000	COG0861	Integral membrane protein TerC family
FY132_08015	COG1280	lysine exporter protein (LysE YggA)
FY132_08025	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FY132_08030	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
FY132_08040	COG0538	isocitrate dehydrogenase activity
FY132_08050	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FY132_08055	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FY132_08060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_08065	COG2313	pseudouridylate synthase activity
FY132_08075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_08080	COG4215	(ABC) transporter
FY132_08090	COG5425	PFAM Usg family protein
FY132_08100	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY132_08105	COG1522	sequence-specific DNA binding
FY132_08110	COG1573	uracil-dna glycosylase
FY132_08120	COG2205	protein histidine kinase activity
FY132_08120	COG2202	Pas domain
FY132_08125	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FY132_08130	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FY132_08135	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FY132_08150	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FY132_08155	COG0842	Transport permease protein
FY132_08160	COG1131	(ABC) transporter
FY132_08165	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY132_08165	COG0730	response to heat
FY132_08185	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FY132_08190	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FY132_08210	COG0129	dihydroxy-acid dehydratase activity
FY132_08215	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FY132_08220	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FY132_08230	COG3739	integral membrane protein
FY132_08235	COG0203	ribosomal protein L17
FY132_08240	COG0202	RNA polymerase activity
FY132_08245	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FY132_08250	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FY132_08255	COG0563	adenylate kinase activity
FY132_08260	COG0201	protein transport
FY132_08265	COG0200	Binds to the 23S rRNA
FY132_08270	COG1841	ribosomal large subunit assembly
FY132_08275	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FY132_08280	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FY132_08285	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FY132_08290	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FY132_08295	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FY132_08300	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FY132_08305	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FY132_08310	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FY132_08315	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FY132_08320	COG0255	Belongs to the universal ribosomal protein uL29 family
FY132_08325	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FY132_08330	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FY132_08335	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FY132_08340	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FY132_08345	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FY132_08350	COG0089	rRNA binding
FY132_08355	COG0088	Forms part of the polypeptide exit tunnel
FY132_08360	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FY132_08365	COG0051	transcription antitermination factor activity, RNA binding
FY132_08370	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FY132_08375	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FY132_08380	COG0049	tRNA binding
FY132_08385	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FY132_08405	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FY132_08410	COG0085	RNA polymerase activity
FY132_08415	COG0222	ribosome binding
FY132_08420	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FY132_08425	COG0081	regulation of translation
FY132_08430	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FY132_08440	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FY132_08450	COG1086	Polysaccharide biosynthesis protein
FY132_08455	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FY132_08460	COG0861	Integral membrane protein TerC family
FY132_08465	COG3895	Periplasmic Protein
FY132_08485	COG1132	(ABC) transporter
FY132_08490	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY132_08510	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FY132_08545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_08545	COG2198	Histidine kinase
FY132_08545	COG2205	protein histidine kinase activity
FY132_08545	COG0784	Response regulator, receiver
FY132_08550	COG0784	Response regulator, receiver
FY132_08555	COG2202	Pas domain
FY132_08555	COG3920	Histidine kinase
FY132_08560	COG0784	Response regulator, receiver
FY132_08565	COG4251	negative regulation of phosphorylation
FY132_08580	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FY132_08585	COG1607	acyl-coa hydrolase
FY132_08605	COG2910	NAD(P)H-binding
FY132_08610	COG1733	regulation of RNA biosynthetic process
FY132_08625	COG0556	nucleotide-excision repair
FY132_08635	COG2382	esterase
FY132_08655	COG0484	heat shock protein binding
FY132_08675	COG3706	GGDEF domain
FY132_08695	COG1840	ABC-type Fe3 transport system, periplasmic component
FY132_08700	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY132_08715	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FY132_08725	COG2207	Transcriptional regulator
FY132_08730	COG1064	alcohol dehydrogenase
FY132_08735	COG1252	NADH dehydrogenase
FY132_08740	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FY132_08745	COG2197	response regulator
FY132_08750	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FY132_08785	COG0656	L-ascorbic acid biosynthetic process
FY132_08800	COG0440	acetolactate synthase activity
FY132_08805	COG0028	Belongs to the TPP enzyme family
FY132_08815	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FY132_08820	COG3830	Belongs to the UPF0237 family
FY132_08820	COG0560	Phosphoserine phosphatase
FY132_08840	COG0330	HflC and HflK could
FY132_08845	COG0330	HflC and HflK could
FY132_08855	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FY132_08890	COG0277	FAD linked oxidase domain protein
FY132_08895	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY132_08935	COG1335	isochorismatase
FY132_08960	COG2264	protein methyltransferase activity
FY132_08965	COG1999	signal sequence binding
FY132_08975	COG0835	chemotaxis
FY132_08985	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FY132_08990	COG0583	DNA-binding transcription factor activity
FY132_09000	COG1247	-acetyltransferase
FY132_09010	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FY132_09015	COG0497	DNA recombination
FY132_09020	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FY132_09030	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY132_09035	COG0849	cell division
FY132_09040	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FY132_09045	COG1181	Belongs to the D-alanine--D-alanine ligase family
FY132_09050	COG0477	Major facilitator Superfamily
FY132_09055	COG5001	Diguanylate cyclase
FY132_09060	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FY132_09065	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FY132_09070	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FY132_09080	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FY132_09085	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FY132_09095	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FY132_09110	COG0275	rRNA processing
FY132_09115	COG2001	Belongs to the MraZ family
FY132_09140	COG3023	N-Acetylmuramoyl-L-alanine amidase
FY132_09170	COG4106	trans-aconitate 2-methyltransferase activity
FY132_09190	COG2226	methyltransferase
FY132_09200	COG2267	carboxylic ester hydrolase activity
FY132_09205	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FY132_09220	COG0251	oxidation-reduction process
FY132_09235	COG1376	ErfK ybiS ycfS ynhG family protein
FY132_09240	COG2814	Major facilitator Superfamily
FY132_09270	COG1012	belongs to the aldehyde dehydrogenase family
FY132_09275	COG0174	glutamine synthetase
FY132_09280	COG0531	amino acid
FY132_09290	COG1737	Transcriptional regulator
FY132_09295	COG2182	Extracellular solute-binding protein
FY132_09310	COG3842	ATPase activity
FY132_09370	COG2968	Membrane
FY132_09380	COG0432	Pfam Uncharacterised protein family UPF0047
FY132_09395	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FY132_09400	COG0358	DNA primase activity
FY132_09420	COG0505	Belongs to the CarA family
FY132_09425	COG0534	Mate efflux family protein
FY132_09440	COG2321	neutral zinc metallopeptidase
FY132_09455	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FY132_09465	COG3706	GGDEF domain
FY132_09480	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY132_09490	COG1522	sequence-specific DNA binding
FY132_09495	COG0492	ferredoxin-NADP+ reductase activity
FY132_09500	COG0583	DNA-binding transcription factor activity
FY132_09510	COG1902	pentaerythritol trinitrate reductase activity
FY132_09535	COG0387	Pfam Sodium calcium exchanger
FY132_09540	COG0436	Aminotransferase
FY132_09545	COG2199	diguanylate cyclase activity
FY132_09545	COG2200	EAL domain
FY132_09560	COG1278	Cold shock
FY132_09565	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY132_09575	COG1846	Transcriptional regulator
FY132_09580	COG0745	RESPONSE REGULATOR receiver
FY132_09590	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY132_09610	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FY132_09620	COG1496	oxidoreductase activity
FY132_09635	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FY132_09645	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FY132_09660	COG0840	transmembrane signaling receptor activity
FY132_09665	COG1012	belongs to the aldehyde dehydrogenase family
FY132_09670	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FY132_09675	COG5001	Diguanylate cyclase
FY132_09675	COG3300	MHYT domain
FY132_09680	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FY132_09685	COG5001	Diguanylate cyclase
FY132_09695	COG0193	aminoacyl-tRNA hydrolase activity
FY132_09705	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FY132_09730	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FY132_09740	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FY132_09740	COG2857	Cytochrome c1
FY132_09760	COG1132	(ABC) transporter
FY132_09770	COG1132	(ABC) transporter
FY132_09780	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FY132_09795	COG0408	coproporphyrinogen oxidase activity
FY132_09810	COG0617	tRNA 3'-terminal CCA addition
FY132_09825	COG0714	Associated with various cellular activities
FY132_09845	COG0454	-acetyltransferase
FY132_09860	COG0477	Major facilitator Superfamily
FY132_09870	COG0435	Glutathione S-transferase
FY132_09875	COG0494	nUDIX hydrolase
FY132_09885	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FY132_09890	COG3135	benzoate transporter
FY132_09915	COG0740	serine-type endopeptidase activity
FY132_09930	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FY132_09935	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FY132_09960	COG4175	Glycine betaine
FY132_09980	COG1435	thymidine kinase activity
FY132_10005	COG1629	transport
FY132_10005	COG4771	TonB-dependent receptor
FY132_10015	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FY132_10015	COG0512	Glutamine amidotransferase of anthranilate synthase
FY132_10030	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY132_10040	COG0366	Alpha amylase catalytic
FY132_10045	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_10065	COG1160	GTP binding
FY132_10085	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
FY132_10095	COG0024	Methionine aminopeptidase
FY132_10105	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_10125	COG0583	DNA-binding transcription factor activity
FY132_10140	COG0402	S-adenosylhomocysteine deaminase activity
FY132_10150	COG1304	FMN binding
FY132_10160	COG1309	transcriptional regulator
FY132_10165	COG1686	Belongs to the peptidase S11 family
FY132_10175	COG2351	hydroxyisourate hydrolase activity
FY132_10180	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FY132_10205	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY132_10215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_10215	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FY132_10225	COG0513	Belongs to the DEAD box helicase family
FY132_10235	COG2259	Doxx family
FY132_10240	COG1376	ErfK ybiS ycfS ynhG family protein
FY132_10250	COG2308	Evidence 4 Homologs of previously reported genes of
FY132_10260	COG1305	Transglutaminase-like
FY132_10285	COG4214	carbohydrate transport
FY132_10295	COG4213	ABC transporter substrate-binding protein
FY132_10350	COG2948	multi-organism process
FY132_10360	COG3701	Conjugal transfer protein
FY132_10365	COG3846	protein secretion by the type IV secretion system
FY132_10380	COG3451	type IV secretory pathway VirB4
FY132_10395	COG4962	Type ii secretion system protein e
FY132_10420	COG0583	DNA-binding transcription factor activity
FY132_10430	COG1566	PFAM secretion protein HlyD family protein
FY132_10445	COG2207	Transcriptional regulator
FY132_10450	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_10460	COG0583	DNA-binding transcription factor activity
FY132_10470	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FY132_10485	COG0583	DNA-binding transcription factor activity
FY132_10495	COG0741	lytic transglycosylase activity
FY132_10520	COG1192	Involved in chromosome partitioning
FY132_10555	COG2814	Major facilitator Superfamily
FY132_10565	COG5489	Protein of unknown function (DUF736)
FY132_10580	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FY132_10610	COG1204	response to ionizing radiation
FY132_10625	COG0514	ATP-dependent DNA helicase (RecQ)
FY132_10675	COG0583	DNA-binding transcription factor activity
FY132_10680	COG1902	pentaerythritol trinitrate reductase activity
FY132_10685	COG0583	DNA-binding transcription factor activity
FY132_10700	COG1335	isochorismatase
FY132_10705	COG0583	DNA-binding transcription factor activity
FY132_10710	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY132_10720	COG4584	PFAM Integrase catalytic
FY132_10735	COG0840	transmembrane signaling receptor activity
FY132_10750	COG0646	methionine synthase
FY132_10750	COG1410	methionine synthase
FY132_10765	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_10795	COG1215	transferase activity, transferring glycosyl groups
FY132_10825	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FY132_10840	COG2346	COG2346, Truncated hemoglobins
FY132_10860	COG1309	transcriptional regulator
FY132_10875	COG0494	nUDIX hydrolase
FY132_10885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_10890	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_10920	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
FY132_10925	COG0830	nickel cation binding
FY132_10930	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
FY132_10945	COG0804	urea catabolic process
FY132_10950	COG1442	glycosyl transferase family 8
FY132_10955	COG3755	Protein conserved in bacteria
FY132_10965	COG0832	Belongs to the urease beta subunit family
FY132_10970	COG3813	Protein conserved in bacteria
FY132_10975	COG0831	urea catabolic process
FY132_10980	COG0829	nickel cation binding
FY132_11010	COG0559	Belongs to the binding-protein-dependent transport system permease family
FY132_11025	COG0174	glutamine synthetase
FY132_11030	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_11035	COG5002	protein histidine kinase activity
FY132_11035	COG0784	Response regulator, receiver
FY132_11035	COG2198	Histidine kinase
FY132_11050	COG0726	polysaccharide deacetylase
FY132_11085	COG1218	3'(2'),5'-bisphosphate nucleotidase
FY132_11160	COG0564	pseudouridine synthase activity
FY132_11170	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FY132_11180	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FY132_11205	COG0346	lactoylglutathione lyase activity
FY132_11215	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FY132_11225	COG2832	Protein of unknown function (DUF454)
FY132_11230	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FY132_11235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_11240	COG4558	Periplasmic binding protein
FY132_11250	COG3721	Heme iron utilization protein
FY132_11265	COG3655	Transcriptional regulator
FY132_11290	COG2205	protein histidine kinase activity
FY132_11330	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_11335	COG4605	iron ion homeostasis
FY132_11340	COG4604	ABC transporter, ATP-binding protein
FY132_11345	COG0783	Belongs to the Dps family
FY132_11360	COG2972	Histidine kinase
FY132_11360	COG0840	transmembrane signaling receptor activity
FY132_11365	COG0656	L-ascorbic acid biosynthetic process
FY132_11370	COG2814	Major facilitator Superfamily
FY132_11380	COG0583	DNA-binding transcription factor activity
FY132_11385	COG0657	acetylesterase activity
FY132_11390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_11410	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY132_11415	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FY132_11420	COG0288	reversible hydration of carbon dioxide
FY132_11430	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FY132_11450	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FY132_11455	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY132_11460	COG0778	Nitroreductase
FY132_11465	COG2267	carboxylic ester hydrolase activity
FY132_11470	COG0251	oxidation-reduction process
FY132_11475	COG1335	isochorismatase
FY132_11480	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_11490	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_11505	COG1175	transmembrane transport
FY132_11510	COG0395	ABC-type sugar transport system, permease component
FY132_11515	COG3842	ATPase activity
FY132_11520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_11530	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY132_11545	COG4608	Belongs to the ABC transporter superfamily
FY132_11550	COG0444	Belongs to the ABC transporter superfamily
FY132_11555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_11560	COG0601	transmembrane transport
FY132_11615	COG2159	amidohydrolase
FY132_11620	COG1960	acyl-CoA dehydrogenase activity
FY132_11650	COG0745	RESPONSE REGULATOR receiver
FY132_11660	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY132_11660	COG1902	pentaerythritol trinitrate reductase activity
FY132_11665	COG3842	ATPase activity
FY132_11675	COG1840	ABC-type Fe3 transport system, periplasmic component
FY132_11680	COG1840	ABC-type Fe3 transport system, periplasmic component
FY132_11685	COG0745	RESPONSE REGULATOR receiver
FY132_11695	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FY132_11700	COG0583	DNA-binding transcription factor activity
FY132_11705	COG1278	Cold shock
FY132_11745	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FY132_11750	COG1309	transcriptional regulator
FY132_11755	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_11760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY132_11770	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FY132_11775	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FY132_11795	COG0583	DNA-binding transcription factor activity
FY132_11800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_11805	COG0725	ABC transporter, periplasmic molybdate-binding protein
FY132_11810	COG4149	molybdate abc transporter
FY132_11815	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FY132_11830	COG2022	thiamine diphosphate biosynthetic process
FY132_11845	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FY132_11855	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY132_11865	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FY132_11885	COG1132	(ABC) transporter
FY132_11890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FY132_11935	COG4166	transmembrane transport
FY132_11940	COG0601	transmembrane transport
FY132_11945	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_11960	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FY132_11965	COG3142	Participates in the control of copper homeostasis
FY132_11970	COG2814	Major facilitator Superfamily
FY132_11985	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_11990	COG1737	Transcriptional regulator
FY132_12000	COG3842	ATPase activity
FY132_12010	COG0395	ABC-type sugar transport system, permease component
FY132_12030	COG2188	Transcriptional regulator
FY132_12035	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FY132_12040	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FY132_12045	COG1940	carbohydrate kinase activity
FY132_12055	COG0671	phosphoesterase, PA-phosphatase related
FY132_12060	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FY132_12065	COG0156	8-amino-7-oxononanoate synthase activity
FY132_12075	COG0729	surface antigen
FY132_12085	COG0835	chemotaxis
FY132_12095	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FY132_12100	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FY132_12105	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FY132_12110	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FY132_12115	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FY132_12120	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FY132_12135	COG4974	Belongs to the 'phage' integrase family
FY132_12160	COG1280	lysine exporter protein (LysE YggA)
FY132_12170	COG0508	dehydrogenase complex catalyzes the overall conversion of
FY132_12175	COG0567	Dehydrogenase, E1 component
FY132_12180	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FY132_12185	COG0045	succinate-CoA ligase (ADP-forming) activity
FY132_12190	COG0039	L-malate dehydrogenase activity
FY132_12195	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FY132_12245	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FY132_12250	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FY132_12255	COG0181	hydroxymethylbilane synthase activity
FY132_12295	COG1872	DUF167
FY132_12300	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FY132_12310	COG1217	gtp-binding protein TYPA
FY132_12315	COG0339	signal peptide processing
FY132_12320	COG1846	Transcriptional regulator
FY132_12330	COG0137	argininosuccinate synthase activity
FY132_12340	COG1280	lysine exporter protein (LysE YggA)
FY132_12345	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FY132_12350	COG4120	Belongs to the binding-protein-dependent transport system permease family
FY132_12360	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FY132_12375	COG2154	pterin-4-alpha-carbinolamine dehydratase
FY132_12380	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FY132_12385	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
FY132_12395	COG4181	ATPase activity
FY132_12405	COG0670	Belongs to the BI1 family
FY132_12420	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FY132_12425	COG4133	protoheme IX ABC transporter activity
FY132_12430	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FY132_12435	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FY132_12460	COG2917	probably involved in intracellular septation
FY132_12465	COG0552	protein localization to endoplasmic reticulum
FY132_12470	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FY132_12475	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FY132_12490	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FY132_12495	COG0287	Prephenate dehydrogenase
FY132_12495	COG1605	Chorismate mutase
FY132_12500	COG0228	four-way junction DNA binding
FY132_12505	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FY132_12510	COG0336	Belongs to the RNA methyltransferase TrmD family
FY132_12520	COG0335	large ribosomal subunit rRNA binding
FY132_12525	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY132_12530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_12545	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FY132_12565	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FY132_12585	COG0488	(ABC) transporter
FY132_12595	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FY132_12605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FY132_12610	COG0142	geranyltranstransferase activity
FY132_12615	COG2885	chlorophyll binding
FY132_12620	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FY132_12625	COG2223	nitrite transmembrane transporter activity
FY132_12630	COG1349	DNA-binding transcription factor activity
FY132_12635	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FY132_12640	COG2197	response regulator
FY132_12645	COG1132	(ABC) transporter
FY132_12655	COG3459	Glycosyltransferase 36 associated
FY132_12660	COG1473	amidohydrolase
FY132_12665	COG0579	oxidoreductase
FY132_12675	COG0129	dihydroxy-acid dehydratase activity
FY132_12680	COG2084	Dehydrogenase
FY132_12685	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY132_12690	COG0277	FAD linked oxidase domain protein
FY132_12695	COG2186	Transcriptional regulator
FY132_12705	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY132_12710	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY132_12715	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY132_12720	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FY132_12730	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FY132_12735	COG0495	leucyl-tRNA aminoacylation
FY132_12750	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FY132_12755	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FY132_12770	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY132_12775	COG1946	Acyl-CoA thioesterase
FY132_12780	COG0347	Belongs to the P(II) protein family
FY132_12785	COG0004	ammonium transporteR
FY132_12790	COG1674	ftsk spoiiie
FY132_12795	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FY132_12810	COG0745	RESPONSE REGULATOR receiver
FY132_12820	COG1329	Transcriptional regulator
FY132_12830	COG2270	Major facilitator Superfamily
FY132_12845	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_12860	COG0494	nUDIX hydrolase
FY132_12865	COG2861	carbohydrate metabolic process
FY132_12870	COG0793	Belongs to the peptidase S41A family
FY132_12880	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FY132_12885	COG0799	negative regulation of ribosome biogenesis
FY132_12890	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FY132_12895	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FY132_12900	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FY132_12905	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FY132_12920	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FY132_12925	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FY132_12950	COG0066	3-isopropylmalate dehydratase activity
FY132_12955	COG0473	3-isopropylmalate dehydrogenase activity
FY132_12960	COG1858	cytochrome C peroxidase
FY132_12965	COG1797	cobyrinic acid a,c-diamide synthase activity
FY132_12975	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
FY132_13040	COG1492	cobalamin metabolic process
FY132_13055	COG4948	Mandelate Racemase Muconate Lactonizing
FY132_13060	COG3254	rhamnose metabolic process
FY132_13065	COG0246	Mannitol dehydrogenase
FY132_13070	COG1063	alcohol dehydrogenase
FY132_13095	COG1129	ABC transporter
FY132_13100	COG2186	Transcriptional regulator
FY132_13105	COG2721	sulfolactate sulfo-lyase activity
FY132_13110	COG0138	bifunctional purine biosynthesis protein purh
FY132_13120	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FY132_13120	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FY132_13125	COG0501	Belongs to the peptidase M48B family
FY132_13145	COG0357	Ribosomal RNA small subunit methyltransferase G
FY132_13150	COG0445	tRNA wobble uridine modification
FY132_13155	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FY132_13160	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FY132_13165	COG1981	membrane
FY132_13170	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FY132_13175	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FY132_13180	COG0424	maF-like protein
FY132_13185	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FY132_13190	COG0237	dephospho-CoA kinase activity
FY132_13200	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FY132_13205	COG3030	protein affecting phage T7 exclusion by the F plasmid
FY132_13215	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FY132_13240	COG0179	Fumarylacetoacetate (FAA) hydrolase
FY132_13255	COG0135	phosphoribosylanthranilate isomerase activity
FY132_13260	COG0133	tryptophan synthase activity
FY132_13265	COG0159	tryptophan synthase activity
FY132_13270	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FY132_13285	COG1074	ATP-dependent DNA helicase activity
FY132_13295	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FY132_13300	COG0802	atpase or kinase
FY132_13305	COG2205	protein histidine kinase activity
FY132_13310	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FY132_13315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY132_13320	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FY132_13320	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FY132_13325	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FY132_13330	COG0642	Histidine kinase
FY132_13335	COG0745	RESPONSE REGULATOR receiver
FY132_13340	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FY132_13350	COG1652	LysM domain
FY132_13355	COG1072	(Pantothenic acid kinase))
FY132_13360	COG0140	phosphoribosyl-ATP diphosphatase activity
FY132_13365	COG0107	imidazoleglycerol-phosphate synthase activity
FY132_13370	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FY132_13375	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FY132_13385	COG0131	Imidazoleglycerol-phosphate dehydratase
FY132_13390	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FY132_13395	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FY132_13405	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FY132_13420	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FY132_13430	COG1643	Atp-dependent helicase
FY132_13475	COG1940	carbohydrate kinase activity
FY132_13495	COG1072	(Pantothenic acid kinase))
FY132_13505	COG1780	Probably involved in ribonucleotide reductase function
FY132_13525	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FY132_13555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_13565	COG2813	Specifically methylates the guanine in position
FY132_13570	COG1185	polyribonucleotide nucleotidyltransferase activity
FY132_13575	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FY132_13580	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FY132_13585	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FY132_13590	COG3064	Membrane
FY132_13590	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FY132_13605	COG0779	Required for maturation of 30S ribosomal subunits
FY132_13610	COG2814	Major facilitator Superfamily
FY132_13620	COG2951	lytic endotransglycosylase activity
FY132_13625	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FY132_13635	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FY132_13640	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FY132_13655	COG2816	NAD+ diphosphatase activity
FY132_13660	COG1605	Chorismate mutase
FY132_13660	COG0077	Prephenate dehydratase
FY132_13665	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FY132_13670	COG3474	cytochrome
FY132_13680	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FY132_13685	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FY132_13690	COG1278	Cold shock
FY132_13695	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY132_13705	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FY132_13705	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FY132_13710	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FY132_13740	COG2900	Belongs to the SlyX family
FY132_13750	COG0484	heat shock protein binding
FY132_13755	COG0443	Heat shock 70 kDa protein
FY132_13770	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FY132_13775	COG1744	ABC transporter substrate-binding protein PnrA-like
FY132_13780	COG3845	ABC transporter
FY132_13785	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY132_13790	COG1079	Belongs to the binding-protein-dependent transport system permease family
FY132_13795	COG0295	cytidine deaminase activity
FY132_13800	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FY132_13805	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FY132_13810	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FY132_13820	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FY132_13825	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FY132_13830	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FY132_13840	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FY132_13845	COG1845	cytochrome c oxidase, subunit III
FY132_13850	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY132_13855	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FY132_13860	COG0477	Major facilitator Superfamily
FY132_13865	COG0069	glutamate synthase activity
FY132_13865	COG0070	glutamate synthase
FY132_13865	COG0067	glutamate synthase
FY132_13870	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FY132_13885	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FY132_13895	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FY132_13925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_13945	COG0848	biopolymer transport protein
FY132_13955	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY132_13970	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY132_13975	COG3454	Phosphonate metabolism
FY132_13980	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FY132_13985	COG3639	organic phosphonate transmembrane transporter activity
FY132_13990	COG3639	organic phosphonate transmembrane transporter activity
FY132_14000	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FY132_14010	COG4778	phosphonate C-P lyase system protein PhnL
FY132_14015	COG4107	phosphonate C-P lyase system protein PhnK
FY132_14020	COG3627	carbon phosphorus lyase activity
FY132_14025	COG3626	phosphonate metabolism
FY132_14030	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FY132_14035	COG3624	Phosphonate C-P lyase system protein PhnG
FY132_14040	COG2188	Transcriptional regulator
FY132_14045	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FY132_14050	COG0837	glucose binding
FY132_14055	COG1803	Methylglyoxal synthase
FY132_14060	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
FY132_14065	COG4166	transmembrane transport
FY132_14070	COG4174	ABC transporter (Permease)
FY132_14075	COG4239	(ABC) transporter, permease
FY132_14080	COG4172	Belongs to the ABC transporter superfamily
FY132_14085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_14090	COG0174	glutamine synthetase
FY132_14095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_14100	COG3265	gluconokinase activity
FY132_14105	COG1174	glycine betaine transport
FY132_14110	COG1125	glycine betaine transport
FY132_14115	COG1174	glycine betaine transport
FY132_14120	COG1732	Glycine betaine
FY132_14130	COG1959	2 iron, 2 sulfur cluster binding
FY132_14135	COG1840	ABC-type Fe3 transport system, periplasmic component
FY132_14145	COG4269	membrane
FY132_14160	COG0697	spore germination
FY132_14175	COG0791	NLP P60 protein
FY132_14185	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FY132_14190	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FY132_14225	COG4964	Belongs to the GSP D family
FY132_14270	COG3422	double-strand break repair
FY132_14275	COG3757	hydrolase, family 25
FY132_14280	COG0697	spore germination
FY132_14285	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY132_14300	COG0492	ferredoxin-NADP+ reductase activity
FY132_14315	COG0481	GTPase activity
FY132_14320	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY132_14335	COG1396	sequence-specific DNA binding
FY132_14350	COG1917	Cupin 2, conserved barrel domain protein
FY132_14350	COG2169	Transcriptional regulator
FY132_14355	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FY132_14380	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FY132_14385	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FY132_14390	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FY132_14400	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FY132_14405	COG0072	phenylalanine-tRNA ligase activity
FY132_14405	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FY132_14410	COG0667	Aldo Keto reductase
FY132_14430	COG4977	sequence-specific DNA binding
FY132_14455	COG1570	exodeoxyribonuclease VII activity
FY132_14460	COG4948	Mandelate Racemase Muconate Lactonizing
FY132_14470	COG1846	Transcriptional regulator
FY132_14480	COG2309	aminopeptidase activity
FY132_14490	COG1393	Belongs to the ArsC family
FY132_14505	COG1309	transcriptional regulator
FY132_14515	COG0519	Catalyzes the synthesis of GMP from XMP
FY132_14515	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FY132_14530	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
FY132_14560	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FY132_14570	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FY132_14580	COG1968	undecaprenyl-diphosphatase activity
FY132_14595	COG0284	orotidine-5'-phosphate decarboxylase activity
FY132_14605	COG3963	phosphatidate phosphatase activity
FY132_14615	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FY132_14620	COG0792	nuclease activity
FY132_14635	COG1175	transmembrane transport
FY132_14640	COG0395	ABC-type sugar transport system, permease component
FY132_14645	COG3842	ATPase activity
FY132_14655	COG0189	ligase activity
FY132_14665	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FY132_14670	COG1280	lysine exporter protein (LysE YggA)
FY132_14675	COG0756	dUTP diphosphatase activity
FY132_14680	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FY132_14685	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FY132_14700	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FY132_14705	COG2226	methyltransferase
FY132_14710	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FY132_14715	COG1024	Enoyl-CoA hydratase
FY132_14720	COG0268	Binds directly to 16S ribosomal RNA
FY132_14745	COG0640	Transcriptional regulator
FY132_14785	COG4178	(ABC) transporter
FY132_14810	COG1082	Xylose isomerase domain protein TIM barrel
FY132_14815	COG0572	uridine kinase
FY132_14825	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_14830	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_14835	COG1129	ABC transporter
FY132_14855	COG3284	Transcriptional regulator
FY132_14860	COG1063	alcohol dehydrogenase
FY132_14870	COG0110	maltose O-acetyltransferase activity
FY132_14875	COG1049	propionate catabolic process, 2-methylcitrate cycle
FY132_14900	COG0488	(ABC) transporter
FY132_14905	COG5265	(ABC) transporter
FY132_14910	COG3181	Tripartite tricarboxylate transporter family receptor
FY132_14915	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FY132_14925	COG3237	CsbD-like
FY132_14945	COG0395	ABC-type sugar transport system, permease component
FY132_14950	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY132_14960	COG0483	inositol monophosphate 1-phosphatase activity
FY132_14970	COG0405	Gamma-glutamyltransferase
FY132_14975	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_14980	COG0601	transmembrane transport
FY132_14985	COG0747	negative chemotaxis
FY132_14990	COG2186	Transcriptional regulator
FY132_15000	COG4948	Mandelate Racemase Muconate Lactonizing
FY132_15005	COG4172	Belongs to the ABC transporter superfamily
FY132_15010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_15015	COG0601	transmembrane transport
FY132_15020	COG0747	negative chemotaxis
FY132_15025	COG2186	Transcriptional regulator
FY132_15035	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_15040	COG2223	nitrite transmembrane transporter activity
FY132_15050	COG3383	formate dehydrogenase (NAD+) activity
FY132_15070	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY132_15085	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY132_15095	COG0765	amino acid transport
FY132_15100	COG0765	amino acid transport
FY132_15105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_15120	COG3938	Belongs to the proline racemase family
FY132_15130	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_15140	COG0765	amino acid transport
FY132_15155	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY132_15160	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_15170	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY132_15175	COG0784	Response regulator, receiver
FY132_15190	COG0842	Transport permease protein
FY132_15195	COG1129	ABC transporter
FY132_15195	COG0842	Transport permease protein
FY132_15200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_15205	COG1486	melibiose metabolic process
FY132_15210	COG4172	Belongs to the ABC transporter superfamily
FY132_15215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_15220	COG0601	transmembrane transport
FY132_15225	COG0747	negative chemotaxis
FY132_15230	COG1486	melibiose metabolic process
FY132_15255	COG1940	carbohydrate kinase activity
FY132_15260	COG2182	Extracellular solute-binding protein
FY132_15265	COG1175	transmembrane transport
FY132_15270	COG0395	ABC-type sugar transport system, permease component
FY132_15275	COG0165	Argininosuccinate lyase
FY132_15280	COG3842	ATPase activity
FY132_15285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_15290	COG3119	arylsulfatase activity
FY132_15300	COG0583	DNA-binding transcription factor activity
FY132_15305	COG1120	ATPase activity
FY132_15310	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_15315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_15325	COG4774	siderophore transport
FY132_15335	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FY132_15350	COG2205	protein histidine kinase activity
FY132_15355	COG0745	RESPONSE REGULATOR receiver
FY132_15360	COG1566	PFAM secretion protein HlyD family protein
FY132_15375	COG1392	Phosphate transport regulator
FY132_15380	COG0306	phosphate transporter
FY132_15385	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FY132_15395	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
FY132_15405	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_15410	COG5001	Diguanylate cyclase
FY132_15410	COG3300	MHYT domain
FY132_15430	COG2186	Transcriptional regulator
FY132_15435	COG0601	transmembrane transport
FY132_15440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_15445	COG0444	Belongs to the ABC transporter superfamily
FY132_15455	COG3842	ATPase activity
FY132_15460	COG0395	ABC-type sugar transport system, permease component
FY132_15475	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY132_15475	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY132_15480	COG1609	Transcriptional regulator
FY132_15490	COG0210	DNA helicase
FY132_15495	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
FY132_15500	COG1088	dTDP-glucose 4,6-dehydratase activity
FY132_15505	COG1091	dTDP-4-dehydrorhamnose reductase activity
FY132_15510	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
FY132_15525	COG3754	Rhamnan synthesis protein F
FY132_15530	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY132_15550	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FY132_15560	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FY132_15565	COG1216	Glycosyl transferase, family 2
FY132_15565	COG1442	glycosyl transferase family 8
FY132_15580	COG1132	(ABC) transporter
FY132_15590	COG0583	DNA-binding transcription factor activity
FY132_15595	COG0667	Aldo Keto reductase
FY132_15615	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FY132_15630	COG0300	oxidoreductase activity
FY132_15635	COG0584	glycerophosphoryl diester phosphodiesterase
FY132_15640	COG1940	carbohydrate kinase activity
FY132_15650	COG3712	iron ion homeostasis
FY132_15655	COG4774	siderophore transport
FY132_15660	COG2814	Major facilitator Superfamily
FY132_15680	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FY132_15690	COG3842	ATPase activity
FY132_15695	COG1175	transmembrane transport
FY132_15700	COG0395	ABC-type sugar transport system, permease component
FY132_15705	COG1609	Transcriptional regulator
FY132_15715	COG0673	inositol 2-dehydrogenase activity
FY132_15720	COG1082	Xylose isomerase domain protein TIM barrel
FY132_15735	COG1609	Transcriptional regulator
FY132_15740	COG0183	Belongs to the thiolase family
FY132_15745	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FY132_15755	COG1414	Transcriptional regulator
FY132_15770	COG0583	DNA-binding transcription factor activity
FY132_15780	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FY132_15785	COG3485	protocatechuate 3,4-dioxygenase
FY132_15790	COG3485	protocatechuate 3,4-dioxygenase
FY132_15795	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FY132_15800	COG0765	amino acid transport
FY132_15805	COG0765	amino acid transport
FY132_15810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_15815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_15820	COG1126	abc transporter atp-binding protein
FY132_15825	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FY132_15830	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FY132_15855	COG4172	Belongs to the ABC transporter superfamily
FY132_15860	COG0747	negative chemotaxis
FY132_15870	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_15885	COG0683	leucine binding
FY132_15900	COG0411	ABC transporter
FY132_15915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_15920	COG3962	Belongs to the TPP enzyme family
FY132_15930	COG3718	enzyme involved in inositol metabolism
FY132_15940	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY132_15945	COG1609	Transcriptional regulator
FY132_15950	COG1846	Transcriptional regulator
FY132_15960	COG0523	cobalamin synthesis protein
FY132_16000	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FY132_16020	COG0800	Aldolase
FY132_16025	COG2954	triphosphatase activity
FY132_16035	COG1054	Belongs to the UPF0176 family
FY132_16040	COG3300	MHYT domain
FY132_16040	COG5001	Diguanylate cyclase
FY132_16050	COG2011	ABC-type metal ion transport system permease component
FY132_16055	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FY132_16060	COG0778	Nitroreductase
FY132_16070	COG2115	Belongs to the xylose isomerase family
FY132_16075	COG1070	Carbohydrate kinase
FY132_16080	COG1609	Transcriptional regulator
FY132_16100	COG1309	transcriptional regulator
FY132_16105	COG1253	flavin adenine dinucleotide binding
FY132_16110	COG0471	metal ion transport
FY132_16110	COG3273	potassium ion transport
FY132_16115	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FY132_16120	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FY132_16125	COG1752	Esterase of the alpha-beta hydrolase superfamily
FY132_16135	COG0803	Belongs to the bacterial solute-binding protein 9 family
FY132_16140	COG1121	(ABC) transporter
FY132_16145	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY132_16150	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FY132_16160	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_16165	COG1414	Transcriptional regulator
FY132_16170	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FY132_16190	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FY132_16240	COG0395	ABC-type sugar transport system, permease component
FY132_16245	COG1175	transmembrane transport
FY132_16255	COG2390	Transcriptional regulator
FY132_16260	COG4172	Belongs to the ABC transporter superfamily
FY132_16265	COG1473	amidohydrolase
FY132_16275	COG0601	transmembrane transport
FY132_16280	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_16290	COG0693	protein deglycase activity
FY132_16295	COG0154	amidase activity
FY132_16300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_16310	COG0747	negative chemotaxis
FY132_16315	COG0583	DNA-binding transcription factor activity
FY132_16320	COG4608	Belongs to the ABC transporter superfamily
FY132_16325	COG0444	Belongs to the ABC transporter superfamily
FY132_16330	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_16335	COG0601	transmembrane transport
FY132_16340	COG0747	negative chemotaxis
FY132_16355	COG1473	amidohydrolase
FY132_16360	COG2814	Major facilitator Superfamily
FY132_16365	COG0583	DNA-binding transcription factor activity
FY132_16370	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FY132_16380	COG3842	ATPase activity
FY132_16390	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_16400	COG1609	Transcriptional regulator
FY132_16405	COG0583	DNA-binding transcription factor activity
FY132_16410	COG1960	acyl-CoA dehydrogenase activity
FY132_16415	COG4774	siderophore transport
FY132_16415	COG1629	transport
FY132_16425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_16435	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_16440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_16450	COG2375	cellular response to nickel ion
FY132_16460	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FY132_16465	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FY132_16465	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
FY132_16475	COG1169	isochorismate synthase
FY132_16480	COG1021	2,3-dihydroxybenzoate-AMP ligase
FY132_16485	COG3433	isochorismatase activity
FY132_16485	COG1535	isochorismatase
FY132_16490	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_16505	COG3005	denitrification pathway
FY132_16515	COG0243	molybdopterin cofactor binding
FY132_16530	COG4459	periplasmic nitrate reductase
FY132_16565	COG0826	peptidase U32
FY132_16575	COG3189	MarR family transcriptional regulator
FY132_16580	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FY132_16610	COG3256	nitric oxide reductase
FY132_16615	COG0714	Associated with various cellular activities
FY132_16675	COG0673	inositol 2-dehydrogenase activity
FY132_16685	COG1609	Transcriptional regulator
FY132_16690	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_16695	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_16700	COG1129	ABC transporter
FY132_16705	COG1879	ABC-type sugar transport system periplasmic component
FY132_16715	COG0583	DNA-binding transcription factor activity
FY132_16730	COG1609	Transcriptional regulator
FY132_16735	COG0673	inositol 2-dehydrogenase activity
FY132_16745	COG1653	transport
FY132_16750	COG1175	transmembrane transport
FY132_16755	COG0395	ABC-type sugar transport system, permease component
FY132_16760	COG3842	ATPase activity
FY132_16775	COG1253	flavin adenine dinucleotide binding
FY132_16800	COG3300	MHYT domain
FY132_16800	COG5001	Diguanylate cyclase
FY132_16930	COG0477	Major facilitator Superfamily
FY132_16950	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_16960	COG1879	ABC-type sugar transport system periplasmic component
FY132_16970	COG1063	alcohol dehydrogenase
FY132_16985	COG1136	(ABC) transporter
FY132_17000	COG1309	transcriptional regulator
FY132_17020	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FY132_17030	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY132_17030	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY132_17040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_17045	COG0047	phosphoribosylformylglycinamidine synthase activity
FY132_17055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_17060	COG1012	belongs to the aldehyde dehydrogenase family
FY132_17065	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_17075	COG3448	diguanylate cyclase activity
FY132_17075	COG4175	Glycine betaine
FY132_17085	COG4176	ABC-type proline glycine betaine transport system permease component
FY132_17090	COG3938	Belongs to the proline racemase family
FY132_17095	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FY132_17130	COG1733	regulation of RNA biosynthetic process
FY132_17180	COG0477	Major facilitator Superfamily
FY132_17190	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FY132_17195	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FY132_17210	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_17220	COG0395	ABC-type sugar transport system, permease component
FY132_17245	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_17250	COG1349	DNA-binding transcription factor activity
FY132_17255	COG1069	ribulokinase activity
FY132_17275	COG1940	carbohydrate kinase activity
FY132_17290	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_17295	COG1177	transmembrane transport
FY132_17305	COG3842	ATPase activity
FY132_17360	COG1136	(ABC) transporter
FY132_17360	COG0577	efflux transmembrane transporter activity
FY132_17385	COG1845	cytochrome c oxidase, subunit III
FY132_17390	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FY132_17395	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FY132_17400	COG3474	cytochrome
FY132_17430	COG3842	ATPase activity
FY132_17435	COG0395	ABC-type sugar transport system, permease component
FY132_17440	COG1175	transmembrane transport
FY132_17445	COG1653	transport
FY132_17450	COG1012	belongs to the aldehyde dehydrogenase family
FY132_17455	COG1024	Enoyl-CoA hydratase
FY132_17475	COG4702	Belongs to the UPF0303 family
FY132_17480	COG4774	siderophore transport
FY132_17480	COG1629	transport
FY132_17485	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FY132_17490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_17495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_17500	COG1120	ATPase activity
FY132_17515	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FY132_17525	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FY132_17530	COG1177	transmembrane transport
FY132_17535	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_17540	COG3842	ATPase activity
FY132_17565	COG1335	isochorismatase
FY132_17580	COG0583	DNA-binding transcription factor activity
FY132_17585	COG2318	DinB family
FY132_17610	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FY132_17640	COG0778	Nitroreductase
FY132_17660	COG0277	FAD linked oxidase domain protein
FY132_17680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_17685	COG4172	Belongs to the ABC transporter superfamily
FY132_17695	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_17705	COG0431	NADPH-dependent FMN reductase
FY132_17725	COG1522	sequence-specific DNA binding
FY132_17730	COG2376	Dihydroxyacetone kinase
FY132_17740	COG4221	oxidoreductase activity
FY132_17745	COG0625	glutathione transferase activity
FY132_17755	COG1566	PFAM secretion protein HlyD family protein
FY132_17765	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FY132_17770	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FY132_17785	COG0534	Mate efflux family protein
FY132_17820	COG1733	regulation of RNA biosynthetic process
FY132_17830	COG0577	efflux transmembrane transporter activity
FY132_17830	COG1136	(ABC) transporter
FY132_17835	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_17845	COG0745	RESPONSE REGULATOR receiver
FY132_17865	COG3209	COG3209 Rhs family protein
FY132_17895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_17920	COG3177	Filamentation induced by cAMP protein fic
FY132_17935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_17940	COG4597	amino acid ABC transporter
FY132_17945	COG0765	amino acid transport
FY132_17970	COG0747	negative chemotaxis
FY132_17975	COG0601	transmembrane transport
FY132_17980	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_17985	COG0444	Belongs to the ABC transporter superfamily
FY132_17990	COG4608	Belongs to the ABC transporter superfamily
FY132_18010	COG4213	ABC transporter substrate-binding protein
FY132_18015	COG1129	ABC transporter
FY132_18020	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_18035	COG0667	Aldo Keto reductase
FY132_18060	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_18065	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_18070	COG1129	ABC transporter
FY132_18080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_18090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_18100	COG0747	negative chemotaxis
FY132_18105	COG0747	negative chemotaxis
FY132_18110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_18120	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_18125	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_18130	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FY132_18140	COG0405	Gamma-glutamyltransferase
FY132_18170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_18175	COG0436	Aminotransferase
FY132_18190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_18195	COG0765	amino acid transport
FY132_18205	COG1126	abc transporter atp-binding protein
FY132_18215	COG2186	Transcriptional regulator
FY132_18235	COG1846	Transcriptional regulator
FY132_18240	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_18250	COG0583	DNA-binding transcription factor activity
FY132_18285	COG0583	DNA-binding transcription factor activity
FY132_18305	COG1280	lysine exporter protein (LysE YggA)
FY132_18310	COG3920	Histidine kinase
FY132_18335	COG0753	catalase activity
FY132_18355	COG1278	Cold shock
FY132_18395	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_18400	COG1902	pentaerythritol trinitrate reductase activity
FY132_18405	COG4221	oxidoreductase activity
FY132_18410	COG1309	transcriptional regulator
FY132_18425	COG1280	lysine exporter protein (LysE YggA)
FY132_18435	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FY132_18480	COG1196	nuclear chromosome segregation
FY132_18480	COG0741	lytic transglycosylase activity
FY132_18480	COG0739	heme binding
FY132_18485	COG0542	response to heat
FY132_18495	COG2890	protein-(glutamine-N5) methyltransferase activity
FY132_18500	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FY132_18510	COG0527	aspartate kinase activity
FY132_18525	COG0019	diaminopimelate decarboxylase activity
FY132_18540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FY132_18560	COG0784	Response regulator, receiver
FY132_18575	COG1522	sequence-specific DNA binding
FY132_18585	COG1116	anion transmembrane transporter activity
FY132_18590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_18595	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY132_18600	COG1012	belongs to the aldehyde dehydrogenase family
FY132_18605	COG0583	DNA-binding transcription factor activity
FY132_18610	COG0435	Glutathione S-transferase
FY132_18625	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
FY132_18630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY132_18635	COG0189	ligase activity
FY132_18655	COG0693	protein deglycase activity
FY132_18685	COG3685	Protein conserved in bacteria
FY132_18690	COG4993	Dehydrogenase
FY132_18705	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_18710	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FY132_18755	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_18770	COG0246	Mannitol dehydrogenase
FY132_18775	COG4608	Belongs to the ABC transporter superfamily
FY132_18780	COG0444	Belongs to the ABC transporter superfamily
FY132_18785	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_18790	COG0601	transmembrane transport
FY132_18795	COG0747	negative chemotaxis
FY132_18805	COG4221	oxidoreductase activity
FY132_18835	COG0539	negative regulation of cytoplasmic translation
FY132_18840	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FY132_18870	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FY132_18875	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FY132_18905	COG1294	oxidase, subunit
FY132_18915	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FY132_18920	COG4988	ABC transporter
FY132_18930	COG1063	alcohol dehydrogenase
FY132_18935	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_18940	COG2084	Dehydrogenase
FY132_18950	COG1522	sequence-specific DNA binding
FY132_18955	COG1794	racemase activity, acting on amino acids and derivatives
FY132_18970	COG0058	SHG alpha-glucan phosphorylase activity
FY132_18975	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FY132_18980	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FY132_18985	COG0297	glycogen (starch) synthase activity
FY132_18990	COG0033	Phosphoglucomutase
FY132_18995	COG1523	belongs to the glycosyl hydrolase 13 family
FY132_19025	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY132_19025	COG0446	pyridine nucleotide-disulphide oxidoreductase
FY132_19040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_19045	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY132_19065	COG1215	transferase activity, transferring glycosyl groups
FY132_19070	COG2327	Polysaccharide pyruvyl transferase
FY132_19075	COG0463	Glycosyl transferase, family 2
FY132_19080	COG2244	polysaccharide biosynthetic process
FY132_19085	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FY132_19090	COG2273	Hydrolase Family 16
FY132_19095	COG0438	transferase activity, transferring glycosyl groups
FY132_19100	COG1215	transferase activity, transferring glycosyl groups
FY132_19105	COG1215	transferase activity, transferring glycosyl groups
FY132_19110	COG1215	transferase activity, transferring glycosyl groups
FY132_19115	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FY132_19120	COG3206	protein involved in exopolysaccharide biosynthesis
FY132_19120	COG0489	protein tyrosine kinase activity
FY132_19125	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY132_19130	COG0784	Response regulator, receiver
FY132_19130	COG4191	Histidine kinase
FY132_19145	COG4176	ABC-type proline glycine betaine transport system permease component
FY132_19150	COG4175	Glycine betaine
FY132_19150	COG3448	diguanylate cyclase activity
FY132_19165	COG0564	pseudouridine synthase activity
FY132_19170	COG0500	methyltransferase
FY132_19180	COG2133	pyrroloquinoline quinone binding
FY132_19190	COG2197	response regulator
FY132_19195	COG4585	Histidine kinase
FY132_19200	COG1879	ABC-type sugar transport system periplasmic component
FY132_19205	COG1129	ABC transporter
FY132_19210	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_19220	COG3386	PFAM SMP-30 Gluconolaconase
FY132_19225	COG2137	regulation of response to DNA damage stimulus
FY132_19230	COG3474	cytochrome
FY132_19240	COG1120	ATPase activity
FY132_19255	COG4774	siderophore transport
FY132_19260	COG0583	DNA-binding transcription factor activity
FY132_19270	COG2194	sulfuric ester hydrolase activity
FY132_19285	COG0477	Major facilitator Superfamily
FY132_19310	COG0673	inositol 2-dehydrogenase activity
FY132_19315	COG0697	spore germination
FY132_19325	COG0010	Belongs to the arginase family
FY132_19340	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FY132_19345	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY132_19350	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FY132_19355	COG0156	8-amino-7-oxononanoate synthase activity
FY132_19360	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FY132_19410	COG0671	phosphoesterase, PA-phosphatase related
FY132_19415	COG0745	RESPONSE REGULATOR receiver
FY132_19420	COG2205	protein histidine kinase activity
FY132_19430	COG0477	Major facilitator Superfamily
FY132_19435	COG0583	DNA-binding transcription factor activity
FY132_19455	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FY132_19470	COG0346	lactoylglutathione lyase activity
FY132_19475	COG0583	DNA-binding transcription factor activity
FY132_19505	COG1215	transferase activity, transferring glycosyl groups
FY132_19525	COG0840	transmembrane signaling receptor activity
FY132_19540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_19555	COG2828	Protein conserved in bacteria
FY132_19560	COG0583	DNA-binding transcription factor activity
FY132_19565	COG1846	Transcriptional regulator
FY132_19590	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_19595	COG1309	transcriptional regulator
FY132_19600	COG2207	Transcriptional regulator
FY132_19615	COG1566	PFAM secretion protein HlyD family protein
FY132_19635	COG0395	ABC-type sugar transport system, permease component
FY132_19640	COG4166	transmembrane transport
FY132_19645	COG0601	transmembrane transport
FY132_19650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_19655	COG4172	Belongs to the ABC transporter superfamily
FY132_19695	COG0402	S-adenosylhomocysteine deaminase activity
FY132_19700	COG1228	amidohydrolase
FY132_19705	COG2986	histidine ammonia-lyase
FY132_19715	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FY132_19745	COG1192	Involved in chromosome partitioning
FY132_19750	COG1475	DNA binding
FY132_19755	COG1414	Transcriptional regulator
FY132_19775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY132_19780	COG4771	TonB-dependent receptor
FY132_19790	COG0366	Alpha amylase catalytic
FY132_19795	COG4770	biotin carboxylase activity
FY132_19800	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FY132_19805	COG4336	lyase activity
FY132_19810	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY132_19815	COG1914	H( )-stimulated, divalent metal cation uptake system
FY132_19820	COG1802	Transcriptional regulator
FY132_19825	COG3707	response regulator
FY132_19835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY132_19840	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_19845	COG1116	anion transmembrane transporter activity
FY132_19850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FY132_19860	COG0243	molybdopterin cofactor binding
FY132_19865	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FY132_19865	COG1648	precorrin-2 dehydrogenase activity
FY132_19880	COG3842	ATPase activity
FY132_19895	COG0395	ABC-type sugar transport system, permease component
FY132_19910	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FY132_19925	COG0071	Belongs to the small heat shock protein (HSP20) family
FY132_19970	COG1879	ABC-type sugar transport system periplasmic component
FY132_19975	COG1129	ABC transporter
FY132_19980	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_19990	COG0667	Aldo Keto reductase
FY132_19995	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FY132_20000	COG1830	Aldolase
FY132_20005	COG1070	Carbohydrate kinase
FY132_20010	COG0840	transmembrane signaling receptor activity
FY132_20025	COG0436	Aminotransferase
FY132_20035	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FY132_20045	COG3842	ATPase activity
FY132_20050	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FY132_20055	COG1984	allophanate hydrolase subunit 2
FY132_20060	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FY132_20070	COG0439	Biotin carboxylase
FY132_20075	COG0511	ligase activity, forming carbon-carbon bonds
FY132_20080	COG0697	spore germination
FY132_20085	COG0697	spore germination
FY132_20100	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY132_20115	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY132_20120	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_20125	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY132_20130	COG4221	oxidoreductase activity
FY132_20135	COG0765	amino acid transport
FY132_20140	COG0765	amino acid transport
FY132_20150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_20155	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY132_20160	COG1063	alcohol dehydrogenase
FY132_20175	COG1304	FMN binding
FY132_20200	COG3842	ATPase activity
FY132_20210	COG0395	ABC-type sugar transport system, permease component
FY132_20215	COG1175	transmembrane transport
FY132_20230	COG2186	Transcriptional regulator
FY132_20235	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FY132_20240	COG0488	(ABC) transporter
FY132_20255	COG2307	Protein conserved in bacteria
FY132_20255	COG2308	Evidence 4 Homologs of previously reported genes of
FY132_20295	COG1454	alcohol dehydrogenase
FY132_20300	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FY132_20315	COG0601	transmembrane transport
FY132_20320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_20330	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_20375	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY132_20400	COG1082	Xylose isomerase domain protein TIM barrel
FY132_20405	COG0673	inositol 2-dehydrogenase activity
FY132_20410	COG1082	Xylose isomerase domain protein TIM barrel
FY132_20430	COG1609	Transcriptional regulator
FY132_20435	COG2986	histidine ammonia-lyase
FY132_20440	COG4175	Glycine betaine
FY132_20440	COG0517	IMP dehydrogenase activity
FY132_20445	COG4176	ABC-type proline glycine betaine transport system permease component
FY132_20485	COG2186	Transcriptional regulator
FY132_20490	COG1027	Aspartate ammonia-lyase
FY132_20500	COG0252	asparaginase activity
FY132_20510	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FY132_20515	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FY132_20520	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FY132_20525	COG2205	protein histidine kinase activity
FY132_20540	COG0067	glutamate synthase
FY132_20540	COG0069	glutamate synthase activity
FY132_20540	COG0070	glutamate synthase
FY132_20555	COG2205	protein histidine kinase activity
FY132_20570	COG2951	lytic endotransglycosylase activity
FY132_20575	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FY132_20600	COG0330	HflC and HflK could
FY132_20605	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FY132_20610	COG0737	Belongs to the 5'-nucleotidase family
FY132_20620	COG5310	Homospermidine synthase
FY132_20630	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FY132_20635	COG1164	Oligoendopeptidase f
FY132_20640	COG2204	response regulator
FY132_20645	COG3108	Peptidase M15
FY132_20650	COG0469	pyruvate kinase activity
FY132_20670	COG3750	Belongs to the UPF0335 family
FY132_20675	COG0457	Tetratricopeptide repeat
FY132_20680	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FY132_20685	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FY132_20690	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FY132_20720	COG0483	inositol monophosphate 1-phosphatase activity
FY132_20740	COG1132	(ABC) transporter
FY132_20745	COG0254	rRNA binding
FY132_20765	COG3588	fructose-bisphosphate aldolase
FY132_20770	COG0126	phosphoglycerate kinase activity
FY132_20810	COG1253	flavin adenine dinucleotide binding
FY132_20820	COG1692	metallophosphoesterase
FY132_20835	COG0217	transcriptional regulatory protein
FY132_20840	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_20845	COG0840	transmembrane signaling receptor activity
FY132_20850	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FY132_20855	COG0632	four-way junction helicase activity
FY132_20860	COG2255	four-way junction helicase activity
FY132_20875	COG0494	nUDIX hydrolase
FY132_20885	COG0824	Thioesterase
FY132_20905	COG0823	Involved in the tonB-independent uptake of proteins
FY132_20910	COG2885	chlorophyll binding
FY132_20920	COG0037	tRNA processing
FY132_20925	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY132_20930	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FY132_20945	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY132_20960	COG0482	sulfurtransferase activity
FY132_20990	COG2835	tetraacyldisaccharide 4'-kinase activity
FY132_20995	COG2373	Large extracellular alpha-helical protein
FY132_21000	COG4953	penicillin-binding protein 1C
FY132_21010	COG1473	amidohydrolase
FY132_21015	COG1686	Belongs to the peptidase S11 family
FY132_21020	COG0523	cobalamin synthesis protein
FY132_21025	COG0425	Belongs to the sulfur carrier protein TusA family
FY132_21025	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FY132_21030	COG3034	peptidoglycan biosynthetic process
FY132_21035	COG0825	malonyl-CoA metabolic process
FY132_21040	COG4974	Belongs to the 'phage' integrase family
FY132_21050	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FY132_21055	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FY132_21095	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FY132_21100	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FY132_21120	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY132_21125	COG2226	methyltransferase
FY132_21130	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FY132_21135	COG0287	Prephenate dehydrogenase
FY132_21145	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FY132_21165	COG2884	Cell division ATP-binding protein ftsE
FY132_21200	COG0165	Argininosuccinate lyase
FY132_21205	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FY132_21215	COG1250	3-hydroxyacyl-CoA dehydrogenase
FY132_21225	COG2086	electron transfer activity
FY132_21235	COG2096	Adenosyltransferase
FY132_21245	COG0300	oxidoreductase activity
FY132_21255	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FY132_21265	COG1396	sequence-specific DNA binding
FY132_21265	COG3800	Transcriptional regulator
FY132_21270	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FY132_21275	COG0625	glutathione transferase activity
FY132_21290	COG4770	biotin carboxylase activity
FY132_21295	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FY132_21295	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
FY132_21300	COG0346	lactoylglutathione lyase activity
FY132_21315	COG4213	ABC transporter substrate-binding protein
FY132_21320	COG4214	carbohydrate transport
FY132_21325	COG1129	ABC transporter
FY132_21330	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FY132_21340	COG1396	sequence-specific DNA binding
FY132_21395	COG3833	ABC-type maltose transport systems, permease component
FY132_21400	COG3842	ATPase activity
FY132_21415	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
FY132_21415	COG2273	Hydrolase Family 16
FY132_21420	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FY132_21435	COG0438	transferase activity, transferring glycosyl groups
FY132_21440	COG0438	transferase activity, transferring glycosyl groups
FY132_21460	COG3206	protein involved in exopolysaccharide biosynthesis
FY132_21460	COG0489	protein tyrosine kinase activity
FY132_21470	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FY132_21485	COG2244	polysaccharide biosynthetic process
FY132_21550	COG0697	spore germination
FY132_21555	COG0653	protein targeting
FY132_21560	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FY132_21565	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FY132_21575	COG0494	nUDIX hydrolase
FY132_21590	COG2226	methyltransferase
FY132_21595	COG1040	competence protein
FY132_21605	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY132_21615	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY132_21630	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FY132_21635	COG4150	thiosulfate binding
FY132_21645	COG4208	sulfate ABC transporter
FY132_21650	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FY132_21655	COG4335	DNA alkylation repair
FY132_21670	COG5001	Diguanylate cyclase
FY132_21675	COG2264	protein methyltransferase activity
FY132_21690	COG3254	rhamnose metabolic process
FY132_21695	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_21700	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_21705	COG1129	ABC transporter
FY132_21715	COG1349	DNA-binding transcription factor activity
FY132_21720	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_21720	COG3347	Dehydrogenase
FY132_21725	COG4952	isomerase
FY132_21730	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FY132_21735	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FY132_21755	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FY132_21760	COG1960	acyl-CoA dehydrogenase activity
FY132_21770	COG0183	Belongs to the thiolase family
FY132_21775	COG1960	acyl-CoA dehydrogenase activity
FY132_21785	COG0022	dehydrogenase e1 component
FY132_21795	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FY132_21800	COG2391	methyltransferase activity
FY132_21810	COG0640	Transcriptional regulator
FY132_21815	COG3453	Protein conserved in bacteria
FY132_21815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FY132_21825	COG0300	oxidoreductase activity
FY132_21840	COG2186	Transcriptional regulator
FY132_21850	COG0601	transmembrane transport
FY132_21860	COG0444	Belongs to the ABC transporter superfamily
FY132_21865	COG4608	Belongs to the ABC transporter superfamily
FY132_21995	COG2369	cell adhesion
FY132_22000	COG4383	Mu-like prophage protein gp29
FY132_22005	COG4373	Mu-like prophage FluMu protein gp28
FY132_22140	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_22145	COG1733	regulation of RNA biosynthetic process
FY132_22155	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22160	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22180	COG1473	amidohydrolase
FY132_22185	COG0747	negative chemotaxis
FY132_22200	COG4166	transmembrane transport
FY132_22205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22210	COG0583	DNA-binding transcription factor activity
FY132_22220	COG0667	Aldo Keto reductase
FY132_22230	COG0444	Belongs to the ABC transporter superfamily
FY132_22245	COG0747	negative chemotaxis
FY132_22255	COG1960	acyl-CoA dehydrogenase activity
FY132_22285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22290	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FY132_22300	COG1959	2 iron, 2 sulfur cluster binding
FY132_22305	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22310	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22315	COG1473	amidohydrolase
FY132_22325	COG1126	abc transporter atp-binding protein
FY132_22330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_22340	COG0583	DNA-binding transcription factor activity
FY132_22355	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_22365	COG1522	sequence-specific DNA binding
FY132_22370	COG4172	Belongs to the ABC transporter superfamily
FY132_22375	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_22410	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_22415	COG1012	belongs to the aldehyde dehydrogenase family
FY132_22420	COG0473	3-isopropylmalate dehydrogenase activity
FY132_22425	COG1012	belongs to the aldehyde dehydrogenase family
FY132_22470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_22475	COG1120	ATPase activity
FY132_22485	COG2226	methyltransferase
FY132_22500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_22505	COG1120	ATPase activity
FY132_22510	COG1595	DNA-templated transcription, initiation
FY132_22530	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
FY132_22535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_22555	COG0673	inositol 2-dehydrogenase activity
FY132_22560	COG0673	inositol 2-dehydrogenase activity
FY132_22570	COG1175	transmembrane transport
FY132_22575	COG0395	ABC-type sugar transport system, permease component
FY132_22580	COG3842	ATPase activity
FY132_22590	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY132_22595	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY132_22600	COG2197	response regulator
FY132_22605	COG0601	transmembrane transport
FY132_22610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_22630	COG0747	negative chemotaxis
FY132_22645	COG1446	asparaginase
FY132_22650	COG0583	DNA-binding transcription factor activity
FY132_22655	COG0601	transmembrane transport
FY132_22660	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_22675	COG0747	negative chemotaxis
FY132_22680	COG1473	amidohydrolase
FY132_22695	COG1129	ABC transporter
FY132_22700	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_22705	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FY132_22710	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FY132_22720	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY132_22735	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_22745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_22750	COG2079	MmgE PrpD family protein
FY132_22755	COG1126	abc transporter atp-binding protein
FY132_22760	COG0765	amino acid transport
FY132_22775	COG0280	phosphate acetyltransferase
FY132_22775	COG0281	malic enzyme
FY132_22780	COG0583	DNA-binding transcription factor activity
FY132_22805	COG1175	transmembrane transport
FY132_22810	COG0395	ABC-type sugar transport system, permease component
FY132_22825	COG0673	inositol 2-dehydrogenase activity
FY132_22830	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FY132_22835	COG0720	synthase
FY132_22840	COG0602	queuosine metabolic process
FY132_22845	COG0673	inositol 2-dehydrogenase activity
FY132_22855	COG3842	ATPase activity
FY132_22870	COG1653	transport
FY132_22875	COG1609	Transcriptional regulator
FY132_22890	COG2094	Belongs to the DNA glycosylase MPG family
FY132_22900	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_22910	COG1376	ErfK ybiS ycfS ynhG family protein
FY132_22915	COG0840	transmembrane signaling receptor activity
FY132_22920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY132_22930	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FY132_22935	COG1596	polysaccharide export
FY132_22940	COG3307	-O-antigen
FY132_22970	COG2197	response regulator
FY132_22980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY132_23005	COG2942	2-epimerase
FY132_23015	COG1215	transferase activity, transferring glycosyl groups
FY132_23035	COG1473	amidohydrolase
FY132_23045	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_23050	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FY132_23055	COG1301	dicarboxylic acid transport
FY132_23060	COG4191	Histidine kinase
FY132_23065	COG2204	response regulator
FY132_23080	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_23085	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FY132_23090	COG1522	sequence-specific DNA binding
FY132_23095	COG0351	phosphomethylpyrimidine kinase
FY132_23100	COG0352	thiamine-phosphate diphosphorylase activity
FY132_23105	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FY132_23110	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY132_23115	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_23125	COG1501	Belongs to the glycosyl hydrolase 31 family
FY132_23130	COG0395	ABC-type sugar transport system, permease component
FY132_23135	COG1175	transmembrane transport
FY132_23140	COG1653	transport
FY132_23145	COG3842	ATPase activity
FY132_23150	COG2188	Transcriptional regulator
FY132_23160	COG4989	oxidoreductase activity
FY132_23195	COG0438	transferase activity, transferring glycosyl groups
FY132_23200	COG0747	negative chemotaxis
FY132_23205	COG0601	transmembrane transport
FY132_23215	COG3964	amidohydrolase
FY132_23230	COG1921	L-seryl-tRNASec selenium transferase activity
FY132_23235	COG4172	Belongs to the ABC transporter superfamily
FY132_23240	COG0625	glutathione transferase activity
FY132_23255	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_23260	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FY132_23260	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY132_23265	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY132_23285	COG1312	Catalyzes the dehydration of D-mannonate
FY132_23290	COG1063	alcohol dehydrogenase
FY132_23295	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FY132_23305	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY132_23310	COG2186	Transcriptional regulator
FY132_23315	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FY132_23320	COG0850	regulation of cytokinetic process
FY132_23325	COG2894	cell division
FY132_23330	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FY132_23335	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_23345	COG5001	Diguanylate cyclase
FY132_23360	COG0673	inositol 2-dehydrogenase activity
FY132_23370	COG1653	transport
FY132_23375	COG1175	transmembrane transport
FY132_23380	COG0395	ABC-type sugar transport system, permease component
FY132_23385	COG3842	ATPase activity
FY132_23395	COG0673	inositol 2-dehydrogenase activity
FY132_23425	COG0587	DNA-directed DNA polymerase activity
FY132_23430	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FY132_23445	COG2186	Transcriptional regulator
FY132_23450	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_23455	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_23460	COG1129	ABC transporter
FY132_23465	COG1879	ABC-type sugar transport system periplasmic component
FY132_23470	COG0129	dihydroxy-acid dehydratase activity
FY132_23480	COG0346	lactoylglutathione lyase activity
FY132_23495	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FY132_23500	COG4608	Belongs to the ABC transporter superfamily
FY132_23510	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_23515	COG0601	transmembrane transport
FY132_23520	COG0747	negative chemotaxis
FY132_23530	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FY132_23535	COG5001	Diguanylate cyclase
FY132_23545	COG3257	ureidoglycine aminohydrolase activity
FY132_23555	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_23560	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY132_23570	COG1129	ABC transporter
FY132_23575	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_23580	COG1879	ABC-type sugar transport system periplasmic component
FY132_23585	COG0583	DNA-binding transcription factor activity
FY132_23610	COG3047	cAMP biosynthetic process
FY132_23620	COG3842	ATPase activity
FY132_23625	COG0395	ABC-type sugar transport system, permease component
FY132_23630	COG1175	transmembrane transport
FY132_23635	COG1653	transport
FY132_23640	COG0523	cobalamin synthesis protein
FY132_23655	COG0523	cobalamin synthesis protein
FY132_23660	COG1121	(ABC) transporter
FY132_23670	COG0803	Belongs to the bacterial solute-binding protein 9 family
FY132_23675	COG0454	-acetyltransferase
FY132_23690	COG0626	cystathionine gamma-synthase activity
FY132_23695	COG2182	Extracellular solute-binding protein
FY132_23705	COG0395	ABC-type sugar transport system, permease component
FY132_23720	COG0395	ABC-type sugar transport system, permease component
FY132_23725	COG1175	transmembrane transport
FY132_23730	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
FY132_23735	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FY132_23745	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_23750	COG1063	alcohol dehydrogenase
FY132_23755	COG1609	Transcriptional regulator
FY132_23760	COG2223	nitrite transmembrane transporter activity
FY132_23765	COG4977	sequence-specific DNA binding
FY132_23795	COG0667	Aldo Keto reductase
FY132_23810	COG2186	Transcriptional regulator
FY132_23815	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FY132_23820	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
FY132_23825	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_23830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FY132_23835	COG4948	Mandelate Racemase Muconate Lactonizing
FY132_23840	COG3618	amidohydrolase
FY132_23850	COG1175	transmembrane transport
FY132_23855	COG0395	ABC-type sugar transport system, permease component
FY132_23860	COG3842	ATPase activity
FY132_23875	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
FY132_23880	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FY132_23900	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FY132_23910	COG1278	Cold shock
FY132_23915	COG0673	inositol 2-dehydrogenase activity
FY132_23930	COG0673	inositol 2-dehydrogenase activity
FY132_23935	COG1309	transcriptional regulator
FY132_23940	COG1653	transport
FY132_23945	COG1175	transmembrane transport
FY132_23950	COG0395	ABC-type sugar transport system, permease component
FY132_23955	COG3842	ATPase activity
FY132_23960	COG1082	Xylose isomerase domain protein TIM barrel
FY132_23975	COG1609	Transcriptional regulator
FY132_24005	COG1175	transmembrane transport
FY132_24010	COG0395	ABC-type sugar transport system, permease component
FY132_24015	COG1116	anion transmembrane transporter activity
FY132_24020	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_24025	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY132_24040	COG3842	ATPase activity
FY132_24045	COG0395	ABC-type sugar transport system, permease component
FY132_24055	COG1653	transport
FY132_24090	COG3842	ATPase activity
FY132_24100	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_24105	COG0395	ABC-type sugar transport system, permease component
FY132_24165	COG2233	PERMEase
FY132_24180	COG5002	protein histidine kinase activity
FY132_24185	COG0745	RESPONSE REGULATOR receiver
FY132_24190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FY132_24195	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FY132_24200	COG0702	epimerase
FY132_24210	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FY132_24245	COG2235	arginine
FY132_24255	COG0628	permease
FY132_24280	COG1522	sequence-specific DNA binding
FY132_24300	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_24315	COG1414	Transcriptional regulator
FY132_24325	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FY132_24355	COG4566	intracellular signal transduction
FY132_24360	COG4566	intracellular signal transduction
FY132_24370	COG0243	molybdopterin cofactor binding
FY132_24375	COG0783	Belongs to the Dps family
FY132_24390	COG0596	Alpha beta hydrolase
FY132_24400	COG1764	response to oxidative stress
FY132_24415	COG0596	Alpha beta hydrolase
FY132_24450	COG4172	Belongs to the ABC transporter superfamily
FY132_24475	COG0601	transmembrane transport
FY132_24480	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_24485	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_24495	COG4106	trans-aconitate 2-methyltransferase activity
FY132_24500	COG0025	NhaP-type Na H and K H
FY132_24505	COG4302	ethanolamine ammonia-lyase activity
FY132_24530	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY132_24535	COG1349	DNA-binding transcription factor activity
FY132_24540	COG4608	Belongs to the ABC transporter superfamily
FY132_24550	COG0601	transmembrane transport
FY132_24555	COG0747	negative chemotaxis
FY132_24560	COG1454	alcohol dehydrogenase
FY132_24565	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FY132_24570	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FY132_24575	COG0411	ABC transporter
FY132_24610	COG1278	Cold shock
FY132_24640	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FY132_24650	COG1192	Involved in chromosome partitioning
FY132_24655	COG1475	DNA binding
FY132_24660	COG0640	Transcriptional regulator
FY132_24675	COG1126	abc transporter atp-binding protein
FY132_24680	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FY132_24685	COG1609	Transcriptional regulator
FY132_24720	COG3239	Fatty acid desaturase
FY132_24730	COG1278	Cold shock
FY132_24810	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FY132_24810	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
FY132_24845	COG4191	Histidine kinase
FY132_24850	COG1132	(ABC) transporter
FY132_24860	COG0640	Transcriptional regulator
FY132_24890	COG4977	sequence-specific DNA binding
FY132_24895	COG2211	Major facilitator Superfamily
FY132_24900	COG2807	transmembrane transport
FY132_24905	COG1846	Transcriptional regulator
FY132_24920	COG2814	Major facilitator Superfamily
FY132_24950	COG3443	Belongs to the bacterial solute-binding protein 9 family
FY132_24965	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FY132_24970	COG0583	DNA-binding transcription factor activity
FY132_24985	COG0071	Belongs to the small heat shock protein (HSP20) family
FY132_25030	COG3838	Conjugal transfer protein Trbc
FY132_25035	COG3702	type iv secretory pathway
FY132_25040	COG3451	type IV secretory pathway VirB4
FY132_25055	COG3704	protein secretion by the type IV secretion system
FY132_25065	COG3736	Type IV secretory pathway, component VirB8
FY132_25070	COG3504	Conjugal transfer protein
FY132_25075	COG2948	multi-organism process
FY132_25080	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
FY132_25180	COG3831	ATPase activity
FY132_25195	COG3505	Type IV secretory pathway VirD4
FY132_25220	COG0583	DNA-binding transcription factor activity
FY132_25260	COG0745	RESPONSE REGULATOR receiver
FY132_25300	COG3842	ATPase activity
FY132_25305	COG4208	sulfate ABC transporter
FY132_25310	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_25330	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FY132_25335	COG1942	4-Oxalocrotonate Tautomerase
FY132_25345	COG3971	2-oxopent-4-enoate hydratase activity
FY132_25355	COG1414	Transcriptional regulator
FY132_25365	COG1137	ATPase activity
FY132_25380	COG4177	L-phenylalanine transmembrane transporter activity
FY132_25400	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FY132_25405	COG1175	transmembrane transport
FY132_25410	COG0395	ABC-type sugar transport system, permease component
FY132_25420	COG0366	Alpha amylase catalytic
FY132_25425	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FY132_25430	COG1082	Xylose isomerase domain protein TIM barrel
FY132_25435	COG3842	ATPase activity
FY132_25445	COG1940	carbohydrate kinase activity
FY132_25450	COG0395	ABC-type sugar transport system, permease component
FY132_25460	COG2182	Extracellular solute-binding protein
FY132_25465	COG0673	inositol 2-dehydrogenase activity
FY132_25495	COG1126	abc transporter atp-binding protein
FY132_25500	COG0765	amino acid transport
FY132_25505	COG0765	amino acid transport
FY132_25515	COG4608	Belongs to the ABC transporter superfamily
FY132_25525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_25540	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY132_25545	COG0583	DNA-binding transcription factor activity
FY132_25550	COG2423	ornithine cyclodeaminase activity
FY132_25560	COG1957	nucleoside hydrolase
FY132_25580	COG1335	isochorismatase
FY132_25585	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_25630	COG0583	DNA-binding transcription factor activity
FY132_25635	COG1902	pentaerythritol trinitrate reductase activity
FY132_25640	COG0583	DNA-binding transcription factor activity
FY132_25645	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_25655	COG1335	isochorismatase
FY132_25660	COG0583	DNA-binding transcription factor activity
FY132_25670	COG1695	Transcriptional regulator
FY132_25750	COG2207	Transcriptional regulator
FY132_25795	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_25810	COG1802	Transcriptional regulator
FY132_25815	COG3485	protocatechuate 3,4-dioxygenase
FY132_25820	COG3971	2-oxopent-4-enoate hydratase activity
FY132_25835	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FY132_25840	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FY132_25855	COG1063	alcohol dehydrogenase
FY132_25865	COG1960	acyl-CoA dehydrogenase activity
FY132_25870	COG1024	Enoyl-CoA hydratase
FY132_25880	COG1012	belongs to the aldehyde dehydrogenase family
FY132_25885	COG0477	Major facilitator Superfamily
FY132_25900	COG3706	GGDEF domain
FY132_25920	COG1846	Transcriptional regulator
FY132_25960	COG1012	belongs to the aldehyde dehydrogenase family
FY132_25970	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FY132_25980	COG3386	PFAM SMP-30 Gluconolaconase
FY132_25985	COG3622	Belongs to the hyi family
FY132_25990	COG2084	Dehydrogenase
FY132_26015	COG1940	carbohydrate kinase activity
FY132_26020	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_26030	COG1129	ABC transporter
FY132_26050	COG0583	DNA-binding transcription factor activity
FY132_26055	COG2271	Major facilitator Superfamily
FY132_26065	COG2272	Belongs to the type-B carboxylesterase lipase family
FY132_26085	COG1129	ABC transporter
FY132_26110	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FY132_26120	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
FY132_26155	COG0583	DNA-binding transcription factor activity
FY132_26160	COG1414	Transcriptional regulator
FY132_26170	COG4948	Mandelate Racemase Muconate Lactonizing
FY132_26180	COG3842	ATPase activity
FY132_26185	COG1175	transmembrane transport
FY132_26190	COG0395	ABC-type sugar transport system, permease component
FY132_26200	COG0477	Major facilitator Superfamily
FY132_26235	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FY132_26255	COG0747	negative chemotaxis
FY132_26265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_26280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_26290	COG4215	(ABC) transporter
FY132_26345	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FY132_26350	COG0251	oxidation-reduction process
FY132_26355	COG3547	Transposase (IS116 IS110 IS902 family)
FY132_26390	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_26395	COG1335	isochorismatase
FY132_26405	COG1309	transcriptional regulator
FY132_26410	COG4604	ABC transporter, ATP-binding protein
FY132_26415	COG4605	iron ion homeostasis
FY132_26420	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FY132_26430	COG2132	Multicopper oxidase
FY132_26435	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FY132_26440	COG4771	TonB-dependent receptor
FY132_26475	COG1695	Transcriptional regulator
FY132_26510	COG2132	Multicopper oxidase
FY132_26545	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FY132_26565	COG1192	Involved in chromosome partitioning
FY132_26570	COG1475	DNA binding
FY132_26575	COG0640	Transcriptional regulator
FY132_26580	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
FY132_26625	COG0583	DNA-binding transcription factor activity
FY132_26635	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FY132_26640	COG1116	anion transmembrane transporter activity
FY132_26645	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FY132_26655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_26660	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_26690	COG1172	Belongs to the binding-protein-dependent transport system permease family
FY132_26695	COG1129	ABC transporter
FY132_26720	COG4172	Belongs to the ABC transporter superfamily
FY132_26725	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_26730	COG0601	transmembrane transport
FY132_26740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_26745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FY132_26750	COG0583	DNA-binding transcription factor activity
FY132_26760	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FY132_26775	COG1132	(ABC) transporter
FY132_26780	COG4172	Belongs to the ABC transporter superfamily
FY132_26785	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_26805	COG1082	Xylose isomerase domain protein TIM barrel
FY132_26810	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FY132_26815	COG0019	diaminopimelate decarboxylase activity
FY132_26825	COG1475	DNA binding
FY132_26835	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FY132_26930	COG1475	DNA binding
FY132_26955	COG2824	Alkylphosphonate utilization operon protein PhnA
FY132_27005	COG5489	Protein of unknown function (DUF736)
FY132_27090	COG1283	sodium-dependent phosphate transmembrane transporter activity
FY132_27105	COG0747	negative chemotaxis
FY132_27110	COG0444	Belongs to the ABC transporter superfamily
FY132_27125	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_27130	COG0584	glycerophosphoryl diester phosphodiesterase
FY132_27135	COG0483	inositol monophosphate 1-phosphatase activity
FY132_27200	COG3161	chorismate lyase activity
FY132_27350	COG3436	PFAM IS66 Orf2 family protein
FY132_27430	COG2222	sugar isomerase
FY132_27440	COG0006	proline dipeptidase activity
FY132_27460	COG1177	transmembrane transport
FY132_27465	COG1176	ABC-type spermidine putrescine transport system, permease component I
FY132_27470	COG3842	ATPase activity
FY132_27500	COG3842	ATPase activity
FY132_27505	COG0006	proline dipeptidase activity
FY132_27525	COG0300	oxidoreductase activity
FY132_27530	COG0129	dihydroxy-acid dehydratase activity
FY132_27535	COG0667	Aldo Keto reductase
FY132_27545	COG1028	Short-chain dehydrogenase reductase Sdr
FY132_27555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_27560	COG0601	transmembrane transport
FY132_27565	COG4172	Belongs to the ABC transporter superfamily
FY132_27575	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FY132_27610	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FY132_27645	COG3701	Conjugal transfer protein
FY132_27650	COG3846	protein secretion by the type IV secretion system
FY132_27660	COG5314	conjugation
FY132_27665	COG3451	type IV secretory pathway VirB4
FY132_27680	COG4962	Type ii secretion system protein e