locus-tag class description FY137_00005 PF00308 Bacterial dnaA protein FY137_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY137_00005 PF11638 DnaA N-terminal domain FY137_00010 PF06969 HemN C-terminal domain FY137_00010 PF04055 Radical SAM superfamily FY137_00015 PF01725 Ham1 family FY137_00020 PF01138 3' exoribonuclease family, domain 1 FY137_00020 PF03725 3' exoribonuclease family, domain 2 FY137_00025 PF01628 HrcA protein C terminal domain FY137_00030 PF01025 GrpE FY137_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY137_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY137_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY137_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY137_00045 PF04963 Sigma-54 factor, core binding domain FY137_00045 PF04552 Sigma-54, DNA binding domain FY137_00050 PF00005 ABC transporter FY137_00055 PF03968 OstA-like protein FY137_00065 PF01343 Peptidase family S49 FY137_00070 PF00216 Bacterial DNA-binding protein FY137_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY137_00080 PF17785 PUA-like domain FY137_00085 PF00588 SpoU rRNA Methylase family FY137_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY137_00090 PF01252 Signal peptidase (SPase) II FY137_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY137_00095 PF00072 Response regulator receiver domain FY137_00095 PF01627 Hpt domain FY137_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_00095 PF00672 HAMP domain FY137_00095 PF00512 His Kinase A (phospho-acceptor) domain FY137_00105 PF01624 MutS domain I FY137_00105 PF05188 MutS domain II FY137_00105 PF05192 MutS domain III FY137_00105 PF05190 MutS family domain IV FY137_00105 PF00488 MutS domain V FY137_00110 PF01909 Nucleotidyltransferase domain FY137_00110 PF01966 HD domain FY137_00110 PF01842 ACT domain FY137_00110 PF08335 GlnD PII-uridylyltransferase FY137_00115 PF03023 Lipid II flippase MurJ FY137_00125 PF00579 tRNA synthetases class I (W and Y) FY137_00135 PF01106 NifU-like domain FY137_00140 PF00814 Glycoprotease family FY137_00145 PF00583 Acetyltransferase (GNAT) family FY137_00145 PF13508 Acetyltransferase (GNAT) domain FY137_00150 PF01475 Ferric uptake regulator family FY137_00155 PF01553 Acyltransferase FY137_00160 PF04055 Radical SAM superfamily FY137_00160 PF01938 TRAM domain FY137_00160 PF00919 Uncharacterized protein family UPF0004 FY137_00165 PF02562 PhoH-like protein FY137_00170 PF02130 Uncharacterized protein family UPF0054 FY137_00175 PF00571 CBS domain FY137_00175 PF03471 Transporter associated domain FY137_00180 PF00795 Carbon-nitrogen hydrolase FY137_00185 PF01381 Helix-turn-helix FY137_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY137_00190 PF02772 S-adenosylmethionine synthetase, central domain FY137_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY137_00195 PF02390 Putative methyltransferase FY137_00200 PF00294 pfkB family carbohydrate kinase FY137_00205 PF02646 RmuC family FY137_00210 PF01327 Polypeptide deformylase FY137_00215 PF02911 Formyl transferase, C-terminal domain FY137_00215 PF00551 Formyl transferase FY137_00220 PF01416 tRNA pseudouridine synthase FY137_00230 PF01546 Peptidase family M20/M25/M40 FY137_00230 PF07687 Peptidase dimerisation domain FY137_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY137_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY137_00245 PF00672 HAMP domain FY137_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY137_00255 PF00011 Hsp20/alpha crystallin family FY137_00280 PF00696 Amino acid kinase family FY137_00290 PF01926 50S ribosome-binding GTPase FY137_00295 PF14849 YidC periplasmic domain FY137_00295 PF02096 60Kd inner membrane protein FY137_00300 PF00825 Ribonuclease P FY137_00305 PF00468 Ribosomal protein L34 FY137_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_00310 PF00672 HAMP domain FY137_00315 PF00512 His Kinase A (phospho-acceptor) domain FY137_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_00325 PF01209 ubiE/COQ5 methyltransferase family FY137_00330 PF00005 ABC transporter FY137_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY137_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY137_00350 PF00149 Calcineurin-like phosphoesterase FY137_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY137_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY137_00365 PF05544 Proline racemase FY137_00370 PF01979 Amidohydrolase family FY137_00375 PF00156 Phosphoribosyl transferase domain FY137_00380 PF00294 pfkB family carbohydrate kinase FY137_00395 PF00342 Phosphoglucose isomerase FY137_00400 PF00501 AMP-binding enzyme FY137_00400 PF13193 AMP-binding enzyme C-terminal domain FY137_00405 PF08402 TOBE domain FY137_00405 PF00005 ABC transporter FY137_00415 PF00528 Binding-protein-dependent transport system inner membrane component FY137_00420 PF00593 TonB dependent receptor FY137_00420 PF07715 TonB-dependent Receptor Plug Domain FY137_00440 PF01679 Proteolipid membrane potential modulator FY137_00460 PF03976 Polyphosphate kinase 2 (PPK2) FY137_00465 PF16736 Single Cache-like FY137_00465 PF00989 PAS fold FY137_00465 PF00512 His Kinase A (phospho-acceptor) domain FY137_00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_00470 PF12849 PBP superfamily domain FY137_00475 PF00528 Binding-protein-dependent transport system inner membrane component FY137_00480 PF00528 Binding-protein-dependent transport system inner membrane component FY137_00485 PF00005 ABC transporter FY137_00490 PF01895 PhoU domain FY137_00495 PF00486 Transcriptional regulatory protein, C terminal FY137_00495 PF00072 Response regulator receiver domain FY137_00505 PF00202 Aminotransferase class-III FY137_00510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY137_00510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY137_00515 PF01430 Hsp33 protein FY137_00520 PF04379 ApaG domain FY137_00525 PF01053 Cys/Met metabolism PLP-dependent enzyme FY137_00535 PF00692 dUTPase FY137_00545 PF00589 Phage integrase family FY137_00545 PF13356 Arm DNA-binding domain FY137_00555 PF00145 C-5 cytosine-specific DNA methylase FY137_00560 PF00145 C-5 cytosine-specific DNA methylase FY137_00575 PF02796 Helix-turn-helix domain of resolvase FY137_00575 PF00239 Resolvase, N terminal domain FY137_00585 PF00313 'Cold-shock' DNA-binding domain FY137_00635 PF01381 Helix-turn-helix FY137_00650 PF00664 ABC transporter transmembrane region FY137_00650 PF00005 ABC transporter FY137_00665 PF01022 Bacterial regulatory protein, arsR family FY137_00695 PF00230 Major intrinsic protein FY137_00735 PF00072 Response regulator receiver domain FY137_00735 PF00196 Bacterial regulatory proteins, luxR family FY137_00745 PF01180 Dihydroorotate dehydrogenase FY137_00760 PF08241 Methyltransferase domain FY137_00780 PF02082 Transcriptional regulator FY137_00785 PF08494 DEAD/H associated FY137_00785 PF00270 DEAD/DEAH box helicase FY137_00785 PF00271 Helicase conserved C-terminal domain FY137_00805 PF01925 Sulfite exporter TauE/SafE FY137_00815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_00815 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_00815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_00815 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY137_00820 PF00108 Thiolase, N-terminal domain FY137_00820 PF02803 Thiolase, C-terminal domain FY137_00825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY137_00825 PF00378 Enoyl-CoA hydratase/isomerase FY137_00825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY137_00855 PF03334 Na+/H+ antiporter subunit FY137_00860 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY137_00865 PF01899 Na+/H+ ion antiporter subunit FY137_00870 PF00361 Proton-conducting membrane transporter FY137_00875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY137_00880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY137_00880 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY137_00880 PF00361 Proton-conducting membrane transporter FY137_00880 PF13244 Domain of unknown function (DUF4040) FY137_00890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_00900 PF00072 Response regulator receiver domain FY137_00905 PF01584 CheW-like domain FY137_00905 PF02895 Signal transducing histidine kinase, homodimeric domain FY137_00905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_00905 PF01627 Hpt domain FY137_00910 PF01739 CheR methyltransferase, SAM binding domain FY137_00910 PF03705 CheR methyltransferase, all-alpha domain FY137_00915 PF01339 CheB methylesterase FY137_00915 PF00072 Response regulator receiver domain FY137_00920 PF00072 Response regulator receiver domain FY137_00925 PF03975 CheD chemotactic sensory transduction FY137_00935 PF01514 Secretory protein of YscJ/FliF family FY137_00935 PF08345 Flagellar M-ring protein C-terminal FY137_00940 PF03472 Autoinducer binding domain FY137_00940 PF00196 Bacterial regulatory proteins, luxR family FY137_00950 PF00672 HAMP domain FY137_00950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_00955 PF00672 HAMP domain FY137_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_00955 PF00512 His Kinase A (phospho-acceptor) domain FY137_00955 PF01627 Hpt domain FY137_00955 PF00072 Response regulator receiver domain FY137_00960 PF01741 Large-conductance mechanosensitive channel, MscL FY137_00965 PF00155 Aminotransferase class I and II FY137_00970 PF01370 NAD dependent epimerase/dehydratase family FY137_00980 PF03884 DNA gyrase inhibitor YacG FY137_00985 PF02545 Maf-like protein FY137_00990 PF01176 Translation initiation factor 1A / IF-1 FY137_01000 PF06793 Uncharacterised protein family (UPF0262) FY137_01005 PF00815 Histidinol dehydrogenase FY137_01015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY137_01030 PF00700 Bacterial flagellin C-terminal helical region FY137_01030 PF00669 Bacterial flagellin N-terminal helical region FY137_01035 PF00700 Bacterial flagellin C-terminal helical region FY137_01035 PF00669 Bacterial flagellin N-terminal helical region FY137_01040 PF00700 Bacterial flagellin C-terminal helical region FY137_01040 PF00669 Bacterial flagellin N-terminal helical region FY137_01045 PF00813 FliP family FY137_01055 PF02107 Flagellar L-ring protein FY137_01065 PF02119 Flagellar P-ring protein FY137_01070 PF13144 Chaperone for flagella basal body P-ring formation FY137_01075 PF00460 Flagella basal body rod protein FY137_01075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY137_01080 PF02049 Flagellar hook-basal body complex protein FliE FY137_01085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY137_01090 PF00460 Flagella basal body rod protein FY137_01100 PF18269 T3SS EscN ATPase C-terminal domain FY137_01100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY137_01105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY137_01105 PF00460 Flagella basal body rod protein FY137_01115 PF01618 MotA/TolQ/ExbB proton channel family FY137_01120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY137_01125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY137_01130 PF14842 FliG N-terminal domain FY137_01130 PF01706 FliG C-terminal domain FY137_01130 PF14841 FliG middle domain FY137_01135 PF01312 FlhB HrpN YscU SpaS Family FY137_01145 PF00669 Bacterial flagellin N-terminal helical region FY137_01145 PF00700 Bacterial flagellin C-terminal helical region FY137_01155 PF00691 OmpA family FY137_01155 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY137_01165 PF02120 Flagellar hook-length control protein FliK FY137_01175 PF00486 Transcriptional regulatory protein, C terminal FY137_01180 PF07559 Flagellar basal body protein FlaE FY137_01180 PF00460 Flagella basal body rod protein FY137_01180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY137_01200 PF07378 Flagellar protein FlbT FY137_01205 PF03963 Flagellar hook capping protein - N-terminal region FY137_01205 PF13860 FlgD Ig-like domain FY137_01205 PF13861 FlgD Tudor-like domain FY137_01210 PF01313 Bacterial export proteins, family 3 FY137_01215 PF00771 FHIPEP family FY137_01220 PF01311 Bacterial export proteins, family 1 FY137_01255 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY137_01255 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY137_01260 PF00356 Bacterial regulatory proteins, lacI family FY137_01265 PF01547 Bacterial extracellular solute-binding protein FY137_01270 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01275 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01280 PF00128 Alpha amylase, catalytic domain FY137_01285 PF17912 MalK OB fold domain FY137_01285 PF03459 TOBE domain FY137_01285 PF00005 ABC transporter FY137_01295 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY137_01310 PF00920 Dehydratase family FY137_01315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY137_01320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY137_01320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY137_01325 PF01266 FAD dependent oxidoreductase FY137_01330 PF00120 Glutamine synthetase, catalytic domain FY137_01355 PF00463 Isocitrate lyase family FY137_01360 PF09856 Predicted transcriptional regulator (DUF2083) FY137_01360 PF01381 Helix-turn-helix FY137_01360 PF06114 IrrE N-terminal-like domain FY137_01365 PF13416 Bacterial extracellular solute-binding protein FY137_01370 PF00005 ABC transporter FY137_01370 PF08402 TOBE domain FY137_01375 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01380 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_01390 PF00512 His Kinase A (phospho-acceptor) domain FY137_01390 PF00989 PAS fold FY137_01390 PF13188 PAS domain FY137_01390 PF13426 PAS domain FY137_01405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_01415 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_01420 PF01063 Amino-transferase class IV FY137_01425 PF03746 LamB/YcsF family FY137_01430 PF02682 Carboxyltransferase domain, subdomain C and D FY137_01435 PF02626 Carboxyltransferase domain, subdomain A and B FY137_01440 PF00392 Bacterial regulatory proteins, gntR family FY137_01440 PF07729 FCD domain FY137_01445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_01445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_01445 PF01842 ACT domain FY137_01450 PF01546 Peptidase family M20/M25/M40 FY137_01450 PF07687 Peptidase dimerisation domain FY137_01460 PF01321 Creatinase/Prolidase N-terminal domain FY137_01460 PF00557 Metallopeptidase family M24 FY137_01480 PF00005 ABC transporter FY137_01485 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01490 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_01495 PF01425 Amidase FY137_01500 PF00364 Biotin-requiring enzyme FY137_01500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_01500 PF00289 Biotin carboxylase, N-terminal domain FY137_01500 PF02785 Biotin carboxylase C-terminal domain FY137_01510 PF09347 Domain of unknown function (DUF1989) FY137_01515 PF00005 ABC transporter FY137_01520 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01535 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01540 PF00528 Binding-protein-dependent transport system inner membrane component FY137_01545 PF03459 TOBE domain FY137_01545 PF00005 ABC transporter FY137_01545 PF17912 MalK OB fold domain FY137_01555 PF08240 Alcohol dehydrogenase GroES-like domain FY137_01555 PF00107 Zinc-binding dehydrogenase FY137_01560 PF13378 Enolase C-terminal domain-like FY137_01560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_01565 PF13378 Enolase C-terminal domain-like FY137_01565 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_01575 PF02541 Ppx/GppA phosphatase family FY137_01580 PF01728 FtsJ-like methyltransferase FY137_01585 PF07690 Major Facilitator Superfamily FY137_01595 PF00478 IMP dehydrogenase / GMP reductase domain FY137_01595 PF00571 CBS domain FY137_01605 PF00107 Zinc-binding dehydrogenase FY137_01605 PF08240 Alcohol dehydrogenase GroES-like domain FY137_01610 PF01738 Dienelactone hydrolase family FY137_01615 PF00994 Probable molybdopterin binding domain FY137_01620 PF08544 GHMP kinases C terminal FY137_01620 PF00288 GHMP kinases N terminal domain FY137_01630 PF00348 Polyprenyl synthetase FY137_01645 PF01343 Peptidase family S49 FY137_01645 PF06965 Na+/H+ antiporter 1 FY137_01665 PF02091 Glycyl-tRNA synthetase alpha subunit FY137_01675 PF04011 LemA family FY137_01680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY137_01690 PF05746 DALR anticodon binding domain FY137_01690 PF02092 Glycyl-tRNA synthetase beta subunit FY137_01695 PF04463 Protein of unknown function (DUF523) FY137_01700 PF00672 HAMP domain FY137_01700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_01710 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY137_01710 PF02844 Phosphoribosylglycinamide synthetase, N domain FY137_01710 PF02843 Phosphoribosylglycinamide synthetase, C domain FY137_01715 PF16921 Tex protein YqgF-like domain FY137_01715 PF09371 Tex-like protein N-terminal domain FY137_01715 PF00575 S1 RNA binding domain FY137_01715 PF17674 HHH domain FY137_01730 PF01040 UbiA prenyltransferase family FY137_01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_01745 PF03466 LysR substrate binding domain FY137_01755 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY137_01760 PF04452 RNA methyltransferase FY137_01765 PF01384 Phosphate transporter family FY137_01775 PF05116 Sucrose-6F-phosphate phosphohydrolase FY137_01780 PF13439 Glycosyltransferase Family 4 FY137_01780 PF00534 Glycosyl transferases group 1 FY137_01785 PF00392 Bacterial regulatory proteins, gntR family FY137_01785 PF07729 FCD domain FY137_01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_01800 PF03466 LysR substrate binding domain FY137_01805 PF01565 FAD binding domain FY137_01805 PF02913 FAD linked oxidases, C-terminal domain FY137_01810 PF02913 FAD linked oxidases, C-terminal domain FY137_01810 PF01565 FAD binding domain FY137_01815 PF02754 Cysteine-rich domain FY137_01815 PF13183 4Fe-4S dicluster domain FY137_01825 PF17969 L,D-transpeptidase C-terminal domain FY137_01825 PF03734 L,D-transpeptidase catalytic domain FY137_01830 PF03352 Methyladenine glycosylase FY137_01840 PF03601 Conserved hypothetical protein 698 FY137_01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_01845 PF03466 LysR substrate binding domain FY137_01875 PF03129 Anticodon binding domain FY137_01875 PF13393 Histidyl-tRNA synthetase FY137_01885 PF13393 Histidyl-tRNA synthetase FY137_01890 PF01634 ATP phosphoribosyltransferase FY137_01895 PF07681 DoxX FY137_01905 PF00118 TCP-1/cpn60 chaperonin family FY137_01910 PF00166 Chaperonin 10 Kd subunit FY137_01920 PF01687 Riboflavin kinase FY137_01920 PF06574 FAD synthetase FY137_01925 PF08264 Anticodon-binding domain of tRNA FY137_01925 PF00133 tRNA synthetases class I (I, L, M and V) FY137_01935 PF14437 MafB19-like deaminase FY137_01940 PF01479 S4 domain FY137_01940 PF00849 RNA pseudouridylate synthase FY137_01950 PF01734 Patatin-like phospholipase FY137_01955 PF02254 TrkA-N domain FY137_01955 PF00999 Sodium/hydrogen exchanger family FY137_01960 PF01523 Putative modulator of DNA gyrase FY137_01965 PF00459 Inositol monophosphatase family FY137_01975 PF00534 Glycosyl transferases group 1 FY137_01975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY137_01985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY137_01995 PF08676 MutL C terminal dimerisation domain FY137_01995 PF01119 DNA mismatch repair protein, C-terminal domain FY137_02000 PF00486 Transcriptional regulatory protein, C terminal FY137_02000 PF00072 Response regulator receiver domain FY137_02005 PF00563 EAL domain FY137_02005 PF00990 Diguanylate cyclase, GGDEF domain FY137_02005 PF03707 Bacterial signalling protein N terminal repeat FY137_02005 PF13188 PAS domain FY137_02010 PF08450 SMP-30/Gluconolactonase/LRE-like region FY137_02015 PF01081 KDPG and KHG aldolase FY137_02020 PF05035 2-keto-3-deoxy-galactonokinase FY137_02030 PF01614 Bacterial transcriptional regulator FY137_02030 PF09339 IclR helix-turn-helix domain FY137_02035 PF03472 Autoinducer binding domain FY137_02035 PF00196 Bacterial regulatory proteins, luxR family FY137_02045 PF10609 NUBPL iron-transfer P-loop NTPase FY137_02050 PF01544 CorA-like Mg2+ transporter protein FY137_02055 PF02705 K+ potassium transporter FY137_02065 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FY137_02070 PF00119 ATP synthase A chain FY137_02075 PF00137 ATP synthase subunit C FY137_02080 PF00430 ATP synthase B/B' CF(0) FY137_02085 PF00430 ATP synthase B/B' CF(0) FY137_02095 PF01351 Ribonuclease HII FY137_02110 PF01565 FAD binding domain FY137_02110 PF02913 FAD linked oxidases, C-terminal domain FY137_02115 PF01300 Telomere recombination FY137_02115 PF03481 Putative GTP-binding controlling metal-binding FY137_02125 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY137_02125 PF00355 Rieske [2Fe-2S] domain FY137_02130 PF00970 Oxidoreductase FAD-binding domain FY137_02130 PF00111 2Fe-2S iron-sulfur cluster binding domain FY137_02130 PF00175 Oxidoreductase NAD-binding domain FY137_02135 PF07886 BA14K-like protein FY137_02140 PF07886 BA14K-like protein FY137_02150 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY137_02150 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_02150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_02150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_02165 PF05958 tRNA (Uracil-5-)-methyltransferase FY137_02170 PF01728 FtsJ-like methyltransferase FY137_02170 PF01479 S4 domain FY137_02175 PF00672 HAMP domain FY137_02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_02185 PF01037 Lrp/AsnC ligand binding domain FY137_02215 PF02780 Transketolase, C-terminal domain FY137_02215 PF02779 Transketolase, pyrimidine binding domain FY137_02215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY137_02220 PF05726 Pirin C-terminal cupin domain FY137_02220 PF02678 Pirin FY137_02225 PF02609 Exonuclease VII small subunit FY137_02230 PF00850 Histone deacetylase domain FY137_02235 PF02632 BioY family FY137_02240 PF02361 Cobalt transport protein FY137_02245 PF00005 ABC transporter FY137_02250 PF06224 Winged helix DNA-binding domain FY137_02255 PF00925 GTP cyclohydrolase II FY137_02255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY137_02260 PF01264 Chorismate synthase FY137_02275 PF00300 Histidine phosphatase superfamily (branch 1) FY137_02285 PF01556 DnaJ C terminal domain FY137_02285 PF00684 DnaJ central domain FY137_02285 PF00226 DnaJ domain FY137_02295 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY137_02295 PF01243 Pyridoxamine 5'-phosphate oxidase FY137_02320 PF13419 Haloacid dehalogenase-like hydrolase FY137_02330 PF01523 Putative modulator of DNA gyrase FY137_02340 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY137_02340 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY137_02345 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY137_02350 PF01040 UbiA prenyltransferase family FY137_02355 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY137_02360 PF00510 Cytochrome c oxidase subunit III FY137_02370 PF02104 SURF1 family FY137_02375 PF02401 LytB protein FY137_02380 PF01636 Phosphotransferase enzyme family FY137_02385 PF00075 RNase H FY137_02400 PF08534 Redoxin FY137_02400 PF00462 Glutaredoxin FY137_02410 PF02622 Uncharacterized ACR, COG1678 FY137_02420 PF10005 zinc-ribbon domain FY137_02420 PF15887 Putative zinc-binding metallo-peptidase FY137_02425 PF00990 Diguanylate cyclase, GGDEF domain FY137_02425 PF03707 Bacterial signalling protein N terminal repeat FY137_02425 PF13188 PAS domain FY137_02425 PF00563 EAL domain FY137_02430 PF13302 Acetyltransferase (GNAT) domain FY137_02435 PF00675 Insulinase (Peptidase family M16) FY137_02435 PF05193 Peptidase M16 inactive domain FY137_02440 PF14821 Threonine synthase N terminus FY137_02440 PF00291 Pyridoxal-phosphate dependent enzyme FY137_02450 PF13419 Haloacid dehalogenase-like hydrolase FY137_02455 PF00392 Bacterial regulatory proteins, gntR family FY137_02455 PF07729 FCD domain FY137_02470 PF18755 Restriction Enzyme Adenine Methylase Associated FY137_02470 PF01555 DNA methylase FY137_02480 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY137_02485 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY137_02495 PF00730 HhH-GPD superfamily base excision DNA repair protein FY137_02495 PF14815 NUDIX domain FY137_02510 PF13462 Thioredoxin FY137_02515 PF02463 RecF/RecN/SMC N terminal domain FY137_02520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_02525 PF00391 PEP-utilising enzyme, mobile domain FY137_02525 PF02896 PEP-utilising enzyme, TIM barrel domain FY137_02525 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY137_02545 PF00375 Sodium:dicarboxylate symporter family FY137_02570 PF06039 Malate:quinone oxidoreductase (Mqo) FY137_02585 PF00009 Elongation factor Tu GTP binding domain FY137_02590 PF01507 Phosphoadenosine phosphosulfate reductase family FY137_02595 PF01507 Phosphoadenosine phosphosulfate reductase family FY137_02600 PF02082 Transcriptional regulator FY137_02610 PF00528 Binding-protein-dependent transport system inner membrane component FY137_02615 PF00528 Binding-protein-dependent transport system inner membrane component FY137_02620 PF00005 ABC transporter FY137_02620 PF12857 TOBE-like domain FY137_02635 PF08240 Alcohol dehydrogenase GroES-like domain FY137_02635 PF00698 Acyl transferase domain FY137_02635 PF00550 Phosphopantetheine attachment site FY137_02635 PF08659 KR domain FY137_02635 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_02635 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_02635 PF16197 Ketoacyl-synthetase C-terminal extension FY137_02635 PF00107 Zinc-binding dehydrogenase FY137_02635 PF14765 Polyketide synthase dehydratase FY137_02640 PF00990 Diguanylate cyclase, GGDEF domain FY137_02640 PF00989 PAS fold FY137_02640 PF00563 EAL domain FY137_02640 PF01590 GAF domain FY137_02655 PF13977 BetI-type transcriptional repressor, C-terminal FY137_02655 PF00440 Bacterial regulatory proteins, tetR family FY137_02660 PF00171 Aldehyde dehydrogenase family FY137_02665 PF05199 GMC oxidoreductase FY137_02665 PF00732 GMC oxidoreductase FY137_02680 PF00654 Voltage gated chloride channel FY137_02710 PF07690 Major Facilitator Superfamily FY137_02720 PF01068 ATP dependent DNA ligase domain FY137_02720 PF04679 ATP dependent DNA ligase C terminal region FY137_02720 PF04675 DNA ligase N terminus FY137_02730 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY137_02735 PF00403 Heavy-metal-associated domain FY137_02740 PF17969 L,D-transpeptidase C-terminal domain FY137_02740 PF03734 L,D-transpeptidase catalytic domain FY137_02745 PF17969 L,D-transpeptidase C-terminal domain FY137_02745 PF03734 L,D-transpeptidase catalytic domain FY137_02750 PF01047 MarR family FY137_02755 PF02566 OsmC-like protein FY137_02770 PF12848 ABC transporter FY137_02770 PF00005 ABC transporter FY137_02800 PF03466 LysR substrate binding domain FY137_02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_02805 PF00106 short chain dehydrogenase FY137_02820 PF05872 Bacterial protein of unknown function (DUF853) FY137_02830 PF01638 HxlR-like helix-turn-helix FY137_02840 PF12833 Helix-turn-helix domain FY137_02850 PF00248 Aldo/keto reductase family FY137_02855 PF01062 Bestrophin, RFP-TM, chloride channel FY137_02860 PF13280 WYL domain FY137_02860 PF08279 HTH domain FY137_02875 PF01063 Amino-transferase class IV FY137_02880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_02880 PF00672 HAMP domain FY137_02885 PF03466 LysR substrate binding domain FY137_02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_02900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY137_02900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY137_02915 PF01810 LysE type translocator FY137_02920 PF01322 Cytochrome C' FY137_02925 PF00034 Cytochrome c FY137_02955 PF09278 MerR, DNA binding FY137_02955 PF00376 MerR family regulatory protein FY137_02965 PF02583 Metal-sensitive transcriptional repressor FY137_02980 PF00571 CBS domain FY137_02980 PF00005 ABC transporter FY137_02985 PF00528 Binding-protein-dependent transport system inner membrane component FY137_02995 PF00326 Prolyl oligopeptidase family FY137_02995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY137_03005 PF00701 Dihydrodipicolinate synthetase family FY137_03015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY137_03015 PF02805 Metal binding domain of Ada FY137_03015 PF12833 Helix-turn-helix domain FY137_03015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY137_03020 PF01594 AI-2E family transporter FY137_03025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_03045 PF03006 Haemolysin-III related FY137_03055 PF01810 LysE type translocator FY137_03060 PF01641 SelR domain FY137_03065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY137_03065 PF13244 Domain of unknown function (DUF4040) FY137_03065 PF00361 Proton-conducting membrane transporter FY137_03070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY137_03075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY137_03080 PF00361 Proton-conducting membrane transporter FY137_03085 PF01899 Na+/H+ ion antiporter subunit FY137_03090 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY137_03095 PF03334 Na+/H+ antiporter subunit FY137_03100 PF05443 ROS/MUCR transcriptional regulator protein FY137_03115 PF02657 Fe-S metabolism associated domain FY137_03120 PF17264 Family of unknown function (DUF5330) FY137_03125 PF00512 His Kinase A (phospho-acceptor) domain FY137_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_03165 PF01810 LysE type translocator FY137_03170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_03170 PF03466 LysR substrate binding domain FY137_03175 PF00912 Transglycosylase FY137_03175 PF00905 Penicillin binding protein transpeptidase domain FY137_03180 PF03692 Putative zinc- or iron-chelating domain FY137_03185 PF00905 Penicillin binding protein transpeptidase domain FY137_03190 PF01209 ubiE/COQ5 methyltransferase family FY137_03195 PF00403 Heavy-metal-associated domain FY137_03200 PF09278 MerR, DNA binding FY137_03200 PF00376 MerR family regulatory protein FY137_03220 PF07690 Major Facilitator Superfamily FY137_03230 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY137_03240 PF01037 Lrp/AsnC ligand binding domain FY137_03240 PF13404 AsnC-type helix-turn-helix domain FY137_03280 PF04860 Phage portal protein FY137_03380 PF00072 Response regulator receiver domain FY137_03380 PF00486 Transcriptional regulatory protein, C terminal FY137_03385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_03400 PF03100 CcmE FY137_03405 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY137_03405 PF01578 Cytochrome C assembly protein FY137_03410 PF03918 Cytochrome C biogenesis protein FY137_03415 PF13180 PDZ domain FY137_03420 PF00072 Response regulator receiver domain FY137_03420 PF00486 Transcriptional regulatory protein, C terminal FY137_03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_03425 PF00512 His Kinase A (phospho-acceptor) domain FY137_03430 PF04134 Protein of unknown function, DUF393 FY137_03445 PF08335 GlnD PII-uridylyltransferase FY137_03445 PF03710 Glutamate-ammonia ligase adenylyltransferase FY137_03450 PF00512 His Kinase A (phospho-acceptor) domain FY137_03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_03450 PF00989 PAS fold FY137_03460 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY137_03460 PF01433 Peptidase family M1 domain FY137_03460 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY137_03465 PF00892 EamA-like transporter family FY137_03480 PF00012 Hsp70 protein FY137_03485 PF00990 Diguanylate cyclase, GGDEF domain FY137_03505 PF03796 DnaB-like helicase C terminal domain FY137_03515 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY137_03515 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY137_03530 PF08240 Alcohol dehydrogenase GroES-like domain FY137_03530 PF00107 Zinc-binding dehydrogenase FY137_03535 PF01638 HxlR-like helix-turn-helix FY137_03540 PF02673 Bacitracin resistance protein BacA FY137_03545 PF00571 CBS domain FY137_03545 PF01769 Divalent cation transporter FY137_03545 PF03448 MgtE intracellular N domain FY137_03550 PF07690 Major Facilitator Superfamily FY137_03555 PF00781 Diacylglycerol kinase catalytic domain FY137_03560 PF00202 Aminotransferase class-III FY137_03570 PF09957 Bacterial antitoxin of type II TA system, VapB FY137_03575 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY137_03575 PF01048 Phosphorylase superfamily FY137_03600 PF00155 Aminotransferase class I and II FY137_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_03610 PF14759 Reductase C-terminal FY137_03615 PF03328 HpcH/HpaI aldolase/citrate lyase family FY137_03635 PF05050 Methyltransferase FkbM domain FY137_03640 PF02530 Porin subfamily FY137_03645 PF02530 Porin subfamily FY137_03650 PF01464 Transglycosylase SLT domain FY137_03650 PF14718 Soluble lytic murein transglycosylase L domain FY137_03655 PF00701 Dihydrodipicolinate synthetase family FY137_03660 PF01668 SmpB protein FY137_03665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_03665 PF00672 HAMP domain FY137_03675 PF01192 RNA polymerase Rpb6 FY137_03680 PF04607 Region found in RelA / SpoT proteins FY137_03680 PF13291 ACT domain FY137_03680 PF02824 TGS domain FY137_03695 PF01648 4'-phosphopantetheinyl transferase superfamily FY137_03700 PF10502 Signal peptidase, peptidase S26 FY137_03705 PF00035 Double-stranded RNA binding motif FY137_03705 PF14622 Ribonuclease-III-like FY137_03710 PF07650 KH domain FY137_03710 PF01926 50S ribosome-binding GTPase FY137_03715 PF13545 Crp-like helix-turn-helix domain FY137_03715 PF00027 Cyclic nucleotide-binding domain FY137_03720 PF00072 Response regulator receiver domain FY137_03725 PF11967 Recombination protein O N terminal FY137_03725 PF02565 Recombination protein O C terminal FY137_03730 PF07690 Major Facilitator Superfamily FY137_03735 PF13649 Methyltransferase domain FY137_03745 PF01966 HD domain FY137_03755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_03765 PF00005 ABC transporter FY137_03770 PF00528 Binding-protein-dependent transport system inner membrane component FY137_03780 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY137_03785 PF00924 Mechanosensitive ion channel FY137_03785 PF05552 Conserved TM helix FY137_03795 PF01966 HD domain FY137_03800 PF01571 Aminomethyltransferase folate-binding domain FY137_03820 PF00293 NUDIX domain FY137_03825 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY137_03835 PF00990 Diguanylate cyclase, GGDEF domain FY137_03835 PF00072 Response regulator receiver domain FY137_03840 PF01066 CDP-alcohol phosphatidyltransferase FY137_03845 PF02666 Phosphatidylserine decarboxylase FY137_03850 PF00005 ABC transporter FY137_03850 PF00664 ABC transporter transmembrane region FY137_03860 PF03641 Possible lysine decarboxylase FY137_03865 PF03717 Penicillin-binding Protein dimerisation domain FY137_03865 PF00905 Penicillin binding protein transpeptidase domain FY137_03870 PF00892 EamA-like transporter family FY137_03875 PF00561 alpha/beta hydrolase fold FY137_03895 PF04480 Protein of unknown function (DUF559) FY137_03900 PF01406 tRNA synthetases class I (C) catalytic domain FY137_03900 PF09190 DALR domain FY137_03905 PF00106 short chain dehydrogenase FY137_03910 PF00156 Phosphoribosyl transferase domain FY137_03910 PF13537 Glutamine amidotransferase domain FY137_03915 PF02674 Colicin V production protein FY137_03920 PF06745 KaiC FY137_03920 PF18073 Rubredoxin metal binding domain FY137_03935 PF00842 Alanine racemase, C-terminal domain FY137_03935 PF01168 Alanine racemase, N-terminal domain FY137_03940 PF12852 Cupin FY137_03940 PF12833 Helix-turn-helix domain FY137_03945 PF03591 AzlC protein FY137_03955 PF00664 ABC transporter transmembrane region FY137_03955 PF00005 ABC transporter FY137_03960 PF03796 DnaB-like helicase C terminal domain FY137_03960 PF00772 DnaB-like helicase N terminal domain FY137_03975 PF13533 Biotin-lipoyl like FY137_03980 PF03948 Ribosomal protein L9, C-terminal domain FY137_03980 PF01281 Ribosomal protein L9, N-terminal domain FY137_03990 PF01084 Ribosomal protein S18 FY137_03995 PF01250 Ribosomal protein S6 FY137_04000 PF00248 Aldo/keto reductase family FY137_04005 PF00698 Acyl transferase domain FY137_04015 PF00550 Phosphopantetheine attachment site FY137_04020 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_04020 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_04025 PF02618 YceG-like family FY137_04030 PF08340 Domain of unknown function (DUF1732) FY137_04030 PF03755 YicC-like family, N-terminal region FY137_04035 PF00625 Guanylate kinase FY137_04045 PF01850 PIN domain FY137_04050 PF01738 Dienelactone hydrolase family FY137_04055 PF00398 Ribosomal RNA adenine dimethylase FY137_04060 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY137_04070 PF03968 OstA-like protein FY137_04070 PF04453 LPS transport system D FY137_04085 PF00883 Cytosol aminopeptidase family, catalytic domain FY137_04085 PF02789 Cytosol aminopeptidase family, N-terminal domain FY137_04095 PF00563 EAL domain FY137_04095 PF00990 Diguanylate cyclase, GGDEF domain FY137_04095 PF03707 Bacterial signalling protein N terminal repeat FY137_04100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_04105 PF00563 EAL domain FY137_04105 PF01590 GAF domain FY137_04105 PF00990 Diguanylate cyclase, GGDEF domain FY137_04105 PF00360 Phytochrome region FY137_04110 PF00990 Diguanylate cyclase, GGDEF domain FY137_04110 PF00563 EAL domain FY137_04110 PF03707 Bacterial signalling protein N terminal repeat FY137_04115 PF12848 ABC transporter FY137_04115 PF00005 ABC transporter FY137_04120 PF17158 Membrane-associated sensor, integral membrane domain FY137_04120 PF00990 Diguanylate cyclase, GGDEF domain FY137_04125 PF13417 Glutathione S-transferase, N-terminal domain FY137_04130 PF00334 Nucleoside diphosphate kinase FY137_04150 PF02391 MoaE protein FY137_04160 PF01066 CDP-alcohol phosphatidyltransferase FY137_04165 PF08459 UvrC Helix-hairpin-helix N-terminal FY137_04165 PF01541 GIY-YIG catalytic domain FY137_04165 PF02151 UvrB/uvrC motif FY137_04175 PF13505 Outer membrane protein beta-barrel domain FY137_04180 PF13417 Glutathione S-transferase, N-terminal domain FY137_04180 PF00043 Glutathione S-transferase, C-terminal domain FY137_04185 PF00445 Ribonuclease T2 family FY137_04195 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY137_04200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY137_04200 PF00384 Molybdopterin oxidoreductase FY137_04200 PF01568 Molydopterin dinucleotide binding domain FY137_04205 PF00293 NUDIX domain FY137_04225 PF00551 Formyl transferase FY137_04230 PF00586 AIR synthase related protein, N-terminal domain FY137_04230 PF02769 AIR synthase related protein, C-terminal domain FY137_04240 PF01594 AI-2E family transporter FY137_04250 PF17941 Polyphosphate kinase C-terminal domain 1 FY137_04250 PF13089 Polyphosphate kinase N-terminal domain FY137_04250 PF02503 Polyphosphate kinase middle domain FY137_04250 PF13090 Polyphosphate kinase C-terminal domain 2 FY137_04255 PF02541 Ppx/GppA phosphatase family FY137_04260 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_04280 PF00211 Adenylate and Guanylate cyclase catalytic domain FY137_04290 PF01612 3'-5' exonuclease FY137_04290 PF00570 HRDC domain FY137_04295 PF07690 Major Facilitator Superfamily FY137_04300 PF00152 tRNA synthetases class II (D, K and N) FY137_04300 PF02938 GAD domain FY137_04300 PF01336 OB-fold nucleic acid binding domain FY137_04305 PF06123 Inner membrane protein CreD FY137_04310 PF00672 HAMP domain FY137_04310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_04315 PF01740 STAS domain FY137_04315 PF00916 Sulfate permease family FY137_04325 PF03989 DNA gyrase C-terminal domain, beta-propeller FY137_04325 PF00521 DNA gyrase/topoisomerase IV, subunit A FY137_04335 PF04377 Arginine-tRNA-protein transferase, C terminus FY137_04335 PF04376 Arginine-tRNA-protein transferase, N terminus FY137_04345 PF00490 Delta-aminolevulinic acid dehydratase FY137_04370 PF00464 Serine hydroxymethyltransferase FY137_04375 PF03477 ATP cone domain FY137_04380 PF01872 RibD C-terminal domain FY137_04380 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY137_04385 PF00677 Lumazine binding domain FY137_04390 PF01810 LysE type translocator FY137_04395 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY137_04400 PF01029 NusB family FY137_04405 PF07690 Major Facilitator Superfamily FY137_04410 PF03030 Inorganic H+ pyrophosphatase FY137_04430 PF02504 Fatty acid synthesis protein FY137_04435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY137_04435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY137_04440 PF00216 Bacterial DNA-binding protein FY137_04445 PF13411 MerR HTH family regulatory protein FY137_04460 PF00403 Heavy-metal-associated domain FY137_04465 PF00111 2Fe-2S iron-sulfur cluster binding domain FY137_04465 PF00175 Oxidoreductase NAD-binding domain FY137_04465 PF00970 Oxidoreductase FAD-binding domain FY137_04470 PF00376 MerR family regulatory protein FY137_04470 PF09278 MerR, DNA binding FY137_04475 PF00528 Binding-protein-dependent transport system inner membrane component FY137_04480 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_04480 PF00528 Binding-protein-dependent transport system inner membrane component FY137_04485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_04485 PF00005 ABC transporter FY137_04490 PF00005 ABC transporter FY137_04490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_04495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_04505 PF02386 Cation transport protein FY137_04510 PF00291 Pyridoxal-phosphate dependent enzyme FY137_04510 PF00585 C-terminal regulatory domain of Threonine dehydratase FY137_04520 PF00990 Diguanylate cyclase, GGDEF domain FY137_04525 PF02525 Flavodoxin-like fold FY137_04530 PF03466 LysR substrate binding domain FY137_04530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_04540 PF00149 Calcineurin-like phosphoesterase FY137_04540 PF02872 5'-nucleotidase, C-terminal domain FY137_04560 PF00581 Rhodanese-like domain FY137_04565 PF02272 DHHA1 domain FY137_04565 PF01411 tRNA synthetases class II (A) FY137_04565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY137_04570 PF00291 Pyridoxal-phosphate dependent enzyme FY137_04570 PF00571 CBS domain FY137_04575 PF03441 FAD binding domain of DNA photolyase FY137_04575 PF00875 DNA photolyase FY137_04585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY137_04585 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY137_04615 PF06055 Exopolysaccharide synthesis, ExoD FY137_04620 PF09335 SNARE associated Golgi protein FY137_04635 PF01032 FecCD transport family FY137_04640 PF00005 ABC transporter FY137_04645 PF00127 Copper binding proteins, plastocyanin/azurin family FY137_04650 PF00210 Ferritin-like domain FY137_04685 PF02397 Bacterial sugar transferase FY137_04690 PF00534 Glycosyl transferases group 1 FY137_04715 PF02628 Cytochrome oxidase assembly protein FY137_04720 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY137_04725 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY137_04730 PF00491 Arginase family FY137_04735 PF00380 Ribosomal protein S9/S16 FY137_04740 PF00572 Ribosomal protein L13 FY137_04750 PF13380 CoA binding domain FY137_04755 PF01053 Cys/Met metabolism PLP-dependent enzyme FY137_04760 PF01047 MarR family FY137_04780 PF00067 Cytochrome P450 FY137_04785 PF17151 Periplasmic sensor domain FY137_04785 PF00990 Diguanylate cyclase, GGDEF domain FY137_04790 PF00574 Clp protease FY137_04795 PF07724 AAA domain (Cdc48 subfamily) FY137_04795 PF06689 ClpX C4-type zinc finger FY137_04795 PF10431 C-terminal, D2-small domain, of ClpB protein FY137_04800 PF00004 ATPase family associated with various cellular activities (AAA) FY137_04800 PF05362 Lon protease (S16) C-terminal proteolytic domain FY137_04800 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY137_04805 PF00216 Bacterial DNA-binding protein FY137_04810 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY137_04835 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY137_04840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY137_04845 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY137_04855 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY137_04870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY137_04870 PF10531 SLBB domain FY137_04870 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY137_04875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY137_04875 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY137_04875 PF00384 Molybdopterin oxidoreductase FY137_04880 PF00146 NADH dehydrogenase FY137_04885 PF12838 4Fe-4S dicluster domain FY137_04890 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY137_04895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY137_04900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY137_04900 PF00361 Proton-conducting membrane transporter FY137_04905 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY137_04905 PF00361 Proton-conducting membrane transporter FY137_04910 PF00361 Proton-conducting membrane transporter FY137_04915 PF08279 HTH domain FY137_04915 PF02237 Biotin protein ligase C terminal domain FY137_04915 PF03099 Biotin/lipoate A/B protein ligase family FY137_04920 PF17770 Ribonuclease J C-terminal domain FY137_04920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY137_04920 PF12706 Beta-lactamase superfamily domain FY137_04930 PF03129 Anticodon binding domain FY137_04930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY137_04935 PF02687 FtsX-like permease family FY137_04935 PF12704 MacB-like periplasmic core domain FY137_04940 PF00005 ABC transporter FY137_04945 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY137_04945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY137_04945 PF02811 PHP domain FY137_04945 PF14579 Helix-hairpin-helix motif FY137_04955 PF00817 impB/mucB/samB family FY137_04955 PF11799 impB/mucB/samB family C-terminal domain FY137_04975 PF00072 Response regulator receiver domain FY137_04980 PF00072 Response regulator receiver domain FY137_04980 PF00990 Diguanylate cyclase, GGDEF domain FY137_04985 PF00471 Ribosomal protein L33 FY137_04990 PF07690 Major Facilitator Superfamily FY137_05005 PF00773 RNB domain FY137_05005 PF08206 Ribonuclease B OB domain FY137_05005 PF00575 S1 RNA binding domain FY137_05005 PF08461 Ribonuclease R winged-helix domain FY137_05005 PF17876 Cold shock domain FY137_05010 PF01396 Topoisomerase DNA binding C4 zinc finger FY137_05010 PF01131 DNA topoisomerase FY137_05010 PF01751 Toprim domain FY137_05010 PF13368 Topoisomerase C-terminal repeat FY137_05020 PF17782 DprA winged helix domain FY137_05020 PF02481 DNA recombination-mediator protein A FY137_05025 PF02660 Glycerol-3-phosphate acyltransferase FY137_05030 PF01979 Amidohydrolase family FY137_05035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY137_05035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY137_05045 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_05045 PF18158 Adaptive response protein AidB N-terminal domain FY137_05045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_05050 PF00583 Acetyltransferase (GNAT) family FY137_05075 PF03652 Holliday junction resolvase FY137_05080 PF03831 PhnA domain FY137_05080 PF08274 PhnA Zinc-Ribbon FY137_05090 PF02686 Glu-tRNAGln amidotransferase C subunit FY137_05095 PF01425 Amidase FY137_05100 PF13673 Acetyltransferase (GNAT) domain FY137_05100 PF00583 Acetyltransferase (GNAT) family FY137_05105 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY137_05120 PF02934 GatB/GatE catalytic domain FY137_05120 PF02637 GatB domain FY137_05130 PF00583 Acetyltransferase (GNAT) family FY137_05150 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY137_05155 PF02785 Biotin carboxylase C-terminal domain FY137_05155 PF00289 Biotin carboxylase, N-terminal domain FY137_05155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_05160 PF00364 Biotin-requiring enzyme FY137_05165 PF01220 Dehydroquinase class II FY137_05170 PF13462 Thioredoxin FY137_05170 PF06965 Na+/H+ antiporter 1 FY137_05175 PF00155 Aminotransferase class I and II FY137_05200 PF12111 Polyribonucleotide phosphorylase C terminal FY137_05200 PF10150 Ribonuclease E/G family FY137_05200 PF00575 S1 RNA binding domain FY137_05205 PF01520 N-acetylmuramoyl-L-alanine amidase FY137_05210 PF00905 Penicillin binding protein transpeptidase domain FY137_05210 PF17092 Penicillin-binding protein OB-like domain FY137_05210 PF00912 Transglycosylase FY137_05230 PF01513 ATP-NAD kinase FY137_05235 PF02567 Phenazine biosynthesis-like protein FY137_05250 PF00111 2Fe-2S iron-sulfur cluster binding domain FY137_05260 PF00809 Pterin binding enzyme FY137_05265 PF02152 Dihydroneopterin aldolase FY137_05270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY137_05280 PF05128 Domain of unknown function (DUF697) FY137_05285 PF04317 YcjX-like family, DUF463 FY137_05295 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY137_05310 PF00072 Response regulator receiver domain FY137_05310 PF13188 PAS domain FY137_05310 PF00512 His Kinase A (phospho-acceptor) domain FY137_05310 PF08448 PAS fold FY137_05310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_05315 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY137_05320 PF00004 ATPase family associated with various cellular activities (AAA) FY137_05320 PF07724 AAA domain (Cdc48 subfamily) FY137_05320 PF17871 AAA lid domain FY137_05320 PF02861 Clp amino terminal domain, pathogenicity island component FY137_05320 PF10431 C-terminal, D2-small domain, of ClpB protein FY137_05335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_05335 PF03466 LysR substrate binding domain FY137_05345 PF01230 HIT domain FY137_05370 PF00318 Ribosomal protein S2 FY137_05375 PF00889 Elongation factor TS FY137_05380 PF00696 Amino acid kinase family FY137_05385 PF01765 Ribosome recycling factor FY137_05390 PF01255 Putative undecaprenyl diphosphate synthase FY137_05400 PF17820 PDZ domain FY137_05400 PF02163 Peptidase family M50 FY137_05405 PF01103 Surface antigen FY137_05405 PF07244 Surface antigen variable number repeat FY137_05410 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY137_05410 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_05415 PF07977 FabA-like domain FY137_05420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY137_05420 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_05425 PF06230 LpxI C-terminal domain FY137_05425 PF17930 LpxI N-terminal domain FY137_05430 PF02684 Lipid-A-disaccharide synthetase FY137_05435 PF07729 FCD domain FY137_05435 PF00392 Bacterial regulatory proteins, gntR family FY137_05440 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_05445 PF00528 Binding-protein-dependent transport system inner membrane component FY137_05450 PF00528 Binding-protein-dependent transport system inner membrane component FY137_05455 PF00005 ABC transporter FY137_05460 PF00285 Citrate synthase, C-terminal domain FY137_05475 PF00717 Peptidase S24-like FY137_05475 PF01726 LexA DNA binding domain FY137_05480 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_05485 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_05485 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY137_05490 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_05490 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY137_05495 PF02779 Transketolase, pyrimidine binding domain FY137_05495 PF02780 Transketolase, C-terminal domain FY137_05500 PF00456 Transketolase, thiamine diphosphate binding domain FY137_05510 PF03466 LysR substrate binding domain FY137_05510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_05520 PF02733 Dak1 domain FY137_05525 PF02734 DAK2 domain FY137_05530 PF02502 Ribose/Galactose Isomerase FY137_05540 PF00793 DAHP synthetase I family FY137_05545 PF00113 Enolase, C-terminal TIM barrel domain FY137_05545 PF03952 Enolase, N-terminal domain FY137_05555 PF00676 Dehydrogenase E1 component FY137_05560 PF00364 Biotin-requiring enzyme FY137_05560 PF02779 Transketolase, pyrimidine binding domain FY137_05560 PF02780 Transketolase, C-terminal domain FY137_05565 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY137_05565 PF00364 Biotin-requiring enzyme FY137_05565 PF02817 e3 binding domain FY137_05575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_05575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY137_05585 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY137_05585 PF04055 Radical SAM superfamily FY137_05590 PF00892 EamA-like transporter family FY137_05605 PF03364 Polyketide cyclase / dehydrase and lipid transport FY137_05610 PF02464 Competence-damaged protein FY137_05615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY137_05615 PF02542 YgbB family FY137_05620 PF01207 Dihydrouridine synthase (Dus) FY137_05625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_05625 PF00512 His Kinase A (phospho-acceptor) domain FY137_05625 PF00989 PAS fold FY137_05630 PF02954 Bacterial regulatory protein, Fis family FY137_05630 PF00072 Response regulator receiver domain FY137_05630 PF00158 Sigma-54 interaction domain FY137_05635 PF00989 PAS fold FY137_05635 PF00672 HAMP domain FY137_05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_05635 PF00512 His Kinase A (phospho-acceptor) domain FY137_05640 PF02954 Bacterial regulatory protein, Fis family FY137_05640 PF00158 Sigma-54 interaction domain FY137_05640 PF00072 Response regulator receiver domain FY137_05645 PF02254 TrkA-N domain FY137_05645 PF02080 TrkA-C domain FY137_05650 PF17209 Hfq protein FY137_05655 PF16360 GTP-binding GTPase Middle Region FY137_05655 PF13167 GTP-binding GTPase N-terminal FY137_05655 PF01926 50S ribosome-binding GTPase FY137_05660 PF03819 MazG nucleotide pyrophosphohydrolase domain FY137_05670 PF14824 Sirohaem biosynthesis protein central FY137_05670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_05670 PF10414 Sirohaem synthase dimerisation region FY137_05690 PF00970 Oxidoreductase FAD-binding domain FY137_05690 PF00175 Oxidoreductase NAD-binding domain FY137_05710 PF02347 Glycine cleavage system P-protein FY137_05715 PF01597 Glycine cleavage H-protein FY137_05720 PF01571 Aminomethyltransferase folate-binding domain FY137_05720 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY137_05745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY137_05750 PF01479 S4 domain FY137_05750 PF00849 RNA pseudouridylate synthase FY137_05755 PF13419 Haloacid dehalogenase-like hydrolase FY137_05770 PF01042 Endoribonuclease L-PSP FY137_05775 PF00756 Putative esterase FY137_05785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY137_05800 PF00578 AhpC/TSA family FY137_05800 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY137_05810 PF02798 Glutathione S-transferase, N-terminal domain FY137_05810 PF00043 Glutathione S-transferase, C-terminal domain FY137_05815 PF00583 Acetyltransferase (GNAT) family FY137_05825 PF13458 Periplasmic binding protein FY137_05830 PF02653 Branched-chain amino acid transport system / permease component FY137_05835 PF02653 Branched-chain amino acid transport system / permease component FY137_05840 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_05840 PF00005 ABC transporter FY137_05845 PF00005 ABC transporter FY137_05850 PF00155 Aminotransferase class I and II FY137_05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_05855 PF03466 LysR substrate binding domain FY137_05860 PF05378 Hydantoinase/oxoprolinase N-terminal region FY137_05860 PF01968 Hydantoinase/oxoprolinase FY137_05875 PF03328 HpcH/HpaI aldolase/citrate lyase family FY137_05895 PF08281 Sigma-70, region 4 FY137_05895 PF04542 Sigma-70 region 2 FY137_05910 PF03358 NADPH-dependent FMN reductase FY137_05915 PF03960 ArsC family FY137_05920 PF01758 Sodium Bile acid symporter family FY137_05925 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY137_05950 PF00550 Phosphopantetheine attachment site FY137_05950 PF08659 KR domain FY137_05950 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_05950 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_05950 PF16197 Ketoacyl-synthetase C-terminal extension FY137_05950 PF08240 Alcohol dehydrogenase GroES-like domain FY137_05950 PF00698 Acyl transferase domain FY137_05950 PF14765 Polyketide synthase dehydratase FY137_05955 PF14765 Polyketide synthase dehydratase FY137_05955 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_05955 PF00698 Acyl transferase domain FY137_05955 PF08240 Alcohol dehydrogenase GroES-like domain FY137_05955 PF16197 Ketoacyl-synthetase C-terminal extension FY137_05955 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_05955 PF08659 KR domain FY137_05955 PF00550 Phosphopantetheine attachment site FY137_05965 PF00795 Carbon-nitrogen hydrolase FY137_05970 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY137_05970 PF01648 4'-phosphopantetheinyl transferase superfamily FY137_05975 PF00873 AcrB/AcrD/AcrF family FY137_05980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_05990 PF00654 Voltage gated chloride channel FY137_05995 PF12706 Beta-lactamase superfamily domain FY137_05995 PF03099 Biotin/lipoate A/B protein ligase family FY137_06000 PF01026 TatD related DNase FY137_06005 PF08264 Anticodon-binding domain of tRNA FY137_06005 PF09334 tRNA synthetases class I (M) FY137_06010 PF09115 DNA polymerase III, delta subunit, C terminal FY137_06015 PF02223 Thymidylate kinase FY137_06020 PF00768 D-alanyl-D-alanine carboxypeptidase FY137_06020 PF07943 Penicillin-binding protein 5, C-terminal domain FY137_06025 PF05036 Sporulation related domain FY137_06025 PF03330 Lytic transglycolase FY137_06080 PF03354 Phage Terminase FY137_06105 PF00589 Phage integrase family FY137_06105 PF13356 Arm DNA-binding domain FY137_06135 PF00521 DNA gyrase/topoisomerase IV, subunit A FY137_06135 PF03989 DNA gyrase C-terminal domain, beta-propeller FY137_06140 PF01914 MarC family integral membrane protein FY137_06145 PF01743 Poly A polymerase head domain FY137_06145 PF00571 CBS domain FY137_06155 PF00436 Single-strand binding protein family FY137_06160 PF17760 UvrA interaction domain FY137_06160 PF17755 UvrA DNA-binding domain FY137_06175 PF01207 Dihydrouridine synthase (Dus) FY137_06180 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY137_06185 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_06195 PF00950 ABC 3 transport family FY137_06200 PF00005 ABC transporter FY137_06205 PF01297 Zinc-uptake complex component A periplasmic FY137_06210 PF00356 Bacterial regulatory proteins, lacI family FY137_06220 PF00248 Aldo/keto reductase family FY137_06230 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY137_06230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY137_06235 PF03597 Cytochrome oxidase maturation protein cbb3-type FY137_06245 PF05751 FixH FY137_06250 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY137_06250 PF13746 4Fe-4S dicluster domain FY137_06250 PF12801 4Fe-4S binding domain FY137_06265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY137_06265 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY137_06280 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY137_06285 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY137_06300 PF00376 MerR family regulatory protein FY137_06300 PF09278 MerR, DNA binding FY137_06305 PF00571 CBS domain FY137_06305 PF03448 MgtE intracellular N domain FY137_06305 PF01769 Divalent cation transporter FY137_06310 PF00384 Molybdopterin oxidoreductase FY137_06320 PF01327 Polypeptide deformylase FY137_06330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_06330 PF00512 His Kinase A (phospho-acceptor) domain FY137_06330 PF00989 PAS fold FY137_06340 PF03099 Biotin/lipoate A/B protein ligase family FY137_06345 PF00107 Zinc-binding dehydrogenase FY137_06345 PF08240 Alcohol dehydrogenase GroES-like domain FY137_06370 PF07549 SecD/SecF GG Motif FY137_06370 PF02355 Protein export membrane protein FY137_06375 PF02699 Preprotein translocase subunit FY137_06385 PF08240 Alcohol dehydrogenase GroES-like domain FY137_06385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY137_06390 PF00440 Bacterial regulatory proteins, tetR family FY137_06395 PF00067 Cytochrome P450 FY137_06405 PF06426 Serine acetyltransferase, N-terminal FY137_06405 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_06410 PF00561 alpha/beta hydrolase fold FY137_06420 PF01494 FAD binding domain FY137_06425 PF01053 Cys/Met metabolism PLP-dependent enzyme FY137_06430 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_06435 PF00528 Binding-protein-dependent transport system inner membrane component FY137_06440 PF00528 Binding-protein-dependent transport system inner membrane component FY137_06445 PF00005 ABC transporter FY137_06460 PF17768 RecJ OB domain FY137_06460 PF01368 DHH family FY137_06460 PF02272 DHHA1 domain FY137_06470 PF01842 ACT domain FY137_06470 PF00742 Homoserine dehydrogenase FY137_06470 PF03447 Homoserine dehydrogenase, NAD binding domain FY137_06475 PF00155 Aminotransferase class I and II FY137_06480 PF01156 Inosine-uridine preferring nucleoside hydrolase FY137_06485 PF01925 Sulfite exporter TauE/SafE FY137_06500 PF08240 Alcohol dehydrogenase GroES-like domain FY137_06500 PF00107 Zinc-binding dehydrogenase FY137_06505 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_06505 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_06510 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_06510 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_06515 PF07977 FabA-like domain FY137_06520 PF00550 Phosphopantetheine attachment site FY137_06525 PF04055 Radical SAM superfamily FY137_06530 PF00027 Cyclic nucleotide-binding domain FY137_06530 PF13545 Crp-like helix-turn-helix domain FY137_06540 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY137_06545 PF03749 Sugar fermentation stimulation protein RE domain FY137_06545 PF17746 SfsA N-terminal OB domain FY137_06550 PF00557 Metallopeptidase family M24 FY137_06555 PF04002 RadC-like JAB domain FY137_06570 PF01474 Class-II DAHP synthetase family FY137_06575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_06575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY137_06585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY137_06590 PF13419 Haloacid dehalogenase-like hydrolase FY137_06605 PF10415 Fumarase C C-terminus FY137_06605 PF00206 Lyase FY137_06615 PF00117 Glutamine amidotransferase class-I FY137_06615 PF06418 CTP synthase N-terminus FY137_06620 PF03840 Preprotein translocase SecG subunit FY137_06625 PF00121 Triosephosphate isomerase FY137_06635 PF01751 Toprim domain FY137_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_06635 PF00204 DNA gyrase B FY137_06635 PF00986 DNA gyrase B subunit, carboxyl terminus FY137_06655 PF13018 Extended Signal Peptide of Type V secretion system FY137_06655 PF13332 Hemagglutinin repeat FY137_06655 PF05860 haemagglutination activity domain FY137_06655 PF05594 Haemagluttinin repeat FY137_06695 PF00574 Clp protease FY137_06705 PF01022 Bacterial regulatory protein, arsR family FY137_06710 PF13091 PLD-like domain FY137_06715 PF00072 Response regulator receiver domain FY137_06720 PF01266 FAD dependent oxidoreductase FY137_06720 PF01571 Aminomethyltransferase folate-binding domain FY137_06720 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY137_06720 PF16350 FAD dependent oxidoreductase central domain FY137_06740 PF12795 Mechanosensitive ion channel porin domain FY137_06740 PF00924 Mechanosensitive ion channel FY137_06740 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY137_06850 PF00565 Staphylococcal nuclease homologue FY137_06925 PF06381 Protein of unknown function (DUF1073) FY137_06975 PF00308 Bacterial dnaA protein FY137_06975 PF08299 Bacterial dnaA protein helix-turn-helix FY137_06975 PF11638 DnaA N-terminal domain FY137_06985 PF00145 C-5 cytosine-specific DNA methylase FY137_07135 PF00533 BRCA1 C Terminus (BRCT) domain FY137_07135 PF01653 NAD-dependent DNA ligase adenylation domain FY137_07135 PF03120 NAD-dependent DNA ligase OB-fold domain FY137_07135 PF12826 Helix-hairpin-helix motif FY137_07200 PF00005 ABC transporter FY137_07205 PF02405 Permease MlaE FY137_07210 PF13378 Enolase C-terminal domain-like FY137_07210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_07220 PF01515 Phosphate acetyl/butaryl transferase FY137_07220 PF00390 Malic enzyme, N-terminal domain FY137_07220 PF03949 Malic enzyme, NAD binding domain FY137_07245 PF00881 Nitroreductase family FY137_07250 PF07676 WD40-like Beta Propeller Repeat FY137_07260 PF02540 NAD synthase FY137_07260 PF00795 Carbon-nitrogen hydrolase FY137_07265 PF00884 Sulfatase FY137_07275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY137_07275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_07290 PF05697 Bacterial trigger factor protein (TF) FY137_07290 PF05698 Bacterial trigger factor protein (TF) C-terminus FY137_07290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY137_07315 PF01134 Glucose inhibited division protein A FY137_07335 PF08240 Alcohol dehydrogenase GroES-like domain FY137_07335 PF00107 Zinc-binding dehydrogenase FY137_07345 PF00550 Phosphopantetheine attachment site FY137_07350 PF00501 AMP-binding enzyme FY137_07350 PF13193 AMP-binding enzyme C-terminal domain FY137_07355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY137_07355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY137_07360 PF00117 Glutamine amidotransferase class-I FY137_07360 PF04715 Anthranilate synthase component I, N terminal region FY137_07360 PF00425 chorismate binding enzyme FY137_07365 PF01702 Queuine tRNA-ribosyltransferase FY137_07370 PF02547 Queuosine biosynthesis protein FY137_07375 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY137_07380 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY137_07385 PF01467 Cytidylyltransferase-like FY137_07405 PF00591 Glycosyl transferase family, a/b domain FY137_07405 PF02885 Glycosyl transferase family, helical bundle domain FY137_07410 PF00218 Indole-3-glycerol phosphate synthase FY137_07415 PF01967 MoaC family FY137_07420 PF00994 Probable molybdopterin binding domain FY137_07420 PF03453 MoeA N-terminal region (domain I and II) FY137_07420 PF03454 MoeA C-terminal region (domain IV) FY137_07425 PF17158 Membrane-associated sensor, integral membrane domain FY137_07425 PF00990 Diguanylate cyclase, GGDEF domain FY137_07435 PF00999 Sodium/hydrogen exchanger family FY137_07435 PF02254 TrkA-N domain FY137_07445 PF06463 Molybdenum Cofactor Synthesis C FY137_07445 PF04055 Radical SAM superfamily FY137_07450 PF00892 EamA-like transporter family FY137_07455 PF07690 Major Facilitator Superfamily FY137_07460 PF12804 MobA-like NTP transferase domain FY137_07465 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY137_07470 PF01551 Peptidase family M23 FY137_07485 PF01975 Survival protein SurE FY137_07490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY137_07490 PF02403 Seryl-tRNA synthetase N-terminal domain FY137_07495 PF00902 Sec-independent protein translocase protein (TatC) FY137_07500 PF02416 mttA/Hcf106 family FY137_07505 PF02416 mttA/Hcf106 family FY137_07510 PF04079 Segregation and condensation complex subunit ScpB FY137_07515 PF02616 Segregation and condensation protein ScpA FY137_07520 PF00933 Glycosyl hydrolase family 3 N terminal domain FY137_07530 PF03485 Arginyl tRNA synthetase N terminal domain FY137_07530 PF05746 DALR anticodon binding domain FY137_07530 PF00750 tRNA synthetases class I (R) FY137_07535 PF01966 HD domain FY137_07535 PF13286 Phosphohydrolase-associated domain FY137_07540 PF01521 Iron-sulphur cluster biosynthesis FY137_07550 PF08238 Sel1 repeat FY137_07565 PF08264 Anticodon-binding domain of tRNA FY137_07565 PF00133 tRNA synthetases class I (I, L, M and V) FY137_07565 PF10458 Valyl tRNA synthetase tRNA binding arm FY137_07600 PF03358 NADPH-dependent FMN reductase FY137_07605 PF02464 Competence-damaged protein FY137_07605 PF18146 Damage-inducible protein CinA KH domain FY137_07605 PF00994 Probable molybdopterin binding domain FY137_07610 PF00582 Universal stress protein family FY137_07615 PF00156 Phosphoribosyl transferase domain FY137_07620 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY137_07620 PF02867 Ribonucleotide reductase, barrel domain FY137_07630 PF01566 Natural resistance-associated macrophage protein FY137_07640 PF00664 ABC transporter transmembrane region FY137_07640 PF00005 ABC transporter FY137_07645 PF01594 AI-2E family transporter FY137_07650 PF00583 Acetyltransferase (GNAT) family FY137_07680 PF03129 Anticodon binding domain FY137_07680 PF02824 TGS domain FY137_07680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY137_07680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY137_07690 PF01809 Putative membrane protein insertion efficiency factor FY137_07700 PF01227 GTP cyclohydrolase I FY137_07705 PF01502 Phosphoribosyl-AMP cyclohydrolase FY137_07710 PF01734 Patatin-like phospholipase FY137_07720 PF00571 CBS domain FY137_07720 PF00478 IMP dehydrogenase / GMP reductase domain FY137_07755 PF03313 Serine dehydratase alpha chain FY137_07755 PF03315 Serine dehydratase beta chain FY137_07790 PF03466 LysR substrate binding domain FY137_07790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_07800 PF12833 Helix-turn-helix domain FY137_07800 PF01965 DJ-1/PfpI family FY137_07805 PF01256 Carbohydrate kinase FY137_07805 PF03853 YjeF-related protein N-terminus FY137_07810 PF00543 Nitrogen regulatory protein P-II FY137_07815 PF00120 Glutamine synthetase, catalytic domain FY137_07815 PF03951 Glutamine synthetase, beta-Grasp domain FY137_07825 PF08755 Hemimethylated DNA-binding protein YccV like FY137_07835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_07845 PF00892 EamA-like transporter family FY137_07850 PF00106 short chain dehydrogenase FY137_07855 PF12833 Helix-turn-helix domain FY137_07855 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FY137_07865 PF02559 CarD-like/TRCF domain FY137_07865 PF00270 DEAD/DEAH box helicase FY137_07865 PF00271 Helicase conserved C-terminal domain FY137_07865 PF03461 TRCF domain FY137_07865 PF17757 UvrB interaction domain FY137_07875 PF00270 DEAD/DEAH box helicase FY137_07875 PF17191 RecG wedge domain FY137_07875 PF00271 Helicase conserved C-terminal domain FY137_07885 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY137_07890 PF01402 Ribbon-helix-helix protein, copG family FY137_07905 PF01380 SIS domain FY137_07910 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_07910 PF14602 Hexapeptide repeat of succinyl-transferase FY137_07910 PF12804 MobA-like NTP transferase domain FY137_07915 PF07729 FCD domain FY137_07915 PF00392 Bacterial regulatory proteins, gntR family FY137_07920 PF02608 ABC transporter substrate-binding protein PnrA-like FY137_07925 PF02653 Branched-chain amino acid transport system / permease component FY137_07930 PF02653 Branched-chain amino acid transport system / permease component FY137_07935 PF00005 ABC transporter FY137_07945 PF01494 FAD binding domain FY137_07950 PF03547 Membrane transport protein FY137_07955 PF02683 Cytochrome C biogenesis protein transmembrane region FY137_07975 PF00313 'Cold-shock' DNA-binding domain FY137_08020 PF00665 Integrase core domain FY137_08025 PF01695 IstB-like ATP binding protein FY137_08035 PF07690 Major Facilitator Superfamily FY137_08040 PF00248 Aldo/keto reductase family FY137_08045 PF02424 ApbE family FY137_08070 PF00005 ABC transporter FY137_08070 PF02687 FtsX-like permease family FY137_08070 PF12704 MacB-like periplasmic core domain FY137_08075 PF00005 ABC transporter FY137_08075 PF02687 FtsX-like permease family FY137_08075 PF12704 MacB-like periplasmic core domain FY137_08095 PF01521 Iron-sulphur cluster biosynthesis FY137_08100 PF01883 Iron-sulfur cluster assembly protein FY137_08105 PF00266 Aminotransferase class-V FY137_08110 PF01458 Uncharacterized protein family (UPF0051) FY137_08115 PF00005 ABC transporter FY137_08120 PF01458 Uncharacterized protein family (UPF0051) FY137_08125 PF00266 Aminotransferase class-V FY137_08130 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY137_08135 PF03702 Anhydro-N-acetylmuramic acid kinase FY137_08140 PF00579 tRNA synthetases class I (W and Y) FY137_08150 PF00578 AhpC/TSA family FY137_08155 PF04305 Protein of unknown function (DUF455) FY137_08160 PF01476 LysM domain FY137_08160 PF08525 Opacity-associated protein A N-terminal motif FY137_08160 PF01551 Peptidase family M23 FY137_08165 PF00270 DEAD/DEAH box helicase FY137_08165 PF00271 Helicase conserved C-terminal domain FY137_08180 PF00834 Ribulose-phosphate 3 epimerase family FY137_08190 PF10397 Adenylosuccinate lyase C-terminus FY137_08190 PF00206 Lyase FY137_08200 PF01259 SAICAR synthetase FY137_08205 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY137_08225 PF00155 Aminotransferase class I and II FY137_08225 PF00392 Bacterial regulatory proteins, gntR family FY137_08230 PF00586 AIR synthase related protein, N-terminal domain FY137_08230 PF02769 AIR synthase related protein, C-terminal domain FY137_08230 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY137_08255 PF00462 Glutaredoxin FY137_08260 PF07690 Major Facilitator Superfamily FY137_08265 PF00459 Inositol monophosphatase family FY137_08270 PF00459 Inositol monophosphatase family FY137_08275 PF01171 PP-loop family FY137_08280 PF04960 Glutaminase FY137_08285 PF01479 S4 domain FY137_08285 PF00163 Ribosomal protein S4/S9 N-terminal domain FY137_08290 PF03741 Integral membrane protein TerC family FY137_08305 PF00892 EamA-like transporter family FY137_08310 PF01810 LysE type translocator FY137_08320 PF01177 Asp/Glu/Hydantoin racemase FY137_08325 PF00588 SpoU rRNA Methylase family FY137_08335 PF00180 Isocitrate/isopropylmalate dehydrogenase FY137_08360 PF02272 DHHA1 domain FY137_08360 PF01411 tRNA synthetases class II (A) FY137_08360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY137_08365 PF00154 recA bacterial DNA recombination protein FY137_08370 PF00294 pfkB family carbohydrate kinase FY137_08375 PF04227 Indigoidine synthase A like protein FY137_08380 PF00691 OmpA family FY137_08380 PF01389 OmpA-like transmembrane domain FY137_08390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_08395 PF00528 Binding-protein-dependent transport system inner membrane component FY137_08400 PF00528 Binding-protein-dependent transport system inner membrane component FY137_08405 PF06233 Usg-like family FY137_08410 PF08241 Methyltransferase domain FY137_08415 PF09084 NMT1/THI5 like FY137_08420 PF01037 Lrp/AsnC ligand binding domain FY137_08420 PF13404 AsnC-type helix-turn-helix domain FY137_08425 PF03167 Uracil DNA glycosylase superfamily FY137_08435 PF00512 His Kinase A (phospho-acceptor) domain FY137_08435 PF00989 PAS fold FY137_08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_08440 PF01219 Prokaryotic diacylglycerol kinase FY137_08445 PF02277 Phosphoribosyltransferase FY137_08450 PF02654 Cobalamin-5-phosphate synthase FY137_08465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY137_08475 PF00005 ABC transporter FY137_08480 PF13407 Periplasmic binding protein domain FY137_08485 PF02653 Branched-chain amino acid transport system / permease component FY137_08490 PF00456 Transketolase, thiamine diphosphate binding domain FY137_08495 PF02779 Transketolase, pyrimidine binding domain FY137_08495 PF02780 Transketolase, C-terminal domain FY137_08500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_08500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_08505 PF04198 Putative sugar-binding domain FY137_08510 PF00106 short chain dehydrogenase FY137_08515 PF01061 ABC-2 type transporter FY137_08520 PF00005 ABC transporter FY137_08525 PF01925 Sulfite exporter TauE/SafE FY137_08535 PF08269 Cache domain FY137_08535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_08545 PF00004 ATPase family associated with various cellular activities (AAA) FY137_08545 PF16193 AAA C-terminal domain FY137_08545 PF12002 MgsA AAA+ ATPase C terminal FY137_08550 PF00595 PDZ domain FY137_08550 PF13180 PDZ domain FY137_08560 PF12802 MarR family FY137_08580 PF00920 Dehydratase family FY137_08585 PF00174 Oxidoreductase molybdopterin binding domain FY137_08590 PF01794 Ferric reductase like transmembrane component FY137_08600 PF01196 Ribosomal protein L17 FY137_08605 PF01000 RNA polymerase Rpb3/RpoA insert domain FY137_08605 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY137_08605 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY137_08610 PF00411 Ribosomal protein S11 FY137_08615 PF00416 Ribosomal protein S13/S18 FY137_08625 PF00344 SecY translocase FY137_08630 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY137_08635 PF00327 Ribosomal protein L30p/L7e FY137_08640 PF00333 Ribosomal protein S5, N-terminal domain FY137_08640 PF03719 Ribosomal protein S5, C-terminal domain FY137_08645 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY137_08650 PF00347 Ribosomal protein L6 FY137_08655 PF00410 Ribosomal protein S8 FY137_08660 PF00253 Ribosomal protein S14p/S29e FY137_08665 PF00281 Ribosomal protein L5 FY137_08665 PF00673 ribosomal L5P family C-terminus FY137_08670 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY137_08670 PF00467 KOW motif FY137_08675 PF00238 Ribosomal protein L14p/L23e FY137_08680 PF00366 Ribosomal protein S17 FY137_08685 PF00831 Ribosomal L29 protein FY137_08690 PF00252 Ribosomal protein L16p/L10e FY137_08695 PF00189 Ribosomal protein S3, C-terminal domain FY137_08695 PF07650 KH domain FY137_08700 PF00237 Ribosomal protein L22p/L17e FY137_08705 PF00203 Ribosomal protein S19 FY137_08710 PF00181 Ribosomal Proteins L2, RNA binding domain FY137_08710 PF03947 Ribosomal Proteins L2, C-terminal domain FY137_08715 PF00276 Ribosomal protein L23 FY137_08720 PF00573 Ribosomal protein L4/L1 family FY137_08725 PF00297 Ribosomal protein L3 FY137_08730 PF00338 Ribosomal protein S10p/S20e FY137_08735 PF03143 Elongation factor Tu C-terminal domain FY137_08735 PF03144 Elongation factor Tu domain 2 FY137_08735 PF00009 Elongation factor Tu GTP binding domain FY137_08740 PF00009 Elongation factor Tu GTP binding domain FY137_08740 PF00679 Elongation factor G C-terminus FY137_08740 PF14492 Elongation Factor G, domain II FY137_08740 PF03144 Elongation factor Tu domain 2 FY137_08740 PF03764 Elongation factor G, domain IV FY137_08745 PF00177 Ribosomal protein S7p/S5e FY137_08750 PF00164 Ribosomal protein S12/S23 FY137_08770 PF04998 RNA polymerase Rpb1, domain 5 FY137_08770 PF04997 RNA polymerase Rpb1, domain 1 FY137_08770 PF00623 RNA polymerase Rpb1, domain 2 FY137_08770 PF04983 RNA polymerase Rpb1, domain 3 FY137_08770 PF05000 RNA polymerase Rpb1, domain 4 FY137_08775 PF04560 RNA polymerase Rpb2, domain 7 FY137_08775 PF00562 RNA polymerase Rpb2, domain 6 FY137_08775 PF04563 RNA polymerase beta subunit FY137_08775 PF04561 RNA polymerase Rpb2, domain 2 FY137_08775 PF04565 RNA polymerase Rpb2, domain 3 FY137_08775 PF10385 RNA polymerase beta subunit external 1 domain FY137_08780 PF00542 Ribosomal protein L7/L12 C-terminal domain FY137_08780 PF16320 Ribosomal protein L7/L12 dimerisation domain FY137_08785 PF00466 Ribosomal protein L10 FY137_08790 PF00687 Ribosomal protein L1p/L10e family FY137_08795 PF03946 Ribosomal protein L11, N-terminal domain FY137_08795 PF00298 Ribosomal protein L11, RNA binding domain FY137_08800 PF00467 KOW motif FY137_08800 PF02357 Transcription termination factor nusG FY137_08805 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY137_08815 PF00300 Histidine phosphatase superfamily (branch 1) FY137_08820 PF00009 Elongation factor Tu GTP binding domain FY137_08820 PF03143 Elongation factor Tu C-terminal domain FY137_08820 PF03144 Elongation factor Tu domain 2 FY137_08825 PF03741 Integral membrane protein TerC family FY137_08830 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY137_08860 PF00588 SpoU rRNA Methylase family FY137_08860 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY137_08865 PF03061 Thioesterase superfamily FY137_08885 PF13460 NAD(P)H-binding FY137_08890 PF01638 HxlR-like helix-turn-helix FY137_08905 PF17757 UvrB interaction domain FY137_08905 PF12344 Ultra-violet resistance protein B FY137_08905 PF04851 Type III restriction enzyme, res subunit FY137_08905 PF00271 Helicase conserved C-terminal domain FY137_08905 PF02151 UvrB/uvrC motif FY137_08915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY137_08915 PF00756 Putative esterase FY137_08935 PF00226 DnaJ domain FY137_08935 PF01556 DnaJ C terminal domain FY137_08935 PF00684 DnaJ central domain FY137_08955 PF00990 Diguanylate cyclase, GGDEF domain FY137_08955 PF17151 Periplasmic sensor domain FY137_08965 PF00005 ABC transporter FY137_08965 PF08402 TOBE domain FY137_08975 PF01547 Bacterial extracellular solute-binding protein FY137_08980 PF00155 Aminotransferase class I and II FY137_08995 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY137_08995 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY137_09000 PF00440 Bacterial regulatory proteins, tetR family FY137_09005 PF06719 AraC-type transcriptional regulator N-terminus FY137_09005 PF12833 Helix-turn-helix domain FY137_09010 PF08240 Alcohol dehydrogenase GroES-like domain FY137_09010 PF00107 Zinc-binding dehydrogenase FY137_09015 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_09020 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY137_09030 PF14490 Helix-hairpin-helix containing domain FY137_09030 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY137_09030 PF13538 UvrD-like helicase C-terminal domain FY137_09035 PF11066 Protein of unknown function (DUF2867) FY137_09035 PF13460 NAD(P)H-binding FY137_09060 PF04542 Sigma-70 region 2 FY137_09060 PF08281 Sigma-70, region 4 FY137_09075 PF00248 Aldo/keto reductase family FY137_09090 PF10369 Small subunit of acetolactate synthase FY137_09095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY137_09095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY137_09095 PF00205 Thiamine pyrophosphate enzyme, central domain FY137_09115 PF13302 Acetyltransferase (GNAT) domain FY137_09125 PF13180 PDZ domain FY137_09130 PF01145 SPFH domain / Band 7 family FY137_09135 PF01145 SPFH domain / Band 7 family FY137_09140 PF00186 Dihydrofolate reductase FY137_09145 PF00303 Thymidylate synthase FY137_09185 PF01565 FAD binding domain FY137_09185 PF02913 FAD linked oxidases, C-terminal domain FY137_09190 PF00873 AcrB/AcrD/AcrF family FY137_09195 PF13533 Biotin-lipoyl like FY137_09205 PF00580 UvrD/REP helicase N-terminal domain FY137_09205 PF13361 UvrD-like helicase C-terminal domain FY137_09230 PF00857 Isochorismatase family FY137_09250 PF00557 Metallopeptidase family M24 FY137_09250 PF01321 Creatinase/Prolidase N-terminal domain FY137_09260 PF02630 SCO1/SenC FY137_09270 PF01584 CheW-like domain FY137_09280 PF00929 Exonuclease FY137_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_09285 PF03466 LysR substrate binding domain FY137_09295 PF00583 Acetyltransferase (GNAT) family FY137_09305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY137_09305 PF12826 Helix-hairpin-helix motif FY137_09305 PF03120 NAD-dependent DNA ligase OB-fold domain FY137_09305 PF01653 NAD-dependent DNA ligase adenylation domain FY137_09305 PF00533 BRCA1 C Terminus (BRCT) domain FY137_09310 PF02463 RecF/RecN/SMC N terminal domain FY137_09315 PF13525 Outer membrane lipoprotein FY137_09320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY137_09325 PF00091 Tubulin/FtsZ family, GTPase domain FY137_09325 PF12327 FtsZ family, C-terminal domain FY137_09330 PF02491 SHS2 domain inserted in FTSA FY137_09335 PF03799 Cell division protein FtsQ FY137_09335 PF08478 POTRA domain, FtsQ-type FY137_09340 PF01820 D-ala D-ala ligase N-terminus FY137_09340 PF07478 D-ala D-ala ligase C-terminus FY137_09345 PF07690 Major Facilitator Superfamily FY137_09345 PF00083 Sugar (and other) transporter FY137_09350 PF03707 Bacterial signalling protein N terminal repeat FY137_09350 PF13188 PAS domain FY137_09350 PF00990 Diguanylate cyclase, GGDEF domain FY137_09350 PF00563 EAL domain FY137_09355 PF01565 FAD binding domain FY137_09355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY137_09360 PF01225 Mur ligase family, catalytic domain FY137_09360 PF02875 Mur ligase family, glutamate ligase domain FY137_09360 PF08245 Mur ligase middle domain FY137_09365 PF04101 Glycosyltransferase family 28 C-terminal domain FY137_09365 PF03033 Glycosyltransferase family 28 N-terminal domain FY137_09370 PF01098 Cell cycle protein FY137_09375 PF08245 Mur ligase middle domain FY137_09375 PF02875 Mur ligase family, glutamate ligase domain FY137_09380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY137_09380 PF00953 Glycosyl transferase family 4 FY137_09385 PF08245 Mur ligase middle domain FY137_09385 PF02875 Mur ligase family, glutamate ligase domain FY137_09385 PF01225 Mur ligase family, catalytic domain FY137_09390 PF01225 Mur ligase family, catalytic domain FY137_09390 PF02875 Mur ligase family, glutamate ligase domain FY137_09390 PF08245 Mur ligase middle domain FY137_09395 PF03717 Penicillin-binding Protein dimerisation domain FY137_09395 PF00905 Penicillin binding protein transpeptidase domain FY137_09405 PF01795 MraW methylase family FY137_09410 PF02381 MraZ protein, putative antitoxin-like FY137_09435 PF01510 N-acetylmuramoyl-L-alanine amidase FY137_09440 PF05099 Tellurite resistance protein TerB FY137_09440 PF00226 DnaJ domain FY137_09445 PF00365 Phosphofructokinase FY137_09465 PF13649 Methyltransferase domain FY137_09470 PF01183 Glycosyl hydrolases family 25 FY137_09480 PF02219 Methylenetetrahydrofolate reductase FY137_09485 PF01209 ubiE/COQ5 methyltransferase family FY137_09490 PF00005 ABC transporter FY137_09490 PF12848 ABC transporter FY137_09495 PF12146 Serine aminopeptidase, S33 FY137_09500 PF02515 CoA-transferase family III FY137_09505 PF00205 Thiamine pyrophosphate enzyme, central domain FY137_09505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY137_09505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY137_09530 PF01476 LysM domain FY137_09530 PF03734 L,D-transpeptidase catalytic domain FY137_09535 PF07690 Major Facilitator Superfamily FY137_09545 PF10609 NUBPL iron-transfer P-loop NTPase FY137_09555 PF00465 Iron-containing alcohol dehydrogenase FY137_09560 PF00171 Aldehyde dehydrogenase family FY137_09565 PF03951 Glutamine synthetase, beta-Grasp domain FY137_09565 PF00120 Glutamine synthetase, catalytic domain FY137_09570 PF13520 Amino acid permease FY137_09580 PF01418 Helix-turn-helix domain, rpiR family FY137_09580 PF01380 SIS domain FY137_09600 PF00005 ABC transporter FY137_09600 PF08402 TOBE domain FY137_09605 PF00107 Zinc-binding dehydrogenase FY137_09605 PF08240 Alcohol dehydrogenase GroES-like domain FY137_09620 PF07690 Major Facilitator Superfamily FY137_09625 PF02310 B12 binding domain FY137_09625 PF00809 Pterin binding enzyme FY137_09625 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY137_09625 PF02607 B12 binding domain FY137_09625 PF02574 Homocysteine S-methyltransferase FY137_09645 PF13505 Outer membrane protein beta-barrel domain FY137_09705 PF00004 ATPase family associated with various cellular activities (AAA) FY137_09705 PF17862 AAA+ lid domain FY137_09705 PF01434 Peptidase family M41 FY137_09705 PF06480 FtsH Extracellular FY137_09715 PF00700 Bacterial flagellin C-terminal helical region FY137_09715 PF00669 Bacterial flagellin N-terminal helical region FY137_09725 PF01165 Ribosomal protein S21 FY137_09730 PF01381 Helix-turn-helix FY137_09745 PF02796 Helix-turn-helix domain of resolvase FY137_09745 PF00239 Resolvase, N terminal domain FY137_09805 PF04402 Protein of unknown function (DUF541) FY137_09815 PF01894 Uncharacterised protein family UPF0047 FY137_09820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_09820 PF00512 His Kinase A (phospho-acceptor) domain FY137_09820 PF08446 PAS fold FY137_09820 PF00360 Phytochrome region FY137_09820 PF01590 GAF domain FY137_09830 PF04546 Sigma-70, non-essential region FY137_09830 PF03979 Sigma-70 factor, region 1.1 FY137_09830 PF00140 Sigma-70 factor, region 1.2 FY137_09830 PF04542 Sigma-70 region 2 FY137_09830 PF04539 Sigma-70 region 3 FY137_09830 PF04545 Sigma-70, region 4 FY137_09835 PF01807 CHC2 zinc finger FY137_09835 PF10410 DnaB-helicase binding domain of primase FY137_09835 PF08275 DNA primase catalytic core, N-terminal domain FY137_09835 PF08278 DNA primase DnaG DnaB-binding FY137_09855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY137_09855 PF00117 Glutamine amidotransferase class-I FY137_09860 PF01554 MatE FY137_09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_09865 PF00672 HAMP domain FY137_09865 PF02743 Cache domain FY137_09875 PF04228 Putative neutral zinc metallopeptidase FY137_09890 PF02142 MGS-like domain FY137_09890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY137_09890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_09900 PF17158 Membrane-associated sensor, integral membrane domain FY137_09900 PF00990 Diguanylate cyclase, GGDEF domain FY137_09915 PF01272 Transcription elongation factor, GreA/GreB, C-term FY137_09915 PF03449 Transcription elongation factor, N-terminal FY137_09920 PF00534 Glycosyl transferases group 1 FY137_09925 PF01037 Lrp/AsnC ligand binding domain FY137_09930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_09935 PF03466 LysR substrate binding domain FY137_09945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY137_09960 PF03466 LysR substrate binding domain FY137_09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_09970 PF01699 Sodium/calcium exchanger protein FY137_09975 PF00155 Aminotransferase class I and II FY137_09980 PF00563 EAL domain FY137_09980 PF05231 MASE1 FY137_09995 PF00313 'Cold-shock' DNA-binding domain FY137_10000 PF00753 Metallo-beta-lactamase superfamily FY137_10010 PF12802 MarR family FY137_10015 PF00072 Response regulator receiver domain FY137_10015 PF00486 Transcriptional regulatory protein, C terminal FY137_10020 PF16527 Two-component sensor protein CpxA, periplasmic domain FY137_10020 PF00672 HAMP domain FY137_10020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_10020 PF00512 His Kinase A (phospho-acceptor) domain FY137_10025 PF01588 Putative tRNA binding domain FY137_10030 PF03807 NADP oxidoreductase coenzyme F420-dependent FY137_10030 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY137_10045 PF01790 Prolipoprotein diacylglyceryl transferase FY137_10055 PF02578 Multi-copper polyphenol oxidoreductase laccase FY137_10060 PF00557 Metallopeptidase family M24 FY137_10060 PF01321 Creatinase/Prolidase N-terminal domain FY137_10070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY137_10070 PF14572 Phosphoribosyl synthetase-associated domain FY137_10090 PF00535 Glycosyl transferase family 2 FY137_10095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_10095 PF00672 HAMP domain FY137_10100 PF00171 Aldehyde dehydrogenase family FY137_10105 PF02954 Bacterial regulatory protein, Fis family FY137_10110 PF03707 Bacterial signalling protein N terminal repeat FY137_10110 PF00563 EAL domain FY137_10110 PF13188 PAS domain FY137_10110 PF00990 Diguanylate cyclase, GGDEF domain FY137_10115 PF14693 Ribosomal protein TL5, C-terminal domain FY137_10115 PF01386 Ribosomal L25p family FY137_10120 PF00563 EAL domain FY137_10120 PF00990 Diguanylate cyclase, GGDEF domain FY137_10120 PF08447 PAS fold FY137_10120 PF08448 PAS fold FY137_10130 PF01195 Peptidyl-tRNA hydrolase FY137_10140 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY137_10145 PF01926 50S ribosome-binding GTPase FY137_10145 PF06071 Protein of unknown function (DUF933) FY137_10160 PF00156 Phosphoribosyl transferase domain FY137_10170 PF02167 Cytochrome C1 family FY137_10170 PF00032 Cytochrome b(C-terminal)/b6/petD FY137_10170 PF00033 Cytochrome b/b6/petB FY137_10175 PF00032 Cytochrome b(C-terminal)/b6/petD FY137_10175 PF00033 Cytochrome b/b6/petB FY137_10180 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY137_10180 PF00355 Rieske [2Fe-2S] domain FY137_10190 PF00005 ABC transporter FY137_10190 PF00664 ABC transporter transmembrane region FY137_10195 PF00005 ABC transporter FY137_10195 PF00664 ABC transporter transmembrane region FY137_10200 PF00149 Calcineurin-like phosphoesterase FY137_10205 PF00588 SpoU rRNA Methylase family FY137_10210 PF02690 Na+/Pi-cotransporter FY137_10220 PF01218 Coproporphyrinogen III oxidase FY137_10235 PF01743 Poly A polymerase head domain FY137_10235 PF12627 Probable RNA and SrmB- binding site of polymerase A FY137_10235 PF13735 tRNA nucleotidyltransferase domain 2 putative FY137_10240 PF00293 NUDIX domain FY137_10250 PF07726 ATPase family associated with various cellular activities (AAA) FY137_10250 PF17863 AAA lid domain FY137_10270 PF00583 Acetyltransferase (GNAT) family FY137_10275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_10275 PF03466 LysR substrate binding domain FY137_10285 PF07690 Major Facilitator Superfamily FY137_10295 PF13409 Glutathione S-transferase, N-terminal domain FY137_10310 PF08502 LeuA allosteric (dimerisation) domain FY137_10310 PF00682 HMGL-like FY137_10315 PF03594 Benzoate membrane transport protein FY137_10330 PF04542 Sigma-70 region 2 FY137_10330 PF04545 Sigma-70, region 4 FY137_10340 PF00574 Clp protease FY137_10345 PF04955 HupE / UreJ protein FY137_10355 PF14489 QueF-like protein FY137_10360 PF01545 Cation efflux family FY137_10360 PF16916 Dimerisation domain of Zinc Transporter FY137_10370 PF13458 Periplasmic binding protein FY137_10380 PF01022 Bacterial regulatory protein, arsR family FY137_10385 PF00005 ABC transporter FY137_10385 PF00571 CBS domain FY137_10390 PF00528 Binding-protein-dependent transport system inner membrane component FY137_10395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY137_10400 PF00265 Thymidine kinase FY137_10405 PF00127 Copper binding proteins, plastocyanin/azurin family FY137_10415 PF03472 Autoinducer binding domain FY137_10415 PF00196 Bacterial regulatory proteins, luxR family FY137_10420 PF03350 Uncharacterized protein family, UPF0114 FY137_10425 PF07715 TonB-dependent Receptor Plug Domain FY137_10425 PF04886 PT repeat FY137_10425 PF00593 TonB dependent receptor FY137_10435 PF00425 chorismate binding enzyme FY137_10435 PF00117 Glutamine amidotransferase class-I FY137_10435 PF04715 Anthranilate synthase component I, N terminal region FY137_10445 PF11871 Domain of unknown function (DUF3391) FY137_10445 PF01966 HD domain FY137_10450 PF13382 Adenine deaminase C-terminal domain FY137_10450 PF01979 Amidohydrolase family FY137_10460 PF00583 Acetyltransferase (GNAT) family FY137_10465 PF00128 Alpha amylase, catalytic domain FY137_10470 PF00294 pfkB family carbohydrate kinase FY137_10490 PF01926 50S ribosome-binding GTPase FY137_10490 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY137_10510 PF05992 SbmA/BacA-like family FY137_10520 PF00557 Metallopeptidase family M24 FY137_10535 PF00111 2Fe-2S iron-sulfur cluster binding domain FY137_10535 PF01799 [2Fe-2S] binding domain FY137_10540 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY137_10540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY137_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_10550 PF03466 LysR substrate binding domain FY137_10565 PF01979 Amidohydrolase family FY137_10575 PF01070 FMN-dependent dehydrogenase FY137_10580 PF00893 Small Multidrug Resistance protein FY137_10585 PF17932 Tetracyclin repressor-like, C-terminal domain FY137_10585 PF00440 Bacterial regulatory proteins, tetR family FY137_10590 PF07943 Penicillin-binding protein 5, C-terminal domain FY137_10590 PF00768 D-alanyl-D-alanine carboxypeptidase FY137_10595 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FY137_10610 PF00576 HIUase/Transthyretin family FY137_10615 PF04115 Ureidoglycolate lyase FY137_10630 PF09349 OHCU decarboxylase FY137_10630 PF01014 Uricase FY137_10640 PF06299 Protein of unknown function (DUF1045) FY137_10645 PF01266 FAD dependent oxidoreductase FY137_10650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY137_10650 PF01266 FAD dependent oxidoreductase FY137_10655 PF00672 HAMP domain FY137_10655 PF01627 Hpt domain FY137_10655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY137_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_10655 PF00072 Response regulator receiver domain FY137_10655 PF00512 His Kinase A (phospho-acceptor) domain FY137_10660 PF00270 DEAD/DEAH box helicase FY137_10660 PF00271 Helicase conserved C-terminal domain FY137_10670 PF07681 DoxX FY137_10675 PF03734 L,D-transpeptidase catalytic domain FY137_10675 PF01476 LysM domain FY137_10685 PF14403 Circularly permuted ATP-grasp type 2 FY137_10690 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY137_10690 PF14403 Circularly permuted ATP-grasp type 2 FY137_10695 PF08379 Bacterial transglutaminase-like N-terminal region FY137_10695 PF01841 Transglutaminase-like superfamily FY137_10720 PF02653 Branched-chain amino acid transport system / permease component FY137_10725 PF00005 ABC transporter FY137_10730 PF13407 Periplasmic binding protein domain FY137_10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_10735 PF03466 LysR substrate binding domain FY137_10765 PF07508 Recombinase FY137_10765 PF00239 Resolvase, N terminal domain FY137_10765 PF13408 Recombinase zinc beta ribbon domain FY137_10775 PF00669 Bacterial flagellin N-terminal helical region FY137_10775 PF00700 Bacterial flagellin C-terminal helical region FY137_10805 PF09084 NMT1/THI5 like FY137_10810 PF07690 Major Facilitator Superfamily FY137_10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_10825 PF03466 LysR substrate binding domain FY137_10840 PF02899 Phage integrase, N-terminal SAM-like domain FY137_10840 PF00589 Phage integrase family FY137_10845 PF00528 Binding-protein-dependent transport system inner membrane component FY137_10850 PF02086 D12 class N6 adenine-specific DNA methyltransferase FY137_10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_10855 PF00512 His Kinase A (phospho-acceptor) domain FY137_10875 PF12146 Serine aminopeptidase, S33 FY137_10880 PF12146 Serine aminopeptidase, S33 FY137_10885 PF03466 LysR substrate binding domain FY137_10885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_10890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_10890 PF00672 HAMP domain FY137_10895 PF07690 Major Facilitator Superfamily FY137_10905 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY137_10905 PF00809 Pterin binding enzyme FY137_10905 PF02574 Homocysteine S-methyltransferase FY137_10905 PF02607 B12 binding domain FY137_10905 PF02310 B12 binding domain FY137_10910 PF00528 Binding-protein-dependent transport system inner membrane component FY137_10915 PF00528 Binding-protein-dependent transport system inner membrane component FY137_10920 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_10925 PF00005 ABC transporter FY137_10945 PF00331 Glycosyl hydrolase family 10 FY137_10950 PF00535 Glycosyl transferase family 2 FY137_10965 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY137_10980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY137_10980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY137_10980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY137_10980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY137_10985 PF01152 Bacterial-like globin FY137_11005 PF08362 YcdC-like protein, C-terminal region FY137_11005 PF00440 Bacterial regulatory proteins, tetR family FY137_11010 PF07687 Peptidase dimerisation domain FY137_11010 PF01546 Peptidase family M20/M25/M40 FY137_11015 PF01979 Amidohydrolase family FY137_11020 PF00293 NUDIX domain FY137_11025 PF00005 ABC transporter FY137_11030 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11035 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11050 PF00873 AcrB/AcrD/AcrF family FY137_11060 PF12706 Beta-lactamase superfamily domain FY137_11060 PF00753 Metallo-beta-lactamase superfamily FY137_11065 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY137_11070 PF01730 UreF FY137_11075 PF05194 UreE urease accessory protein, C-terminal domain FY137_11075 PF02814 UreE urease accessory protein, N-terminal domain FY137_11080 PF08534 Redoxin FY137_11090 PF01979 Amidohydrolase family FY137_11090 PF00449 Urease alpha-subunit, N-terminal domain FY137_11100 PF07007 Lysozyme inhibitor LprI FY137_11110 PF00699 Urease beta subunit FY137_11115 PF06906 Protein of unknown function (DUF1272) FY137_11120 PF00547 Urease, gamma subunit FY137_11125 PF01774 UreD urease accessory protein FY137_11135 PF00005 ABC transporter FY137_11145 PF00005 ABC transporter FY137_11145 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_11155 PF02653 Branched-chain amino acid transport system / permease component FY137_11165 PF10931 Protein of unknown function (DUF2735) FY137_11170 PF00120 Glutamine synthetase, catalytic domain FY137_11170 PF03951 Glutamine synthetase, beta-Grasp domain FY137_11175 PF00106 short chain dehydrogenase FY137_11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_11180 PF00512 His Kinase A (phospho-acceptor) domain FY137_11180 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY137_11180 PF01627 Hpt domain FY137_11180 PF00989 PAS fold FY137_11180 PF00072 Response regulator receiver domain FY137_11185 PF00072 Response regulator receiver domain FY137_11195 PF01522 Polysaccharide deacetylase FY137_11195 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY137_11200 PF13458 Periplasmic binding protein FY137_11210 PF00005 ABC transporter FY137_11215 PF00005 ABC transporter FY137_11215 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_11220 PF02653 Branched-chain amino acid transport system / permease component FY137_11220 PF11862 Domain of unknown function (DUF3382) FY137_11225 PF02653 Branched-chain amino acid transport system / permease component FY137_11230 PF00459 Inositol monophosphatase family FY137_11260 PF00486 Transcriptional regulatory protein, C terminal FY137_11260 PF00072 Response regulator receiver domain FY137_11280 PF10090 Histidine phosphotransferase C-terminal domain FY137_11295 PF00588 SpoU rRNA Methylase family FY137_11305 PF00849 RNA pseudouridylate synthase FY137_11315 PF00140 Sigma-70 factor, region 1.2 FY137_11315 PF04542 Sigma-70 region 2 FY137_11315 PF04545 Sigma-70, region 4 FY137_11325 PF00709 Adenylosuccinate synthetase FY137_11365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_11375 PF03167 Uracil DNA glycosylase superfamily FY137_11380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_11385 PF04304 Protein of unknown function (DUF454) FY137_11390 PF00005 ABC transporter FY137_11395 PF01032 FecCD transport family FY137_11400 PF01497 Periplasmic binding protein FY137_11410 PF06228 Haem utilisation ChuX/HutX FY137_11420 PF00551 Formyl transferase FY137_11435 PF00672 HAMP domain FY137_11435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_11435 PF00512 His Kinase A (phospho-acceptor) domain FY137_11440 PF00072 Response regulator receiver domain FY137_11440 PF00486 Transcriptional regulatory protein, C terminal FY137_11450 PF03401 Tripartite tricarboxylate transporter family receptor FY137_11460 PF01970 Tripartite tricarboxylate transporter TctA family FY137_11475 PF01032 FecCD transport family FY137_11480 PF01032 FecCD transport family FY137_11485 PF00005 ABC transporter FY137_11490 PF00210 Ferritin-like domain FY137_11505 PF00248 Aldo/keto reductase family FY137_11510 PF07690 Major Facilitator Superfamily FY137_11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_11515 PF03466 LysR substrate binding domain FY137_11520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_11520 PF03466 LysR substrate binding domain FY137_11525 PF07859 alpha/beta hydrolase fold FY137_11530 PF13533 Biotin-lipoyl like FY137_11535 PF00873 AcrB/AcrD/AcrF family FY137_11550 PF13396 Phospholipase_D-nuclease N-terminal FY137_11550 PF13091 PLD-like domain FY137_11555 PF08543 Phosphomethylpyrimidine kinase FY137_11560 PF00484 Carbonic anhydrase FY137_11570 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY137_11570 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY137_11575 PF00083 Sugar (and other) transporter FY137_11580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY137_11580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY137_11580 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY137_11585 PF02233 NAD(P) transhydrogenase beta subunit FY137_11590 PF01613 Flavin reductase like domain FY137_11595 PF00881 Nitroreductase family FY137_11600 PF00561 alpha/beta hydrolase fold FY137_11605 PF01042 Endoribonuclease L-PSP FY137_11610 PF00857 Isochorismatase family FY137_11615 PF00296 Luciferase-like monooxygenase FY137_11620 PF01126 Heme oxygenase FY137_11625 PF00701 Dihydrodipicolinate synthetase family FY137_11630 PF07729 FCD domain FY137_11630 PF00392 Bacterial regulatory proteins, gntR family FY137_11640 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11645 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11650 PF03459 TOBE domain FY137_11650 PF00005 ABC transporter FY137_11650 PF17912 MalK OB fold domain FY137_11655 PF00294 pfkB family carbohydrate kinase FY137_11660 PF03576 Peptidase family S58 FY137_11665 PF01063 Amino-transferase class IV FY137_11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_11670 PF03466 LysR substrate binding domain FY137_11675 PF00144 Beta-lactamase FY137_11680 PF00005 ABC transporter FY137_11680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_11685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_11685 PF00005 ABC transporter FY137_11690 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11690 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_11695 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_11705 PF01244 Membrane dipeptidase (Peptidase family M19) FY137_11715 PF09924 Uncharacterised conserved protein (DUF2156) FY137_11715 PF03706 Lysylphosphatidylglycerol synthase TM region FY137_11730 PF07690 Major Facilitator Superfamily FY137_11740 PF00775 Dioxygenase FY137_11740 PF04444 Catechol dioxygenase N terminus FY137_11745 PF00465 Iron-containing alcohol dehydrogenase FY137_11750 PF04909 Amidohydrolase FY137_11755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY137_11755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_11760 PF01613 Flavin reductase like domain FY137_11780 PF00578 AhpC/TSA family FY137_11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_11800 PF00512 His Kinase A (phospho-acceptor) domain FY137_11805 PF00072 Response regulator receiver domain FY137_11805 PF00486 Transcriptional regulatory protein, C terminal FY137_11815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY137_11820 PF00005 ABC transporter FY137_11820 PF08402 TOBE domain FY137_11825 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11840 PF00072 Response regulator receiver domain FY137_11840 PF00486 Transcriptional regulatory protein, C terminal FY137_11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_11845 PF08448 PAS fold FY137_11845 PF00512 His Kinase A (phospho-acceptor) domain FY137_11845 PF13188 PAS domain FY137_11845 PF00072 Response regulator receiver domain FY137_11850 PF00202 Aminotransferase class-III FY137_11855 PF03466 LysR substrate binding domain FY137_11855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_11860 PF00665 Integrase core domain FY137_11865 PF01695 IstB-like ATP binding protein FY137_11870 PF00474 Sodium:solute symporter family FY137_11880 PF07690 Major Facilitator Superfamily FY137_11885 PF01613 Flavin reductase like domain FY137_11890 PF00296 Luciferase-like monooxygenase FY137_11905 PF00005 ABC transporter FY137_11910 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11915 PF00528 Binding-protein-dependent transport system inner membrane component FY137_11920 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_11935 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY137_11960 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY137_12000 PF01259 SAICAR synthetase FY137_12010 PF00529 HlyD membrane-fusion protein of T1SS FY137_12010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_12015 PF00873 AcrB/AcrD/AcrF family FY137_12020 PF02321 Outer membrane efflux protein FY137_12025 PF01132 Elongation factor P (EF-P) OB domain FY137_12025 PF08207 Elongation factor P (EF-P) KOW-like domain FY137_12025 PF09285 Elongation factor P, C-terminal FY137_12030 PF00152 tRNA synthetases class II (D, K and N) FY137_12035 PF12544 Lysine-2,3-aminomutase FY137_12035 PF04055 Radical SAM superfamily FY137_12050 PF03466 LysR substrate binding domain FY137_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_12055 PF01266 FAD dependent oxidoreductase FY137_12065 PF00528 Binding-protein-dependent transport system inner membrane component FY137_12070 PF03459 TOBE domain FY137_12070 PF00005 ABC transporter FY137_12080 PF03576 Peptidase family S58 FY137_12085 PF05690 Thiazole biosynthesis protein ThiG FY137_12095 PF01266 FAD dependent oxidoreductase FY137_12100 PF13667 ThiC-associated domain FY137_12100 PF01964 Radical SAM ThiC family FY137_12105 PF00550 Phosphopantetheine attachment site FY137_12140 PF00664 ABC transporter transmembrane region FY137_12140 PF00005 ABC transporter FY137_12145 PF00027 Cyclic nucleotide-binding domain FY137_12145 PF13545 Crp-like helix-turn-helix domain FY137_12155 PF00672 HAMP domain FY137_12155 PF00211 Adenylate and Guanylate cyclase catalytic domain FY137_12165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY137_12165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY137_12165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY137_12185 PF00005 ABC transporter FY137_12185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_12190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_12195 PF00528 Binding-protein-dependent transport system inner membrane component FY137_12200 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_12200 PF00528 Binding-protein-dependent transport system inner membrane component FY137_12210 PF13439 Glycosyltransferase Family 4 FY137_12210 PF00534 Glycosyl transferases group 1 FY137_12215 PF04101 Glycosyltransferase family 28 C-terminal domain FY137_12215 PF03033 Glycosyltransferase family 28 N-terminal domain FY137_12220 PF03932 CutC family FY137_12225 PF07690 Major Facilitator Superfamily FY137_12235 PF00728 Glycosyl hydrolase family 20, catalytic domain FY137_12235 PF02838 Glycosyl hydrolase family 20, domain 2 FY137_12245 PF01380 SIS domain FY137_12245 PF01418 Helix-turn-helix domain, rpiR family FY137_12255 PF00005 ABC transporter FY137_12255 PF17912 MalK OB fold domain FY137_12260 PF01547 Bacterial extracellular solute-binding protein FY137_12265 PF00528 Binding-protein-dependent transport system inner membrane component FY137_12270 PF00528 Binding-protein-dependent transport system inner membrane component FY137_12285 PF00392 Bacterial regulatory proteins, gntR family FY137_12285 PF07702 UTRA domain FY137_12290 PF01380 SIS domain FY137_12295 PF01979 Amidohydrolase family FY137_12300 PF00480 ROK family FY137_12305 PF01494 FAD binding domain FY137_12310 PF01569 PAP2 superfamily FY137_12315 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY137_12315 PF13288 DXP reductoisomerase C-terminal domain FY137_12315 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY137_12320 PF00155 Aminotransferase class I and II FY137_12330 PF01103 Surface antigen FY137_12330 PF07244 Surface antigen variable number repeat FY137_12330 PF17243 POTRA domain TamA domain 1 FY137_12340 PF01584 CheW-like domain FY137_12345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_12345 PF08447 PAS fold FY137_12345 PF13426 PAS domain FY137_12350 PF02634 FdhD/NarQ family FY137_12355 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY137_12360 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY137_12360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY137_12365 PF00231 ATP synthase FY137_12370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY137_12370 PF00306 ATP synthase alpha/beta chain, C terminal domain FY137_12370 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY137_12375 PF00213 ATP synthase delta (OSCP) subunit FY137_12385 PF00270 DEAD/DEAH box helicase FY137_12385 PF17764 3′ DNA-binding domain (3′BD) FY137_12385 PF18074 Primosomal protein N C-terminal domain FY137_12385 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY137_12390 PF02899 Phage integrase, N-terminal SAM-like domain FY137_12390 PF00589 Phage integrase family FY137_12410 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_12410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY137_12415 PF01810 LysE type translocator FY137_12425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY137_12425 PF00364 Biotin-requiring enzyme FY137_12425 PF02817 e3 binding domain FY137_12430 PF16870 2-oxoglutarate dehydrogenase C-terminal FY137_12430 PF16078 2-oxoglutarate dehydrogenase N-terminus FY137_12430 PF00676 Dehydrogenase E1 component FY137_12430 PF02779 Transketolase, pyrimidine binding domain FY137_12435 PF00549 CoA-ligase FY137_12435 PF02629 CoA binding domain FY137_12440 PF08442 ATP-grasp domain FY137_12440 PF00549 CoA-ligase FY137_12445 PF00056 lactate/malate dehydrogenase, NAD binding domain FY137_12445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY137_12450 PF03969 AFG1-like ATPase FY137_12455 PF02974 Protease inhibitor Inh FY137_12460 PF13237 4Fe-4S dicluster domain FY137_12460 PF13085 2Fe-2S iron-sulfur cluster binding domain FY137_12465 PF00890 FAD binding domain FY137_12465 PF02910 Fumarate reductase flavoprotein C-term FY137_12475 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY137_12500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY137_12500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY137_12505 PF00814 Glycoprotease family FY137_12510 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY137_12510 PF03900 Porphobilinogen deaminase, C-terminal domain FY137_12535 PF00117 Glutamine amidotransferase class-I FY137_12545 PF02325 YGGT family FY137_12550 PF02594 Uncharacterised ACR, YggU family COG1872 FY137_12555 PF00719 Inorganic pyrophosphatase FY137_12565 PF00009 Elongation factor Tu GTP binding domain FY137_12565 PF03144 Elongation factor Tu domain 2 FY137_12565 PF00679 Elongation factor G C-terminus FY137_12570 PF01432 Peptidase family M3 FY137_12580 PF01047 MarR family FY137_12585 PF07690 Major Facilitator Superfamily FY137_12590 PF00764 Arginosuccinate synthase FY137_12595 PF00106 short chain dehydrogenase FY137_12600 PF01810 LysE type translocator FY137_12605 PF00005 ABC transporter FY137_12610 PF02653 Branched-chain amino acid transport system / permease component FY137_12620 PF04055 Radical SAM superfamily FY137_12635 PF01329 Pterin 4 alpha carbinolamine dehydratase FY137_12640 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY137_12645 PF02834 LigT like Phosphoesterase FY137_12650 PF13472 GDSL-like Lipase/Acylhydrolase family FY137_12655 PF00005 ABC transporter FY137_12665 PF01027 Inhibitor of apoptosis-promoting Bax1 FY137_12680 PF00330 Aconitase family (aconitate hydratase) FY137_12680 PF00694 Aconitase C-terminal domain FY137_12685 PF00005 ABC transporter FY137_12690 PF03379 CcmB protein FY137_12695 PF01578 Cytochrome C assembly protein FY137_12705 PF08534 Redoxin FY137_12710 PF00990 Diguanylate cyclase, GGDEF domain FY137_12715 PF10755 Protein of unknown function (DUF2585) FY137_12720 PF04279 Intracellular septation protein A FY137_12725 PF00448 SRP54-type protein, GTPase domain FY137_12725 PF02881 SRP54-type protein, helical bundle domain FY137_12730 PF04055 Radical SAM superfamily FY137_12730 PF00919 Uncharacterized protein family UPF0004 FY137_12735 PF01678 Diaminopimelate epimerase FY137_12740 PF12706 Beta-lactamase superfamily domain FY137_12745 PF02978 Signal peptide binding domain FY137_12745 PF02881 SRP54-type protein, helical bundle domain FY137_12745 PF00448 SRP54-type protein, GTPase domain FY137_12750 PF02153 Prephenate dehydrogenase FY137_12750 PF01817 Chorismate mutase type II FY137_12755 PF00886 Ribosomal protein S16 FY137_12760 PF01782 RimM N-terminal domain FY137_12760 PF05239 PRC-barrel domain FY137_12765 PF01746 tRNA (Guanine-1)-methyltransferase FY137_12775 PF01245 Ribosomal protein L19 FY137_12780 PF00664 ABC transporter transmembrane region FY137_12780 PF00005 ABC transporter FY137_12785 PF00529 HlyD membrane-fusion protein of T1SS FY137_12785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_12795 PF07690 Major Facilitator Superfamily FY137_12800 PF00330 Aconitase family (aconitate hydratase) FY137_12815 PF01435 Peptidase family M48 FY137_12820 PF00005 ABC transporter FY137_12825 PF00528 Binding-protein-dependent transport system inner membrane component FY137_12830 PF01547 Bacterial extracellular solute-binding protein FY137_12840 PF00005 ABC transporter FY137_12840 PF16326 ABC transporter C-terminal domain FY137_12850 PF04204 Homoserine O-succinyltransferase FY137_12855 PF01263 Aldose 1-epimerase FY137_12860 PF00912 Transglycosylase FY137_12865 PF00348 Polyprenyl synthetase FY137_12870 PF13488 Glycine zipper FY137_12870 PF00691 OmpA family FY137_12875 PF04551 GcpE protein FY137_12880 PF07690 Major Facilitator Superfamily FY137_12885 PF00455 DeoR C terminal sensor domain FY137_12885 PF08220 DeoR-like helix-turn-helix domain FY137_12890 PF02785 Biotin carboxylase C-terminal domain FY137_12890 PF00289 Biotin carboxylase, N-terminal domain FY137_12890 PF00364 Biotin-requiring enzyme FY137_12890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_12890 PF00682 HMGL-like FY137_12890 PF02436 Conserved carboxylase domain FY137_12895 PF00196 Bacterial regulatory proteins, luxR family FY137_12895 PF00072 Response regulator receiver domain FY137_12900 PF00664 ABC transporter transmembrane region FY137_12900 PF00005 ABC transporter FY137_12910 PF10091 Putative glucoamylase FY137_12910 PF06165 Glycosyltransferase family 36 FY137_12910 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY137_12915 PF07687 Peptidase dimerisation domain FY137_12915 PF01546 Peptidase family M20/M25/M40 FY137_12920 PF01266 FAD dependent oxidoreductase FY137_12925 PF00291 Pyridoxal-phosphate dependent enzyme FY137_12930 PF00920 Dehydratase family FY137_12935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY137_12935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY137_12940 PF01370 NAD dependent epimerase/dehydratase family FY137_12945 PF01565 FAD binding domain FY137_12945 PF02913 FAD linked oxidases, C-terminal domain FY137_12950 PF00392 Bacterial regulatory proteins, gntR family FY137_12950 PF07729 FCD domain FY137_12960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY137_12965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_12970 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_12975 PF13193 AMP-binding enzyme C-terminal domain FY137_12975 PF16177 Acetyl-coenzyme A synthetase N-terminus FY137_12975 PF00501 AMP-binding enzyme FY137_12985 PF01168 Alanine racemase, N-terminal domain FY137_12990 PF00133 tRNA synthetases class I (I, L, M and V) FY137_12990 PF13603 Leucyl-tRNA synthetase, Domain 2 FY137_12990 PF08264 Anticodon-binding domain of tRNA FY137_13005 PF00037 4Fe-4S binding domain FY137_13005 PF11953 Domain of unknown function (DUF3470) FY137_13010 PF00579 tRNA synthetases class I (W and Y) FY137_13010 PF01479 S4 domain FY137_13020 PF01494 FAD binding domain FY137_13030 PF00543 Nitrogen regulatory protein P-II FY137_13035 PF00909 Ammonium Transporter Family FY137_13040 PF17854 FtsK alpha domain FY137_13040 PF09397 Ftsk gamma domain FY137_13040 PF01580 FtsK/SpoIIIE family FY137_13040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY137_13045 PF03548 Outer membrane lipoprotein carrier protein LolA FY137_13060 PF00072 Response regulator receiver domain FY137_13060 PF00486 Transcriptional regulatory protein, C terminal FY137_13070 PF02559 CarD-like/TRCF domain FY137_13075 PF05088 Bacterial NAD-glutamate dehydrogenase FY137_13080 PF11700 Vacuole effluxer Atg22 like FY137_13085 PF05233 PHB accumulation regulatory domain FY137_13085 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY137_13090 PF00108 Thiolase, N-terminal domain FY137_13090 PF02803 Thiolase, C-terminal domain FY137_13105 PF00210 Ferritin-like domain FY137_13110 PF00293 NUDIX domain FY137_13115 PF04748 Divergent polysaccharide deacetylase FY137_13120 PF03572 Peptidase family S41 FY137_13120 PF13180 PDZ domain FY137_13130 PF02590 Predicted SPOUT methyltransferase FY137_13140 PF01467 Cytidylyltransferase-like FY137_13145 PF00171 Aldehyde dehydrogenase family FY137_13150 PF00696 Amino acid kinase family FY137_13150 PF01472 PUA domain FY137_13155 PF01018 GTP1/OBG FY137_13155 PF01926 50S ribosome-binding GTPase FY137_13160 PF13302 Acetyltransferase (GNAT) domain FY137_13170 PF01016 Ribosomal L27 protein FY137_13175 PF00829 Ribosomal prokaryotic L21 protein FY137_13190 PF03328 HpcH/HpaI aldolase/citrate lyase family FY137_13200 PF00694 Aconitase C-terminal domain FY137_13205 PF00180 Isocitrate/isopropylmalate dehydrogenase FY137_13210 PF03150 Di-haem cytochrome c peroxidase FY137_13215 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY137_13215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY137_13220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_13225 PF01888 CbiD FY137_13230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_13240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_13245 PF02571 Precorrin-6x reductase CbiJ/CobK FY137_13250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_13255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_13260 PF02570 Precorrin-8X methylmutase FY137_13265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY137_13270 PF02514 CobN/Magnesium Chelatase FY137_13275 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY137_13275 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY137_13285 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY137_13290 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY137_13290 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY137_13295 PF03186 CobD/Cbib protein FY137_13300 PF00155 Aminotransferase class I and II FY137_13305 PF13378 Enolase C-terminal domain-like FY137_13305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_13310 PF05336 L-rhamnose mutarotase FY137_13315 PF01232 Mannitol dehydrogenase Rossmann domain FY137_13315 PF08125 Mannitol dehydrogenase C-terminal domain FY137_13320 PF08240 Alcohol dehydrogenase GroES-like domain FY137_13320 PF00107 Zinc-binding dehydrogenase FY137_13330 PF00248 Aldo/keto reductase family FY137_13340 PF02653 Branched-chain amino acid transport system / permease component FY137_13345 PF00005 ABC transporter FY137_13350 PF00392 Bacterial regulatory proteins, gntR family FY137_13350 PF07729 FCD domain FY137_13355 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY137_13355 PF08666 SAF domain FY137_13360 PF01808 AICARFT/IMPCHase bienzyme FY137_13360 PF02142 MGS-like domain FY137_13370 PF01189 16S rRNA methyltransferase RsmB/F FY137_13370 PF01029 NusB family FY137_13375 PF01435 Peptidase family M48 FY137_13385 PF17762 HTH domain found in ParB protein FY137_13385 PF02195 ParB-like nuclease domain FY137_13390 PF13614 AAA domain FY137_13395 PF02527 rRNA small subunit methyltransferase G FY137_13400 PF01134 Glucose inhibited division protein A FY137_13400 PF13932 GidA associated domain FY137_13405 PF01926 50S ribosome-binding GTPase FY137_13405 PF12631 MnmE helical domain FY137_13405 PF10396 GTP-binding protein TrmE N-terminus FY137_13410 PF07498 Rho termination factor, N-terminal domain FY137_13410 PF07497 Rho termination factor, RNA-binding domain FY137_13410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY137_13415 PF03653 Uncharacterised protein family (UPF0093) FY137_13420 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY137_13425 PF03618 Kinase/pyrophosphorylase FY137_13430 PF02545 Maf-like protein FY137_13435 PF08501 Shikimate dehydrogenase substrate binding domain FY137_13435 PF01488 Shikimate / quinate 5-dehydrogenase FY137_13435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY137_13440 PF01121 Dephospho-CoA kinase FY137_13445 PF00929 Exonuclease FY137_13450 PF02556 Preprotein translocase subunit SecB FY137_13455 PF04186 FxsA cytoplasmic membrane protein FY137_13465 PF03562 MltA specific insert domain FY137_13465 PF06725 3D domain FY137_13480 PF00204 DNA gyrase B FY137_13480 PF00986 DNA gyrase B subunit, carboxyl terminus FY137_13480 PF01751 Toprim domain FY137_13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_13490 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY137_13505 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY137_13510 PF00291 Pyridoxal-phosphate dependent enzyme FY137_13515 PF00290 Tryptophan synthase alpha chain FY137_13520 PF01039 Carboxyl transferase domain FY137_13525 PF08245 Mur ligase middle domain FY137_13525 PF02875 Mur ligase family, glutamate ligase domain FY137_13530 PF00085 Thioredoxin FY137_13535 PF00580 UvrD/REP helicase N-terminal domain FY137_13535 PF13361 UvrD-like helicase C-terminal domain FY137_13535 PF12705 PD-(D/E)XK nuclease superfamily FY137_13545 PF12804 MobA-like NTP transferase domain FY137_13550 PF01636 Phosphotransferase enzyme family FY137_13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_13555 PF00512 His Kinase A (phospho-acceptor) domain FY137_13560 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY137_13560 PF05221 S-adenosyl-L-homocysteine hydrolase FY137_13565 PF00381 PTS HPr component phosphorylation site FY137_13570 PF03610 PTS system fructose IIA component FY137_13570 PF03830 PTS system sorbose subfamily IIB component FY137_13575 PF02603 HPr Serine kinase N terminus FY137_13575 PF07475 HPr Serine kinase C-terminal domain FY137_13580 PF13756 Stimulus-sensing domain FY137_13580 PF13755 Sensor N-terminal transmembrane domain FY137_13580 PF00512 His Kinase A (phospho-acceptor) domain FY137_13580 PF00672 HAMP domain FY137_13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_13585 PF00072 Response regulator receiver domain FY137_13585 PF00486 Transcriptional regulatory protein, C terminal FY137_13590 PF01293 Phosphoenolpyruvate carboxykinase FY137_13595 PF00472 RF-1 domain FY137_13600 PF04972 BON domain FY137_13600 PF01476 LysM domain FY137_13605 PF00485 Phosphoribulokinase / Uridine kinase family FY137_13610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY137_13615 PF00977 Histidine biosynthesis protein FY137_13620 PF00977 Histidine biosynthesis protein FY137_13625 PF00117 Glutamine amidotransferase class-I FY137_13635 PF00475 Imidazoleglycerol-phosphate dehydratase FY137_13640 PF00227 Proteasome subunit FY137_13645 PF00004 ATPase family associated with various cellular activities (AAA) FY137_13645 PF07724 AAA domain (Cdc48 subfamily) FY137_13645 PF10431 C-terminal, D2-small domain, of ClpB protein FY137_13655 PF01274 Malate synthase FY137_13670 PF00072 Response regulator receiver domain FY137_13675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_13675 PF00512 His Kinase A (phospho-acceptor) domain FY137_13680 PF00270 DEAD/DEAH box helicase FY137_13680 PF04408 Helicase associated domain (HA2) FY137_13680 PF00271 Helicase conserved C-terminal domain FY137_13680 PF08482 ATP-dependent helicase C-terminal FY137_13715 PF03466 LysR substrate binding domain FY137_13715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_13720 PF01979 Amidohydrolase family FY137_13725 PF01546 Peptidase family M20/M25/M40 FY137_13735 PF01175 Urocanase Rossmann-like domain FY137_13735 PF17391 Urocanase N-terminal domain FY137_13735 PF17392 Urocanase C-terminal domain FY137_13740 PF07690 Major Facilitator Superfamily FY137_13745 PF00221 Aromatic amino acid lyase FY137_13750 PF00270 DEAD/DEAH box helicase FY137_13750 PF00570 HRDC domain FY137_13750 PF16124 RecQ zinc-binding FY137_13750 PF00271 Helicase conserved C-terminal domain FY137_13750 PF09382 RQC domain FY137_13755 PF00480 ROK family FY137_13760 PF13407 Periplasmic binding protein domain FY137_13765 PF02653 Branched-chain amino acid transport system / permease component FY137_13770 PF00005 ABC transporter FY137_13775 PF00485 Phosphoribulokinase / Uridine kinase family FY137_13780 PF00462 Glutaredoxin FY137_13785 PF07972 NrdI Flavodoxin like FY137_13790 PF08343 Ribonucleotide reductase N-terminal FY137_13790 PF00317 Ribonucleotide reductase, all-alpha domain FY137_13790 PF02867 Ribonucleotide reductase, barrel domain FY137_13795 PF00268 Ribonucleotide reductase, small chain FY137_13805 PF02463 RecF/RecN/SMC N terminal domain FY137_13810 PF00581 Rhodanese-like domain FY137_13810 PF00899 ThiF family FY137_13825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_13825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_13835 PF00294 pfkB family carbohydrate kinase FY137_13845 PF08468 Methyltransferase small domain N-terminal FY137_13845 PF05175 Methyltransferase small domain FY137_13850 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY137_13850 PF00013 KH domain FY137_13850 PF00575 S1 RNA binding domain FY137_13850 PF01138 3' exoribonuclease family, domain 1 FY137_13850 PF03725 3' exoribonuclease family, domain 2 FY137_13855 PF00312 Ribosomal protein S15 FY137_13860 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY137_13860 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY137_13860 PF09157 Pseudouridine synthase II TruB, C-terminal FY137_13865 PF02033 Ribosome-binding factor A FY137_13870 PF08364 Bacterial translation initiation factor IF-2 associated region FY137_13870 PF11987 Translation-initiation factor 2 FY137_13870 PF04760 Translation initiation factor IF-2, N-terminal region FY137_13870 PF00009 Elongation factor Tu GTP binding domain FY137_13870 PF03144 Elongation factor Tu domain 2 FY137_13880 PF00575 S1 RNA binding domain FY137_13880 PF13184 NusA-like KH domain FY137_13880 PF08529 NusA N-terminal domain FY137_13885 PF02576 RimP N-terminal domain FY137_13885 PF17384 RimP C-terminal SH3 domain FY137_13890 PF05977 Transmembrane secretion effector FY137_13900 PF13406 Transglycosylase SLT domain FY137_13905 PF02132 RecR protein FY137_13905 PF13662 Toprim domain FY137_13915 PF02575 YbaB/EbfC DNA-binding family FY137_13920 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY137_13920 PF12169 DNA polymerase III subunits gamma and tau domain III FY137_13920 PF12170 DNA polymerase III tau subunit V interacting with alpha FY137_13935 PF00293 NUDIX domain FY137_13935 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY137_13935 PF09297 NADH pyrophosphatase zinc ribbon domain FY137_13940 PF00800 Prephenate dehydratase FY137_13940 PF01817 Chorismate mutase type II FY137_13945 PF02348 Cytidylyltransferase FY137_13950 PF00034 Cytochrome c FY137_13955 PF02397 Bacterial sugar transferase FY137_13960 PF00912 Transglycosylase FY137_13960 PF00905 Penicillin binding protein transpeptidase domain FY137_13965 PF04073 Aminoacyl-tRNA editing domain FY137_13970 PF00313 'Cold-shock' DNA-binding domain FY137_13975 PF07687 Peptidase dimerisation domain FY137_13975 PF01546 Peptidase family M20/M25/M40 FY137_13980 PF01047 MarR family FY137_13985 PF01612 3'-5' exonuclease FY137_13985 PF01367 5'-3' exonuclease, C-terminal SAM fold FY137_13985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY137_13985 PF00476 DNA polymerase family A FY137_13995 PF01783 Ribosomal L32p protein family FY137_14000 PF02743 Cache domain FY137_14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_14000 PF00512 His Kinase A (phospho-acceptor) domain FY137_14005 PF00158 Sigma-54 interaction domain FY137_14005 PF00072 Response regulator receiver domain FY137_14005 PF02954 Bacterial regulatory protein, Fis family FY137_14010 PF03401 Tripartite tricarboxylate transporter family receptor FY137_14015 PF07331 Tripartite tricarboxylate transporter TctB family FY137_14020 PF01970 Tripartite tricarboxylate transporter TctA family FY137_14025 PF04102 SlyX FY137_14035 PF00684 DnaJ central domain FY137_14035 PF00226 DnaJ domain FY137_14035 PF01556 DnaJ C terminal domain FY137_14040 PF00012 Hsp70 protein FY137_14055 PF01625 Peptide methionine sulfoxide reductase FY137_14060 PF02608 ABC transporter substrate-binding protein PnrA-like FY137_14065 PF00005 ABC transporter FY137_14070 PF02653 Branched-chain amino acid transport system / permease component FY137_14075 PF02653 Branched-chain amino acid transport system / permease component FY137_14080 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY137_14085 PF01048 Phosphorylase superfamily FY137_14090 PF01791 DeoC/LacD family aldolase FY137_14095 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY137_14095 PF00591 Glycosyl transferase family, a/b domain FY137_14095 PF02885 Glycosyl transferase family, helical bundle domain FY137_14110 PF00962 Adenosine/AMP deaminase FY137_14115 PF01676 Metalloenzyme superfamily FY137_14125 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY137_14130 PF00510 Cytochrome c oxidase subunit III FY137_14135 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY137_14140 PF06481 COX Aromatic Rich Motif FY137_14140 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY137_14145 PF07690 Major Facilitator Superfamily FY137_14145 PF00083 Sugar (and other) transporter FY137_14150 PF00310 Glutamine amidotransferases class-II FY137_14150 PF04898 Glutamate synthase central domain FY137_14150 PF01493 GXGXG motif FY137_14150 PF01645 Conserved region in glutamate synthase FY137_14155 PF00258 Flavodoxin FY137_14155 PF00175 Oxidoreductase NAD-binding domain FY137_14155 PF00667 FAD binding domain FY137_14175 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_14175 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_14180 PF07977 FabA-like domain FY137_14190 PF03458 UPF0126 domain FY137_14200 PF06912 Protein of unknown function (DUF1275) FY137_14210 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14215 PF00005 ABC transporter FY137_14220 PF00392 Bacterial regulatory proteins, gntR family FY137_14220 PF07702 UTRA domain FY137_14225 PF01618 MotA/TolQ/ExbB proton channel family FY137_14230 PF02472 Biopolymer transport protein ExbD/TolR FY137_14240 PF02615 Malate/L-lactate dehydrogenase FY137_14255 PF00625 Guanylate kinase FY137_14260 PF07969 Amidohydrolase family FY137_14265 PF06299 Protein of unknown function (DUF1045) FY137_14270 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14275 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14285 PF00005 ABC transporter FY137_14295 PF00005 ABC transporter FY137_14300 PF00005 ABC transporter FY137_14305 PF06007 Phosphonate metabolism protein PhnJ FY137_14310 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY137_14315 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY137_14320 PF06754 Phosphonate metabolism protein PhnG FY137_14325 PF00392 Bacterial regulatory proteins, gntR family FY137_14325 PF07702 UTRA domain FY137_14330 PF05173 Dihydrodipicolinate reductase, C-terminus FY137_14330 PF01113 Dihydrodipicolinate reductase, N-terminus FY137_14335 PF02685 Glucokinase FY137_14340 PF02142 MGS-like domain FY137_14345 PF03411 Penicillin-insensitive murein endopeptidase FY137_14350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_14355 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14360 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14360 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_14365 PF00005 ABC transporter FY137_14365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_14370 PF01266 FAD dependent oxidoreductase FY137_14375 PF00120 Glutamine synthetase, catalytic domain FY137_14380 PF01266 FAD dependent oxidoreductase FY137_14390 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14395 PF00005 ABC transporter FY137_14400 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY137_14415 PF02082 Transcriptional regulator FY137_14420 PF13416 Bacterial extracellular solute-binding protein FY137_14430 PF05987 Bacterial protein of unknown function (DUF898) FY137_14435 PF00171 Aldehyde dehydrogenase family FY137_14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_14440 PF03466 LysR substrate binding domain FY137_14445 PF00892 EamA-like transporter family FY137_14460 PF00877 NlpC/P60 family FY137_14470 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY137_14470 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY137_14475 PF02789 Cytosol aminopeptidase family, N-terminal domain FY137_14475 PF00883 Cytosol aminopeptidase family, catalytic domain FY137_14495 PF00437 Type II/IV secretion system protein FY137_14510 PF04972 BON domain FY137_14510 PF13629 Pilus formation protein N terminal region FY137_14510 PF00263 Bacterial type II and III secretion system protein FY137_14550 PF00117 Glutamine amidotransferase class-I FY137_14555 PF07411 Domain of unknown function (DUF1508) FY137_14560 PF01183 Glycosyl hydrolases family 25 FY137_14565 PF00892 EamA-like transporter family FY137_14570 PF00392 Bacterial regulatory proteins, gntR family FY137_14570 PF00155 Aminotransferase class I and II FY137_14595 PF06421 GTP-binding protein LepA C-terminus FY137_14595 PF00679 Elongation factor G C-terminus FY137_14595 PF03144 Elongation factor Tu domain 2 FY137_14595 PF00009 Elongation factor Tu GTP binding domain FY137_14600 PF00795 Carbon-nitrogen hydrolase FY137_14630 PF02311 AraC-like ligand binding domain FY137_14630 PF12833 Helix-turn-helix domain FY137_14635 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_14660 PF00707 Translation initiation factor IF-3, C-terminal domain FY137_14660 PF05198 Translation initiation factor IF-3, N-terminal domain FY137_14665 PF01632 Ribosomal protein L35 FY137_14670 PF00453 Ribosomal protein L20 FY137_14680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY137_14680 PF01409 tRNA synthetases class II core domain (F) FY137_14685 PF03483 B3/4 domain FY137_14685 PF01588 Putative tRNA binding domain FY137_14685 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY137_14685 PF03484 tRNA synthetase B5 domain FY137_14685 PF03147 Ferredoxin-fold anticodon binding domain FY137_14690 PF00248 Aldo/keto reductase family FY137_14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_14695 PF03466 LysR substrate binding domain FY137_14705 PF00248 Aldo/keto reductase family FY137_14710 PF01965 DJ-1/PfpI family FY137_14710 PF12833 Helix-turn-helix domain FY137_14720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_14720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_14735 PF02601 Exonuclease VII, large subunit FY137_14735 PF13742 OB-fold nucleic acid binding domain FY137_14740 PF13378 Enolase C-terminal domain-like FY137_14740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_14745 PF07729 FCD domain FY137_14745 PF00392 Bacterial regulatory proteins, gntR family FY137_14750 PF01047 MarR family FY137_14755 PF00892 EamA-like transporter family FY137_14760 PF02073 Thermophilic metalloprotease (M29) FY137_14765 PF04073 Aminoacyl-tRNA editing domain FY137_14770 PF03960 ArsC family FY137_14795 PF00958 GMP synthase C terminal domain FY137_14795 PF00117 Glutamine amidotransferase class-I FY137_14810 PF03073 TspO/MBR family FY137_14835 PF01029 NusB family FY137_14835 PF01189 16S rRNA methyltransferase RsmB/F FY137_14840 PF03330 Lytic transglycolase FY137_14850 PF08331 Domain of unknown function (DUF1730) FY137_14855 PF13417 Glutathione S-transferase, N-terminal domain FY137_14855 PF00043 Glutathione S-transferase, C-terminal domain FY137_14860 PF02673 Bacitracin resistance protein BacA FY137_14875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY137_14885 PF00398 Ribosomal RNA adenine dimethylase FY137_14890 PF02767 DNA polymerase III beta subunit, central domain FY137_14890 PF02768 DNA polymerase III beta subunit, C-terminal domain FY137_14890 PF00712 DNA polymerase III beta subunit, N-terminal domain FY137_14895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_14900 PF02021 Uncharacterised protein family UPF0102 FY137_14905 PF12464 Maltose acetyltransferase FY137_14905 PF14602 Hexapeptide repeat of succinyl-transferase FY137_14910 PF13416 Bacterial extracellular solute-binding protein FY137_14915 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14920 PF00528 Binding-protein-dependent transport system inner membrane component FY137_14925 PF00005 ABC transporter FY137_14935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY137_14935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY137_14940 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY137_14940 PF01078 Magnesium chelatase, subunit ChlI FY137_14945 PF00291 Pyridoxal-phosphate dependent enzyme FY137_14950 PF01810 LysE type translocator FY137_14955 PF00692 dUTPase FY137_14960 PF03144 Elongation factor Tu domain 2 FY137_14960 PF16658 Class II release factor RF3, C-terminal domain FY137_14960 PF00009 Elongation factor Tu GTP binding domain FY137_14965 PF04127 DNA / pantothenate metabolism flavoprotein FY137_14965 PF02441 Flavoprotein FY137_14980 PF03109 ABC1 family FY137_14985 PF01209 ubiE/COQ5 methyltransferase family FY137_14990 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY137_14990 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY137_14990 PF06827 Zinc finger found in FPG and IleRS FY137_14995 PF00378 Enoyl-CoA hydratase/isomerase FY137_15000 PF01649 Ribosomal protein S20 FY137_15010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY137_15010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY137_15025 PF00144 Beta-lactamase FY137_15030 PF03466 LysR substrate binding domain FY137_15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_15065 PF01177 Asp/Glu/Hydantoin racemase FY137_15070 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15075 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15085 PF08402 TOBE domain FY137_15085 PF00005 ABC transporter FY137_15110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_15110 PF08447 PAS fold FY137_15110 PF13426 PAS domain FY137_15120 PF13416 Bacterial extracellular solute-binding protein FY137_15125 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15130 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15135 PF00005 ABC transporter FY137_15135 PF17912 MalK OB fold domain FY137_15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_15140 PF03466 LysR substrate binding domain FY137_15145 PF00135 Carboxylesterase family FY137_15150 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15155 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15160 PF00005 ABC transporter FY137_15160 PF08402 TOBE domain FY137_15170 PF01244 Membrane dipeptidase (Peptidase family M19) FY137_15175 PF01323 DSBA-like thioredoxin domain FY137_15180 PF13454 FAD-NAD(P)-binding FY137_15185 PF00296 Luciferase-like monooxygenase FY137_15190 PF09084 NMT1/THI5 like FY137_15195 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15200 PF00005 ABC transporter FY137_15210 PF07690 Major Facilitator Superfamily FY137_15215 PF01546 Peptidase family M20/M25/M40 FY137_15220 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15225 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15235 PF17912 MalK OB fold domain FY137_15235 PF00005 ABC transporter FY137_15240 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY137_15255 PF00356 Bacterial regulatory proteins, lacI family FY137_15265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_15265 PF01842 ACT domain FY137_15265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_15270 PF01261 Xylose isomerase-like TIM barrel FY137_15285 PF03459 TOBE domain FY137_15285 PF00005 ABC transporter FY137_15285 PF17912 MalK OB fold domain FY137_15290 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15295 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15300 PF13416 Bacterial extracellular solute-binding protein FY137_15305 PF00440 Bacterial regulatory proteins, tetR family FY137_15305 PF17938 Tetracyclin repressor-like, C-terminal domain FY137_15310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_15310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_15325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_15325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_15330 PF00313 'Cold-shock' DNA-binding domain FY137_15350 PF00550 Phosphopantetheine attachment site FY137_15355 PF12704 MacB-like periplasmic core domain FY137_15355 PF00005 ABC transporter FY137_15355 PF02687 FtsX-like permease family FY137_15360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_15375 PF00072 Response regulator receiver domain FY137_15375 PF00486 Transcriptional regulatory protein, C terminal FY137_15380 PF00672 HAMP domain FY137_15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_15380 PF00512 His Kinase A (phospho-acceptor) domain FY137_15385 PF07470 Glycosyl Hydrolase Family 88 FY137_15390 PF00295 Glycosyl hydrolases family 28 FY137_15400 PF08402 TOBE domain FY137_15400 PF00005 ABC transporter FY137_15405 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15410 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15415 PF12833 Helix-turn-helix domain FY137_15415 PF02311 AraC-like ligand binding domain FY137_15420 PF04909 Amidohydrolase FY137_15425 PF13378 Enolase C-terminal domain-like FY137_15425 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_15430 PF00701 Dihydrodipicolinate synthetase family FY137_15440 PF04962 KduI/IolB family FY137_15445 PF01370 NAD dependent epimerase/dehydratase family FY137_15450 PF07729 FCD domain FY137_15450 PF00392 Bacterial regulatory proteins, gntR family FY137_15460 PF00557 Metallopeptidase family M24 FY137_15460 PF01321 Creatinase/Prolidase N-terminal domain FY137_15465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_15465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_15470 PF00005 ABC transporter FY137_15470 PF17912 MalK OB fold domain FY137_15475 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15480 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15485 PF13416 Bacterial extracellular solute-binding protein FY137_15495 PF02311 AraC-like ligand binding domain FY137_15495 PF12833 Helix-turn-helix domain FY137_15500 PF07690 Major Facilitator Superfamily FY137_15505 PF03466 LysR substrate binding domain FY137_15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_15510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_15520 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_15525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY137_15525 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY137_15540 PF00356 Bacterial regulatory proteins, lacI family FY137_15545 PF08240 Alcohol dehydrogenase GroES-like domain FY137_15545 PF16912 Glucose dehydrogenase C-terminus FY137_15560 PF00294 pfkB family carbohydrate kinase FY137_15565 PF08013 Tagatose 6 phosphate kinase FY137_15570 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15575 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15580 PF00005 ABC transporter FY137_15580 PF08402 TOBE domain FY137_15585 PF17912 MalK OB fold domain FY137_15585 PF00005 ABC transporter FY137_15590 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15595 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15600 PF01547 Bacterial extracellular solute-binding protein FY137_15605 PF01053 Cys/Met metabolism PLP-dependent enzyme FY137_15620 PF01297 Zinc-uptake complex component A periplasmic FY137_15625 PF00950 ABC 3 transport family FY137_15630 PF00005 ABC transporter FY137_15635 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY137_15635 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY137_15650 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY137_15650 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY137_15655 PF13416 Bacterial extracellular solute-binding protein FY137_15660 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15665 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15670 PF08402 TOBE domain FY137_15670 PF00005 ABC transporter FY137_15680 PF03922 OmpW family FY137_15705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY137_15705 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY137_15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_15710 PF03466 LysR substrate binding domain FY137_15715 PF13407 Periplasmic binding protein domain FY137_15720 PF02653 Branched-chain amino acid transport system / permease component FY137_15725 PF00005 ABC transporter FY137_15730 PF00440 Bacterial regulatory proteins, tetR family FY137_15730 PF08361 MAATS-type transcriptional repressor, C-terminal region FY137_15735 PF00873 AcrB/AcrD/AcrF family FY137_15740 PF00529 HlyD membrane-fusion protein of T1SS FY137_15740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_15745 PF00990 Diguanylate cyclase, GGDEF domain FY137_15745 PF17151 Periplasmic sensor domain FY137_15750 PF05899 Protein of unknown function (DUF861) FY137_15750 PF07883 Cupin domain FY137_15760 PF00563 EAL domain FY137_15760 PF08448 PAS fold FY137_15760 PF08447 PAS fold FY137_15760 PF00990 Diguanylate cyclase, GGDEF domain FY137_15765 PF02615 Malate/L-lactate dehydrogenase FY137_15770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY137_15770 PF09397 Ftsk gamma domain FY137_15770 PF01580 FtsK/SpoIIIE family FY137_15770 PF17854 FtsK alpha domain FY137_15775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_15780 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15785 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_15790 PF00005 ABC transporter FY137_15795 PF00005 ABC transporter FY137_15795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_15800 PF00266 Aminotransferase class-V FY137_15810 PF12833 Helix-turn-helix domain FY137_15815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_15825 PF00920 Dehydratase family FY137_15830 PF13407 Periplasmic binding protein domain FY137_15835 PF00005 ABC transporter FY137_15840 PF02653 Branched-chain amino acid transport system / permease component FY137_15845 PF02653 Branched-chain amino acid transport system / permease component FY137_15850 PF07729 FCD domain FY137_15850 PF00392 Bacterial regulatory proteins, gntR family FY137_15855 PF07690 Major Facilitator Superfamily FY137_15865 PF08241 Methyltransferase domain FY137_15870 PF02811 PHP domain FY137_15870 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY137_15870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY137_15870 PF14579 Helix-hairpin-helix motif FY137_15870 PF01336 OB-fold nucleic acid binding domain FY137_15890 PF13660 Domain of unknown function (DUF4147) FY137_15890 PF05161 MOFRL family FY137_15900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_15900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_15910 PF00005 ABC transporter FY137_15910 PF03459 TOBE domain FY137_15910 PF17912 MalK OB fold domain FY137_15915 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15920 PF00528 Binding-protein-dependent transport system inner membrane component FY137_15925 PF01547 Bacterial extracellular solute-binding protein FY137_15935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_15945 PF01425 Amidase FY137_15950 PF00563 EAL domain FY137_15950 PF00990 Diguanylate cyclase, GGDEF domain FY137_15950 PF08447 PAS fold FY137_15950 PF08448 PAS fold FY137_15965 PF03776 Septum formation topological specificity factor MinE FY137_15970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY137_15975 PF03775 Septum formation inhibitor MinC, C-terminal domain FY137_15975 PF05209 Septum formation inhibitor MinC, N-terminal domain FY137_15980 PF13419 Haloacid dehalogenase-like hydrolase FY137_15995 PF07729 FCD domain FY137_15995 PF00392 Bacterial regulatory proteins, gntR family FY137_16000 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_16010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_16015 PF00107 Zinc-binding dehydrogenase FY137_16015 PF08240 Alcohol dehydrogenase GroES-like domain FY137_16020 PF03786 D-mannonate dehydratase (UxuA) FY137_16030 PF00171 Aldehyde dehydrogenase family FY137_16040 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_16045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_16045 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY137_16050 PF00296 Luciferase-like monooxygenase FY137_16065 PF00043 Glutathione S-transferase, C-terminal domain FY137_16065 PF02798 Glutathione S-transferase, N-terminal domain FY137_16070 PF00005 ABC transporter FY137_16070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_16075 PF03841 L-seryl-tRNA selenium transferase FY137_16090 PF01979 Amidohydrolase family FY137_16095 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_16095 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16100 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_16110 PF13439 Glycosyltransferase Family 4 FY137_16110 PF00534 Glycosyl transferases group 1 FY137_16115 PF02563 Polysaccharide biosynthesis/export protein FY137_16120 PF13533 Biotin-lipoyl like FY137_16125 PF00873 AcrB/AcrD/AcrF family FY137_16140 PF01613 Flavin reductase like domain FY137_16145 PF00248 Aldo/keto reductase family FY137_16150 PF00296 Luciferase-like monooxygenase FY137_16160 PF00005 ABC transporter FY137_16160 PF08402 TOBE domain FY137_16165 PF01547 Bacterial extracellular solute-binding protein FY137_16170 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16175 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16180 PF01055 Glycosyl hydrolases family 31 FY137_16190 PF00665 Integrase core domain FY137_16195 PF01695 IstB-like ATP binding protein FY137_16210 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16215 PF09084 NMT1/THI5 like FY137_16220 PF02110 Hydroxyethylthiazole kinase family FY137_16225 PF02581 Thiamine monophosphate synthase FY137_16230 PF08543 Phosphomethylpyrimidine kinase FY137_16235 PF01037 Lrp/AsnC ligand binding domain FY137_16240 PF00842 Alanine racemase, C-terminal domain FY137_16240 PF01168 Alanine racemase, N-terminal domain FY137_16245 PF01266 FAD dependent oxidoreductase FY137_16260 PF00158 Sigma-54 interaction domain FY137_16260 PF00072 Response regulator receiver domain FY137_16260 PF02954 Bacterial regulatory protein, Fis family FY137_16265 PF00512 His Kinase A (phospho-acceptor) domain FY137_16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_16270 PF00375 Sodium:dicarboxylate symporter family FY137_16275 PF00892 EamA-like transporter family FY137_16280 PF00202 Aminotransferase class-III FY137_16295 PF07687 Peptidase dimerisation domain FY137_16295 PF01546 Peptidase family M20/M25/M40 FY137_16305 PF01270 Glycosyl hydrolases family 8 FY137_16315 PF07238 PilZ domain FY137_16315 PF00535 Glycosyl transferase family 2 FY137_16315 PF03552 Cellulose synthase FY137_16345 PF16363 GDP-mannose 4,6 dehydratase FY137_16350 PF01370 NAD dependent epimerase/dehydratase family FY137_16360 PF00196 Bacterial regulatory proteins, luxR family FY137_16360 PF00072 Response regulator receiver domain FY137_16375 PF00664 ABC transporter transmembrane region FY137_16375 PF00005 ABC transporter FY137_16380 PF00529 HlyD membrane-fusion protein of T1SS FY137_16395 PF02563 Polysaccharide biosynthesis/export protein FY137_16400 PF02397 Bacterial sugar transferase FY137_16410 PF00202 Aminotransferase class-III FY137_16415 PF17969 L,D-transpeptidase C-terminal domain FY137_16415 PF03734 L,D-transpeptidase catalytic domain FY137_16435 PF02245 Methylpurine-DNA glycosylase (MPG) FY137_16450 PF00356 Bacterial regulatory proteins, lacI family FY137_16455 PF01547 Bacterial extracellular solute-binding protein FY137_16460 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16465 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16470 PF08402 TOBE domain FY137_16470 PF00005 ABC transporter FY137_16480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_16480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_16485 PF04055 Radical SAM superfamily FY137_16490 PF01242 6-pyruvoyl tetrahydropterin synthase FY137_16495 PF06508 Queuosine biosynthesis protein QueC FY137_16500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_16500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_16510 PF17912 MalK OB fold domain FY137_16510 PF00005 ABC transporter FY137_16515 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16520 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16525 PF01547 Bacterial extracellular solute-binding protein FY137_16535 PF00483 Nucleotidyl transferase FY137_16535 PF01050 Mannose-6-phosphate isomerase FY137_16540 PF01011 PQQ enzyme repeat FY137_16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_16545 PF03466 LysR substrate binding domain FY137_16550 PF00390 Malic enzyme, N-terminal domain FY137_16550 PF03949 Malic enzyme, NAD binding domain FY137_16550 PF01515 Phosphate acetyl/butaryl transferase FY137_16555 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_16560 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16565 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16570 PF00005 ABC transporter FY137_16575 PF03972 MmgE/PrpD family FY137_16580 PF00296 Luciferase-like monooxygenase FY137_16585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_16585 PF13426 PAS domain FY137_16585 PF08447 PAS fold FY137_16590 PF01266 FAD dependent oxidoreductase FY137_16605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY137_16610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_16615 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_16620 PF07722 Peptidase C26 FY137_16625 PF02653 Branched-chain amino acid transport system / permease component FY137_16630 PF00005 ABC transporter FY137_16635 PF13407 Periplasmic binding protein domain FY137_16640 PF01546 Peptidase family M20/M25/M40 FY137_16645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_16655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_16655 PF00005 ABC transporter FY137_16660 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_16660 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16665 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_16670 PF03466 LysR substrate binding domain FY137_16675 PF01112 Asparaginase FY137_16690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_16705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_16705 PF00005 ABC transporter FY137_16710 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16710 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_16715 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16720 PF00072 Response regulator receiver domain FY137_16720 PF00196 Bacterial regulatory proteins, luxR family FY137_16725 PF03737 Aldolase/RraA FY137_16730 PF01370 NAD dependent epimerase/dehydratase family FY137_16735 PF00920 Dehydratase family FY137_16740 PF00005 ABC transporter FY137_16740 PF08402 TOBE domain FY137_16745 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16750 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_16760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_16765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_16765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_16770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_16770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_16775 PF07729 FCD domain FY137_16775 PF00392 Bacterial regulatory proteins, gntR family FY137_16785 PF00529 HlyD membrane-fusion protein of T1SS FY137_16785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_16790 PF00005 ABC transporter FY137_16790 PF00664 ABC transporter transmembrane region FY137_16810 PF04542 Sigma-70 region 2 FY137_16810 PF08281 Sigma-70, region 4 FY137_16810 PF12680 SnoaL-like domain FY137_16815 PF00005 ABC transporter FY137_16820 PF01032 FecCD transport family FY137_16835 PF01209 ubiE/COQ5 methyltransferase family FY137_16840 PF00127 Copper binding proteins, plastocyanin/azurin family FY137_16845 PF00005 ABC transporter FY137_16850 PF01032 FecCD transport family FY137_16865 PF01546 Peptidase family M20/M25/M40 FY137_16865 PF07687 Peptidase dimerisation domain FY137_16870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_16885 PF01968 Hydantoinase/oxoprolinase FY137_16885 PF05378 Hydantoinase/oxoprolinase N-terminal region FY137_16895 PF00171 Aldehyde dehydrogenase family FY137_16900 PF00180 Isocitrate/isopropylmalate dehydrogenase FY137_16905 PF00171 Aldehyde dehydrogenase family FY137_16915 PF01266 FAD dependent oxidoreductase FY137_16935 PF00202 Aminotransferase class-III FY137_16945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_16950 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16955 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_16955 PF00528 Binding-protein-dependent transport system inner membrane component FY137_16960 PF00005 ABC transporter FY137_16960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_16965 PF01037 Lrp/AsnC ligand binding domain FY137_16970 PF01266 FAD dependent oxidoreductase FY137_16975 PF01266 FAD dependent oxidoreductase FY137_16980 PF04324 BFD-like [2Fe-2S] binding domain FY137_16980 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_16990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_16990 PF03466 LysR substrate binding domain FY137_17000 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_17005 PF00005 ABC transporter FY137_17015 PF01546 Peptidase family M20/M25/M40 FY137_17015 PF07687 Peptidase dimerisation domain FY137_17020 PF00296 Luciferase-like monooxygenase FY137_17025 PF00296 Luciferase-like monooxygenase FY137_17030 PF02082 Transcriptional regulator FY137_17040 PF01613 Flavin reductase like domain FY137_17045 PF00296 Luciferase-like monooxygenase FY137_17060 PF00581 Rhodanese-like domain FY137_17070 PF00296 Luciferase-like monooxygenase FY137_17075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_17075 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_17075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_17085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_17090 PF00528 Binding-protein-dependent transport system inner membrane component FY137_17095 PF00528 Binding-protein-dependent transport system inner membrane component FY137_17100 PF00005 ABC transporter FY137_17100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_17105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_17105 PF00005 ABC transporter FY137_17110 PF00248 Aldo/keto reductase family FY137_17120 PF03466 LysR substrate binding domain FY137_17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_17125 PF00296 Luciferase-like monooxygenase FY137_17130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_17140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_17145 PF01546 Peptidase family M20/M25/M40 FY137_17145 PF07687 Peptidase dimerisation domain FY137_17150 PF00296 Luciferase-like monooxygenase FY137_17155 PF13460 NAD(P)H-binding FY137_17165 PF00296 Luciferase-like monooxygenase FY137_17170 PF00296 Luciferase-like monooxygenase FY137_17175 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_17175 PF13378 Enolase C-terminal domain-like FY137_17185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_17190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_17190 PF00005 ABC transporter FY137_17195 PF00005 ABC transporter FY137_17195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_17200 PF00528 Binding-protein-dependent transport system inner membrane component FY137_17200 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_17205 PF00528 Binding-protein-dependent transport system inner membrane component FY137_17215 PF00392 Bacterial regulatory proteins, gntR family FY137_17215 PF07729 FCD domain FY137_17225 PF00561 alpha/beta hydrolase fold FY137_17230 PF00106 short chain dehydrogenase FY137_17240 PF04273 Putative phosphatase (DUF442) FY137_17240 PF00753 Metallo-beta-lactamase superfamily FY137_17250 PF04143 Sulphur transport FY137_17260 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY137_17260 PF01676 Metalloenzyme superfamily FY137_17265 PF02817 e3 binding domain FY137_17265 PF00364 Biotin-requiring enzyme FY137_17265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY137_17270 PF02779 Transketolase, pyrimidine binding domain FY137_17270 PF02780 Transketolase, C-terminal domain FY137_17275 PF00676 Dehydrogenase E1 component FY137_17275 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY137_17280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_17280 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_17280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_17285 PF02803 Thiolase, C-terminal domain FY137_17285 PF00108 Thiolase, N-terminal domain FY137_17290 PF01037 Lrp/AsnC ligand binding domain FY137_17295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_17295 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_17295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_17300 PF01039 Carboxyl transferase domain FY137_17305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_17305 PF02785 Biotin carboxylase C-terminal domain FY137_17305 PF00289 Biotin carboxylase, N-terminal domain FY137_17305 PF00364 Biotin-requiring enzyme FY137_17310 PF00682 HMGL-like FY137_17315 PF00378 Enoyl-CoA hydratase/isomerase FY137_17320 PF02569 Pantoate-beta-alanine ligase FY137_17325 PF02548 Ketopantoate hydroxymethyltransferase FY137_17330 PF01261 Xylose isomerase-like TIM barrel FY137_17335 PF00596 Class II Aldolase and Adducin N-terminal domain FY137_17340 PF00455 DeoR C terminal sensor domain FY137_17340 PF08220 DeoR-like helix-turn-helix domain FY137_17345 PF13407 Periplasmic binding protein domain FY137_17350 PF00005 ABC transporter FY137_17355 PF02653 Branched-chain amino acid transport system / permease component FY137_17360 PF02653 Branched-chain amino acid transport system / permease component FY137_17365 PF05336 L-rhamnose mutarotase FY137_17375 PF00561 alpha/beta hydrolase fold FY137_17385 PF08448 PAS fold FY137_17385 PF00990 Diguanylate cyclase, GGDEF domain FY137_17385 PF00563 EAL domain FY137_17385 PF08447 PAS fold FY137_17395 PF00171 Aldehyde dehydrogenase family FY137_17400 PF08713 DNA alkylation repair enzyme FY137_17405 PF00005 ABC transporter FY137_17410 PF00528 Binding-protein-dependent transport system inner membrane component FY137_17415 PF00528 Binding-protein-dependent transport system inner membrane component FY137_17425 PF00378 Enoyl-CoA hydratase/isomerase FY137_17440 PF08241 Methyltransferase domain FY137_17450 PF00795 Carbon-nitrogen hydrolase FY137_17455 PF00462 Glutaredoxin FY137_17465 PF08241 Methyltransferase domain FY137_17480 PF00293 NUDIX domain FY137_17485 PF13508 Acetyltransferase (GNAT) domain FY137_17485 PF00583 Acetyltransferase (GNAT) family FY137_17490 PF01960 ArgJ family FY137_17500 PF02810 SEC-C motif FY137_17500 PF07517 SecA DEAD-like domain FY137_17500 PF01043 SecA preprotein cross-linking domain FY137_17500 PF07516 SecA Wing and Scaffold domain FY137_17505 PF00892 EamA-like transporter family FY137_17510 PF01757 Acyltransferase family FY137_17580 PF01943 Polysaccharide biosynthesis protein FY137_17585 PF13439 Glycosyltransferase Family 4 FY137_17585 PF00534 Glycosyl transferases group 1 FY137_17595 PF01757 Acyltransferase family FY137_17605 PF02706 Chain length determinant protein FY137_17605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY137_17605 PF13807 G-rich domain on putative tyrosine kinase FY137_17625 PF13439 Glycosyltransferase Family 4 FY137_17625 PF00534 Glycosyl transferases group 1 FY137_17630 PF13439 Glycosyltransferase Family 4 FY137_17630 PF00534 Glycosyl transferases group 1 FY137_17645 PF01272 Transcription elongation factor, GreA/GreB, C-term FY137_17645 PF03449 Transcription elongation factor, N-terminal FY137_17650 PF00722 Glycosyl hydrolases family 16 FY137_17650 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY137_17680 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY137_17695 PF01381 Helix-turn-helix FY137_17705 PF08267 Cobalamin-independent synthase, N-terminal domain FY137_17705 PF01717 Cobalamin-independent synthase, Catalytic domain FY137_17710 PF00005 ABC transporter FY137_17715 PF02653 Branched-chain amino acid transport system / permease component FY137_17720 PF13407 Periplasmic binding protein domain FY137_17730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY137_17730 PF01266 FAD dependent oxidoreductase FY137_17740 PF02310 B12 binding domain FY137_17740 PF01642 Methylmalonyl-CoA mutase FY137_17745 PF02785 Biotin carboxylase C-terminal domain FY137_17745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_17745 PF00364 Biotin-requiring enzyme FY137_17745 PF18140 Propionyl-coenzyme A carboxylase BT domain FY137_17745 PF00289 Biotin carboxylase, N-terminal domain FY137_17760 PF02798 Glutathione S-transferase, N-terminal domain FY137_17765 PF01039 Carboxyl transferase domain FY137_17770 PF09856 Predicted transcriptional regulator (DUF2083) FY137_17770 PF06114 IrrE N-terminal-like domain FY137_17770 PF01381 Helix-turn-helix FY137_17775 PF12833 Helix-turn-helix domain FY137_17775 PF00730 HhH-GPD superfamily base excision DNA repair protein FY137_17775 PF06029 AlkA N-terminal domain FY137_17775 PF02805 Metal binding domain of Ada FY137_17780 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY137_17790 PF00106 short chain dehydrogenase FY137_17800 PF01923 Cobalamin adenosyltransferase FY137_17810 PF01012 Electron transfer flavoprotein domain FY137_17815 PF01012 Electron transfer flavoprotein domain FY137_17815 PF00766 Electron transfer flavoprotein FAD-binding domain FY137_17820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY137_17820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY137_17830 PF08534 Redoxin FY137_17835 PF14698 Argininosuccinate lyase C-terminal FY137_17835 PF00206 Lyase FY137_17845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY137_17845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY137_17855 PF00072 Response regulator receiver domain FY137_17860 PF00156 Phosphoribosyl transferase domain FY137_17870 PF00005 ABC transporter FY137_17890 PF04752 ChaC-like protein FY137_17905 PF02153 Prephenate dehydrogenase FY137_17910 PF00155 Aminotransferase class I and II FY137_17915 PF01209 ubiE/COQ5 methyltransferase family FY137_17920 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY137_17920 PF00753 Metallo-beta-lactamase superfamily FY137_17935 PF00830 Ribosomal L28 family FY137_17940 PF02592 Putative vitamin uptake transporter FY137_17955 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY137_17955 PF06213 Cobalamin biosynthesis protein CobT FY137_17960 PF07728 AAA domain (dynein-related subfamily) FY137_17960 PF08406 CbbQ/NirQ/NorQ C-terminal FY137_17960 PF12556 Cobaltochelatase CobS subunit N terminal FY137_17965 PF00226 DnaJ domain FY137_17970 PF01722 BolA-like protein FY137_17975 PF01761 3-dehydroquinate synthase FY137_17980 PF01202 Shikimate kinase FY137_17990 PF00589 Phage integrase family FY137_17990 PF02899 Phage integrase, N-terminal SAM-like domain FY137_17995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY137_18000 PF03734 L,D-transpeptidase catalytic domain FY137_18005 PF00581 Rhodanese-like domain FY137_18005 PF01206 Sulfurtransferase TusA FY137_18010 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY137_18010 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY137_18015 PF07943 Penicillin-binding protein 5, C-terminal domain FY137_18015 PF00768 D-alanyl-D-alanine carboxypeptidase FY137_18020 PF07687 Peptidase dimerisation domain FY137_18020 PF01546 Peptidase family M20/M25/M40 FY137_18030 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_18030 PF01464 Transglycosylase SLT domain FY137_18035 PF00330 Aconitase family (aconitate hydratase) FY137_18035 PF00694 Aconitase C-terminal domain FY137_18040 PF07690 Major Facilitator Superfamily FY137_18045 PF10282 Lactonase, 7-bladed beta-propeller FY137_18055 PF01970 Tripartite tricarboxylate transporter TctA family FY137_18075 PF01970 Tripartite tricarboxylate transporter TctA family FY137_18090 PF00672 HAMP domain FY137_18090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_18090 PF00512 His Kinase A (phospho-acceptor) domain FY137_18095 PF00072 Response regulator receiver domain FY137_18095 PF00486 Transcriptional regulatory protein, C terminal FY137_18105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_18105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_18120 PF01261 Xylose isomerase-like TIM barrel FY137_18125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY137_18125 PF00205 Thiamine pyrophosphate enzyme, central domain FY137_18125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY137_18130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_18130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_18135 PF00171 Aldehyde dehydrogenase family FY137_18140 PF03328 HpcH/HpaI aldolase/citrate lyase family FY137_18145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_18145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_18150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_18150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_18165 PF02653 Branched-chain amino acid transport system / permease component FY137_18170 PF00005 ABC transporter FY137_18175 PF13407 Periplasmic binding protein domain FY137_18180 PF06832 Penicillin-Binding Protein C-terminus Family FY137_18180 PF00912 Transglycosylase FY137_18180 PF00905 Penicillin binding protein transpeptidase domain FY137_18185 PF07678 A-macroglobulin TED domain FY137_18185 PF01835 MG2 domain FY137_18185 PF17962 Bacterial macroglobulin domain 6 FY137_18185 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY137_18185 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY137_18185 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY137_18185 PF07703 Alpha-2-macroglobulin bait region domain FY137_18185 PF00207 Alpha-2-macroglobulin family FY137_18185 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY137_18190 PF03966 Trm112p-like protein FY137_18200 PF00085 Thioredoxin FY137_18330 PF01695 IstB-like ATP binding protein FY137_18335 PF00665 Integrase core domain FY137_18430 PF01842 ACT domain FY137_18430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_18430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_18440 PF13505 Outer membrane protein beta-barrel domain FY137_18445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY137_18445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY137_18445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY137_18445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY137_18450 PF01434 Peptidase family M41 FY137_18450 PF17862 AAA+ lid domain FY137_18450 PF00004 ATPase family associated with various cellular activities (AAA) FY137_18450 PF06480 FtsH Extracellular FY137_18455 PF01171 PP-loop family FY137_18465 PF00691 OmpA family FY137_18470 PF07676 WD40-like Beta Propeller Repeat FY137_18470 PF04052 TolB amino-terminal domain FY137_18480 PF02472 Biopolymer transport protein ExbD/TolR FY137_18485 PF01618 MotA/TolQ/ExbB proton channel family FY137_18490 PF03061 Thioesterase superfamily FY137_18495 PF00293 NUDIX domain FY137_18500 PF00293 NUDIX domain FY137_18515 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY137_18515 PF17864 RuvB AAA lid domain FY137_18515 PF05491 RuvB C-terminal winged helix domain FY137_18530 PF01330 RuvA N terminal domain FY137_18530 PF07499 RuvA, C-terminal domain FY137_18535 PF02075 Crossover junction endodeoxyribonuclease RuvC FY137_18540 PF00672 HAMP domain FY137_18540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_18545 PF00296 Luciferase-like monooxygenase FY137_18550 PF01709 Transcriptional regulator FY137_18565 PF13277 YmdB-like protein FY137_18575 PF00571 CBS domain FY137_18575 PF03471 Transporter associated domain FY137_18575 PF01595 Cyclin M transmembrane N-terminal domain FY137_18595 PF02779 Transketolase, pyrimidine binding domain FY137_18595 PF02780 Transketolase, C-terminal domain FY137_18595 PF00456 Transketolase, thiamine diphosphate binding domain FY137_18600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY137_18600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY137_18610 PF00999 Sodium/hydrogen exchanger family FY137_18610 PF03471 Transporter associated domain FY137_18615 PF00162 Phosphoglycerate kinase FY137_18620 PF00274 Fructose-bisphosphate aldolase class-I FY137_18625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_18630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY137_18630 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_18640 PF01614 Bacterial transcriptional regulator FY137_18640 PF09339 IclR helix-turn-helix domain FY137_18650 PF13193 AMP-binding enzyme C-terminal domain FY137_18650 PF00501 AMP-binding enzyme FY137_18675 PF01037 Lrp/AsnC ligand binding domain FY137_18695 PF01197 Ribosomal protein L31 FY137_18700 PF00005 ABC transporter FY137_18700 PF00664 ABC transporter transmembrane region FY137_18705 PF00890 FAD binding domain FY137_18715 PF01389 OmpA-like transmembrane domain FY137_18715 PF00691 OmpA family FY137_18725 PF00459 Inositol monophosphatase family FY137_18755 PF00731 AIR carboxylase FY137_18760 PF02222 ATP-grasp domain FY137_18760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY137_18765 PF00444 Ribosomal protein L36 FY137_18780 PF01695 IstB-like ATP binding protein FY137_18785 PF00665 Integrase core domain FY137_18800 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY137_18825 PF00224 Pyruvate kinase, barrel domain FY137_18825 PF02887 Pyruvate kinase, alpha/beta domain FY137_18830 PF05951 Bacterial protein of unknown function (DUF882) FY137_18835 PF00158 Sigma-54 interaction domain FY137_18835 PF02954 Bacterial regulatory protein, Fis family FY137_18835 PF00072 Response regulator receiver domain FY137_18840 PF08439 Oligopeptidase F FY137_18840 PF01432 Peptidase family M3 FY137_18845 PF01063 Amino-transferase class IV FY137_18850 PF00990 Diguanylate cyclase, GGDEF domain FY137_18855 PF03435 Saccharopine dehydrogenase NADP binding domain FY137_18855 PF16653 Saccharopine dehydrogenase C-terminal domain FY137_18865 PF00149 Calcineurin-like phosphoesterase FY137_18865 PF02872 5'-nucleotidase, C-terminal domain FY137_18870 PF00762 Ferrochelatase FY137_18875 PF16200 C-terminal region of band_7 FY137_18875 PF01145 SPFH domain / Band 7 family FY137_18885 PF01380 SIS domain FY137_18885 PF00571 CBS domain FY137_18900 PF00483 Nucleotidyl transferase FY137_18905 PF13406 Transglycosylase SLT domain FY137_18915 PF00486 Transcriptional regulatory protein, C terminal FY137_18915 PF00072 Response regulator receiver domain FY137_18920 PF00512 His Kinase A (phospho-acceptor) domain FY137_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_18920 PF00672 HAMP domain FY137_18925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY137_18925 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_18935 PF01645 Conserved region in glutamate synthase FY137_18935 PF01493 GXGXG motif FY137_18935 PF04898 Glutamate synthase central domain FY137_18935 PF00310 Glutamine amidotransferases class-II FY137_18940 PF01212 Beta-eliminating lyase FY137_18945 PF00072 Response regulator receiver domain FY137_18945 PF00486 Transcriptional regulatory protein, C terminal FY137_18950 PF00512 His Kinase A (phospho-acceptor) domain FY137_18950 PF02702 Osmosensitive K+ channel His kinase sensor domain FY137_18950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_18950 PF13492 GAF domain FY137_18950 PF13493 Domain of unknown function (DUF4118) FY137_18955 PF02669 K+-transporting ATPase, c chain FY137_18965 PF03814 Potassium-transporting ATPase A subunit FY137_18975 PF17763 Glutaminase/Asparaginase C-terminal domain FY137_18975 PF00710 Asparaginase, N-terminal FY137_18980 PF00324 Amino acid permease FY137_18985 PF10415 Fumarase C C-terminus FY137_18985 PF00206 Lyase FY137_18990 PF07729 FCD domain FY137_18990 PF00392 Bacterial regulatory proteins, gntR family FY137_18995 PF00873 AcrB/AcrD/AcrF family FY137_19005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_19005 PF00529 HlyD membrane-fusion protein of T1SS FY137_19015 PF00171 Aldehyde dehydrogenase family FY137_19020 PF00005 ABC transporter FY137_19020 PF08402 TOBE domain FY137_19025 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19030 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19045 PF00171 Aldehyde dehydrogenase family FY137_19050 PF00296 Luciferase-like monooxygenase FY137_19055 PF01613 Flavin reductase like domain FY137_19060 PF12697 Alpha/beta hydrolase family FY137_19070 PF07702 UTRA domain FY137_19070 PF00392 Bacterial regulatory proteins, gntR family FY137_19085 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19090 PF00571 CBS domain FY137_19090 PF00005 ABC transporter FY137_19095 PF00221 Aromatic amino acid lyase FY137_19100 PF07729 FCD domain FY137_19100 PF00392 Bacterial regulatory proteins, gntR family FY137_19105 PF00551 Formyl transferase FY137_19110 PF00120 Glutamine synthetase, catalytic domain FY137_19115 PF01645 Conserved region in glutamate synthase FY137_19120 PF01493 GXGXG motif FY137_19135 PF12833 Helix-turn-helix domain FY137_19135 PF01965 DJ-1/PfpI family FY137_19140 PF01266 FAD dependent oxidoreductase FY137_19145 PF04267 Sarcosine oxidase, delta subunit family FY137_19150 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY137_19150 PF17806 Sarcosine oxidase A3 domain FY137_19150 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_19150 PF01571 Aminomethyltransferase folate-binding domain FY137_19160 PF00356 Bacterial regulatory proteins, lacI family FY137_19170 PF02653 Branched-chain amino acid transport system / permease component FY137_19175 PF00005 ABC transporter FY137_19180 PF01261 Xylose isomerase-like TIM barrel FY137_19185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_19185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_19190 PF01261 Xylose isomerase-like TIM barrel FY137_19195 PF01261 Xylose isomerase-like TIM barrel FY137_19200 PF04371 Porphyromonas-type peptidyl-arginine deiminase FY137_19225 PF00145 C-5 cytosine-specific DNA methylase FY137_19240 PF02796 Helix-turn-helix domain of resolvase FY137_19240 PF00239 Resolvase, N terminal domain FY137_19250 PF00589 Phage integrase family FY137_19265 PF00069 Protein kinase domain FY137_19280 PF00701 Dihydrodipicolinate synthetase family FY137_19285 PF00005 ABC transporter FY137_19285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_19290 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_19290 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19295 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_19310 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY137_19315 PF00465 Iron-containing alcohol dehydrogenase FY137_19320 PF07729 FCD domain FY137_19320 PF00392 Bacterial regulatory proteins, gntR family FY137_19335 PF03061 Thioesterase superfamily FY137_19355 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY137_19355 PF14403 Circularly permuted ATP-grasp type 2 FY137_19360 PF08379 Bacterial transglutaminase-like N-terminal region FY137_19360 PF01841 Transglutaminase-like superfamily FY137_19370 PF12848 ABC transporter FY137_19370 PF00005 ABC transporter FY137_19375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_19375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_19380 PF07729 FCD domain FY137_19380 PF00392 Bacterial regulatory proteins, gntR family FY137_19395 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19400 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19405 PF07470 Glycosyl Hydrolase Family 88 FY137_19410 PF03459 TOBE domain FY137_19410 PF17912 MalK OB fold domain FY137_19410 PF00005 ABC transporter FY137_19420 PF01547 Bacterial extracellular solute-binding protein FY137_19430 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_19435 PF01070 FMN-dependent dehydrogenase FY137_19450 PF00107 Zinc-binding dehydrogenase FY137_19450 PF08240 Alcohol dehydrogenase GroES-like domain FY137_19455 PF03737 Aldolase/RraA FY137_19460 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_19465 PF00005 ABC transporter FY137_19470 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19475 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19480 PF00106 short chain dehydrogenase FY137_19485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_19485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_19495 PF01370 NAD dependent epimerase/dehydratase family FY137_19500 PF01970 Tripartite tricarboxylate transporter TctA family FY137_19510 PF03737 Aldolase/RraA FY137_19515 PF03401 Tripartite tricarboxylate transporter family receptor FY137_19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_19520 PF03466 LysR substrate binding domain FY137_19525 PF00892 EamA-like transporter family FY137_19530 PF00892 EamA-like transporter family FY137_19535 PF00364 Biotin-requiring enzyme FY137_19540 PF02785 Biotin carboxylase C-terminal domain FY137_19540 PF00289 Biotin carboxylase, N-terminal domain FY137_19540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_19550 PF02682 Carboxyltransferase domain, subdomain C and D FY137_19555 PF02626 Carboxyltransferase domain, subdomain A and B FY137_19560 PF03746 LamB/YcsF family FY137_19565 PF00005 ABC transporter FY137_19565 PF08402 TOBE domain FY137_19575 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19580 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19585 PF00155 Aminotransferase class I and II FY137_19590 PF00106 short chain dehydrogenase FY137_19595 PF03466 LysR substrate binding domain FY137_19595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_19605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_19605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_19610 PF01791 DeoC/LacD family aldolase FY137_19615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY137_19615 PF01266 FAD dependent oxidoreductase FY137_19620 PF00248 Aldo/keto reductase family FY137_19630 PF02653 Branched-chain amino acid transport system / permease component FY137_19635 PF00005 ABC transporter FY137_19640 PF13407 Periplasmic binding protein domain FY137_19645 PF00550 Phosphopantetheine attachment site FY137_19655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY137_19655 PF00356 Bacterial regulatory proteins, lacI family FY137_19660 PF00890 FAD binding domain FY137_19660 PF04205 FMN-binding domain FY137_19670 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19675 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19680 PF03459 TOBE domain FY137_19680 PF17912 MalK OB fold domain FY137_19680 PF00005 ABC transporter FY137_19685 PF02355 Protein export membrane protein FY137_19685 PF07549 SecD/SecF GG Motif FY137_19690 PF03466 LysR substrate binding domain FY137_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_19695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_19700 PF00701 Dihydrodipicolinate synthetase family FY137_19705 PF01156 Inosine-uridine preferring nucleoside hydrolase FY137_19710 PF01156 Inosine-uridine preferring nucleoside hydrolase FY137_19715 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19720 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_19720 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19725 PF00005 ABC transporter FY137_19725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_19730 PF00294 pfkB family carbohydrate kinase FY137_19735 PF00005 ABC transporter FY137_19735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_19740 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19740 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_19745 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_19760 PF00072 Response regulator receiver domain FY137_19770 PF00459 Inositol monophosphatase family FY137_19780 PF00011 Hsp20/alpha crystallin family FY137_19785 PF13593 SBF-like CPA transporter family (DUF4137) FY137_19790 PF03466 LysR substrate binding domain FY137_19790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_19795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_19795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_19810 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19815 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19820 PF00005 ABC transporter FY137_19820 PF17912 MalK OB fold domain FY137_19825 PF00005 ABC transporter FY137_19825 PF08402 TOBE domain FY137_19830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY137_19830 PF01266 FAD dependent oxidoreductase FY137_19835 PF00455 DeoR C terminal sensor domain FY137_19835 PF08220 DeoR-like helix-turn-helix domain FY137_19840 PF00551 Formyl transferase FY137_19850 PF01571 Aminomethyltransferase folate-binding domain FY137_19860 PF00440 Bacterial regulatory proteins, tetR family FY137_19865 PF00005 ABC transporter FY137_19870 PF00005 ABC transporter FY137_19875 PF02653 Branched-chain amino acid transport system / permease component FY137_19880 PF02653 Branched-chain amino acid transport system / permease component FY137_19890 PF13417 Glutathione S-transferase, N-terminal domain FY137_19895 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY137_19900 PF13193 AMP-binding enzyme C-terminal domain FY137_19900 PF00501 AMP-binding enzyme FY137_19905 PF01494 FAD binding domain FY137_19925 PF07883 Cupin domain FY137_19930 PF14824 Sirohaem biosynthesis protein central FY137_19930 PF10414 Sirohaem synthase dimerisation region FY137_19930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY137_19935 PF04324 BFD-like [2Fe-2S] binding domain FY137_19935 PF00384 Molybdopterin oxidoreductase FY137_19935 PF01568 Molydopterin dinucleotide binding domain FY137_19935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY137_19945 PF04324 BFD-like [2Fe-2S] binding domain FY137_19945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY137_19945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY137_19945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_19945 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY137_19950 PF00005 ABC transporter FY137_19955 PF00528 Binding-protein-dependent transport system inner membrane component FY137_19970 PF03861 ANTAR domain FY137_19970 PF08376 Nitrate and nitrite sensing FY137_19975 PF00392 Bacterial regulatory proteins, gntR family FY137_19975 PF07729 FCD domain FY137_19980 PF01566 Natural resistance-associated macrophage protein FY137_19985 PF03746 LamB/YcsF family FY137_19990 PF07286 Protein of unknown function (DUF1445) FY137_19995 PF02682 Carboxyltransferase domain, subdomain C and D FY137_20000 PF00364 Biotin-requiring enzyme FY137_20000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_20000 PF02785 Biotin carboxylase C-terminal domain FY137_20000 PF00289 Biotin carboxylase, N-terminal domain FY137_20005 PF00128 Alpha amylase, catalytic domain FY137_20005 PF02806 Alpha amylase, C-terminal all-beta domain FY137_20010 PF00376 MerR family regulatory protein FY137_20010 PF09278 MerR, DNA binding FY137_20015 PF07715 TonB-dependent Receptor Plug Domain FY137_20015 PF00593 TonB dependent receptor FY137_20020 PF02885 Glycosyl transferase family, helical bundle domain FY137_20020 PF00591 Glycosyl transferase family, a/b domain FY137_20025 PF06772 Bacterial low temperature requirement A protein (LtrA) FY137_20040 PF03428 Replication protein C N-terminal domain FY137_20040 PF11800 Replication protein C C-terminal region FY137_20045 PF02195 ParB-like nuclease domain FY137_20045 PF07506 RepB plasmid partitioning protein FY137_20050 PF13614 AAA domain FY137_20060 PF01042 Endoribonuclease L-PSP FY137_20065 PF01168 Alanine racemase, N-terminal domain FY137_20065 PF14031 Putative serine dehydratase domain FY137_20070 PF07364 Metallopeptidase family M81 FY137_20070 PF07171 MlrC C-terminus FY137_20075 PF05962 HutD FY137_20080 PF01175 Urocanase Rossmann-like domain FY137_20080 PF17392 Urocanase C-terminal domain FY137_20080 PF17391 Urocanase N-terminal domain FY137_20090 PF00221 Aromatic amino acid lyase FY137_20095 PF01979 Amidohydrolase family FY137_20100 PF01979 Amidohydrolase family FY137_20175 PF01434 Peptidase family M41 FY137_20175 PF06480 FtsH Extracellular FY137_20175 PF00004 ATPase family associated with various cellular activities (AAA) FY137_20175 PF17862 AAA+ lid domain FY137_20180 PF00004 ATPase family associated with various cellular activities (AAA) FY137_20180 PF17862 AAA+ lid domain FY137_20180 PF06480 FtsH Extracellular FY137_20180 PF01434 Peptidase family M41 FY137_20195 PF07715 TonB-dependent Receptor Plug Domain FY137_20195 PF00593 TonB dependent receptor FY137_20200 PF00440 Bacterial regulatory proteins, tetR family FY137_20210 PF07687 Peptidase dimerisation domain FY137_20210 PF01546 Peptidase family M20/M25/M40 FY137_20220 PF00294 pfkB family carbohydrate kinase FY137_20230 PF02126 Phosphotriesterase family FY137_20235 PF02653 Branched-chain amino acid transport system / permease component FY137_20240 PF00005 ABC transporter FY137_20250 PF00356 Bacterial regulatory proteins, lacI family FY137_20260 PF02595 Glycerate kinase family FY137_20275 PF00082 Subtilase family FY137_20280 PF04542 Sigma-70 region 2 FY137_20280 PF08281 Sigma-70, region 4 FY137_20300 PF00528 Binding-protein-dependent transport system inner membrane component FY137_20305 PF00528 Binding-protein-dependent transport system inner membrane component FY137_20310 PF13649 Methyltransferase domain FY137_20315 PF00005 ABC transporter FY137_20320 PF01032 FecCD transport family FY137_20325 PF01032 FecCD transport family FY137_20330 PF01497 Periplasmic binding protein FY137_20340 PF07715 TonB-dependent Receptor Plug Domain FY137_20340 PF00593 TonB dependent receptor FY137_20380 PF00005 ABC transporter FY137_20385 PF01032 FecCD transport family FY137_20390 PF01032 FecCD transport family FY137_20395 PF01497 Periplasmic binding protein FY137_20400 PF07715 TonB-dependent Receptor Plug Domain FY137_20410 PF00975 Thioesterase domain FY137_20415 PF00668 Condensation domain FY137_20415 PF13193 AMP-binding enzyme C-terminal domain FY137_20415 PF00550 Phosphopantetheine attachment site FY137_20415 PF07993 Male sterility protein FY137_20415 PF00501 AMP-binding enzyme FY137_20415 PF00501 AMP-binding enzyme FY137_20415 PF07993 Male sterility protein FY137_20415 PF00668 Condensation domain FY137_20415 PF13193 AMP-binding enzyme C-terminal domain FY137_20415 PF00550 Phosphopantetheine attachment site FY137_20420 PF00501 AMP-binding enzyme FY137_20420 PF13193 AMP-binding enzyme C-terminal domain FY137_20420 PF00668 Condensation domain FY137_20420 PF00550 Phosphopantetheine attachment site FY137_20425 PF00550 Phosphopantetheine attachment site FY137_20425 PF00668 Condensation domain FY137_20425 PF13193 AMP-binding enzyme C-terminal domain FY137_20425 PF00501 AMP-binding enzyme FY137_20425 PF00668 Condensation domain FY137_20425 PF13193 AMP-binding enzyme C-terminal domain FY137_20425 PF00501 AMP-binding enzyme FY137_20425 PF00550 Phosphopantetheine attachment site FY137_20430 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_20430 PF00698 Acyl transferase domain FY137_20430 PF00668 Condensation domain FY137_20430 PF16197 Ketoacyl-synthetase C-terminal extension FY137_20430 PF00550 Phosphopantetheine attachment site FY137_20430 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_20450 PF00501 AMP-binding enzyme FY137_20450 PF00550 Phosphopantetheine attachment site FY137_20450 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_20450 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_20450 PF16197 Ketoacyl-synthetase C-terminal extension FY137_20450 PF00668 Condensation domain FY137_20450 PF13193 AMP-binding enzyme C-terminal domain FY137_20450 PF00202 Aminotransferase class-III FY137_20455 PF13649 Methyltransferase domain FY137_20460 PF00501 AMP-binding enzyme FY137_20460 PF13193 AMP-binding enzyme C-terminal domain FY137_20460 PF00668 Condensation domain FY137_20460 PF00550 Phosphopantetheine attachment site FY137_20465 PF00501 AMP-binding enzyme FY137_20470 PF00698 Acyl transferase domain FY137_20470 PF16197 Ketoacyl-synthetase C-terminal extension FY137_20470 PF00668 Condensation domain FY137_20470 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_20470 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_20470 PF00550 Phosphopantetheine attachment site FY137_20480 PF00550 Phosphopantetheine attachment site FY137_20480 PF00668 Condensation domain FY137_20480 PF00501 AMP-binding enzyme FY137_20480 PF00975 Thioesterase domain FY137_20480 PF13193 AMP-binding enzyme C-terminal domain FY137_20485 PF01554 MatE FY137_20495 PF02261 Aspartate decarboxylase FY137_20500 PF02082 Transcriptional regulator FY137_20515 PF00356 Bacterial regulatory proteins, lacI family FY137_20525 PF02653 Branched-chain amino acid transport system / permease component FY137_20530 PF00005 ABC transporter FY137_20540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_20540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_20545 PF01418 Helix-turn-helix domain, rpiR family FY137_20545 PF01380 SIS domain FY137_20550 PF01261 Xylose isomerase-like TIM barrel FY137_20555 PF00440 Bacterial regulatory proteins, tetR family FY137_20585 PF01047 MarR family FY137_20590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_20590 PF03466 LysR substrate binding domain FY137_20595 PF04303 PrpF protein FY137_20605 PF00005 ABC transporter FY137_20610 PF00528 Binding-protein-dependent transport system inner membrane component FY137_20630 PF00672 HAMP domain FY137_20630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_20635 PF03358 NADPH-dependent FMN reductase FY137_20640 PF00296 Luciferase-like monooxygenase FY137_20655 PF03275 UDP-galactopyranose mutase FY137_20665 PF00535 Glycosyl transferase family 2 FY137_20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_20680 PF03466 LysR substrate binding domain FY137_20685 PF07690 Major Facilitator Superfamily FY137_20695 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY137_20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_20700 PF03466 LysR substrate binding domain FY137_20705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_20720 PF07969 Amidohydrolase family FY137_20745 PF00440 Bacterial regulatory proteins, tetR family FY137_20750 PF01145 SPFH domain / Band 7 family FY137_20750 PF15975 Flotillin FY137_20760 PF04012 PspA/IM30 family FY137_20770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_20770 PF03466 LysR substrate binding domain FY137_20775 PF07690 Major Facilitator Superfamily FY137_20780 PF01032 FecCD transport family FY137_20795 PF00593 TonB dependent receptor FY137_20795 PF07715 TonB-dependent Receptor Plug Domain FY137_20815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_20815 PF00512 His Kinase A (phospho-acceptor) domain FY137_20815 PF00672 HAMP domain FY137_20820 PF00486 Transcriptional regulatory protein, C terminal FY137_20820 PF00072 Response regulator receiver domain FY137_20825 PF01569 PAP2 superfamily FY137_20870 PF13673 Acetyltransferase (GNAT) domain FY137_20875 PF06968 Biotin and Thiamin Synthesis associated domain FY137_20875 PF04055 Radical SAM superfamily FY137_20880 PF00155 Aminotransferase class I and II FY137_20890 PF00202 Aminotransferase class-III FY137_20895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY137_20895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY137_20910 PF00491 Arginase family FY137_20915 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY137_20920 PF00892 EamA-like transporter family FY137_20925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_20925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_20935 PF00211 Adenylate and Guanylate cyclase catalytic domain FY137_20935 PF00672 HAMP domain FY137_20945 PF11972 HTH DNA binding domain FY137_20945 PF07756 Protein of unknown function (DUF1612) FY137_20950 PF00083 Sugar (and other) transporter FY137_20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_20955 PF00512 His Kinase A (phospho-acceptor) domain FY137_20960 PF00072 Response regulator receiver domain FY137_20960 PF00486 Transcriptional regulatory protein, C terminal FY137_20965 PF08019 Phosphoethanolamine transferase EptA/EptB FY137_20965 PF00884 Sulfatase FY137_20975 PF03466 LysR substrate binding domain FY137_20975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_20980 PF00593 TonB dependent receptor FY137_20980 PF07715 TonB-dependent Receptor Plug Domain FY137_20990 PF01032 FecCD transport family FY137_20995 PF00005 ABC transporter FY137_21010 PF02631 RecX family FY137_21015 PF08450 SMP-30/Gluconolactonase/LRE-like region FY137_21025 PF02653 Branched-chain amino acid transport system / permease component FY137_21030 PF00005 ABC transporter FY137_21035 PF13407 Periplasmic binding protein domain FY137_21040 PF07730 Histidine kinase FY137_21040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_21045 PF00196 Bacterial regulatory proteins, luxR family FY137_21045 PF00072 Response regulator receiver domain FY137_21055 PF07995 Glucose / Sorbosone dehydrogenase FY137_21065 PF04445 Putative SAM-dependent methyltransferase FY137_21070 PF00849 RNA pseudouridylate synthase FY137_21075 PF01205 Uncharacterized protein family UPF0029 FY137_21080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_21085 PF00571 CBS domain FY137_21085 PF00005 ABC transporter FY137_21090 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21100 PF00072 Response regulator receiver domain FY137_21100 PF13426 PAS domain FY137_21100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_21105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_21110 PF02706 Chain length determinant protein FY137_21110 PF13807 G-rich domain on putative tyrosine kinase FY137_21110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY137_21115 PF00483 Nucleotidyl transferase FY137_21120 PF00535 Glycosyl transferase family 2 FY137_21125 PF00535 Glycosyl transferase family 2 FY137_21130 PF00535 Glycosyl transferase family 2 FY137_21140 PF00722 Glycosyl hydrolases family 16 FY137_21145 PF01757 Acyltransferase family FY137_21150 PF01943 Polysaccharide biosynthesis protein FY137_21155 PF00535 Glycosyl transferase family 2 FY137_21160 PF04230 Polysaccharide pyruvyl transferase FY137_21165 PF00535 Glycosyl transferase family 2 FY137_21170 PF11089 Exopolysaccharide production repressor FY137_21185 PF01165 Ribosomal protein S21 FY137_21190 PF01266 FAD dependent oxidoreductase FY137_21205 PF17806 Sarcosine oxidase A3 domain FY137_21205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_21205 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY137_21205 PF01571 Aminomethyltransferase folate-binding domain FY137_21220 PF01575 MaoC like domain FY137_21225 PF00128 Alpha amylase, catalytic domain FY137_21225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY137_21225 PF18390 Glycogen debranching enzyme C-terminal domain FY137_21230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY137_21230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY137_21230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY137_21230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY137_21235 PF00534 Glycosyl transferases group 1 FY137_21235 PF08323 Starch synthase catalytic domain FY137_21240 PF00483 Nucleotidyl transferase FY137_21245 PF00128 Alpha amylase, catalytic domain FY137_21245 PF02806 Alpha amylase, C-terminal all-beta domain FY137_21245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY137_21250 PF00343 Carbohydrate phosphorylase FY137_21260 PF01177 Asp/Glu/Hydantoin racemase FY137_21265 PF01037 Lrp/AsnC ligand binding domain FY137_21275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY137_21275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY137_21285 PF00107 Zinc-binding dehydrogenase FY137_21285 PF08240 Alcohol dehydrogenase GroES-like domain FY137_21295 PF00664 ABC transporter transmembrane region FY137_21295 PF00005 ABC transporter FY137_21300 PF00005 ABC transporter FY137_21300 PF00664 ABC transporter transmembrane region FY137_21305 PF01654 Cytochrome bd terminal oxidase subunit I FY137_21310 PF02322 Cytochrome bd terminal oxidase subunit II FY137_21315 PF08173 Membrane bound YbgT-like protein FY137_21335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY137_21335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY137_21340 PF00890 FAD binding domain FY137_21340 PF02910 Fumarate reductase flavoprotein C-term FY137_21345 PF02445 Quinolinate synthetase A protein FY137_21375 PF02224 Cytidylate kinase FY137_21380 PF00575 S1 RNA binding domain FY137_21410 PF00106 short chain dehydrogenase FY137_21415 PF01321 Creatinase/Prolidase N-terminal domain FY137_21415 PF00557 Metallopeptidase family M24 FY137_21420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_21425 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21430 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_21430 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21435 PF00005 ABC transporter FY137_21435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_21440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_21440 PF00005 ABC transporter FY137_21445 PF01232 Mannitol dehydrogenase Rossmann domain FY137_21445 PF08125 Mannitol dehydrogenase C-terminal domain FY137_21450 PF07729 FCD domain FY137_21450 PF00392 Bacterial regulatory proteins, gntR family FY137_21455 PF13378 Enolase C-terminal domain-like FY137_21455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_21460 PF00296 Luciferase-like monooxygenase FY137_21475 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_21475 PF00005 ABC transporter FY137_21480 PF00005 ABC transporter FY137_21485 PF02653 Branched-chain amino acid transport system / permease component FY137_21490 PF02653 Branched-chain amino acid transport system / permease component FY137_21490 PF11862 Domain of unknown function (DUF3382) FY137_21495 PF00732 GMC oxidoreductase FY137_21495 PF05199 GMC oxidoreductase FY137_21500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY137_21500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY137_21505 PF13193 AMP-binding enzyme C-terminal domain FY137_21505 PF00501 AMP-binding enzyme FY137_21525 PF01011 PQQ enzyme repeat FY137_21530 PF05974 Domain of unknown function (DUF892) FY137_21535 PF02308 MgtC family FY137_21540 PF03275 UDP-galactopyranose mutase FY137_21560 PF01965 DJ-1/PfpI family FY137_21580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY137_21580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY137_21585 PF16363 GDP-mannose 4,6 dehydratase FY137_21590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY137_21590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY137_21590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY137_21600 PF13409 Glutathione S-transferase, N-terminal domain FY137_21605 PF03466 LysR substrate binding domain FY137_21605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_21610 PF00171 Aldehyde dehydrogenase family FY137_21615 PF09084 NMT1/THI5 like FY137_21620 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21625 PF00005 ABC transporter FY137_21630 PF00171 Aldehyde dehydrogenase family FY137_21630 PF01619 Proline dehydrogenase FY137_21630 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY137_21630 PF14850 DNA-binding domain of Proline dehydrogenase FY137_21635 PF01037 Lrp/AsnC ligand binding domain FY137_21640 PF08281 Sigma-70, region 4 FY137_21640 PF04542 Sigma-70 region 2 FY137_21650 PF00072 Response regulator receiver domain FY137_21655 PF13426 PAS domain FY137_21655 PF08447 PAS fold FY137_21655 PF07536 HWE histidine kinase FY137_21660 PF13426 PAS domain FY137_21660 PF13581 Histidine kinase-like ATPase domain FY137_21660 PF07536 HWE histidine kinase FY137_21670 PF16363 GDP-mannose 4,6 dehydratase FY137_21685 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY137_21690 PF16653 Saccharopine dehydrogenase C-terminal domain FY137_21690 PF03435 Saccharopine dehydrogenase NADP binding domain FY137_21695 PF13977 BetI-type transcriptional repressor, C-terminal FY137_21695 PF00440 Bacterial regulatory proteins, tetR family FY137_21705 PF00270 DEAD/DEAH box helicase FY137_21705 PF00271 Helicase conserved C-terminal domain FY137_21710 PF13840 ACT domain FY137_21710 PF01842 ACT domain FY137_21710 PF00696 Amino acid kinase family FY137_21715 PF02896 PEP-utilising enzyme, TIM barrel domain FY137_21715 PF00391 PEP-utilising enzyme, mobile domain FY137_21715 PF01590 GAF domain FY137_21715 PF05524 PEP-utilising enzyme, N-terminal FY137_21720 PF00472 RF-1 domain FY137_21720 PF03462 PCRF domain FY137_21725 PF05175 Methyltransferase small domain FY137_21725 PF17827 PrmC N-terminal domain FY137_21735 PF00004 ATPase family associated with various cellular activities (AAA) FY137_21735 PF07724 AAA domain (Cdc48 subfamily) FY137_21735 PF17871 AAA lid domain FY137_21735 PF10431 C-terminal, D2-small domain, of ClpB protein FY137_21735 PF02861 Clp amino terminal domain, pathogenicity island component FY137_21740 PF01464 Transglycosylase SLT domain FY137_21740 PF01551 Peptidase family M23 FY137_21740 PF10145 Phage-related minor tail protein FY137_21785 PF01554 MatE FY137_21800 PF00091 Tubulin/FtsZ family, GTPase domain FY137_21800 PF12327 FtsZ family, C-terminal domain FY137_21805 PF00109 Beta-ketoacyl synthase, N-terminal domain FY137_21805 PF02801 Beta-ketoacyl synthase, C-terminal domain FY137_21810 PF00440 Bacterial regulatory proteins, tetR family FY137_21815 PF00529 HlyD membrane-fusion protein of T1SS FY137_21815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_21820 PF00873 AcrB/AcrD/AcrF family FY137_21825 PF02798 Glutathione S-transferase, N-terminal domain FY137_21830 PF00106 short chain dehydrogenase FY137_21840 PF05035 2-keto-3-deoxy-galactonokinase FY137_21845 PF00701 Dihydrodipicolinate synthetase family FY137_21850 PF13378 Enolase C-terminal domain-like FY137_21850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_21860 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21865 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21870 PF17912 MalK OB fold domain FY137_21870 PF00005 ABC transporter FY137_21875 PF16363 GDP-mannose 4,6 dehydratase FY137_21880 PF01614 Bacterial transcriptional regulator FY137_21880 PF09339 IclR helix-turn-helix domain FY137_21900 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_21900 PF00528 Binding-protein-dependent transport system inner membrane component FY137_21910 PF06715 Gp5 C-terminal repeat (3 copies) FY137_21910 PF04717 Type VI secretion system, phage-baseplate injector FY137_21960 PF00486 Transcriptional regulatory protein, C terminal FY137_21960 PF00072 Response regulator receiver domain FY137_21965 PF00989 PAS fold FY137_21965 PF11808 Phosphate regulon sensor protein PhoR FY137_21965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_21965 PF00512 His Kinase A (phospho-acceptor) domain FY137_21970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_21975 PF12704 MacB-like periplasmic core domain FY137_21975 PF00005 ABC transporter FY137_21975 PF02687 FtsX-like permease family FY137_21985 PF01638 HxlR-like helix-turn-helix FY137_22000 PF12697 Alpha/beta hydrolase family FY137_22030 PF00465 Iron-containing alcohol dehydrogenase FY137_22035 PF00795 Carbon-nitrogen hydrolase FY137_22040 PF00005 ABC transporter FY137_22040 PF09383 NIL domain FY137_22045 PF00005 ABC transporter FY137_22045 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_22055 PF02653 Branched-chain amino acid transport system / permease component FY137_22060 PF13458 Periplasmic binding protein FY137_22075 PF03466 LysR substrate binding domain FY137_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_22080 PF00005 ABC transporter FY137_22080 PF08402 TOBE domain FY137_22090 PF01266 FAD dependent oxidoreductase FY137_22100 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22105 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22110 PF00732 GMC oxidoreductase FY137_22110 PF05199 GMC oxidoreductase FY137_22115 PF00171 Aldehyde dehydrogenase family FY137_22150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY137_22150 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_22165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_22165 PF00512 His Kinase A (phospho-acceptor) domain FY137_22165 PF01590 GAF domain FY137_22165 PF00360 Phytochrome region FY137_22165 PF08446 PAS fold FY137_22180 PF07729 FCD domain FY137_22180 PF00392 Bacterial regulatory proteins, gntR family FY137_22185 PF13183 4Fe-4S dicluster domain FY137_22185 PF01565 FAD binding domain FY137_22185 PF02913 FAD linked oxidases, C-terminal domain FY137_22195 PF00106 short chain dehydrogenase FY137_22205 PF00205 Thiamine pyrophosphate enzyme, central domain FY137_22205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY137_22205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY137_22210 PF05378 Hydantoinase/oxoprolinase N-terminal region FY137_22210 PF01968 Hydantoinase/oxoprolinase FY137_22220 PF00155 Aminotransferase class I and II FY137_22225 PF01370 NAD dependent epimerase/dehydratase family FY137_22230 PF01266 FAD dependent oxidoreductase FY137_22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_22235 PF03466 LysR substrate binding domain FY137_22240 PF13458 Periplasmic binding protein FY137_22245 PF02653 Branched-chain amino acid transport system / permease component FY137_22250 PF02653 Branched-chain amino acid transport system / permease component FY137_22250 PF11862 Domain of unknown function (DUF3382) FY137_22255 PF00005 ABC transporter FY137_22255 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_22260 PF00005 ABC transporter FY137_22265 PF01012 Electron transfer flavoprotein domain FY137_22270 PF00766 Electron transfer flavoprotein FAD-binding domain FY137_22270 PF01012 Electron transfer flavoprotein domain FY137_22285 PF02734 DAK2 domain FY137_22285 PF02733 Dak1 domain FY137_22290 PF01037 Lrp/AsnC ligand binding domain FY137_22295 PF01053 Cys/Met metabolism PLP-dependent enzyme FY137_22300 PF17200 Single Cache domain 2 FY137_22300 PF07730 Histidine kinase FY137_22305 PF00196 Bacterial regulatory proteins, luxR family FY137_22305 PF00072 Response regulator receiver domain FY137_22310 PF03480 Bacterial extracellular solute-binding protein, family 7 FY137_22315 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY137_22330 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY137_22335 PF00296 Luciferase-like monooxygenase FY137_22345 PF00005 ABC transporter FY137_22345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_22350 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22350 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_22355 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_22365 PF00384 Molybdopterin oxidoreductase FY137_22365 PF01568 Molydopterin dinucleotide binding domain FY137_22370 PF02913 FAD linked oxidases, C-terminal domain FY137_22370 PF01565 FAD binding domain FY137_22375 PF01323 DSBA-like thioredoxin domain FY137_22390 PF00881 Nitroreductase family FY137_22395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_22410 PF03466 LysR substrate binding domain FY137_22425 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22430 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22435 PF17912 MalK OB fold domain FY137_22435 PF00005 ABC transporter FY137_22440 PF01842 ACT domain FY137_22440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_22440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_22445 PF00701 Dihydrodipicolinate synthetase family FY137_22450 PF00480 ROK family FY137_22460 PF08402 TOBE domain FY137_22460 PF00005 ABC transporter FY137_22465 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22475 PF00196 Bacterial regulatory proteins, luxR family FY137_22495 PF08402 TOBE domain FY137_22495 PF00005 ABC transporter FY137_22505 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22510 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22515 PF01177 Asp/Glu/Hydantoin racemase FY137_22525 PF00155 Aminotransferase class I and II FY137_22525 PF00392 Bacterial regulatory proteins, gntR family FY137_22540 PF02567 Phenazine biosynthesis-like protein FY137_22545 PF00293 NUDIX domain FY137_22550 PF05163 DinB family FY137_22555 PF03466 LysR substrate binding domain FY137_22555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_22565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_22565 PF03466 LysR substrate binding domain FY137_22570 PF00857 Isochorismatase family FY137_22575 PF03466 LysR substrate binding domain FY137_22575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_22580 PF00795 Carbon-nitrogen hydrolase FY137_22595 PF08402 TOBE domain FY137_22595 PF00005 ABC transporter FY137_22600 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22605 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22610 PF01266 FAD dependent oxidoreductase FY137_22610 PF04324 BFD-like [2Fe-2S] binding domain FY137_22615 PF04324 BFD-like [2Fe-2S] binding domain FY137_22615 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_22620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_22620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_22630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY137_22635 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY137_22640 PF00510 Cytochrome c oxidase subunit III FY137_22645 PF00510 Cytochrome c oxidase subunit III FY137_22655 PF05544 Proline racemase FY137_22660 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22665 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22670 PF00571 CBS domain FY137_22670 PF00005 ABC transporter FY137_22680 PF01266 FAD dependent oxidoreductase FY137_22685 PF00171 Aldehyde dehydrogenase family FY137_22690 PF00701 Dihydrodipicolinate synthetase family FY137_22700 PF02311 AraC-like ligand binding domain FY137_22700 PF12833 Helix-turn-helix domain FY137_22705 PF01266 FAD dependent oxidoreductase FY137_22715 PF01571 Aminomethyltransferase folate-binding domain FY137_22715 PF17806 Sarcosine oxidase A3 domain FY137_22715 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY137_22715 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_22725 PF00464 Serine hydroxymethyltransferase FY137_22730 PF03313 Serine dehydratase alpha chain FY137_22730 PF03315 Serine dehydratase beta chain FY137_22735 PF00551 Formyl transferase FY137_22740 PF04954 Siderophore-interacting protein FY137_22740 PF08021 Siderophore-interacting FAD-binding domain FY137_22745 PF01032 FecCD transport family FY137_22750 PF01497 Periplasmic binding protein FY137_22755 PF07715 TonB-dependent Receptor Plug Domain FY137_22755 PF00593 TonB dependent receptor FY137_22775 PF00440 Bacterial regulatory proteins, tetR family FY137_22785 PF00107 Zinc-binding dehydrogenase FY137_22785 PF08240 Alcohol dehydrogenase GroES-like domain FY137_22790 PF12833 Helix-turn-helix domain FY137_22795 PF13407 Periplasmic binding protein domain FY137_22800 PF00005 ABC transporter FY137_22805 PF02653 Branched-chain amino acid transport system / permease component FY137_22810 PF00106 short chain dehydrogenase FY137_22815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_22815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_22830 PF02563 Polysaccharide biosynthesis/export protein FY137_22845 PF14331 ImcF-related N-terminal domain FY137_22845 PF06744 Type VI secretion protein IcmF C-terminal FY137_22845 PF06761 Intracellular multiplication and human macrophage-killing FY137_22850 PF00691 OmpA family FY137_22855 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY137_22870 PF05947 Type VI secretion system, TssF FY137_22890 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY137_22895 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY137_22905 PF17871 AAA lid domain FY137_22905 PF10431 C-terminal, D2-small domain, of ClpB protein FY137_22905 PF07724 AAA domain (Cdc48 subfamily) FY137_22905 PF00004 ATPase family associated with various cellular activities (AAA) FY137_22925 PF04717 Type VI secretion system, phage-baseplate injector FY137_22925 PF06715 Gp5 C-terminal repeat (3 copies) FY137_22945 PF13188 PAS domain FY137_22945 PF03707 Bacterial signalling protein N terminal repeat FY137_22945 PF00990 Diguanylate cyclase, GGDEF domain FY137_22945 PF00563 EAL domain FY137_22950 PF00459 Inositol monophosphatase family FY137_22965 PF02690 Na+/Pi-cotransporter FY137_22970 PF00356 Bacterial regulatory proteins, lacI family FY137_22980 PF00528 Binding-protein-dependent transport system inner membrane component FY137_22985 PF08402 TOBE domain FY137_22985 PF00005 ABC transporter FY137_23005 PF00459 Inositol monophosphatase family FY137_23020 PF00005 ABC transporter FY137_23020 PF17912 MalK OB fold domain FY137_23020 PF03459 TOBE domain FY137_23025 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23030 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23035 PF13416 Bacterial extracellular solute-binding protein FY137_23040 PF01261 Xylose isomerase-like TIM barrel FY137_23045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_23045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_23050 PF00356 Bacterial regulatory proteins, lacI family FY137_23065 PF03466 LysR substrate binding domain FY137_23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_23070 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY137_23075 PF01042 Endoribonuclease L-PSP FY137_23080 PF03737 Aldolase/RraA FY137_23085 PF00083 Sugar (and other) transporter FY137_23085 PF07690 Major Facilitator Superfamily FY137_23090 PF07687 Peptidase dimerisation domain FY137_23090 PF01546 Peptidase family M20/M25/M40 FY137_23095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_23095 PF03466 LysR substrate binding domain FY137_23105 PF13407 Periplasmic binding protein domain FY137_23110 PF00005 ABC transporter FY137_23115 PF02653 Branched-chain amino acid transport system / permease component FY137_23120 PF02653 Branched-chain amino acid transport system / permease component FY137_23125 PF00356 Bacterial regulatory proteins, lacI family FY137_23135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_23135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_23155 PF00034 Cytochrome c FY137_23170 PF00394 Multicopper oxidase FY137_23170 PF07732 Multicopper oxidase FY137_23190 PF00092 von Willebrand factor type A domain FY137_23195 PF07728 AAA domain (dynein-related subfamily) FY137_23195 PF08406 CbbQ/NirQ/NorQ C-terminal FY137_23200 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY137_23205 PF00034 Cytochrome c FY137_23215 PF00510 Cytochrome c oxidase subunit III FY137_23225 PF02441 Flavoprotein FY137_23230 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY137_23235 PF04343 Protein of unknown function, DUF488 FY137_23245 PF01136 Peptidase family U32 FY137_23270 PF00005 ABC transporter FY137_23280 PF06796 Periplasmic nitrate reductase protein NapE FY137_23295 PF01568 Molydopterin dinucleotide binding domain FY137_23295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY137_23295 PF00384 Molybdopterin oxidoreductase FY137_23300 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY137_23305 PF03264 NapC/NirT cytochrome c family, N-terminal region FY137_23315 PF01648 4'-phosphopantetheinyl transferase superfamily FY137_23315 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY137_23325 PF00550 Phosphopantetheine attachment site FY137_23325 PF00857 Isochorismatase family FY137_23330 PF13193 AMP-binding enzyme C-terminal domain FY137_23330 PF00501 AMP-binding enzyme FY137_23335 PF00425 chorismate binding enzyme FY137_23340 PF00668 Condensation domain FY137_23340 PF00501 AMP-binding enzyme FY137_23340 PF13193 AMP-binding enzyme C-terminal domain FY137_23340 PF00550 Phosphopantetheine attachment site FY137_23345 PF00501 AMP-binding enzyme FY137_23345 PF00975 Thioesterase domain FY137_23345 PF00668 Condensation domain FY137_23345 PF00550 Phosphopantetheine attachment site FY137_23350 PF00550 Phosphopantetheine attachment site FY137_23350 PF00668 Condensation domain FY137_23350 PF13193 AMP-binding enzyme C-terminal domain FY137_23350 PF00501 AMP-binding enzyme FY137_23350 PF00975 Thioesterase domain FY137_23360 PF08021 Siderophore-interacting FAD-binding domain FY137_23360 PF04954 Siderophore-interacting protein FY137_23370 PF01032 FecCD transport family FY137_23375 PF01032 FecCD transport family FY137_23380 PF00005 ABC transporter FY137_23385 PF00296 Luciferase-like monooxygenase FY137_23395 PF07715 TonB-dependent Receptor Plug Domain FY137_23400 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_23400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_23400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_23405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_23405 PF03466 LysR substrate binding domain FY137_23415 PF00356 Bacterial regulatory proteins, lacI family FY137_23425 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23435 PF00005 ABC transporter FY137_23435 PF08402 TOBE domain FY137_23445 PF13382 Adenine deaminase C-terminal domain FY137_23445 PF01979 Amidohydrolase family FY137_23450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_23450 PF03466 LysR substrate binding domain FY137_23455 PF07690 Major Facilitator Superfamily FY137_23460 PF01546 Peptidase family M20/M25/M40 FY137_23460 PF07687 Peptidase dimerisation domain FY137_23470 PF01244 Membrane dipeptidase (Peptidase family M19) FY137_23475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_23480 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23485 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23485 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_23490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_23490 PF00005 ABC transporter FY137_23495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_23495 PF00005 ABC transporter FY137_23500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_23500 PF03466 LysR substrate binding domain FY137_23505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_23510 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23515 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23515 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_23520 PF01425 Amidase FY137_23525 PF01965 DJ-1/PfpI family FY137_23535 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_23535 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23540 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_23550 PF01546 Peptidase family M20/M25/M40 FY137_23550 PF07687 Peptidase dimerisation domain FY137_23555 PF00005 ABC transporter FY137_23555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_23560 PF04198 Putative sugar-binding domain FY137_23570 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23575 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23580 PF08402 TOBE domain FY137_23580 PF00005 ABC transporter FY137_23590 PF08125 Mannitol dehydrogenase C-terminal domain FY137_23590 PF01232 Mannitol dehydrogenase Rossmann domain FY137_23595 PF13419 Haloacid dehalogenase-like hydrolase FY137_23600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_23600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_23615 PF10576 Iron-sulfur binding domain of endonuclease III FY137_23615 PF00633 Helix-hairpin-helix motif FY137_23615 PF00730 HhH-GPD superfamily base excision DNA repair protein FY137_23625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY137_23625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY137_23630 PF13936 Helix-turn-helix domain FY137_23630 PF04198 Putative sugar-binding domain FY137_23635 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY137_23640 PF09339 IclR helix-turn-helix domain FY137_23640 PF01614 Bacterial transcriptional regulator FY137_23655 PF00950 ABC 3 transport family FY137_23660 PF00950 ABC 3 transport family FY137_23665 PF00005 ABC transporter FY137_23670 PF01297 Zinc-uptake complex component A periplasmic FY137_23680 PF01734 Patatin-like phospholipase FY137_23685 PF01336 OB-fold nucleic acid binding domain FY137_23685 PF00152 tRNA synthetases class II (D, K and N) FY137_23690 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY137_23695 PF02080 TrkA-C domain FY137_23695 PF03600 Citrate transporter FY137_23705 PF03471 Transporter associated domain FY137_23705 PF03741 Integral membrane protein TerC family FY137_23710 PF00440 Bacterial regulatory proteins, tetR family FY137_23715 PF13533 Biotin-lipoyl like FY137_23720 PF07690 Major Facilitator Superfamily FY137_23725 PF00356 Bacterial regulatory proteins, lacI family FY137_23725 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY137_23730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_23730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_23735 PF01261 Xylose isomerase-like TIM barrel FY137_23740 PF00232 Glycosyl hydrolase family 1 FY137_23745 PF00881 Nitroreductase family FY137_23750 PF00005 ABC transporter FY137_23750 PF09383 NIL domain FY137_23755 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23760 PF03180 NLPA lipoprotein FY137_23765 PF00563 EAL domain FY137_23765 PF00990 Diguanylate cyclase, GGDEF domain FY137_23765 PF03707 Bacterial signalling protein N terminal repeat FY137_23765 PF13188 PAS domain FY137_23770 PF00581 Rhodanese-like domain FY137_23770 PF17773 UPF0176 acylphosphatase like domain FY137_23780 PF01928 CYTH domain FY137_23785 PF01081 KDPG and KHG aldolase FY137_23805 PF03824 High-affinity nickel-transport protein FY137_23825 PF13505 Outer membrane protein beta-barrel domain FY137_23845 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY137_23845 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY137_23850 PF02633 Creatinine amidohydrolase FY137_23855 PF01047 MarR family FY137_23860 PF00356 Bacterial regulatory proteins, lacI family FY137_23865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_23865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_23870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_23870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_23875 PF04962 KduI/IolB family FY137_23880 PF01261 Xylose isomerase-like TIM barrel FY137_23885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY137_23885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY137_23885 PF00205 Thiamine pyrophosphate enzyme, central domain FY137_23890 PF00294 pfkB family carbohydrate kinase FY137_23900 PF00005 ABC transporter FY137_23905 PF00005 ABC transporter FY137_23905 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_23910 PF02653 Branched-chain amino acid transport system / permease component FY137_23920 PF13458 Periplasmic binding protein FY137_23935 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23935 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_23940 PF00528 Binding-protein-dependent transport system inner membrane component FY137_23945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_23950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_23950 PF00005 ABC transporter FY137_23965 PF01261 Xylose isomerase-like TIM barrel FY137_23965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_23975 PF01220 Dehydroquinase class II FY137_23980 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY137_23980 PF08501 Shikimate dehydrogenase substrate binding domain FY137_23985 PF00005 ABC transporter FY137_23990 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_23995 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_24000 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24005 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24010 PF00206 Lyase FY137_24010 PF10397 Adenylosuccinate lyase C-terminus FY137_24015 PF00775 Dioxygenase FY137_24020 PF00775 Dioxygenase FY137_24020 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY137_24025 PF02627 Carboxymuconolactone decarboxylase family FY137_24035 PF03466 LysR substrate binding domain FY137_24035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_24040 PF01494 FAD binding domain FY137_24050 PF09339 IclR helix-turn-helix domain FY137_24050 PF01614 Bacterial transcriptional regulator FY137_24055 PF01144 Coenzyme A transferase FY137_24060 PF01144 Coenzyme A transferase FY137_24065 PF02803 Thiolase, C-terminal domain FY137_24065 PF00108 Thiolase, N-terminal domain FY137_24070 PF00356 Bacterial regulatory proteins, lacI family FY137_24075 PF13407 Periplasmic binding protein domain FY137_24080 PF13407 Periplasmic binding protein domain FY137_24085 PF01261 Xylose isomerase-like TIM barrel FY137_24090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_24090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_24100 PF00356 Bacterial regulatory proteins, lacI family FY137_24105 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24110 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24115 PF17912 MalK OB fold domain FY137_24115 PF00005 ABC transporter FY137_24125 PF07470 Glycosyl Hydrolase Family 88 FY137_24145 PF07690 Major Facilitator Superfamily FY137_24150 PF07715 TonB-dependent Receptor Plug Domain FY137_24150 PF00593 TonB dependent receptor FY137_24155 PF04773 FecR protein FY137_24155 PF16220 Domain of unknown function (DUF4880) FY137_24165 PF00480 ROK family FY137_24165 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY137_24175 PF17912 MalK OB fold domain FY137_24175 PF00005 ABC transporter FY137_24180 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24185 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24190 PF03009 Glycerophosphoryl diester phosphodiesterase family FY137_24195 PF00459 Inositol monophosphatase family FY137_24200 PF00106 short chain dehydrogenase FY137_24205 PF12833 Helix-turn-helix domain FY137_24205 PF12852 Cupin FY137_24215 PF11953 Domain of unknown function (DUF3470) FY137_24215 PF00037 4Fe-4S binding domain FY137_24220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY137_24220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY137_24260 PF17841 BID domain of Bartonella effector protein (Bep) FY137_24260 PF03389 MobA/MobL family FY137_24260 PF01443 Viral (Superfamily 1) RNA helicase FY137_24275 PF02534 Type IV secretory system Conjugative DNA transfer FY137_24280 PF01758 Sodium Bile acid symporter family FY137_24285 PF00248 Aldo/keto reductase family FY137_24290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_24290 PF03466 LysR substrate binding domain FY137_24310 PF00664 ABC transporter transmembrane region FY137_24310 PF00005 ABC transporter FY137_24315 PF01050 Mannose-6-phosphate isomerase FY137_24315 PF00483 Nucleotidyl transferase FY137_24320 PF00534 Glycosyl transferases group 1 FY137_24325 PF16363 GDP-mannose 4,6 dehydratase FY137_24330 PF16363 GDP-mannose 4,6 dehydratase FY137_24350 PF05717 IS66 Orf2 like protein FY137_24375 PF08241 Methyltransferase domain FY137_24380 PF13439 Glycosyltransferase Family 4 FY137_24380 PF00534 Glycosyl transferases group 1 FY137_24400 PF01032 FecCD transport family FY137_24405 PF01032 FecCD transport family FY137_24410 PF00005 ABC transporter FY137_24415 PF07715 TonB-dependent Receptor Plug Domain FY137_24420 PF13361 UvrD-like helicase C-terminal domain FY137_24420 PF00580 UvrD/REP helicase N-terminal domain FY137_24425 PF00005 ABC transporter FY137_24425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_24430 PF00005 ABC transporter FY137_24430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_24435 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_24435 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24440 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24445 PF00392 Bacterial regulatory proteins, gntR family FY137_24445 PF07729 FCD domain FY137_24450 PF03786 D-mannonate dehydratase (UxuA) FY137_24455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_24465 PF00563 EAL domain FY137_24465 PF03707 Bacterial signalling protein N terminal repeat FY137_24465 PF13188 PAS domain FY137_24465 PF00990 Diguanylate cyclase, GGDEF domain FY137_24480 PF02735 Ku70/Ku80 beta-barrel domain FY137_24485 PF13298 DNA polymerase Ligase (LigD) FY137_24485 PF01068 ATP dependent DNA ligase domain FY137_24485 PF04679 ATP dependent DNA ligase C terminal region FY137_24490 PF02735 Ku70/Ku80 beta-barrel domain FY137_24495 PF01384 Phosphate transporter family FY137_24500 PF01865 Protein of unknown function DUF47 FY137_24510 PF00873 AcrB/AcrD/AcrF family FY137_24515 PF00529 HlyD membrane-fusion protein of T1SS FY137_24515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY137_24520 PF00072 Response regulator receiver domain FY137_24520 PF00486 Transcriptional regulatory protein, C terminal FY137_24525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_24525 PF00512 His Kinase A (phospho-acceptor) domain FY137_24525 PF00672 HAMP domain FY137_24535 PF03466 LysR substrate binding domain FY137_24535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_24540 PF00141 Peroxidase FY137_24545 PF12833 Helix-turn-helix domain FY137_24550 PF07715 TonB-dependent Receptor Plug Domain FY137_24550 PF00593 TonB dependent receptor FY137_24560 PF01032 FecCD transport family FY137_24565 PF01032 FecCD transport family FY137_24570 PF00005 ABC transporter FY137_24580 PF01381 Helix-turn-helix FY137_24585 PF12833 Helix-turn-helix domain FY137_24585 PF10114 Sensory domain found in PocR FY137_24595 PF02653 Branched-chain amino acid transport system / permease component FY137_24605 PF00005 ABC transporter FY137_24605 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_24610 PF00005 ABC transporter FY137_24615 PF00171 Aldehyde dehydrogenase family FY137_24620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_24620 PF03466 LysR substrate binding domain FY137_24625 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY137_24630 PF12411 Choline sulfatase enzyme C terminal FY137_24630 PF00884 Sulfatase FY137_24635 PF00294 pfkB family carbohydrate kinase FY137_24640 PF08402 TOBE domain FY137_24640 PF00005 ABC transporter FY137_24645 PF14698 Argininosuccinate lyase C-terminal FY137_24645 PF00206 Lyase FY137_24650 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24655 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24660 PF13416 Bacterial extracellular solute-binding protein FY137_24665 PF00480 ROK family FY137_24690 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY137_24690 PF02056 Family 4 glycosyl hydrolase FY137_24695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_24700 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24705 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24705 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_24710 PF00005 ABC transporter FY137_24710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_24715 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY137_24715 PF02056 Family 4 glycosyl hydrolase FY137_24720 PF13533 Biotin-lipoyl like FY137_24725 PF00005 ABC transporter FY137_24745 PF00072 Response regulator receiver domain FY137_24750 PF12327 FtsZ family, C-terminal domain FY137_24750 PF00091 Tubulin/FtsZ family, GTPase domain FY137_24755 PF07729 FCD domain FY137_24755 PF00392 Bacterial regulatory proteins, gntR family FY137_24760 PF00701 Dihydrodipicolinate synthetase family FY137_24765 PF02615 Malate/L-lactate dehydrogenase FY137_24775 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24780 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24785 PF00005 ABC transporter FY137_24790 PF01266 FAD dependent oxidoreductase FY137_24800 PF05544 Proline racemase FY137_24805 PF00356 Bacterial regulatory proteins, lacI family FY137_24815 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_24820 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24825 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24830 PF00005 ABC transporter FY137_24835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY137_24835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY137_24840 PF00990 Diguanylate cyclase, GGDEF domain FY137_24840 PF00563 EAL domain FY137_24840 PF03707 Bacterial signalling protein N terminal repeat FY137_24845 PF02530 Porin subfamily FY137_24850 PF01613 Flavin reductase like domain FY137_24855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_24855 PF03466 LysR substrate binding domain FY137_24865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY137_24865 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY137_24865 PF00037 4Fe-4S binding domain FY137_24870 PF00384 Molybdopterin oxidoreductase FY137_24870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY137_24870 PF00037 4Fe-4S binding domain FY137_24870 PF01568 Molydopterin dinucleotide binding domain FY137_24870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY137_24880 PF07690 Major Facilitator Superfamily FY137_24885 PF00701 Dihydrodipicolinate synthetase family FY137_24890 PF08450 SMP-30/Gluconolactonase/LRE-like region FY137_24900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_24905 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24910 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24910 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_24915 PF00005 ABC transporter FY137_24915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_24920 PF13378 Enolase C-terminal domain-like FY137_24920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_24930 PF07729 FCD domain FY137_24930 PF00392 Bacterial regulatory proteins, gntR family FY137_24935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_24940 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24945 PF00528 Binding-protein-dependent transport system inner membrane component FY137_24945 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_24955 PF00005 ABC transporter FY137_24955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_24960 PF00459 Inositol monophosphatase family FY137_24970 PF17850 CysA C-terminal regulatory domain FY137_24970 PF00005 ABC transporter FY137_24975 PF00528 Binding-protein-dependent transport system inner membrane component FY137_25000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY137_25000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY137_25005 PF03401 Tripartite tricarboxylate transporter family receptor FY137_25010 PF00005 ABC transporter FY137_25010 PF00664 ABC transporter transmembrane region FY137_25015 PF00005 ABC transporter FY137_25025 PF13953 PapC C-terminal domain FY137_25025 PF13954 PapC N-terminal domain FY137_25025 PF00577 Outer membrane usher protein FY137_25040 PF00330 Aconitase family (aconitate hydratase) FY137_25040 PF06434 Aconitate hydratase 2 N-terminus FY137_25040 PF11791 Aconitate B N-terminal domain FY137_25045 PF00132 Bacterial transferase hexapeptide (six repeats) FY137_25055 PF00356 Bacterial regulatory proteins, lacI family FY137_25065 PF00005 ABC transporter FY137_25070 PF02653 Branched-chain amino acid transport system / permease component FY137_25075 PF02653 Branched-chain amino acid transport system / permease component FY137_25080 PF01261 Xylose isomerase-like TIM barrel FY137_25090 PF01261 Xylose isomerase-like TIM barrel FY137_25115 PF04199 Putative cyclase FY137_25120 PF07690 Major Facilitator Superfamily FY137_25125 PF06472 ABC transporter transmembrane region 2 FY137_25125 PF00005 ABC transporter FY137_25140 PF00480 ROK family FY137_25145 PF13407 Periplasmic binding protein domain FY137_25150 PF02653 Branched-chain amino acid transport system / permease component FY137_25155 PF00005 ABC transporter FY137_25160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY137_25160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY137_25165 PF00455 DeoR C terminal sensor domain FY137_25165 PF08220 DeoR-like helix-turn-helix domain FY137_25200 PF00528 Binding-protein-dependent transport system inner membrane component FY137_25205 PF00528 Binding-protein-dependent transport system inner membrane component FY137_25210 PF00005 ABC transporter FY137_25210 PF17912 MalK OB fold domain FY137_25260 PF13614 AAA domain FY137_25260 PF00376 MerR family regulatory protein FY137_25265 PF02195 ParB-like nuclease domain FY137_25265 PF07506 RepB plasmid partitioning protein FY137_25270 PF03428 Replication protein C N-terminal domain FY137_25270 PF11800 Replication protein C C-terminal region FY137_25280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_25280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_25285 PF00005 ABC transporter FY137_25290 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_25295 PF00356 Bacterial regulatory proteins, lacI family FY137_25325 PF00487 Fatty acid desaturase FY137_25335 PF00313 'Cold-shock' DNA-binding domain FY137_25375 PF02810 SEC-C motif FY137_25375 PF07517 SecA DEAD-like domain FY137_25375 PF01043 SecA preprotein cross-linking domain FY137_25375 PF07516 SecA Wing and Scaffold domain FY137_25415 PF13087 AAA domain FY137_25415 PF13091 PLD-like domain FY137_25450 PF00512 His Kinase A (phospho-acceptor) domain FY137_25450 PF00989 PAS fold FY137_25450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_25455 PF00664 ABC transporter transmembrane region FY137_25455 PF00005 ABC transporter FY137_25465 PF01022 Bacterial regulatory protein, arsR family FY137_25495 PF01965 DJ-1/PfpI family FY137_25495 PF12833 Helix-turn-helix domain FY137_25500 PF07690 Major Facilitator Superfamily FY137_25505 PF07690 Major Facilitator Superfamily FY137_25510 PF01047 MarR family FY137_25525 PF07690 Major Facilitator Superfamily FY137_25555 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY137_25560 PF00561 alpha/beta hydrolase fold FY137_25570 PF04752 ChaC-like protein FY137_25575 PF03466 LysR substrate binding domain FY137_25575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_25590 PF00011 Hsp20/alpha crystallin family FY137_25635 PF04956 TrbC/VIRB2 family FY137_25640 PF05101 Type IV secretory pathway, VirB3-like protein FY137_25645 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY137_25650 PF07996 Type IV secretion system proteins FY137_25660 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY137_25670 PF04335 VirB8 protein FY137_25675 PF03524 Conjugal transfer protein FY137_25680 PF03743 Bacterial conjugation TrbI-like protein FY137_25685 PF00437 Type II/IV secretion system protein FY137_25705 PF03230 Antirestriction protein FY137_25785 PF05406 WGR domain FY137_25800 PF02534 Type IV secretory system Conjugative DNA transfer FY137_25815 PF17841 BID domain of Bartonella effector protein (Bep) FY137_25815 PF01443 Viral (Superfamily 1) RNA helicase FY137_25815 PF03389 MobA/MobL family FY137_25825 PF03466 LysR substrate binding domain FY137_25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_25850 PF03472 Autoinducer binding domain FY137_25850 PF00196 Bacterial regulatory proteins, luxR family FY137_25855 PF00765 Autoinducer synthase FY137_25865 PF00072 Response regulator receiver domain FY137_25865 PF00486 Transcriptional regulatory protein, C terminal FY137_25890 PF00795 Carbon-nitrogen hydrolase FY137_25900 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY137_25905 PF00005 ABC transporter FY137_25905 PF08402 TOBE domain FY137_25910 PF00528 Binding-protein-dependent transport system inner membrane component FY137_25915 PF00528 Binding-protein-dependent transport system inner membrane component FY137_25930 PF13635 Domain of unknown function (DUF4143) FY137_25930 PF13173 AAA domain FY137_25935 PF00682 HMGL-like FY137_25935 PF02436 Conserved carboxylase domain FY137_25935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY137_25935 PF00364 Biotin-requiring enzyme FY137_25935 PF00289 Biotin carboxylase, N-terminal domain FY137_25935 PF02785 Biotin carboxylase C-terminal domain FY137_25940 PF14552 Tautomerase enzyme FY137_25945 PF03328 HpcH/HpaI aldolase/citrate lyase family FY137_25950 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY137_25960 PF09339 IclR helix-turn-helix domain FY137_25960 PF01614 Bacterial transcriptional regulator FY137_25970 PF00005 ABC transporter FY137_25975 PF00005 ABC transporter FY137_25985 PF11862 Domain of unknown function (DUF3382) FY137_25985 PF02653 Branched-chain amino acid transport system / permease component FY137_26005 PF00682 HMGL-like FY137_26005 PF08502 LeuA allosteric (dimerisation) domain FY137_26010 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26015 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26020 PF01047 MarR family FY137_26020 PF00480 ROK family FY137_26025 PF00128 Alpha amylase, catalytic domain FY137_26030 PF07687 Peptidase dimerisation domain FY137_26030 PF01546 Peptidase family M20/M25/M40 FY137_26035 PF01261 Xylose isomerase-like TIM barrel FY137_26040 PF00005 ABC transporter FY137_26040 PF17912 MalK OB fold domain FY137_26050 PF00480 ROK family FY137_26055 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26060 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26065 PF01547 Bacterial extracellular solute-binding protein FY137_26070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY137_26070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY137_26085 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY137_26100 PF00005 ABC transporter FY137_26105 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26110 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26115 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY137_26120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_26120 PF00005 ABC transporter FY137_26125 PF00005 ABC transporter FY137_26125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_26130 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_26130 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26135 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_26145 PF03737 Aldolase/RraA FY137_26150 PF03466 LysR substrate binding domain FY137_26150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_26155 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY137_26160 PF07687 Peptidase dimerisation domain FY137_26160 PF01546 Peptidase family M20/M25/M40 FY137_26165 PF01156 Inosine-uridine preferring nucleoside hydrolase FY137_26180 PF00857 Isochorismatase family FY137_26195 PF02678 Pirin FY137_26195 PF17954 Quercetinase C-terminal cupin domain FY137_26200 PF03358 NADPH-dependent FMN reductase FY137_26205 PF00561 alpha/beta hydrolase fold FY137_26225 PF13533 Biotin-lipoyl like FY137_26230 PF03466 LysR substrate binding domain FY137_26230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_26235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY137_26240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_26240 PF03466 LysR substrate binding domain FY137_26255 PF00857 Isochorismatase family FY137_26260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_26260 PF03466 LysR substrate binding domain FY137_26270 PF03551 Transcriptional regulator PadR-like family FY137_26330 PF02653 Branched-chain amino acid transport system / permease component FY137_26335 PF00005 ABC transporter FY137_26340 PF00005 ABC transporter FY137_26340 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_26350 PF12833 Helix-turn-helix domain FY137_26350 PF14525 AraC-binding-like domain FY137_26410 PF00392 Bacterial regulatory proteins, gntR family FY137_26410 PF07729 FCD domain FY137_26415 PF00775 Dioxygenase FY137_26415 PF04444 Catechol dioxygenase N terminus FY137_26420 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY137_26425 PF03328 HpcH/HpaI aldolase/citrate lyase family FY137_26435 PF01571 Aminomethyltransferase folate-binding domain FY137_26440 PF02219 Methylenetetrahydrofolate reductase FY137_26445 PF00551 Formyl transferase FY137_26455 PF08240 Alcohol dehydrogenase GroES-like domain FY137_26455 PF00107 Zinc-binding dehydrogenase FY137_26465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY137_26465 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY137_26465 PF02770 Acyl-CoA dehydrogenase, middle domain FY137_26465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY137_26470 PF00378 Enoyl-CoA hydratase/isomerase FY137_26475 PF00501 AMP-binding enzyme FY137_26475 PF13193 AMP-binding enzyme C-terminal domain FY137_26480 PF00171 Aldehyde dehydrogenase family FY137_26485 PF07690 Major Facilitator Superfamily FY137_26500 PF17158 Membrane-associated sensor, integral membrane domain FY137_26500 PF00990 Diguanylate cyclase, GGDEF domain FY137_26520 PF12802 MarR family FY137_26530 PF13458 Periplasmic binding protein FY137_26535 PF02653 Branched-chain amino acid transport system / permease component FY137_26545 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_26545 PF00005 ABC transporter FY137_26550 PF00005 ABC transporter FY137_26560 PF00171 Aldehyde dehydrogenase family FY137_26565 PF01546 Peptidase family M20/M25/M40 FY137_26565 PF07687 Peptidase dimerisation domain FY137_26570 PF00202 Aminotransferase class-III FY137_26575 PF00171 Aldehyde dehydrogenase family FY137_26580 PF08450 SMP-30/Gluconolactonase/LRE-like region FY137_26585 PF01261 Xylose isomerase-like TIM barrel FY137_26590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY137_26590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY137_26610 PF01979 Amidohydrolase family FY137_26615 PF00480 ROK family FY137_26615 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY137_26620 PF02653 Branched-chain amino acid transport system / permease component FY137_26625 PF13407 Periplasmic binding protein domain FY137_26630 PF00005 ABC transporter FY137_26650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_26650 PF03466 LysR substrate binding domain FY137_26655 PF07690 Major Facilitator Superfamily FY137_26665 PF00135 Carboxylesterase family FY137_26675 PF00135 Carboxylesterase family FY137_26685 PF00005 ABC transporter FY137_26690 PF02653 Branched-chain amino acid transport system / permease component FY137_26695 PF00135 Carboxylesterase family FY137_26705 PF04303 PrpF protein FY137_26710 PF03737 Aldolase/RraA FY137_26715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY137_26720 PF02585 GlcNAc-PI de-N-acetylase FY137_26735 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY137_26735 PF00005 ABC transporter FY137_26740 PF00005 ABC transporter FY137_26745 PF13458 Periplasmic binding protein FY137_26755 PF03466 LysR substrate binding domain FY137_26755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_26760 PF01614 Bacterial transcriptional regulator FY137_26760 PF09339 IclR helix-turn-helix domain FY137_26770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY137_26770 PF13378 Enolase C-terminal domain-like FY137_26780 PF08402 TOBE domain FY137_26780 PF00005 ABC transporter FY137_26785 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26790 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26800 PF07690 Major Facilitator Superfamily FY137_26835 PF03928 Haem-degrading FY137_26855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_26860 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26865 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26865 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_26870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_26870 PF00005 ABC transporter FY137_26880 PF00296 Luciferase-like monooxygenase FY137_26890 PF00528 Binding-protein-dependent transport system inner membrane component FY137_26895 PF00005 ABC transporter FY137_26900 PF05199 GMC oxidoreductase FY137_26900 PF00732 GMC oxidoreductase FY137_26905 PF00171 Aldehyde dehydrogenase family FY137_26920 PF07729 FCD domain FY137_26920 PF00392 Bacterial regulatory proteins, gntR family FY137_26925 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_26925 PF04324 BFD-like [2Fe-2S] binding domain FY137_26935 PF01266 FAD dependent oxidoreductase FY137_26945 PF01958 Domain of unknown function DUF108 FY137_26945 PF03447 Homoserine dehydrogenase, NAD binding domain FY137_26950 PF01042 Endoribonuclease L-PSP FY137_26955 PF01548 Transposase FY137_26955 PF02371 Transposase IS116/IS110/IS902 family FY137_26995 PF00857 Isochorismatase family FY137_27005 PF00440 Bacterial regulatory proteins, tetR family FY137_27010 PF00005 ABC transporter FY137_27015 PF01032 FecCD transport family FY137_27020 PF01032 FecCD transport family FY137_27030 PF00394 Multicopper oxidase FY137_27030 PF07731 Multicopper oxidase FY137_27030 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY137_27030 PF07732 Multicopper oxidase FY137_27035 PF02885 Glycosyl transferase family, helical bundle domain FY137_27035 PF00591 Glycosyl transferase family, a/b domain FY137_27040 PF07715 TonB-dependent Receptor Plug Domain FY137_27040 PF00593 TonB dependent receptor FY137_27075 PF03551 Transcriptional regulator PadR-like family FY137_27110 PF00394 Multicopper oxidase FY137_27110 PF07732 Multicopper oxidase FY137_27110 PF07731 Multicopper oxidase FY137_27130 PF01209 ubiE/COQ5 methyltransferase family FY137_27145 PF04079 Segregation and condensation complex subunit ScpB FY137_27155 PF00589 Phage integrase family FY137_27165 PF13614 AAA domain FY137_27170 PF02195 ParB-like nuclease domain FY137_27170 PF07506 RepB plasmid partitioning protein FY137_27175 PF11800 Replication protein C C-terminal region FY137_27175 PF03428 Replication protein C N-terminal domain FY137_27180 PF00239 Resolvase, N terminal domain FY137_27185 PF11972 HTH DNA binding domain FY137_27185 PF07756 Protein of unknown function (DUF1612) FY137_27205 PF00239 Resolvase, N terminal domain FY137_27205 PF02796 Helix-turn-helix domain of resolvase FY137_27210 PF07690 Major Facilitator Superfamily FY137_27220 PF08808 RES domain FY137_27255 PF02899 Phage integrase, N-terminal SAM-like domain FY137_27255 PF00589 Phage integrase family FY137_27260 PF00293 NUDIX domain FY137_27275 PF03543 Yersinia/Haemophilus virulence surface antigen FY137_27275 PF05860 haemagglutination activity domain FY137_27275 PF02661 Fic/DOC family FY137_27275 PF13332 Hemagglutinin repeat FY137_27275 PF13018 Extended Signal Peptide of Type V secretion system FY137_27300 PF17762 HTH domain found in ParB protein FY137_27300 PF02195 ParB-like nuclease domain FY137_27325 PF03831 PhnA domain FY137_27325 PF08274 PhnA Zinc-Ribbon FY137_27345 PF01810 LysE type translocator FY137_27360 PF05284 Protein of unknown function (DUF736) FY137_27365 PF00216 Bacterial DNA-binding protein FY137_27385 PF02534 Type IV secretory system Conjugative DNA transfer FY137_27390 PF06412 Conjugal transfer protein TraD FY137_27395 PF07820 TraC-like protein FY137_27400 PF03389 MobA/MobL family FY137_27400 PF17841 BID domain of Bartonella effector protein (Bep) FY137_27400 PF01443 Viral (Superfamily 1) RNA helicase FY137_27405 PF10502 Signal peptidase, peptidase S26 FY137_27410 PF00795 Carbon-nitrogen hydrolase FY137_27415 PF06871 TraH_2 FY137_27420 PF09228 Prokaryotic Transcriptional repressor TraM FY137_27425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY137_27425 PF08447 PAS fold FY137_27425 PF13426 PAS domain FY137_27435 PF03472 Autoinducer binding domain FY137_27435 PF00196 Bacterial regulatory proteins, luxR family FY137_27440 PF00128 Alpha amylase, catalytic domain FY137_27445 PF02690 Na+/Pi-cotransporter FY137_27455 PF00455 DeoR C terminal sensor domain FY137_27455 PF08220 DeoR-like helix-turn-helix domain FY137_27460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_27465 PF00005 ABC transporter FY137_27465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_27470 PF00005 ABC transporter FY137_27470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_27475 PF00528 Binding-protein-dependent transport system inner membrane component FY137_27480 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_27480 PF00528 Binding-protein-dependent transport system inner membrane component FY137_27485 PF03009 Glycerophosphoryl diester phosphodiesterase family FY137_27490 PF00459 Inositol monophosphatase family FY137_27515 PF00067 Cytochrome P450 FY137_27520 PF00067 Cytochrome P450 FY137_27535 PF06903 VirK protein FY137_27570 PF00512 His Kinase A (phospho-acceptor) domain FY137_27570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY137_27575 PF01464 Transglycosylase SLT domain FY137_27580 PF04956 TrbC/VIRB2 family FY137_27585 PF05101 Type IV secretory pathway, VirB3-like protein FY137_27590 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY137_27600 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY137_27605 PF17413 Outer membrane lipoprotein virB7 FY137_27610 PF04335 VirB8 protein FY137_27615 PF03524 Conjugal transfer protein FY137_27620 PF03743 Bacterial conjugation TrbI-like protein FY137_27625 PF00437 Type II/IV secretion system protein FY137_27630 PF00072 Response regulator receiver domain FY137_27630 PF00486 Transcriptional regulatory protein, C terminal FY137_27635 PF07181 VirC2 protein FY137_27640 PF07015 VirC1 protein FY137_27645 PF07328 T-DNA border endonuclease VirD1 FY137_27650 PF03432 Relaxase/Mobilisation nuclease domain FY137_27660 PF02534 Type IV secretory system Conjugative DNA transfer FY137_27680 PF12189 Single-strand DNA-binding protein FY137_27685 PF07229 VirE2 FY137_27705 PF05717 IS66 Orf2 like protein FY137_27710 PF00196 Bacterial regulatory proteins, luxR family FY137_27710 PF03472 Autoinducer binding domain FY137_27725 PF00459 Inositol monophosphatase family FY137_27760 PF02027 RolB/RolC glucosidase family FY137_27765 PF01425 Amidase FY137_27770 PF02027 RolB/RolC glucosidase family FY137_27770 PF01593 Flavin containing amine oxidoreductase FY137_27780 PF02027 RolB/RolC glucosidase family FY137_27785 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY137_27795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY137_27795 PF00005 ABC transporter FY137_27800 PF12911 N-terminal TM domain of oligopeptide transport permease C FY137_27800 PF00528 Binding-protein-dependent transport system inner membrane component FY137_27805 PF00528 Binding-protein-dependent transport system inner membrane component FY137_27810 PF01266 FAD dependent oxidoreductase FY137_27815 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY137_27815 PF17806 Sarcosine oxidase A3 domain FY137_27825 PF01266 FAD dependent oxidoreductase FY137_27830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_27830 PF03466 LysR substrate binding domain FY137_27835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY137_27840 PF05378 Hydantoinase/oxoprolinase N-terminal region FY137_27840 PF01968 Hydantoinase/oxoprolinase FY137_27850 PF00710 Asparaginase, N-terminal FY137_27850 PF17763 Glutaminase/Asparaginase C-terminal domain FY137_27855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY137_27855 PF03466 LysR substrate binding domain FY137_27865 PF00528 Binding-protein-dependent transport system inner membrane component FY137_27875 PF00005 ABC transporter FY137_27875 PF08402 TOBE domain FY137_27885 PF03743 Bacterial conjugation TrbI-like protein FY137_27895 PF03524 Conjugal transfer protein FY137_27900 PF04335 VirB8 protein FY137_27905 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY137_27910 PF10907 Protein of unknown function (DUF2749) FY137_27920 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY137_27925 PF05101 Type IV secretory pathway, VirB3-like protein FY137_27930 PF04956 TrbC/VIRB2 family FY137_27935 PF00437 Type II/IV secretion system protein FY137_27940 PF00765 Autoinducer synthase