locus-tag class description FY138_00005 PF00308 Bacterial dnaA protein FY138_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY138_00005 PF11638 DnaA N-terminal domain FY138_00010 PF06969 HemN C-terminal domain FY138_00010 PF04055 Radical SAM superfamily FY138_00015 PF01725 Ham1 family FY138_00020 PF01138 3' exoribonuclease family, domain 1 FY138_00020 PF03725 3' exoribonuclease family, domain 2 FY138_00025 PF01628 HrcA protein C terminal domain FY138_00030 PF01025 GrpE FY138_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY138_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY138_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY138_00045 PF04552 Sigma-54, DNA binding domain FY138_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY138_00045 PF04963 Sigma-54 factor, core binding domain FY138_00050 PF00005 ABC transporter FY138_00055 PF03968 OstA-like protein FY138_00065 PF01343 Peptidase family S49 FY138_00070 PF00216 Bacterial DNA-binding protein FY138_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY138_00080 PF17785 PUA-like domain FY138_00085 PF00588 SpoU rRNA Methylase family FY138_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY138_00090 PF01252 Signal peptidase (SPase) II FY138_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY138_00095 PF01627 Hpt domain FY138_00095 PF00072 Response regulator receiver domain FY138_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_00095 PF00512 His Kinase A (phospho-acceptor) domain FY138_00095 PF00672 HAMP domain FY138_00105 PF01624 MutS domain I FY138_00105 PF05188 MutS domain II FY138_00105 PF05192 MutS domain III FY138_00105 PF05190 MutS family domain IV FY138_00105 PF00488 MutS domain V FY138_00110 PF01842 ACT domain FY138_00110 PF08335 GlnD PII-uridylyltransferase FY138_00110 PF01966 HD domain FY138_00110 PF01909 Nucleotidyltransferase domain FY138_00115 PF03023 Lipid II flippase MurJ FY138_00125 PF00579 tRNA synthetases class I (W and Y) FY138_00135 PF01106 NifU-like domain FY138_00140 PF00814 Glycoprotease family FY138_00150 PF01475 Ferric uptake regulator family FY138_00155 PF01553 Acyltransferase FY138_00160 PF04055 Radical SAM superfamily FY138_00160 PF01938 TRAM domain FY138_00160 PF00919 Uncharacterized protein family UPF0004 FY138_00165 PF02562 PhoH-like protein FY138_00170 PF02130 Uncharacterized protein family UPF0054 FY138_00175 PF00571 CBS domain FY138_00175 PF03471 Transporter associated domain FY138_00180 PF00795 Carbon-nitrogen hydrolase FY138_00185 PF01381 Helix-turn-helix FY138_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY138_00190 PF02772 S-adenosylmethionine synthetase, central domain FY138_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY138_00195 PF02390 Putative methyltransferase FY138_00200 PF00294 pfkB family carbohydrate kinase FY138_00205 PF02646 RmuC family FY138_00210 PF01327 Polypeptide deformylase FY138_00215 PF02911 Formyl transferase, C-terminal domain FY138_00215 PF00551 Formyl transferase FY138_00220 PF01416 tRNA pseudouridine synthase FY138_00230 PF07687 Peptidase dimerisation domain FY138_00230 PF01546 Peptidase family M20/M25/M40 FY138_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY138_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY138_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_00245 PF00672 HAMP domain FY138_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY138_00255 PF00011 Hsp20/alpha crystallin family FY138_00280 PF00696 Amino acid kinase family FY138_00290 PF01926 50S ribosome-binding GTPase FY138_00295 PF14849 YidC periplasmic domain FY138_00295 PF02096 60Kd inner membrane protein FY138_00300 PF00825 Ribonuclease P FY138_00305 PF00468 Ribosomal protein L34 FY138_00310 PF00672 HAMP domain FY138_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_00315 PF00512 His Kinase A (phospho-acceptor) domain FY138_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_00325 PF01209 ubiE/COQ5 methyltransferase family FY138_00330 PF00005 ABC transporter FY138_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY138_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY138_00350 PF00149 Calcineurin-like phosphoesterase FY138_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY138_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY138_00365 PF05544 Proline racemase FY138_00370 PF01979 Amidohydrolase family FY138_00375 PF00156 Phosphoribosyl transferase domain FY138_00380 PF00294 pfkB family carbohydrate kinase FY138_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY138_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY138_00400 PF00342 Phosphoglucose isomerase FY138_00405 PF00501 AMP-binding enzyme FY138_00405 PF13193 AMP-binding enzyme C-terminal domain FY138_00410 PF00005 ABC transporter FY138_00410 PF08402 TOBE domain FY138_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY138_00425 PF00593 TonB dependent receptor FY138_00425 PF07715 TonB-dependent Receptor Plug Domain FY138_00445 PF01679 Proteolipid membrane potential modulator FY138_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY138_00475 PF00512 His Kinase A (phospho-acceptor) domain FY138_00475 PF16736 Single Cache-like FY138_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_00475 PF00989 PAS fold FY138_00480 PF12849 PBP superfamily domain FY138_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY138_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY138_00495 PF00005 ABC transporter FY138_00500 PF01895 PhoU domain FY138_00505 PF00072 Response regulator receiver domain FY138_00505 PF00486 Transcriptional regulatory protein, C terminal FY138_00515 PF00202 Aminotransferase class-III FY138_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY138_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY138_00525 PF01430 Hsp33 protein FY138_00530 PF04379 ApaG domain FY138_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY138_00545 PF00692 dUTPase FY138_00600 PF10548 P22AR C-terminal domain FY138_00600 PF08346 AntA/AntB antirepressor FY138_00640 PF06689 ClpX C4-type zinc finger FY138_00640 PF10431 C-terminal, D2-small domain, of ClpB protein FY138_00640 PF07724 AAA domain (Cdc48 subfamily) FY138_00680 PF03592 Terminase small subunit FY138_00680 PF10668 Phage terminase small subunit FY138_00805 PF00589 Phage integrase family FY138_00805 PF13356 Arm DNA-binding domain FY138_00815 PF02796 Helix-turn-helix domain of resolvase FY138_00815 PF00239 Resolvase, N terminal domain FY138_00830 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FY138_00850 PF08671 Anti-repressor SinI FY138_00850 PF01381 Helix-turn-helix FY138_00890 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY138_00895 PF00230 Major intrinsic protein FY138_00935 PF00196 Bacterial regulatory proteins, luxR family FY138_00935 PF00072 Response regulator receiver domain FY138_00945 PF01180 Dihydroorotate dehydrogenase FY138_00980 PF02082 Transcriptional regulator FY138_00985 PF00270 DEAD/DEAH box helicase FY138_00985 PF08494 DEAD/H associated FY138_00985 PF00271 Helicase conserved C-terminal domain FY138_01005 PF01925 Sulfite exporter TauE/SafE FY138_01015 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_01015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_01015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_01015 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY138_01020 PF02803 Thiolase, C-terminal domain FY138_01020 PF00108 Thiolase, N-terminal domain FY138_01025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY138_01025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY138_01025 PF00378 Enoyl-CoA hydratase/isomerase FY138_01050 PF03334 Na+/H+ antiporter subunit FY138_01055 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY138_01060 PF01899 Na+/H+ ion antiporter subunit FY138_01065 PF00361 Proton-conducting membrane transporter FY138_01070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY138_01075 PF13244 Domain of unknown function (DUF4040) FY138_01075 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY138_01075 PF00361 Proton-conducting membrane transporter FY138_01075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY138_01085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_01095 PF00072 Response regulator receiver domain FY138_01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_01100 PF01584 CheW-like domain FY138_01100 PF02895 Signal transducing histidine kinase, homodimeric domain FY138_01100 PF01627 Hpt domain FY138_01105 PF01739 CheR methyltransferase, SAM binding domain FY138_01105 PF03705 CheR methyltransferase, all-alpha domain FY138_01110 PF00072 Response regulator receiver domain FY138_01110 PF01339 CheB methylesterase FY138_01115 PF00072 Response regulator receiver domain FY138_01120 PF03975 CheD chemotactic sensory transduction FY138_01130 PF01514 Secretory protein of YscJ/FliF family FY138_01130 PF08345 Flagellar M-ring protein C-terminal FY138_01135 PF00196 Bacterial regulatory proteins, luxR family FY138_01135 PF03472 Autoinducer binding domain FY138_01145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_01145 PF00672 HAMP domain FY138_01150 PF00512 His Kinase A (phospho-acceptor) domain FY138_01150 PF01627 Hpt domain FY138_01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_01150 PF00072 Response regulator receiver domain FY138_01150 PF00672 HAMP domain FY138_01155 PF01741 Large-conductance mechanosensitive channel, MscL FY138_01160 PF00155 Aminotransferase class I and II FY138_01165 PF01370 NAD dependent epimerase/dehydratase family FY138_01175 PF03884 DNA gyrase inhibitor YacG FY138_01180 PF02545 Maf-like protein FY138_01185 PF01176 Translation initiation factor 1A / IF-1 FY138_01195 PF06793 Uncharacterised protein family (UPF0262) FY138_01200 PF00815 Histidinol dehydrogenase FY138_01210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY138_01225 PF00700 Bacterial flagellin C-terminal helical region FY138_01225 PF00669 Bacterial flagellin N-terminal helical region FY138_01230 PF00700 Bacterial flagellin C-terminal helical region FY138_01230 PF00669 Bacterial flagellin N-terminal helical region FY138_01235 PF00700 Bacterial flagellin C-terminal helical region FY138_01235 PF00669 Bacterial flagellin N-terminal helical region FY138_01240 PF00813 FliP family FY138_01250 PF02107 Flagellar L-ring protein FY138_01260 PF02119 Flagellar P-ring protein FY138_01265 PF13144 Chaperone for flagella basal body P-ring formation FY138_01270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY138_01270 PF00460 Flagella basal body rod protein FY138_01275 PF02049 Flagellar hook-basal body complex protein FliE FY138_01280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY138_01285 PF00460 Flagella basal body rod protein FY138_01295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY138_01295 PF18269 T3SS EscN ATPase C-terminal domain FY138_01300 PF00460 Flagella basal body rod protein FY138_01300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY138_01310 PF01618 MotA/TolQ/ExbB proton channel family FY138_01315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY138_01320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY138_01325 PF01706 FliG C-terminal domain FY138_01325 PF14841 FliG middle domain FY138_01325 PF14842 FliG N-terminal domain FY138_01330 PF01312 FlhB HrpN YscU SpaS Family FY138_01340 PF00669 Bacterial flagellin N-terminal helical region FY138_01340 PF00700 Bacterial flagellin C-terminal helical region FY138_01350 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY138_01350 PF00691 OmpA family FY138_01360 PF02120 Flagellar hook-length control protein FliK FY138_01370 PF00486 Transcriptional regulatory protein, C terminal FY138_01375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY138_01375 PF07559 Flagellar basal body protein FlaE FY138_01375 PF00460 Flagella basal body rod protein FY138_01395 PF07378 Flagellar protein FlbT FY138_01400 PF03963 Flagellar hook capping protein - N-terminal region FY138_01405 PF01313 Bacterial export proteins, family 3 FY138_01410 PF00771 FHIPEP family FY138_01415 PF01311 Bacterial export proteins, family 1 FY138_01450 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY138_01450 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY138_01455 PF00356 Bacterial regulatory proteins, lacI family FY138_01460 PF01547 Bacterial extracellular solute-binding protein FY138_01465 PF00528 Binding-protein-dependent transport system inner membrane component FY138_01470 PF00528 Binding-protein-dependent transport system inner membrane component FY138_01475 PF00128 Alpha amylase, catalytic domain FY138_01480 PF00005 ABC transporter FY138_01480 PF17912 MalK OB fold domain FY138_01480 PF03459 TOBE domain FY138_01495 PF00920 Dehydratase family FY138_01500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY138_01505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY138_01505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY138_01510 PF01266 FAD dependent oxidoreductase FY138_01515 PF00120 Glutamine synthetase, catalytic domain FY138_01540 PF00463 Isocitrate lyase family FY138_01545 PF09856 Predicted transcriptional regulator (DUF2083) FY138_01545 PF06114 IrrE N-terminal-like domain FY138_01545 PF01381 Helix-turn-helix FY138_01550 PF13416 Bacterial extracellular solute-binding protein FY138_01555 PF08402 TOBE domain FY138_01555 PF00005 ABC transporter FY138_01560 PF00528 Binding-protein-dependent transport system inner membrane component FY138_01565 PF00528 Binding-protein-dependent transport system inner membrane component FY138_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_01580 PF13426 PAS domain FY138_01580 PF13188 PAS domain FY138_01580 PF00989 PAS fold FY138_01580 PF00512 His Kinase A (phospho-acceptor) domain FY138_01590 PF02541 Ppx/GppA phosphatase family FY138_01595 PF01728 FtsJ-like methyltransferase FY138_01600 PF07690 Major Facilitator Superfamily FY138_01605 PF00753 Metallo-beta-lactamase superfamily FY138_01610 PF00571 CBS domain FY138_01610 PF00478 IMP dehydrogenase / GMP reductase domain FY138_01620 PF00107 Zinc-binding dehydrogenase FY138_01620 PF08240 Alcohol dehydrogenase GroES-like domain FY138_01625 PF01738 Dienelactone hydrolase family FY138_01630 PF00994 Probable molybdopterin binding domain FY138_01635 PF08544 GHMP kinases C terminal FY138_01635 PF00288 GHMP kinases N terminal domain FY138_01645 PF00348 Polyprenyl synthetase FY138_01660 PF01343 Peptidase family S49 FY138_01660 PF06965 Na+/H+ antiporter 1 FY138_01670 PF02091 Glycyl-tRNA synthetase alpha subunit FY138_01680 PF04011 LemA family FY138_01685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY138_01695 PF05746 DALR anticodon binding domain FY138_01695 PF02092 Glycyl-tRNA synthetase beta subunit FY138_01700 PF04463 Protein of unknown function (DUF523) FY138_01705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_01705 PF17200 Single Cache domain 2 FY138_01705 PF00672 HAMP domain FY138_01715 PF02844 Phosphoribosylglycinamide synthetase, N domain FY138_01715 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY138_01715 PF02843 Phosphoribosylglycinamide synthetase, C domain FY138_01720 PF16921 Tex protein YqgF-like domain FY138_01720 PF09371 Tex-like protein N-terminal domain FY138_01720 PF00575 S1 RNA binding domain FY138_01720 PF17674 HHH domain FY138_01735 PF01040 UbiA prenyltransferase family FY138_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_01750 PF03466 LysR substrate binding domain FY138_01760 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY138_01765 PF04452 RNA methyltransferase FY138_01770 PF01384 Phosphate transporter family FY138_01780 PF05116 Sucrose-6F-phosphate phosphohydrolase FY138_01785 PF00534 Glycosyl transferases group 1 FY138_01785 PF13439 Glycosyltransferase Family 4 FY138_01790 PF07729 FCD domain FY138_01790 PF00392 Bacterial regulatory proteins, gntR family FY138_01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_01800 PF03466 LysR substrate binding domain FY138_01805 PF02913 FAD linked oxidases, C-terminal domain FY138_01805 PF01565 FAD binding domain FY138_01810 PF02913 FAD linked oxidases, C-terminal domain FY138_01810 PF01565 FAD binding domain FY138_01815 PF13183 4Fe-4S dicluster domain FY138_01815 PF02754 Cysteine-rich domain FY138_01825 PF17969 L,D-transpeptidase C-terminal domain FY138_01825 PF03734 L,D-transpeptidase catalytic domain FY138_01830 PF03352 Methyladenine glycosylase FY138_01840 PF03601 Conserved hypothetical protein 698 FY138_01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_01845 PF03466 LysR substrate binding domain FY138_01875 PF03129 Anticodon binding domain FY138_01875 PF13393 Histidyl-tRNA synthetase FY138_01885 PF13393 Histidyl-tRNA synthetase FY138_01890 PF01634 ATP phosphoribosyltransferase FY138_01895 PF07681 DoxX FY138_01905 PF00118 TCP-1/cpn60 chaperonin family FY138_01910 PF00166 Chaperonin 10 Kd subunit FY138_01920 PF06574 FAD synthetase FY138_01920 PF01687 Riboflavin kinase FY138_01925 PF08264 Anticodon-binding domain of tRNA FY138_01925 PF00133 tRNA synthetases class I (I, L, M and V) FY138_01935 PF14437 MafB19-like deaminase FY138_01940 PF00849 RNA pseudouridylate synthase FY138_01940 PF01479 S4 domain FY138_01950 PF01734 Patatin-like phospholipase FY138_01955 PF00999 Sodium/hydrogen exchanger family FY138_01955 PF02254 TrkA-N domain FY138_01960 PF01523 Putative modulator of DNA gyrase FY138_01965 PF00459 Inositol monophosphatase family FY138_01975 PF00534 Glycosyl transferases group 1 FY138_01975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY138_01985 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY138_01995 PF01119 DNA mismatch repair protein, C-terminal domain FY138_01995 PF08676 MutL C terminal dimerisation domain FY138_02000 PF00486 Transcriptional regulatory protein, C terminal FY138_02000 PF00072 Response regulator receiver domain FY138_02005 PF03707 Bacterial signalling protein N terminal repeat FY138_02005 PF00563 EAL domain FY138_02005 PF13188 PAS domain FY138_02005 PF00990 Diguanylate cyclase, GGDEF domain FY138_02010 PF08450 SMP-30/Gluconolactonase/LRE-like region FY138_02015 PF01081 KDPG and KHG aldolase FY138_02020 PF05035 2-keto-3-deoxy-galactonokinase FY138_02030 PF09339 IclR helix-turn-helix domain FY138_02030 PF01614 Bacterial transcriptional regulator FY138_02035 PF03472 Autoinducer binding domain FY138_02035 PF00196 Bacterial regulatory proteins, luxR family FY138_02045 PF10609 NUBPL iron-transfer P-loop NTPase FY138_02050 PF01544 CorA-like Mg2+ transporter protein FY138_02055 PF02705 K+ potassium transporter FY138_02070 PF00119 ATP synthase A chain FY138_02075 PF00137 ATP synthase subunit C FY138_02080 PF00430 ATP synthase B/B' CF(0) FY138_02085 PF00430 ATP synthase B/B' CF(0) FY138_02090 PF09828 Chromate resistance exported protein FY138_02095 PF02417 Chromate transporter FY138_02100 PF01351 Ribonuclease HII FY138_02115 PF02913 FAD linked oxidases, C-terminal domain FY138_02115 PF01565 FAD binding domain FY138_02120 PF03481 Putative GTP-binding controlling metal-binding FY138_02120 PF01300 Telomere recombination FY138_02130 PF00355 Rieske [2Fe-2S] domain FY138_02130 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY138_02135 PF00970 Oxidoreductase FAD-binding domain FY138_02135 PF00111 2Fe-2S iron-sulfur cluster binding domain FY138_02135 PF00175 Oxidoreductase NAD-binding domain FY138_02140 PF07886 BA14K-like protein FY138_02145 PF07886 BA14K-like protein FY138_02155 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY138_02155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_02155 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_02155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_02170 PF05958 tRNA (Uracil-5-)-methyltransferase FY138_02175 PF01479 S4 domain FY138_02175 PF01728 FtsJ-like methyltransferase FY138_02180 PF02203 Tar ligand binding domain homologue FY138_02180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_02180 PF00672 HAMP domain FY138_02190 PF01037 Lrp/AsnC ligand binding domain FY138_02215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY138_02215 PF02779 Transketolase, pyrimidine binding domain FY138_02215 PF02780 Transketolase, C-terminal domain FY138_02220 PF02678 Pirin FY138_02220 PF05726 Pirin C-terminal cupin domain FY138_02225 PF02609 Exonuclease VII small subunit FY138_02230 PF00850 Histone deacetylase domain FY138_02235 PF02632 BioY family FY138_02240 PF02361 Cobalt transport protein FY138_02245 PF00005 ABC transporter FY138_02250 PF06224 Winged helix DNA-binding domain FY138_02255 PF00925 GTP cyclohydrolase II FY138_02255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY138_02260 PF01264 Chorismate synthase FY138_02275 PF00300 Histidine phosphatase superfamily (branch 1) FY138_02285 PF00226 DnaJ domain FY138_02285 PF01556 DnaJ C terminal domain FY138_02285 PF00684 DnaJ central domain FY138_02295 PF01243 Pyridoxamine 5'-phosphate oxidase FY138_02295 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY138_02315 PF13419 Haloacid dehalogenase-like hydrolase FY138_02325 PF01523 Putative modulator of DNA gyrase FY138_02335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY138_02335 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY138_02340 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY138_02345 PF01040 UbiA prenyltransferase family FY138_02350 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY138_02355 PF00510 Cytochrome c oxidase subunit III FY138_02365 PF02104 SURF1 family FY138_02370 PF02401 LytB protein FY138_02375 PF01636 Phosphotransferase enzyme family FY138_02380 PF00075 RNase H FY138_02390 PF00462 Glutaredoxin FY138_02390 PF08534 Redoxin FY138_02400 PF02622 Uncharacterized ACR, COG1678 FY138_02405 PF05532 CsbD-like FY138_02410 PF15887 Putative zinc-binding metallo-peptidase FY138_02410 PF10005 zinc-ribbon domain FY138_02415 PF00563 EAL domain FY138_02415 PF00990 Diguanylate cyclase, GGDEF domain FY138_02415 PF03707 Bacterial signalling protein N terminal repeat FY138_02415 PF13188 PAS domain FY138_02420 PF13302 Acetyltransferase (GNAT) domain FY138_02425 PF00675 Insulinase (Peptidase family M16) FY138_02425 PF05193 Peptidase M16 inactive domain FY138_02430 PF00291 Pyridoxal-phosphate dependent enzyme FY138_02430 PF14821 Threonine synthase N terminus FY138_02450 PF13419 Haloacid dehalogenase-like hydrolase FY138_02455 PF00392 Bacterial regulatory proteins, gntR family FY138_02455 PF07729 FCD domain FY138_02470 PF18755 Restriction Enzyme Adenine Methylase Associated FY138_02470 PF01555 DNA methylase FY138_02475 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY138_02480 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY138_02490 PF00730 HhH-GPD superfamily base excision DNA repair protein FY138_02490 PF14815 NUDIX domain FY138_02505 PF13462 Thioredoxin FY138_02510 PF02463 RecF/RecN/SMC N terminal domain FY138_02515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_02520 PF00391 PEP-utilising enzyme, mobile domain FY138_02520 PF02896 PEP-utilising enzyme, TIM barrel domain FY138_02520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY138_02530 PF00375 Sodium:dicarboxylate symporter family FY138_02555 PF06039 Malate:quinone oxidoreductase (Mqo) FY138_02570 PF00009 Elongation factor Tu GTP binding domain FY138_02575 PF01507 Phosphoadenosine phosphosulfate reductase family FY138_02580 PF01507 Phosphoadenosine phosphosulfate reductase family FY138_02585 PF02082 Transcriptional regulator FY138_02595 PF00528 Binding-protein-dependent transport system inner membrane component FY138_02600 PF00528 Binding-protein-dependent transport system inner membrane component FY138_02605 PF00005 ABC transporter FY138_02605 PF12857 TOBE-like domain FY138_02610 PF14765 Polyketide synthase dehydratase FY138_02610 PF00550 Phosphopantetheine attachment site FY138_02610 PF08659 KR domain FY138_02610 PF02801 Beta-ketoacyl synthase, C-terminal domain FY138_02610 PF00109 Beta-ketoacyl synthase, N-terminal domain FY138_02610 PF00107 Zinc-binding dehydrogenase FY138_02610 PF08240 Alcohol dehydrogenase GroES-like domain FY138_02610 PF00698 Acyl transferase domain FY138_02610 PF16197 Ketoacyl-synthetase C-terminal extension FY138_02615 PF00563 EAL domain FY138_02615 PF01590 GAF domain FY138_02615 PF00990 Diguanylate cyclase, GGDEF domain FY138_02615 PF00989 PAS fold FY138_02625 PF13977 BetI-type transcriptional repressor, C-terminal FY138_02625 PF00440 Bacterial regulatory proteins, tetR family FY138_02630 PF00171 Aldehyde dehydrogenase family FY138_02635 PF00732 GMC oxidoreductase FY138_02635 PF05199 GMC oxidoreductase FY138_02665 PF02798 Glutathione S-transferase, N-terminal domain FY138_02665 PF00043 Glutathione S-transferase, C-terminal domain FY138_02675 PF07690 Major Facilitator Superfamily FY138_02685 PF05973 Phage derived protein Gp49-like (DUF891) FY138_02695 PF04679 ATP dependent DNA ligase C terminal region FY138_02695 PF01068 ATP dependent DNA ligase domain FY138_02695 PF04675 DNA ligase N terminus FY138_02705 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY138_02710 PF00403 Heavy-metal-associated domain FY138_02715 PF03734 L,D-transpeptidase catalytic domain FY138_02715 PF17969 L,D-transpeptidase C-terminal domain FY138_02720 PF03734 L,D-transpeptidase catalytic domain FY138_02720 PF17969 L,D-transpeptidase C-terminal domain FY138_02725 PF01047 MarR family FY138_02730 PF02566 OsmC-like protein FY138_02745 PF00005 ABC transporter FY138_02745 PF12848 ABC transporter FY138_02775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_02775 PF03466 LysR substrate binding domain FY138_02780 PF00106 short chain dehydrogenase FY138_02795 PF05872 Bacterial protein of unknown function (DUF853) FY138_02805 PF01638 HxlR-like helix-turn-helix FY138_02810 PF00106 short chain dehydrogenase FY138_02815 PF12833 Helix-turn-helix domain FY138_02825 PF00248 Aldo/keto reductase family FY138_02830 PF01062 Bestrophin, RFP-TM, chloride channel FY138_02835 PF13280 WYL domain FY138_02835 PF08279 HTH domain FY138_02850 PF01063 Amino-transferase class IV FY138_02855 PF00672 HAMP domain FY138_02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_02860 PF03466 LysR substrate binding domain FY138_02875 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY138_02875 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY138_02890 PF01810 LysE type translocator FY138_02895 PF01322 Cytochrome C' FY138_02900 PF00034 Cytochrome c FY138_02930 PF00561 alpha/beta hydrolase fold FY138_02935 PF00376 MerR family regulatory protein FY138_02935 PF09278 MerR, DNA binding FY138_02945 PF02583 Metal-sensitive transcriptional repressor FY138_02960 PF00005 ABC transporter FY138_02960 PF00571 CBS domain FY138_02965 PF00528 Binding-protein-dependent transport system inner membrane component FY138_02975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY138_02975 PF00326 Prolyl oligopeptidase family FY138_02985 PF00701 Dihydrodipicolinate synthetase family FY138_02995 PF02805 Metal binding domain of Ada FY138_02995 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY138_02995 PF12833 Helix-turn-helix domain FY138_02995 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY138_03000 PF01594 AI-2E family transporter FY138_03005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_03020 PF03006 Haemolysin-III related FY138_03030 PF01810 LysE type translocator FY138_03035 PF01641 SelR domain FY138_03040 PF00361 Proton-conducting membrane transporter FY138_03040 PF13244 Domain of unknown function (DUF4040) FY138_03040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY138_03045 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY138_03050 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY138_03055 PF00361 Proton-conducting membrane transporter FY138_03060 PF01899 Na+/H+ ion antiporter subunit FY138_03065 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY138_03070 PF03334 Na+/H+ antiporter subunit FY138_03075 PF05443 ROS/MUCR transcriptional regulator protein FY138_03090 PF02657 Fe-S metabolism associated domain FY138_03095 PF17264 Family of unknown function (DUF5330) FY138_03100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_03100 PF00512 His Kinase A (phospho-acceptor) domain FY138_03135 PF01810 LysE type translocator FY138_03140 PF03466 LysR substrate binding domain FY138_03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_03145 PF00912 Transglycosylase FY138_03145 PF00905 Penicillin binding protein transpeptidase domain FY138_03150 PF03692 Putative zinc- or iron-chelating domain FY138_03155 PF00905 Penicillin binding protein transpeptidase domain FY138_03165 PF00403 Heavy-metal-associated domain FY138_03170 PF00376 MerR family regulatory protein FY138_03170 PF09278 MerR, DNA binding FY138_03195 PF07690 Major Facilitator Superfamily FY138_03200 PF08244 Glycosyl hydrolases family 32 C terminal FY138_03200 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY138_03205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY138_03215 PF01037 Lrp/AsnC ligand binding domain FY138_03215 PF13404 AsnC-type helix-turn-helix domain FY138_03255 PF04860 Phage portal protein FY138_03345 PF00486 Transcriptional regulatory protein, C terminal FY138_03345 PF00072 Response regulator receiver domain FY138_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_03365 PF03100 CcmE FY138_03370 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY138_03370 PF01578 Cytochrome C assembly protein FY138_03375 PF03918 Cytochrome C biogenesis protein FY138_03380 PF13180 PDZ domain FY138_03385 PF00072 Response regulator receiver domain FY138_03385 PF00486 Transcriptional regulatory protein, C terminal FY138_03390 PF00672 HAMP domain FY138_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_03390 PF00512 His Kinase A (phospho-acceptor) domain FY138_03395 PF04134 Protein of unknown function, DUF393 FY138_03400 PF06629 MltA-interacting protein MipA FY138_03405 PF08335 GlnD PII-uridylyltransferase FY138_03405 PF03710 Glutamate-ammonia ligase adenylyltransferase FY138_03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_03410 PF00512 His Kinase A (phospho-acceptor) domain FY138_03410 PF00989 PAS fold FY138_03420 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY138_03420 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY138_03420 PF01433 Peptidase family M1 domain FY138_03425 PF00892 EamA-like transporter family FY138_03440 PF00012 Hsp70 protein FY138_03445 PF00990 Diguanylate cyclase, GGDEF domain FY138_03475 PF08240 Alcohol dehydrogenase GroES-like domain FY138_03475 PF00107 Zinc-binding dehydrogenase FY138_03480 PF01638 HxlR-like helix-turn-helix FY138_03485 PF02673 Bacitracin resistance protein BacA FY138_03490 PF00571 CBS domain FY138_03490 PF03448 MgtE intracellular N domain FY138_03490 PF01769 Divalent cation transporter FY138_03495 PF07690 Major Facilitator Superfamily FY138_03500 PF00781 Diacylglycerol kinase catalytic domain FY138_03505 PF00202 Aminotransferase class-III FY138_03520 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY138_03520 PF01048 Phosphorylase superfamily FY138_03545 PF00155 Aminotransferase class I and II FY138_03555 PF14759 Reductase C-terminal FY138_03555 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_03560 PF03328 HpcH/HpaI aldolase/citrate lyase family FY138_03575 PF02530 Porin subfamily FY138_03580 PF02530 Porin subfamily FY138_03585 PF01464 Transglycosylase SLT domain FY138_03585 PF14718 Soluble lytic murein transglycosylase L domain FY138_03590 PF00701 Dihydrodipicolinate synthetase family FY138_03595 PF01668 SmpB protein FY138_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_03610 PF01192 RNA polymerase Rpb6 FY138_03615 PF04607 Region found in RelA / SpoT proteins FY138_03615 PF02824 TGS domain FY138_03615 PF13291 ACT domain FY138_03630 PF01648 4'-phosphopantetheinyl transferase superfamily FY138_03635 PF10502 Signal peptidase, peptidase S26 FY138_03640 PF00035 Double-stranded RNA binding motif FY138_03640 PF14622 Ribonuclease-III-like FY138_03645 PF01926 50S ribosome-binding GTPase FY138_03645 PF07650 KH domain FY138_03655 PF00072 Response regulator receiver domain FY138_03660 PF02565 Recombination protein O C terminal FY138_03660 PF11967 Recombination protein O N terminal FY138_03665 PF07690 Major Facilitator Superfamily FY138_03670 PF08241 Methyltransferase domain FY138_03680 PF01966 HD domain FY138_03690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_03700 PF00005 ABC transporter FY138_03705 PF00528 Binding-protein-dependent transport system inner membrane component FY138_03710 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY138_03715 PF00924 Mechanosensitive ion channel FY138_03715 PF05552 Conserved TM helix FY138_03725 PF01966 HD domain FY138_03730 PF01571 Aminomethyltransferase folate-binding domain FY138_03750 PF00293 NUDIX domain FY138_03755 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY138_03765 PF00990 Diguanylate cyclase, GGDEF domain FY138_03765 PF00072 Response regulator receiver domain FY138_03770 PF01066 CDP-alcohol phosphatidyltransferase FY138_03775 PF02666 Phosphatidylserine decarboxylase FY138_03780 PF00005 ABC transporter FY138_03780 PF00664 ABC transporter transmembrane region FY138_03790 PF03641 Possible lysine decarboxylase FY138_03795 PF00905 Penicillin binding protein transpeptidase domain FY138_03795 PF03717 Penicillin-binding Protein dimerisation domain FY138_03800 PF00892 EamA-like transporter family FY138_03805 PF00561 alpha/beta hydrolase fold FY138_03820 PF04480 Protein of unknown function (DUF559) FY138_03825 PF01406 tRNA synthetases class I (C) catalytic domain FY138_03825 PF09190 DALR domain FY138_03830 PF00106 short chain dehydrogenase FY138_03835 PF00156 Phosphoribosyl transferase domain FY138_03835 PF13537 Glutamine amidotransferase domain FY138_03840 PF02674 Colicin V production protein FY138_03845 PF06745 KaiC FY138_03845 PF18073 Rubredoxin metal binding domain FY138_03855 PF00842 Alanine racemase, C-terminal domain FY138_03855 PF01168 Alanine racemase, N-terminal domain FY138_03860 PF12833 Helix-turn-helix domain FY138_03860 PF12852 Cupin FY138_03865 PF03591 AzlC protein FY138_03875 PF00772 DnaB-like helicase N terminal domain FY138_03875 PF03796 DnaB-like helicase C terminal domain FY138_03890 PF13533 Biotin-lipoyl like FY138_03895 PF03948 Ribosomal protein L9, C-terminal domain FY138_03895 PF01281 Ribosomal protein L9, N-terminal domain FY138_03905 PF01084 Ribosomal protein S18 FY138_03910 PF01250 Ribosomal protein S6 FY138_03920 PF00248 Aldo/keto reductase family FY138_03925 PF00698 Acyl transferase domain FY138_03935 PF00550 Phosphopantetheine attachment site FY138_03940 PF02801 Beta-ketoacyl synthase, C-terminal domain FY138_03940 PF00109 Beta-ketoacyl synthase, N-terminal domain FY138_03950 PF02618 YceG-like family FY138_03955 PF08340 Domain of unknown function (DUF1732) FY138_03955 PF03755 YicC-like family, N-terminal region FY138_03960 PF00625 Guanylate kinase FY138_03975 PF00398 Ribosomal RNA adenine dimethylase FY138_03980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY138_03990 PF04453 LPS transport system D FY138_03990 PF03968 OstA-like protein FY138_04005 PF00883 Cytosol aminopeptidase family, catalytic domain FY138_04005 PF02789 Cytosol aminopeptidase family, N-terminal domain FY138_04015 PF00563 EAL domain FY138_04015 PF00990 Diguanylate cyclase, GGDEF domain FY138_04015 PF03707 Bacterial signalling protein N terminal repeat FY138_04020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_04025 PF00360 Phytochrome region FY138_04025 PF00990 Diguanylate cyclase, GGDEF domain FY138_04025 PF01590 GAF domain FY138_04025 PF00563 EAL domain FY138_04030 PF03707 Bacterial signalling protein N terminal repeat FY138_04030 PF00990 Diguanylate cyclase, GGDEF domain FY138_04030 PF00563 EAL domain FY138_04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_04035 PF00512 His Kinase A (phospho-acceptor) domain FY138_04035 PF00989 PAS fold FY138_04040 PF00196 Bacterial regulatory proteins, luxR family FY138_04040 PF00072 Response regulator receiver domain FY138_04050 PF00005 ABC transporter FY138_04050 PF12848 ABC transporter FY138_04055 PF00990 Diguanylate cyclase, GGDEF domain FY138_04055 PF17158 Membrane-associated sensor, integral membrane domain FY138_04060 PF13417 Glutathione S-transferase, N-terminal domain FY138_04065 PF00334 Nucleoside diphosphate kinase FY138_04085 PF02391 MoaE protein FY138_04095 PF01066 CDP-alcohol phosphatidyltransferase FY138_04100 PF08459 UvrC Helix-hairpin-helix N-terminal FY138_04100 PF02151 UvrB/uvrC motif FY138_04100 PF01541 GIY-YIG catalytic domain FY138_04110 PF13505 Outer membrane protein beta-barrel domain FY138_04120 PF00445 Ribonuclease T2 family FY138_04130 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY138_04135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY138_04135 PF01568 Molydopterin dinucleotide binding domain FY138_04135 PF00384 Molybdopterin oxidoreductase FY138_04140 PF00293 NUDIX domain FY138_04150 PF00551 Formyl transferase FY138_04155 PF02769 AIR synthase related protein, C-terminal domain FY138_04155 PF00586 AIR synthase related protein, N-terminal domain FY138_04160 PF01209 ubiE/COQ5 methyltransferase family FY138_04165 PF01594 AI-2E family transporter FY138_04175 PF02503 Polyphosphate kinase middle domain FY138_04175 PF13090 Polyphosphate kinase C-terminal domain 2 FY138_04175 PF13089 Polyphosphate kinase N-terminal domain FY138_04175 PF17941 Polyphosphate kinase C-terminal domain 1 FY138_04180 PF02541 Ppx/GppA phosphatase family FY138_04185 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_04205 PF00211 Adenylate and Guanylate cyclase catalytic domain FY138_04215 PF01612 3'-5' exonuclease FY138_04215 PF00570 HRDC domain FY138_04220 PF07690 Major Facilitator Superfamily FY138_04225 PF00152 tRNA synthetases class II (D, K and N) FY138_04225 PF02938 GAD domain FY138_04225 PF01336 OB-fold nucleic acid binding domain FY138_04235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_04235 PF00672 HAMP domain FY138_04240 PF01740 STAS domain FY138_04240 PF00916 Sulfate permease family FY138_04250 PF00521 DNA gyrase/topoisomerase IV, subunit A FY138_04250 PF03989 DNA gyrase C-terminal domain, beta-propeller FY138_04255 PF04377 Arginine-tRNA-protein transferase, C terminus FY138_04255 PF04376 Arginine-tRNA-protein transferase, N terminus FY138_04265 PF00490 Delta-aminolevulinic acid dehydratase FY138_04285 PF00464 Serine hydroxymethyltransferase FY138_04290 PF03477 ATP cone domain FY138_04295 PF01872 RibD C-terminal domain FY138_04295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY138_04300 PF00677 Lumazine binding domain FY138_04305 PF01810 LysE type translocator FY138_04310 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY138_04315 PF01029 NusB family FY138_04320 PF07690 Major Facilitator Superfamily FY138_04325 PF03030 Inorganic H+ pyrophosphatase FY138_04345 PF02504 Fatty acid synthesis protein FY138_04350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY138_04350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY138_04355 PF00216 Bacterial DNA-binding protein FY138_04360 PF13411 MerR HTH family regulatory protein FY138_04375 PF00403 Heavy-metal-associated domain FY138_04380 PF00175 Oxidoreductase NAD-binding domain FY138_04380 PF00970 Oxidoreductase FAD-binding domain FY138_04380 PF00111 2Fe-2S iron-sulfur cluster binding domain FY138_04385 PF00376 MerR family regulatory protein FY138_04385 PF09278 MerR, DNA binding FY138_04390 PF00528 Binding-protein-dependent transport system inner membrane component FY138_04395 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_04395 PF00528 Binding-protein-dependent transport system inner membrane component FY138_04400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_04400 PF00005 ABC transporter FY138_04405 PF00005 ABC transporter FY138_04405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_04410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_04420 PF02386 Cation transport protein FY138_04425 PF00291 Pyridoxal-phosphate dependent enzyme FY138_04425 PF00585 C-terminal regulatory domain of Threonine dehydratase FY138_04435 PF00990 Diguanylate cyclase, GGDEF domain FY138_04440 PF02525 Flavodoxin-like fold FY138_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_04445 PF03466 LysR substrate binding domain FY138_04450 PF02872 5'-nucleotidase, C-terminal domain FY138_04450 PF00149 Calcineurin-like phosphoesterase FY138_04470 PF00581 Rhodanese-like domain FY138_04475 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY138_04475 PF02272 DHHA1 domain FY138_04475 PF01411 tRNA synthetases class II (A) FY138_04480 PF00291 Pyridoxal-phosphate dependent enzyme FY138_04480 PF00571 CBS domain FY138_04485 PF00875 DNA photolyase FY138_04485 PF03441 FAD binding domain of DNA photolyase FY138_04495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY138_04495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY138_04525 PF06055 Exopolysaccharide synthesis, ExoD FY138_04530 PF09335 SNARE associated Golgi protein FY138_04575 PF02397 Bacterial sugar transferase FY138_04580 PF00534 Glycosyl transferases group 1 FY138_04605 PF02628 Cytochrome oxidase assembly protein FY138_04610 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY138_04615 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY138_04620 PF00491 Arginase family FY138_04625 PF00380 Ribosomal protein S9/S16 FY138_04630 PF00572 Ribosomal protein L13 FY138_04640 PF13380 CoA binding domain FY138_04645 PF01053 Cys/Met metabolism PLP-dependent enzyme FY138_04670 PF00067 Cytochrome P450 FY138_04675 PF00990 Diguanylate cyclase, GGDEF domain FY138_04680 PF00574 Clp protease FY138_04685 PF10431 C-terminal, D2-small domain, of ClpB protein FY138_04685 PF07724 AAA domain (Cdc48 subfamily) FY138_04685 PF06689 ClpX C4-type zinc finger FY138_04690 PF00004 ATPase family associated with various cellular activities (AAA) FY138_04690 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY138_04690 PF05362 Lon protease (S16) C-terminal proteolytic domain FY138_04695 PF00216 Bacterial DNA-binding protein FY138_04700 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY138_04725 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY138_04730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY138_04735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY138_04745 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY138_04760 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY138_04760 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY138_04760 PF10531 SLBB domain FY138_04765 PF00384 Molybdopterin oxidoreductase FY138_04765 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY138_04765 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY138_04770 PF00146 NADH dehydrogenase FY138_04775 PF12838 4Fe-4S dicluster domain FY138_04780 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY138_04785 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY138_04790 PF00361 Proton-conducting membrane transporter FY138_04790 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY138_04795 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY138_04795 PF00361 Proton-conducting membrane transporter FY138_04800 PF00361 Proton-conducting membrane transporter FY138_04805 PF08279 HTH domain FY138_04805 PF03099 Biotin/lipoate A/B protein ligase family FY138_04805 PF02237 Biotin protein ligase C terminal domain FY138_04810 PF12706 Beta-lactamase superfamily domain FY138_04810 PF17770 Ribonuclease J C-terminal domain FY138_04810 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY138_04820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY138_04820 PF03129 Anticodon binding domain FY138_04825 PF02687 FtsX-like permease family FY138_04825 PF12704 MacB-like periplasmic core domain FY138_04830 PF00005 ABC transporter FY138_04835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY138_04835 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY138_04835 PF02811 PHP domain FY138_04835 PF14579 Helix-hairpin-helix motif FY138_04845 PF00817 impB/mucB/samB family FY138_04845 PF11799 impB/mucB/samB family C-terminal domain FY138_04865 PF00072 Response regulator receiver domain FY138_04870 PF00990 Diguanylate cyclase, GGDEF domain FY138_04870 PF00072 Response regulator receiver domain FY138_04875 PF00471 Ribosomal protein L33 FY138_04880 PF07690 Major Facilitator Superfamily FY138_04895 PF00773 RNB domain FY138_04895 PF08206 Ribonuclease B OB domain FY138_04895 PF08461 Ribonuclease R winged-helix domain FY138_04895 PF17876 Cold shock domain FY138_04895 PF00575 S1 RNA binding domain FY138_04900 PF01131 DNA topoisomerase FY138_04900 PF13368 Topoisomerase C-terminal repeat FY138_04900 PF01396 Topoisomerase DNA binding C4 zinc finger FY138_04900 PF01751 Toprim domain FY138_04910 PF02481 DNA recombination-mediator protein A FY138_04910 PF17782 DprA winged helix domain FY138_04915 PF02660 Glycerol-3-phosphate acyltransferase FY138_04920 PF01979 Amidohydrolase family FY138_04925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY138_04925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY138_04940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_04940 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_04940 PF18158 Adaptive response protein AidB N-terminal domain FY138_04945 PF00583 Acetyltransferase (GNAT) family FY138_04965 PF03652 Holliday junction resolvase FY138_04970 PF03831 PhnA domain FY138_04970 PF08274 PhnA Zinc-Ribbon FY138_04980 PF02686 Glu-tRNAGln amidotransferase C subunit FY138_04985 PF01425 Amidase FY138_04990 PF00583 Acetyltransferase (GNAT) family FY138_04990 PF13673 Acetyltransferase (GNAT) domain FY138_04995 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY138_05010 PF02637 GatB domain FY138_05010 PF02934 GatB/GatE catalytic domain FY138_05040 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY138_05045 PF02785 Biotin carboxylase C-terminal domain FY138_05045 PF00289 Biotin carboxylase, N-terminal domain FY138_05045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_05050 PF00364 Biotin-requiring enzyme FY138_05055 PF01220 Dehydroquinase class II FY138_05065 PF00155 Aminotransferase class I and II FY138_05090 PF12111 Polyribonucleotide phosphorylase C terminal FY138_05090 PF10150 Ribonuclease E/G family FY138_05090 PF00575 S1 RNA binding domain FY138_05095 PF01520 N-acetylmuramoyl-L-alanine amidase FY138_05100 PF17092 Penicillin-binding protein OB-like domain FY138_05100 PF00912 Transglycosylase FY138_05100 PF00905 Penicillin binding protein transpeptidase domain FY138_05120 PF01513 ATP-NAD kinase FY138_05125 PF02567 Phenazine biosynthesis-like protein FY138_05130 PF00679 Elongation factor G C-terminus FY138_05130 PF03764 Elongation factor G, domain IV FY138_05130 PF00009 Elongation factor Tu GTP binding domain FY138_05145 PF00111 2Fe-2S iron-sulfur cluster binding domain FY138_05155 PF00809 Pterin binding enzyme FY138_05160 PF02152 Dihydroneopterin aldolase FY138_05165 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY138_05175 PF05128 Domain of unknown function (DUF697) FY138_05180 PF04317 YcjX-like family, DUF463 FY138_05190 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY138_05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_05205 PF00512 His Kinase A (phospho-acceptor) domain FY138_05205 PF08448 PAS fold FY138_05205 PF13188 PAS domain FY138_05205 PF00072 Response regulator receiver domain FY138_05210 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY138_05215 PF10431 C-terminal, D2-small domain, of ClpB protein FY138_05215 PF02861 Clp amino terminal domain, pathogenicity island component FY138_05215 PF07724 AAA domain (Cdc48 subfamily) FY138_05215 PF00004 ATPase family associated with various cellular activities (AAA) FY138_05215 PF17871 AAA lid domain FY138_05235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_05235 PF03466 LysR substrate binding domain FY138_05245 PF01230 HIT domain FY138_05270 PF00318 Ribosomal protein S2 FY138_05275 PF00889 Elongation factor TS FY138_05280 PF00696 Amino acid kinase family FY138_05285 PF01765 Ribosome recycling factor FY138_05290 PF01255 Putative undecaprenyl diphosphate synthase FY138_05300 PF17820 PDZ domain FY138_05300 PF02163 Peptidase family M50 FY138_05305 PF01103 Surface antigen FY138_05305 PF07244 Surface antigen variable number repeat FY138_05310 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_05310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY138_05315 PF07977 FabA-like domain FY138_05320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY138_05320 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_05325 PF17930 LpxI N-terminal domain FY138_05325 PF06230 LpxI C-terminal domain FY138_05330 PF02684 Lipid-A-disaccharide synthetase FY138_05335 PF00392 Bacterial regulatory proteins, gntR family FY138_05335 PF07729 FCD domain FY138_05340 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_05345 PF00528 Binding-protein-dependent transport system inner membrane component FY138_05350 PF00528 Binding-protein-dependent transport system inner membrane component FY138_05355 PF00005 ABC transporter FY138_05360 PF00285 Citrate synthase, C-terminal domain FY138_05375 PF01726 LexA DNA binding domain FY138_05375 PF00717 Peptidase S24-like FY138_05400 PF00437 Type II/IV secretion system protein FY138_05400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FY138_05405 PF00482 Type II secretion system (T2SS), protein F FY138_05425 PF08334 Type II secretion system (T2SS), protein G FY138_05425 PF07963 Prokaryotic N-terminal methylation motif FY138_05435 PF00263 Bacterial type II and III secretion system protein FY138_05435 PF03958 Bacterial type II/III secretion system short domain FY138_05460 PF00793 DAHP synthetase I family FY138_05465 PF00113 Enolase, C-terminal TIM barrel domain FY138_05465 PF03952 Enolase, N-terminal domain FY138_05475 PF00676 Dehydrogenase E1 component FY138_05480 PF00364 Biotin-requiring enzyme FY138_05480 PF02779 Transketolase, pyrimidine binding domain FY138_05480 PF02780 Transketolase, C-terminal domain FY138_05485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY138_05485 PF00364 Biotin-requiring enzyme FY138_05485 PF02817 e3 binding domain FY138_05495 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_05495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY138_05505 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY138_05505 PF04055 Radical SAM superfamily FY138_05510 PF00892 EamA-like transporter family FY138_05525 PF03364 Polyketide cyclase / dehydrase and lipid transport FY138_05530 PF02464 Competence-damaged protein FY138_05535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY138_05535 PF02542 YgbB family FY138_05540 PF01207 Dihydrouridine synthase (Dus) FY138_05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_05545 PF00512 His Kinase A (phospho-acceptor) domain FY138_05545 PF00989 PAS fold FY138_05550 PF02954 Bacterial regulatory protein, Fis family FY138_05550 PF00072 Response regulator receiver domain FY138_05550 PF00158 Sigma-54 interaction domain FY138_05555 PF00672 HAMP domain FY138_05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_05555 PF00512 His Kinase A (phospho-acceptor) domain FY138_05555 PF00989 PAS fold FY138_05560 PF02954 Bacterial regulatory protein, Fis family FY138_05560 PF00072 Response regulator receiver domain FY138_05560 PF00158 Sigma-54 interaction domain FY138_05565 PF02080 TrkA-C domain FY138_05565 PF02254 TrkA-N domain FY138_05570 PF17209 Hfq protein FY138_05575 PF16360 GTP-binding GTPase Middle Region FY138_05575 PF13167 GTP-binding GTPase N-terminal FY138_05575 PF01926 50S ribosome-binding GTPase FY138_05580 PF03819 MazG nucleotide pyrophosphohydrolase domain FY138_05590 PF10414 Sirohaem synthase dimerisation region FY138_05590 PF14824 Sirohaem biosynthesis protein central FY138_05590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_05610 PF00175 Oxidoreductase NAD-binding domain FY138_05610 PF00970 Oxidoreductase FAD-binding domain FY138_05630 PF02347 Glycine cleavage system P-protein FY138_05635 PF01597 Glycine cleavage H-protein FY138_05640 PF01571 Aminomethyltransferase folate-binding domain FY138_05640 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY138_05665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY138_05670 PF00849 RNA pseudouridylate synthase FY138_05670 PF01479 S4 domain FY138_05675 PF13419 Haloacid dehalogenase-like hydrolase FY138_05690 PF01042 Endoribonuclease L-PSP FY138_05695 PF00756 Putative esterase FY138_05705 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY138_05720 PF00578 AhpC/TSA family FY138_05720 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY138_05725 PF00043 Glutathione S-transferase, C-terminal domain FY138_05725 PF02798 Glutathione S-transferase, N-terminal domain FY138_05740 PF03358 NADPH-dependent FMN reductase FY138_05745 PF03960 ArsC family FY138_05750 PF01758 Sodium Bile acid symporter family FY138_05755 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY138_05765 PF00654 Voltage gated chloride channel FY138_05770 PF03099 Biotin/lipoate A/B protein ligase family FY138_05770 PF12706 Beta-lactamase superfamily domain FY138_05775 PF01026 TatD related DNase FY138_05780 PF08264 Anticodon-binding domain of tRNA FY138_05780 PF09334 tRNA synthetases class I (M) FY138_05785 PF09115 DNA polymerase III, delta subunit, C terminal FY138_05790 PF02223 Thymidylate kinase FY138_05795 PF07943 Penicillin-binding protein 5, C-terminal domain FY138_05795 PF00768 D-alanyl-D-alanine carboxypeptidase FY138_05800 PF05036 Sporulation related domain FY138_05800 PF03330 Lytic transglycolase FY138_05840 PF03989 DNA gyrase C-terminal domain, beta-propeller FY138_05840 PF00521 DNA gyrase/topoisomerase IV, subunit A FY138_05845 PF01914 MarC family integral membrane protein FY138_05850 PF01743 Poly A polymerase head domain FY138_05850 PF00571 CBS domain FY138_05860 PF00436 Single-strand binding protein family FY138_05865 PF17755 UvrA DNA-binding domain FY138_05865 PF17760 UvrA interaction domain FY138_05875 PF01207 Dihydrouridine synthase (Dus) FY138_05880 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY138_05885 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_05895 PF00950 ABC 3 transport family FY138_05900 PF00005 ABC transporter FY138_05905 PF01297 Zinc-uptake complex component A periplasmic FY138_05910 PF00356 Bacterial regulatory proteins, lacI family FY138_05920 PF00248 Aldo/keto reductase family FY138_05930 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY138_05930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY138_05935 PF03597 Cytochrome oxidase maturation protein cbb3-type FY138_05945 PF05751 FixH FY138_05950 PF13746 4Fe-4S dicluster domain FY138_05950 PF12801 4Fe-4S binding domain FY138_05950 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY138_05970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY138_05970 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY138_05985 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY138_05990 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY138_06010 PF09278 MerR, DNA binding FY138_06010 PF00376 MerR family regulatory protein FY138_06015 PF01769 Divalent cation transporter FY138_06015 PF00571 CBS domain FY138_06015 PF03448 MgtE intracellular N domain FY138_06020 PF00384 Molybdopterin oxidoreductase FY138_06030 PF01327 Polypeptide deformylase FY138_06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_06040 PF00512 His Kinase A (phospho-acceptor) domain FY138_06040 PF00989 PAS fold FY138_06050 PF03099 Biotin/lipoate A/B protein ligase family FY138_06055 PF08240 Alcohol dehydrogenase GroES-like domain FY138_06055 PF00107 Zinc-binding dehydrogenase FY138_06080 PF02355 Protein export membrane protein FY138_06080 PF07549 SecD/SecF GG Motif FY138_06085 PF02699 Preprotein translocase subunit FY138_06095 PF08240 Alcohol dehydrogenase GroES-like domain FY138_06095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY138_06100 PF00440 Bacterial regulatory proteins, tetR family FY138_06100 PF08360 QacR-like protein, C-terminal region FY138_06105 PF00067 Cytochrome P450 FY138_06115 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_06115 PF06426 Serine acetyltransferase, N-terminal FY138_06120 PF00561 alpha/beta hydrolase fold FY138_06130 PF01494 FAD binding domain FY138_06135 PF01053 Cys/Met metabolism PLP-dependent enzyme FY138_06140 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_06145 PF00528 Binding-protein-dependent transport system inner membrane component FY138_06150 PF00528 Binding-protein-dependent transport system inner membrane component FY138_06155 PF00005 ABC transporter FY138_06170 PF01368 DHH family FY138_06170 PF17768 RecJ OB domain FY138_06170 PF02272 DHHA1 domain FY138_06180 PF00742 Homoserine dehydrogenase FY138_06180 PF01842 ACT domain FY138_06180 PF03447 Homoserine dehydrogenase, NAD binding domain FY138_06185 PF00155 Aminotransferase class I and II FY138_06190 PF01156 Inosine-uridine preferring nucleoside hydrolase FY138_06195 PF01925 Sulfite exporter TauE/SafE FY138_06210 PF08240 Alcohol dehydrogenase GroES-like domain FY138_06210 PF00107 Zinc-binding dehydrogenase FY138_06215 PF00109 Beta-ketoacyl synthase, N-terminal domain FY138_06215 PF02801 Beta-ketoacyl synthase, C-terminal domain FY138_06225 PF07977 FabA-like domain FY138_06230 PF00550 Phosphopantetheine attachment site FY138_06235 PF04055 Radical SAM superfamily FY138_06240 PF13545 Crp-like helix-turn-helix domain FY138_06240 PF00027 Cyclic nucleotide-binding domain FY138_06250 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY138_06255 PF17746 SfsA N-terminal OB domain FY138_06255 PF03749 Sugar fermentation stimulation protein RE domain FY138_06260 PF00557 Metallopeptidase family M24 FY138_06265 PF04002 RadC-like JAB domain FY138_06280 PF01474 Class-II DAHP synthetase family FY138_06295 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_06295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY138_06305 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY138_06310 PF13419 Haloacid dehalogenase-like hydrolase FY138_06320 PF10415 Fumarase C C-terminus FY138_06320 PF00206 Lyase FY138_06330 PF00117 Glutamine amidotransferase class-I FY138_06330 PF06418 CTP synthase N-terminus FY138_06335 PF03840 Preprotein translocase SecG subunit FY138_06340 PF00121 Triosephosphate isomerase FY138_06350 PF00204 DNA gyrase B FY138_06350 PF00986 DNA gyrase B subunit, carboxyl terminus FY138_06350 PF01751 Toprim domain FY138_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_06355 PF01370 NAD dependent epimerase/dehydratase family FY138_06360 PF00574 Clp protease FY138_06370 PF01022 Bacterial regulatory protein, arsR family FY138_06375 PF13091 PLD-like domain FY138_06380 PF00072 Response regulator receiver domain FY138_06385 PF01266 FAD dependent oxidoreductase FY138_06385 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY138_06385 PF01571 Aminomethyltransferase folate-binding domain FY138_06385 PF16350 FAD dependent oxidoreductase central domain FY138_06395 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY138_06395 PF12795 Mechanosensitive ion channel porin domain FY138_06395 PF00924 Mechanosensitive ion channel FY138_06460 PF00005 ABC transporter FY138_06465 PF02405 Permease MlaE FY138_06470 PF13378 Enolase C-terminal domain-like FY138_06470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_06480 PF01515 Phosphate acetyl/butaryl transferase FY138_06480 PF00390 Malic enzyme, N-terminal domain FY138_06480 PF03949 Malic enzyme, NAD binding domain FY138_06490 PF00881 Nitroreductase family FY138_06495 PF07676 WD40-like Beta Propeller Repeat FY138_06505 PF00795 Carbon-nitrogen hydrolase FY138_06505 PF02540 NAD synthase FY138_06510 PF00884 Sulfatase FY138_06520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY138_06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_06535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY138_06535 PF05698 Bacterial trigger factor protein (TF) C-terminus FY138_06535 PF05697 Bacterial trigger factor protein (TF) FY138_06555 PF01134 Glucose inhibited division protein A FY138_06575 PF00107 Zinc-binding dehydrogenase FY138_06575 PF08240 Alcohol dehydrogenase GroES-like domain FY138_06585 PF00550 Phosphopantetheine attachment site FY138_06590 PF13193 AMP-binding enzyme C-terminal domain FY138_06590 PF00501 AMP-binding enzyme FY138_06600 PF00117 Glutamine amidotransferase class-I FY138_06600 PF04715 Anthranilate synthase component I, N terminal region FY138_06600 PF00425 chorismate binding enzyme FY138_06605 PF01702 Queuine tRNA-ribosyltransferase FY138_06610 PF02547 Queuosine biosynthesis protein FY138_06615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY138_06620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY138_06625 PF01467 Cytidylyltransferase-like FY138_06640 PF00591 Glycosyl transferase family, a/b domain FY138_06640 PF02885 Glycosyl transferase family, helical bundle domain FY138_06645 PF00218 Indole-3-glycerol phosphate synthase FY138_06650 PF01967 MoaC family FY138_06655 PF03454 MoeA C-terminal region (domain IV) FY138_06655 PF00994 Probable molybdopterin binding domain FY138_06655 PF03453 MoeA N-terminal region (domain I and II) FY138_06660 PF17158 Membrane-associated sensor, integral membrane domain FY138_06660 PF00990 Diguanylate cyclase, GGDEF domain FY138_06670 PF02254 TrkA-N domain FY138_06670 PF00999 Sodium/hydrogen exchanger family FY138_06680 PF04055 Radical SAM superfamily FY138_06680 PF06463 Molybdenum Cofactor Synthesis C FY138_06690 PF07690 Major Facilitator Superfamily FY138_06695 PF12804 MobA-like NTP transferase domain FY138_06700 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY138_06705 PF01551 Peptidase family M23 FY138_06715 PF01975 Survival protein SurE FY138_06720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY138_06720 PF02403 Seryl-tRNA synthetase N-terminal domain FY138_06725 PF00902 Sec-independent protein translocase protein (TatC) FY138_06730 PF02416 mttA/Hcf106 family FY138_06735 PF02416 mttA/Hcf106 family FY138_06740 PF04079 Segregation and condensation complex subunit ScpB FY138_06745 PF02616 Segregation and condensation protein ScpA FY138_06750 PF00933 Glycosyl hydrolase family 3 N terminal domain FY138_06760 PF03485 Arginyl tRNA synthetase N terminal domain FY138_06760 PF00750 tRNA synthetases class I (R) FY138_06760 PF05746 DALR anticodon binding domain FY138_06765 PF01966 HD domain FY138_06765 PF13286 Phosphohydrolase-associated domain FY138_06770 PF01521 Iron-sulphur cluster biosynthesis FY138_06780 PF08238 Sel1 repeat FY138_06790 PF00133 tRNA synthetases class I (I, L, M and V) FY138_06790 PF08264 Anticodon-binding domain of tRNA FY138_06790 PF10458 Valyl tRNA synthetase tRNA binding arm FY138_06940 PF00565 Staphylococcal nuclease homologue FY138_07015 PF06381 Protein of unknown function (DUF1073) FY138_07065 PF11638 DnaA N-terminal domain FY138_07065 PF08299 Bacterial dnaA protein helix-turn-helix FY138_07065 PF00308 Bacterial dnaA protein FY138_07080 PF00145 C-5 cytosine-specific DNA methylase FY138_07085 PF14528 LAGLIDADG-like domain FY138_07085 PF03796 DnaB-like helicase C terminal domain FY138_07085 PF00772 DnaB-like helicase N terminal domain FY138_07245 PF03358 NADPH-dependent FMN reductase FY138_07250 PF02464 Competence-damaged protein FY138_07250 PF18146 Damage-inducible protein CinA KH domain FY138_07250 PF00994 Probable molybdopterin binding domain FY138_07255 PF00582 Universal stress protein family FY138_07260 PF00156 Phosphoribosyl transferase domain FY138_07270 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY138_07270 PF02867 Ribonucleotide reductase, barrel domain FY138_07285 PF01566 Natural resistance-associated macrophage protein FY138_07295 PF00664 ABC transporter transmembrane region FY138_07295 PF00005 ABC transporter FY138_07300 PF01594 AI-2E family transporter FY138_07305 PF00583 Acetyltransferase (GNAT) family FY138_07335 PF03129 Anticodon binding domain FY138_07335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY138_07335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY138_07335 PF02824 TGS domain FY138_07345 PF01809 Putative membrane protein insertion efficiency factor FY138_07355 PF01227 GTP cyclohydrolase I FY138_07360 PF01502 Phosphoribosyl-AMP cyclohydrolase FY138_07365 PF01734 Patatin-like phospholipase FY138_07375 PF00571 CBS domain FY138_07375 PF00478 IMP dehydrogenase / GMP reductase domain FY138_07410 PF03315 Serine dehydratase beta chain FY138_07410 PF03313 Serine dehydratase alpha chain FY138_07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_07450 PF03466 LysR substrate binding domain FY138_07460 PF12833 Helix-turn-helix domain FY138_07460 PF01965 DJ-1/PfpI family FY138_07465 PF03853 YjeF-related protein N-terminus FY138_07465 PF01256 Carbohydrate kinase FY138_07475 PF00543 Nitrogen regulatory protein P-II FY138_07480 PF03951 Glutamine synthetase, beta-Grasp domain FY138_07480 PF00120 Glutamine synthetase, catalytic domain FY138_07490 PF08755 Hemimethylated DNA-binding protein YccV like FY138_07500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_07510 PF00892 EamA-like transporter family FY138_07520 PF17757 UvrB interaction domain FY138_07520 PF00270 DEAD/DEAH box helicase FY138_07520 PF02559 CarD-like/TRCF domain FY138_07520 PF00271 Helicase conserved C-terminal domain FY138_07520 PF03461 TRCF domain FY138_07530 PF00271 Helicase conserved C-terminal domain FY138_07530 PF00270 DEAD/DEAH box helicase FY138_07530 PF17191 RecG wedge domain FY138_07545 PF01850 PIN domain FY138_07560 PF01380 SIS domain FY138_07570 PF12804 MobA-like NTP transferase domain FY138_07570 PF14602 Hexapeptide repeat of succinyl-transferase FY138_07570 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_07575 PF00392 Bacterial regulatory proteins, gntR family FY138_07575 PF07729 FCD domain FY138_07580 PF02608 ABC transporter substrate-binding protein PnrA-like FY138_07585 PF02653 Branched-chain amino acid transport system / permease component FY138_07590 PF02653 Branched-chain amino acid transport system / permease component FY138_07595 PF00005 ABC transporter FY138_07605 PF01494 FAD binding domain FY138_07610 PF03547 Membrane transport protein FY138_07615 PF02683 Cytochrome C biogenesis protein transmembrane region FY138_07635 PF00313 'Cold-shock' DNA-binding domain FY138_07685 PF12704 MacB-like periplasmic core domain FY138_07685 PF00005 ABC transporter FY138_07685 PF02687 FtsX-like permease family FY138_07690 PF02687 FtsX-like permease family FY138_07690 PF00005 ABC transporter FY138_07690 PF12704 MacB-like periplasmic core domain FY138_07710 PF01521 Iron-sulphur cluster biosynthesis FY138_07715 PF01883 Iron-sulfur cluster assembly protein FY138_07720 PF00266 Aminotransferase class-V FY138_07725 PF01458 Uncharacterized protein family (UPF0051) FY138_07730 PF00005 ABC transporter FY138_07735 PF01458 Uncharacterized protein family (UPF0051) FY138_07740 PF00266 Aminotransferase class-V FY138_07745 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY138_07750 PF03702 Anhydro-N-acetylmuramic acid kinase FY138_07755 PF00579 tRNA synthetases class I (W and Y) FY138_07765 PF00578 AhpC/TSA family FY138_07770 PF04305 Protein of unknown function (DUF455) FY138_07775 PF01476 LysM domain FY138_07775 PF08525 Opacity-associated protein A N-terminal motif FY138_07775 PF01551 Peptidase family M23 FY138_07780 PF00270 DEAD/DEAH box helicase FY138_07780 PF00271 Helicase conserved C-terminal domain FY138_07795 PF00834 Ribulose-phosphate 3 epimerase family FY138_07805 PF10397 Adenylosuccinate lyase C-terminus FY138_07805 PF00206 Lyase FY138_07815 PF01259 SAICAR synthetase FY138_07820 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY138_07840 PF00392 Bacterial regulatory proteins, gntR family FY138_07840 PF00155 Aminotransferase class I and II FY138_07845 PF00586 AIR synthase related protein, N-terminal domain FY138_07845 PF02769 AIR synthase related protein, C-terminal domain FY138_07845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY138_07865 PF00462 Glutaredoxin FY138_07870 PF07690 Major Facilitator Superfamily FY138_07875 PF00459 Inositol monophosphatase family FY138_07880 PF00459 Inositol monophosphatase family FY138_07885 PF01171 PP-loop family FY138_07890 PF04960 Glutaminase FY138_07895 PF00163 Ribosomal protein S4/S9 N-terminal domain FY138_07895 PF01479 S4 domain FY138_07900 PF03741 Integral membrane protein TerC family FY138_07910 PF00892 EamA-like transporter family FY138_07915 PF01810 LysE type translocator FY138_07925 PF01177 Asp/Glu/Hydantoin racemase FY138_07930 PF00588 SpoU rRNA Methylase family FY138_07940 PF00180 Isocitrate/isopropylmalate dehydrogenase FY138_07950 PF02272 DHHA1 domain FY138_07950 PF01411 tRNA synthetases class II (A) FY138_07950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY138_07955 PF00154 recA bacterial DNA recombination protein FY138_07960 PF00294 pfkB family carbohydrate kinase FY138_07965 PF04227 Indigoidine synthase A like protein FY138_07970 PF00691 OmpA family FY138_07970 PF01389 OmpA-like transmembrane domain FY138_07975 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_07980 PF00528 Binding-protein-dependent transport system inner membrane component FY138_07985 PF00528 Binding-protein-dependent transport system inner membrane component FY138_07990 PF06233 Usg-like family FY138_07995 PF08241 Methyltransferase domain FY138_08000 PF09084 NMT1/THI5 like FY138_08005 PF13404 AsnC-type helix-turn-helix domain FY138_08005 PF01037 Lrp/AsnC ligand binding domain FY138_08010 PF03167 Uracil DNA glycosylase superfamily FY138_08020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_08020 PF00989 PAS fold FY138_08020 PF00512 His Kinase A (phospho-acceptor) domain FY138_08025 PF01219 Prokaryotic diacylglycerol kinase FY138_08030 PF02277 Phosphoribosyltransferase FY138_08035 PF02654 Cobalamin-5-phosphate synthase FY138_08050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY138_08055 PF01061 ABC-2 type transporter FY138_08060 PF00005 ABC transporter FY138_08065 PF01925 Sulfite exporter TauE/SafE FY138_08075 PF08269 Cache domain FY138_08075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_08085 PF00004 ATPase family associated with various cellular activities (AAA) FY138_08085 PF16193 AAA C-terminal domain FY138_08085 PF12002 MgsA AAA+ ATPase C terminal FY138_08090 PF13180 PDZ domain FY138_08090 PF00595 PDZ domain FY138_08110 PF00920 Dehydratase family FY138_08115 PF00174 Oxidoreductase molybdopterin binding domain FY138_08120 PF01794 Ferric reductase like transmembrane component FY138_08130 PF05675 Protein of unknown function (DUF817) FY138_08135 PF01196 Ribosomal protein L17 FY138_08140 PF01000 RNA polymerase Rpb3/RpoA insert domain FY138_08140 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY138_08140 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY138_08145 PF00411 Ribosomal protein S11 FY138_08150 PF00416 Ribosomal protein S13/S18 FY138_08160 PF00344 SecY translocase FY138_08165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY138_08170 PF00327 Ribosomal protein L30p/L7e FY138_08175 PF00333 Ribosomal protein S5, N-terminal domain FY138_08175 PF03719 Ribosomal protein S5, C-terminal domain FY138_08180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY138_08185 PF00347 Ribosomal protein L6 FY138_08190 PF00410 Ribosomal protein S8 FY138_08195 PF00253 Ribosomal protein S14p/S29e FY138_08200 PF00281 Ribosomal protein L5 FY138_08200 PF00673 ribosomal L5P family C-terminus FY138_08205 PF00467 KOW motif FY138_08205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY138_08210 PF00238 Ribosomal protein L14p/L23e FY138_08215 PF00366 Ribosomal protein S17 FY138_08220 PF00831 Ribosomal L29 protein FY138_08225 PF00252 Ribosomal protein L16p/L10e FY138_08230 PF07650 KH domain FY138_08230 PF00189 Ribosomal protein S3, C-terminal domain FY138_08235 PF00237 Ribosomal protein L22p/L17e FY138_08240 PF00203 Ribosomal protein S19 FY138_08245 PF00181 Ribosomal Proteins L2, RNA binding domain FY138_08245 PF03947 Ribosomal Proteins L2, C-terminal domain FY138_08250 PF00276 Ribosomal protein L23 FY138_08255 PF00573 Ribosomal protein L4/L1 family FY138_08260 PF00297 Ribosomal protein L3 FY138_08265 PF00338 Ribosomal protein S10p/S20e FY138_08270 PF03144 Elongation factor Tu domain 2 FY138_08270 PF03143 Elongation factor Tu C-terminal domain FY138_08270 PF00009 Elongation factor Tu GTP binding domain FY138_08275 PF00679 Elongation factor G C-terminus FY138_08275 PF14492 Elongation Factor G, domain II FY138_08275 PF03764 Elongation factor G, domain IV FY138_08275 PF00009 Elongation factor Tu GTP binding domain FY138_08275 PF03144 Elongation factor Tu domain 2 FY138_08280 PF00177 Ribosomal protein S7p/S5e FY138_08285 PF00164 Ribosomal protein S12/S23 FY138_08305 PF05000 RNA polymerase Rpb1, domain 4 FY138_08305 PF04983 RNA polymerase Rpb1, domain 3 FY138_08305 PF04998 RNA polymerase Rpb1, domain 5 FY138_08305 PF00623 RNA polymerase Rpb1, domain 2 FY138_08305 PF04997 RNA polymerase Rpb1, domain 1 FY138_08310 PF00562 RNA polymerase Rpb2, domain 6 FY138_08310 PF10385 RNA polymerase beta subunit external 1 domain FY138_08310 PF04565 RNA polymerase Rpb2, domain 3 FY138_08310 PF04560 RNA polymerase Rpb2, domain 7 FY138_08310 PF04563 RNA polymerase beta subunit FY138_08310 PF04561 RNA polymerase Rpb2, domain 2 FY138_08315 PF00542 Ribosomal protein L7/L12 C-terminal domain FY138_08315 PF16320 Ribosomal protein L7/L12 dimerisation domain FY138_08320 PF00466 Ribosomal protein L10 FY138_08325 PF00687 Ribosomal protein L1p/L10e family FY138_08330 PF00298 Ribosomal protein L11, RNA binding domain FY138_08330 PF03946 Ribosomal protein L11, N-terminal domain FY138_08335 PF02357 Transcription termination factor nusG FY138_08335 PF00467 KOW motif FY138_08340 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY138_08350 PF02719 Polysaccharide biosynthesis protein FY138_08350 PF08485 Polysaccharide biosynthesis protein C-terminal FY138_08355 PF03144 Elongation factor Tu domain 2 FY138_08355 PF00009 Elongation factor Tu GTP binding domain FY138_08355 PF03143 Elongation factor Tu C-terminal domain FY138_08360 PF03741 Integral membrane protein TerC family FY138_08365 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY138_08385 PF00664 ABC transporter transmembrane region FY138_08385 PF00005 ABC transporter FY138_08425 PF04545 Sigma-70, region 4 FY138_08425 PF04542 Sigma-70 region 2 FY138_08435 PF02954 Bacterial regulatory protein, Fis family FY138_08435 PF00072 Response regulator receiver domain FY138_08435 PF00158 Sigma-54 interaction domain FY138_08440 PF00072 Response regulator receiver domain FY138_08440 PF08769 Sporulation initiation factor Spo0A C terminal FY138_08445 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_08445 PF00072 Response regulator receiver domain FY138_08445 PF01627 Hpt domain FY138_08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_08445 PF00512 His Kinase A (phospho-acceptor) domain FY138_08450 PF00072 Response regulator receiver domain FY138_08455 PF07536 HWE histidine kinase FY138_08455 PF08447 PAS fold FY138_08455 PF13426 PAS domain FY138_08460 PF00072 Response regulator receiver domain FY138_08465 PF00360 Phytochrome region FY138_08465 PF01590 GAF domain FY138_08465 PF08446 PAS fold FY138_08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_08465 PF00512 His Kinase A (phospho-acceptor) domain FY138_08480 PF00588 SpoU rRNA Methylase family FY138_08480 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY138_08485 PF03061 Thioesterase superfamily FY138_08505 PF13460 NAD(P)H-binding FY138_08510 PF01638 HxlR-like helix-turn-helix FY138_08525 PF04851 Type III restriction enzyme, res subunit FY138_08525 PF12344 Ultra-violet resistance protein B FY138_08525 PF02151 UvrB/uvrC motif FY138_08525 PF00271 Helicase conserved C-terminal domain FY138_08525 PF17757 UvrB interaction domain FY138_08535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY138_08535 PF00756 Putative esterase FY138_08555 PF00684 DnaJ central domain FY138_08555 PF01556 DnaJ C terminal domain FY138_08555 PF00226 DnaJ domain FY138_08575 PF00990 Diguanylate cyclase, GGDEF domain FY138_08575 PF17151 Periplasmic sensor domain FY138_08585 PF00005 ABC transporter FY138_08585 PF08402 TOBE domain FY138_08595 PF01547 Bacterial extracellular solute-binding protein FY138_08600 PF00155 Aminotransferase class I and II FY138_08605 PF05025 RbsD / FucU transport protein family FY138_08615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY138_08615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY138_08620 PF00440 Bacterial regulatory proteins, tetR family FY138_08625 PF06719 AraC-type transcriptional regulator N-terminus FY138_08625 PF12833 Helix-turn-helix domain FY138_08630 PF00107 Zinc-binding dehydrogenase FY138_08630 PF08240 Alcohol dehydrogenase GroES-like domain FY138_08635 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_08640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY138_08645 PF00196 Bacterial regulatory proteins, luxR family FY138_08645 PF03472 Autoinducer binding domain FY138_08650 PF14490 Helix-hairpin-helix containing domain FY138_08650 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY138_08650 PF13538 UvrD-like helicase C-terminal domain FY138_08670 PF04542 Sigma-70 region 2 FY138_08670 PF08281 Sigma-70, region 4 FY138_08685 PF00248 Aldo/keto reductase family FY138_08700 PF10369 Small subunit of acetolactate synthase FY138_08705 PF00205 Thiamine pyrophosphate enzyme, central domain FY138_08705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY138_08705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY138_08725 PF13302 Acetyltransferase (GNAT) domain FY138_08735 PF13180 PDZ domain FY138_08740 PF01145 SPFH domain / Band 7 family FY138_08745 PF01145 SPFH domain / Band 7 family FY138_08750 PF00186 Dihydrofolate reductase FY138_08755 PF00303 Thymidylate synthase FY138_08790 PF02913 FAD linked oxidases, C-terminal domain FY138_08790 PF01565 FAD binding domain FY138_08795 PF00873 AcrB/AcrD/AcrF family FY138_08800 PF13533 Biotin-lipoyl like FY138_08810 PF13361 UvrD-like helicase C-terminal domain FY138_08810 PF00580 UvrD/REP helicase N-terminal domain FY138_08835 PF00857 Isochorismatase family FY138_08855 PF01321 Creatinase/Prolidase N-terminal domain FY138_08855 PF00557 Metallopeptidase family M24 FY138_08865 PF02630 SCO1/SenC FY138_08875 PF01584 CheW-like domain FY138_08885 PF00929 Exonuclease FY138_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_08890 PF03466 LysR substrate binding domain FY138_08900 PF00583 Acetyltransferase (GNAT) family FY138_08905 PF01636 Phosphotransferase enzyme family FY138_08910 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY138_08910 PF03120 NAD-dependent DNA ligase OB-fold domain FY138_08910 PF01653 NAD-dependent DNA ligase adenylation domain FY138_08910 PF00533 BRCA1 C Terminus (BRCT) domain FY138_08910 PF12826 Helix-hairpin-helix motif FY138_08915 PF02463 RecF/RecN/SMC N terminal domain FY138_08920 PF13525 Outer membrane lipoprotein FY138_08925 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY138_08930 PF12327 FtsZ family, C-terminal domain FY138_08930 PF00091 Tubulin/FtsZ family, GTPase domain FY138_08935 PF02491 SHS2 domain inserted in FTSA FY138_08940 PF03799 Cell division protein FtsQ FY138_08940 PF08478 POTRA domain, FtsQ-type FY138_08945 PF07478 D-ala D-ala ligase C-terminus FY138_08945 PF01820 D-ala D-ala ligase N-terminus FY138_08950 PF07690 Major Facilitator Superfamily FY138_08950 PF00083 Sugar (and other) transporter FY138_08955 PF00563 EAL domain FY138_08955 PF00990 Diguanylate cyclase, GGDEF domain FY138_08960 PF01565 FAD binding domain FY138_08960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY138_08965 PF08245 Mur ligase middle domain FY138_08965 PF01225 Mur ligase family, catalytic domain FY138_08965 PF02875 Mur ligase family, glutamate ligase domain FY138_08970 PF04101 Glycosyltransferase family 28 C-terminal domain FY138_08970 PF03033 Glycosyltransferase family 28 N-terminal domain FY138_08975 PF01098 Cell cycle protein FY138_08980 PF02875 Mur ligase family, glutamate ligase domain FY138_08980 PF08245 Mur ligase middle domain FY138_08985 PF00953 Glycosyl transferase family 4 FY138_08985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY138_08990 PF08245 Mur ligase middle domain FY138_08990 PF01225 Mur ligase family, catalytic domain FY138_08990 PF02875 Mur ligase family, glutamate ligase domain FY138_08995 PF01225 Mur ligase family, catalytic domain FY138_08995 PF02875 Mur ligase family, glutamate ligase domain FY138_08995 PF08245 Mur ligase middle domain FY138_09000 PF03717 Penicillin-binding Protein dimerisation domain FY138_09000 PF00905 Penicillin binding protein transpeptidase domain FY138_09010 PF01795 MraW methylase family FY138_09015 PF02381 MraZ protein, putative antitoxin-like FY138_09040 PF01510 N-acetylmuramoyl-L-alanine amidase FY138_09045 PF00226 DnaJ domain FY138_09045 PF05099 Tellurite resistance protein TerB FY138_09050 PF00365 Phosphofructokinase FY138_09070 PF13649 Methyltransferase domain FY138_09075 PF01183 Glycosyl hydrolases family 25 FY138_09085 PF02219 Methylenetetrahydrofolate reductase FY138_09090 PF01209 ubiE/COQ5 methyltransferase family FY138_09095 PF12848 ABC transporter FY138_09095 PF00005 ABC transporter FY138_09100 PF12146 Serine aminopeptidase, S33 FY138_09105 PF02515 CoA-transferase family III FY138_09110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY138_09110 PF00205 Thiamine pyrophosphate enzyme, central domain FY138_09110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY138_09120 PF01042 Endoribonuclease L-PSP FY138_09135 PF03734 L,D-transpeptidase catalytic domain FY138_09135 PF01476 LysM domain FY138_09140 PF07690 Major Facilitator Superfamily FY138_09160 PF10609 NUBPL iron-transfer P-loop NTPase FY138_09165 PF00465 Iron-containing alcohol dehydrogenase FY138_09170 PF00171 Aldehyde dehydrogenase family FY138_09175 PF00120 Glutamine synthetase, catalytic domain FY138_09175 PF03951 Glutamine synthetase, beta-Grasp domain FY138_09180 PF13520 Amino acid permease FY138_09190 PF01418 Helix-turn-helix domain, rpiR family FY138_09190 PF01380 SIS domain FY138_09195 PF13416 Bacterial extracellular solute-binding protein FY138_09210 PF00005 ABC transporter FY138_09210 PF08402 TOBE domain FY138_09215 PF08240 Alcohol dehydrogenase GroES-like domain FY138_09215 PF00107 Zinc-binding dehydrogenase FY138_09230 PF07690 Major Facilitator Superfamily FY138_09235 PF02310 B12 binding domain FY138_09235 PF02607 B12 binding domain FY138_09235 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY138_09235 PF00809 Pterin binding enzyme FY138_09235 PF02574 Homocysteine S-methyltransferase FY138_09255 PF13505 Outer membrane protein beta-barrel domain FY138_09270 PF04402 Protein of unknown function (DUF541) FY138_09280 PF01894 Uncharacterised protein family UPF0047 FY138_09285 PF00512 His Kinase A (phospho-acceptor) domain FY138_09285 PF08446 PAS fold FY138_09285 PF00360 Phytochrome region FY138_09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_09285 PF01590 GAF domain FY138_09295 PF04546 Sigma-70, non-essential region FY138_09295 PF03979 Sigma-70 factor, region 1.1 FY138_09295 PF00140 Sigma-70 factor, region 1.2 FY138_09295 PF04542 Sigma-70 region 2 FY138_09295 PF04539 Sigma-70 region 3 FY138_09295 PF04545 Sigma-70, region 4 FY138_09300 PF01807 CHC2 zinc finger FY138_09300 PF08275 DNA primase catalytic core, N-terminal domain FY138_09300 PF10410 DnaB-helicase binding domain of primase FY138_09300 PF08278 DNA primase DnaG DnaB-binding FY138_09320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY138_09320 PF00117 Glutamine amidotransferase class-I FY138_09325 PF01554 MatE FY138_09330 PF02743 Cache domain FY138_09330 PF00672 HAMP domain FY138_09330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_09340 PF04228 Putative neutral zinc metallopeptidase FY138_09355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_09355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY138_09355 PF02142 MGS-like domain FY138_09365 PF07694 5TMR of 5TMR-LYT FY138_09365 PF00990 Diguanylate cyclase, GGDEF domain FY138_09380 PF01272 Transcription elongation factor, GreA/GreB, C-term FY138_09380 PF03449 Transcription elongation factor, N-terminal FY138_09385 PF00534 Glycosyl transferases group 1 FY138_09390 PF01037 Lrp/AsnC ligand binding domain FY138_09395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_09400 PF03466 LysR substrate binding domain FY138_09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_09410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY138_09425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_09425 PF03466 LysR substrate binding domain FY138_09435 PF01699 Sodium/calcium exchanger protein FY138_09440 PF00155 Aminotransferase class I and II FY138_09445 PF05231 MASE1 FY138_09445 PF00563 EAL domain FY138_09460 PF00313 'Cold-shock' DNA-binding domain FY138_09465 PF00753 Metallo-beta-lactamase superfamily FY138_09475 PF12802 MarR family FY138_09480 PF00486 Transcriptional regulatory protein, C terminal FY138_09480 PF00072 Response regulator receiver domain FY138_09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_09485 PF00512 His Kinase A (phospho-acceptor) domain FY138_09485 PF00672 HAMP domain FY138_09490 PF01588 Putative tRNA binding domain FY138_09495 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY138_09495 PF03807 NADP oxidoreductase coenzyme F420-dependent FY138_09510 PF01790 Prolipoprotein diacylglyceryl transferase FY138_09520 PF02578 Multi-copper polyphenol oxidoreductase laccase FY138_09535 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY138_09535 PF14572 Phosphoribosyl synthetase-associated domain FY138_09545 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY138_09555 PF00535 Glycosyl transferase family 2 FY138_09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_09560 PF00672 HAMP domain FY138_09565 PF00171 Aldehyde dehydrogenase family FY138_09570 PF02954 Bacterial regulatory protein, Fis family FY138_09575 PF00990 Diguanylate cyclase, GGDEF domain FY138_09575 PF03707 Bacterial signalling protein N terminal repeat FY138_09575 PF00563 EAL domain FY138_09575 PF13188 PAS domain FY138_09580 PF01386 Ribosomal L25p family FY138_09580 PF14693 Ribosomal protein TL5, C-terminal domain FY138_09585 PF00563 EAL domain FY138_09585 PF00990 Diguanylate cyclase, GGDEF domain FY138_09585 PF08447 PAS fold FY138_09585 PF08448 PAS fold FY138_09595 PF01195 Peptidyl-tRNA hydrolase FY138_09605 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY138_09610 PF06071 Protein of unknown function (DUF933) FY138_09610 PF01926 50S ribosome-binding GTPase FY138_09630 PF00156 Phosphoribosyl transferase domain FY138_09640 PF02167 Cytochrome C1 family FY138_09640 PF00033 Cytochrome b/b6/petB FY138_09640 PF00032 Cytochrome b(C-terminal)/b6/petD FY138_09645 PF00032 Cytochrome b(C-terminal)/b6/petD FY138_09645 PF00033 Cytochrome b/b6/petB FY138_09650 PF00355 Rieske [2Fe-2S] domain FY138_09650 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY138_09660 PF00005 ABC transporter FY138_09660 PF00664 ABC transporter transmembrane region FY138_09670 PF00664 ABC transporter transmembrane region FY138_09670 PF00005 ABC transporter FY138_09680 PF00588 SpoU rRNA Methylase family FY138_09685 PF02690 Na+/Pi-cotransporter FY138_09695 PF01218 Coproporphyrinogen III oxidase FY138_09710 PF13735 tRNA nucleotidyltransferase domain 2 putative FY138_09710 PF01743 Poly A polymerase head domain FY138_09710 PF12627 Probable RNA and SrmB- binding site of polymerase A FY138_09715 PF00293 NUDIX domain FY138_09725 PF07726 ATPase family associated with various cellular activities (AAA) FY138_09725 PF17863 AAA lid domain FY138_09745 PF00583 Acetyltransferase (GNAT) family FY138_09750 PF03466 LysR substrate binding domain FY138_09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_09760 PF07690 Major Facilitator Superfamily FY138_09770 PF13409 Glutathione S-transferase, N-terminal domain FY138_09775 PF00293 NUDIX domain FY138_09785 PF00682 HMGL-like FY138_09785 PF08502 LeuA allosteric (dimerisation) domain FY138_09790 PF03594 Benzoate membrane transport protein FY138_09805 PF04542 Sigma-70 region 2 FY138_09805 PF04545 Sigma-70, region 4 FY138_09815 PF00574 Clp protease FY138_09820 PF04955 HupE / UreJ protein FY138_09830 PF14489 QueF-like protein FY138_09835 PF01545 Cation efflux family FY138_09835 PF16916 Dimerisation domain of Zinc Transporter FY138_09845 PF13458 Periplasmic binding protein FY138_09855 PF01022 Bacterial regulatory protein, arsR family FY138_09860 PF00571 CBS domain FY138_09860 PF00005 ABC transporter FY138_09865 PF00528 Binding-protein-dependent transport system inner membrane component FY138_09870 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY138_09880 PF00265 Thymidine kinase FY138_09885 PF00127 Copper binding proteins, plastocyanin/azurin family FY138_09895 PF03472 Autoinducer binding domain FY138_09895 PF00196 Bacterial regulatory proteins, luxR family FY138_09900 PF03350 Uncharacterized protein family, UPF0114 FY138_09905 PF07715 TonB-dependent Receptor Plug Domain FY138_09905 PF04886 PT repeat FY138_09905 PF00593 TonB dependent receptor FY138_09915 PF04715 Anthranilate synthase component I, N terminal region FY138_09915 PF00425 chorismate binding enzyme FY138_09915 PF00117 Glutamine amidotransferase class-I FY138_09925 PF11871 Domain of unknown function (DUF3391) FY138_09925 PF01966 HD domain FY138_09930 PF01979 Amidohydrolase family FY138_09930 PF13382 Adenine deaminase C-terminal domain FY138_09935 PF00583 Acetyltransferase (GNAT) family FY138_09940 PF00128 Alpha amylase, catalytic domain FY138_09945 PF00294 pfkB family carbohydrate kinase FY138_09965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY138_09965 PF01926 50S ribosome-binding GTPase FY138_09985 PF05992 SbmA/BacA-like family FY138_09995 PF00557 Metallopeptidase family M24 FY138_10010 PF00111 2Fe-2S iron-sulfur cluster binding domain FY138_10010 PF01799 [2Fe-2S] binding domain FY138_10015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY138_10015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY138_10025 PF03466 LysR substrate binding domain FY138_10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10040 PF01979 Amidohydrolase family FY138_10050 PF01070 FMN-dependent dehydrogenase FY138_10055 PF00893 Small Multidrug Resistance protein FY138_10060 PF17932 Tetracyclin repressor-like, C-terminal domain FY138_10060 PF00440 Bacterial regulatory proteins, tetR family FY138_10065 PF00768 D-alanyl-D-alanine carboxypeptidase FY138_10065 PF07943 Penicillin-binding protein 5, C-terminal domain FY138_10075 PF00576 HIUase/Transthyretin family FY138_10080 PF04115 Ureidoglycolate lyase FY138_10095 PF09349 OHCU decarboxylase FY138_10095 PF01014 Uricase FY138_10105 PF06299 Protein of unknown function (DUF1045) FY138_10110 PF01266 FAD dependent oxidoreductase FY138_10115 PF01266 FAD dependent oxidoreductase FY138_10115 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY138_10120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_10120 PF00672 HAMP domain FY138_10120 PF00512 His Kinase A (phospho-acceptor) domain FY138_10120 PF01627 Hpt domain FY138_10120 PF00072 Response regulator receiver domain FY138_10120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY138_10125 PF00270 DEAD/DEAH box helicase FY138_10125 PF00271 Helicase conserved C-terminal domain FY138_10135 PF07681 DoxX FY138_10140 PF03734 L,D-transpeptidase catalytic domain FY138_10140 PF01476 LysM domain FY138_10150 PF14403 Circularly permuted ATP-grasp type 2 FY138_10160 PF08379 Bacterial transglutaminase-like N-terminal region FY138_10160 PF01841 Transglutaminase-like superfamily FY138_10185 PF02653 Branched-chain amino acid transport system / permease component FY138_10190 PF00005 ABC transporter FY138_10195 PF13407 Periplasmic binding protein domain FY138_10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10200 PF03466 LysR substrate binding domain FY138_10250 PF03743 Bacterial conjugation TrbI-like protein FY138_10260 PF04335 VirB8 protein FY138_10265 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY138_10280 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY138_10295 PF00437 Type II/IV secretion system protein FY138_10305 PF02534 Type IV secretory system Conjugative DNA transfer FY138_10315 PF01381 Helix-turn-helix FY138_10320 PF03466 LysR substrate binding domain FY138_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10325 PF02321 Outer membrane efflux protein FY138_10330 PF13533 Biotin-lipoyl like FY138_10345 PF02311 AraC-like ligand binding domain FY138_10345 PF12833 Helix-turn-helix domain FY138_10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10360 PF03466 LysR substrate binding domain FY138_10370 PF00753 Metallo-beta-lactamase superfamily FY138_10370 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY138_10370 PF10996 Beta-Casp domain FY138_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10385 PF03466 LysR substrate binding domain FY138_10395 PF01464 Transglycosylase SLT domain FY138_10420 PF13614 AAA domain FY138_10440 PF06067 Domain of unknown function (DUF932) FY138_10455 PF07690 Major Facilitator Superfamily FY138_10460 PF03466 LysR substrate binding domain FY138_10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10465 PF05284 Protein of unknown function (DUF736) FY138_10480 PF02463 RecF/RecN/SMC N terminal domain FY138_10510 PF00271 Helicase conserved C-terminal domain FY138_10525 PF00271 Helicase conserved C-terminal domain FY138_10525 PF16124 RecQ zinc-binding FY138_10525 PF09382 RQC domain FY138_10525 PF00270 DEAD/DEAH box helicase FY138_10525 PF00570 HRDC domain FY138_10530 PF13784 Fic/DOC family N-terminal FY138_10530 PF02661 Fic/DOC family FY138_10545 PF03358 NADPH-dependent FMN reductase FY138_10550 PF00561 alpha/beta hydrolase fold FY138_10570 PF13533 Biotin-lipoyl like FY138_10575 PF03466 LysR substrate binding domain FY138_10575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY138_10585 PF03466 LysR substrate binding domain FY138_10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10600 PF00857 Isochorismatase family FY138_10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_10605 PF03466 LysR substrate binding domain FY138_10610 PF00004 ATPase family associated with various cellular activities (AAA) FY138_10610 PF01434 Peptidase family M41 FY138_10610 PF17862 AAA+ lid domain FY138_10620 PF00665 Integrase core domain FY138_10625 PF01695 IstB-like ATP binding protein FY138_10635 PF00672 HAMP domain FY138_10635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_10640 PF07690 Major Facilitator Superfamily FY138_10650 PF00809 Pterin binding enzyme FY138_10650 PF02310 B12 binding domain FY138_10650 PF02574 Homocysteine S-methyltransferase FY138_10650 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY138_10650 PF02607 B12 binding domain FY138_10655 PF00528 Binding-protein-dependent transport system inner membrane component FY138_10660 PF00528 Binding-protein-dependent transport system inner membrane component FY138_10665 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_10670 PF00005 ABC transporter FY138_10690 PF00331 Glycosyl hydrolase family 10 FY138_10695 PF00535 Glycosyl transferase family 2 FY138_10710 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY138_10725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY138_10725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY138_10725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY138_10725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY138_10740 PF01152 Bacterial-like globin FY138_10760 PF08362 YcdC-like protein, C-terminal region FY138_10760 PF00440 Bacterial regulatory proteins, tetR family FY138_10765 PF01546 Peptidase family M20/M25/M40 FY138_10765 PF07687 Peptidase dimerisation domain FY138_10770 PF01979 Amidohydrolase family FY138_10775 PF00293 NUDIX domain FY138_10780 PF00005 ABC transporter FY138_10785 PF00528 Binding-protein-dependent transport system inner membrane component FY138_10790 PF00528 Binding-protein-dependent transport system inner membrane component FY138_10805 PF00873 AcrB/AcrD/AcrF family FY138_10820 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY138_10825 PF01730 UreF FY138_10830 PF02814 UreE urease accessory protein, N-terminal domain FY138_10830 PF05194 UreE urease accessory protein, C-terminal domain FY138_10835 PF08534 Redoxin FY138_10845 PF00449 Urease alpha-subunit, N-terminal domain FY138_10845 PF01979 Amidohydrolase family FY138_10855 PF07007 Lysozyme inhibitor LprI FY138_10865 PF00699 Urease beta subunit FY138_10870 PF06906 Protein of unknown function (DUF1272) FY138_10875 PF00547 Urease, gamma subunit FY138_10880 PF01774 UreD urease accessory protein FY138_10890 PF00005 ABC transporter FY138_10900 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_10900 PF00005 ABC transporter FY138_10910 PF02653 Branched-chain amino acid transport system / permease component FY138_10920 PF10931 Protein of unknown function (DUF2735) FY138_10925 PF03951 Glutamine synthetase, beta-Grasp domain FY138_10925 PF00120 Glutamine synthetase, catalytic domain FY138_10935 PF00072 Response regulator receiver domain FY138_10935 PF00989 PAS fold FY138_10935 PF01627 Hpt domain FY138_10935 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY138_10935 PF00512 His Kinase A (phospho-acceptor) domain FY138_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_10940 PF00072 Response regulator receiver domain FY138_10950 PF01522 Polysaccharide deacetylase FY138_10950 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY138_10955 PF13458 Periplasmic binding protein FY138_10965 PF00005 ABC transporter FY138_10970 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_10970 PF00005 ABC transporter FY138_10975 PF11862 Domain of unknown function (DUF3382) FY138_10975 PF02653 Branched-chain amino acid transport system / permease component FY138_10980 PF02653 Branched-chain amino acid transport system / permease component FY138_10985 PF00459 Inositol monophosphatase family FY138_11015 PF00072 Response regulator receiver domain FY138_11015 PF00486 Transcriptional regulatory protein, C terminal FY138_11035 PF10090 Histidine phosphotransferase C-terminal domain FY138_11050 PF00588 SpoU rRNA Methylase family FY138_11060 PF00849 RNA pseudouridylate synthase FY138_11070 PF00140 Sigma-70 factor, region 1.2 FY138_11070 PF04542 Sigma-70 region 2 FY138_11070 PF04545 Sigma-70, region 4 FY138_11080 PF00709 Adenylosuccinate synthetase FY138_11105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_11115 PF03167 Uracil DNA glycosylase superfamily FY138_11120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_11125 PF04304 Protein of unknown function (DUF454) FY138_11130 PF00005 ABC transporter FY138_11135 PF01032 FecCD transport family FY138_11140 PF01497 Periplasmic binding protein FY138_11150 PF06228 Haem utilisation ChuX/HutX FY138_11165 PF13443 Cro/C1-type HTH DNA-binding domain FY138_11175 PF00551 Formyl transferase FY138_11190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_11190 PF00512 His Kinase A (phospho-acceptor) domain FY138_11190 PF00672 HAMP domain FY138_11195 PF00072 Response regulator receiver domain FY138_11195 PF00486 Transcriptional regulatory protein, C terminal FY138_11205 PF03401 Tripartite tricarboxylate transporter family receptor FY138_11215 PF01970 Tripartite tricarboxylate transporter TctA family FY138_11230 PF01032 FecCD transport family FY138_11235 PF01032 FecCD transport family FY138_11240 PF00005 ABC transporter FY138_11245 PF00210 Ferritin-like domain FY138_11260 PF00672 HAMP domain FY138_11260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_11265 PF00248 Aldo/keto reductase family FY138_11270 PF07690 Major Facilitator Superfamily FY138_11275 PF03466 LysR substrate binding domain FY138_11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_11280 PF03466 LysR substrate binding domain FY138_11285 PF07859 alpha/beta hydrolase fold FY138_11290 PF13533 Biotin-lipoyl like FY138_11295 PF00873 AcrB/AcrD/AcrF family FY138_11310 PF13091 PLD-like domain FY138_11310 PF13396 Phospholipase_D-nuclease N-terminal FY138_11315 PF08543 Phosphomethylpyrimidine kinase FY138_11320 PF00484 Carbonic anhydrase FY138_11330 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY138_11330 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY138_11340 PF00083 Sugar (and other) transporter FY138_11345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY138_11345 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY138_11345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY138_11350 PF02233 NAD(P) transhydrogenase beta subunit FY138_11355 PF01613 Flavin reductase like domain FY138_11360 PF00881 Nitroreductase family FY138_11365 PF00561 alpha/beta hydrolase fold FY138_11370 PF01042 Endoribonuclease L-PSP FY138_11375 PF00857 Isochorismatase family FY138_11380 PF00296 Luciferase-like monooxygenase FY138_11385 PF01126 Heme oxygenase FY138_11390 PF00701 Dihydrodipicolinate synthetase family FY138_11395 PF07729 FCD domain FY138_11395 PF00392 Bacterial regulatory proteins, gntR family FY138_11405 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11410 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11415 PF03459 TOBE domain FY138_11415 PF17912 MalK OB fold domain FY138_11415 PF00005 ABC transporter FY138_11420 PF00294 pfkB family carbohydrate kinase FY138_11425 PF03576 Peptidase family S58 FY138_11430 PF01063 Amino-transferase class IV FY138_11435 PF03466 LysR substrate binding domain FY138_11435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_11440 PF00144 Beta-lactamase FY138_11445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_11445 PF00005 ABC transporter FY138_11450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_11450 PF00005 ABC transporter FY138_11455 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_11455 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11460 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_11470 PF01244 Membrane dipeptidase (Peptidase family M19) FY138_11480 PF03706 Lysylphosphatidylglycerol synthase TM region FY138_11480 PF09924 Uncharacterised conserved protein (DUF2156) FY138_11495 PF07690 Major Facilitator Superfamily FY138_11505 PF04444 Catechol dioxygenase N terminus FY138_11505 PF00775 Dioxygenase FY138_11510 PF00465 Iron-containing alcohol dehydrogenase FY138_11515 PF04909 Amidohydrolase FY138_11520 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY138_11520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_11525 PF01613 Flavin reductase like domain FY138_11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_11545 PF00512 His Kinase A (phospho-acceptor) domain FY138_11550 PF00486 Transcriptional regulatory protein, C terminal FY138_11550 PF00072 Response regulator receiver domain FY138_11560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY138_11565 PF08402 TOBE domain FY138_11565 PF00005 ABC transporter FY138_11570 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11585 PF00072 Response regulator receiver domain FY138_11585 PF00486 Transcriptional regulatory protein, C terminal FY138_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_11590 PF00512 His Kinase A (phospho-acceptor) domain FY138_11590 PF13188 PAS domain FY138_11590 PF00072 Response regulator receiver domain FY138_11590 PF08448 PAS fold FY138_11595 PF00202 Aminotransferase class-III FY138_11600 PF03466 LysR substrate binding domain FY138_11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_11605 PF00313 'Cold-shock' DNA-binding domain FY138_11645 PF01259 SAICAR synthetase FY138_11650 PF00440 Bacterial regulatory proteins, tetR family FY138_11655 PF00529 HlyD membrane-fusion protein of T1SS FY138_11655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_11660 PF00873 AcrB/AcrD/AcrF family FY138_11665 PF02321 Outer membrane efflux protein FY138_11670 PF01132 Elongation factor P (EF-P) OB domain FY138_11670 PF08207 Elongation factor P (EF-P) KOW-like domain FY138_11670 PF09285 Elongation factor P, C-terminal FY138_11675 PF00152 tRNA synthetases class II (D, K and N) FY138_11680 PF12544 Lysine-2,3-aminomutase FY138_11680 PF04055 Radical SAM superfamily FY138_11695 PF03466 LysR substrate binding domain FY138_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_11700 PF01266 FAD dependent oxidoreductase FY138_11710 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11715 PF00005 ABC transporter FY138_11715 PF03459 TOBE domain FY138_11725 PF03576 Peptidase family S58 FY138_11730 PF05690 Thiazole biosynthesis protein ThiG FY138_11740 PF01266 FAD dependent oxidoreductase FY138_11745 PF01964 Radical SAM ThiC family FY138_11745 PF13667 ThiC-associated domain FY138_11755 PF00550 Phosphopantetheine attachment site FY138_11785 PF00005 ABC transporter FY138_11785 PF00664 ABC transporter transmembrane region FY138_11790 PF13545 Crp-like helix-turn-helix domain FY138_11790 PF00027 Cyclic nucleotide-binding domain FY138_11800 PF00211 Adenylate and Guanylate cyclase catalytic domain FY138_11800 PF00672 HAMP domain FY138_11810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY138_11810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY138_11810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY138_11815 PF00534 Glycosyl transferases group 1 FY138_11815 PF13439 Glycosyltransferase Family 4 FY138_11830 PF00005 ABC transporter FY138_11830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_11835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_11840 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11845 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11845 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_11860 PF03033 Glycosyltransferase family 28 N-terminal domain FY138_11860 PF04101 Glycosyltransferase family 28 C-terminal domain FY138_11865 PF03932 CutC family FY138_11870 PF07690 Major Facilitator Superfamily FY138_11880 PF02838 Glycosyl hydrolase family 20, domain 2 FY138_11880 PF00728 Glycosyl hydrolase family 20, catalytic domain FY138_11890 PF01418 Helix-turn-helix domain, rpiR family FY138_11890 PF01380 SIS domain FY138_11900 PF00005 ABC transporter FY138_11900 PF17912 MalK OB fold domain FY138_11905 PF01547 Bacterial extracellular solute-binding protein FY138_11910 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11915 PF00528 Binding-protein-dependent transport system inner membrane component FY138_11930 PF00392 Bacterial regulatory proteins, gntR family FY138_11930 PF07702 UTRA domain FY138_11935 PF01380 SIS domain FY138_11940 PF01979 Amidohydrolase family FY138_11945 PF00480 ROK family FY138_11950 PF01494 FAD binding domain FY138_11955 PF01569 PAP2 superfamily FY138_11960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY138_11960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY138_11960 PF13288 DXP reductoisomerase C-terminal domain FY138_11965 PF00155 Aminotransferase class I and II FY138_11975 PF01103 Surface antigen FY138_11975 PF17243 POTRA domain TamA domain 1 FY138_11975 PF07244 Surface antigen variable number repeat FY138_11985 PF01584 CheW-like domain FY138_11990 PF13426 PAS domain FY138_11990 PF08447 PAS fold FY138_11990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_11995 PF02634 FdhD/NarQ family FY138_12000 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY138_12005 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY138_12005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY138_12010 PF00231 ATP synthase FY138_12015 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY138_12015 PF00306 ATP synthase alpha/beta chain, C terminal domain FY138_12015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY138_12020 PF00213 ATP synthase delta (OSCP) subunit FY138_12030 PF00270 DEAD/DEAH box helicase FY138_12030 PF17764 3′ DNA-binding domain (3′BD) FY138_12030 PF18074 Primosomal protein N C-terminal domain FY138_12030 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY138_12035 PF02899 Phage integrase, N-terminal SAM-like domain FY138_12035 PF00589 Phage integrase family FY138_12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_12055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY138_12060 PF01810 LysE type translocator FY138_12070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY138_12070 PF00364 Biotin-requiring enzyme FY138_12070 PF02817 e3 binding domain FY138_12075 PF16870 2-oxoglutarate dehydrogenase C-terminal FY138_12075 PF02779 Transketolase, pyrimidine binding domain FY138_12075 PF16078 2-oxoglutarate dehydrogenase N-terminus FY138_12075 PF00676 Dehydrogenase E1 component FY138_12080 PF02629 CoA binding domain FY138_12080 PF00549 CoA-ligase FY138_12085 PF08442 ATP-grasp domain FY138_12085 PF00549 CoA-ligase FY138_12090 PF00056 lactate/malate dehydrogenase, NAD binding domain FY138_12090 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY138_12095 PF03969 AFG1-like ATPase FY138_12100 PF02974 Protease inhibitor Inh FY138_12105 PF13085 2Fe-2S iron-sulfur cluster binding domain FY138_12105 PF13237 4Fe-4S dicluster domain FY138_12110 PF02910 Fumarate reductase flavoprotein C-term FY138_12110 PF00890 FAD binding domain FY138_12120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY138_12145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY138_12145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY138_12150 PF00814 Glycoprotease family FY138_12155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY138_12155 PF03900 Porphobilinogen deaminase, C-terminal domain FY138_12180 PF00117 Glutamine amidotransferase class-I FY138_12190 PF02325 YGGT family FY138_12195 PF02594 Uncharacterised ACR, YggU family COG1872 FY138_12200 PF00719 Inorganic pyrophosphatase FY138_12210 PF00679 Elongation factor G C-terminus FY138_12210 PF00009 Elongation factor Tu GTP binding domain FY138_12210 PF03144 Elongation factor Tu domain 2 FY138_12215 PF01432 Peptidase family M3 FY138_12220 PF01047 MarR family FY138_12225 PF07690 Major Facilitator Superfamily FY138_12230 PF00764 Arginosuccinate synthase FY138_12235 PF00106 short chain dehydrogenase FY138_12240 PF01810 LysE type translocator FY138_12245 PF00005 ABC transporter FY138_12250 PF02653 Branched-chain amino acid transport system / permease component FY138_12260 PF04055 Radical SAM superfamily FY138_12275 PF01329 Pterin 4 alpha carbinolamine dehydratase FY138_12280 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY138_12285 PF02834 LigT like Phosphoesterase FY138_12290 PF13472 GDSL-like Lipase/Acylhydrolase family FY138_12295 PF00005 ABC transporter FY138_12305 PF01027 Inhibitor of apoptosis-promoting Bax1 FY138_12320 PF00330 Aconitase family (aconitate hydratase) FY138_12320 PF00694 Aconitase C-terminal domain FY138_12325 PF00005 ABC transporter FY138_12330 PF03379 CcmB protein FY138_12335 PF01578 Cytochrome C assembly protein FY138_12345 PF08534 Redoxin FY138_12350 PF00990 Diguanylate cyclase, GGDEF domain FY138_12355 PF10755 Protein of unknown function (DUF2585) FY138_12360 PF04279 Intracellular septation protein A FY138_12365 PF02881 SRP54-type protein, helical bundle domain FY138_12365 PF00448 SRP54-type protein, GTPase domain FY138_12370 PF00919 Uncharacterized protein family UPF0004 FY138_12370 PF04055 Radical SAM superfamily FY138_12375 PF01678 Diaminopimelate epimerase FY138_12380 PF12706 Beta-lactamase superfamily domain FY138_12390 PF00448 SRP54-type protein, GTPase domain FY138_12390 PF02881 SRP54-type protein, helical bundle domain FY138_12390 PF02978 Signal peptide binding domain FY138_12395 PF01817 Chorismate mutase type II FY138_12395 PF02153 Prephenate dehydrogenase FY138_12400 PF00886 Ribosomal protein S16 FY138_12405 PF01782 RimM N-terminal domain FY138_12405 PF05239 PRC-barrel domain FY138_12410 PF01746 tRNA (Guanine-1)-methyltransferase FY138_12420 PF01245 Ribosomal protein L19 FY138_12425 PF00664 ABC transporter transmembrane region FY138_12425 PF00005 ABC transporter FY138_12430 PF00529 HlyD membrane-fusion protein of T1SS FY138_12430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_12440 PF07690 Major Facilitator Superfamily FY138_12445 PF00330 Aconitase family (aconitate hydratase) FY138_12460 PF01435 Peptidase family M48 FY138_12465 PF00005 ABC transporter FY138_12470 PF00528 Binding-protein-dependent transport system inner membrane component FY138_12475 PF01547 Bacterial extracellular solute-binding protein FY138_12485 PF00005 ABC transporter FY138_12485 PF16326 ABC transporter C-terminal domain FY138_12495 PF04204 Homoserine O-succinyltransferase FY138_12500 PF01263 Aldose 1-epimerase FY138_12505 PF00912 Transglycosylase FY138_12510 PF00348 Polyprenyl synthetase FY138_12515 PF00691 OmpA family FY138_12515 PF13488 Glycine zipper FY138_12520 PF04551 GcpE protein FY138_12525 PF07690 Major Facilitator Superfamily FY138_12530 PF00455 DeoR C terminal sensor domain FY138_12530 PF08220 DeoR-like helix-turn-helix domain FY138_12535 PF00364 Biotin-requiring enzyme FY138_12535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_12535 PF00289 Biotin carboxylase, N-terminal domain FY138_12535 PF02436 Conserved carboxylase domain FY138_12535 PF00682 HMGL-like FY138_12535 PF02785 Biotin carboxylase C-terminal domain FY138_12540 PF00072 Response regulator receiver domain FY138_12540 PF00196 Bacterial regulatory proteins, luxR family FY138_12545 PF00664 ABC transporter transmembrane region FY138_12545 PF00005 ABC transporter FY138_12555 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY138_12555 PF06165 Glycosyltransferase family 36 FY138_12555 PF10091 Putative glucoamylase FY138_12560 PF07687 Peptidase dimerisation domain FY138_12560 PF01546 Peptidase family M20/M25/M40 FY138_12565 PF01266 FAD dependent oxidoreductase FY138_12570 PF00291 Pyridoxal-phosphate dependent enzyme FY138_12575 PF00920 Dehydratase family FY138_12580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY138_12580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY138_12585 PF01370 NAD dependent epimerase/dehydratase family FY138_12590 PF02913 FAD linked oxidases, C-terminal domain FY138_12590 PF01565 FAD binding domain FY138_12595 PF07729 FCD domain FY138_12595 PF00392 Bacterial regulatory proteins, gntR family FY138_12605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY138_12610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY138_12615 PF03480 Bacterial extracellular solute-binding protein, family 7 FY138_12620 PF16177 Acetyl-coenzyme A synthetase N-terminus FY138_12620 PF00501 AMP-binding enzyme FY138_12620 PF13193 AMP-binding enzyme C-terminal domain FY138_12630 PF01168 Alanine racemase, N-terminal domain FY138_12635 PF00133 tRNA synthetases class I (I, L, M and V) FY138_12635 PF13603 Leucyl-tRNA synthetase, Domain 2 FY138_12635 PF08264 Anticodon-binding domain of tRNA FY138_12650 PF00037 4Fe-4S binding domain FY138_12650 PF11953 Domain of unknown function (DUF3470) FY138_12655 PF00579 tRNA synthetases class I (W and Y) FY138_12655 PF01479 S4 domain FY138_12670 PF01494 FAD binding domain FY138_12680 PF00543 Nitrogen regulatory protein P-II FY138_12685 PF00909 Ammonium Transporter Family FY138_12690 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY138_12690 PF17854 FtsK alpha domain FY138_12690 PF09397 Ftsk gamma domain FY138_12690 PF01580 FtsK/SpoIIIE family FY138_12695 PF03548 Outer membrane lipoprotein carrier protein LolA FY138_12710 PF00072 Response regulator receiver domain FY138_12710 PF00486 Transcriptional regulatory protein, C terminal FY138_12720 PF02559 CarD-like/TRCF domain FY138_12725 PF05088 Bacterial NAD-glutamate dehydrogenase FY138_12730 PF11700 Vacuole effluxer Atg22 like FY138_12735 PF05233 PHB accumulation regulatory domain FY138_12735 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY138_12740 PF02803 Thiolase, C-terminal domain FY138_12740 PF00108 Thiolase, N-terminal domain FY138_12755 PF00210 Ferritin-like domain FY138_12760 PF00293 NUDIX domain FY138_12765 PF04748 Divergent polysaccharide deacetylase FY138_12770 PF03572 Peptidase family S41 FY138_12770 PF13180 PDZ domain FY138_12780 PF02590 Predicted SPOUT methyltransferase FY138_12790 PF01467 Cytidylyltransferase-like FY138_12795 PF00171 Aldehyde dehydrogenase family FY138_12800 PF01472 PUA domain FY138_12800 PF00696 Amino acid kinase family FY138_12805 PF01018 GTP1/OBG FY138_12805 PF01926 50S ribosome-binding GTPase FY138_12810 PF13302 Acetyltransferase (GNAT) domain FY138_12820 PF01016 Ribosomal L27 protein FY138_12825 PF00829 Ribosomal prokaryotic L21 protein FY138_12840 PF03328 HpcH/HpaI aldolase/citrate lyase family FY138_12850 PF00694 Aconitase C-terminal domain FY138_12855 PF00180 Isocitrate/isopropylmalate dehydrogenase FY138_12860 PF03150 Di-haem cytochrome c peroxidase FY138_12865 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY138_12865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY138_12870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_12875 PF01888 CbiD FY138_12880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_12890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_12895 PF02571 Precorrin-6x reductase CbiJ/CobK FY138_12900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_12905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_12910 PF02570 Precorrin-8X methylmutase FY138_12915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY138_12920 PF02514 CobN/Magnesium Chelatase FY138_12925 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY138_12925 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY138_12935 PF12557 Cob(I)alamin adenosyltransferase N terminal FY138_12935 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY138_12940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY138_12940 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY138_12945 PF03186 CobD/Cbib protein FY138_12950 PF00155 Aminotransferase class I and II FY138_12955 PF13378 Enolase C-terminal domain-like FY138_12955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_12960 PF05336 L-rhamnose mutarotase FY138_12965 PF01232 Mannitol dehydrogenase Rossmann domain FY138_12965 PF08125 Mannitol dehydrogenase C-terminal domain FY138_12970 PF08240 Alcohol dehydrogenase GroES-like domain FY138_12970 PF00107 Zinc-binding dehydrogenase FY138_12980 PF00248 Aldo/keto reductase family FY138_12990 PF02653 Branched-chain amino acid transport system / permease component FY138_12995 PF00005 ABC transporter FY138_13000 PF00392 Bacterial regulatory proteins, gntR family FY138_13000 PF07729 FCD domain FY138_13005 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY138_13005 PF08666 SAF domain FY138_13010 PF01808 AICARFT/IMPCHase bienzyme FY138_13010 PF02142 MGS-like domain FY138_13020 PF01189 16S rRNA methyltransferase RsmB/F FY138_13020 PF01029 NusB family FY138_13025 PF01435 Peptidase family M48 FY138_13035 PF17762 HTH domain found in ParB protein FY138_13035 PF02195 ParB-like nuclease domain FY138_13040 PF13614 AAA domain FY138_13045 PF02527 rRNA small subunit methyltransferase G FY138_13050 PF13932 GidA associated domain FY138_13050 PF01134 Glucose inhibited division protein A FY138_13055 PF01926 50S ribosome-binding GTPase FY138_13055 PF12631 MnmE helical domain FY138_13055 PF10396 GTP-binding protein TrmE N-terminus FY138_13060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY138_13060 PF07498 Rho termination factor, N-terminal domain FY138_13060 PF07497 Rho termination factor, RNA-binding domain FY138_13065 PF03653 Uncharacterised protein family (UPF0093) FY138_13070 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY138_13075 PF03618 Kinase/pyrophosphorylase FY138_13080 PF02545 Maf-like protein FY138_13085 PF08501 Shikimate dehydrogenase substrate binding domain FY138_13085 PF01488 Shikimate / quinate 5-dehydrogenase FY138_13085 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY138_13090 PF01121 Dephospho-CoA kinase FY138_13095 PF00929 Exonuclease FY138_13100 PF02556 Preprotein translocase subunit SecB FY138_13105 PF04186 FxsA cytoplasmic membrane protein FY138_13115 PF06725 3D domain FY138_13115 PF03562 MltA specific insert domain FY138_13130 PF00204 DNA gyrase B FY138_13130 PF00986 DNA gyrase B subunit, carboxyl terminus FY138_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_13130 PF01751 Toprim domain FY138_13140 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY138_13155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY138_13160 PF00291 Pyridoxal-phosphate dependent enzyme FY138_13165 PF00290 Tryptophan synthase alpha chain FY138_13170 PF01039 Carboxyl transferase domain FY138_13175 PF08245 Mur ligase middle domain FY138_13175 PF02875 Mur ligase family, glutamate ligase domain FY138_13180 PF00085 Thioredoxin FY138_13185 PF12705 PD-(D/E)XK nuclease superfamily FY138_13185 PF00580 UvrD/REP helicase N-terminal domain FY138_13185 PF13361 UvrD-like helicase C-terminal domain FY138_13195 PF12804 MobA-like NTP transferase domain FY138_13200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY138_13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_13205 PF00512 His Kinase A (phospho-acceptor) domain FY138_13210 PF05221 S-adenosyl-L-homocysteine hydrolase FY138_13210 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY138_13215 PF00381 PTS HPr component phosphorylation site FY138_13220 PF03830 PTS system sorbose subfamily IIB component FY138_13220 PF03610 PTS system fructose IIA component FY138_13225 PF07475 HPr Serine kinase C-terminal domain FY138_13225 PF02603 HPr Serine kinase N terminus FY138_13230 PF00672 HAMP domain FY138_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_13230 PF00512 His Kinase A (phospho-acceptor) domain FY138_13230 PF13755 Sensor N-terminal transmembrane domain FY138_13230 PF13756 Stimulus-sensing domain FY138_13235 PF00072 Response regulator receiver domain FY138_13235 PF00486 Transcriptional regulatory protein, C terminal FY138_13240 PF01293 Phosphoenolpyruvate carboxykinase FY138_13245 PF00472 RF-1 domain FY138_13250 PF04972 BON domain FY138_13250 PF01476 LysM domain FY138_13255 PF00485 Phosphoribulokinase / Uridine kinase family FY138_13260 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY138_13265 PF00977 Histidine biosynthesis protein FY138_13270 PF00977 Histidine biosynthesis protein FY138_13275 PF00117 Glutamine amidotransferase class-I FY138_13285 PF00475 Imidazoleglycerol-phosphate dehydratase FY138_13290 PF00227 Proteasome subunit FY138_13295 PF00004 ATPase family associated with various cellular activities (AAA) FY138_13295 PF07724 AAA domain (Cdc48 subfamily) FY138_13295 PF10431 C-terminal, D2-small domain, of ClpB protein FY138_13305 PF01274 Malate synthase FY138_13320 PF00072 Response regulator receiver domain FY138_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_13325 PF00512 His Kinase A (phospho-acceptor) domain FY138_13330 PF00271 Helicase conserved C-terminal domain FY138_13330 PF08482 ATP-dependent helicase C-terminal FY138_13330 PF00270 DEAD/DEAH box helicase FY138_13330 PF04408 Helicase associated domain (HA2) FY138_13370 PF00570 HRDC domain FY138_13370 PF00270 DEAD/DEAH box helicase FY138_13370 PF00271 Helicase conserved C-terminal domain FY138_13370 PF16124 RecQ zinc-binding FY138_13370 PF09382 RQC domain FY138_13375 PF00480 ROK family FY138_13380 PF13407 Periplasmic binding protein domain FY138_13385 PF02653 Branched-chain amino acid transport system / permease component FY138_13390 PF00005 ABC transporter FY138_13395 PF00485 Phosphoribulokinase / Uridine kinase family FY138_13400 PF00462 Glutaredoxin FY138_13405 PF07972 NrdI Flavodoxin like FY138_13410 PF02867 Ribonucleotide reductase, barrel domain FY138_13410 PF00317 Ribonucleotide reductase, all-alpha domain FY138_13410 PF08343 Ribonucleotide reductase N-terminal FY138_13415 PF00268 Ribonucleotide reductase, small chain FY138_13425 PF02463 RecF/RecN/SMC N terminal domain FY138_13430 PF00899 ThiF family FY138_13430 PF00581 Rhodanese-like domain FY138_13445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_13445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_13455 PF00294 pfkB family carbohydrate kinase FY138_13465 PF05175 Methyltransferase small domain FY138_13465 PF08468 Methyltransferase small domain N-terminal FY138_13470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY138_13470 PF01138 3' exoribonuclease family, domain 1 FY138_13470 PF03725 3' exoribonuclease family, domain 2 FY138_13470 PF00575 S1 RNA binding domain FY138_13470 PF00013 KH domain FY138_13475 PF00312 Ribosomal protein S15 FY138_13480 PF09157 Pseudouridine synthase II TruB, C-terminal FY138_13480 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY138_13480 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY138_13485 PF02033 Ribosome-binding factor A FY138_13490 PF04760 Translation initiation factor IF-2, N-terminal region FY138_13490 PF08364 Bacterial translation initiation factor IF-2 associated region FY138_13490 PF03144 Elongation factor Tu domain 2 FY138_13490 PF00009 Elongation factor Tu GTP binding domain FY138_13490 PF11987 Translation-initiation factor 2 FY138_13500 PF08529 NusA N-terminal domain FY138_13500 PF00575 S1 RNA binding domain FY138_13500 PF13184 NusA-like KH domain FY138_13505 PF02576 RimP N-terminal domain FY138_13505 PF17384 RimP C-terminal SH3 domain FY138_13510 PF05977 Transmembrane secretion effector FY138_13520 PF13406 Transglycosylase SLT domain FY138_13525 PF02132 RecR protein FY138_13525 PF13662 Toprim domain FY138_13535 PF02575 YbaB/EbfC DNA-binding family FY138_13540 PF12169 DNA polymerase III subunits gamma and tau domain III FY138_13540 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY138_13540 PF12170 DNA polymerase III tau subunit V interacting with alpha FY138_13555 PF09297 NADH pyrophosphatase zinc ribbon domain FY138_13555 PF00293 NUDIX domain FY138_13555 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY138_13560 PF01817 Chorismate mutase type II FY138_13560 PF00800 Prephenate dehydratase FY138_13565 PF02348 Cytidylyltransferase FY138_13570 PF00034 Cytochrome c FY138_13575 PF02397 Bacterial sugar transferase FY138_13580 PF00905 Penicillin binding protein transpeptidase domain FY138_13580 PF00912 Transglycosylase FY138_13585 PF04073 Aminoacyl-tRNA editing domain FY138_13590 PF00313 'Cold-shock' DNA-binding domain FY138_13595 PF07687 Peptidase dimerisation domain FY138_13595 PF01546 Peptidase family M20/M25/M40 FY138_13600 PF01047 MarR family FY138_13605 PF01612 3'-5' exonuclease FY138_13605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY138_13605 PF01367 5'-3' exonuclease, C-terminal SAM fold FY138_13605 PF00476 DNA polymerase family A FY138_13610 PF01783 Ribosomal L32p protein family FY138_13615 PF02743 Cache domain FY138_13615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_13615 PF00512 His Kinase A (phospho-acceptor) domain FY138_13620 PF02954 Bacterial regulatory protein, Fis family FY138_13620 PF00072 Response regulator receiver domain FY138_13620 PF00158 Sigma-54 interaction domain FY138_13625 PF03401 Tripartite tricarboxylate transporter family receptor FY138_13630 PF07331 Tripartite tricarboxylate transporter TctB family FY138_13635 PF01970 Tripartite tricarboxylate transporter TctA family FY138_13640 PF04102 SlyX FY138_13650 PF00226 DnaJ domain FY138_13650 PF01556 DnaJ C terminal domain FY138_13650 PF00684 DnaJ central domain FY138_13655 PF00012 Hsp70 protein FY138_13670 PF01625 Peptide methionine sulfoxide reductase FY138_13675 PF02608 ABC transporter substrate-binding protein PnrA-like FY138_13680 PF00005 ABC transporter FY138_13685 PF02653 Branched-chain amino acid transport system / permease component FY138_13690 PF02653 Branched-chain amino acid transport system / permease component FY138_13695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY138_13700 PF01048 Phosphorylase superfamily FY138_13705 PF01791 DeoC/LacD family aldolase FY138_13710 PF02885 Glycosyl transferase family, helical bundle domain FY138_13710 PF00591 Glycosyl transferase family, a/b domain FY138_13710 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY138_13725 PF00962 Adenosine/AMP deaminase FY138_13730 PF01676 Metalloenzyme superfamily FY138_13740 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY138_13745 PF00510 Cytochrome c oxidase subunit III FY138_13750 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY138_13755 PF06481 COX Aromatic Rich Motif FY138_13755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY138_13760 PF00083 Sugar (and other) transporter FY138_13760 PF07690 Major Facilitator Superfamily FY138_13765 PF01493 GXGXG motif FY138_13765 PF01645 Conserved region in glutamate synthase FY138_13765 PF00310 Glutamine amidotransferases class-II FY138_13765 PF04898 Glutamate synthase central domain FY138_13770 PF00667 FAD binding domain FY138_13770 PF00258 Flavodoxin FY138_13770 PF00175 Oxidoreductase NAD-binding domain FY138_13790 PF00109 Beta-ketoacyl synthase, N-terminal domain FY138_13790 PF02801 Beta-ketoacyl synthase, C-terminal domain FY138_13795 PF07977 FabA-like domain FY138_13805 PF03458 UPF0126 domain FY138_13815 PF06912 Protein of unknown function (DUF1275) FY138_13825 PF00528 Binding-protein-dependent transport system inner membrane component FY138_13830 PF00005 ABC transporter FY138_13835 PF00392 Bacterial regulatory proteins, gntR family FY138_13835 PF07702 UTRA domain FY138_13840 PF01618 MotA/TolQ/ExbB proton channel family FY138_13845 PF02472 Biopolymer transport protein ExbD/TolR FY138_13855 PF02615 Malate/L-lactate dehydrogenase FY138_13870 PF00625 Guanylate kinase FY138_13875 PF07969 Amidohydrolase family FY138_13880 PF06299 Protein of unknown function (DUF1045) FY138_13885 PF00528 Binding-protein-dependent transport system inner membrane component FY138_13890 PF00528 Binding-protein-dependent transport system inner membrane component FY138_13900 PF00005 ABC transporter FY138_13910 PF00005 ABC transporter FY138_13915 PF00005 ABC transporter FY138_13920 PF06007 Phosphonate metabolism protein PhnJ FY138_13925 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY138_13930 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY138_13935 PF06754 Phosphonate metabolism protein PhnG FY138_13940 PF00392 Bacterial regulatory proteins, gntR family FY138_13940 PF07702 UTRA domain FY138_13945 PF01113 Dihydrodipicolinate reductase, N-terminus FY138_13945 PF05173 Dihydrodipicolinate reductase, C-terminus FY138_13950 PF02685 Glucokinase FY138_13955 PF02142 MGS-like domain FY138_13960 PF03411 Penicillin-insensitive murein endopeptidase FY138_13965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_13970 PF00528 Binding-protein-dependent transport system inner membrane component FY138_13975 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_13975 PF00528 Binding-protein-dependent transport system inner membrane component FY138_13980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_13980 PF00005 ABC transporter FY138_13985 PF01266 FAD dependent oxidoreductase FY138_13990 PF00120 Glutamine synthetase, catalytic domain FY138_13995 PF01266 FAD dependent oxidoreductase FY138_14005 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14010 PF00005 ABC transporter FY138_14015 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY138_14030 PF02082 Transcriptional regulator FY138_14035 PF13416 Bacterial extracellular solute-binding protein FY138_14045 PF05987 Bacterial protein of unknown function (DUF898) FY138_14050 PF00171 Aldehyde dehydrogenase family FY138_14055 PF03466 LysR substrate binding domain FY138_14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_14060 PF00892 EamA-like transporter family FY138_14075 PF00877 NlpC/P60 family FY138_14085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY138_14085 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY138_14090 PF00883 Cytosol aminopeptidase family, catalytic domain FY138_14090 PF02789 Cytosol aminopeptidase family, N-terminal domain FY138_14110 PF00437 Type II/IV secretion system protein FY138_14125 PF00263 Bacterial type II and III secretion system protein FY138_14125 PF04972 BON domain FY138_14125 PF13629 Pilus formation protein N terminal region FY138_14165 PF00117 Glutamine amidotransferase class-I FY138_14170 PF07411 Domain of unknown function (DUF1508) FY138_14175 PF01183 Glycosyl hydrolases family 25 FY138_14180 PF00892 EamA-like transporter family FY138_14185 PF00392 Bacterial regulatory proteins, gntR family FY138_14185 PF00155 Aminotransferase class I and II FY138_14200 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_14215 PF06421 GTP-binding protein LepA C-terminus FY138_14215 PF03144 Elongation factor Tu domain 2 FY138_14215 PF00009 Elongation factor Tu GTP binding domain FY138_14215 PF00679 Elongation factor G C-terminus FY138_14220 PF00795 Carbon-nitrogen hydrolase FY138_14250 PF12833 Helix-turn-helix domain FY138_14250 PF02311 AraC-like ligand binding domain FY138_14255 PF03480 Bacterial extracellular solute-binding protein, family 7 FY138_14280 PF05198 Translation initiation factor IF-3, N-terminal domain FY138_14280 PF00707 Translation initiation factor IF-3, C-terminal domain FY138_14285 PF01632 Ribosomal protein L35 FY138_14290 PF00453 Ribosomal protein L20 FY138_14300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY138_14300 PF01409 tRNA synthetases class II core domain (F) FY138_14305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY138_14305 PF01588 Putative tRNA binding domain FY138_14305 PF03147 Ferredoxin-fold anticodon binding domain FY138_14305 PF03484 tRNA synthetase B5 domain FY138_14305 PF03483 B3/4 domain FY138_14310 PF00248 Aldo/keto reductase family FY138_14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_14315 PF03466 LysR substrate binding domain FY138_14325 PF00248 Aldo/keto reductase family FY138_14330 PF01965 DJ-1/PfpI family FY138_14330 PF12833 Helix-turn-helix domain FY138_14340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_14340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_14355 PF13742 OB-fold nucleic acid binding domain FY138_14355 PF02601 Exonuclease VII, large subunit FY138_14360 PF13378 Enolase C-terminal domain-like FY138_14360 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_14365 PF07729 FCD domain FY138_14365 PF00392 Bacterial regulatory proteins, gntR family FY138_14370 PF01047 MarR family FY138_14380 PF02073 Thermophilic metalloprotease (M29) FY138_14385 PF04073 Aminoacyl-tRNA editing domain FY138_14390 PF03960 ArsC family FY138_14405 PF00440 Bacterial regulatory proteins, tetR family FY138_14415 PF00958 GMP synthase C terminal domain FY138_14415 PF00117 Glutamine amidotransferase class-I FY138_14430 PF03073 TspO/MBR family FY138_14455 PF01189 16S rRNA methyltransferase RsmB/F FY138_14455 PF01029 NusB family FY138_14460 PF03330 Lytic transglycolase FY138_14470 PF08331 Domain of unknown function (DUF1730) FY138_14475 PF00043 Glutathione S-transferase, C-terminal domain FY138_14475 PF13417 Glutathione S-transferase, N-terminal domain FY138_14480 PF02673 Bacitracin resistance protein BacA FY138_14495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY138_14505 PF13649 Methyltransferase domain FY138_14510 PF02768 DNA polymerase III beta subunit, C-terminal domain FY138_14510 PF02767 DNA polymerase III beta subunit, central domain FY138_14510 PF00712 DNA polymerase III beta subunit, N-terminal domain FY138_14515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_14520 PF02021 Uncharacterised protein family UPF0102 FY138_14525 PF14602 Hexapeptide repeat of succinyl-transferase FY138_14525 PF12464 Maltose acetyltransferase FY138_14530 PF13416 Bacterial extracellular solute-binding protein FY138_14535 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14540 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14545 PF00005 ABC transporter FY138_14555 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY138_14555 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY138_14560 PF01078 Magnesium chelatase, subunit ChlI FY138_14560 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY138_14565 PF00291 Pyridoxal-phosphate dependent enzyme FY138_14570 PF01810 LysE type translocator FY138_14575 PF00692 dUTPase FY138_14580 PF00009 Elongation factor Tu GTP binding domain FY138_14580 PF03144 Elongation factor Tu domain 2 FY138_14580 PF16658 Class II release factor RF3, C-terminal domain FY138_14585 PF04127 DNA / pantothenate metabolism flavoprotein FY138_14585 PF02441 Flavoprotein FY138_14600 PF03109 ABC1 family FY138_14605 PF01209 ubiE/COQ5 methyltransferase family FY138_14610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY138_14610 PF06827 Zinc finger found in FPG and IleRS FY138_14610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY138_14615 PF00378 Enoyl-CoA hydratase/isomerase FY138_14620 PF01649 Ribosomal protein S20 FY138_14685 PF06472 ABC transporter transmembrane region 2 FY138_14685 PF00005 ABC transporter FY138_14710 PF01261 Xylose isomerase-like TIM barrel FY138_14715 PF00485 Phosphoribulokinase / Uridine kinase family FY138_14720 PF01261 Xylose isomerase-like TIM barrel FY138_14725 PF02653 Branched-chain amino acid transport system / permease component FY138_14730 PF02653 Branched-chain amino acid transport system / permease component FY138_14735 PF00005 ABC transporter FY138_14745 PF00356 Bacterial regulatory proteins, lacI family FY138_14755 PF00158 Sigma-54 interaction domain FY138_14755 PF02954 Bacterial regulatory protein, Fis family FY138_14755 PF01590 GAF domain FY138_14760 PF08240 Alcohol dehydrogenase GroES-like domain FY138_14760 PF00107 Zinc-binding dehydrogenase FY138_14770 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_14775 PF00330 Aconitase family (aconitate hydratase) FY138_14775 PF06434 Aconitate hydratase 2 N-terminus FY138_14775 PF11791 Aconitate B N-terminal domain FY138_14790 PF13953 PapC C-terminal domain FY138_14790 PF13954 PapC N-terminal domain FY138_14790 PF00577 Outer membrane usher protein FY138_14800 PF00005 ABC transporter FY138_14805 PF00664 ABC transporter transmembrane region FY138_14805 PF00005 ABC transporter FY138_14810 PF03401 Tripartite tricarboxylate transporter family receptor FY138_14815 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY138_14815 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY138_14825 PF05532 CsbD-like FY138_14845 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14850 PF00005 ABC transporter FY138_14850 PF17850 CysA C-terminal regulatory domain FY138_14860 PF00459 Inositol monophosphatase family FY138_14865 PF00005 ABC transporter FY138_14865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_14875 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14875 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_14880 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_14890 PF07729 FCD domain FY138_14890 PF00392 Bacterial regulatory proteins, gntR family FY138_14900 PF13378 Enolase C-terminal domain-like FY138_14900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_14905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_14905 PF00005 ABC transporter FY138_14910 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14910 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_14915 PF00528 Binding-protein-dependent transport system inner membrane component FY138_14920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_14925 PF07729 FCD domain FY138_14925 PF00392 Bacterial regulatory proteins, gntR family FY138_14930 PF08450 SMP-30/Gluconolactonase/LRE-like region FY138_14935 PF00701 Dihydrodipicolinate synthetase family FY138_14940 PF07690 Major Facilitator Superfamily FY138_14950 PF00384 Molybdopterin oxidoreductase FY138_14950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY138_14950 PF00037 4Fe-4S binding domain FY138_14950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY138_14950 PF01568 Molydopterin dinucleotide binding domain FY138_14955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY138_14955 PF00037 4Fe-4S binding domain FY138_14955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY138_14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_14965 PF03466 LysR substrate binding domain FY138_14970 PF01613 Flavin reductase like domain FY138_14975 PF02530 Porin subfamily FY138_14980 PF00563 EAL domain FY138_14980 PF03707 Bacterial signalling protein N terminal repeat FY138_14980 PF00990 Diguanylate cyclase, GGDEF domain FY138_14985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_14985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_14990 PF00005 ABC transporter FY138_14995 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15000 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15005 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_15015 PF00356 Bacterial regulatory proteins, lacI family FY138_15020 PF05544 Proline racemase FY138_15030 PF01266 FAD dependent oxidoreductase FY138_15035 PF00005 ABC transporter FY138_15040 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15045 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15055 PF02615 Malate/L-lactate dehydrogenase FY138_15060 PF00701 Dihydrodipicolinate synthetase family FY138_15065 PF07729 FCD domain FY138_15065 PF00392 Bacterial regulatory proteins, gntR family FY138_15070 PF12327 FtsZ family, C-terminal domain FY138_15070 PF00091 Tubulin/FtsZ family, GTPase domain FY138_15075 PF00072 Response regulator receiver domain FY138_15095 PF00005 ABC transporter FY138_15100 PF13533 Biotin-lipoyl like FY138_15105 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY138_15105 PF02056 Family 4 glycosyl hydrolase FY138_15110 PF00005 ABC transporter FY138_15110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_15115 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15115 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_15120 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_15130 PF02056 Family 4 glycosyl hydrolase FY138_15130 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY138_15155 PF00480 ROK family FY138_15160 PF13416 Bacterial extracellular solute-binding protein FY138_15165 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15170 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15175 PF14698 Argininosuccinate lyase C-terminal FY138_15175 PF00206 Lyase FY138_15180 PF00005 ABC transporter FY138_15180 PF08402 TOBE domain FY138_15185 PF00294 pfkB family carbohydrate kinase FY138_15190 PF12411 Choline sulfatase enzyme C terminal FY138_15190 PF00884 Sulfatase FY138_15195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY138_15200 PF03466 LysR substrate binding domain FY138_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_15205 PF00005 ABC transporter FY138_15210 PF01032 FecCD transport family FY138_15215 PF01032 FecCD transport family FY138_15225 PF07715 TonB-dependent Receptor Plug Domain FY138_15225 PF00593 TonB dependent receptor FY138_15230 PF12833 Helix-turn-helix domain FY138_15235 PF00141 Peroxidase FY138_15240 PF03466 LysR substrate binding domain FY138_15240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_15250 PF00672 HAMP domain FY138_15250 PF00512 His Kinase A (phospho-acceptor) domain FY138_15255 PF00486 Transcriptional regulatory protein, C terminal FY138_15255 PF00072 Response regulator receiver domain FY138_15260 PF00529 HlyD membrane-fusion protein of T1SS FY138_15260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_15265 PF00873 AcrB/AcrD/AcrF family FY138_15275 PF01865 Protein of unknown function DUF47 FY138_15280 PF01384 Phosphate transporter family FY138_15285 PF02735 Ku70/Ku80 beta-barrel domain FY138_15290 PF13298 DNA polymerase Ligase (LigD) FY138_15290 PF01068 ATP dependent DNA ligase domain FY138_15290 PF04679 ATP dependent DNA ligase C terminal region FY138_15295 PF02735 Ku70/Ku80 beta-barrel domain FY138_15310 PF00990 Diguanylate cyclase, GGDEF domain FY138_15310 PF00563 EAL domain FY138_15310 PF03707 Bacterial signalling protein N terminal repeat FY138_15310 PF13188 PAS domain FY138_15320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_15325 PF03786 D-mannonate dehydratase (UxuA) FY138_15330 PF00392 Bacterial regulatory proteins, gntR family FY138_15330 PF07729 FCD domain FY138_15335 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15340 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_15340 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_15345 PF00005 ABC transporter FY138_15350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_15350 PF00005 ABC transporter FY138_15355 PF03459 TOBE domain FY138_15355 PF00005 ABC transporter FY138_15355 PF17912 MalK OB fold domain FY138_15360 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15365 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15375 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_15375 PF01571 Aminomethyltransferase folate-binding domain FY138_15375 PF17806 Sarcosine oxidase A3 domain FY138_15375 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY138_15380 PF00356 Bacterial regulatory proteins, lacI family FY138_15390 PF13361 UvrD-like helicase C-terminal domain FY138_15390 PF00580 UvrD/REP helicase N-terminal domain FY138_15395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY138_15400 PF16363 GDP-mannose 4,6 dehydratase FY138_15405 PF04321 RmlD substrate binding domain FY138_15410 PF00483 Nucleotidyl transferase FY138_15425 PF05045 Rhamnan synthesis protein F FY138_15455 PF01370 NAD dependent epimerase/dehydratase family FY138_15460 PF13580 SIS domain FY138_15465 PF01501 Glycosyl transferase family 8 FY138_15465 PF00535 Glycosyl transferase family 2 FY138_15475 PF03275 UDP-galactopyranose mutase FY138_15480 PF00664 ABC transporter transmembrane region FY138_15480 PF00005 ABC transporter FY138_15490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_15490 PF03466 LysR substrate binding domain FY138_15495 PF00248 Aldo/keto reductase family FY138_15510 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY138_15510 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY138_15515 PF11953 Domain of unknown function (DUF3470) FY138_15515 PF00037 4Fe-4S binding domain FY138_15525 PF12852 Cupin FY138_15525 PF12833 Helix-turn-helix domain FY138_15530 PF00106 short chain dehydrogenase FY138_15535 PF03009 Glycerophosphoryl diester phosphodiesterase family FY138_15540 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY138_15540 PF00480 ROK family FY138_15550 PF16220 Domain of unknown function (DUF4880) FY138_15550 PF04773 FecR protein FY138_15555 PF07715 TonB-dependent Receptor Plug Domain FY138_15555 PF00593 TonB dependent receptor FY138_15560 PF07690 Major Facilitator Superfamily FY138_15580 PF07470 Glycosyl Hydrolase Family 88 FY138_15590 PF00005 ABC transporter FY138_15590 PF17912 MalK OB fold domain FY138_15595 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15600 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15605 PF00356 Bacterial regulatory proteins, lacI family FY138_15615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_15615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_15620 PF01261 Xylose isomerase-like TIM barrel FY138_15625 PF13407 Periplasmic binding protein domain FY138_15630 PF13407 Periplasmic binding protein domain FY138_15635 PF00356 Bacterial regulatory proteins, lacI family FY138_15640 PF02803 Thiolase, C-terminal domain FY138_15640 PF00108 Thiolase, N-terminal domain FY138_15645 PF01144 Coenzyme A transferase FY138_15650 PF01144 Coenzyme A transferase FY138_15655 PF09339 IclR helix-turn-helix domain FY138_15655 PF01614 Bacterial transcriptional regulator FY138_15665 PF01494 FAD binding domain FY138_15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_15670 PF03466 LysR substrate binding domain FY138_15675 PF00561 alpha/beta hydrolase fold FY138_15680 PF02627 Carboxymuconolactone decarboxylase family FY138_15685 PF00775 Dioxygenase FY138_15685 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY138_15690 PF00775 Dioxygenase FY138_15695 PF00206 Lyase FY138_15695 PF10397 Adenylosuccinate lyase C-terminus FY138_15700 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15705 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15710 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_15715 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_15720 PF00005 ABC transporter FY138_15725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY138_15725 PF08501 Shikimate dehydrogenase substrate binding domain FY138_15730 PF01220 Dehydroquinase class II FY138_15740 PF01261 Xylose isomerase-like TIM barrel FY138_15740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_15755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_15755 PF00005 ABC transporter FY138_15760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_15765 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15770 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15770 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_15785 PF13458 Periplasmic binding protein FY138_15800 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_15800 PF00005 ABC transporter FY138_15805 PF00005 ABC transporter FY138_15815 PF00294 pfkB family carbohydrate kinase FY138_15820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY138_15820 PF00205 Thiamine pyrophosphate enzyme, central domain FY138_15820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY138_15825 PF01261 Xylose isomerase-like TIM barrel FY138_15830 PF04962 KduI/IolB family FY138_15835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_15835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_15840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_15840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_15845 PF00356 Bacterial regulatory proteins, lacI family FY138_15850 PF01047 MarR family FY138_15855 PF02633 Creatinine amidohydrolase FY138_15860 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY138_15860 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY138_15880 PF13505 Outer membrane protein beta-barrel domain FY138_15900 PF03824 High-affinity nickel-transport protein FY138_15920 PF01081 KDPG and KHG aldolase FY138_15925 PF01928 CYTH domain FY138_15935 PF17773 UPF0176 acylphosphatase like domain FY138_15935 PF00581 Rhodanese-like domain FY138_15940 PF00990 Diguanylate cyclase, GGDEF domain FY138_15940 PF13188 PAS domain FY138_15940 PF03707 Bacterial signalling protein N terminal repeat FY138_15940 PF00563 EAL domain FY138_15945 PF03180 NLPA lipoprotein FY138_15950 PF00528 Binding-protein-dependent transport system inner membrane component FY138_15955 PF00005 ABC transporter FY138_15955 PF09383 NIL domain FY138_15960 PF00881 Nitroreductase family FY138_15965 PF00232 Glycosyl hydrolase family 1 FY138_15970 PF01261 Xylose isomerase-like TIM barrel FY138_15975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_15975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_15980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY138_15980 PF00356 Bacterial regulatory proteins, lacI family FY138_15990 PF07690 Major Facilitator Superfamily FY138_15995 PF13533 Biotin-lipoyl like FY138_16000 PF00440 Bacterial regulatory proteins, tetR family FY138_16005 PF03741 Integral membrane protein TerC family FY138_16005 PF03471 Transporter associated domain FY138_16010 PF02080 TrkA-C domain FY138_16010 PF03600 Citrate transporter FY138_16015 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY138_16020 PF01336 OB-fold nucleic acid binding domain FY138_16020 PF00152 tRNA synthetases class II (D, K and N) FY138_16025 PF01734 Patatin-like phospholipase FY138_16035 PF01297 Zinc-uptake complex component A periplasmic FY138_16040 PF00005 ABC transporter FY138_16045 PF00950 ABC 3 transport family FY138_16050 PF00950 ABC 3 transport family FY138_16065 PF09339 IclR helix-turn-helix domain FY138_16065 PF01614 Bacterial transcriptional regulator FY138_16070 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY138_16075 PF13936 Helix-turn-helix domain FY138_16075 PF04198 Putative sugar-binding domain FY138_16090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY138_16090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY138_16100 PF00633 Helix-hairpin-helix motif FY138_16100 PF00730 HhH-GPD superfamily base excision DNA repair protein FY138_16100 PF10576 Iron-sulfur binding domain of endonuclease III FY138_16115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_16115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_16120 PF13419 Haloacid dehalogenase-like hydrolase FY138_16125 PF08125 Mannitol dehydrogenase C-terminal domain FY138_16125 PF01232 Mannitol dehydrogenase Rossmann domain FY138_16135 PF08402 TOBE domain FY138_16135 PF00005 ABC transporter FY138_16140 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16145 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16155 PF04198 Putative sugar-binding domain FY138_16160 PF00005 ABC transporter FY138_16160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_16165 PF01546 Peptidase family M20/M25/M40 FY138_16165 PF07687 Peptidase dimerisation domain FY138_16170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_16175 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16180 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16180 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_16190 PF01965 DJ-1/PfpI family FY138_16195 PF01425 Amidase FY138_16200 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_16200 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16205 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_16215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_16215 PF03466 LysR substrate binding domain FY138_16220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_16220 PF00005 ABC transporter FY138_16225 PF00005 ABC transporter FY138_16225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_16230 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16230 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_16235 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_16245 PF01244 Membrane dipeptidase (Peptidase family M19) FY138_16255 PF01546 Peptidase family M20/M25/M40 FY138_16255 PF07687 Peptidase dimerisation domain FY138_16260 PF07690 Major Facilitator Superfamily FY138_16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_16265 PF03466 LysR substrate binding domain FY138_16270 PF01979 Amidohydrolase family FY138_16270 PF13382 Adenine deaminase C-terminal domain FY138_16280 PF00005 ABC transporter FY138_16280 PF08402 TOBE domain FY138_16290 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16300 PF00356 Bacterial regulatory proteins, lacI family FY138_16305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_16305 PF03466 LysR substrate binding domain FY138_16310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_16310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_16310 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_16315 PF07715 TonB-dependent Receptor Plug Domain FY138_16325 PF00296 Luciferase-like monooxygenase FY138_16330 PF00005 ABC transporter FY138_16335 PF01032 FecCD transport family FY138_16340 PF01032 FecCD transport family FY138_16350 PF08021 Siderophore-interacting FAD-binding domain FY138_16350 PF04954 Siderophore-interacting protein FY138_16360 PF00501 AMP-binding enzyme FY138_16360 PF00550 Phosphopantetheine attachment site FY138_16360 PF00975 Thioesterase domain FY138_16360 PF00668 Condensation domain FY138_16360 PF13193 AMP-binding enzyme C-terminal domain FY138_16365 PF00975 Thioesterase domain FY138_16365 PF00550 Phosphopantetheine attachment site FY138_16365 PF00668 Condensation domain FY138_16365 PF00501 AMP-binding enzyme FY138_16370 PF00668 Condensation domain FY138_16370 PF00550 Phosphopantetheine attachment site FY138_16370 PF00501 AMP-binding enzyme FY138_16370 PF13193 AMP-binding enzyme C-terminal domain FY138_16375 PF00425 chorismate binding enzyme FY138_16380 PF00501 AMP-binding enzyme FY138_16380 PF13193 AMP-binding enzyme C-terminal domain FY138_16385 PF00857 Isochorismatase family FY138_16385 PF00550 Phosphopantetheine attachment site FY138_16395 PF01648 4'-phosphopantetheinyl transferase superfamily FY138_16395 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY138_16405 PF03264 NapC/NirT cytochrome c family, N-terminal region FY138_16410 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY138_16415 PF01568 Molydopterin dinucleotide binding domain FY138_16415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY138_16415 PF00384 Molybdopterin oxidoreductase FY138_16430 PF06796 Periplasmic nitrate reductase protein NapE FY138_16440 PF00005 ABC transporter FY138_16465 PF01136 Peptidase family U32 FY138_16475 PF04343 Protein of unknown function, DUF488 FY138_16480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY138_16485 PF02441 Flavoprotein FY138_16495 PF00510 Cytochrome c oxidase subunit III FY138_16505 PF00034 Cytochrome c FY138_16510 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY138_16515 PF07728 AAA domain (dynein-related subfamily) FY138_16515 PF08406 CbbQ/NirQ/NorQ C-terminal FY138_16520 PF00092 von Willebrand factor type A domain FY138_16540 PF07732 Multicopper oxidase FY138_16540 PF00394 Multicopper oxidase FY138_16555 PF00034 Cytochrome c FY138_16575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_16575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_16585 PF00356 Bacterial regulatory proteins, lacI family FY138_16590 PF02653 Branched-chain amino acid transport system / permease component FY138_16595 PF02653 Branched-chain amino acid transport system / permease component FY138_16600 PF00005 ABC transporter FY138_16605 PF13407 Periplasmic binding protein domain FY138_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_16615 PF03466 LysR substrate binding domain FY138_16630 PF00356 Bacterial regulatory proteins, lacI family FY138_16635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_16635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_16640 PF01261 Xylose isomerase-like TIM barrel FY138_16645 PF13416 Bacterial extracellular solute-binding protein FY138_16650 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16655 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16660 PF03459 TOBE domain FY138_16660 PF00005 ABC transporter FY138_16660 PF17912 MalK OB fold domain FY138_16675 PF03741 Integral membrane protein TerC family FY138_16675 PF03471 Transporter associated domain FY138_16680 PF00356 Bacterial regulatory proteins, lacI family FY138_16695 PF00459 Inositol monophosphatase family FY138_16700 PF00990 Diguanylate cyclase, GGDEF domain FY138_16700 PF03707 Bacterial signalling protein N terminal repeat FY138_16700 PF00563 EAL domain FY138_16700 PF13188 PAS domain FY138_16725 PF04717 Type VI secretion system, phage-baseplate injector FY138_16745 PF00004 ATPase family associated with various cellular activities (AAA) FY138_16745 PF07724 AAA domain (Cdc48 subfamily) FY138_16745 PF17871 AAA lid domain FY138_16745 PF10431 C-terminal, D2-small domain, of ClpB protein FY138_16755 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY138_16760 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY138_16780 PF05947 Type VI secretion system, TssF FY138_16795 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY138_16800 PF00691 OmpA family FY138_16805 PF06761 Intracellular multiplication and human macrophage-killing FY138_16805 PF14331 ImcF-related N-terminal domain FY138_16805 PF06744 Type VI secretion protein IcmF C-terminal FY138_16815 PF07238 PilZ domain FY138_16815 PF00069 Protein kinase domain FY138_16820 PF02563 Polysaccharide biosynthesis/export protein FY138_16830 PF00083 Sugar (and other) transporter FY138_16830 PF08946 Osmosensory transporter coiled coil FY138_16840 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_16840 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_16845 PF00106 short chain dehydrogenase FY138_16850 PF02653 Branched-chain amino acid transport system / permease component FY138_16855 PF00005 ABC transporter FY138_16860 PF13407 Periplasmic binding protein domain FY138_16865 PF12833 Helix-turn-helix domain FY138_16870 PF08240 Alcohol dehydrogenase GroES-like domain FY138_16870 PF00107 Zinc-binding dehydrogenase FY138_16885 PF00005 ABC transporter FY138_16895 PF00245 Alkaline phosphatase FY138_16900 PF00440 Bacterial regulatory proteins, tetR family FY138_16915 PF00551 Formyl transferase FY138_16920 PF00464 Serine hydroxymethyltransferase FY138_16930 PF01571 Aminomethyltransferase folate-binding domain FY138_16930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_16930 PF17806 Sarcosine oxidase A3 domain FY138_16930 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY138_16940 PF01266 FAD dependent oxidoreductase FY138_16955 PF00701 Dihydrodipicolinate synthetase family FY138_16960 PF00171 Aldehyde dehydrogenase family FY138_16965 PF01266 FAD dependent oxidoreductase FY138_16975 PF00005 ABC transporter FY138_16975 PF00571 CBS domain FY138_16980 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16985 PF00528 Binding-protein-dependent transport system inner membrane component FY138_16990 PF05544 Proline racemase FY138_16995 PF03807 NADP oxidoreductase coenzyme F420-dependent FY138_16995 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY138_17005 PF00970 Oxidoreductase FAD-binding domain FY138_17005 PF00111 2Fe-2S iron-sulfur cluster binding domain FY138_17005 PF00175 Oxidoreductase NAD-binding domain FY138_17010 PF00355 Rieske [2Fe-2S] domain FY138_17010 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY138_17030 PF01638 HxlR-like helix-turn-helix FY138_17035 PF00107 Zinc-binding dehydrogenase FY138_17035 PF08240 Alcohol dehydrogenase GroES-like domain FY138_17040 PF13382 Adenine deaminase C-terminal domain FY138_17040 PF01979 Amidohydrolase family FY138_17055 PF00005 ABC transporter FY138_17080 PF07690 Major Facilitator Superfamily FY138_17090 PF01979 Amidohydrolase family FY138_17095 PF00817 impB/mucB/samB family FY138_17095 PF11799 impB/mucB/samB family C-terminal domain FY138_17115 PF00005 ABC transporter FY138_17115 PF17912 MalK OB fold domain FY138_17120 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17125 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17150 PF08220 DeoR-like helix-turn-helix domain FY138_17150 PF00455 DeoR C terminal sensor domain FY138_17155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_17155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_17160 PF00005 ABC transporter FY138_17165 PF02653 Branched-chain amino acid transport system / permease component FY138_17170 PF13407 Periplasmic binding protein domain FY138_17175 PF00480 ROK family FY138_17175 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY138_17185 PF01177 Asp/Glu/Hydantoin racemase FY138_17190 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17195 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17205 PF08402 TOBE domain FY138_17205 PF00005 ABC transporter FY138_17225 PF00196 Bacterial regulatory proteins, luxR family FY138_17235 PF00512 His Kinase A (phospho-acceptor) domain FY138_17235 PF00672 HAMP domain FY138_17235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_17240 PF00072 Response regulator receiver domain FY138_17240 PF00486 Transcriptional regulatory protein, C terminal FY138_17260 PF00005 ABC transporter FY138_17260 PF02687 FtsX-like permease family FY138_17260 PF12704 MacB-like periplasmic core domain FY138_17270 PF03466 LysR substrate binding domain FY138_17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_17280 PF00510 Cytochrome c oxidase subunit III FY138_17285 PF00510 Cytochrome c oxidase subunit III FY138_17290 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY138_17295 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY138_17300 PF00034 Cytochrome c FY138_17315 PF00890 FAD binding domain FY138_17315 PF02910 Fumarate reductase flavoprotein C-term FY138_17320 PF05199 GMC oxidoreductase FY138_17320 PF00732 GMC oxidoreductase FY138_17325 PF05199 GMC oxidoreductase FY138_17325 PF00732 GMC oxidoreductase FY138_17330 PF00005 ABC transporter FY138_17330 PF17912 MalK OB fold domain FY138_17330 PF03459 TOBE domain FY138_17335 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17340 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17345 PF01547 Bacterial extracellular solute-binding protein FY138_17350 PF00171 Aldehyde dehydrogenase family FY138_17355 PF00378 Enoyl-CoA hydratase/isomerase FY138_17360 PF01144 Coenzyme A transferase FY138_17365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_17365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_17370 PF00356 Bacterial regulatory proteins, lacI family FY138_17375 PF03928 Haem-degrading FY138_17380 PF07715 TonB-dependent Receptor Plug Domain FY138_17385 PF01497 Periplasmic binding protein FY138_17390 PF01032 FecCD transport family FY138_17395 PF01032 FecCD transport family FY138_17400 PF00005 ABC transporter FY138_17415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_17415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_17420 PF04324 BFD-like [2Fe-2S] binding domain FY138_17420 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_17425 PF04324 BFD-like [2Fe-2S] binding domain FY138_17425 PF01266 FAD dependent oxidoreductase FY138_17430 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17435 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17440 PF00005 ABC transporter FY138_17440 PF08402 TOBE domain FY138_17455 PF00795 Carbon-nitrogen hydrolase FY138_17460 PF03466 LysR substrate binding domain FY138_17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_17465 PF00857 Isochorismatase family FY138_17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_17470 PF03466 LysR substrate binding domain FY138_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_17480 PF03466 LysR substrate binding domain FY138_17485 PF05163 DinB family FY138_17495 PF00293 NUDIX domain FY138_17500 PF02567 Phenazine biosynthesis-like protein FY138_17515 PF00155 Aminotransferase class I and II FY138_17515 PF00392 Bacterial regulatory proteins, gntR family FY138_17525 PF03466 LysR substrate binding domain FY138_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_17540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_17545 PF00881 Nitroreductase family FY138_17560 PF01323 DSBA-like thioredoxin domain FY138_17565 PF02913 FAD linked oxidases, C-terminal domain FY138_17565 PF01565 FAD binding domain FY138_17570 PF01568 Molydopterin dinucleotide binding domain FY138_17570 PF00384 Molybdopterin oxidoreductase FY138_17575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_17580 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_17585 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_17590 PF00005 ABC transporter FY138_17600 PF00296 Luciferase-like monooxygenase FY138_17605 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY138_17610 PF03358 NADPH-dependent FMN reductase FY138_17625 PF01053 Cys/Met metabolism PLP-dependent enzyme FY138_17630 PF01037 Lrp/AsnC ligand binding domain FY138_17635 PF02733 Dak1 domain FY138_17645 PF00106 short chain dehydrogenase FY138_17650 PF02798 Glutathione S-transferase, N-terminal domain FY138_17655 PF00873 AcrB/AcrD/AcrF family FY138_17660 PF13533 Biotin-lipoyl like FY138_17665 PF00440 Bacterial regulatory proteins, tetR family FY138_17670 PF00109 Beta-ketoacyl synthase, N-terminal domain FY138_17670 PF02801 Beta-ketoacyl synthase, C-terminal domain FY138_17675 PF12327 FtsZ family, C-terminal domain FY138_17675 PF00091 Tubulin/FtsZ family, GTPase domain FY138_17690 PF01554 MatE FY138_17710 PF00753 Metallo-beta-lactamase superfamily FY138_17715 PF03466 LysR substrate binding domain FY138_17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_17725 PF01638 HxlR-like helix-turn-helix FY138_17735 PF02687 FtsX-like permease family FY138_17735 PF00005 ABC transporter FY138_17735 PF12704 MacB-like periplasmic core domain FY138_17740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_17745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_17745 PF11808 Phosphate regulon sensor protein PhoR FY138_17745 PF00989 PAS fold FY138_17745 PF00512 His Kinase A (phospho-acceptor) domain FY138_17750 PF00486 Transcriptional regulatory protein, C terminal FY138_17750 PF00072 Response regulator receiver domain FY138_17770 PF05593 RHS Repeat FY138_17770 PF03527 RHS protein FY138_17790 PF04717 Type VI secretion system, phage-baseplate injector FY138_17800 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_17800 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17825 PF13784 Fic/DOC family N-terminal FY138_17825 PF02661 Fic/DOC family FY138_17840 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_17845 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17850 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_17880 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17885 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17885 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_17890 PF00005 ABC transporter FY138_17890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_17895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_17895 PF00005 ABC transporter FY138_17905 PF02910 Fumarate reductase flavoprotein C-term FY138_17905 PF00890 FAD binding domain FY138_17915 PF13407 Periplasmic binding protein domain FY138_17920 PF00005 ABC transporter FY138_17925 PF02653 Branched-chain amino acid transport system / permease component FY138_17940 PF00248 Aldo/keto reductase family FY138_17945 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_17945 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY138_17945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_17950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_17950 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY138_17960 PF00296 Luciferase-like monooxygenase FY138_17965 PF02653 Branched-chain amino acid transport system / permease component FY138_17970 PF02653 Branched-chain amino acid transport system / permease component FY138_17975 PF00005 ABC transporter FY138_17985 PF00296 Luciferase-like monooxygenase FY138_17990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_17990 PF00005 ABC transporter FY138_17995 PF00528 Binding-protein-dependent transport system inner membrane component FY138_17995 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_18000 PF00528 Binding-protein-dependent transport system inner membrane component FY138_18005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_18010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_18015 PF00296 Luciferase-like monooxygenase FY138_18025 PF00296 Luciferase-like monooxygenase FY138_18030 PF00296 Luciferase-like monooxygenase FY138_18035 PF00291 Pyridoxal-phosphate dependent enzyme FY138_18060 PF13173 AAA domain FY138_18060 PF13635 Domain of unknown function (DUF4143) FY138_18070 PF01850 PIN domain FY138_18075 PF00701 Dihydrodipicolinate synthetase family FY138_18080 PF00155 Aminotransferase class I and II FY138_18090 PF05378 Hydantoinase/oxoprolinase N-terminal region FY138_18090 PF01968 Hydantoinase/oxoprolinase FY138_18095 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_18100 PF00528 Binding-protein-dependent transport system inner membrane component FY138_18105 PF00528 Binding-protein-dependent transport system inner membrane component FY138_18110 PF00005 ABC transporter FY138_18120 PF07729 FCD domain FY138_18120 PF00392 Bacterial regulatory proteins, gntR family FY138_18140 PF01047 MarR family FY138_18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_18155 PF03466 LysR substrate binding domain FY138_18160 PF00106 short chain dehydrogenase FY138_18180 PF00171 Aldehyde dehydrogenase family FY138_18185 PF00107 Zinc-binding dehydrogenase FY138_18185 PF08240 Alcohol dehydrogenase GroES-like domain FY138_18190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_18190 PF03466 LysR substrate binding domain FY138_18210 PF01810 LysE type translocator FY138_18215 PF07536 HWE histidine kinase FY138_18215 PF13581 Histidine kinase-like ATPase domain FY138_18215 PF13426 PAS domain FY138_18240 PF00199 Catalase FY138_18240 PF18011 C-terminal domain found in long catalases FY138_18240 PF06628 Catalase-related immune-responsive FY138_18260 PF00313 'Cold-shock' DNA-binding domain FY138_18290 PF00107 Zinc-binding dehydrogenase FY138_18290 PF08240 Alcohol dehydrogenase GroES-like domain FY138_18295 PF00561 alpha/beta hydrolase fold FY138_18300 PF00106 short chain dehydrogenase FY138_18305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY138_18310 PF00106 short chain dehydrogenase FY138_18315 PF00440 Bacterial regulatory proteins, tetR family FY138_18330 PF01810 LysE type translocator FY138_18340 PF02525 Flavodoxin-like fold FY138_18385 PF01464 Transglycosylase SLT domain FY138_18385 PF01551 Peptidase family M23 FY138_18385 PF10145 Phage-related minor tail protein FY138_18390 PF00004 ATPase family associated with various cellular activities (AAA) FY138_18390 PF07724 AAA domain (Cdc48 subfamily) FY138_18390 PF17871 AAA lid domain FY138_18390 PF02861 Clp amino terminal domain, pathogenicity island component FY138_18390 PF10431 C-terminal, D2-small domain, of ClpB protein FY138_18400 PF05175 Methyltransferase small domain FY138_18400 PF17827 PrmC N-terminal domain FY138_18405 PF00472 RF-1 domain FY138_18405 PF03462 PCRF domain FY138_18410 PF05524 PEP-utilising enzyme, N-terminal FY138_18410 PF01590 GAF domain FY138_18410 PF00391 PEP-utilising enzyme, mobile domain FY138_18410 PF02896 PEP-utilising enzyme, TIM barrel domain FY138_18415 PF13840 ACT domain FY138_18415 PF01842 ACT domain FY138_18415 PF00696 Amino acid kinase family FY138_18420 PF00271 Helicase conserved C-terminal domain FY138_18420 PF00270 DEAD/DEAH box helicase FY138_18425 PF03435 Saccharopine dehydrogenase NADP binding domain FY138_18425 PF16653 Saccharopine dehydrogenase C-terminal domain FY138_18430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY138_18445 PF16363 GDP-mannose 4,6 dehydratase FY138_18455 PF07536 HWE histidine kinase FY138_18455 PF13426 PAS domain FY138_18460 PF07536 HWE histidine kinase FY138_18460 PF08447 PAS fold FY138_18460 PF13426 PAS domain FY138_18465 PF00072 Response regulator receiver domain FY138_18475 PF08281 Sigma-70, region 4 FY138_18475 PF04542 Sigma-70 region 2 FY138_18480 PF01037 Lrp/AsnC ligand binding domain FY138_18485 PF01619 Proline dehydrogenase FY138_18485 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY138_18485 PF14850 DNA-binding domain of Proline dehydrogenase FY138_18485 PF00171 Aldehyde dehydrogenase family FY138_18490 PF00005 ABC transporter FY138_18495 PF00528 Binding-protein-dependent transport system inner membrane component FY138_18500 PF09084 NMT1/THI5 like FY138_18505 PF00171 Aldehyde dehydrogenase family FY138_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_18510 PF03466 LysR substrate binding domain FY138_18515 PF13409 Glutathione S-transferase, N-terminal domain FY138_18530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY138_18530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY138_18530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY138_18535 PF16363 GDP-mannose 4,6 dehydratase FY138_18540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY138_18540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY138_18560 PF01965 DJ-1/PfpI family FY138_18580 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY138_18580 PF01266 FAD dependent oxidoreductase FY138_18590 PF05974 Domain of unknown function (DUF892) FY138_18595 PF01011 PQQ enzyme repeat FY138_18615 PF00501 AMP-binding enzyme FY138_18615 PF13193 AMP-binding enzyme C-terminal domain FY138_18620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY138_18620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY138_18625 PF00732 GMC oxidoreductase FY138_18625 PF05199 GMC oxidoreductase FY138_18630 PF02653 Branched-chain amino acid transport system / permease component FY138_18630 PF11862 Domain of unknown function (DUF3382) FY138_18635 PF02653 Branched-chain amino acid transport system / permease component FY138_18640 PF00005 ABC transporter FY138_18645 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_18645 PF00005 ABC transporter FY138_18660 PF00296 Luciferase-like monooxygenase FY138_18665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_18665 PF13378 Enolase C-terminal domain-like FY138_18670 PF00392 Bacterial regulatory proteins, gntR family FY138_18670 PF07729 FCD domain FY138_18675 PF08125 Mannitol dehydrogenase C-terminal domain FY138_18675 PF01232 Mannitol dehydrogenase Rossmann domain FY138_18680 PF00005 ABC transporter FY138_18680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_18685 PF00005 ABC transporter FY138_18685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_18690 PF00528 Binding-protein-dependent transport system inner membrane component FY138_18690 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_18695 PF00528 Binding-protein-dependent transport system inner membrane component FY138_18700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_18705 PF00557 Metallopeptidase family M24 FY138_18705 PF01321 Creatinase/Prolidase N-terminal domain FY138_18710 PF00106 short chain dehydrogenase FY138_18740 PF00575 S1 RNA binding domain FY138_18745 PF02224 Cytidylate kinase FY138_18775 PF02445 Quinolinate synthetase A protein FY138_18780 PF02910 Fumarate reductase flavoprotein C-term FY138_18780 PF00890 FAD binding domain FY138_18785 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY138_18785 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY138_18805 PF08173 Membrane bound YbgT-like protein FY138_18810 PF02322 Cytochrome bd terminal oxidase subunit II FY138_18815 PF01654 Cytochrome bd terminal oxidase subunit I FY138_18820 PF00005 ABC transporter FY138_18820 PF00664 ABC transporter transmembrane region FY138_18825 PF00664 ABC transporter transmembrane region FY138_18825 PF00005 ABC transporter FY138_18835 PF00107 Zinc-binding dehydrogenase FY138_18835 PF08240 Alcohol dehydrogenase GroES-like domain FY138_18845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY138_18845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY138_18855 PF01037 Lrp/AsnC ligand binding domain FY138_18860 PF01177 Asp/Glu/Hydantoin racemase FY138_18875 PF00343 Carbohydrate phosphorylase FY138_18880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY138_18880 PF02806 Alpha amylase, C-terminal all-beta domain FY138_18880 PF00128 Alpha amylase, catalytic domain FY138_18885 PF00483 Nucleotidyl transferase FY138_18890 PF08323 Starch synthase catalytic domain FY138_18890 PF00534 Glycosyl transferases group 1 FY138_18895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY138_18895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY138_18895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY138_18895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY138_18900 PF00128 Alpha amylase, catalytic domain FY138_18900 PF18390 Glycogen debranching enzyme C-terminal domain FY138_18900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY138_18905 PF01575 MaoC like domain FY138_18930 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_18930 PF01571 Aminomethyltransferase folate-binding domain FY138_18930 PF17806 Sarcosine oxidase A3 domain FY138_18930 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY138_18945 PF01266 FAD dependent oxidoreductase FY138_18950 PF01165 Ribosomal protein S21 FY138_18965 PF11089 Exopolysaccharide production repressor FY138_18970 PF00535 Glycosyl transferase family 2 FY138_18975 PF04230 Polysaccharide pyruvyl transferase FY138_18980 PF00535 Glycosyl transferase family 2 FY138_18985 PF01943 Polysaccharide biosynthesis protein FY138_18990 PF01757 Acyltransferase family FY138_18995 PF00722 Glycosyl hydrolases family 16 FY138_19005 PF00535 Glycosyl transferase family 2 FY138_19010 PF00535 Glycosyl transferase family 2 FY138_19015 PF00535 Glycosyl transferase family 2 FY138_19020 PF00483 Nucleotidyl transferase FY138_19025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY138_19025 PF13807 G-rich domain on putative tyrosine kinase FY138_19025 PF02706 Chain length determinant protein FY138_19030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_19035 PF13426 PAS domain FY138_19035 PF00072 Response regulator receiver domain FY138_19050 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19055 PF00005 ABC transporter FY138_19055 PF00571 CBS domain FY138_19060 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_19060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY138_19065 PF01205 Uncharacterized protein family UPF0029 FY138_19070 PF00849 RNA pseudouridylate synthase FY138_19075 PF04445 Putative SAM-dependent methyltransferase FY138_19085 PF07995 Glucose / Sorbosone dehydrogenase FY138_19095 PF00072 Response regulator receiver domain FY138_19095 PF00196 Bacterial regulatory proteins, luxR family FY138_19100 PF07730 Histidine kinase FY138_19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_19105 PF13407 Periplasmic binding protein domain FY138_19110 PF00005 ABC transporter FY138_19115 PF02653 Branched-chain amino acid transport system / permease component FY138_19125 PF08450 SMP-30/Gluconolactonase/LRE-like region FY138_19130 PF02631 RecX family FY138_19135 PF00034 Cytochrome c FY138_19145 PF00005 ABC transporter FY138_19150 PF01032 FecCD transport family FY138_19160 PF00593 TonB dependent receptor FY138_19160 PF07715 TonB-dependent Receptor Plug Domain FY138_19165 PF03466 LysR substrate binding domain FY138_19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19175 PF08019 Phosphoethanolamine transferase EptA/EptB FY138_19175 PF00884 Sulfatase FY138_19180 PF00072 Response regulator receiver domain FY138_19180 PF00486 Transcriptional regulatory protein, C terminal FY138_19185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_19185 PF00512 His Kinase A (phospho-acceptor) domain FY138_19190 PF00083 Sugar (and other) transporter FY138_19195 PF11972 HTH DNA binding domain FY138_19195 PF07756 Protein of unknown function (DUF1612) FY138_19205 PF00672 HAMP domain FY138_19205 PF00211 Adenylate and Guanylate cyclase catalytic domain FY138_19215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_19215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_19220 PF00892 EamA-like transporter family FY138_19225 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY138_19230 PF00491 Arginase family FY138_19245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY138_19245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY138_19250 PF00202 Aminotransferase class-III FY138_19260 PF00155 Aminotransferase class I and II FY138_19265 PF06968 Biotin and Thiamin Synthesis associated domain FY138_19265 PF04055 Radical SAM superfamily FY138_19270 PF13673 Acetyltransferase (GNAT) domain FY138_19315 PF01569 PAP2 superfamily FY138_19320 PF00072 Response regulator receiver domain FY138_19320 PF00486 Transcriptional regulatory protein, C terminal FY138_19325 PF00672 HAMP domain FY138_19325 PF00512 His Kinase A (phospho-acceptor) domain FY138_19325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_19335 PF07690 Major Facilitator Superfamily FY138_19340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19340 PF03466 LysR substrate binding domain FY138_19360 PF07969 Amidohydrolase family FY138_19375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19380 PF03466 LysR substrate binding domain FY138_19385 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY138_19395 PF07690 Major Facilitator Superfamily FY138_19400 PF03466 LysR substrate binding domain FY138_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19410 PF00535 Glycosyl transferase family 2 FY138_19420 PF03275 UDP-galactopyranose mutase FY138_19430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_19430 PF00672 HAMP domain FY138_19445 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19450 PF00005 ABC transporter FY138_19460 PF04303 PrpF protein FY138_19465 PF03466 LysR substrate binding domain FY138_19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19470 PF01047 MarR family FY138_19500 PF00440 Bacterial regulatory proteins, tetR family FY138_19505 PF02311 AraC-like ligand binding domain FY138_19505 PF12833 Helix-turn-helix domain FY138_19520 PF13533 Biotin-lipoyl like FY138_19535 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19540 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_19550 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19555 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19555 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_19560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_19560 PF00005 ABC transporter FY138_19600 PF01979 Amidohydrolase family FY138_19605 PF01979 Amidohydrolase family FY138_19610 PF00221 Aromatic amino acid lyase FY138_19620 PF17391 Urocanase N-terminal domain FY138_19620 PF17392 Urocanase C-terminal domain FY138_19620 PF01175 Urocanase Rossmann-like domain FY138_19625 PF05962 HutD FY138_19630 PF07364 Metallopeptidase family M81 FY138_19630 PF07171 MlrC C-terminus FY138_19635 PF14031 Putative serine dehydratase domain FY138_19635 PF01168 Alanine racemase, N-terminal domain FY138_19640 PF01042 Endoribonuclease L-PSP FY138_19650 PF13614 AAA domain FY138_19655 PF02195 ParB-like nuclease domain FY138_19655 PF07506 RepB plasmid partitioning protein FY138_19660 PF03428 Replication protein C N-terminal domain FY138_19660 PF11800 Replication protein C C-terminal region FY138_19675 PF06772 Bacterial low temperature requirement A protein (LtrA) FY138_19680 PF02885 Glycosyl transferase family, helical bundle domain FY138_19680 PF00591 Glycosyl transferase family, a/b domain FY138_19685 PF00593 TonB dependent receptor FY138_19685 PF07715 TonB-dependent Receptor Plug Domain FY138_19690 PF00376 MerR family regulatory protein FY138_19690 PF09278 MerR, DNA binding FY138_19695 PF00128 Alpha amylase, catalytic domain FY138_19695 PF02806 Alpha amylase, C-terminal all-beta domain FY138_19700 PF02785 Biotin carboxylase C-terminal domain FY138_19700 PF00364 Biotin-requiring enzyme FY138_19700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_19700 PF00289 Biotin carboxylase, N-terminal domain FY138_19705 PF02682 Carboxyltransferase domain, subdomain C and D FY138_19710 PF07286 Protein of unknown function (DUF1445) FY138_19715 PF03746 LamB/YcsF family FY138_19720 PF01566 Natural resistance-associated macrophage protein FY138_19725 PF07729 FCD domain FY138_19725 PF00392 Bacterial regulatory proteins, gntR family FY138_19730 PF08376 Nitrate and nitrite sensing FY138_19730 PF03861 ANTAR domain FY138_19745 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19750 PF00005 ABC transporter FY138_19755 PF04324 BFD-like [2Fe-2S] binding domain FY138_19755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY138_19755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY138_19755 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_19755 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY138_19765 PF04324 BFD-like [2Fe-2S] binding domain FY138_19765 PF00384 Molybdopterin oxidoreductase FY138_19765 PF01568 Molydopterin dinucleotide binding domain FY138_19765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY138_19770 PF10414 Sirohaem synthase dimerisation region FY138_19770 PF14824 Sirohaem biosynthesis protein central FY138_19770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY138_19775 PF08220 DeoR-like helix-turn-helix domain FY138_19775 PF00455 DeoR C terminal sensor domain FY138_19780 PF01266 FAD dependent oxidoreductase FY138_19780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY138_19785 PF17912 MalK OB fold domain FY138_19785 PF00005 ABC transporter FY138_19790 PF00005 ABC transporter FY138_19790 PF17912 MalK OB fold domain FY138_19795 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19800 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_19815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19820 PF03466 LysR substrate binding domain FY138_19825 PF13593 SBF-like CPA transporter family (DUF4137) FY138_19830 PF00011 Hsp20/alpha crystallin family FY138_19845 PF00459 Inositol monophosphatase family FY138_19855 PF00072 Response regulator receiver domain FY138_19875 PF13407 Periplasmic binding protein domain FY138_19880 PF00005 ABC transporter FY138_19885 PF02653 Branched-chain amino acid transport system / permease component FY138_19895 PF00248 Aldo/keto reductase family FY138_19900 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY138_19900 PF01266 FAD dependent oxidoreductase FY138_19905 PF01791 DeoC/LacD family aldolase FY138_19910 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY138_19910 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY138_19915 PF00672 HAMP domain FY138_19915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_19920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19920 PF03466 LysR substrate binding domain FY138_19925 PF00300 Histidine phosphatase superfamily (branch 1) FY138_19925 PF00106 short chain dehydrogenase FY138_19930 PF00155 Aminotransferase class I and II FY138_19935 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19940 PF00528 Binding-protein-dependent transport system inner membrane component FY138_19950 PF00005 ABC transporter FY138_19950 PF08402 TOBE domain FY138_19955 PF03746 LamB/YcsF family FY138_19960 PF02626 Carboxyltransferase domain, subdomain A and B FY138_19965 PF02682 Carboxyltransferase domain, subdomain C and D FY138_19975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_19975 PF00289 Biotin carboxylase, N-terminal domain FY138_19975 PF02785 Biotin carboxylase C-terminal domain FY138_19980 PF00364 Biotin-requiring enzyme FY138_19985 PF00892 EamA-like transporter family FY138_19990 PF00892 EamA-like transporter family FY138_19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_19995 PF03466 LysR substrate binding domain FY138_20000 PF03401 Tripartite tricarboxylate transporter family receptor FY138_20005 PF03737 Aldolase/RraA FY138_20015 PF01970 Tripartite tricarboxylate transporter TctA family FY138_20020 PF01370 NAD dependent epimerase/dehydratase family FY138_20030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_20030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_20035 PF00106 short chain dehydrogenase FY138_20040 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20045 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20050 PF00005 ABC transporter FY138_20055 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_20060 PF03737 Aldolase/RraA FY138_20065 PF00107 Zinc-binding dehydrogenase FY138_20065 PF08240 Alcohol dehydrogenase GroES-like domain FY138_20080 PF01070 FMN-dependent dehydrogenase FY138_20085 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY138_20085 PF00132 Bacterial transferase hexapeptide (six repeats) FY138_20085 PF14602 Hexapeptide repeat of succinyl-transferase FY138_20095 PF01547 Bacterial extracellular solute-binding protein FY138_20105 PF17912 MalK OB fold domain FY138_20105 PF00005 ABC transporter FY138_20105 PF03459 TOBE domain FY138_20110 PF07470 Glycosyl Hydrolase Family 88 FY138_20115 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20120 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20135 PF00392 Bacterial regulatory proteins, gntR family FY138_20135 PF07729 FCD domain FY138_20140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_20140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_20145 PF00005 ABC transporter FY138_20145 PF12848 ABC transporter FY138_20155 PF08379 Bacterial transglutaminase-like N-terminal region FY138_20155 PF01841 Transglutaminase-like superfamily FY138_20160 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY138_20160 PF14403 Circularly permuted ATP-grasp type 2 FY138_20180 PF03061 Thioesterase superfamily FY138_20195 PF00392 Bacterial regulatory proteins, gntR family FY138_20195 PF07729 FCD domain FY138_20200 PF00465 Iron-containing alcohol dehydrogenase FY138_20205 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY138_20215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_20220 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20225 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_20225 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20230 PF00005 ABC transporter FY138_20230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_20235 PF00701 Dihydrodipicolinate synthetase family FY138_20270 PF00145 C-5 cytosine-specific DNA methylase FY138_20280 PF02796 Helix-turn-helix domain of resolvase FY138_20280 PF00239 Resolvase, N terminal domain FY138_20300 PF01261 Xylose isomerase-like TIM barrel FY138_20305 PF01261 Xylose isomerase-like TIM barrel FY138_20310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_20310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_20315 PF01261 Xylose isomerase-like TIM barrel FY138_20320 PF00005 ABC transporter FY138_20325 PF02653 Branched-chain amino acid transport system / permease component FY138_20335 PF00356 Bacterial regulatory proteins, lacI family FY138_20340 PF00221 Aromatic amino acid lyase FY138_20345 PF00005 ABC transporter FY138_20345 PF00571 CBS domain FY138_20350 PF00528 Binding-protein-dependent transport system inner membrane component FY138_20365 PF00392 Bacterial regulatory proteins, gntR family FY138_20365 PF07702 UTRA domain FY138_20375 PF00529 HlyD membrane-fusion protein of T1SS FY138_20375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_20385 PF00873 AcrB/AcrD/AcrF family FY138_20390 PF00392 Bacterial regulatory proteins, gntR family FY138_20390 PF07729 FCD domain FY138_20395 PF00206 Lyase FY138_20395 PF10415 Fumarase C C-terminus FY138_20400 PF00324 Amino acid permease FY138_20405 PF00710 Asparaginase, N-terminal FY138_20405 PF17763 Glutaminase/Asparaginase C-terminal domain FY138_20415 PF03814 Potassium-transporting ATPase A subunit FY138_20425 PF02669 K+-transporting ATPase, c chain FY138_20430 PF13493 Domain of unknown function (DUF4118) FY138_20430 PF13492 GAF domain FY138_20430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_20430 PF00512 His Kinase A (phospho-acceptor) domain FY138_20430 PF02702 Osmosensitive K+ channel His kinase sensor domain FY138_20435 PF00072 Response regulator receiver domain FY138_20435 PF00486 Transcriptional regulatory protein, C terminal FY138_20440 PF01212 Beta-eliminating lyase FY138_20445 PF00310 Glutamine amidotransferases class-II FY138_20445 PF01645 Conserved region in glutamate synthase FY138_20445 PF04898 Glutamate synthase central domain FY138_20445 PF01493 GXGXG motif FY138_20455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY138_20455 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_20460 PF00512 His Kinase A (phospho-acceptor) domain FY138_20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_20460 PF00672 HAMP domain FY138_20465 PF00486 Transcriptional regulatory protein, C terminal FY138_20465 PF00072 Response regulator receiver domain FY138_20475 PF13406 Transglycosylase SLT domain FY138_20480 PF00483 Nucleotidyl transferase FY138_20495 PF00571 CBS domain FY138_20495 PF01380 SIS domain FY138_20505 PF16200 C-terminal region of band_7 FY138_20505 PF01145 SPFH domain / Band 7 family FY138_20510 PF00762 Ferrochelatase FY138_20515 PF00149 Calcineurin-like phosphoesterase FY138_20515 PF02872 5'-nucleotidase, C-terminal domain FY138_20525 PF03435 Saccharopine dehydrogenase NADP binding domain FY138_20525 PF16653 Saccharopine dehydrogenase C-terminal domain FY138_20530 PF00990 Diguanylate cyclase, GGDEF domain FY138_20535 PF01063 Amino-transferase class IV FY138_20540 PF08439 Oligopeptidase F FY138_20540 PF01432 Peptidase family M3 FY138_20545 PF00158 Sigma-54 interaction domain FY138_20545 PF00072 Response regulator receiver domain FY138_20545 PF02954 Bacterial regulatory protein, Fis family FY138_20550 PF05951 Bacterial protein of unknown function (DUF882) FY138_20555 PF02887 Pyruvate kinase, alpha/beta domain FY138_20555 PF00224 Pyruvate kinase, barrel domain FY138_20575 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY138_20585 PF00444 Ribosomal protein L36 FY138_20590 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY138_20590 PF02222 ATP-grasp domain FY138_20595 PF00731 AIR carboxylase FY138_20625 PF00459 Inositol monophosphatase family FY138_20635 PF00691 OmpA family FY138_20635 PF01389 OmpA-like transmembrane domain FY138_20640 PF00890 FAD binding domain FY138_20645 PF00005 ABC transporter FY138_20645 PF00664 ABC transporter transmembrane region FY138_20650 PF01197 Ribosomal protein L31 FY138_20670 PF00274 Fructose-bisphosphate aldolase class-I FY138_20675 PF00162 Phosphoglycerate kinase FY138_20680 PF00999 Sodium/hydrogen exchanger family FY138_20680 PF03471 Transporter associated domain FY138_20690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY138_20690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY138_20695 PF02779 Transketolase, pyrimidine binding domain FY138_20695 PF02780 Transketolase, C-terminal domain FY138_20695 PF00456 Transketolase, thiamine diphosphate binding domain FY138_20715 PF00571 CBS domain FY138_20715 PF03471 Transporter associated domain FY138_20715 PF01595 Cyclin M transmembrane N-terminal domain FY138_20725 PF13277 YmdB-like protein FY138_20740 PF01709 Transcriptional regulator FY138_20745 PF00296 Luciferase-like monooxygenase FY138_20750 PF00672 HAMP domain FY138_20750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_20755 PF02075 Crossover junction endodeoxyribonuclease RuvC FY138_20760 PF07499 RuvA, C-terminal domain FY138_20760 PF01330 RuvA N terminal domain FY138_20765 PF17864 RuvB AAA lid domain FY138_20765 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY138_20765 PF05491 RuvB C-terminal winged helix domain FY138_20780 PF00293 NUDIX domain FY138_20785 PF00293 NUDIX domain FY138_20790 PF03061 Thioesterase superfamily FY138_20795 PF01618 MotA/TolQ/ExbB proton channel family FY138_20800 PF02472 Biopolymer transport protein ExbD/TolR FY138_20810 PF07676 WD40-like Beta Propeller Repeat FY138_20810 PF04052 TolB amino-terminal domain FY138_20815 PF00691 OmpA family FY138_20825 PF01171 PP-loop family FY138_20830 PF06480 FtsH Extracellular FY138_20830 PF17862 AAA+ lid domain FY138_20830 PF00004 ATPase family associated with various cellular activities (AAA) FY138_20830 PF01434 Peptidase family M41 FY138_20835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY138_20835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY138_20835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY138_20835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY138_20840 PF13505 Outer membrane protein beta-barrel domain FY138_20850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_20850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_20850 PF01842 ACT domain FY138_20885 PF00085 Thioredoxin FY138_20895 PF03966 Trm112p-like protein FY138_20900 PF00207 Alpha-2-macroglobulin family FY138_20900 PF07678 A-macroglobulin TED domain FY138_20900 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY138_20900 PF01835 MG2 domain FY138_20900 PF17962 Bacterial macroglobulin domain 6 FY138_20900 PF07703 Alpha-2-macroglobulin bait region domain FY138_20900 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY138_20900 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY138_20900 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY138_20905 PF06832 Penicillin-Binding Protein C-terminus Family FY138_20905 PF00912 Transglycosylase FY138_20905 PF00905 Penicillin binding protein transpeptidase domain FY138_20915 PF01546 Peptidase family M20/M25/M40 FY138_20915 PF07687 Peptidase dimerisation domain FY138_20920 PF00768 D-alanyl-D-alanine carboxypeptidase FY138_20920 PF07943 Penicillin-binding protein 5, C-terminal domain FY138_20925 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY138_20925 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY138_20930 PF00581 Rhodanese-like domain FY138_20930 PF01206 Sulfurtransferase TusA FY138_20935 PF03734 L,D-transpeptidase catalytic domain FY138_20940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY138_20945 PF02899 Phage integrase, N-terminal SAM-like domain FY138_20945 PF00589 Phage integrase family FY138_20955 PF01202 Shikimate kinase FY138_20960 PF01761 3-dehydroquinate synthase FY138_20970 PF01722 BolA-like protein FY138_20975 PF00226 DnaJ domain FY138_20980 PF08406 CbbQ/NirQ/NorQ C-terminal FY138_20980 PF07728 AAA domain (dynein-related subfamily) FY138_20980 PF12556 Cobaltochelatase CobS subunit N terminal FY138_20985 PF06213 Cobalamin biosynthesis protein CobT FY138_20985 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY138_21000 PF02592 Putative vitamin uptake transporter FY138_21005 PF00830 Ribosomal L28 family FY138_21025 PF00753 Metallo-beta-lactamase superfamily FY138_21025 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY138_21030 PF01209 ubiE/COQ5 methyltransferase family FY138_21035 PF00155 Aminotransferase class I and II FY138_21040 PF02153 Prephenate dehydrogenase FY138_21050 PF04752 ChaC-like protein FY138_21070 PF00005 ABC transporter FY138_21080 PF00156 Phosphoribosyl transferase domain FY138_21085 PF00072 Response regulator receiver domain FY138_21095 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY138_21095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY138_21105 PF00206 Lyase FY138_21105 PF14698 Argininosuccinate lyase C-terminal FY138_21110 PF08534 Redoxin FY138_21120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY138_21120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY138_21125 PF01012 Electron transfer flavoprotein domain FY138_21125 PF00766 Electron transfer flavoprotein FAD-binding domain FY138_21130 PF01012 Electron transfer flavoprotein domain FY138_21140 PF01923 Cobalamin adenosyltransferase FY138_21150 PF00106 short chain dehydrogenase FY138_21160 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY138_21165 PF02805 Metal binding domain of Ada FY138_21165 PF06029 AlkA N-terminal domain FY138_21165 PF00730 HhH-GPD superfamily base excision DNA repair protein FY138_21165 PF12833 Helix-turn-helix domain FY138_21170 PF09856 Predicted transcriptional regulator (DUF2083) FY138_21170 PF06114 IrrE N-terminal-like domain FY138_21170 PF01381 Helix-turn-helix FY138_21175 PF01039 Carboxyl transferase domain FY138_21180 PF02798 Glutathione S-transferase, N-terminal domain FY138_21195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_21195 PF18140 Propionyl-coenzyme A carboxylase BT domain FY138_21195 PF02785 Biotin carboxylase C-terminal domain FY138_21195 PF00289 Biotin carboxylase, N-terminal domain FY138_21195 PF00364 Biotin-requiring enzyme FY138_21200 PF02310 B12 binding domain FY138_21200 PF01642 Methylmalonyl-CoA mutase FY138_21210 PF01266 FAD dependent oxidoreductase FY138_21210 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY138_21220 PF13407 Periplasmic binding protein domain FY138_21225 PF02653 Branched-chain amino acid transport system / permease component FY138_21230 PF00005 ABC transporter FY138_21235 PF08267 Cobalamin-independent synthase, N-terminal domain FY138_21235 PF01717 Cobalamin-independent synthase, Catalytic domain FY138_21245 PF01381 Helix-turn-helix FY138_21260 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY138_21285 PF00480 ROK family FY138_21285 PF01047 MarR family FY138_21295 PF00528 Binding-protein-dependent transport system inner membrane component FY138_21300 PF00528 Binding-protein-dependent transport system inner membrane component FY138_21305 PF17912 MalK OB fold domain FY138_21305 PF00005 ABC transporter FY138_21305 PF03459 TOBE domain FY138_21310 PF03009 Glycerophosphoryl diester phosphodiesterase family FY138_21320 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY138_21320 PF00722 Glycosyl hydrolases family 16 FY138_21325 PF03449 Transcription elongation factor, N-terminal FY138_21325 PF01272 Transcription elongation factor, GreA/GreB, C-term FY138_21340 PF00534 Glycosyl transferases group 1 FY138_21340 PF13439 Glycosyltransferase Family 4 FY138_21345 PF00534 Glycosyl transferases group 1 FY138_21345 PF13439 Glycosyltransferase Family 4 FY138_21365 PF13807 G-rich domain on putative tyrosine kinase FY138_21365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY138_21365 PF02706 Chain length determinant protein FY138_21375 PF01757 Acyltransferase family FY138_21390 PF01943 Polysaccharide biosynthesis protein FY138_21450 PF01757 Acyltransferase family FY138_21455 PF00892 EamA-like transporter family FY138_21460 PF01043 SecA preprotein cross-linking domain FY138_21460 PF02810 SEC-C motif FY138_21460 PF07517 SecA DEAD-like domain FY138_21460 PF07516 SecA Wing and Scaffold domain FY138_21470 PF01960 ArgJ family FY138_21475 PF00583 Acetyltransferase (GNAT) family FY138_21475 PF13508 Acetyltransferase (GNAT) domain FY138_21480 PF00293 NUDIX domain FY138_21495 PF08241 Methyltransferase domain FY138_21505 PF00462 Glutaredoxin FY138_21510 PF00795 Carbon-nitrogen hydrolase FY138_21520 PF08241 Methyltransferase domain FY138_21535 PF00378 Enoyl-CoA hydratase/isomerase FY138_21545 PF00528 Binding-protein-dependent transport system inner membrane component FY138_21550 PF00528 Binding-protein-dependent transport system inner membrane component FY138_21555 PF00005 ABC transporter FY138_21560 PF08713 DNA alkylation repair enzyme FY138_21565 PF00171 Aldehyde dehydrogenase family FY138_21575 PF00563 EAL domain FY138_21575 PF08447 PAS fold FY138_21575 PF08448 PAS fold FY138_21575 PF00990 Diguanylate cyclase, GGDEF domain FY138_21585 PF00561 alpha/beta hydrolase fold FY138_21595 PF05336 L-rhamnose mutarotase FY138_21600 PF02653 Branched-chain amino acid transport system / permease component FY138_21605 PF02653 Branched-chain amino acid transport system / permease component FY138_21610 PF00005 ABC transporter FY138_21615 PF13407 Periplasmic binding protein domain FY138_21620 PF08220 DeoR-like helix-turn-helix domain FY138_21620 PF00455 DeoR C terminal sensor domain FY138_21625 PF00596 Class II Aldolase and Adducin N-terminal domain FY138_21630 PF01261 Xylose isomerase-like TIM barrel FY138_21635 PF02548 Ketopantoate hydroxymethyltransferase FY138_21640 PF02569 Pantoate-beta-alanine ligase FY138_21650 PF00682 HMGL-like FY138_21655 PF02785 Biotin carboxylase C-terminal domain FY138_21655 PF00289 Biotin carboxylase, N-terminal domain FY138_21655 PF00364 Biotin-requiring enzyme FY138_21655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_21660 PF01039 Carboxyl transferase domain FY138_21665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_21665 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_21665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_21670 PF01037 Lrp/AsnC ligand binding domain FY138_21675 PF00108 Thiolase, N-terminal domain FY138_21675 PF02803 Thiolase, C-terminal domain FY138_21680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_21680 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_21680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_21685 PF00676 Dehydrogenase E1 component FY138_21685 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY138_21690 PF02779 Transketolase, pyrimidine binding domain FY138_21690 PF02780 Transketolase, C-terminal domain FY138_21695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY138_21695 PF00364 Biotin-requiring enzyme FY138_21695 PF02817 e3 binding domain FY138_21700 PF01676 Metalloenzyme superfamily FY138_21700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY138_21710 PF04143 Sulphur transport FY138_21720 PF04273 Putative phosphatase (DUF442) FY138_21720 PF00753 Metallo-beta-lactamase superfamily FY138_21730 PF00106 short chain dehydrogenase FY138_21735 PF00561 alpha/beta hydrolase fold FY138_21745 PF00392 Bacterial regulatory proteins, gntR family FY138_21745 PF07729 FCD domain FY138_21755 PF00528 Binding-protein-dependent transport system inner membrane component FY138_21760 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_21760 PF00528 Binding-protein-dependent transport system inner membrane component FY138_21765 PF00005 ABC transporter FY138_21765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_21770 PF00005 ABC transporter FY138_21770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_21900 PF04233 Phage Mu protein F like protein FY138_21905 PF06074 Protein of unknown function (DUF935) FY138_21910 PF03237 Terminase-like family FY138_22030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22040 PF13378 Enolase C-terminal domain-like FY138_22040 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_22045 PF00106 short chain dehydrogenase FY138_22050 PF01638 HxlR-like helix-turn-helix FY138_22060 PF00296 Luciferase-like monooxygenase FY138_22065 PF00296 Luciferase-like monooxygenase FY138_22075 PF05368 NmrA-like family FY138_22080 PF00296 Luciferase-like monooxygenase FY138_22085 PF07687 Peptidase dimerisation domain FY138_22085 PF01546 Peptidase family M20/M25/M40 FY138_22090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22110 PF00296 Luciferase-like monooxygenase FY138_22115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_22115 PF03466 LysR substrate binding domain FY138_22125 PF00248 Aldo/keto reductase family FY138_22130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_22130 PF00005 ABC transporter FY138_22135 PF00005 ABC transporter FY138_22135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_22140 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22145 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_22160 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_22160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_22165 PF00296 Luciferase-like monooxygenase FY138_22175 PF00581 Rhodanese-like domain FY138_22190 PF00296 Luciferase-like monooxygenase FY138_22195 PF01613 Flavin reductase like domain FY138_22205 PF02082 Transcriptional regulator FY138_22210 PF00296 Luciferase-like monooxygenase FY138_22215 PF00296 Luciferase-like monooxygenase FY138_22220 PF01546 Peptidase family M20/M25/M40 FY138_22220 PF07687 Peptidase dimerisation domain FY138_22230 PF00005 ABC transporter FY138_22235 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_22245 PF03466 LysR substrate binding domain FY138_22245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_22255 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_22255 PF04324 BFD-like [2Fe-2S] binding domain FY138_22260 PF01266 FAD dependent oxidoreductase FY138_22265 PF01266 FAD dependent oxidoreductase FY138_22270 PF01037 Lrp/AsnC ligand binding domain FY138_22275 PF00005 ABC transporter FY138_22275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_22280 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_22280 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22285 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22300 PF00202 Aminotransferase class-III FY138_22315 PF01266 FAD dependent oxidoreductase FY138_22320 PF00171 Aldehyde dehydrogenase family FY138_22325 PF00180 Isocitrate/isopropylmalate dehydrogenase FY138_22330 PF00171 Aldehyde dehydrogenase family FY138_22340 PF01968 Hydantoinase/oxoprolinase FY138_22340 PF05378 Hydantoinase/oxoprolinase N-terminal region FY138_22355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_22360 PF01546 Peptidase family M20/M25/M40 FY138_22360 PF07687 Peptidase dimerisation domain FY138_22375 PF01032 FecCD transport family FY138_22380 PF00005 ABC transporter FY138_22385 PF00127 Copper binding proteins, plastocyanin/azurin family FY138_22390 PF01209 ubiE/COQ5 methyltransferase family FY138_22405 PF01032 FecCD transport family FY138_22410 PF00005 ABC transporter FY138_22415 PF04542 Sigma-70 region 2 FY138_22415 PF12680 SnoaL-like domain FY138_22415 PF08281 Sigma-70, region 4 FY138_22435 PF00005 ABC transporter FY138_22435 PF00664 ABC transporter transmembrane region FY138_22440 PF00529 HlyD membrane-fusion protein of T1SS FY138_22440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_22450 PF07729 FCD domain FY138_22450 PF00392 Bacterial regulatory proteins, gntR family FY138_22455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_22455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_22460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_22460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_22465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_22465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_22475 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22480 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22485 PF03459 TOBE domain FY138_22485 PF17912 MalK OB fold domain FY138_22485 PF00005 ABC transporter FY138_22490 PF00920 Dehydratase family FY138_22495 PF01370 NAD dependent epimerase/dehydratase family FY138_22500 PF03737 Aldolase/RraA FY138_22505 PF00196 Bacterial regulatory proteins, luxR family FY138_22505 PF00072 Response regulator receiver domain FY138_22510 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22515 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_22515 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22520 PF00005 ABC transporter FY138_22520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_22535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22550 PF01112 Asparaginase FY138_22555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_22555 PF03466 LysR substrate binding domain FY138_22560 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22565 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22565 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_22570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_22570 PF00005 ABC transporter FY138_22580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_22585 PF01546 Peptidase family M20/M25/M40 FY138_22595 PF13407 Periplasmic binding protein domain FY138_22600 PF00005 ABC transporter FY138_22605 PF02653 Branched-chain amino acid transport system / permease component FY138_22610 PF07722 Peptidase C26 FY138_22615 PF03480 Bacterial extracellular solute-binding protein, family 7 FY138_22620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY138_22625 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY138_22640 PF01266 FAD dependent oxidoreductase FY138_22645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_22645 PF08447 PAS fold FY138_22645 PF13426 PAS domain FY138_22650 PF00296 Luciferase-like monooxygenase FY138_22655 PF03972 MmgE/PrpD family FY138_22660 PF00005 ABC transporter FY138_22665 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22670 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22675 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_22680 PF03949 Malic enzyme, NAD binding domain FY138_22680 PF01515 Phosphate acetyl/butaryl transferase FY138_22680 PF00390 Malic enzyme, N-terminal domain FY138_22685 PF03466 LysR substrate binding domain FY138_22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_22690 PF01011 PQQ enzyme repeat FY138_22695 PF00483 Nucleotidyl transferase FY138_22695 PF01050 Mannose-6-phosphate isomerase FY138_22705 PF01547 Bacterial extracellular solute-binding protein FY138_22710 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22715 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22720 PF17912 MalK OB fold domain FY138_22720 PF00005 ABC transporter FY138_22730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_22730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_22735 PF06508 Queuosine biosynthesis protein QueC FY138_22740 PF01242 6-pyruvoyl tetrahydropterin synthase FY138_22745 PF04055 Radical SAM superfamily FY138_22750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_22750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_22760 PF03459 TOBE domain FY138_22760 PF00005 ABC transporter FY138_22760 PF17912 MalK OB fold domain FY138_22765 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22770 PF00528 Binding-protein-dependent transport system inner membrane component FY138_22775 PF01547 Bacterial extracellular solute-binding protein FY138_22780 PF00356 Bacterial regulatory proteins, lacI family FY138_22795 PF02245 Methylpurine-DNA glycosylase (MPG) FY138_22815 PF03734 L,D-transpeptidase catalytic domain FY138_22815 PF17969 L,D-transpeptidase C-terminal domain FY138_22820 PF00672 HAMP domain FY138_22820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_22825 PF00202 Aminotransferase class-III FY138_22835 PF02397 Bacterial sugar transferase FY138_22840 PF02563 Polysaccharide biosynthesis/export protein FY138_22855 PF00529 HlyD membrane-fusion protein of T1SS FY138_22860 PF00664 ABC transporter transmembrane region FY138_22860 PF00005 ABC transporter FY138_22875 PF00072 Response regulator receiver domain FY138_22875 PF00196 Bacterial regulatory proteins, luxR family FY138_22885 PF01370 NAD dependent epimerase/dehydratase family FY138_22890 PF16363 GDP-mannose 4,6 dehydratase FY138_22920 PF07238 PilZ domain FY138_22920 PF03552 Cellulose synthase FY138_22920 PF00535 Glycosyl transferase family 2 FY138_22930 PF01270 Glycosyl hydrolases family 8 FY138_22940 PF07687 Peptidase dimerisation domain FY138_22940 PF01546 Peptidase family M20/M25/M40 FY138_22955 PF00202 Aminotransferase class-III FY138_22960 PF00375 Sodium:dicarboxylate symporter family FY138_22965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_22965 PF02743 Cache domain FY138_22965 PF00512 His Kinase A (phospho-acceptor) domain FY138_22970 PF00158 Sigma-54 interaction domain FY138_22970 PF02954 Bacterial regulatory protein, Fis family FY138_22970 PF00072 Response regulator receiver domain FY138_22985 PF01266 FAD dependent oxidoreductase FY138_22990 PF01168 Alanine racemase, N-terminal domain FY138_22990 PF00842 Alanine racemase, C-terminal domain FY138_22995 PF01037 Lrp/AsnC ligand binding domain FY138_23000 PF08543 Phosphomethylpyrimidine kinase FY138_23005 PF02581 Thiamine monophosphate synthase FY138_23010 PF02110 Hydroxyethylthiazole kinase family FY138_23015 PF09084 NMT1/THI5 like FY138_23020 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23030 PF01055 Glycosyl hydrolases family 31 FY138_23035 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23040 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23045 PF01547 Bacterial extracellular solute-binding protein FY138_23050 PF00005 ABC transporter FY138_23050 PF08402 TOBE domain FY138_23055 PF07702 UTRA domain FY138_23055 PF00392 Bacterial regulatory proteins, gntR family FY138_23060 PF00296 Luciferase-like monooxygenase FY138_23065 PF00248 Aldo/keto reductase family FY138_23070 PF01613 Flavin reductase like domain FY138_23085 PF00873 AcrB/AcrD/AcrF family FY138_23090 PF13533 Biotin-lipoyl like FY138_23095 PF02563 Polysaccharide biosynthesis/export protein FY138_23100 PF13439 Glycosyltransferase Family 4 FY138_23100 PF00534 Glycosyl transferases group 1 FY138_23105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_23110 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23115 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_23115 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23120 PF01979 Amidohydrolase family FY138_23135 PF03841 L-seryl-tRNA selenium transferase FY138_23140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_23140 PF00005 ABC transporter FY138_23145 PF02798 Glutathione S-transferase, N-terminal domain FY138_23145 PF00043 Glutathione S-transferase, C-terminal domain FY138_23160 PF00296 Luciferase-like monooxygenase FY138_23165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY138_23165 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY138_23170 PF03480 Bacterial extracellular solute-binding protein, family 7 FY138_23180 PF00171 Aldehyde dehydrogenase family FY138_23190 PF03786 D-mannonate dehydratase (UxuA) FY138_23195 PF08240 Alcohol dehydrogenase GroES-like domain FY138_23195 PF00107 Zinc-binding dehydrogenase FY138_23200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY138_23210 PF03480 Bacterial extracellular solute-binding protein, family 7 FY138_23215 PF07729 FCD domain FY138_23215 PF00392 Bacterial regulatory proteins, gntR family FY138_23220 PF13419 Haloacid dehalogenase-like hydrolase FY138_23225 PF05209 Septum formation inhibitor MinC, N-terminal domain FY138_23225 PF03775 Septum formation inhibitor MinC, C-terminal domain FY138_23230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY138_23235 PF03776 Septum formation topological specificity factor MinE FY138_23240 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_23250 PF00563 EAL domain FY138_23250 PF00990 Diguanylate cyclase, GGDEF domain FY138_23250 PF08447 PAS fold FY138_23250 PF08448 PAS fold FY138_23255 PF01425 Amidase FY138_23265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_23275 PF01547 Bacterial extracellular solute-binding protein FY138_23280 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23285 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23290 PF03459 TOBE domain FY138_23290 PF00005 ABC transporter FY138_23290 PF17912 MalK OB fold domain FY138_23300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_23300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_23310 PF05161 MOFRL family FY138_23310 PF13660 Domain of unknown function (DUF4147) FY138_23330 PF14579 Helix-hairpin-helix motif FY138_23330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY138_23330 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY138_23330 PF02811 PHP domain FY138_23330 PF01336 OB-fold nucleic acid binding domain FY138_23335 PF13847 Methyltransferase domain FY138_23345 PF07690 Major Facilitator Superfamily FY138_23350 PF00392 Bacterial regulatory proteins, gntR family FY138_23350 PF07729 FCD domain FY138_23355 PF02653 Branched-chain amino acid transport system / permease component FY138_23360 PF02653 Branched-chain amino acid transport system / permease component FY138_23365 PF00005 ABC transporter FY138_23370 PF13407 Periplasmic binding protein domain FY138_23375 PF00920 Dehydratase family FY138_23385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_23390 PF12833 Helix-turn-helix domain FY138_23400 PF00266 Aminotransferase class-V FY138_23405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_23405 PF00005 ABC transporter FY138_23410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_23410 PF00005 ABC transporter FY138_23415 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23420 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_23430 PF01580 FtsK/SpoIIIE family FY138_23430 PF09397 Ftsk gamma domain FY138_23430 PF17854 FtsK alpha domain FY138_23430 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY138_23435 PF02615 Malate/L-lactate dehydrogenase FY138_23440 PF00990 Diguanylate cyclase, GGDEF domain FY138_23440 PF08447 PAS fold FY138_23440 PF00563 EAL domain FY138_23440 PF08448 PAS fold FY138_23450 PF07883 Cupin domain FY138_23450 PF05899 Protein of unknown function (DUF861) FY138_23455 PF17151 Periplasmic sensor domain FY138_23455 PF00990 Diguanylate cyclase, GGDEF domain FY138_23460 PF00529 HlyD membrane-fusion protein of T1SS FY138_23460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_23465 PF00873 AcrB/AcrD/AcrF family FY138_23470 PF08361 MAATS-type transcriptional repressor, C-terminal region FY138_23470 PF00440 Bacterial regulatory proteins, tetR family FY138_23475 PF00005 ABC transporter FY138_23480 PF02653 Branched-chain amino acid transport system / permease component FY138_23485 PF13407 Periplasmic binding protein domain FY138_23490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_23490 PF03466 LysR substrate binding domain FY138_23495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY138_23495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY138_23515 PF03922 OmpW family FY138_23525 PF00005 ABC transporter FY138_23525 PF08402 TOBE domain FY138_23530 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23535 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23540 PF13416 Bacterial extracellular solute-binding protein FY138_23545 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY138_23545 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY138_23560 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY138_23560 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY138_23565 PF00005 ABC transporter FY138_23570 PF00950 ABC 3 transport family FY138_23575 PF01297 Zinc-uptake complex component A periplasmic FY138_23580 PF00583 Acetyltransferase (GNAT) family FY138_23595 PF01053 Cys/Met metabolism PLP-dependent enzyme FY138_23600 PF01547 Bacterial extracellular solute-binding protein FY138_23605 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23610 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23615 PF17912 MalK OB fold domain FY138_23615 PF00005 ABC transporter FY138_23620 PF08402 TOBE domain FY138_23620 PF00005 ABC transporter FY138_23625 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23630 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23635 PF08013 Tagatose 6 phosphate kinase FY138_23640 PF00294 pfkB family carbohydrate kinase FY138_23655 PF08240 Alcohol dehydrogenase GroES-like domain FY138_23655 PF16912 Glucose dehydrogenase C-terminus FY138_23660 PF00356 Bacterial regulatory proteins, lacI family FY138_23665 PF07690 Major Facilitator Superfamily FY138_23670 PF12833 Helix-turn-helix domain FY138_23670 PF02311 AraC-like ligand binding domain FY138_23685 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23690 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23695 PF17912 MalK OB fold domain FY138_23695 PF00005 ABC transporter FY138_23700 PF00248 Aldo/keto reductase family FY138_23715 PF00392 Bacterial regulatory proteins, gntR family FY138_23715 PF07729 FCD domain FY138_23720 PF01370 NAD dependent epimerase/dehydratase family FY138_23725 PF04962 KduI/IolB family FY138_23735 PF00701 Dihydrodipicolinate synthetase family FY138_23740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_23740 PF13378 Enolase C-terminal domain-like FY138_23745 PF04909 Amidohydrolase FY138_23750 PF02311 AraC-like ligand binding domain FY138_23750 PF12833 Helix-turn-helix domain FY138_23755 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23760 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23765 PF00005 ABC transporter FY138_23765 PF08402 TOBE domain FY138_23775 PF00295 Glycosyl hydrolases family 28 FY138_23780 PF07470 Glycosyl Hydrolase Family 88 FY138_23785 PF00550 Phosphopantetheine attachment site FY138_23805 PF01165 Ribosomal protein S21 FY138_23815 PF00313 'Cold-shock' DNA-binding domain FY138_23820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_23820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_23835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_23835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_23840 PF00440 Bacterial regulatory proteins, tetR family FY138_23840 PF17938 Tetracyclin repressor-like, C-terminal domain FY138_23845 PF13416 Bacterial extracellular solute-binding protein FY138_23850 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23855 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23860 PF03459 TOBE domain FY138_23860 PF17912 MalK OB fold domain FY138_23860 PF00005 ABC transporter FY138_23865 PF01261 Xylose isomerase-like TIM barrel FY138_23870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY138_23870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY138_23870 PF01842 ACT domain FY138_23880 PF00356 Bacterial regulatory proteins, lacI family FY138_23895 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY138_23900 PF00005 ABC transporter FY138_23900 PF17912 MalK OB fold domain FY138_23910 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23915 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23920 PF00005 ABC transporter FY138_23925 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23930 PF09084 NMT1/THI5 like FY138_23935 PF00296 Luciferase-like monooxygenase FY138_23945 PF17912 MalK OB fold domain FY138_23945 PF00005 ABC transporter FY138_23950 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23955 PF00528 Binding-protein-dependent transport system inner membrane component FY138_23960 PF13416 Bacterial extracellular solute-binding protein FY138_23970 PF13426 PAS domain FY138_23970 PF08447 PAS fold FY138_23970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_23995 PF00005 ABC transporter FY138_23995 PF08402 TOBE domain FY138_24005 PF00528 Binding-protein-dependent transport system inner membrane component FY138_24010 PF00528 Binding-protein-dependent transport system inner membrane component FY138_24015 PF01177 Asp/Glu/Hydantoin racemase FY138_24055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_24055 PF03466 LysR substrate binding domain FY138_24060 PF00144 Beta-lactamase FY138_24070 PF00860 Permease family FY138_24080 PF07690 Major Facilitator Superfamily FY138_24085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_24085 PF00512 His Kinase A (phospho-acceptor) domain FY138_24085 PF00989 PAS fold FY138_24085 PF16736 Single Cache-like FY138_24090 PF00072 Response regulator receiver domain FY138_24090 PF00486 Transcriptional regulatory protein, C terminal FY138_24095 PF00529 HlyD membrane-fusion protein of T1SS FY138_24095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_24100 PF00873 AcrB/AcrD/AcrF family FY138_24105 PF13460 NAD(P)H-binding FY138_24115 PF01494 FAD binding domain FY138_24120 PF02308 MgtC family FY138_24130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY138_24135 PF00873 AcrB/AcrD/AcrF family FY138_24140 PF13520 Amino acid permease FY138_24145 PF13520 Amino acid permease FY138_24160 PF01594 AI-2E family transporter FY138_24185 PF01037 Lrp/AsnC ligand binding domain FY138_24210 PF13193 AMP-binding enzyme C-terminal domain FY138_24210 PF00501 AMP-binding enzyme FY138_24220 PF09339 IclR helix-turn-helix domain FY138_24220 PF01614 Bacterial transcriptional regulator FY138_24230 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY138_24230 PF03480 Bacterial extracellular solute-binding protein, family 7 FY138_24235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY138_24240 PF04199 Putative cyclase FY138_24245 PF01494 FAD binding domain FY138_24260 PF00196 Bacterial regulatory proteins, luxR family FY138_24260 PF00072 Response regulator receiver domain FY138_24265 PF00196 Bacterial regulatory proteins, luxR family FY138_24265 PF00072 Response regulator receiver domain FY138_24270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_24270 PF00512 His Kinase A (phospho-acceptor) domain FY138_24270 PF08448 PAS fold FY138_24270 PF13426 PAS domain FY138_24270 PF00072 Response regulator receiver domain FY138_24275 PF00384 Molybdopterin oxidoreductase FY138_24280 PF00210 Ferritin-like domain FY138_24285 PF00561 alpha/beta hydrolase fold FY138_24295 PF06441 Epoxide hydrolase N terminus FY138_24300 PF00171 Aldehyde dehydrogenase family FY138_24305 PF02566 OsmC-like protein FY138_24310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_24310 PF00672 HAMP domain FY138_24310 PF00512 His Kinase A (phospho-acceptor) domain FY138_24315 PF00072 Response regulator receiver domain FY138_24315 PF00486 Transcriptional regulatory protein, C terminal FY138_24320 PF00561 alpha/beta hydrolase fold FY138_24330 PF00578 AhpC/TSA family FY138_24330 PF02683 Cytochrome C biogenesis protein transmembrane region FY138_24330 PF17991 Thioredoxin like C-terminal domain FY138_24340 PF07690 Major Facilitator Superfamily FY138_24345 PF00990 Diguanylate cyclase, GGDEF domain FY138_24355 PF00005 ABC transporter FY138_24355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_24365 PF00106 short chain dehydrogenase FY138_24365 PF00300 Histidine phosphatase superfamily (branch 1) FY138_24370 PF01266 FAD dependent oxidoreductase FY138_24375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_24380 PF00528 Binding-protein-dependent transport system inner membrane component FY138_24385 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_24385 PF00528 Binding-protein-dependent transport system inner membrane component FY138_24390 PF01266 FAD dependent oxidoreductase FY138_24400 PF13649 Methyltransferase domain FY138_24405 PF00999 Sodium/hydrogen exchanger family FY138_24410 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY138_24415 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY138_24420 PF00459 Inositol monophosphatase family FY138_24435 PF01546 Peptidase family M20/M25/M40 FY138_24440 PF08220 DeoR-like helix-turn-helix domain FY138_24440 PF00455 DeoR C terminal sensor domain FY138_24445 PF00005 ABC transporter FY138_24445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_24450 PF00528 Binding-protein-dependent transport system inner membrane component FY138_24450 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_24455 PF00528 Binding-protein-dependent transport system inner membrane component FY138_24460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_24465 PF00465 Iron-containing alcohol dehydrogenase FY138_24470 PF00795 Carbon-nitrogen hydrolase FY138_24475 PF09383 NIL domain FY138_24475 PF00005 ABC transporter FY138_24480 PF00005 ABC transporter FY138_24480 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_24485 PF02653 Branched-chain amino acid transport system / permease component FY138_24490 PF02653 Branched-chain amino acid transport system / permease component FY138_24495 PF13458 Periplasmic binding protein FY138_24515 PF13614 AAA domain FY138_24515 PF00376 MerR family regulatory protein FY138_24520 PF02195 ParB-like nuclease domain FY138_24520 PF07506 RepB plasmid partitioning protein FY138_24525 PF03428 Replication protein C N-terminal domain FY138_24525 PF11800 Replication protein C C-terminal region FY138_24535 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_24535 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_24540 PF00005 ABC transporter FY138_24545 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_24550 PF00356 Bacterial regulatory proteins, lacI family FY138_24585 PF00487 Fatty acid desaturase FY138_24595 PF00313 'Cold-shock' DNA-binding domain FY138_24630 PF02810 SEC-C motif FY138_24630 PF01043 SecA preprotein cross-linking domain FY138_24630 PF07516 SecA Wing and Scaffold domain FY138_24630 PF07517 SecA DEAD-like domain FY138_24670 PF13091 PLD-like domain FY138_24670 PF13087 AAA domain FY138_24705 PF00512 His Kinase A (phospho-acceptor) domain FY138_24705 PF00989 PAS fold FY138_24705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_24710 PF00005 ABC transporter FY138_24710 PF00664 ABC transporter transmembrane region FY138_24720 PF01022 Bacterial regulatory protein, arsR family FY138_24750 PF01965 DJ-1/PfpI family FY138_24750 PF12833 Helix-turn-helix domain FY138_24755 PF07690 Major Facilitator Superfamily FY138_24760 PF07690 Major Facilitator Superfamily FY138_24765 PF01047 MarR family FY138_24780 PF07690 Major Facilitator Superfamily FY138_24810 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY138_24815 PF00561 alpha/beta hydrolase fold FY138_24825 PF04752 ChaC-like protein FY138_24830 PF03466 LysR substrate binding domain FY138_24830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_24845 PF00011 Hsp20/alpha crystallin family FY138_24890 PF04956 TrbC/VIRB2 family FY138_24895 PF05101 Type IV secretory pathway, VirB3-like protein FY138_24900 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY138_24905 PF07996 Type IV secretion system proteins FY138_24915 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY138_24925 PF04335 VirB8 protein FY138_24930 PF03524 Conjugal transfer protein FY138_24935 PF03743 Bacterial conjugation TrbI-like protein FY138_24940 PF00437 Type II/IV secretion system protein FY138_24960 PF03230 Antirestriction protein FY138_25040 PF05406 WGR domain FY138_25055 PF02534 Type IV secretory system Conjugative DNA transfer FY138_25070 PF17841 BID domain of Bartonella effector protein (Bep) FY138_25070 PF03389 MobA/MobL family FY138_25070 PF01443 Viral (Superfamily 1) RNA helicase FY138_25075 PF03466 LysR substrate binding domain FY138_25075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_25100 PF00196 Bacterial regulatory proteins, luxR family FY138_25100 PF03472 Autoinducer binding domain FY138_25105 PF00765 Autoinducer synthase FY138_25115 PF00486 Transcriptional regulatory protein, C terminal FY138_25115 PF00072 Response regulator receiver domain FY138_25140 PF00795 Carbon-nitrogen hydrolase FY138_25150 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY138_25155 PF08402 TOBE domain FY138_25155 PF00005 ABC transporter FY138_25160 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25165 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25180 PF13635 Domain of unknown function (DUF4143) FY138_25180 PF13173 AAA domain FY138_25185 PF02436 Conserved carboxylase domain FY138_25185 PF00364 Biotin-requiring enzyme FY138_25185 PF00289 Biotin carboxylase, N-terminal domain FY138_25185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY138_25185 PF00682 HMGL-like FY138_25185 PF02785 Biotin carboxylase C-terminal domain FY138_25190 PF14552 Tautomerase enzyme FY138_25195 PF03328 HpcH/HpaI aldolase/citrate lyase family FY138_25200 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY138_25210 PF01614 Bacterial transcriptional regulator FY138_25210 PF09339 IclR helix-turn-helix domain FY138_25220 PF00005 ABC transporter FY138_25225 PF00005 ABC transporter FY138_25235 PF02653 Branched-chain amino acid transport system / permease component FY138_25235 PF11862 Domain of unknown function (DUF3382) FY138_25255 PF00682 HMGL-like FY138_25255 PF08502 LeuA allosteric (dimerisation) domain FY138_25260 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25265 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25270 PF01047 MarR family FY138_25270 PF00480 ROK family FY138_25275 PF00128 Alpha amylase, catalytic domain FY138_25280 PF01546 Peptidase family M20/M25/M40 FY138_25280 PF07687 Peptidase dimerisation domain FY138_25285 PF01261 Xylose isomerase-like TIM barrel FY138_25290 PF17912 MalK OB fold domain FY138_25290 PF00005 ABC transporter FY138_25300 PF00480 ROK family FY138_25305 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25310 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25315 PF01547 Bacterial extracellular solute-binding protein FY138_25320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY138_25320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY138_25335 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY138_25350 PF00005 ABC transporter FY138_25355 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25360 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25365 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY138_25370 PF00005 ABC transporter FY138_25370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_25375 PF00005 ABC transporter FY138_25375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_25380 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_25380 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25385 PF00528 Binding-protein-dependent transport system inner membrane component FY138_25390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_25395 PF03737 Aldolase/RraA FY138_25400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_25400 PF03466 LysR substrate binding domain FY138_25405 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY138_25410 PF07687 Peptidase dimerisation domain FY138_25410 PF01546 Peptidase family M20/M25/M40 FY138_25415 PF01156 Inosine-uridine preferring nucleoside hydrolase FY138_25435 PF00857 Isochorismatase family FY138_25450 PF02678 Pirin FY138_25450 PF17954 Quercetinase C-terminal cupin domain FY138_25455 PF03358 NADPH-dependent FMN reductase FY138_25460 PF00561 alpha/beta hydrolase fold FY138_25480 PF13533 Biotin-lipoyl like FY138_25485 PF03466 LysR substrate binding domain FY138_25485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_25490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY138_25495 PF03466 LysR substrate binding domain FY138_25495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_25510 PF00857 Isochorismatase family FY138_25515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_25515 PF03466 LysR substrate binding domain FY138_25525 PF03551 Transcriptional regulator PadR-like family FY138_25585 PF02653 Branched-chain amino acid transport system / permease component FY138_25590 PF00005 ABC transporter FY138_25595 PF00005 ABC transporter FY138_25595 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_25605 PF14525 AraC-binding-like domain FY138_25605 PF12833 Helix-turn-helix domain FY138_25665 PF00392 Bacterial regulatory proteins, gntR family FY138_25665 PF07729 FCD domain FY138_25670 PF00775 Dioxygenase FY138_25670 PF04444 Catechol dioxygenase N terminus FY138_25675 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY138_25680 PF03328 HpcH/HpaI aldolase/citrate lyase family FY138_25690 PF01571 Aminomethyltransferase folate-binding domain FY138_25695 PF02219 Methylenetetrahydrofolate reductase FY138_25700 PF00551 Formyl transferase FY138_25710 PF00107 Zinc-binding dehydrogenase FY138_25710 PF08240 Alcohol dehydrogenase GroES-like domain FY138_25720 PF02770 Acyl-CoA dehydrogenase, middle domain FY138_25720 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY138_25720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY138_25720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY138_25725 PF00378 Enoyl-CoA hydratase/isomerase FY138_25730 PF13193 AMP-binding enzyme C-terminal domain FY138_25730 PF00501 AMP-binding enzyme FY138_25735 PF00171 Aldehyde dehydrogenase family FY138_25740 PF07690 Major Facilitator Superfamily FY138_25755 PF17158 Membrane-associated sensor, integral membrane domain FY138_25755 PF00990 Diguanylate cyclase, GGDEF domain FY138_25775 PF12802 MarR family FY138_25785 PF13458 Periplasmic binding protein FY138_25790 PF02653 Branched-chain amino acid transport system / permease component FY138_25800 PF00005 ABC transporter FY138_25800 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_25805 PF00005 ABC transporter FY138_25815 PF00171 Aldehyde dehydrogenase family FY138_25820 PF07687 Peptidase dimerisation domain FY138_25820 PF01546 Peptidase family M20/M25/M40 FY138_25825 PF00202 Aminotransferase class-III FY138_25830 PF00171 Aldehyde dehydrogenase family FY138_25835 PF08450 SMP-30/Gluconolactonase/LRE-like region FY138_25840 PF01261 Xylose isomerase-like TIM barrel FY138_25845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY138_25845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY138_25865 PF01979 Amidohydrolase family FY138_25870 PF00480 ROK family FY138_25870 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY138_25875 PF02653 Branched-chain amino acid transport system / permease component FY138_25880 PF13407 Periplasmic binding protein domain FY138_25885 PF00005 ABC transporter FY138_25905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_25905 PF03466 LysR substrate binding domain FY138_25910 PF07690 Major Facilitator Superfamily FY138_25920 PF00135 Carboxylesterase family FY138_25930 PF00135 Carboxylesterase family FY138_25940 PF00005 ABC transporter FY138_25945 PF02653 Branched-chain amino acid transport system / permease component FY138_25950 PF00135 Carboxylesterase family FY138_25960 PF04303 PrpF protein FY138_25965 PF03737 Aldolase/RraA FY138_25970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY138_25975 PF02585 GlcNAc-PI de-N-acetylase FY138_25990 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY138_25990 PF00005 ABC transporter FY138_25995 PF00005 ABC transporter FY138_26000 PF13458 Periplasmic binding protein FY138_26010 PF03466 LysR substrate binding domain FY138_26010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_26015 PF01614 Bacterial transcriptional regulator FY138_26015 PF09339 IclR helix-turn-helix domain FY138_26025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY138_26025 PF13378 Enolase C-terminal domain-like FY138_26035 PF08402 TOBE domain FY138_26035 PF00005 ABC transporter FY138_26040 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26045 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26055 PF07690 Major Facilitator Superfamily FY138_26090 PF03928 Haem-degrading FY138_26110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_26115 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26120 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_26120 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26125 PF00005 ABC transporter FY138_26125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_26135 PF00296 Luciferase-like monooxygenase FY138_26145 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26150 PF00005 ABC transporter FY138_26155 PF00732 GMC oxidoreductase FY138_26155 PF05199 GMC oxidoreductase FY138_26160 PF00171 Aldehyde dehydrogenase family FY138_26175 PF00392 Bacterial regulatory proteins, gntR family FY138_26175 PF07729 FCD domain FY138_26180 PF04324 BFD-like [2Fe-2S] binding domain FY138_26180 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_26190 PF01266 FAD dependent oxidoreductase FY138_26200 PF01958 Domain of unknown function DUF108 FY138_26200 PF03447 Homoserine dehydrogenase, NAD binding domain FY138_26205 PF01042 Endoribonuclease L-PSP FY138_26210 PF01548 Transposase FY138_26210 PF02371 Transposase IS116/IS110/IS902 family FY138_26250 PF00857 Isochorismatase family FY138_26260 PF00440 Bacterial regulatory proteins, tetR family FY138_26265 PF00005 ABC transporter FY138_26270 PF01032 FecCD transport family FY138_26275 PF01032 FecCD transport family FY138_26285 PF07732 Multicopper oxidase FY138_26285 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY138_26285 PF00394 Multicopper oxidase FY138_26285 PF07731 Multicopper oxidase FY138_26290 PF02885 Glycosyl transferase family, helical bundle domain FY138_26290 PF00591 Glycosyl transferase family, a/b domain FY138_26295 PF07715 TonB-dependent Receptor Plug Domain FY138_26295 PF00593 TonB dependent receptor FY138_26330 PF03551 Transcriptional regulator PadR-like family FY138_26365 PF07731 Multicopper oxidase FY138_26365 PF07732 Multicopper oxidase FY138_26365 PF00394 Multicopper oxidase FY138_26385 PF01209 ubiE/COQ5 methyltransferase family FY138_26400 PF04079 Segregation and condensation complex subunit ScpB FY138_26410 PF00589 Phage integrase family FY138_26420 PF13614 AAA domain FY138_26425 PF07506 RepB plasmid partitioning protein FY138_26425 PF02195 ParB-like nuclease domain FY138_26430 PF11800 Replication protein C C-terminal region FY138_26430 PF03428 Replication protein C N-terminal domain FY138_26435 PF00239 Resolvase, N terminal domain FY138_26440 PF11972 HTH DNA binding domain FY138_26440 PF07756 Protein of unknown function (DUF1612) FY138_26460 PF02796 Helix-turn-helix domain of resolvase FY138_26460 PF00239 Resolvase, N terminal domain FY138_26465 PF07690 Major Facilitator Superfamily FY138_26475 PF08808 RES domain FY138_26510 PF02899 Phage integrase, N-terminal SAM-like domain FY138_26510 PF00589 Phage integrase family FY138_26515 PF00293 NUDIX domain FY138_26530 PF13332 Hemagglutinin repeat FY138_26530 PF02661 Fic/DOC family FY138_26530 PF05860 haemagglutination activity domain FY138_26530 PF03543 Yersinia/Haemophilus virulence surface antigen FY138_26530 PF13018 Extended Signal Peptide of Type V secretion system FY138_26555 PF17762 HTH domain found in ParB protein FY138_26555 PF02195 ParB-like nuclease domain FY138_26580 PF03831 PhnA domain FY138_26580 PF08274 PhnA Zinc-Ribbon FY138_26600 PF01810 LysE type translocator FY138_26650 PF00293 NUDIX domain FY138_26665 PF05284 Protein of unknown function (DUF736) FY138_26670 PF00216 Bacterial DNA-binding protein FY138_26690 PF02534 Type IV secretory system Conjugative DNA transfer FY138_26695 PF06412 Conjugal transfer protein TraD FY138_26700 PF07820 TraC-like protein FY138_26705 PF03389 MobA/MobL family FY138_26705 PF17841 BID domain of Bartonella effector protein (Bep) FY138_26705 PF01443 Viral (Superfamily 1) RNA helicase FY138_26710 PF10502 Signal peptidase, peptidase S26 FY138_26715 PF00795 Carbon-nitrogen hydrolase FY138_26720 PF06871 TraH_2 FY138_26725 PF09228 Prokaryotic Transcriptional repressor TraM FY138_26730 PF13426 PAS domain FY138_26730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY138_26730 PF08447 PAS fold FY138_26740 PF00196 Bacterial regulatory proteins, luxR family FY138_26740 PF03472 Autoinducer binding domain FY138_26745 PF00128 Alpha amylase, catalytic domain FY138_26750 PF02690 Na+/Pi-cotransporter FY138_26760 PF00455 DeoR C terminal sensor domain FY138_26760 PF08220 DeoR-like helix-turn-helix domain FY138_26765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_26770 PF00005 ABC transporter FY138_26770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_26775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_26775 PF00005 ABC transporter FY138_26780 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26785 PF00528 Binding-protein-dependent transport system inner membrane component FY138_26785 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_26790 PF03009 Glycerophosphoryl diester phosphodiesterase family FY138_26795 PF00459 Inositol monophosphatase family FY138_26820 PF00067 Cytochrome P450 FY138_26825 PF00067 Cytochrome P450 FY138_26840 PF06903 VirK protein FY138_26875 PF00512 His Kinase A (phospho-acceptor) domain FY138_26875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY138_26880 PF01464 Transglycosylase SLT domain FY138_26885 PF04956 TrbC/VIRB2 family FY138_26890 PF05101 Type IV secretory pathway, VirB3-like protein FY138_26895 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY138_26905 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY138_26910 PF17413 Outer membrane lipoprotein virB7 FY138_26915 PF04335 VirB8 protein FY138_26920 PF03524 Conjugal transfer protein FY138_26925 PF03743 Bacterial conjugation TrbI-like protein FY138_26930 PF00437 Type II/IV secretion system protein FY138_26935 PF00486 Transcriptional regulatory protein, C terminal FY138_26935 PF00072 Response regulator receiver domain FY138_26940 PF07181 VirC2 protein FY138_26945 PF07015 VirC1 protein FY138_26950 PF07328 T-DNA border endonuclease VirD1 FY138_26955 PF03432 Relaxase/Mobilisation nuclease domain FY138_26965 PF02534 Type IV secretory system Conjugative DNA transfer FY138_26985 PF12189 Single-strand DNA-binding protein FY138_26990 PF07229 VirE2 FY138_27010 PF05717 IS66 Orf2 like protein FY138_27015 PF03472 Autoinducer binding domain FY138_27015 PF00196 Bacterial regulatory proteins, luxR family FY138_27030 PF00459 Inositol monophosphatase family FY138_27065 PF02027 RolB/RolC glucosidase family FY138_27070 PF01425 Amidase FY138_27075 PF02027 RolB/RolC glucosidase family FY138_27075 PF01593 Flavin containing amine oxidoreductase FY138_27085 PF02027 RolB/RolC glucosidase family FY138_27090 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain FY138_27100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY138_27100 PF00005 ABC transporter FY138_27105 PF00528 Binding-protein-dependent transport system inner membrane component FY138_27105 PF12911 N-terminal TM domain of oligopeptide transport permease C FY138_27110 PF00528 Binding-protein-dependent transport system inner membrane component FY138_27115 PF01266 FAD dependent oxidoreductase FY138_27120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY138_27120 PF17806 Sarcosine oxidase A3 domain FY138_27130 PF01266 FAD dependent oxidoreductase FY138_27135 PF03466 LysR substrate binding domain FY138_27135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_27140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY138_27145 PF05378 Hydantoinase/oxoprolinase N-terminal region FY138_27145 PF01968 Hydantoinase/oxoprolinase FY138_27155 PF00710 Asparaginase, N-terminal FY138_27155 PF17763 Glutaminase/Asparaginase C-terminal domain FY138_27160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY138_27160 PF03466 LysR substrate binding domain FY138_27170 PF00528 Binding-protein-dependent transport system inner membrane component FY138_27180 PF08402 TOBE domain FY138_27180 PF00005 ABC transporter FY138_27190 PF03743 Bacterial conjugation TrbI-like protein FY138_27200 PF03524 Conjugal transfer protein FY138_27205 PF04335 VirB8 protein FY138_27210 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY138_27215 PF10907 Protein of unknown function (DUF2749) FY138_27225 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY138_27230 PF05101 Type IV secretory pathway, VirB3-like protein FY138_27235 PF04956 TrbC/VIRB2 family FY138_27240 PF00437 Type II/IV secretion system protein FY138_27245 PF00765 Autoinducer synthase