locus-tag class description FY140_00010 PF01695 IstB-like ATP binding protein FY140_00015 PF00665 Integrase core domain FY140_00030 PF01037 Lrp/AsnC ligand binding domain FY140_00035 PF00171 Aldehyde dehydrogenase family FY140_00040 PF00202 Aminotransferase class-III FY140_00045 PF00392 Bacterial regulatory proteins, gntR family FY140_00045 PF00155 Aminotransferase class I and II FY140_00050 PF00291 Pyridoxal-phosphate dependent enzyme FY140_00055 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY140_00060 PF01321 Creatinase/Prolidase N-terminal domain FY140_00060 PF00557 Metallopeptidase family M24 FY140_00065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FY140_00070 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_00075 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00080 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00085 PF00005 ABC transporter FY140_00095 PF01261 Xylose isomerase-like TIM barrel FY140_00105 PF01261 Xylose isomerase-like TIM barrel FY140_00110 PF02653 Branched-chain amino acid transport system / permease component FY140_00115 PF02653 Branched-chain amino acid transport system / permease component FY140_00120 PF00005 ABC transporter FY140_00130 PF00356 Bacterial regulatory proteins, lacI family FY140_00145 PF00654 Voltage gated chloride channel FY140_00150 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_00155 PF06434 Aconitate hydratase 2 N-terminus FY140_00155 PF11791 Aconitate B N-terminal domain FY140_00155 PF00330 Aconitase family (aconitate hydratase) FY140_00170 PF13953 PapC C-terminal domain FY140_00170 PF13954 PapC N-terminal domain FY140_00170 PF00577 Outer membrane usher protein FY140_00180 PF00005 ABC transporter FY140_00185 PF00005 ABC transporter FY140_00185 PF00664 ABC transporter transmembrane region FY140_00190 PF03401 Tripartite tricarboxylate transporter family receptor FY140_00195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY140_00195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY140_00205 PF05532 CsbD-like FY140_00225 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00230 PF08402 TOBE domain FY140_00230 PF00005 ABC transporter FY140_00240 PF00459 Inositol monophosphatase family FY140_00245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_00245 PF00005 ABC transporter FY140_00255 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_00255 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00260 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_00270 PF00392 Bacterial regulatory proteins, gntR family FY140_00270 PF07729 FCD domain FY140_00280 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_00280 PF13378 Enolase C-terminal domain-like FY140_00285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_00285 PF00005 ABC transporter FY140_00290 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_00290 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00295 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_00310 PF08450 SMP-30/Gluconolactonase/LRE-like region FY140_00315 PF00701 Dihydrodipicolinate synthetase family FY140_00320 PF07690 Major Facilitator Superfamily FY140_00330 PF12838 4Fe-4S dicluster domain FY140_00330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY140_00330 PF00384 Molybdopterin oxidoreductase FY140_00330 PF01568 Molydopterin dinucleotide binding domain FY140_00330 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY140_00335 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY140_00335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY140_00335 PF00037 4Fe-4S binding domain FY140_00345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_00345 PF03466 LysR substrate binding domain FY140_00350 PF01613 Flavin reductase like domain FY140_00355 PF02530 Porin subfamily FY140_00360 PF00990 Diguanylate cyclase, GGDEF domain FY140_00360 PF00563 EAL domain FY140_00360 PF03707 Bacterial signalling protein N terminal repeat FY140_00365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_00365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_00370 PF00005 ABC transporter FY140_00375 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00380 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00385 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_00395 PF00356 Bacterial regulatory proteins, lacI family FY140_00410 PF05544 Proline racemase FY140_00420 PF01266 FAD dependent oxidoreductase FY140_00425 PF00005 ABC transporter FY140_00430 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00435 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00445 PF02615 Malate/L-lactate dehydrogenase FY140_00450 PF00701 Dihydrodipicolinate synthetase family FY140_00455 PF07729 FCD domain FY140_00455 PF00392 Bacterial regulatory proteins, gntR family FY140_00460 PF12327 FtsZ family, C-terminal domain FY140_00460 PF00091 Tubulin/FtsZ family, GTPase domain FY140_00465 PF00072 Response regulator receiver domain FY140_00485 PF00005 ABC transporter FY140_00490 PF13533 Biotin-lipoyl like FY140_00495 PF02056 Family 4 glycosyl hydrolase FY140_00495 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY140_00500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_00500 PF00005 ABC transporter FY140_00505 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00505 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_00510 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_00520 PF02056 Family 4 glycosyl hydrolase FY140_00520 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY140_00545 PF00480 ROK family FY140_00550 PF13416 Bacterial extracellular solute-binding protein FY140_00555 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00560 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00565 PF00206 Lyase FY140_00565 PF14698 Argininosuccinate lyase C-terminal FY140_00570 PF08402 TOBE domain FY140_00570 PF00005 ABC transporter FY140_00575 PF00294 pfkB family carbohydrate kinase FY140_00580 PF12411 Choline sulfatase enzyme C terminal FY140_00580 PF00884 Sulfatase FY140_00585 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY140_00590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_00590 PF03466 LysR substrate binding domain FY140_00595 PF00171 Aldehyde dehydrogenase family FY140_00600 PF00005 ABC transporter FY140_00605 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY140_00605 PF00005 ABC transporter FY140_00615 PF02653 Branched-chain amino acid transport system / permease component FY140_00625 PF10114 Sensory domain found in PocR FY140_00625 PF12833 Helix-turn-helix domain FY140_00630 PF01381 Helix-turn-helix FY140_00640 PF00005 ABC transporter FY140_00645 PF01032 FecCD transport family FY140_00650 PF01032 FecCD transport family FY140_00660 PF07715 TonB-dependent Receptor Plug Domain FY140_00660 PF00593 TonB dependent receptor FY140_00665 PF12833 Helix-turn-helix domain FY140_00670 PF00141 Peroxidase FY140_00675 PF03466 LysR substrate binding domain FY140_00675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_00685 PF00512 His Kinase A (phospho-acceptor) domain FY140_00690 PF00486 Transcriptional regulatory protein, C terminal FY140_00690 PF00072 Response regulator receiver domain FY140_00695 PF00529 HlyD membrane-fusion protein of T1SS FY140_00695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_00700 PF00873 AcrB/AcrD/AcrF family FY140_00710 PF01865 Protein of unknown function DUF47 FY140_00715 PF01384 Phosphate transporter family FY140_00720 PF02735 Ku70/Ku80 beta-barrel domain FY140_00725 PF13298 DNA polymerase Ligase (LigD) FY140_00725 PF04679 ATP dependent DNA ligase C terminal region FY140_00725 PF01068 ATP dependent DNA ligase domain FY140_00730 PF02735 Ku70/Ku80 beta-barrel domain FY140_00745 PF00563 EAL domain FY140_00745 PF03707 Bacterial signalling protein N terminal repeat FY140_00745 PF13188 PAS domain FY140_00745 PF00990 Diguanylate cyclase, GGDEF domain FY140_00755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_00760 PF03786 D-mannonate dehydratase (UxuA) FY140_00765 PF00392 Bacterial regulatory proteins, gntR family FY140_00765 PF07729 FCD domain FY140_00770 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00775 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_00775 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00780 PF00005 ABC transporter FY140_00780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_00785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_00785 PF00005 ABC transporter FY140_00790 PF00580 UvrD/REP helicase N-terminal domain FY140_00790 PF13361 UvrD-like helicase C-terminal domain FY140_00815 PF00534 Glycosyl transferases group 1 FY140_00820 PF00005 ABC transporter FY140_00820 PF00664 ABC transporter transmembrane region FY140_00825 PF01050 Mannose-6-phosphate isomerase FY140_00825 PF00483 Nucleotidyl transferase FY140_00830 PF13439 Glycosyltransferase Family 4 FY140_00830 PF00534 Glycosyl transferases group 1 FY140_00850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_00850 PF03466 LysR substrate binding domain FY140_00855 PF00248 Aldo/keto reductase family FY140_00860 PF01758 Sodium Bile acid symporter family FY140_00865 PF02534 Type IV secretory system Conjugative DNA transfer FY140_00880 PF03389 MobA/MobL family FY140_00880 PF01443 Viral (Superfamily 1) RNA helicase FY140_00880 PF17841 BID domain of Bartonella effector protein (Bep) FY140_00885 PF07262 CDI immunity protein FY140_00920 PF08479 POTRA domain, ShlB-type FY140_00920 PF17287 POTRA domain FY140_00920 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FY140_00930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY140_00930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY140_00935 PF11953 Domain of unknown function (DUF3470) FY140_00935 PF00037 4Fe-4S binding domain FY140_00945 PF12833 Helix-turn-helix domain FY140_00945 PF12852 Cupin FY140_00950 PF00106 short chain dehydrogenase FY140_00955 PF00459 Inositol monophosphatase family FY140_00960 PF03009 Glycerophosphoryl diester phosphodiesterase family FY140_00965 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00970 PF00528 Binding-protein-dependent transport system inner membrane component FY140_00975 PF00005 ABC transporter FY140_00975 PF17912 MalK OB fold domain FY140_00985 PF00480 ROK family FY140_00995 PF16220 Domain of unknown function (DUF4880) FY140_00995 PF04773 FecR protein FY140_01000 PF07715 TonB-dependent Receptor Plug Domain FY140_01000 PF00593 TonB dependent receptor FY140_01005 PF07690 Major Facilitator Superfamily FY140_01025 PF07470 Glycosyl Hydrolase Family 88 FY140_01035 PF00005 ABC transporter FY140_01035 PF17912 MalK OB fold domain FY140_01040 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01045 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01050 PF00356 Bacterial regulatory proteins, lacI family FY140_01060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_01060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_01065 PF01261 Xylose isomerase-like TIM barrel FY140_01070 PF13407 Periplasmic binding protein domain FY140_01075 PF13407 Periplasmic binding protein domain FY140_01080 PF00356 Bacterial regulatory proteins, lacI family FY140_01085 PF00108 Thiolase, N-terminal domain FY140_01085 PF02803 Thiolase, C-terminal domain FY140_01090 PF01144 Coenzyme A transferase FY140_01095 PF01144 Coenzyme A transferase FY140_01100 PF09339 IclR helix-turn-helix domain FY140_01100 PF01614 Bacterial transcriptional regulator FY140_01110 PF01494 FAD binding domain FY140_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_01115 PF03466 LysR substrate binding domain FY140_01125 PF02627 Carboxymuconolactone decarboxylase family FY140_01130 PF00775 Dioxygenase FY140_01130 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY140_01135 PF00775 Dioxygenase FY140_01140 PF10397 Adenylosuccinate lyase C-terminus FY140_01140 PF00206 Lyase FY140_01145 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01150 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01155 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_01160 PF00005 ABC transporter FY140_01165 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY140_01165 PF08501 Shikimate dehydrogenase substrate binding domain FY140_01170 PF01220 Dehydroquinase class II FY140_01180 PF01261 Xylose isomerase-like TIM barrel FY140_01180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_01185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_01185 PF00005 ABC transporter FY140_01190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_01195 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01200 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01200 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_01215 PF13458 Periplasmic binding protein FY140_01230 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY140_01230 PF00005 ABC transporter FY140_01235 PF00005 ABC transporter FY140_01250 PF00294 pfkB family carbohydrate kinase FY140_01255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY140_01255 PF00205 Thiamine pyrophosphate enzyme, central domain FY140_01255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY140_01260 PF01261 Xylose isomerase-like TIM barrel FY140_01265 PF04962 KduI/IolB family FY140_01270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_01270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_01275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_01275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_01280 PF00356 Bacterial regulatory proteins, lacI family FY140_01285 PF01047 MarR family FY140_01290 PF02633 Creatinine amidohydrolase FY140_01295 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY140_01295 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY140_01310 PF13505 Outer membrane protein beta-barrel domain FY140_01330 PF03824 High-affinity nickel-transport protein FY140_01350 PF01081 KDPG and KHG aldolase FY140_01355 PF01928 CYTH domain FY140_01365 PF00581 Rhodanese-like domain FY140_01365 PF17773 UPF0176 acylphosphatase like domain FY140_01370 PF03707 Bacterial signalling protein N terminal repeat FY140_01370 PF00990 Diguanylate cyclase, GGDEF domain FY140_01370 PF00563 EAL domain FY140_01370 PF13188 PAS domain FY140_01375 PF03180 NLPA lipoprotein FY140_01380 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01385 PF00005 ABC transporter FY140_01385 PF09383 NIL domain FY140_01390 PF00881 Nitroreductase family FY140_01395 PF01425 Amidase FY140_01400 PF00563 EAL domain FY140_01400 PF00990 Diguanylate cyclase, GGDEF domain FY140_01400 PF08447 PAS fold FY140_01400 PF08448 PAS fold FY140_01415 PF03776 Septum formation topological specificity factor MinE FY140_01420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY140_01425 PF05209 Septum formation inhibitor MinC, N-terminal domain FY140_01425 PF03775 Septum formation inhibitor MinC, C-terminal domain FY140_01430 PF13419 Haloacid dehalogenase-like hydrolase FY140_01435 PF00392 Bacterial regulatory proteins, gntR family FY140_01435 PF07729 FCD domain FY140_01440 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_01450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_01455 PF00107 Zinc-binding dehydrogenase FY140_01455 PF08240 Alcohol dehydrogenase GroES-like domain FY140_01460 PF03786 D-mannonate dehydratase (UxuA) FY140_01470 PF00171 Aldehyde dehydrogenase family FY140_01480 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_01485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_01485 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY140_01490 PF00296 Luciferase-like monooxygenase FY140_01505 PF02798 Glutathione S-transferase, N-terminal domain FY140_01505 PF00043 Glutathione S-transferase, C-terminal domain FY140_01510 PF00005 ABC transporter FY140_01510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_01515 PF03841 L-seryl-tRNA selenium transferase FY140_01530 PF01979 Amidohydrolase family FY140_01535 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_01535 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01540 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_01550 PF00534 Glycosyl transferases group 1 FY140_01550 PF13439 Glycosyltransferase Family 4 FY140_01555 PF02563 Polysaccharide biosynthesis/export protein FY140_01560 PF13533 Biotin-lipoyl like FY140_01565 PF00873 AcrB/AcrD/AcrF family FY140_01580 PF01613 Flavin reductase like domain FY140_01585 PF00248 Aldo/keto reductase family FY140_01590 PF00296 Luciferase-like monooxygenase FY140_01600 PF08402 TOBE domain FY140_01600 PF00005 ABC transporter FY140_01605 PF01547 Bacterial extracellular solute-binding protein FY140_01610 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01615 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01620 PF01055 Glycosyl hydrolases family 31 FY140_01630 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01635 PF09084 NMT1/THI5 like FY140_01640 PF02110 Hydroxyethylthiazole kinase family FY140_01645 PF02581 Thiamine monophosphate synthase FY140_01650 PF08543 Phosphomethylpyrimidine kinase FY140_01655 PF01037 Lrp/AsnC ligand binding domain FY140_01660 PF01168 Alanine racemase, N-terminal domain FY140_01660 PF00842 Alanine racemase, C-terminal domain FY140_01665 PF01266 FAD dependent oxidoreductase FY140_01680 PF02954 Bacterial regulatory protein, Fis family FY140_01680 PF00158 Sigma-54 interaction domain FY140_01680 PF00072 Response regulator receiver domain FY140_01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_01685 PF02743 Cache domain FY140_01685 PF00512 His Kinase A (phospho-acceptor) domain FY140_01690 PF00375 Sodium:dicarboxylate symporter family FY140_01695 PF00892 EamA-like transporter family FY140_01700 PF00202 Aminotransferase class-III FY140_01715 PF07687 Peptidase dimerisation domain FY140_01715 PF01546 Peptidase family M20/M25/M40 FY140_01725 PF01270 Glycosyl hydrolases family 8 FY140_01735 PF03552 Cellulose synthase FY140_01735 PF07238 PilZ domain FY140_01735 PF00535 Glycosyl transferase family 2 FY140_01765 PF16363 GDP-mannose 4,6 dehydratase FY140_01770 PF01370 NAD dependent epimerase/dehydratase family FY140_01780 PF00196 Bacterial regulatory proteins, luxR family FY140_01780 PF00072 Response regulator receiver domain FY140_01795 PF00005 ABC transporter FY140_01795 PF00664 ABC transporter transmembrane region FY140_01800 PF00529 HlyD membrane-fusion protein of T1SS FY140_01815 PF02563 Polysaccharide biosynthesis/export protein FY140_01820 PF02397 Bacterial sugar transferase FY140_01830 PF00202 Aminotransferase class-III FY140_01835 PF03734 L,D-transpeptidase catalytic domain FY140_01835 PF17969 L,D-transpeptidase C-terminal domain FY140_01855 PF02245 Methylpurine-DNA glycosylase (MPG) FY140_01870 PF00356 Bacterial regulatory proteins, lacI family FY140_01875 PF01547 Bacterial extracellular solute-binding protein FY140_01880 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01885 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01890 PF03459 TOBE domain FY140_01890 PF17912 MalK OB fold domain FY140_01890 PF00005 ABC transporter FY140_01900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_01900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_01905 PF04055 Radical SAM superfamily FY140_01910 PF01242 6-pyruvoyl tetrahydropterin synthase FY140_01915 PF06508 Queuosine biosynthesis protein QueC FY140_01920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_01920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_01930 PF00005 ABC transporter FY140_01930 PF17912 MalK OB fold domain FY140_01935 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01940 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01945 PF01547 Bacterial extracellular solute-binding protein FY140_01955 PF00483 Nucleotidyl transferase FY140_01955 PF01050 Mannose-6-phosphate isomerase FY140_01960 PF03949 Malic enzyme, NAD binding domain FY140_01960 PF01515 Phosphate acetyl/butaryl transferase FY140_01960 PF00390 Malic enzyme, N-terminal domain FY140_01970 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_01975 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01980 PF00528 Binding-protein-dependent transport system inner membrane component FY140_01985 PF00005 ABC transporter FY140_01990 PF03972 MmgE/PrpD family FY140_01995 PF00296 Luciferase-like monooxygenase FY140_02000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_02000 PF08447 PAS fold FY140_02000 PF13426 PAS domain FY140_02005 PF01266 FAD dependent oxidoreductase FY140_02020 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY140_02025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_02030 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_02035 PF07722 Peptidase C26 FY140_02040 PF02653 Branched-chain amino acid transport system / permease component FY140_02045 PF00005 ABC transporter FY140_02050 PF13407 Periplasmic binding protein domain FY140_02055 PF01546 Peptidase family M20/M25/M40 FY140_02060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02070 PF00005 ABC transporter FY140_02070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02075 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02075 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_02080 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02085 PF03466 LysR substrate binding domain FY140_02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_02090 PF01112 Asparaginase FY140_02105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02120 PF00005 ABC transporter FY140_02125 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02125 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_02130 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02135 PF00196 Bacterial regulatory proteins, luxR family FY140_02135 PF00072 Response regulator receiver domain FY140_02140 PF03737 Aldolase/RraA FY140_02145 PF01370 NAD dependent epimerase/dehydratase family FY140_02150 PF00920 Dehydratase family FY140_02155 PF08402 TOBE domain FY140_02155 PF00005 ABC transporter FY140_02160 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02165 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_02175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_02180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_02180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_02185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_02185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_02190 PF07729 FCD domain FY140_02190 PF00392 Bacterial regulatory proteins, gntR family FY140_02200 PF00529 HlyD membrane-fusion protein of T1SS FY140_02200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_02205 PF00664 ABC transporter transmembrane region FY140_02205 PF00005 ABC transporter FY140_02225 PF08281 Sigma-70, region 4 FY140_02225 PF04542 Sigma-70 region 2 FY140_02225 PF12680 SnoaL-like domain FY140_02230 PF00005 ABC transporter FY140_02235 PF01032 FecCD transport family FY140_02250 PF01209 ubiE/COQ5 methyltransferase family FY140_02255 PF00127 Copper binding proteins, plastocyanin/azurin family FY140_02260 PF00005 ABC transporter FY140_02265 PF01032 FecCD transport family FY140_02280 PF01546 Peptidase family M20/M25/M40 FY140_02280 PF07687 Peptidase dimerisation domain FY140_02285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_02300 PF01968 Hydantoinase/oxoprolinase FY140_02300 PF05378 Hydantoinase/oxoprolinase N-terminal region FY140_02310 PF00171 Aldehyde dehydrogenase family FY140_02315 PF00180 Isocitrate/isopropylmalate dehydrogenase FY140_02320 PF00171 Aldehyde dehydrogenase family FY140_02325 PF01266 FAD dependent oxidoreductase FY140_02345 PF00202 Aminotransferase class-III FY140_02355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02360 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02365 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02365 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_02370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02370 PF00005 ABC transporter FY140_02375 PF01037 Lrp/AsnC ligand binding domain FY140_02380 PF01266 FAD dependent oxidoreductase FY140_02385 PF01266 FAD dependent oxidoreductase FY140_02390 PF04324 BFD-like [2Fe-2S] binding domain FY140_02390 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_02400 PF03466 LysR substrate binding domain FY140_02400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_02410 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_02415 PF00005 ABC transporter FY140_02425 PF07687 Peptidase dimerisation domain FY140_02425 PF01546 Peptidase family M20/M25/M40 FY140_02430 PF00296 Luciferase-like monooxygenase FY140_02435 PF00296 Luciferase-like monooxygenase FY140_02440 PF02082 Transcriptional regulator FY140_02450 PF01613 Flavin reductase like domain FY140_02455 PF00296 Luciferase-like monooxygenase FY140_02470 PF00296 Luciferase-like monooxygenase FY140_02485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02490 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02495 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02500 PF00005 ABC transporter FY140_02505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02505 PF00005 ABC transporter FY140_02510 PF00248 Aldo/keto reductase family FY140_02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_02515 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY140_02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_02520 PF03466 LysR substrate binding domain FY140_02525 PF00296 Luciferase-like monooxygenase FY140_02530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02545 PF01546 Peptidase family M20/M25/M40 FY140_02545 PF07687 Peptidase dimerisation domain FY140_02550 PF00296 Luciferase-like monooxygenase FY140_02555 PF13460 NAD(P)H-binding FY140_02565 PF00296 Luciferase-like monooxygenase FY140_02570 PF00296 Luciferase-like monooxygenase FY140_02575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_02575 PF13378 Enolase C-terminal domain-like FY140_02585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_02590 PF00005 ABC transporter FY140_02590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02595 PF00005 ABC transporter FY140_02595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_02600 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02600 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_02605 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02615 PF00392 Bacterial regulatory proteins, gntR family FY140_02615 PF07729 FCD domain FY140_02625 PF00561 alpha/beta hydrolase fold FY140_02630 PF00106 short chain dehydrogenase FY140_02650 PF04143 Sulphur transport FY140_02660 PF01676 Metalloenzyme superfamily FY140_02660 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY140_02665 PF00364 Biotin-requiring enzyme FY140_02665 PF02817 e3 binding domain FY140_02665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY140_02670 PF02779 Transketolase, pyrimidine binding domain FY140_02670 PF02780 Transketolase, C-terminal domain FY140_02675 PF00676 Dehydrogenase E1 component FY140_02675 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY140_02680 PF02770 Acyl-CoA dehydrogenase, middle domain FY140_02680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_02680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY140_02685 PF02803 Thiolase, C-terminal domain FY140_02685 PF00108 Thiolase, N-terminal domain FY140_02690 PF01037 Lrp/AsnC ligand binding domain FY140_02695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY140_02695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_02695 PF02770 Acyl-CoA dehydrogenase, middle domain FY140_02700 PF01039 Carboxyl transferase domain FY140_02705 PF00289 Biotin carboxylase, N-terminal domain FY140_02705 PF02785 Biotin carboxylase C-terminal domain FY140_02705 PF00364 Biotin-requiring enzyme FY140_02705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_02710 PF00682 HMGL-like FY140_02715 PF00378 Enoyl-CoA hydratase/isomerase FY140_02720 PF02569 Pantoate-beta-alanine ligase FY140_02725 PF02548 Ketopantoate hydroxymethyltransferase FY140_02730 PF01261 Xylose isomerase-like TIM barrel FY140_02735 PF00596 Class II Aldolase and Adducin N-terminal domain FY140_02740 PF08220 DeoR-like helix-turn-helix domain FY140_02740 PF00455 DeoR C terminal sensor domain FY140_02745 PF13407 Periplasmic binding protein domain FY140_02750 PF00005 ABC transporter FY140_02755 PF02653 Branched-chain amino acid transport system / permease component FY140_02760 PF02653 Branched-chain amino acid transport system / permease component FY140_02765 PF05336 L-rhamnose mutarotase FY140_02775 PF00561 alpha/beta hydrolase fold FY140_02785 PF08447 PAS fold FY140_02785 PF08448 PAS fold FY140_02785 PF00563 EAL domain FY140_02785 PF00990 Diguanylate cyclase, GGDEF domain FY140_02795 PF00171 Aldehyde dehydrogenase family FY140_02800 PF08713 DNA alkylation repair enzyme FY140_02805 PF00005 ABC transporter FY140_02810 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02815 PF00528 Binding-protein-dependent transport system inner membrane component FY140_02825 PF00378 Enoyl-CoA hydratase/isomerase FY140_02840 PF08241 Methyltransferase domain FY140_02850 PF00795 Carbon-nitrogen hydrolase FY140_02855 PF00462 Glutaredoxin FY140_02865 PF08241 Methyltransferase domain FY140_02880 PF00293 NUDIX domain FY140_02885 PF13508 Acetyltransferase (GNAT) domain FY140_02885 PF00583 Acetyltransferase (GNAT) family FY140_02890 PF01960 ArgJ family FY140_02900 PF07516 SecA Wing and Scaffold domain FY140_02900 PF01043 SecA preprotein cross-linking domain FY140_02900 PF07517 SecA DEAD-like domain FY140_02900 PF02810 SEC-C motif FY140_02905 PF00892 EamA-like transporter family FY140_02910 PF01757 Acyltransferase family FY140_02990 PF01943 Polysaccharide biosynthesis protein FY140_02995 PF00534 Glycosyl transferases group 1 FY140_02995 PF13439 Glycosyltransferase Family 4 FY140_03005 PF01757 Acyltransferase family FY140_03015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY140_03015 PF13807 G-rich domain on putative tyrosine kinase FY140_03015 PF02706 Chain length determinant protein FY140_03035 PF13439 Glycosyltransferase Family 4 FY140_03035 PF00534 Glycosyl transferases group 1 FY140_03040 PF13439 Glycosyltransferase Family 4 FY140_03040 PF00534 Glycosyl transferases group 1 FY140_03055 PF03449 Transcription elongation factor, N-terminal FY140_03055 PF01272 Transcription elongation factor, GreA/GreB, C-term FY140_03060 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY140_03060 PF00722 Glycosyl hydrolases family 16 FY140_03090 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY140_03105 PF01381 Helix-turn-helix FY140_03115 PF01717 Cobalamin-independent synthase, Catalytic domain FY140_03115 PF08267 Cobalamin-independent synthase, N-terminal domain FY140_03120 PF00005 ABC transporter FY140_03125 PF02653 Branched-chain amino acid transport system / permease component FY140_03130 PF13407 Periplasmic binding protein domain FY140_03145 PF01022 Bacterial regulatory protein, arsR family FY140_03150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY140_03150 PF01266 FAD dependent oxidoreductase FY140_03160 PF01642 Methylmalonyl-CoA mutase FY140_03160 PF02310 B12 binding domain FY140_03165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_03165 PF02785 Biotin carboxylase C-terminal domain FY140_03165 PF18140 Propionyl-coenzyme A carboxylase BT domain FY140_03165 PF00289 Biotin carboxylase, N-terminal domain FY140_03165 PF00364 Biotin-requiring enzyme FY140_03175 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY140_03185 PF02798 Glutathione S-transferase, N-terminal domain FY140_03190 PF01039 Carboxyl transferase domain FY140_03195 PF06114 IrrE N-terminal-like domain FY140_03195 PF09856 Predicted transcriptional regulator (DUF2083) FY140_03195 PF01381 Helix-turn-helix FY140_03200 PF02805 Metal binding domain of Ada FY140_03200 PF06029 AlkA N-terminal domain FY140_03200 PF12833 Helix-turn-helix domain FY140_03200 PF00730 HhH-GPD superfamily base excision DNA repair protein FY140_03205 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY140_03215 PF00106 short chain dehydrogenase FY140_03225 PF01923 Cobalamin adenosyltransferase FY140_03235 PF01012 Electron transfer flavoprotein domain FY140_03240 PF00766 Electron transfer flavoprotein FAD-binding domain FY140_03240 PF01012 Electron transfer flavoprotein domain FY140_03245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY140_03245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY140_03255 PF08534 Redoxin FY140_03260 PF00206 Lyase FY140_03260 PF14698 Argininosuccinate lyase C-terminal FY140_03270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY140_03270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY140_03280 PF00072 Response regulator receiver domain FY140_03285 PF00156 Phosphoribosyl transferase domain FY140_03295 PF00005 ABC transporter FY140_03315 PF04752 ChaC-like protein FY140_03325 PF02153 Prephenate dehydrogenase FY140_03330 PF00155 Aminotransferase class I and II FY140_03335 PF01209 ubiE/COQ5 methyltransferase family FY140_03340 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY140_03340 PF00753 Metallo-beta-lactamase superfamily FY140_03355 PF00830 Ribosomal L28 family FY140_03360 PF02592 Putative vitamin uptake transporter FY140_03375 PF06213 Cobalamin biosynthesis protein CobT FY140_03375 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY140_03380 PF07728 AAA domain (dynein-related subfamily) FY140_03380 PF08406 CbbQ/NirQ/NorQ C-terminal FY140_03380 PF12556 Cobaltochelatase CobS subunit N terminal FY140_03385 PF00226 DnaJ domain FY140_03390 PF01722 BolA-like protein FY140_03400 PF01761 3-dehydroquinate synthase FY140_03405 PF01202 Shikimate kinase FY140_03415 PF02899 Phage integrase, N-terminal SAM-like domain FY140_03415 PF00589 Phage integrase family FY140_03420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY140_03425 PF03734 L,D-transpeptidase catalytic domain FY140_03430 PF00581 Rhodanese-like domain FY140_03430 PF01206 Sulfurtransferase TusA FY140_03435 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY140_03435 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY140_03440 PF00768 D-alanyl-D-alanine carboxypeptidase FY140_03440 PF07943 Penicillin-binding protein 5, C-terminal domain FY140_03445 PF00239 Resolvase, N terminal domain FY140_03445 PF07508 Recombinase FY140_03445 PF13408 Recombinase zinc beta ribbon domain FY140_03455 PF01695 IstB-like ATP binding protein FY140_03460 PF00665 Integrase core domain FY140_03485 PF01546 Peptidase family M20/M25/M40 FY140_03485 PF07687 Peptidase dimerisation domain FY140_03495 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_03495 PF01464 Transglycosylase SLT domain FY140_03500 PF00330 Aconitase family (aconitate hydratase) FY140_03500 PF00694 Aconitase C-terminal domain FY140_03505 PF07690 Major Facilitator Superfamily FY140_03510 PF10282 Lactonase, 7-bladed beta-propeller FY140_03520 PF01970 Tripartite tricarboxylate transporter TctA family FY140_03540 PF01970 Tripartite tricarboxylate transporter TctA family FY140_03555 PF00672 HAMP domain FY140_03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_03555 PF00512 His Kinase A (phospho-acceptor) domain FY140_03560 PF00486 Transcriptional regulatory protein, C terminal FY140_03560 PF00072 Response regulator receiver domain FY140_03570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_03570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_03585 PF01261 Xylose isomerase-like TIM barrel FY140_03590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY140_03590 PF00205 Thiamine pyrophosphate enzyme, central domain FY140_03590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY140_03595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_03595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_03600 PF00171 Aldehyde dehydrogenase family FY140_03605 PF03328 HpcH/HpaI aldolase/citrate lyase family FY140_03610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_03610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_03615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_03615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_03630 PF02653 Branched-chain amino acid transport system / permease component FY140_03635 PF00005 ABC transporter FY140_03640 PF13407 Periplasmic binding protein domain FY140_03650 PF06832 Penicillin-Binding Protein C-terminus Family FY140_03650 PF00912 Transglycosylase FY140_03650 PF00905 Penicillin binding protein transpeptidase domain FY140_03655 PF07678 A-macroglobulin TED domain FY140_03655 PF17962 Bacterial macroglobulin domain 6 FY140_03655 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY140_03655 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY140_03655 PF01835 MG2 domain FY140_03655 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY140_03655 PF07703 Alpha-2-macroglobulin bait region domain FY140_03655 PF00207 Alpha-2-macroglobulin family FY140_03655 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY140_03660 PF03966 Trm112p-like protein FY140_03670 PF00085 Thioredoxin FY140_03710 PF01842 ACT domain FY140_03710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_03710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_03720 PF13505 Outer membrane protein beta-barrel domain FY140_03725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY140_03725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY140_03725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY140_03725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY140_03730 PF01434 Peptidase family M41 FY140_03730 PF17862 AAA+ lid domain FY140_03730 PF00004 ATPase family associated with various cellular activities (AAA) FY140_03730 PF06480 FtsH Extracellular FY140_03735 PF01171 PP-loop family FY140_03745 PF00691 OmpA family FY140_03750 PF07676 WD40-like Beta Propeller Repeat FY140_03750 PF04052 TolB amino-terminal domain FY140_03760 PF02472 Biopolymer transport protein ExbD/TolR FY140_03765 PF01618 MotA/TolQ/ExbB proton channel family FY140_03770 PF03061 Thioesterase superfamily FY140_03775 PF00293 NUDIX domain FY140_03780 PF00293 NUDIX domain FY140_03795 PF05491 RuvB C-terminal winged helix domain FY140_03795 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY140_03795 PF17864 RuvB AAA lid domain FY140_03800 PF07499 RuvA, C-terminal domain FY140_03800 PF01330 RuvA N terminal domain FY140_03805 PF02075 Crossover junction endodeoxyribonuclease RuvC FY140_03810 PF00672 HAMP domain FY140_03810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_03815 PF00296 Luciferase-like monooxygenase FY140_03820 PF01709 Transcriptional regulator FY140_03835 PF13277 YmdB-like protein FY140_03845 PF00571 CBS domain FY140_03845 PF01595 Cyclin M transmembrane N-terminal domain FY140_03845 PF03471 Transporter associated domain FY140_03865 PF02779 Transketolase, pyrimidine binding domain FY140_03865 PF02780 Transketolase, C-terminal domain FY140_03865 PF00456 Transketolase, thiamine diphosphate binding domain FY140_03870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY140_03870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY140_03875 PF03471 Transporter associated domain FY140_03875 PF00999 Sodium/hydrogen exchanger family FY140_03880 PF00162 Phosphoglycerate kinase FY140_03885 PF00274 Fructose-bisphosphate aldolase class-I FY140_03890 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY140_03890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_03895 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_03895 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY140_03905 PF09339 IclR helix-turn-helix domain FY140_03905 PF01614 Bacterial transcriptional regulator FY140_03915 PF13193 AMP-binding enzyme C-terminal domain FY140_03915 PF00501 AMP-binding enzyme FY140_03940 PF01037 Lrp/AsnC ligand binding domain FY140_03960 PF01197 Ribosomal protein L31 FY140_03965 PF00664 ABC transporter transmembrane region FY140_03965 PF00005 ABC transporter FY140_03970 PF00890 FAD binding domain FY140_03975 PF00691 OmpA family FY140_03975 PF01389 OmpA-like transmembrane domain FY140_03985 PF00459 Inositol monophosphatase family FY140_04015 PF00731 AIR carboxylase FY140_04020 PF02222 ATP-grasp domain FY140_04020 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY140_04025 PF00444 Ribosomal protein L36 FY140_04035 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY140_04055 PF00224 Pyruvate kinase, barrel domain FY140_04055 PF02887 Pyruvate kinase, alpha/beta domain FY140_04060 PF05951 Bacterial protein of unknown function (DUF882) FY140_04065 PF00158 Sigma-54 interaction domain FY140_04065 PF00072 Response regulator receiver domain FY140_04065 PF02954 Bacterial regulatory protein, Fis family FY140_04070 PF01432 Peptidase family M3 FY140_04070 PF08439 Oligopeptidase F FY140_04075 PF01063 Amino-transferase class IV FY140_04080 PF17151 Periplasmic sensor domain FY140_04080 PF00990 Diguanylate cyclase, GGDEF domain FY140_04085 PF16653 Saccharopine dehydrogenase C-terminal domain FY140_04085 PF03435 Saccharopine dehydrogenase NADP binding domain FY140_04095 PF02872 5'-nucleotidase, C-terminal domain FY140_04095 PF00149 Calcineurin-like phosphoesterase FY140_04100 PF00762 Ferrochelatase FY140_04105 PF01145 SPFH domain / Band 7 family FY140_04105 PF16200 C-terminal region of band_7 FY140_04115 PF00571 CBS domain FY140_04115 PF01380 SIS domain FY140_04135 PF00483 Nucleotidyl transferase FY140_04140 PF13406 Transglycosylase SLT domain FY140_04150 PF00486 Transcriptional regulatory protein, C terminal FY140_04150 PF00072 Response regulator receiver domain FY140_04155 PF00672 HAMP domain FY140_04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_04155 PF00512 His Kinase A (phospho-acceptor) domain FY140_04160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY140_04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_04170 PF00310 Glutamine amidotransferases class-II FY140_04170 PF04898 Glutamate synthase central domain FY140_04170 PF01645 Conserved region in glutamate synthase FY140_04170 PF01493 GXGXG motif FY140_04175 PF01212 Beta-eliminating lyase FY140_04180 PF00072 Response regulator receiver domain FY140_04180 PF00486 Transcriptional regulatory protein, C terminal FY140_04185 PF00512 His Kinase A (phospho-acceptor) domain FY140_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_04185 PF02702 Osmosensitive K+ channel His kinase sensor domain FY140_04185 PF13493 Domain of unknown function (DUF4118) FY140_04185 PF13492 GAF domain FY140_04190 PF02669 K+-transporting ATPase, c chain FY140_04200 PF03814 Potassium-transporting ATPase A subunit FY140_04210 PF00710 Asparaginase, N-terminal FY140_04210 PF17763 Glutaminase/Asparaginase C-terminal domain FY140_04215 PF00324 Amino acid permease FY140_04220 PF10415 Fumarase C C-terminus FY140_04220 PF00206 Lyase FY140_04225 PF07729 FCD domain FY140_04225 PF00392 Bacterial regulatory proteins, gntR family FY140_04230 PF00873 AcrB/AcrD/AcrF family FY140_04240 PF00529 HlyD membrane-fusion protein of T1SS FY140_04240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_04250 PF00171 Aldehyde dehydrogenase family FY140_04255 PF08402 TOBE domain FY140_04255 PF00005 ABC transporter FY140_04260 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04265 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04280 PF00171 Aldehyde dehydrogenase family FY140_04285 PF00296 Luciferase-like monooxygenase FY140_04290 PF01613 Flavin reductase like domain FY140_04295 PF12697 Alpha/beta hydrolase family FY140_04305 PF00392 Bacterial regulatory proteins, gntR family FY140_04305 PF07702 UTRA domain FY140_04320 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04325 PF00005 ABC transporter FY140_04325 PF00571 CBS domain FY140_04330 PF00221 Aromatic amino acid lyase FY140_04335 PF07729 FCD domain FY140_04335 PF00392 Bacterial regulatory proteins, gntR family FY140_04340 PF00551 Formyl transferase FY140_04345 PF00120 Glutamine synthetase, catalytic domain FY140_04350 PF01645 Conserved region in glutamate synthase FY140_04355 PF01493 GXGXG motif FY140_04370 PF01965 DJ-1/PfpI family FY140_04370 PF12833 Helix-turn-helix domain FY140_04375 PF01266 FAD dependent oxidoreductase FY140_04380 PF04267 Sarcosine oxidase, delta subunit family FY140_04385 PF01571 Aminomethyltransferase folate-binding domain FY140_04385 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY140_04385 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_04385 PF17806 Sarcosine oxidase A3 domain FY140_04395 PF00356 Bacterial regulatory proteins, lacI family FY140_04405 PF02653 Branched-chain amino acid transport system / permease component FY140_04410 PF00005 ABC transporter FY140_04415 PF01261 Xylose isomerase-like TIM barrel FY140_04420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_04420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_04425 PF01261 Xylose isomerase-like TIM barrel FY140_04430 PF01261 Xylose isomerase-like TIM barrel FY140_04445 PF01695 IstB-like ATP binding protein FY140_04450 PF00665 Integrase core domain FY140_04485 PF13784 Fic/DOC family N-terminal FY140_04485 PF02661 Fic/DOC family FY140_04495 PF12161 HsdM N-terminal domain FY140_04495 PF02384 N-6 DNA Methylase FY140_04500 PF01420 Type I restriction modification DNA specificity domain FY140_04505 PF11867 Domain of unknown function (DUF3387) FY140_04505 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FY140_04505 PF18766 SWI2/SNF2 ATPase FY140_04510 PF01863 Protein of unknown function DUF45 FY140_04525 PF00239 Resolvase, N terminal domain FY140_04525 PF02796 Helix-turn-helix domain of resolvase FY140_04555 PF00701 Dihydrodipicolinate synthetase family FY140_04560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_04560 PF00005 ABC transporter FY140_04565 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_04565 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04570 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_04585 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY140_04590 PF00465 Iron-containing alcohol dehydrogenase FY140_04595 PF07729 FCD domain FY140_04595 PF00392 Bacterial regulatory proteins, gntR family FY140_04610 PF03061 Thioesterase superfamily FY140_04630 PF14403 Circularly permuted ATP-grasp type 2 FY140_04630 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY140_04635 PF01841 Transglutaminase-like superfamily FY140_04635 PF08379 Bacterial transglutaminase-like N-terminal region FY140_04645 PF00005 ABC transporter FY140_04645 PF12848 ABC transporter FY140_04650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_04650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_04655 PF00392 Bacterial regulatory proteins, gntR family FY140_04655 PF07729 FCD domain FY140_04670 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04675 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04680 PF07470 Glycosyl Hydrolase Family 88 FY140_04685 PF17912 MalK OB fold domain FY140_04685 PF00005 ABC transporter FY140_04685 PF03459 TOBE domain FY140_04695 PF01547 Bacterial extracellular solute-binding protein FY140_04705 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY140_04705 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_04705 PF14602 Hexapeptide repeat of succinyl-transferase FY140_04710 PF01070 FMN-dependent dehydrogenase FY140_04725 PF08240 Alcohol dehydrogenase GroES-like domain FY140_04725 PF00107 Zinc-binding dehydrogenase FY140_04730 PF03737 Aldolase/RraA FY140_04735 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_04740 PF00005 ABC transporter FY140_04745 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04750 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04755 PF00106 short chain dehydrogenase FY140_04760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_04760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_04770 PF01370 NAD dependent epimerase/dehydratase family FY140_04775 PF01970 Tripartite tricarboxylate transporter TctA family FY140_04785 PF03737 Aldolase/RraA FY140_04790 PF03401 Tripartite tricarboxylate transporter family receptor FY140_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_04795 PF03466 LysR substrate binding domain FY140_04800 PF00892 EamA-like transporter family FY140_04805 PF00892 EamA-like transporter family FY140_04810 PF00364 Biotin-requiring enzyme FY140_04815 PF00289 Biotin carboxylase, N-terminal domain FY140_04815 PF02785 Biotin carboxylase C-terminal domain FY140_04815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_04825 PF02682 Carboxyltransferase domain, subdomain C and D FY140_04830 PF02626 Carboxyltransferase domain, subdomain A and B FY140_04835 PF03746 LamB/YcsF family FY140_04840 PF00005 ABC transporter FY140_04840 PF08402 TOBE domain FY140_04850 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04855 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04860 PF00155 Aminotransferase class I and II FY140_04865 PF00106 short chain dehydrogenase FY140_04870 PF03466 LysR substrate binding domain FY140_04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_04875 PF00672 HAMP domain FY140_04875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_04880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_04880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_04885 PF01791 DeoC/LacD family aldolase FY140_04890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY140_04890 PF01266 FAD dependent oxidoreductase FY140_04895 PF00248 Aldo/keto reductase family FY140_04905 PF02653 Branched-chain amino acid transport system / permease component FY140_04910 PF00005 ABC transporter FY140_04915 PF13407 Periplasmic binding protein domain FY140_04920 PF00550 Phosphopantetheine attachment site FY140_04930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY140_04930 PF00356 Bacterial regulatory proteins, lacI family FY140_04935 PF04205 FMN-binding domain FY140_04935 PF00890 FAD binding domain FY140_04945 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04950 PF00528 Binding-protein-dependent transport system inner membrane component FY140_04955 PF17912 MalK OB fold domain FY140_04955 PF00005 ABC transporter FY140_04955 PF03459 TOBE domain FY140_04965 PF07549 SecD/SecF GG Motif FY140_04965 PF02355 Protein export membrane protein FY140_04970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_04970 PF03466 LysR substrate binding domain FY140_04975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_04980 PF00701 Dihydrodipicolinate synthetase family FY140_04985 PF01156 Inosine-uridine preferring nucleoside hydrolase FY140_04990 PF01156 Inosine-uridine preferring nucleoside hydrolase FY140_04995 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05000 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05000 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_05005 PF00005 ABC transporter FY140_05005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_05010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_05010 PF00005 ABC transporter FY140_05015 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_05015 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05020 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_05035 PF00072 Response regulator receiver domain FY140_05045 PF00459 Inositol monophosphatase family FY140_05055 PF00011 Hsp20/alpha crystallin family FY140_05060 PF13593 SBF-like CPA transporter family (DUF4137) FY140_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05065 PF03466 LysR substrate binding domain FY140_05070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_05070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_05085 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05090 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05095 PF17912 MalK OB fold domain FY140_05095 PF00005 ABC transporter FY140_05100 PF08402 TOBE domain FY140_05100 PF00005 ABC transporter FY140_05105 PF01266 FAD dependent oxidoreductase FY140_05105 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY140_05110 PF08220 DeoR-like helix-turn-helix domain FY140_05110 PF00455 DeoR C terminal sensor domain FY140_05115 PF10414 Sirohaem synthase dimerisation region FY140_05115 PF14824 Sirohaem biosynthesis protein central FY140_05115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_05120 PF01568 Molydopterin dinucleotide binding domain FY140_05120 PF00384 Molybdopterin oxidoreductase FY140_05120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY140_05120 PF04324 BFD-like [2Fe-2S] binding domain FY140_05130 PF04324 BFD-like [2Fe-2S] binding domain FY140_05130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY140_05130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY140_05130 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_05130 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY140_05135 PF00005 ABC transporter FY140_05140 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05155 PF08376 Nitrate and nitrite sensing FY140_05155 PF03861 ANTAR domain FY140_05160 PF07729 FCD domain FY140_05160 PF00392 Bacterial regulatory proteins, gntR family FY140_05165 PF01566 Natural resistance-associated macrophage protein FY140_05170 PF03746 LamB/YcsF family FY140_05175 PF07286 Protein of unknown function (DUF1445) FY140_05180 PF02682 Carboxyltransferase domain, subdomain C and D FY140_05185 PF00364 Biotin-requiring enzyme FY140_05185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_05185 PF02785 Biotin carboxylase C-terminal domain FY140_05185 PF00289 Biotin carboxylase, N-terminal domain FY140_05190 PF00128 Alpha amylase, catalytic domain FY140_05190 PF02806 Alpha amylase, C-terminal all-beta domain FY140_05195 PF00376 MerR family regulatory protein FY140_05195 PF09278 MerR, DNA binding FY140_05200 PF07715 TonB-dependent Receptor Plug Domain FY140_05200 PF00593 TonB dependent receptor FY140_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05205 PF03466 LysR substrate binding domain FY140_05210 PF06772 Bacterial low temperature requirement A protein (LtrA) FY140_05225 PF03428 Replication protein C N-terminal domain FY140_05225 PF11800 Replication protein C C-terminal region FY140_05230 PF07506 RepB plasmid partitioning protein FY140_05230 PF02195 ParB-like nuclease domain FY140_05235 PF13614 AAA domain FY140_05245 PF01042 Endoribonuclease L-PSP FY140_05250 PF01168 Alanine racemase, N-terminal domain FY140_05250 PF14031 Putative serine dehydratase domain FY140_05255 PF07364 Metallopeptidase family M81 FY140_05255 PF07171 MlrC C-terminus FY140_05260 PF05962 HutD FY140_05265 PF01175 Urocanase Rossmann-like domain FY140_05265 PF17392 Urocanase C-terminal domain FY140_05265 PF17391 Urocanase N-terminal domain FY140_05275 PF00221 Aromatic amino acid lyase FY140_05280 PF01979 Amidohydrolase family FY140_05285 PF01979 Amidohydrolase family FY140_05325 PF00356 Bacterial regulatory proteins, lacI family FY140_05335 PF02653 Branched-chain amino acid transport system / permease component FY140_05340 PF00005 ABC transporter FY140_05350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_05350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_05355 PF01418 Helix-turn-helix domain, rpiR family FY140_05355 PF01380 SIS domain FY140_05360 PF00440 Bacterial regulatory proteins, tetR family FY140_05385 PF01047 MarR family FY140_05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05390 PF03466 LysR substrate binding domain FY140_05395 PF04303 PrpF protein FY140_05405 PF00005 ABC transporter FY140_05410 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05430 PF00672 HAMP domain FY140_05430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_05435 PF03358 NADPH-dependent FMN reductase FY140_05440 PF00296 Luciferase-like monooxygenase FY140_05455 PF03275 UDP-galactopyranose mutase FY140_05465 PF00535 Glycosyl transferase family 2 FY140_05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05475 PF03466 LysR substrate binding domain FY140_05480 PF07690 Major Facilitator Superfamily FY140_05490 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY140_05495 PF03466 LysR substrate binding domain FY140_05495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_05515 PF07969 Amidohydrolase family FY140_05540 PF00440 Bacterial regulatory proteins, tetR family FY140_05545 PF15975 Flotillin FY140_05545 PF01145 SPFH domain / Band 7 family FY140_05555 PF04012 PspA/IM30 family FY140_05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05565 PF03466 LysR substrate binding domain FY140_05570 PF07690 Major Facilitator Superfamily FY140_05575 PF01032 FecCD transport family FY140_05590 PF00593 TonB dependent receptor FY140_05590 PF07715 TonB-dependent Receptor Plug Domain FY140_05610 PF00672 HAMP domain FY140_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_05610 PF00512 His Kinase A (phospho-acceptor) domain FY140_05615 PF00072 Response regulator receiver domain FY140_05615 PF00486 Transcriptional regulatory protein, C terminal FY140_05620 PF01569 PAP2 superfamily FY140_05665 PF13673 Acetyltransferase (GNAT) domain FY140_05670 PF06968 Biotin and Thiamin Synthesis associated domain FY140_05670 PF04055 Radical SAM superfamily FY140_05675 PF00155 Aminotransferase class I and II FY140_05685 PF00202 Aminotransferase class-III FY140_05690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY140_05690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY140_05705 PF00491 Arginase family FY140_05710 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY140_05715 PF00892 EamA-like transporter family FY140_05720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_05720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_05730 PF00211 Adenylate and Guanylate cyclase catalytic domain FY140_05730 PF00672 HAMP domain FY140_05740 PF11972 HTH DNA binding domain FY140_05740 PF07756 Protein of unknown function (DUF1612) FY140_05745 PF00083 Sugar (and other) transporter FY140_05750 PF00512 His Kinase A (phospho-acceptor) domain FY140_05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_05755 PF00072 Response regulator receiver domain FY140_05755 PF00486 Transcriptional regulatory protein, C terminal FY140_05760 PF08019 Phosphoethanolamine transferase EptA/EptB FY140_05760 PF00884 Sulfatase FY140_05770 PF03466 LysR substrate binding domain FY140_05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_05775 PF00593 TonB dependent receptor FY140_05775 PF07715 TonB-dependent Receptor Plug Domain FY140_05785 PF01032 FecCD transport family FY140_05790 PF00005 ABC transporter FY140_05800 PF00034 Cytochrome c FY140_05805 PF02631 RecX family FY140_05810 PF08450 SMP-30/Gluconolactonase/LRE-like region FY140_05820 PF02653 Branched-chain amino acid transport system / permease component FY140_05825 PF00005 ABC transporter FY140_05830 PF13407 Periplasmic binding protein domain FY140_05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_05835 PF07730 Histidine kinase FY140_05840 PF00072 Response regulator receiver domain FY140_05840 PF00196 Bacterial regulatory proteins, luxR family FY140_05850 PF07995 Glucose / Sorbosone dehydrogenase FY140_05860 PF04445 Putative SAM-dependent methyltransferase FY140_05865 PF00849 RNA pseudouridylate synthase FY140_05870 PF01205 Uncharacterized protein family UPF0029 FY140_05875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY140_05875 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_05880 PF00571 CBS domain FY140_05880 PF00005 ABC transporter FY140_05885 PF00528 Binding-protein-dependent transport system inner membrane component FY140_05895 PF00072 Response regulator receiver domain FY140_05895 PF13426 PAS domain FY140_05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_05900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_05905 PF02706 Chain length determinant protein FY140_05905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY140_05905 PF13807 G-rich domain on putative tyrosine kinase FY140_05910 PF00483 Nucleotidyl transferase FY140_05915 PF00535 Glycosyl transferase family 2 FY140_05920 PF00535 Glycosyl transferase family 2 FY140_05925 PF00535 Glycosyl transferase family 2 FY140_05935 PF00722 Glycosyl hydrolases family 16 FY140_05940 PF01757 Acyltransferase family FY140_05945 PF01943 Polysaccharide biosynthesis protein FY140_05950 PF00535 Glycosyl transferase family 2 FY140_05955 PF04230 Polysaccharide pyruvyl transferase FY140_05960 PF00535 Glycosyl transferase family 2 FY140_05965 PF11089 Exopolysaccharide production repressor FY140_05980 PF01165 Ribosomal protein S21 FY140_05985 PF01266 FAD dependent oxidoreductase FY140_06000 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY140_06000 PF01571 Aminomethyltransferase folate-binding domain FY140_06000 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_06000 PF17806 Sarcosine oxidase A3 domain FY140_06015 PF01575 MaoC like domain FY140_06020 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY140_06020 PF18390 Glycogen debranching enzyme C-terminal domain FY140_06020 PF00128 Alpha amylase, catalytic domain FY140_06025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY140_06025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY140_06025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY140_06025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY140_06030 PF08323 Starch synthase catalytic domain FY140_06030 PF00534 Glycosyl transferases group 1 FY140_06035 PF00483 Nucleotidyl transferase FY140_06040 PF00128 Alpha amylase, catalytic domain FY140_06040 PF02806 Alpha amylase, C-terminal all-beta domain FY140_06040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY140_06045 PF00343 Carbohydrate phosphorylase FY140_06055 PF01177 Asp/Glu/Hydantoin racemase FY140_06060 PF01037 Lrp/AsnC ligand binding domain FY140_06070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY140_06070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY140_06080 PF08240 Alcohol dehydrogenase GroES-like domain FY140_06080 PF00107 Zinc-binding dehydrogenase FY140_06090 PF00664 ABC transporter transmembrane region FY140_06090 PF00005 ABC transporter FY140_06095 PF00664 ABC transporter transmembrane region FY140_06095 PF00005 ABC transporter FY140_06100 PF01654 Cytochrome bd terminal oxidase subunit I FY140_06105 PF02322 Cytochrome bd terminal oxidase subunit II FY140_06110 PF08173 Membrane bound YbgT-like protein FY140_06130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY140_06130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY140_06135 PF00890 FAD binding domain FY140_06135 PF02910 Fumarate reductase flavoprotein C-term FY140_06140 PF02445 Quinolinate synthetase A protein FY140_06170 PF02224 Cytidylate kinase FY140_06175 PF00575 S1 RNA binding domain FY140_06205 PF00106 short chain dehydrogenase FY140_06210 PF01321 Creatinase/Prolidase N-terminal domain FY140_06210 PF00557 Metallopeptidase family M24 FY140_06215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_06220 PF00528 Binding-protein-dependent transport system inner membrane component FY140_06225 PF00528 Binding-protein-dependent transport system inner membrane component FY140_06225 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_06230 PF00005 ABC transporter FY140_06230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_06235 PF00005 ABC transporter FY140_06235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_06240 PF08125 Mannitol dehydrogenase C-terminal domain FY140_06240 PF01232 Mannitol dehydrogenase Rossmann domain FY140_06245 PF07729 FCD domain FY140_06245 PF00392 Bacterial regulatory proteins, gntR family FY140_06250 PF13378 Enolase C-terminal domain-like FY140_06250 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_06255 PF00296 Luciferase-like monooxygenase FY140_06270 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY140_06270 PF00005 ABC transporter FY140_06275 PF00005 ABC transporter FY140_06280 PF02653 Branched-chain amino acid transport system / permease component FY140_06285 PF02653 Branched-chain amino acid transport system / permease component FY140_06285 PF11862 Domain of unknown function (DUF3382) FY140_06290 PF05199 GMC oxidoreductase FY140_06290 PF00732 GMC oxidoreductase FY140_06295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY140_06295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY140_06300 PF00501 AMP-binding enzyme FY140_06300 PF13193 AMP-binding enzyme C-terminal domain FY140_06320 PF01011 PQQ enzyme repeat FY140_06325 PF05974 Domain of unknown function (DUF892) FY140_06330 PF02308 MgtC family FY140_06335 PF01266 FAD dependent oxidoreductase FY140_06355 PF01965 DJ-1/PfpI family FY140_06375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY140_06375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY140_06380 PF16363 GDP-mannose 4,6 dehydratase FY140_06385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY140_06385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY140_06385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY140_06395 PF13409 Glutathione S-transferase, N-terminal domain FY140_06400 PF03466 LysR substrate binding domain FY140_06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_06405 PF00171 Aldehyde dehydrogenase family FY140_06410 PF09084 NMT1/THI5 like FY140_06415 PF00528 Binding-protein-dependent transport system inner membrane component FY140_06420 PF00005 ABC transporter FY140_06425 PF00171 Aldehyde dehydrogenase family FY140_06425 PF01619 Proline dehydrogenase FY140_06425 PF14850 DNA-binding domain of Proline dehydrogenase FY140_06425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY140_06430 PF01037 Lrp/AsnC ligand binding domain FY140_06435 PF04542 Sigma-70 region 2 FY140_06435 PF08281 Sigma-70, region 4 FY140_06445 PF00072 Response regulator receiver domain FY140_06450 PF08447 PAS fold FY140_06450 PF13426 PAS domain FY140_06450 PF07536 HWE histidine kinase FY140_06455 PF07536 HWE histidine kinase FY140_06455 PF13581 Histidine kinase-like ATPase domain FY140_06455 PF13426 PAS domain FY140_06465 PF16363 GDP-mannose 4,6 dehydratase FY140_06480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY140_06485 PF03435 Saccharopine dehydrogenase NADP binding domain FY140_06485 PF16653 Saccharopine dehydrogenase C-terminal domain FY140_06490 PF00271 Helicase conserved C-terminal domain FY140_06490 PF00270 DEAD/DEAH box helicase FY140_06495 PF13840 ACT domain FY140_06495 PF01842 ACT domain FY140_06495 PF00696 Amino acid kinase family FY140_06500 PF02896 PEP-utilising enzyme, TIM barrel domain FY140_06500 PF05524 PEP-utilising enzyme, N-terminal FY140_06500 PF01590 GAF domain FY140_06500 PF00391 PEP-utilising enzyme, mobile domain FY140_06505 PF03462 PCRF domain FY140_06505 PF00472 RF-1 domain FY140_06510 PF17827 PrmC N-terminal domain FY140_06510 PF05175 Methyltransferase small domain FY140_06520 PF00004 ATPase family associated with various cellular activities (AAA) FY140_06520 PF07724 AAA domain (Cdc48 subfamily) FY140_06520 PF17871 AAA lid domain FY140_06520 PF02861 Clp amino terminal domain, pathogenicity island component FY140_06520 PF10431 C-terminal, D2-small domain, of ClpB protein FY140_06525 PF10145 Phage-related minor tail protein FY140_06525 PF01551 Peptidase family M23 FY140_06525 PF01464 Transglycosylase SLT domain FY140_06600 PF00580 UvrD/REP helicase N-terminal domain FY140_06600 PF13361 UvrD-like helicase C-terminal domain FY140_06610 PF04542 Sigma-70 region 2 FY140_06610 PF08281 Sigma-70, region 4 FY140_06615 PF13635 Domain of unknown function (DUF4143) FY140_06615 PF13173 AAA domain FY140_06625 PF02195 ParB-like nuclease domain FY140_06670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_06680 PF03707 Bacterial signalling protein N terminal repeat FY140_06680 PF00563 EAL domain FY140_06680 PF13188 PAS domain FY140_06680 PF00990 Diguanylate cyclase, GGDEF domain FY140_06685 PF12833 Helix-turn-helix domain FY140_06685 PF14525 AraC-binding-like domain FY140_06695 PF01584 CheW-like domain FY140_06700 PF02203 Tar ligand binding domain homologue FY140_06700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_06700 PF00672 HAMP domain FY140_06705 PF00436 Single-strand binding protein family FY140_06740 PF13614 AAA domain FY140_06755 PF10502 Signal peptidase, peptidase S26 FY140_06765 PF01464 Transglycosylase SLT domain FY140_06780 PF02534 Type IV secretory system Conjugative DNA transfer FY140_06790 PF00437 Type II/IV secretion system protein FY140_06805 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY140_06820 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY140_06825 PF04335 VirB8 protein FY140_06835 PF03743 Bacterial conjugation TrbI-like protein FY140_06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_06845 PF03466 LysR substrate binding domain FY140_06865 PF13505 Outer membrane protein beta-barrel domain FY140_06885 PF00672 HAMP domain FY140_06885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_06885 PF00512 His Kinase A (phospho-acceptor) domain FY140_06890 PF00072 Response regulator receiver domain FY140_06890 PF00486 Transcriptional regulatory protein, C terminal FY140_06905 PF03466 LysR substrate binding domain FY140_06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_06910 PF13378 Enolase C-terminal domain-like FY140_06910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_06915 PF02426 Muconolactone delta-isomerase FY140_06920 PF04444 Catechol dioxygenase N terminus FY140_06920 PF00775 Dioxygenase FY140_06925 PF00355 Rieske [2Fe-2S] domain FY140_06925 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY140_06930 PF00866 Ring hydroxylating beta subunit FY140_06935 PF00970 Oxidoreductase FAD-binding domain FY140_06935 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_06935 PF00175 Oxidoreductase NAD-binding domain FY140_06940 PF00106 short chain dehydrogenase FY140_06945 PF07690 Major Facilitator Superfamily FY140_06955 PF12146 Serine aminopeptidase, S33 FY140_06975 PF13439 Glycosyltransferase Family 4 FY140_06975 PF00534 Glycosyl transferases group 1 FY140_06980 PF00586 AIR synthase related protein, N-terminal domain FY140_06980 PF02769 AIR synthase related protein, C-terminal domain FY140_06995 PF00795 Carbon-nitrogen hydrolase FY140_07005 PF00155 Aminotransferase class I and II FY140_07005 PF00392 Bacterial regulatory proteins, gntR family FY140_07030 PF00795 Carbon-nitrogen hydrolase FY140_07035 PF00795 Carbon-nitrogen hydrolase FY140_07040 PF14525 AraC-binding-like domain FY140_07060 PF06508 Queuosine biosynthesis protein QueC FY140_07110 PF00486 Transcriptional regulatory protein, C terminal FY140_07110 PF00072 Response regulator receiver domain FY140_07115 PF00989 PAS fold FY140_07115 PF11808 Phosphate regulon sensor protein PhoR FY140_07115 PF00512 His Kinase A (phospho-acceptor) domain FY140_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_07120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_07125 PF12704 MacB-like periplasmic core domain FY140_07125 PF02687 FtsX-like permease family FY140_07125 PF00005 ABC transporter FY140_07135 PF01638 HxlR-like helix-turn-helix FY140_07150 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07155 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07165 PF12792 CSS motif domain associated with EAL FY140_07165 PF00563 EAL domain FY140_07175 PF01695 IstB-like ATP binding protein FY140_07180 PF00665 Integrase core domain FY140_07185 PF02595 Glycerate kinase family FY140_07220 PF00091 Tubulin/FtsZ family, GTPase domain FY140_07220 PF12327 FtsZ family, C-terminal domain FY140_07230 PF00440 Bacterial regulatory proteins, tetR family FY140_07235 PF00529 HlyD membrane-fusion protein of T1SS FY140_07235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_07240 PF00873 AcrB/AcrD/AcrF family FY140_07245 PF00106 short chain dehydrogenase FY140_07255 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_07260 PF16859 Tetracyclin repressor-like, C-terminal domain FY140_07260 PF00440 Bacterial regulatory proteins, tetR family FY140_07265 PF01209 ubiE/COQ5 methyltransferase family FY140_07275 PF03358 NADPH-dependent FMN reductase FY140_07275 PF01566 Natural resistance-associated macrophage protein FY140_07290 PF06628 Catalase-related immune-responsive FY140_07290 PF18011 C-terminal domain found in long catalases FY140_07290 PF00199 Catalase FY140_07295 PF05974 Domain of unknown function (DUF892) FY140_07325 PF08281 Sigma-70, region 4 FY140_07325 PF04542 Sigma-70 region 2 FY140_07355 PF03167 Uracil DNA glycosylase superfamily FY140_07400 PF00571 CBS domain FY140_07400 PF00005 ABC transporter FY140_07410 PF03466 LysR substrate binding domain FY140_07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_07415 PF03746 LamB/YcsF family FY140_07425 PF02785 Biotin carboxylase C-terminal domain FY140_07425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_07425 PF00289 Biotin carboxylase, N-terminal domain FY140_07435 PF02626 Carboxyltransferase domain, subdomain A and B FY140_07440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY140_07445 PF00005 ABC transporter FY140_07450 PF02653 Branched-chain amino acid transport system / permease component FY140_07455 PF13478 XdhC Rossmann domain FY140_07455 PF02625 XdhC and CoxI family FY140_07465 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_07465 PF01799 [2Fe-2S] binding domain FY140_07470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY140_07470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY140_07480 PF00202 Aminotransferase class-III FY140_07485 PF00171 Aldehyde dehydrogenase family FY140_07490 PF12804 MobA-like NTP transferase domain FY140_07500 PF02734 DAK2 domain FY140_07500 PF02733 Dak1 domain FY140_07505 PF01037 Lrp/AsnC ligand binding domain FY140_07510 PF01053 Cys/Met metabolism PLP-dependent enzyme FY140_07515 PF17200 Single Cache domain 2 FY140_07515 PF07730 Histidine kinase FY140_07520 PF00072 Response regulator receiver domain FY140_07520 PF00196 Bacterial regulatory proteins, luxR family FY140_07525 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_07530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_07545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY140_07550 PF00296 Luciferase-like monooxygenase FY140_07560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_07560 PF00005 ABC transporter FY140_07565 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_07565 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07570 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_07580 PF01568 Molydopterin dinucleotide binding domain FY140_07580 PF00384 Molybdopterin oxidoreductase FY140_07585 PF01565 FAD binding domain FY140_07585 PF02913 FAD linked oxidases, C-terminal domain FY140_07590 PF01323 DSBA-like thioredoxin domain FY140_07610 PF03466 LysR substrate binding domain FY140_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_07625 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07630 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07635 PF00005 ABC transporter FY140_07635 PF17912 MalK OB fold domain FY140_07640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_07640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_07640 PF01842 ACT domain FY140_07645 PF00701 Dihydrodipicolinate synthetase family FY140_07650 PF00480 ROK family FY140_07660 PF00005 ABC transporter FY140_07660 PF08402 TOBE domain FY140_07665 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07675 PF00196 Bacterial regulatory proteins, luxR family FY140_07695 PF00005 ABC transporter FY140_07695 PF08402 TOBE domain FY140_07705 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07710 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07715 PF01177 Asp/Glu/Hydantoin racemase FY140_07725 PF00392 Bacterial regulatory proteins, gntR family FY140_07725 PF00155 Aminotransferase class I and II FY140_07740 PF02567 Phenazine biosynthesis-like protein FY140_07745 PF00293 NUDIX domain FY140_07750 PF03466 LysR substrate binding domain FY140_07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_07760 PF03466 LysR substrate binding domain FY140_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_07765 PF00857 Isochorismatase family FY140_07780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY140_07785 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY140_07790 PF00510 Cytochrome c oxidase subunit III FY140_07795 PF00510 Cytochrome c oxidase subunit III FY140_07805 PF05544 Proline racemase FY140_07810 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07815 PF00528 Binding-protein-dependent transport system inner membrane component FY140_07820 PF00571 CBS domain FY140_07820 PF00005 ABC transporter FY140_07830 PF01266 FAD dependent oxidoreductase FY140_07835 PF00171 Aldehyde dehydrogenase family FY140_07840 PF00701 Dihydrodipicolinate synthetase family FY140_07855 PF01266 FAD dependent oxidoreductase FY140_07865 PF01571 Aminomethyltransferase folate-binding domain FY140_07865 PF17806 Sarcosine oxidase A3 domain FY140_07865 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_07865 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY140_07875 PF00464 Serine hydroxymethyltransferase FY140_07880 PF03313 Serine dehydratase alpha chain FY140_07880 PF03315 Serine dehydratase beta chain FY140_07885 PF00551 Formyl transferase FY140_07890 PF08021 Siderophore-interacting FAD-binding domain FY140_07890 PF04954 Siderophore-interacting protein FY140_07895 PF01032 FecCD transport family FY140_07900 PF01497 Periplasmic binding protein FY140_07905 PF07715 TonB-dependent Receptor Plug Domain FY140_07905 PF07660 Secretin and TonB N terminus short domain FY140_07905 PF00593 TonB dependent receptor FY140_07925 PF00440 Bacterial regulatory proteins, tetR family FY140_07935 PF08240 Alcohol dehydrogenase GroES-like domain FY140_07935 PF00107 Zinc-binding dehydrogenase FY140_07940 PF12833 Helix-turn-helix domain FY140_07945 PF13407 Periplasmic binding protein domain FY140_07950 PF00005 ABC transporter FY140_07955 PF02653 Branched-chain amino acid transport system / permease component FY140_07960 PF00106 short chain dehydrogenase FY140_07965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_07965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_07980 PF02563 Polysaccharide biosynthesis/export protein FY140_07995 PF06761 Intracellular multiplication and human macrophage-killing FY140_07995 PF14331 ImcF-related N-terminal domain FY140_07995 PF06744 Type VI secretion protein IcmF C-terminal FY140_08000 PF00691 OmpA family FY140_08005 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY140_08020 PF05947 Type VI secretion system, TssF FY140_08040 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY140_08045 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY140_08055 PF07724 AAA domain (Cdc48 subfamily) FY140_08055 PF00004 ATPase family associated with various cellular activities (AAA) FY140_08055 PF17871 AAA lid domain FY140_08055 PF10431 C-terminal, D2-small domain, of ClpB protein FY140_08075 PF04717 Type VI secretion system, phage-baseplate injector FY140_08075 PF06715 Gp5 C-terminal repeat (3 copies) FY140_08110 PF00990 Diguanylate cyclase, GGDEF domain FY140_08110 PF03707 Bacterial signalling protein N terminal repeat FY140_08110 PF13188 PAS domain FY140_08110 PF00563 EAL domain FY140_08115 PF00459 Inositol monophosphatase family FY140_08130 PF00356 Bacterial regulatory proteins, lacI family FY140_08140 PF17912 MalK OB fold domain FY140_08140 PF03459 TOBE domain FY140_08140 PF00005 ABC transporter FY140_08145 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08150 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08155 PF13416 Bacterial extracellular solute-binding protein FY140_08160 PF01261 Xylose isomerase-like TIM barrel FY140_08165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_08165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_08170 PF00356 Bacterial regulatory proteins, lacI family FY140_08185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_08185 PF03466 LysR substrate binding domain FY140_08195 PF13407 Periplasmic binding protein domain FY140_08200 PF00005 ABC transporter FY140_08205 PF02653 Branched-chain amino acid transport system / permease component FY140_08210 PF02653 Branched-chain amino acid transport system / permease component FY140_08215 PF00356 Bacterial regulatory proteins, lacI family FY140_08225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_08225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_08245 PF00034 Cytochrome c FY140_08260 PF00394 Multicopper oxidase FY140_08260 PF07732 Multicopper oxidase FY140_08280 PF00092 von Willebrand factor type A domain FY140_08285 PF07728 AAA domain (dynein-related subfamily) FY140_08285 PF08406 CbbQ/NirQ/NorQ C-terminal FY140_08290 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY140_08295 PF00034 Cytochrome c FY140_08305 PF00510 Cytochrome c oxidase subunit III FY140_08315 PF02441 Flavoprotein FY140_08320 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY140_08325 PF04343 Protein of unknown function, DUF488 FY140_08335 PF01136 Peptidase family U32 FY140_08360 PF00005 ABC transporter FY140_08370 PF06796 Periplasmic nitrate reductase protein NapE FY140_08385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY140_08385 PF00384 Molybdopterin oxidoreductase FY140_08385 PF01568 Molydopterin dinucleotide binding domain FY140_08390 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY140_08395 PF03264 NapC/NirT cytochrome c family, N-terminal region FY140_08400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_08400 PF03466 LysR substrate binding domain FY140_08410 PF00392 Bacterial regulatory proteins, gntR family FY140_08410 PF07702 UTRA domain FY140_08420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_08420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_08435 PF00834 Ribulose-phosphate 3 epimerase family FY140_08440 PF00455 DeoR C terminal sensor domain FY140_08440 PF08220 DeoR-like helix-turn-helix domain FY140_08445 PF00005 ABC transporter FY140_08450 PF02653 Branched-chain amino acid transport system / permease component FY140_08455 PF13407 Periplasmic binding protein domain FY140_08460 PF04198 Putative sugar-binding domain FY140_08465 PF01791 DeoC/LacD family aldolase FY140_08470 PF00480 ROK family FY140_08475 PF00171 Aldehyde dehydrogenase family FY140_08480 PF00005 ABC transporter FY140_08480 PF00664 ABC transporter transmembrane region FY140_08485 PF00529 HlyD membrane-fusion protein of T1SS FY140_08485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_08495 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY140_08495 PF01648 4'-phosphopantetheinyl transferase superfamily FY140_08505 PF00857 Isochorismatase family FY140_08505 PF00550 Phosphopantetheine attachment site FY140_08510 PF13193 AMP-binding enzyme C-terminal domain FY140_08510 PF00501 AMP-binding enzyme FY140_08515 PF00425 chorismate binding enzyme FY140_08520 PF13193 AMP-binding enzyme C-terminal domain FY140_08520 PF00501 AMP-binding enzyme FY140_08520 PF00550 Phosphopantetheine attachment site FY140_08520 PF00668 Condensation domain FY140_08525 PF00975 Thioesterase domain FY140_08525 PF00550 Phosphopantetheine attachment site FY140_08525 PF00668 Condensation domain FY140_08525 PF00501 AMP-binding enzyme FY140_08530 PF00550 Phosphopantetheine attachment site FY140_08530 PF00975 Thioesterase domain FY140_08530 PF13193 AMP-binding enzyme C-terminal domain FY140_08530 PF00668 Condensation domain FY140_08530 PF00501 AMP-binding enzyme FY140_08540 PF08021 Siderophore-interacting FAD-binding domain FY140_08540 PF04954 Siderophore-interacting protein FY140_08550 PF01032 FecCD transport family FY140_08555 PF01032 FecCD transport family FY140_08560 PF00005 ABC transporter FY140_08565 PF00296 Luciferase-like monooxygenase FY140_08575 PF07715 TonB-dependent Receptor Plug Domain FY140_08580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_08580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY140_08580 PF02770 Acyl-CoA dehydrogenase, middle domain FY140_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_08585 PF03466 LysR substrate binding domain FY140_08590 PF00356 Bacterial regulatory proteins, lacI family FY140_08600 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08610 PF00005 ABC transporter FY140_08610 PF08402 TOBE domain FY140_08620 PF01979 Amidohydrolase family FY140_08620 PF13382 Adenine deaminase C-terminal domain FY140_08625 PF03466 LysR substrate binding domain FY140_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_08630 PF07690 Major Facilitator Superfamily FY140_08635 PF07687 Peptidase dimerisation domain FY140_08635 PF01546 Peptidase family M20/M25/M40 FY140_08645 PF01244 Membrane dipeptidase (Peptidase family M19) FY140_08650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_08655 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08660 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08660 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_08665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_08665 PF00005 ABC transporter FY140_08670 PF00005 ABC transporter FY140_08670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_08675 PF03466 LysR substrate binding domain FY140_08675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_08680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_08685 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08690 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08690 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_08695 PF01425 Amidase FY140_08700 PF01965 DJ-1/PfpI family FY140_08710 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_08710 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08715 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_08725 PF07687 Peptidase dimerisation domain FY140_08725 PF01546 Peptidase family M20/M25/M40 FY140_08730 PF00005 ABC transporter FY140_08730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_08735 PF04198 Putative sugar-binding domain FY140_08745 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08750 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08755 PF00005 ABC transporter FY140_08755 PF08402 TOBE domain FY140_08765 PF01232 Mannitol dehydrogenase Rossmann domain FY140_08765 PF08125 Mannitol dehydrogenase C-terminal domain FY140_08770 PF13419 Haloacid dehalogenase-like hydrolase FY140_08775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_08775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_08795 PF00730 HhH-GPD superfamily base excision DNA repair protein FY140_08795 PF00633 Helix-hairpin-helix motif FY140_08795 PF10576 Iron-sulfur binding domain of endonuclease III FY140_08805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY140_08805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY140_08820 PF13936 Helix-turn-helix domain FY140_08820 PF04198 Putative sugar-binding domain FY140_08825 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY140_08830 PF01614 Bacterial transcriptional regulator FY140_08830 PF09339 IclR helix-turn-helix domain FY140_08845 PF00950 ABC 3 transport family FY140_08850 PF00950 ABC 3 transport family FY140_08855 PF00005 ABC transporter FY140_08860 PF01297 Zinc-uptake complex component A periplasmic FY140_08870 PF01734 Patatin-like phospholipase FY140_08875 PF00152 tRNA synthetases class II (D, K and N) FY140_08875 PF01336 OB-fold nucleic acid binding domain FY140_08880 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY140_08885 PF03600 Citrate transporter FY140_08885 PF02080 TrkA-C domain FY140_08895 PF03471 Transporter associated domain FY140_08895 PF03741 Integral membrane protein TerC family FY140_08900 PF00440 Bacterial regulatory proteins, tetR family FY140_08905 PF13533 Biotin-lipoyl like FY140_08910 PF07690 Major Facilitator Superfamily FY140_08925 PF00356 Bacterial regulatory proteins, lacI family FY140_08925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY140_08930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_08930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_08935 PF01261 Xylose isomerase-like TIM barrel FY140_08940 PF00232 Glycosyl hydrolase family 1 FY140_08950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_08960 PF01547 Bacterial extracellular solute-binding protein FY140_08965 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08970 PF00528 Binding-protein-dependent transport system inner membrane component FY140_08975 PF03459 TOBE domain FY140_08975 PF17912 MalK OB fold domain FY140_08975 PF00005 ABC transporter FY140_08985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_08985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_08990 PF13660 Domain of unknown function (DUF4147) FY140_08990 PF05161 MOFRL family FY140_09010 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY140_09010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY140_09010 PF14579 Helix-hairpin-helix motif FY140_09010 PF02811 PHP domain FY140_09010 PF01336 OB-fold nucleic acid binding domain FY140_09025 PF07729 FCD domain FY140_09025 PF00392 Bacterial regulatory proteins, gntR family FY140_09030 PF02653 Branched-chain amino acid transport system / permease component FY140_09035 PF02653 Branched-chain amino acid transport system / permease component FY140_09040 PF00005 ABC transporter FY140_09045 PF13407 Periplasmic binding protein domain FY140_09050 PF00920 Dehydratase family FY140_09060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_09065 PF12833 Helix-turn-helix domain FY140_09075 PF00266 Aminotransferase class-V FY140_09080 PF00005 ABC transporter FY140_09080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_09085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_09085 PF00005 ABC transporter FY140_09090 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09095 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_09105 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY140_09105 PF17854 FtsK alpha domain FY140_09105 PF01580 FtsK/SpoIIIE family FY140_09105 PF09397 Ftsk gamma domain FY140_09110 PF02615 Malate/L-lactate dehydrogenase FY140_09115 PF00990 Diguanylate cyclase, GGDEF domain FY140_09115 PF03707 Bacterial signalling protein N terminal repeat FY140_09115 PF00563 EAL domain FY140_09125 PF05899 Protein of unknown function (DUF861) FY140_09125 PF07883 Cupin domain FY140_09130 PF00990 Diguanylate cyclase, GGDEF domain FY140_09130 PF17151 Periplasmic sensor domain FY140_09135 PF00529 HlyD membrane-fusion protein of T1SS FY140_09135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_09140 PF00873 AcrB/AcrD/AcrF family FY140_09145 PF08361 MAATS-type transcriptional repressor, C-terminal region FY140_09145 PF00440 Bacterial regulatory proteins, tetR family FY140_09150 PF00005 ABC transporter FY140_09155 PF02653 Branched-chain amino acid transport system / permease component FY140_09160 PF13407 Periplasmic binding protein domain FY140_09165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_09165 PF03466 LysR substrate binding domain FY140_09170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY140_09170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY140_09190 PF03922 OmpW family FY140_09200 PF08402 TOBE domain FY140_09200 PF00005 ABC transporter FY140_09205 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09210 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09215 PF13416 Bacterial extracellular solute-binding protein FY140_09220 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY140_09220 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY140_09235 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY140_09235 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY140_09240 PF00005 ABC transporter FY140_09245 PF00950 ABC 3 transport family FY140_09250 PF01297 Zinc-uptake complex component A periplasmic FY140_09255 PF00075 RNase H FY140_09265 PF01053 Cys/Met metabolism PLP-dependent enzyme FY140_09270 PF01547 Bacterial extracellular solute-binding protein FY140_09275 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09280 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09285 PF00005 ABC transporter FY140_09285 PF17912 MalK OB fold domain FY140_09290 PF08402 TOBE domain FY140_09290 PF00005 ABC transporter FY140_09295 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09300 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09305 PF08013 Tagatose 6 phosphate kinase FY140_09310 PF00294 pfkB family carbohydrate kinase FY140_09325 PF16912 Glucose dehydrogenase C-terminus FY140_09325 PF08240 Alcohol dehydrogenase GroES-like domain FY140_09330 PF00356 Bacterial regulatory proteins, lacI family FY140_09345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY140_09345 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY140_09350 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_09360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_09365 PF03466 LysR substrate binding domain FY140_09370 PF07690 Major Facilitator Superfamily FY140_09385 PF13416 Bacterial extracellular solute-binding protein FY140_09390 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09395 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09400 PF00005 ABC transporter FY140_09400 PF17912 MalK OB fold domain FY140_09405 PF00248 Aldo/keto reductase family FY140_09420 PF07729 FCD domain FY140_09420 PF00392 Bacterial regulatory proteins, gntR family FY140_09425 PF01370 NAD dependent epimerase/dehydratase family FY140_09430 PF04962 KduI/IolB family FY140_09440 PF00701 Dihydrodipicolinate synthetase family FY140_09445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_09445 PF13378 Enolase C-terminal domain-like FY140_09450 PF04909 Amidohydrolase FY140_09455 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_09465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_09470 PF02311 AraC-like ligand binding domain FY140_09470 PF12833 Helix-turn-helix domain FY140_09475 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09480 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09485 PF00005 ABC transporter FY140_09485 PF08402 TOBE domain FY140_09495 PF00295 Glycosyl hydrolases family 28 FY140_09500 PF07470 Glycosyl Hydrolase Family 88 FY140_09505 PF00512 His Kinase A (phospho-acceptor) domain FY140_09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_09505 PF00672 HAMP domain FY140_09510 PF00072 Response regulator receiver domain FY140_09510 PF00486 Transcriptional regulatory protein, C terminal FY140_09525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_09530 PF12704 MacB-like periplasmic core domain FY140_09530 PF02687 FtsX-like permease family FY140_09530 PF00005 ABC transporter FY140_09535 PF00550 Phosphopantetheine attachment site FY140_09560 PF00313 'Cold-shock' DNA-binding domain FY140_09565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_09565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_09580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_09580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_09585 PF00440 Bacterial regulatory proteins, tetR family FY140_09585 PF17938 Tetracyclin repressor-like, C-terminal domain FY140_09590 PF13416 Bacterial extracellular solute-binding protein FY140_09595 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09600 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09605 PF17912 MalK OB fold domain FY140_09605 PF00005 ABC transporter FY140_09605 PF03459 TOBE domain FY140_09610 PF01261 Xylose isomerase-like TIM barrel FY140_09615 PF01842 ACT domain FY140_09615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_09615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_09625 PF00356 Bacterial regulatory proteins, lacI family FY140_09640 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY140_09645 PF17912 MalK OB fold domain FY140_09645 PF00005 ABC transporter FY140_09655 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09660 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09665 PF00005 ABC transporter FY140_09670 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09675 PF09084 NMT1/THI5 like FY140_09680 PF00296 Luciferase-like monooxygenase FY140_09685 PF00005 ABC transporter FY140_09685 PF17912 MalK OB fold domain FY140_09690 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09695 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09700 PF13416 Bacterial extracellular solute-binding protein FY140_09710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_09710 PF13426 PAS domain FY140_09710 PF08447 PAS fold FY140_09735 PF00005 ABC transporter FY140_09735 PF08402 TOBE domain FY140_09745 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09750 PF00528 Binding-protein-dependent transport system inner membrane component FY140_09755 PF01177 Asp/Glu/Hydantoin racemase FY140_09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_09790 PF03466 LysR substrate binding domain FY140_09795 PF00144 Beta-lactamase FY140_09800 PF00860 Permease family FY140_09805 PF13460 NAD(P)H-binding FY140_09815 PF01494 FAD binding domain FY140_09820 PF00190 Cupin FY140_09830 PF00196 Bacterial regulatory proteins, luxR family FY140_09830 PF00072 Response regulator receiver domain FY140_09835 PF00196 Bacterial regulatory proteins, luxR family FY140_09835 PF00072 Response regulator receiver domain FY140_09840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_09840 PF00512 His Kinase A (phospho-acceptor) domain FY140_09840 PF08448 PAS fold FY140_09840 PF13426 PAS domain FY140_09840 PF00072 Response regulator receiver domain FY140_09845 PF00384 Molybdopterin oxidoreductase FY140_09850 PF00210 Ferritin-like domain FY140_09855 PF00561 alpha/beta hydrolase fold FY140_09865 PF06441 Epoxide hydrolase N terminus FY140_09870 PF00171 Aldehyde dehydrogenase family FY140_09875 PF02566 OsmC-like protein FY140_09880 PF00512 His Kinase A (phospho-acceptor) domain FY140_09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_09880 PF00672 HAMP domain FY140_09885 PF00486 Transcriptional regulatory protein, C terminal FY140_09885 PF00072 Response regulator receiver domain FY140_09890 PF00561 alpha/beta hydrolase fold FY140_09900 PF17991 Thioredoxin like C-terminal domain FY140_09900 PF02683 Cytochrome C biogenesis protein transmembrane region FY140_09900 PF00578 AhpC/TSA family FY140_09920 PF07690 Major Facilitator Superfamily FY140_09925 PF00561 alpha/beta hydrolase fold FY140_09945 PF00005 ABC transporter FY140_09945 PF06472 ABC transporter transmembrane region 2 FY140_10005 PF00691 OmpA family FY140_10005 PF04972 BON domain FY140_10015 PF12419 SNF2 Helicase protein FY140_10015 PF00271 Helicase conserved C-terminal domain FY140_10015 PF00176 SNF2 family N-terminal domain FY140_10035 PF00664 ABC transporter transmembrane region FY140_10035 PF00005 ABC transporter FY140_10110 PF00665 Integrase core domain FY140_10115 PF01695 IstB-like ATP binding protein FY140_10150 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_10190 PF04717 Type VI secretion system, phage-baseplate injector FY140_10190 PF06715 Gp5 C-terminal repeat (3 copies) FY140_10210 PF05593 RHS Repeat FY140_10210 PF05488 PAAR motif FY140_10255 PF01063 Amino-transferase class IV FY140_10270 PF11638 DnaA N-terminal domain FY140_10270 PF08299 Bacterial dnaA protein helix-turn-helix FY140_10270 PF00308 Bacterial dnaA protein FY140_10275 PF04055 Radical SAM superfamily FY140_10275 PF06969 HemN C-terminal domain FY140_10280 PF01725 Ham1 family FY140_10285 PF01138 3' exoribonuclease family, domain 1 FY140_10285 PF03725 3' exoribonuclease family, domain 2 FY140_10290 PF01628 HrcA protein C terminal domain FY140_10295 PF01025 GrpE FY140_10300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY140_10305 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY140_10305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY140_10310 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY140_10310 PF04963 Sigma-54 factor, core binding domain FY140_10310 PF04552 Sigma-54, DNA binding domain FY140_10315 PF00005 ABC transporter FY140_10320 PF03968 OstA-like protein FY140_10330 PF01343 Peptidase family S49 FY140_10335 PF00216 Bacterial DNA-binding protein FY140_10345 PF01170 Putative RNA methylase family UPF0020 FY140_10345 PF02926 THUMP domain FY140_10345 PF10672 S-adenosylmethionine-dependent methyltransferase FY140_10350 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY140_10350 PF00588 SpoU rRNA Methylase family FY140_10355 PF01252 Signal peptidase (SPase) II FY140_10360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_10360 PF00672 HAMP domain FY140_10360 PF00512 His Kinase A (phospho-acceptor) domain FY140_10360 PF01627 Hpt domain FY140_10360 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY140_10360 PF00072 Response regulator receiver domain FY140_10370 PF01624 MutS domain I FY140_10370 PF05188 MutS domain II FY140_10370 PF05192 MutS domain III FY140_10370 PF05190 MutS family domain IV FY140_10370 PF00488 MutS domain V FY140_10375 PF01842 ACT domain FY140_10375 PF01966 HD domain FY140_10375 PF01909 Nucleotidyltransferase domain FY140_10375 PF08335 GlnD PII-uridylyltransferase FY140_10380 PF03023 Lipid II flippase MurJ FY140_10390 PF00579 tRNA synthetases class I (W and Y) FY140_10400 PF01106 NifU-like domain FY140_10405 PF00814 Glycoprotease family FY140_10410 PF00583 Acetyltransferase (GNAT) family FY140_10410 PF13508 Acetyltransferase (GNAT) domain FY140_10415 PF01475 Ferric uptake regulator family FY140_10420 PF01553 Acyltransferase FY140_10425 PF04055 Radical SAM superfamily FY140_10425 PF00919 Uncharacterized protein family UPF0004 FY140_10425 PF01938 TRAM domain FY140_10430 PF02562 PhoH-like protein FY140_10435 PF02130 Uncharacterized protein family UPF0054 FY140_10440 PF00571 CBS domain FY140_10440 PF03471 Transporter associated domain FY140_10445 PF00795 Carbon-nitrogen hydrolase FY140_10450 PF01381 Helix-turn-helix FY140_10455 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY140_10455 PF02772 S-adenosylmethionine synthetase, central domain FY140_10455 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY140_10460 PF02390 Putative methyltransferase FY140_10465 PF00294 pfkB family carbohydrate kinase FY140_10470 PF02646 RmuC family FY140_10475 PF01327 Polypeptide deformylase FY140_10480 PF02911 Formyl transferase, C-terminal domain FY140_10480 PF00551 Formyl transferase FY140_10485 PF01416 tRNA pseudouridine synthase FY140_10495 PF07687 Peptidase dimerisation domain FY140_10495 PF01546 Peptidase family M20/M25/M40 FY140_10500 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_10500 PF14602 Hexapeptide repeat of succinyl-transferase FY140_10500 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY140_10510 PF00672 HAMP domain FY140_10510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_10515 PF01156 Inosine-uridine preferring nucleoside hydrolase FY140_10520 PF00011 Hsp20/alpha crystallin family FY140_10545 PF00696 Amino acid kinase family FY140_10555 PF01926 50S ribosome-binding GTPase FY140_10560 PF14849 YidC periplasmic domain FY140_10560 PF02096 60Kd inner membrane protein FY140_10565 PF00825 Ribonuclease P FY140_10570 PF00468 Ribosomal protein L34 FY140_10575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_10575 PF00672 HAMP domain FY140_10580 PF00512 His Kinase A (phospho-acceptor) domain FY140_10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_10590 PF01209 ubiE/COQ5 methyltransferase family FY140_10595 PF00005 ABC transporter FY140_10600 PF00528 Binding-protein-dependent transport system inner membrane component FY140_10605 PF00528 Binding-protein-dependent transport system inner membrane component FY140_10615 PF00149 Calcineurin-like phosphoesterase FY140_10620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY140_10620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY140_10630 PF05544 Proline racemase FY140_10635 PF01979 Amidohydrolase family FY140_10640 PF00156 Phosphoribosyl transferase domain FY140_10645 PF00294 pfkB family carbohydrate kinase FY140_10660 PF00342 Phosphoglucose isomerase FY140_10665 PF13193 AMP-binding enzyme C-terminal domain FY140_10665 PF00501 AMP-binding enzyme FY140_10670 PF08402 TOBE domain FY140_10670 PF00005 ABC transporter FY140_10680 PF00528 Binding-protein-dependent transport system inner membrane component FY140_10685 PF07715 TonB-dependent Receptor Plug Domain FY140_10685 PF00593 TonB dependent receptor FY140_10705 PF01679 Proteolipid membrane potential modulator FY140_10725 PF03976 Polyphosphate kinase 2 (PPK2) FY140_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_10730 PF00989 PAS fold FY140_10730 PF16736 Single Cache-like FY140_10730 PF00512 His Kinase A (phospho-acceptor) domain FY140_10735 PF12849 PBP superfamily domain FY140_10740 PF00528 Binding-protein-dependent transport system inner membrane component FY140_10745 PF00528 Binding-protein-dependent transport system inner membrane component FY140_10750 PF00005 ABC transporter FY140_10755 PF01895 PhoU domain FY140_10760 PF00072 Response regulator receiver domain FY140_10760 PF00486 Transcriptional regulatory protein, C terminal FY140_10770 PF00202 Aminotransferase class-III FY140_10775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY140_10775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY140_10780 PF01430 Hsp33 protein FY140_10785 PF04379 ApaG domain FY140_10790 PF01053 Cys/Met metabolism PLP-dependent enzyme FY140_10800 PF00692 dUTPase FY140_10810 PF08479 POTRA domain, ShlB-type FY140_10810 PF17287 POTRA domain FY140_10810 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FY140_10825 PF00230 Major intrinsic protein FY140_10865 PF00072 Response regulator receiver domain FY140_10865 PF00196 Bacterial regulatory proteins, luxR family FY140_10875 PF01180 Dihydroorotate dehydrogenase FY140_10890 PF08241 Methyltransferase domain FY140_10910 PF02082 Transcriptional regulator FY140_10915 PF00271 Helicase conserved C-terminal domain FY140_10915 PF00270 DEAD/DEAH box helicase FY140_10915 PF08494 DEAD/H associated FY140_10935 PF01925 Sulfite exporter TauE/SafE FY140_10945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY140_10945 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY140_10945 PF02770 Acyl-CoA dehydrogenase, middle domain FY140_10945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_10950 PF00108 Thiolase, N-terminal domain FY140_10950 PF02803 Thiolase, C-terminal domain FY140_10955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY140_10955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY140_10955 PF00378 Enoyl-CoA hydratase/isomerase FY140_10985 PF03334 Na+/H+ antiporter subunit FY140_10990 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY140_10995 PF01899 Na+/H+ ion antiporter subunit FY140_11000 PF00361 Proton-conducting membrane transporter FY140_11005 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY140_11010 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY140_11010 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY140_11010 PF00361 Proton-conducting membrane transporter FY140_11010 PF13244 Domain of unknown function (DUF4040) FY140_11020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_11030 PF00072 Response regulator receiver domain FY140_11035 PF01627 Hpt domain FY140_11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_11035 PF01584 CheW-like domain FY140_11035 PF02895 Signal transducing histidine kinase, homodimeric domain FY140_11040 PF03705 CheR methyltransferase, all-alpha domain FY140_11040 PF01739 CheR methyltransferase, SAM binding domain FY140_11045 PF00072 Response regulator receiver domain FY140_11045 PF01339 CheB methylesterase FY140_11050 PF00072 Response regulator receiver domain FY140_11055 PF03975 CheD chemotactic sensory transduction FY140_11065 PF01514 Secretory protein of YscJ/FliF family FY140_11065 PF08345 Flagellar M-ring protein C-terminal FY140_11070 PF03472 Autoinducer binding domain FY140_11070 PF00196 Bacterial regulatory proteins, luxR family FY140_11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_11080 PF00672 HAMP domain FY140_11085 PF00512 His Kinase A (phospho-acceptor) domain FY140_11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_11085 PF00672 HAMP domain FY140_11085 PF00072 Response regulator receiver domain FY140_11085 PF01627 Hpt domain FY140_11090 PF01741 Large-conductance mechanosensitive channel, MscL FY140_11095 PF00155 Aminotransferase class I and II FY140_11100 PF01370 NAD dependent epimerase/dehydratase family FY140_11110 PF03884 DNA gyrase inhibitor YacG FY140_11115 PF02545 Maf-like protein FY140_11120 PF01176 Translation initiation factor 1A / IF-1 FY140_11130 PF06793 Uncharacterised protein family (UPF0262) FY140_11135 PF00815 Histidinol dehydrogenase FY140_11145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY140_11160 PF00669 Bacterial flagellin N-terminal helical region FY140_11160 PF00700 Bacterial flagellin C-terminal helical region FY140_11165 PF00700 Bacterial flagellin C-terminal helical region FY140_11165 PF00669 Bacterial flagellin N-terminal helical region FY140_11170 PF00700 Bacterial flagellin C-terminal helical region FY140_11170 PF00669 Bacterial flagellin N-terminal helical region FY140_11175 PF00813 FliP family FY140_11185 PF02107 Flagellar L-ring protein FY140_11195 PF02119 Flagellar P-ring protein FY140_11200 PF13144 Chaperone for flagella basal body P-ring formation FY140_11205 PF00460 Flagella basal body rod protein FY140_11205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY140_11210 PF02049 Flagellar hook-basal body complex protein FliE FY140_11215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY140_11220 PF00460 Flagella basal body rod protein FY140_11225 PF01810 LysE type translocator FY140_11235 PF18269 T3SS EscN ATPase C-terminal domain FY140_11235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY140_11240 PF00460 Flagella basal body rod protein FY140_11240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY140_11250 PF01618 MotA/TolQ/ExbB proton channel family FY140_11255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY140_11260 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY140_11265 PF14841 FliG middle domain FY140_11265 PF01706 FliG C-terminal domain FY140_11265 PF14842 FliG N-terminal domain FY140_11270 PF01312 FlhB HrpN YscU SpaS Family FY140_11280 PF00669 Bacterial flagellin N-terminal helical region FY140_11280 PF00700 Bacterial flagellin C-terminal helical region FY140_11290 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY140_11290 PF00691 OmpA family FY140_11300 PF02120 Flagellar hook-length control protein FliK FY140_11310 PF00486 Transcriptional regulatory protein, C terminal FY140_11315 PF00460 Flagella basal body rod protein FY140_11315 PF07559 Flagellar basal body protein FlaE FY140_11315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY140_11320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY140_11320 PF00460 Flagella basal body rod protein FY140_11335 PF07378 Flagellar protein FlbT FY140_11340 PF03963 Flagellar hook capping protein - N-terminal region FY140_11340 PF13860 FlgD Ig-like domain FY140_11340 PF13861 FlgD Tudor-like domain FY140_11345 PF01313 Bacterial export proteins, family 3 FY140_11350 PF00771 FHIPEP family FY140_11355 PF01311 Bacterial export proteins, family 1 FY140_11390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY140_11390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY140_11395 PF00356 Bacterial regulatory proteins, lacI family FY140_11400 PF01547 Bacterial extracellular solute-binding protein FY140_11405 PF00528 Binding-protein-dependent transport system inner membrane component FY140_11410 PF00528 Binding-protein-dependent transport system inner membrane component FY140_11415 PF00128 Alpha amylase, catalytic domain FY140_11420 PF00005 ABC transporter FY140_11420 PF03459 TOBE domain FY140_11420 PF17912 MalK OB fold domain FY140_11430 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY140_11445 PF00920 Dehydratase family FY140_11450 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY140_11455 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY140_11455 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY140_11460 PF01266 FAD dependent oxidoreductase FY140_11465 PF00120 Glutamine synthetase, catalytic domain FY140_11490 PF00463 Isocitrate lyase family FY140_11495 PF06114 IrrE N-terminal-like domain FY140_11495 PF09856 Predicted transcriptional regulator (DUF2083) FY140_11495 PF01381 Helix-turn-helix FY140_11500 PF13416 Bacterial extracellular solute-binding protein FY140_11505 PF08402 TOBE domain FY140_11505 PF00005 ABC transporter FY140_11510 PF00528 Binding-protein-dependent transport system inner membrane component FY140_11515 PF00528 Binding-protein-dependent transport system inner membrane component FY140_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_11525 PF00512 His Kinase A (phospho-acceptor) domain FY140_11525 PF13188 PAS domain FY140_11525 PF00989 PAS fold FY140_11525 PF13426 PAS domain FY140_11535 PF02541 Ppx/GppA phosphatase family FY140_11540 PF01728 FtsJ-like methyltransferase FY140_11545 PF07690 Major Facilitator Superfamily FY140_11555 PF00571 CBS domain FY140_11555 PF00478 IMP dehydrogenase / GMP reductase domain FY140_11565 PF08240 Alcohol dehydrogenase GroES-like domain FY140_11565 PF00107 Zinc-binding dehydrogenase FY140_11570 PF01738 Dienelactone hydrolase family FY140_11575 PF00994 Probable molybdopterin binding domain FY140_11580 PF08544 GHMP kinases C terminal FY140_11580 PF00288 GHMP kinases N terminal domain FY140_11590 PF00348 Polyprenyl synthetase FY140_11605 PF06965 Na+/H+ antiporter 1 FY140_11605 PF01343 Peptidase family S49 FY140_11625 PF02091 Glycyl-tRNA synthetase alpha subunit FY140_11630 PF04011 LemA family FY140_11635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY140_11645 PF05746 DALR anticodon binding domain FY140_11645 PF02092 Glycyl-tRNA synthetase beta subunit FY140_11650 PF04463 Protein of unknown function (DUF523) FY140_11655 PF00672 HAMP domain FY140_11655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_11665 PF02844 Phosphoribosylglycinamide synthetase, N domain FY140_11665 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY140_11665 PF02843 Phosphoribosylglycinamide synthetase, C domain FY140_11670 PF09371 Tex-like protein N-terminal domain FY140_11670 PF16921 Tex protein YqgF-like domain FY140_11670 PF17674 HHH domain FY140_11670 PF00575 S1 RNA binding domain FY140_11685 PF01040 UbiA prenyltransferase family FY140_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_11700 PF03466 LysR substrate binding domain FY140_11710 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY140_11715 PF04452 RNA methyltransferase FY140_11720 PF01384 Phosphate transporter family FY140_11730 PF05116 Sucrose-6F-phosphate phosphohydrolase FY140_11735 PF13439 Glycosyltransferase Family 4 FY140_11735 PF00534 Glycosyl transferases group 1 FY140_11740 PF00392 Bacterial regulatory proteins, gntR family FY140_11740 PF07729 FCD domain FY140_11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_11750 PF03466 LysR substrate binding domain FY140_11755 PF02913 FAD linked oxidases, C-terminal domain FY140_11755 PF01565 FAD binding domain FY140_11760 PF02913 FAD linked oxidases, C-terminal domain FY140_11760 PF01565 FAD binding domain FY140_11765 PF13183 4Fe-4S dicluster domain FY140_11765 PF02754 Cysteine-rich domain FY140_11775 PF17969 L,D-transpeptidase C-terminal domain FY140_11775 PF03734 L,D-transpeptidase catalytic domain FY140_11780 PF03352 Methyladenine glycosylase FY140_11790 PF03601 Conserved hypothetical protein 698 FY140_11795 PF03466 LysR substrate binding domain FY140_11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_11825 PF03129 Anticodon binding domain FY140_11825 PF13393 Histidyl-tRNA synthetase FY140_11835 PF13393 Histidyl-tRNA synthetase FY140_11840 PF01634 ATP phosphoribosyltransferase FY140_11845 PF07681 DoxX FY140_11855 PF00118 TCP-1/cpn60 chaperonin family FY140_11860 PF00166 Chaperonin 10 Kd subunit FY140_11870 PF06574 FAD synthetase FY140_11870 PF01687 Riboflavin kinase FY140_11875 PF00133 tRNA synthetases class I (I, L, M and V) FY140_11875 PF08264 Anticodon-binding domain of tRNA FY140_11885 PF14437 MafB19-like deaminase FY140_11890 PF00849 RNA pseudouridylate synthase FY140_11890 PF01479 S4 domain FY140_11900 PF01734 Patatin-like phospholipase FY140_11905 PF00999 Sodium/hydrogen exchanger family FY140_11905 PF02254 TrkA-N domain FY140_11910 PF01523 Putative modulator of DNA gyrase FY140_11915 PF00459 Inositol monophosphatase family FY140_11925 PF00534 Glycosyl transferases group 1 FY140_11925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY140_11935 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY140_11945 PF08676 MutL C terminal dimerisation domain FY140_11945 PF01119 DNA mismatch repair protein, C-terminal domain FY140_11950 PF00486 Transcriptional regulatory protein, C terminal FY140_11950 PF00072 Response regulator receiver domain FY140_11955 PF00990 Diguanylate cyclase, GGDEF domain FY140_11955 PF03707 Bacterial signalling protein N terminal repeat FY140_11955 PF00563 EAL domain FY140_11955 PF13188 PAS domain FY140_11960 PF08450 SMP-30/Gluconolactonase/LRE-like region FY140_11965 PF01081 KDPG and KHG aldolase FY140_11970 PF05035 2-keto-3-deoxy-galactonokinase FY140_11980 PF09339 IclR helix-turn-helix domain FY140_11980 PF01614 Bacterial transcriptional regulator FY140_11985 PF03472 Autoinducer binding domain FY140_11985 PF00196 Bacterial regulatory proteins, luxR family FY140_11995 PF10609 NUBPL iron-transfer P-loop NTPase FY140_12000 PF01544 CorA-like Mg2+ transporter protein FY140_12005 PF02705 K+ potassium transporter FY140_12015 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FY140_12020 PF00119 ATP synthase A chain FY140_12025 PF00137 ATP synthase subunit C FY140_12030 PF00430 ATP synthase B/B' CF(0) FY140_12035 PF00430 ATP synthase B/B' CF(0) FY140_12045 PF01351 Ribonuclease HII FY140_12060 PF02913 FAD linked oxidases, C-terminal domain FY140_12060 PF01565 FAD binding domain FY140_12065 PF01300 Telomere recombination FY140_12065 PF03481 Putative GTP-binding controlling metal-binding FY140_12075 PF00355 Rieske [2Fe-2S] domain FY140_12075 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY140_12080 PF00970 Oxidoreductase FAD-binding domain FY140_12080 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_12080 PF00175 Oxidoreductase NAD-binding domain FY140_12085 PF07886 BA14K-like protein FY140_12090 PF07886 BA14K-like protein FY140_12100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_12100 PF02770 Acyl-CoA dehydrogenase, middle domain FY140_12100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY140_12100 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY140_12115 PF05958 tRNA (Uracil-5-)-methyltransferase FY140_12120 PF01728 FtsJ-like methyltransferase FY140_12120 PF01479 S4 domain FY140_12125 PF00672 HAMP domain FY140_12125 PF02203 Tar ligand binding domain homologue FY140_12125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_12135 PF01037 Lrp/AsnC ligand binding domain FY140_12160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY140_12160 PF02779 Transketolase, pyrimidine binding domain FY140_12160 PF02780 Transketolase, C-terminal domain FY140_12165 PF02678 Pirin FY140_12165 PF05726 Pirin C-terminal cupin domain FY140_12170 PF02609 Exonuclease VII small subunit FY140_12175 PF00850 Histone deacetylase domain FY140_12180 PF02632 BioY family FY140_12185 PF02361 Cobalt transport protein FY140_12190 PF00005 ABC transporter FY140_12195 PF06224 Winged helix DNA-binding domain FY140_12205 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY140_12205 PF00925 GTP cyclohydrolase II FY140_12210 PF01264 Chorismate synthase FY140_12225 PF00300 Histidine phosphatase superfamily (branch 1) FY140_12235 PF00684 DnaJ central domain FY140_12235 PF00226 DnaJ domain FY140_12235 PF01556 DnaJ C terminal domain FY140_12245 PF01243 Pyridoxamine 5'-phosphate oxidase FY140_12245 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY140_12270 PF13419 Haloacid dehalogenase-like hydrolase FY140_12280 PF01523 Putative modulator of DNA gyrase FY140_12290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY140_12290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY140_12295 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY140_12300 PF01040 UbiA prenyltransferase family FY140_12305 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY140_12310 PF00510 Cytochrome c oxidase subunit III FY140_12320 PF02104 SURF1 family FY140_12325 PF02401 LytB protein FY140_12330 PF01636 Phosphotransferase enzyme family FY140_12335 PF00075 RNase H FY140_12345 PF00462 Glutaredoxin FY140_12345 PF08534 Redoxin FY140_12355 PF02622 Uncharacterized ACR, COG1678 FY140_12365 PF10005 zinc-ribbon domain FY140_12365 PF15887 Putative zinc-binding metallo-peptidase FY140_12370 PF00990 Diguanylate cyclase, GGDEF domain FY140_12370 PF03707 Bacterial signalling protein N terminal repeat FY140_12370 PF13188 PAS domain FY140_12370 PF00563 EAL domain FY140_12375 PF13302 Acetyltransferase (GNAT) domain FY140_12380 PF00675 Insulinase (Peptidase family M16) FY140_12380 PF05193 Peptidase M16 inactive domain FY140_12385 PF00291 Pyridoxal-phosphate dependent enzyme FY140_12385 PF14821 Threonine synthase N terminus FY140_12395 PF13419 Haloacid dehalogenase-like hydrolase FY140_12400 PF07729 FCD domain FY140_12400 PF00392 Bacterial regulatory proteins, gntR family FY140_12415 PF01555 DNA methylase FY140_12415 PF18755 Restriction Enzyme Adenine Methylase Associated FY140_12420 PF12146 Serine aminopeptidase, S33 FY140_12430 PF00730 HhH-GPD superfamily base excision DNA repair protein FY140_12430 PF14815 NUDIX domain FY140_12445 PF13462 Thioredoxin FY140_12450 PF02463 RecF/RecN/SMC N terminal domain FY140_12460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_12465 PF02896 PEP-utilising enzyme, TIM barrel domain FY140_12465 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY140_12465 PF00391 PEP-utilising enzyme, mobile domain FY140_12480 PF00375 Sodium:dicarboxylate symporter family FY140_12510 PF06039 Malate:quinone oxidoreductase (Mqo) FY140_12525 PF00009 Elongation factor Tu GTP binding domain FY140_12530 PF01507 Phosphoadenosine phosphosulfate reductase family FY140_12535 PF01507 Phosphoadenosine phosphosulfate reductase family FY140_12540 PF02082 Transcriptional regulator FY140_12550 PF00528 Binding-protein-dependent transport system inner membrane component FY140_12555 PF00528 Binding-protein-dependent transport system inner membrane component FY140_12560 PF12857 TOBE-like domain FY140_12560 PF00005 ABC transporter FY140_12575 PF00698 Acyl transferase domain FY140_12575 PF14765 Polyketide synthase dehydratase FY140_12575 PF00550 Phosphopantetheine attachment site FY140_12575 PF16197 Ketoacyl-synthetase C-terminal extension FY140_12575 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_12575 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_12575 PF08240 Alcohol dehydrogenase GroES-like domain FY140_12575 PF00107 Zinc-binding dehydrogenase FY140_12575 PF08659 KR domain FY140_12580 PF00563 EAL domain FY140_12580 PF01590 GAF domain FY140_12580 PF00990 Diguanylate cyclase, GGDEF domain FY140_12580 PF00989 PAS fold FY140_12590 PF00440 Bacterial regulatory proteins, tetR family FY140_12590 PF13977 BetI-type transcriptional repressor, C-terminal FY140_12595 PF00171 Aldehyde dehydrogenase family FY140_12600 PF05199 GMC oxidoreductase FY140_12600 PF00732 GMC oxidoreductase FY140_12615 PF00654 Voltage gated chloride channel FY140_12645 PF07690 Major Facilitator Superfamily FY140_12665 PF04679 ATP dependent DNA ligase C terminal region FY140_12665 PF01068 ATP dependent DNA ligase domain FY140_12665 PF04675 DNA ligase N terminus FY140_12675 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY140_12680 PF00403 Heavy-metal-associated domain FY140_12690 PF17969 L,D-transpeptidase C-terminal domain FY140_12690 PF03734 L,D-transpeptidase catalytic domain FY140_12695 PF01047 MarR family FY140_12700 PF02566 OsmC-like protein FY140_12715 PF12848 ABC transporter FY140_12715 PF00005 ABC transporter FY140_12745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_12745 PF03466 LysR substrate binding domain FY140_12750 PF00106 short chain dehydrogenase FY140_12760 PF05872 Bacterial protein of unknown function (DUF853) FY140_12770 PF01638 HxlR-like helix-turn-helix FY140_12780 PF12833 Helix-turn-helix domain FY140_12790 PF00248 Aldo/keto reductase family FY140_12795 PF01062 Bestrophin, RFP-TM, chloride channel FY140_12800 PF13280 WYL domain FY140_12800 PF08279 HTH domain FY140_12815 PF01063 Amino-transferase class IV FY140_12820 PF00672 HAMP domain FY140_12820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_12825 PF03466 LysR substrate binding domain FY140_12825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_12840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY140_12840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY140_12855 PF01810 LysE type translocator FY140_12860 PF01322 Cytochrome C' FY140_12865 PF00034 Cytochrome c FY140_12895 PF00376 MerR family regulatory protein FY140_12895 PF09278 MerR, DNA binding FY140_12905 PF02583 Metal-sensitive transcriptional repressor FY140_12920 PF00571 CBS domain FY140_12920 PF00005 ABC transporter FY140_12925 PF00528 Binding-protein-dependent transport system inner membrane component FY140_12940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY140_12940 PF00326 Prolyl oligopeptidase family FY140_12950 PF00701 Dihydrodipicolinate synthetase family FY140_12960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY140_12960 PF02805 Metal binding domain of Ada FY140_12960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY140_12960 PF12833 Helix-turn-helix domain FY140_12965 PF01594 AI-2E family transporter FY140_12970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_12990 PF03006 Haemolysin-III related FY140_13005 PF01641 SelR domain FY140_13010 PF00361 Proton-conducting membrane transporter FY140_13010 PF13244 Domain of unknown function (DUF4040) FY140_13010 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY140_13015 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY140_13020 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY140_13025 PF00361 Proton-conducting membrane transporter FY140_13030 PF01899 Na+/H+ ion antiporter subunit FY140_13035 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY140_13040 PF03334 Na+/H+ antiporter subunit FY140_13045 PF05443 ROS/MUCR transcriptional regulator protein FY140_13060 PF02657 Fe-S metabolism associated domain FY140_13065 PF17264 Family of unknown function (DUF5330) FY140_13070 PF00512 His Kinase A (phospho-acceptor) domain FY140_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_13105 PF07687 Peptidase dimerisation domain FY140_13105 PF01546 Peptidase family M20/M25/M40 FY140_13110 PF01810 LysE type translocator FY140_13115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_13115 PF03466 LysR substrate binding domain FY140_13120 PF00905 Penicillin binding protein transpeptidase domain FY140_13120 PF00912 Transglycosylase FY140_13125 PF03692 Putative zinc- or iron-chelating domain FY140_13130 PF00905 Penicillin binding protein transpeptidase domain FY140_13135 PF00403 Heavy-metal-associated domain FY140_13140 PF00376 MerR family regulatory protein FY140_13140 PF09278 MerR, DNA binding FY140_13155 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FY140_13175 PF07690 Major Facilitator Superfamily FY140_13185 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY140_13200 PF13404 AsnC-type helix-turn-helix domain FY140_13200 PF01037 Lrp/AsnC ligand binding domain FY140_13240 PF04860 Phage portal protein FY140_13330 PF00072 Response regulator receiver domain FY140_13330 PF00486 Transcriptional regulatory protein, C terminal FY140_13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_13350 PF03100 CcmE FY140_13355 PF01578 Cytochrome C assembly protein FY140_13355 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY140_13360 PF03918 Cytochrome C biogenesis protein FY140_13365 PF13180 PDZ domain FY140_13370 PF00072 Response regulator receiver domain FY140_13370 PF00486 Transcriptional regulatory protein, C terminal FY140_13375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_13375 PF00512 His Kinase A (phospho-acceptor) domain FY140_13375 PF00672 HAMP domain FY140_13380 PF04134 Protein of unknown function, DUF393 FY140_13395 PF03710 Glutamate-ammonia ligase adenylyltransferase FY140_13395 PF08335 GlnD PII-uridylyltransferase FY140_13400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_13400 PF00512 His Kinase A (phospho-acceptor) domain FY140_13400 PF00989 PAS fold FY140_13410 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY140_13410 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY140_13410 PF01433 Peptidase family M1 domain FY140_13415 PF00892 EamA-like transporter family FY140_13430 PF00012 Hsp70 protein FY140_13435 PF00990 Diguanylate cyclase, GGDEF domain FY140_13455 PF03796 DnaB-like helicase C terminal domain FY140_13485 PF00107 Zinc-binding dehydrogenase FY140_13485 PF08240 Alcohol dehydrogenase GroES-like domain FY140_13490 PF01638 HxlR-like helix-turn-helix FY140_13495 PF02673 Bacitracin resistance protein BacA FY140_13500 PF00571 CBS domain FY140_13500 PF03448 MgtE intracellular N domain FY140_13500 PF01769 Divalent cation transporter FY140_13505 PF07690 Major Facilitator Superfamily FY140_13510 PF00781 Diacylglycerol kinase catalytic domain FY140_13515 PF00202 Aminotransferase class-III FY140_13530 PF09957 Bacterial antitoxin of type II TA system, VapB FY140_13535 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY140_13535 PF01048 Phosphorylase superfamily FY140_13560 PF00155 Aminotransferase class I and II FY140_13570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_13570 PF14759 Reductase C-terminal FY140_13575 PF03328 HpcH/HpaI aldolase/citrate lyase family FY140_13735 PF02530 Porin subfamily FY140_13740 PF02530 Porin subfamily FY140_13745 PF01464 Transglycosylase SLT domain FY140_13745 PF14718 Soluble lytic murein transglycosylase L domain FY140_13750 PF00701 Dihydrodipicolinate synthetase family FY140_13755 PF01668 SmpB protein FY140_13760 PF00672 HAMP domain FY140_13760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_13770 PF01192 RNA polymerase Rpb6 FY140_13775 PF13291 ACT domain FY140_13775 PF04607 Region found in RelA / SpoT proteins FY140_13775 PF02824 TGS domain FY140_13790 PF01648 4'-phosphopantetheinyl transferase superfamily FY140_13795 PF10502 Signal peptidase, peptidase S26 FY140_13800 PF00035 Double-stranded RNA binding motif FY140_13800 PF14622 Ribonuclease-III-like FY140_13805 PF07650 KH domain FY140_13805 PF01926 50S ribosome-binding GTPase FY140_13815 PF00072 Response regulator receiver domain FY140_13820 PF02565 Recombination protein O C terminal FY140_13820 PF11967 Recombination protein O N terminal FY140_13825 PF07690 Major Facilitator Superfamily FY140_13830 PF05958 tRNA (Uracil-5-)-methyltransferase FY140_13840 PF01966 HD domain FY140_13850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_13865 PF00005 ABC transporter FY140_13870 PF00528 Binding-protein-dependent transport system inner membrane component FY140_13875 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY140_13880 PF00924 Mechanosensitive ion channel FY140_13880 PF05552 Conserved TM helix FY140_13890 PF01966 HD domain FY140_13895 PF01571 Aminomethyltransferase folate-binding domain FY140_13915 PF00293 NUDIX domain FY140_13920 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY140_13930 PF00990 Diguanylate cyclase, GGDEF domain FY140_13930 PF00072 Response regulator receiver domain FY140_13935 PF01066 CDP-alcohol phosphatidyltransferase FY140_13940 PF02666 Phosphatidylserine decarboxylase FY140_13945 PF00664 ABC transporter transmembrane region FY140_13945 PF00005 ABC transporter FY140_13955 PF03641 Possible lysine decarboxylase FY140_13960 PF00892 EamA-like transporter family FY140_13965 PF00561 alpha/beta hydrolase fold FY140_13985 PF04480 Protein of unknown function (DUF559) FY140_13990 PF01406 tRNA synthetases class I (C) catalytic domain FY140_13990 PF09190 DALR domain FY140_13995 PF00106 short chain dehydrogenase FY140_14000 PF00156 Phosphoribosyl transferase domain FY140_14000 PF13537 Glutamine amidotransferase domain FY140_14005 PF02674 Colicin V production protein FY140_14010 PF06745 KaiC FY140_14010 PF18073 Rubredoxin metal binding domain FY140_14025 PF00842 Alanine racemase, C-terminal domain FY140_14025 PF01168 Alanine racemase, N-terminal domain FY140_14030 PF12833 Helix-turn-helix domain FY140_14030 PF12852 Cupin FY140_14035 PF03591 AzlC protein FY140_14045 PF00664 ABC transporter transmembrane region FY140_14045 PF00005 ABC transporter FY140_14050 PF03796 DnaB-like helicase C terminal domain FY140_14050 PF00772 DnaB-like helicase N terminal domain FY140_14065 PF13533 Biotin-lipoyl like FY140_14070 PF03948 Ribosomal protein L9, C-terminal domain FY140_14070 PF01281 Ribosomal protein L9, N-terminal domain FY140_14080 PF01084 Ribosomal protein S18 FY140_14085 PF01250 Ribosomal protein S6 FY140_14090 PF00248 Aldo/keto reductase family FY140_14095 PF00698 Acyl transferase domain FY140_14105 PF00550 Phosphopantetheine attachment site FY140_14110 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_14110 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_14120 PF02618 YceG-like family FY140_14125 PF03755 YicC-like family, N-terminal region FY140_14125 PF08340 Domain of unknown function (DUF1732) FY140_14130 PF00625 Guanylate kinase FY140_14135 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FY140_14140 PF01850 PIN domain FY140_14150 PF00398 Ribosomal RNA adenine dimethylase FY140_14155 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY140_14165 PF03968 OstA-like protein FY140_14165 PF04453 LPS transport system D FY140_14180 PF00883 Cytosol aminopeptidase family, catalytic domain FY140_14180 PF02789 Cytosol aminopeptidase family, N-terminal domain FY140_14190 PF03707 Bacterial signalling protein N terminal repeat FY140_14190 PF00990 Diguanylate cyclase, GGDEF domain FY140_14190 PF00563 EAL domain FY140_14195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_14205 PF00990 Diguanylate cyclase, GGDEF domain FY140_14205 PF00563 EAL domain FY140_14205 PF03707 Bacterial signalling protein N terminal repeat FY140_14210 PF00989 PAS fold FY140_14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_14210 PF00512 His Kinase A (phospho-acceptor) domain FY140_14215 PF00196 Bacterial regulatory proteins, luxR family FY140_14215 PF00072 Response regulator receiver domain FY140_14225 PF00005 ABC transporter FY140_14225 PF12848 ABC transporter FY140_14230 PF00990 Diguanylate cyclase, GGDEF domain FY140_14230 PF17158 Membrane-associated sensor, integral membrane domain FY140_14235 PF13417 Glutathione S-transferase, N-terminal domain FY140_14240 PF00334 Nucleoside diphosphate kinase FY140_14260 PF02391 MoaE protein FY140_14270 PF01066 CDP-alcohol phosphatidyltransferase FY140_14275 PF01541 GIY-YIG catalytic domain FY140_14275 PF02151 UvrB/uvrC motif FY140_14275 PF08459 UvrC Helix-hairpin-helix N-terminal FY140_14285 PF13505 Outer membrane protein beta-barrel domain FY140_14290 PF00043 Glutathione S-transferase, C-terminal domain FY140_14290 PF13417 Glutathione S-transferase, N-terminal domain FY140_14295 PF00445 Ribonuclease T2 family FY140_14305 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY140_14310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY140_14310 PF00384 Molybdopterin oxidoreductase FY140_14310 PF01568 Molydopterin dinucleotide binding domain FY140_14315 PF00293 NUDIX domain FY140_14335 PF00551 Formyl transferase FY140_14340 PF00586 AIR synthase related protein, N-terminal domain FY140_14340 PF02769 AIR synthase related protein, C-terminal domain FY140_14350 PF01594 AI-2E family transporter FY140_14360 PF02503 Polyphosphate kinase middle domain FY140_14360 PF13090 Polyphosphate kinase C-terminal domain 2 FY140_14360 PF17941 Polyphosphate kinase C-terminal domain 1 FY140_14360 PF13089 Polyphosphate kinase N-terminal domain FY140_14365 PF02541 Ppx/GppA phosphatase family FY140_14370 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_14390 PF00211 Adenylate and Guanylate cyclase catalytic domain FY140_14400 PF01612 3'-5' exonuclease FY140_14400 PF00570 HRDC domain FY140_14405 PF07690 Major Facilitator Superfamily FY140_14410 PF02938 GAD domain FY140_14410 PF00152 tRNA synthetases class II (D, K and N) FY140_14410 PF01336 OB-fold nucleic acid binding domain FY140_14415 PF06123 Inner membrane protein CreD FY140_14420 PF00672 HAMP domain FY140_14420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_14425 PF01740 STAS domain FY140_14425 PF00916 Sulfate permease family FY140_14435 PF03989 DNA gyrase C-terminal domain, beta-propeller FY140_14435 PF00521 DNA gyrase/topoisomerase IV, subunit A FY140_14445 PF04376 Arginine-tRNA-protein transferase, N terminus FY140_14445 PF04377 Arginine-tRNA-protein transferase, C terminus FY140_14455 PF00490 Delta-aminolevulinic acid dehydratase FY140_14475 PF00464 Serine hydroxymethyltransferase FY140_14480 PF03477 ATP cone domain FY140_14485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY140_14485 PF01872 RibD C-terminal domain FY140_14490 PF00677 Lumazine binding domain FY140_14495 PF01810 LysE type translocator FY140_14500 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY140_14505 PF01029 NusB family FY140_14510 PF07690 Major Facilitator Superfamily FY140_14515 PF03030 Inorganic H+ pyrophosphatase FY140_14535 PF02504 Fatty acid synthesis protein FY140_14540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY140_14540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY140_14545 PF00216 Bacterial DNA-binding protein FY140_14550 PF13411 MerR HTH family regulatory protein FY140_14565 PF00403 Heavy-metal-associated domain FY140_14570 PF00970 Oxidoreductase FAD-binding domain FY140_14570 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_14570 PF00175 Oxidoreductase NAD-binding domain FY140_14575 PF09278 MerR, DNA binding FY140_14575 PF00376 MerR family regulatory protein FY140_14580 PF00528 Binding-protein-dependent transport system inner membrane component FY140_14585 PF00528 Binding-protein-dependent transport system inner membrane component FY140_14585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_14590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_14590 PF00005 ABC transporter FY140_14595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_14595 PF00005 ABC transporter FY140_14600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_14610 PF02386 Cation transport protein FY140_14615 PF00585 C-terminal regulatory domain of Threonine dehydratase FY140_14615 PF00291 Pyridoxal-phosphate dependent enzyme FY140_14630 PF02525 Flavodoxin-like fold FY140_14635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_14635 PF03466 LysR substrate binding domain FY140_14645 PF02872 5'-nucleotidase, C-terminal domain FY140_14645 PF00149 Calcineurin-like phosphoesterase FY140_14665 PF00581 Rhodanese-like domain FY140_14670 PF01411 tRNA synthetases class II (A) FY140_14670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY140_14670 PF02272 DHHA1 domain FY140_14675 PF00571 CBS domain FY140_14675 PF00291 Pyridoxal-phosphate dependent enzyme FY140_14680 PF03441 FAD binding domain of DNA photolyase FY140_14680 PF00875 DNA photolyase FY140_14690 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY140_14690 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY140_14720 PF06055 Exopolysaccharide synthesis, ExoD FY140_14725 PF09335 SNARE associated Golgi protein FY140_14765 PF02397 Bacterial sugar transferase FY140_14770 PF00534 Glycosyl transferases group 1 FY140_14795 PF02628 Cytochrome oxidase assembly protein FY140_14800 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY140_14805 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY140_14810 PF00491 Arginase family FY140_14815 PF13744 Helix-turn-helix domain FY140_14825 PF00380 Ribosomal protein S9/S16 FY140_14830 PF00572 Ribosomal protein L13 FY140_14840 PF13380 CoA binding domain FY140_14845 PF01053 Cys/Met metabolism PLP-dependent enzyme FY140_14860 PF00067 Cytochrome P450 FY140_14865 PF17151 Periplasmic sensor domain FY140_14865 PF00990 Diguanylate cyclase, GGDEF domain FY140_14870 PF00574 Clp protease FY140_14875 PF07724 AAA domain (Cdc48 subfamily) FY140_14875 PF10431 C-terminal, D2-small domain, of ClpB protein FY140_14875 PF06689 ClpX C4-type zinc finger FY140_14880 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY140_14880 PF05362 Lon protease (S16) C-terminal proteolytic domain FY140_14880 PF00004 ATPase family associated with various cellular activities (AAA) FY140_14885 PF00216 Bacterial DNA-binding protein FY140_14890 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY140_14910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY140_14915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY140_14920 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY140_14930 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY140_14945 PF10531 SLBB domain FY140_14945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY140_14945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY140_14950 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY140_14950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY140_14950 PF00384 Molybdopterin oxidoreductase FY140_14955 PF00146 NADH dehydrogenase FY140_14960 PF12838 4Fe-4S dicluster domain FY140_14965 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY140_14970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY140_14975 PF00361 Proton-conducting membrane transporter FY140_14975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY140_14980 PF00361 Proton-conducting membrane transporter FY140_14980 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY140_14985 PF00361 Proton-conducting membrane transporter FY140_14990 PF02237 Biotin protein ligase C terminal domain FY140_14990 PF03099 Biotin/lipoate A/B protein ligase family FY140_14990 PF08279 HTH domain FY140_14995 PF12706 Beta-lactamase superfamily domain FY140_14995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY140_14995 PF17770 Ribonuclease J C-terminal domain FY140_15005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY140_15005 PF03129 Anticodon binding domain FY140_15010 PF12704 MacB-like periplasmic core domain FY140_15010 PF02687 FtsX-like permease family FY140_15015 PF00005 ABC transporter FY140_15020 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY140_15020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY140_15020 PF14579 Helix-hairpin-helix motif FY140_15020 PF02811 PHP domain FY140_15030 PF00817 impB/mucB/samB family FY140_15030 PF11799 impB/mucB/samB family C-terminal domain FY140_15040 PF00072 Response regulator receiver domain FY140_15045 PF00990 Diguanylate cyclase, GGDEF domain FY140_15045 PF00072 Response regulator receiver domain FY140_15050 PF00471 Ribosomal protein L33 FY140_15055 PF07690 Major Facilitator Superfamily FY140_15070 PF00575 S1 RNA binding domain FY140_15070 PF17876 Cold shock domain FY140_15070 PF08461 Ribonuclease R winged-helix domain FY140_15070 PF08206 Ribonuclease B OB domain FY140_15070 PF00773 RNB domain FY140_15075 PF01751 Toprim domain FY140_15075 PF01131 DNA topoisomerase FY140_15075 PF01396 Topoisomerase DNA binding C4 zinc finger FY140_15075 PF13368 Topoisomerase C-terminal repeat FY140_15085 PF02481 DNA recombination-mediator protein A FY140_15085 PF17782 DprA winged helix domain FY140_15090 PF02660 Glycerol-3-phosphate acyltransferase FY140_15095 PF01979 Amidohydrolase family FY140_15100 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY140_15100 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY140_15110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY140_15110 PF18158 Adaptive response protein AidB N-terminal domain FY140_15110 PF02770 Acyl-CoA dehydrogenase, middle domain FY140_15115 PF00583 Acetyltransferase (GNAT) family FY140_15140 PF03652 Holliday junction resolvase FY140_15145 PF08274 PhnA Zinc-Ribbon FY140_15145 PF03831 PhnA domain FY140_15155 PF02686 Glu-tRNAGln amidotransferase C subunit FY140_15160 PF01425 Amidase FY140_15165 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY140_15180 PF02934 GatB/GatE catalytic domain FY140_15180 PF02637 GatB domain FY140_15190 PF00583 Acetyltransferase (GNAT) family FY140_15210 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY140_15215 PF00289 Biotin carboxylase, N-terminal domain FY140_15215 PF02785 Biotin carboxylase C-terminal domain FY140_15215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_15220 PF00364 Biotin-requiring enzyme FY140_15225 PF01220 Dehydroquinase class II FY140_15230 PF06965 Na+/H+ antiporter 1 FY140_15230 PF13462 Thioredoxin FY140_15235 PF00155 Aminotransferase class I and II FY140_15260 PF12111 Polyribonucleotide phosphorylase C terminal FY140_15260 PF10150 Ribonuclease E/G family FY140_15260 PF00575 S1 RNA binding domain FY140_15265 PF01520 N-acetylmuramoyl-L-alanine amidase FY140_15270 PF17092 Penicillin-binding protein OB-like domain FY140_15270 PF00905 Penicillin binding protein transpeptidase domain FY140_15270 PF00912 Transglycosylase FY140_15290 PF01513 ATP-NAD kinase FY140_15295 PF02567 Phenazine biosynthesis-like protein FY140_15310 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_15320 PF00809 Pterin binding enzyme FY140_15325 PF02152 Dihydroneopterin aldolase FY140_15330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY140_15340 PF05128 Domain of unknown function (DUF697) FY140_15345 PF04317 YcjX-like family, DUF463 FY140_15355 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY140_15370 PF00072 Response regulator receiver domain FY140_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_15370 PF13188 PAS domain FY140_15370 PF08448 PAS fold FY140_15370 PF00512 His Kinase A (phospho-acceptor) domain FY140_15375 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY140_15380 PF02861 Clp amino terminal domain, pathogenicity island component FY140_15380 PF10431 C-terminal, D2-small domain, of ClpB protein FY140_15380 PF07724 AAA domain (Cdc48 subfamily) FY140_15380 PF00004 ATPase family associated with various cellular activities (AAA) FY140_15380 PF17871 AAA lid domain FY140_15395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_15395 PF03466 LysR substrate binding domain FY140_15405 PF01230 HIT domain FY140_15430 PF00318 Ribosomal protein S2 FY140_15435 PF00889 Elongation factor TS FY140_15440 PF00696 Amino acid kinase family FY140_15445 PF01765 Ribosome recycling factor FY140_15450 PF01255 Putative undecaprenyl diphosphate synthase FY140_15460 PF17820 PDZ domain FY140_15460 PF02163 Peptidase family M50 FY140_15465 PF01103 Surface antigen FY140_15465 PF07244 Surface antigen variable number repeat FY140_15470 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_15470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY140_15475 PF07977 FabA-like domain FY140_15480 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_15480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY140_15485 PF17930 LpxI N-terminal domain FY140_15485 PF06230 LpxI C-terminal domain FY140_15490 PF02684 Lipid-A-disaccharide synthetase FY140_15495 PF07729 FCD domain FY140_15495 PF00392 Bacterial regulatory proteins, gntR family FY140_15500 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_15505 PF00528 Binding-protein-dependent transport system inner membrane component FY140_15510 PF00528 Binding-protein-dependent transport system inner membrane component FY140_15515 PF00005 ABC transporter FY140_15520 PF00285 Citrate synthase, C-terminal domain FY140_15535 PF01726 LexA DNA binding domain FY140_15535 PF00717 Peptidase S24-like FY140_15545 PF00793 DAHP synthetase I family FY140_15550 PF00113 Enolase, C-terminal TIM barrel domain FY140_15550 PF03952 Enolase, N-terminal domain FY140_15560 PF00676 Dehydrogenase E1 component FY140_15565 PF00364 Biotin-requiring enzyme FY140_15565 PF02779 Transketolase, pyrimidine binding domain FY140_15565 PF02780 Transketolase, C-terminal domain FY140_15570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY140_15570 PF02817 e3 binding domain FY140_15570 PF00364 Biotin-requiring enzyme FY140_15580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_15580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY140_15590 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY140_15590 PF04055 Radical SAM superfamily FY140_15595 PF00892 EamA-like transporter family FY140_15610 PF03364 Polyketide cyclase / dehydrase and lipid transport FY140_15615 PF02464 Competence-damaged protein FY140_15620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY140_15620 PF02542 YgbB family FY140_15625 PF01207 Dihydrouridine synthase (Dus) FY140_15630 PF00989 PAS fold FY140_15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_15630 PF00512 His Kinase A (phospho-acceptor) domain FY140_15635 PF00158 Sigma-54 interaction domain FY140_15635 PF00072 Response regulator receiver domain FY140_15635 PF02954 Bacterial regulatory protein, Fis family FY140_15640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_15640 PF00672 HAMP domain FY140_15640 PF00989 PAS fold FY140_15640 PF00512 His Kinase A (phospho-acceptor) domain FY140_15645 PF00072 Response regulator receiver domain FY140_15645 PF02954 Bacterial regulatory protein, Fis family FY140_15645 PF00158 Sigma-54 interaction domain FY140_15650 PF02254 TrkA-N domain FY140_15650 PF02080 TrkA-C domain FY140_15655 PF17209 Hfq protein FY140_15660 PF01926 50S ribosome-binding GTPase FY140_15660 PF13167 GTP-binding GTPase N-terminal FY140_15660 PF16360 GTP-binding GTPase Middle Region FY140_15665 PF03819 MazG nucleotide pyrophosphohydrolase domain FY140_15675 PF14824 Sirohaem biosynthesis protein central FY140_15675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_15675 PF10414 Sirohaem synthase dimerisation region FY140_15695 PF00970 Oxidoreductase FAD-binding domain FY140_15695 PF00175 Oxidoreductase NAD-binding domain FY140_15710 PF02347 Glycine cleavage system P-protein FY140_15715 PF01597 Glycine cleavage H-protein FY140_15720 PF01571 Aminomethyltransferase folate-binding domain FY140_15720 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY140_15745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY140_15750 PF01479 S4 domain FY140_15750 PF00849 RNA pseudouridylate synthase FY140_15755 PF13419 Haloacid dehalogenase-like hydrolase FY140_15770 PF01042 Endoribonuclease L-PSP FY140_15775 PF00756 Putative esterase FY140_15785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY140_15800 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY140_15800 PF00578 AhpC/TSA family FY140_15810 PF02798 Glutathione S-transferase, N-terminal domain FY140_15810 PF00043 Glutathione S-transferase, C-terminal domain FY140_15815 PF00583 Acetyltransferase (GNAT) family FY140_15825 PF13458 Periplasmic binding protein FY140_15830 PF02653 Branched-chain amino acid transport system / permease component FY140_15835 PF02653 Branched-chain amino acid transport system / permease component FY140_15840 PF00005 ABC transporter FY140_15840 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY140_15845 PF00005 ABC transporter FY140_15850 PF00155 Aminotransferase class I and II FY140_15855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_15855 PF03466 LysR substrate binding domain FY140_15860 PF05378 Hydantoinase/oxoprolinase N-terminal region FY140_15860 PF01968 Hydantoinase/oxoprolinase FY140_15875 PF03328 HpcH/HpaI aldolase/citrate lyase family FY140_15895 PF08281 Sigma-70, region 4 FY140_15895 PF04542 Sigma-70 region 2 FY140_15920 PF03358 NADPH-dependent FMN reductase FY140_15925 PF03960 ArsC family FY140_15935 PF00501 AMP-binding enzyme FY140_15935 PF01370 NAD dependent epimerase/dehydratase family FY140_15935 PF00550 Phosphopantetheine attachment site FY140_15950 PF00550 Phosphopantetheine attachment site FY140_15950 PF00698 Acyl transferase domain FY140_15950 PF08659 KR domain FY140_15950 PF08240 Alcohol dehydrogenase GroES-like domain FY140_15950 PF16197 Ketoacyl-synthetase C-terminal extension FY140_15950 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_15950 PF14765 Polyketide synthase dehydratase FY140_15950 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_15955 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_15955 PF16197 Ketoacyl-synthetase C-terminal extension FY140_15955 PF08240 Alcohol dehydrogenase GroES-like domain FY140_15955 PF00698 Acyl transferase domain FY140_15955 PF08659 KR domain FY140_15955 PF00550 Phosphopantetheine attachment site FY140_15955 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_15955 PF14765 Polyketide synthase dehydratase FY140_15965 PF00795 Carbon-nitrogen hydrolase FY140_15970 PF01648 4'-phosphopantetheinyl transferase superfamily FY140_15970 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY140_15975 PF00873 AcrB/AcrD/AcrF family FY140_15980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_15990 PF00654 Voltage gated chloride channel FY140_15995 PF12706 Beta-lactamase superfamily domain FY140_15995 PF03099 Biotin/lipoate A/B protein ligase family FY140_16000 PF01026 TatD related DNase FY140_16005 PF09334 tRNA synthetases class I (M) FY140_16005 PF08264 Anticodon-binding domain of tRNA FY140_16010 PF09115 DNA polymerase III, delta subunit, C terminal FY140_16015 PF02223 Thymidylate kinase FY140_16020 PF00768 D-alanyl-D-alanine carboxypeptidase FY140_16020 PF07943 Penicillin-binding protein 5, C-terminal domain FY140_16025 PF05036 Sporulation related domain FY140_16025 PF03330 Lytic transglycolase FY140_16070 PF00521 DNA gyrase/topoisomerase IV, subunit A FY140_16070 PF03989 DNA gyrase C-terminal domain, beta-propeller FY140_16075 PF01914 MarC family integral membrane protein FY140_16080 PF00571 CBS domain FY140_16080 PF01743 Poly A polymerase head domain FY140_16085 PF00436 Single-strand binding protein family FY140_16090 PF17755 UvrA DNA-binding domain FY140_16090 PF17760 UvrA interaction domain FY140_16100 PF01207 Dihydrouridine synthase (Dus) FY140_16105 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY140_16110 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_16120 PF00950 ABC 3 transport family FY140_16125 PF00005 ABC transporter FY140_16130 PF01297 Zinc-uptake complex component A periplasmic FY140_16135 PF00356 Bacterial regulatory proteins, lacI family FY140_16145 PF00248 Aldo/keto reductase family FY140_16155 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY140_16155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY140_16160 PF03597 Cytochrome oxidase maturation protein cbb3-type FY140_16170 PF05751 FixH FY140_16175 PF13746 4Fe-4S dicluster domain FY140_16175 PF12801 4Fe-4S binding domain FY140_16175 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY140_16190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY140_16190 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY140_16205 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY140_16210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY140_16230 PF00376 MerR family regulatory protein FY140_16230 PF09278 MerR, DNA binding FY140_16235 PF00571 CBS domain FY140_16235 PF01769 Divalent cation transporter FY140_16235 PF03448 MgtE intracellular N domain FY140_16240 PF00384 Molybdopterin oxidoreductase FY140_16250 PF01327 Polypeptide deformylase FY140_16260 PF00512 His Kinase A (phospho-acceptor) domain FY140_16260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_16260 PF00989 PAS fold FY140_16270 PF03099 Biotin/lipoate A/B protein ligase family FY140_16275 PF00107 Zinc-binding dehydrogenase FY140_16275 PF08240 Alcohol dehydrogenase GroES-like domain FY140_16300 PF02355 Protein export membrane protein FY140_16300 PF07549 SecD/SecF GG Motif FY140_16305 PF02699 Preprotein translocase subunit FY140_16315 PF08240 Alcohol dehydrogenase GroES-like domain FY140_16315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY140_16320 PF00440 Bacterial regulatory proteins, tetR family FY140_16325 PF00067 Cytochrome P450 FY140_16335 PF06426 Serine acetyltransferase, N-terminal FY140_16335 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_16340 PF00561 alpha/beta hydrolase fold FY140_16350 PF01494 FAD binding domain FY140_16355 PF01053 Cys/Met metabolism PLP-dependent enzyme FY140_16360 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_16365 PF00528 Binding-protein-dependent transport system inner membrane component FY140_16370 PF00528 Binding-protein-dependent transport system inner membrane component FY140_16375 PF00005 ABC transporter FY140_16390 PF01368 DHH family FY140_16390 PF17768 RecJ OB domain FY140_16390 PF02272 DHHA1 domain FY140_16400 PF00742 Homoserine dehydrogenase FY140_16400 PF01842 ACT domain FY140_16400 PF03447 Homoserine dehydrogenase, NAD binding domain FY140_16405 PF00155 Aminotransferase class I and II FY140_16410 PF01156 Inosine-uridine preferring nucleoside hydrolase FY140_16415 PF01925 Sulfite exporter TauE/SafE FY140_16430 PF08240 Alcohol dehydrogenase GroES-like domain FY140_16430 PF00107 Zinc-binding dehydrogenase FY140_16435 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_16435 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_16440 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_16440 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_16445 PF07977 FabA-like domain FY140_16450 PF00550 Phosphopantetheine attachment site FY140_16455 PF04055 Radical SAM superfamily FY140_16460 PF13545 Crp-like helix-turn-helix domain FY140_16460 PF00027 Cyclic nucleotide-binding domain FY140_16475 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY140_16480 PF03749 Sugar fermentation stimulation protein RE domain FY140_16480 PF17746 SfsA N-terminal OB domain FY140_16485 PF00557 Metallopeptidase family M24 FY140_16490 PF04002 RadC-like JAB domain FY140_16505 PF01474 Class-II DAHP synthetase family FY140_16510 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_16510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY140_16520 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY140_16525 PF13419 Haloacid dehalogenase-like hydrolase FY140_16535 PF00206 Lyase FY140_16535 PF10415 Fumarase C C-terminus FY140_16540 PF00117 Glutamine amidotransferase class-I FY140_16540 PF06418 CTP synthase N-terminus FY140_16545 PF03840 Preprotein translocase SecG subunit FY140_16550 PF00121 Triosephosphate isomerase FY140_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_16560 PF00986 DNA gyrase B subunit, carboxyl terminus FY140_16560 PF01751 Toprim domain FY140_16560 PF00204 DNA gyrase B FY140_16570 PF00574 Clp protease FY140_16580 PF01022 Bacterial regulatory protein, arsR family FY140_16585 PF13091 PLD-like domain FY140_16590 PF00072 Response regulator receiver domain FY140_16595 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY140_16595 PF01266 FAD dependent oxidoreductase FY140_16595 PF16350 FAD dependent oxidoreductase central domain FY140_16595 PF01571 Aminomethyltransferase folate-binding domain FY140_16605 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY140_16605 PF12795 Mechanosensitive ion channel porin domain FY140_16605 PF00924 Mechanosensitive ion channel FY140_16670 PF00005 ABC transporter FY140_16675 PF02405 Permease MlaE FY140_16680 PF13378 Enolase C-terminal domain-like FY140_16680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_16690 PF01515 Phosphate acetyl/butaryl transferase FY140_16690 PF03949 Malic enzyme, NAD binding domain FY140_16690 PF00390 Malic enzyme, N-terminal domain FY140_16710 PF00881 Nitroreductase family FY140_16715 PF07676 WD40-like Beta Propeller Repeat FY140_16725 PF02540 NAD synthase FY140_16725 PF00795 Carbon-nitrogen hydrolase FY140_16730 PF00884 Sulfatase FY140_16740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY140_16740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_16755 PF05698 Bacterial trigger factor protein (TF) C-terminus FY140_16755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY140_16755 PF05697 Bacterial trigger factor protein (TF) FY140_16780 PF01134 Glucose inhibited division protein A FY140_16800 PF00107 Zinc-binding dehydrogenase FY140_16800 PF08240 Alcohol dehydrogenase GroES-like domain FY140_16810 PF00550 Phosphopantetheine attachment site FY140_16815 PF13193 AMP-binding enzyme C-terminal domain FY140_16815 PF00501 AMP-binding enzyme FY140_16820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY140_16820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY140_16825 PF04715 Anthranilate synthase component I, N terminal region FY140_16825 PF00425 chorismate binding enzyme FY140_16825 PF00117 Glutamine amidotransferase class-I FY140_16830 PF01702 Queuine tRNA-ribosyltransferase FY140_16835 PF02547 Queuosine biosynthesis protein FY140_16840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY140_16845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY140_16850 PF01467 Cytidylyltransferase-like FY140_16870 PF02885 Glycosyl transferase family, helical bundle domain FY140_16870 PF00591 Glycosyl transferase family, a/b domain FY140_16875 PF00218 Indole-3-glycerol phosphate synthase FY140_16880 PF01967 MoaC family FY140_16885 PF00994 Probable molybdopterin binding domain FY140_16885 PF03454 MoeA C-terminal region (domain IV) FY140_16885 PF03453 MoeA N-terminal region (domain I and II) FY140_16890 PF00990 Diguanylate cyclase, GGDEF domain FY140_16890 PF17158 Membrane-associated sensor, integral membrane domain FY140_16900 PF02254 TrkA-N domain FY140_16900 PF00999 Sodium/hydrogen exchanger family FY140_16910 PF04055 Radical SAM superfamily FY140_16910 PF06463 Molybdenum Cofactor Synthesis C FY140_16915 PF00892 EamA-like transporter family FY140_16920 PF07690 Major Facilitator Superfamily FY140_16925 PF12804 MobA-like NTP transferase domain FY140_16930 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY140_16935 PF01551 Peptidase family M23 FY140_16945 PF01975 Survival protein SurE FY140_16950 PF02403 Seryl-tRNA synthetase N-terminal domain FY140_16950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY140_16955 PF00902 Sec-independent protein translocase protein (TatC) FY140_16960 PF02416 mttA/Hcf106 family FY140_16965 PF02416 mttA/Hcf106 family FY140_16970 PF04079 Segregation and condensation complex subunit ScpB FY140_16975 PF02616 Segregation and condensation protein ScpA FY140_16980 PF00933 Glycosyl hydrolase family 3 N terminal domain FY140_16990 PF03485 Arginyl tRNA synthetase N terminal domain FY140_16990 PF05746 DALR anticodon binding domain FY140_16990 PF00750 tRNA synthetases class I (R) FY140_16995 PF01966 HD domain FY140_16995 PF13286 Phosphohydrolase-associated domain FY140_17000 PF01521 Iron-sulphur cluster biosynthesis FY140_17010 PF08238 Sel1 repeat FY140_17020 PF08264 Anticodon-binding domain of tRNA FY140_17020 PF00133 tRNA synthetases class I (I, L, M and V) FY140_17020 PF10458 Valyl tRNA synthetase tRNA binding arm FY140_17055 PF03358 NADPH-dependent FMN reductase FY140_17060 PF00994 Probable molybdopterin binding domain FY140_17060 PF02464 Competence-damaged protein FY140_17060 PF18146 Damage-inducible protein CinA KH domain FY140_17065 PF00582 Universal stress protein family FY140_17070 PF00156 Phosphoribosyl transferase domain FY140_17075 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY140_17075 PF02867 Ribonucleotide reductase, barrel domain FY140_17115 PF03358 NADPH-dependent FMN reductase FY140_17120 PF00561 alpha/beta hydrolase fold FY140_17140 PF13533 Biotin-lipoyl like FY140_17145 PF03466 LysR substrate binding domain FY140_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_17150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY140_17155 PF03466 LysR substrate binding domain FY140_17155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_17170 PF00857 Isochorismatase family FY140_17175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_17175 PF03466 LysR substrate binding domain FY140_17180 PF00004 ATPase family associated with various cellular activities (AAA) FY140_17180 PF17862 AAA+ lid domain FY140_17180 PF01434 Peptidase family M41 FY140_17205 PF00145 C-5 cytosine-specific DNA methylase FY140_17250 PF01566 Natural resistance-associated macrophage protein FY140_17260 PF00664 ABC transporter transmembrane region FY140_17260 PF00005 ABC transporter FY140_17265 PF01594 AI-2E family transporter FY140_17270 PF00583 Acetyltransferase (GNAT) family FY140_17300 PF03129 Anticodon binding domain FY140_17300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY140_17300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY140_17300 PF02824 TGS domain FY140_17310 PF01809 Putative membrane protein insertion efficiency factor FY140_17320 PF01227 GTP cyclohydrolase I FY140_17325 PF01502 Phosphoribosyl-AMP cyclohydrolase FY140_17330 PF01734 Patatin-like phospholipase FY140_17340 PF00478 IMP dehydrogenase / GMP reductase domain FY140_17340 PF00571 CBS domain FY140_17370 PF03313 Serine dehydratase alpha chain FY140_17370 PF03315 Serine dehydratase beta chain FY140_17400 PF03466 LysR substrate binding domain FY140_17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_17410 PF01965 DJ-1/PfpI family FY140_17410 PF12833 Helix-turn-helix domain FY140_17415 PF01256 Carbohydrate kinase FY140_17415 PF03853 YjeF-related protein N-terminus FY140_17420 PF00543 Nitrogen regulatory protein P-II FY140_17425 PF00120 Glutamine synthetase, catalytic domain FY140_17425 PF03951 Glutamine synthetase, beta-Grasp domain FY140_17435 PF08755 Hemimethylated DNA-binding protein YccV like FY140_17445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_17455 PF00892 EamA-like transporter family FY140_17465 PF02559 CarD-like/TRCF domain FY140_17465 PF00270 DEAD/DEAH box helicase FY140_17465 PF00271 Helicase conserved C-terminal domain FY140_17465 PF03461 TRCF domain FY140_17465 PF17757 UvrB interaction domain FY140_17475 PF17191 RecG wedge domain FY140_17475 PF00270 DEAD/DEAH box helicase FY140_17475 PF00271 Helicase conserved C-terminal domain FY140_17485 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY140_17490 PF01402 Ribbon-helix-helix protein, copG family FY140_17505 PF01380 SIS domain FY140_17510 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_17510 PF14602 Hexapeptide repeat of succinyl-transferase FY140_17510 PF12804 MobA-like NTP transferase domain FY140_17515 PF00392 Bacterial regulatory proteins, gntR family FY140_17515 PF07729 FCD domain FY140_17520 PF02608 ABC transporter substrate-binding protein PnrA-like FY140_17525 PF02653 Branched-chain amino acid transport system / permease component FY140_17530 PF02653 Branched-chain amino acid transport system / permease component FY140_17535 PF00005 ABC transporter FY140_17545 PF01494 FAD binding domain FY140_17550 PF03547 Membrane transport protein FY140_17555 PF02683 Cytochrome C biogenesis protein transmembrane region FY140_17575 PF00313 'Cold-shock' DNA-binding domain FY140_17605 PF00665 Integrase core domain FY140_17610 PF01695 IstB-like ATP binding protein FY140_17630 PF00145 C-5 cytosine-specific DNA methylase FY140_17635 PF03852 DNA mismatch endonuclease Vsr FY140_17680 PF02687 FtsX-like permease family FY140_17680 PF00005 ABC transporter FY140_17680 PF12704 MacB-like periplasmic core domain FY140_17685 PF00005 ABC transporter FY140_17685 PF02687 FtsX-like permease family FY140_17685 PF12704 MacB-like periplasmic core domain FY140_17705 PF01521 Iron-sulphur cluster biosynthesis FY140_17710 PF01883 Iron-sulfur cluster assembly protein FY140_17715 PF00266 Aminotransferase class-V FY140_17720 PF01458 Uncharacterized protein family (UPF0051) FY140_17725 PF00005 ABC transporter FY140_17730 PF01458 Uncharacterized protein family (UPF0051) FY140_17735 PF00266 Aminotransferase class-V FY140_17740 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY140_17745 PF03702 Anhydro-N-acetylmuramic acid kinase FY140_17750 PF00579 tRNA synthetases class I (W and Y) FY140_17760 PF00578 AhpC/TSA family FY140_17765 PF04305 Protein of unknown function (DUF455) FY140_17770 PF01476 LysM domain FY140_17770 PF08525 Opacity-associated protein A N-terminal motif FY140_17770 PF01551 Peptidase family M23 FY140_17775 PF00270 DEAD/DEAH box helicase FY140_17775 PF00271 Helicase conserved C-terminal domain FY140_17790 PF00834 Ribulose-phosphate 3 epimerase family FY140_17800 PF00206 Lyase FY140_17800 PF10397 Adenylosuccinate lyase C-terminus FY140_17810 PF01259 SAICAR synthetase FY140_17815 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY140_17835 PF00155 Aminotransferase class I and II FY140_17835 PF00392 Bacterial regulatory proteins, gntR family FY140_17840 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY140_17840 PF00586 AIR synthase related protein, N-terminal domain FY140_17840 PF02769 AIR synthase related protein, C-terminal domain FY140_17860 PF00462 Glutaredoxin FY140_17865 PF07690 Major Facilitator Superfamily FY140_17870 PF00459 Inositol monophosphatase family FY140_17875 PF00459 Inositol monophosphatase family FY140_17880 PF01171 PP-loop family FY140_17885 PF04960 Glutaminase FY140_17890 PF00163 Ribosomal protein S4/S9 N-terminal domain FY140_17890 PF01479 S4 domain FY140_17895 PF03741 Integral membrane protein TerC family FY140_17905 PF00892 EamA-like transporter family FY140_17910 PF01810 LysE type translocator FY140_17915 PF01381 Helix-turn-helix FY140_17920 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB FY140_17930 PF01177 Asp/Glu/Hydantoin racemase FY140_17935 PF00588 SpoU rRNA Methylase family FY140_17945 PF00180 Isocitrate/isopropylmalate dehydrogenase FY140_17970 PF02272 DHHA1 domain FY140_17970 PF01411 tRNA synthetases class II (A) FY140_17970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY140_17975 PF00154 recA bacterial DNA recombination protein FY140_17980 PF00294 pfkB family carbohydrate kinase FY140_17985 PF04227 Indigoidine synthase A like protein FY140_17990 PF00691 OmpA family FY140_17990 PF01389 OmpA-like transmembrane domain FY140_17995 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_18000 PF00528 Binding-protein-dependent transport system inner membrane component FY140_18005 PF00528 Binding-protein-dependent transport system inner membrane component FY140_18010 PF06233 Usg-like family FY140_18015 PF08241 Methyltransferase domain FY140_18025 PF09084 NMT1/THI5 like FY140_18030 PF01037 Lrp/AsnC ligand binding domain FY140_18030 PF13404 AsnC-type helix-turn-helix domain FY140_18035 PF03167 Uracil DNA glycosylase superfamily FY140_18045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_18045 PF00512 His Kinase A (phospho-acceptor) domain FY140_18045 PF00989 PAS fold FY140_18050 PF01219 Prokaryotic diacylglycerol kinase FY140_18055 PF02277 Phosphoribosyltransferase FY140_18060 PF02654 Cobalamin-5-phosphate synthase FY140_18080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY140_18090 PF00005 ABC transporter FY140_18095 PF13407 Periplasmic binding protein domain FY140_18100 PF02653 Branched-chain amino acid transport system / permease component FY140_18105 PF00456 Transketolase, thiamine diphosphate binding domain FY140_18110 PF02779 Transketolase, pyrimidine binding domain FY140_18110 PF02780 Transketolase, C-terminal domain FY140_18115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_18115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_18120 PF04198 Putative sugar-binding domain FY140_18125 PF00106 short chain dehydrogenase FY140_18130 PF01061 ABC-2 type transporter FY140_18135 PF00005 ABC transporter FY140_18140 PF01925 Sulfite exporter TauE/SafE FY140_18150 PF08269 Cache domain FY140_18150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_18160 PF00004 ATPase family associated with various cellular activities (AAA) FY140_18160 PF16193 AAA C-terminal domain FY140_18160 PF12002 MgsA AAA+ ATPase C terminal FY140_18165 PF13180 PDZ domain FY140_18165 PF00595 PDZ domain FY140_18185 PF00920 Dehydratase family FY140_18190 PF00174 Oxidoreductase molybdopterin binding domain FY140_18195 PF01794 Ferric reductase like transmembrane component FY140_18205 PF01196 Ribosomal protein L17 FY140_18210 PF01000 RNA polymerase Rpb3/RpoA insert domain FY140_18210 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY140_18210 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY140_18215 PF00411 Ribosomal protein S11 FY140_18220 PF00416 Ribosomal protein S13/S18 FY140_18230 PF00344 SecY translocase FY140_18235 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY140_18240 PF00327 Ribosomal protein L30p/L7e FY140_18245 PF03719 Ribosomal protein S5, C-terminal domain FY140_18245 PF00333 Ribosomal protein S5, N-terminal domain FY140_18250 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY140_18255 PF00347 Ribosomal protein L6 FY140_18260 PF00410 Ribosomal protein S8 FY140_18265 PF00253 Ribosomal protein S14p/S29e FY140_18270 PF00281 Ribosomal protein L5 FY140_18270 PF00673 ribosomal L5P family C-terminus FY140_18275 PF00467 KOW motif FY140_18275 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY140_18280 PF00238 Ribosomal protein L14p/L23e FY140_18285 PF00366 Ribosomal protein S17 FY140_18290 PF00831 Ribosomal L29 protein FY140_18295 PF00252 Ribosomal protein L16p/L10e FY140_18300 PF07650 KH domain FY140_18300 PF00189 Ribosomal protein S3, C-terminal domain FY140_18305 PF00237 Ribosomal protein L22p/L17e FY140_18310 PF00203 Ribosomal protein S19 FY140_18315 PF03947 Ribosomal Proteins L2, C-terminal domain FY140_18315 PF00181 Ribosomal Proteins L2, RNA binding domain FY140_18320 PF00276 Ribosomal protein L23 FY140_18325 PF00573 Ribosomal protein L4/L1 family FY140_18330 PF00297 Ribosomal protein L3 FY140_18335 PF00338 Ribosomal protein S10p/S20e FY140_18340 PF00009 Elongation factor Tu GTP binding domain FY140_18340 PF03143 Elongation factor Tu C-terminal domain FY140_18340 PF03144 Elongation factor Tu domain 2 FY140_18345 PF00679 Elongation factor G C-terminus FY140_18345 PF14492 Elongation Factor G, domain II FY140_18345 PF03764 Elongation factor G, domain IV FY140_18345 PF03144 Elongation factor Tu domain 2 FY140_18345 PF00009 Elongation factor Tu GTP binding domain FY140_18350 PF00177 Ribosomal protein S7p/S5e FY140_18355 PF00164 Ribosomal protein S12/S23 FY140_18375 PF04998 RNA polymerase Rpb1, domain 5 FY140_18375 PF04997 RNA polymerase Rpb1, domain 1 FY140_18375 PF00623 RNA polymerase Rpb1, domain 2 FY140_18375 PF04983 RNA polymerase Rpb1, domain 3 FY140_18375 PF05000 RNA polymerase Rpb1, domain 4 FY140_18380 PF04561 RNA polymerase Rpb2, domain 2 FY140_18380 PF04560 RNA polymerase Rpb2, domain 7 FY140_18380 PF00562 RNA polymerase Rpb2, domain 6 FY140_18380 PF10385 RNA polymerase beta subunit external 1 domain FY140_18380 PF04565 RNA polymerase Rpb2, domain 3 FY140_18380 PF04563 RNA polymerase beta subunit FY140_18385 PF16320 Ribosomal protein L7/L12 dimerisation domain FY140_18385 PF00542 Ribosomal protein L7/L12 C-terminal domain FY140_18390 PF00466 Ribosomal protein L10 FY140_18395 PF00687 Ribosomal protein L1p/L10e family FY140_18400 PF00298 Ribosomal protein L11, RNA binding domain FY140_18400 PF03946 Ribosomal protein L11, N-terminal domain FY140_18405 PF02357 Transcription termination factor nusG FY140_18405 PF00467 KOW motif FY140_18410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY140_18420 PF00300 Histidine phosphatase superfamily (branch 1) FY140_18425 PF03143 Elongation factor Tu C-terminal domain FY140_18425 PF03144 Elongation factor Tu domain 2 FY140_18425 PF00009 Elongation factor Tu GTP binding domain FY140_18430 PF03741 Integral membrane protein TerC family FY140_18435 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY140_18465 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY140_18465 PF00588 SpoU rRNA Methylase family FY140_18470 PF03061 Thioesterase superfamily FY140_18495 PF13460 NAD(P)H-binding FY140_18500 PF01638 HxlR-like helix-turn-helix FY140_18515 PF02151 UvrB/uvrC motif FY140_18515 PF00271 Helicase conserved C-terminal domain FY140_18515 PF04851 Type III restriction enzyme, res subunit FY140_18515 PF12344 Ultra-violet resistance protein B FY140_18515 PF17757 UvrB interaction domain FY140_18525 PF00756 Putative esterase FY140_18525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY140_18545 PF01556 DnaJ C terminal domain FY140_18545 PF00226 DnaJ domain FY140_18545 PF00684 DnaJ central domain FY140_18565 PF00990 Diguanylate cyclase, GGDEF domain FY140_18565 PF17151 Periplasmic sensor domain FY140_18575 PF00005 ABC transporter FY140_18575 PF08402 TOBE domain FY140_18580 PF00528 Binding-protein-dependent transport system inner membrane component FY140_18585 PF01547 Bacterial extracellular solute-binding protein FY140_18590 PF00155 Aminotransferase class I and II FY140_18605 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY140_18605 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY140_18610 PF00440 Bacterial regulatory proteins, tetR family FY140_18615 PF01638 HxlR-like helix-turn-helix FY140_18625 PF06719 AraC-type transcriptional regulator N-terminus FY140_18625 PF12833 Helix-turn-helix domain FY140_18630 PF08240 Alcohol dehydrogenase GroES-like domain FY140_18630 PF00107 Zinc-binding dehydrogenase FY140_18635 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_18640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY140_18645 PF00196 Bacterial regulatory proteins, luxR family FY140_18645 PF03472 Autoinducer binding domain FY140_18650 PF14490 Helix-hairpin-helix containing domain FY140_18650 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY140_18650 PF13538 UvrD-like helicase C-terminal domain FY140_18655 PF11066 Protein of unknown function (DUF2867) FY140_18655 PF13460 NAD(P)H-binding FY140_18680 PF04542 Sigma-70 region 2 FY140_18680 PF08281 Sigma-70, region 4 FY140_18695 PF00248 Aldo/keto reductase family FY140_18710 PF10369 Small subunit of acetolactate synthase FY140_18715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY140_18715 PF00205 Thiamine pyrophosphate enzyme, central domain FY140_18715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY140_18735 PF13302 Acetyltransferase (GNAT) domain FY140_18745 PF13180 PDZ domain FY140_18750 PF01145 SPFH domain / Band 7 family FY140_18755 PF01145 SPFH domain / Band 7 family FY140_18760 PF00186 Dihydrofolate reductase FY140_18765 PF00303 Thymidylate synthase FY140_18805 PF01565 FAD binding domain FY140_18805 PF02913 FAD linked oxidases, C-terminal domain FY140_18810 PF00873 AcrB/AcrD/AcrF family FY140_18815 PF13533 Biotin-lipoyl like FY140_18830 PF13361 UvrD-like helicase C-terminal domain FY140_18830 PF00580 UvrD/REP helicase N-terminal domain FY140_18855 PF00857 Isochorismatase family FY140_18875 PF01321 Creatinase/Prolidase N-terminal domain FY140_18875 PF00557 Metallopeptidase family M24 FY140_18885 PF02630 SCO1/SenC FY140_18895 PF01584 CheW-like domain FY140_18905 PF00929 Exonuclease FY140_18910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_18910 PF03466 LysR substrate binding domain FY140_18920 PF00583 Acetyltransferase (GNAT) family FY140_18930 PF01653 NAD-dependent DNA ligase adenylation domain FY140_18930 PF03120 NAD-dependent DNA ligase OB-fold domain FY140_18930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY140_18930 PF12826 Helix-hairpin-helix motif FY140_18930 PF00533 BRCA1 C Terminus (BRCT) domain FY140_18935 PF02463 RecF/RecN/SMC N terminal domain FY140_18940 PF13525 Outer membrane lipoprotein FY140_18945 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY140_18950 PF12327 FtsZ family, C-terminal domain FY140_18950 PF00091 Tubulin/FtsZ family, GTPase domain FY140_18955 PF02491 SHS2 domain inserted in FTSA FY140_18960 PF03799 Cell division protein FtsQ FY140_18960 PF08478 POTRA domain, FtsQ-type FY140_18965 PF07478 D-ala D-ala ligase C-terminus FY140_18965 PF01820 D-ala D-ala ligase N-terminus FY140_18970 PF07690 Major Facilitator Superfamily FY140_18970 PF00083 Sugar (and other) transporter FY140_18975 PF00563 EAL domain FY140_18975 PF00990 Diguanylate cyclase, GGDEF domain FY140_18975 PF03707 Bacterial signalling protein N terminal repeat FY140_18975 PF13188 PAS domain FY140_18980 PF01565 FAD binding domain FY140_18980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY140_18985 PF02875 Mur ligase family, glutamate ligase domain FY140_18985 PF01225 Mur ligase family, catalytic domain FY140_18985 PF08245 Mur ligase middle domain FY140_18990 PF04101 Glycosyltransferase family 28 C-terminal domain FY140_18990 PF03033 Glycosyltransferase family 28 N-terminal domain FY140_18995 PF01098 Cell cycle protein FY140_19000 PF02875 Mur ligase family, glutamate ligase domain FY140_19000 PF08245 Mur ligase middle domain FY140_19005 PF00953 Glycosyl transferase family 4 FY140_19005 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY140_19010 PF01225 Mur ligase family, catalytic domain FY140_19010 PF02875 Mur ligase family, glutamate ligase domain FY140_19010 PF08245 Mur ligase middle domain FY140_19015 PF01225 Mur ligase family, catalytic domain FY140_19015 PF02875 Mur ligase family, glutamate ligase domain FY140_19015 PF08245 Mur ligase middle domain FY140_19020 PF03717 Penicillin-binding Protein dimerisation domain FY140_19020 PF00905 Penicillin binding protein transpeptidase domain FY140_19030 PF01795 MraW methylase family FY140_19035 PF02381 MraZ protein, putative antitoxin-like FY140_19070 PF01510 N-acetylmuramoyl-L-alanine amidase FY140_19075 PF05099 Tellurite resistance protein TerB FY140_19075 PF00226 DnaJ domain FY140_19080 PF00365 Phosphofructokinase FY140_19100 PF13649 Methyltransferase domain FY140_19105 PF01183 Glycosyl hydrolases family 25 FY140_19115 PF02219 Methylenetetrahydrofolate reductase FY140_19120 PF01209 ubiE/COQ5 methyltransferase family FY140_19125 PF00005 ABC transporter FY140_19125 PF12848 ABC transporter FY140_19130 PF12146 Serine aminopeptidase, S33 FY140_19135 PF02515 CoA-transferase family III FY140_19140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY140_19140 PF00205 Thiamine pyrophosphate enzyme, central domain FY140_19140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY140_19165 PF01476 LysM domain FY140_19165 PF03734 L,D-transpeptidase catalytic domain FY140_19170 PF07690 Major Facilitator Superfamily FY140_19180 PF10609 NUBPL iron-transfer P-loop NTPase FY140_19190 PF00465 Iron-containing alcohol dehydrogenase FY140_19195 PF00171 Aldehyde dehydrogenase family FY140_19200 PF00120 Glutamine synthetase, catalytic domain FY140_19200 PF03951 Glutamine synthetase, beta-Grasp domain FY140_19205 PF13520 Amino acid permease FY140_19215 PF01418 Helix-turn-helix domain, rpiR family FY140_19215 PF01380 SIS domain FY140_19220 PF13416 Bacterial extracellular solute-binding protein FY140_19235 PF08402 TOBE domain FY140_19235 PF00005 ABC transporter FY140_19240 PF00107 Zinc-binding dehydrogenase FY140_19240 PF08240 Alcohol dehydrogenase GroES-like domain FY140_19255 PF07690 Major Facilitator Superfamily FY140_19260 PF02607 B12 binding domain FY140_19260 PF02574 Homocysteine S-methyltransferase FY140_19260 PF00809 Pterin binding enzyme FY140_19260 PF02310 B12 binding domain FY140_19260 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY140_19280 PF13505 Outer membrane protein beta-barrel domain FY140_19295 PF04402 Protein of unknown function (DUF541) FY140_19305 PF01894 Uncharacterised protein family UPF0047 FY140_19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_19310 PF01590 GAF domain FY140_19310 PF08446 PAS fold FY140_19310 PF00360 Phytochrome region FY140_19310 PF00512 His Kinase A (phospho-acceptor) domain FY140_19320 PF03979 Sigma-70 factor, region 1.1 FY140_19320 PF00140 Sigma-70 factor, region 1.2 FY140_19320 PF04542 Sigma-70 region 2 FY140_19320 PF04539 Sigma-70 region 3 FY140_19320 PF04545 Sigma-70, region 4 FY140_19320 PF04546 Sigma-70, non-essential region FY140_19325 PF01807 CHC2 zinc finger FY140_19325 PF08278 DNA primase DnaG DnaB-binding FY140_19325 PF08275 DNA primase catalytic core, N-terminal domain FY140_19325 PF10410 DnaB-helicase binding domain of primase FY140_19335 PF00117 Glutamine amidotransferase class-I FY140_19335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY140_19340 PF01554 MatE FY140_19345 PF02743 Cache domain FY140_19345 PF00672 HAMP domain FY140_19345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_19355 PF04228 Putative neutral zinc metallopeptidase FY140_19370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_19370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY140_19370 PF02142 MGS-like domain FY140_19380 PF00990 Diguanylate cyclase, GGDEF domain FY140_19380 PF17158 Membrane-associated sensor, integral membrane domain FY140_19395 PF01272 Transcription elongation factor, GreA/GreB, C-term FY140_19395 PF03449 Transcription elongation factor, N-terminal FY140_19400 PF00534 Glycosyl transferases group 1 FY140_19405 PF01037 Lrp/AsnC ligand binding domain FY140_19410 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_19415 PF03466 LysR substrate binding domain FY140_19415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_19425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY140_19440 PF03466 LysR substrate binding domain FY140_19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_19450 PF01699 Sodium/calcium exchanger protein FY140_19455 PF00155 Aminotransferase class I and II FY140_19460 PF00563 EAL domain FY140_19460 PF05231 MASE1 FY140_19475 PF00313 'Cold-shock' DNA-binding domain FY140_19480 PF00753 Metallo-beta-lactamase superfamily FY140_19490 PF12802 MarR family FY140_19495 PF00072 Response regulator receiver domain FY140_19495 PF00486 Transcriptional regulatory protein, C terminal FY140_19500 PF00512 His Kinase A (phospho-acceptor) domain FY140_19500 PF16527 Two-component sensor protein CpxA, periplasmic domain FY140_19500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_19500 PF00672 HAMP domain FY140_19505 PF01588 Putative tRNA binding domain FY140_19510 PF03807 NADP oxidoreductase coenzyme F420-dependent FY140_19510 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY140_19525 PF01790 Prolipoprotein diacylglyceryl transferase FY140_19535 PF02578 Multi-copper polyphenol oxidoreductase laccase FY140_19540 PF01321 Creatinase/Prolidase N-terminal domain FY140_19540 PF00557 Metallopeptidase family M24 FY140_19550 PF14572 Phosphoribosyl synthetase-associated domain FY140_19550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY140_19570 PF00535 Glycosyl transferase family 2 FY140_19575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_19575 PF00672 HAMP domain FY140_19580 PF00171 Aldehyde dehydrogenase family FY140_19585 PF02954 Bacterial regulatory protein, Fis family FY140_19590 PF13188 PAS domain FY140_19590 PF03707 Bacterial signalling protein N terminal repeat FY140_19590 PF00563 EAL domain FY140_19590 PF00990 Diguanylate cyclase, GGDEF domain FY140_19595 PF14693 Ribosomal protein TL5, C-terminal domain FY140_19595 PF01386 Ribosomal L25p family FY140_19600 PF00563 EAL domain FY140_19600 PF00990 Diguanylate cyclase, GGDEF domain FY140_19600 PF08447 PAS fold FY140_19600 PF08448 PAS fold FY140_19610 PF01195 Peptidyl-tRNA hydrolase FY140_19620 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY140_19625 PF06071 Protein of unknown function (DUF933) FY140_19625 PF01926 50S ribosome-binding GTPase FY140_19640 PF00156 Phosphoribosyl transferase domain FY140_19650 PF02167 Cytochrome C1 family FY140_19650 PF00032 Cytochrome b(C-terminal)/b6/petD FY140_19650 PF00033 Cytochrome b/b6/petB FY140_19655 PF00032 Cytochrome b(C-terminal)/b6/petD FY140_19655 PF00033 Cytochrome b/b6/petB FY140_19660 PF00355 Rieske [2Fe-2S] domain FY140_19660 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY140_19670 PF00664 ABC transporter transmembrane region FY140_19670 PF00005 ABC transporter FY140_19680 PF00664 ABC transporter transmembrane region FY140_19680 PF00005 ABC transporter FY140_19685 PF00149 Calcineurin-like phosphoesterase FY140_19690 PF00588 SpoU rRNA Methylase family FY140_19695 PF02690 Na+/Pi-cotransporter FY140_19705 PF01218 Coproporphyrinogen III oxidase FY140_19720 PF01743 Poly A polymerase head domain FY140_19720 PF12627 Probable RNA and SrmB- binding site of polymerase A FY140_19720 PF13735 tRNA nucleotidyltransferase domain 2 putative FY140_19725 PF00293 NUDIX domain FY140_19735 PF07726 ATPase family associated with various cellular activities (AAA) FY140_19735 PF17863 AAA lid domain FY140_19755 PF00583 Acetyltransferase (GNAT) family FY140_19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_19760 PF03466 LysR substrate binding domain FY140_19770 PF07690 Major Facilitator Superfamily FY140_19780 PF13409 Glutathione S-transferase, N-terminal domain FY140_19785 PF00293 NUDIX domain FY140_19795 PF00682 HMGL-like FY140_19795 PF08502 LeuA allosteric (dimerisation) domain FY140_19810 PF03594 Benzoate membrane transport protein FY140_19820 PF06532 Negative regulator of sigma F FY140_19825 PF04545 Sigma-70, region 4 FY140_19825 PF04542 Sigma-70 region 2 FY140_19835 PF00574 Clp protease FY140_19840 PF04955 HupE / UreJ protein FY140_19850 PF14489 QueF-like protein FY140_19855 PF01545 Cation efflux family FY140_19855 PF16916 Dimerisation domain of Zinc Transporter FY140_19865 PF13458 Periplasmic binding protein FY140_19875 PF01022 Bacterial regulatory protein, arsR family FY140_19880 PF00005 ABC transporter FY140_19880 PF00571 CBS domain FY140_19885 PF00528 Binding-protein-dependent transport system inner membrane component FY140_19890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY140_19895 PF00265 Thymidine kinase FY140_19900 PF00127 Copper binding proteins, plastocyanin/azurin family FY140_19910 PF00196 Bacterial regulatory proteins, luxR family FY140_19910 PF03472 Autoinducer binding domain FY140_19915 PF03350 Uncharacterized protein family, UPF0114 FY140_19920 PF00593 TonB dependent receptor FY140_19920 PF04886 PT repeat FY140_19920 PF07715 TonB-dependent Receptor Plug Domain FY140_19930 PF00425 chorismate binding enzyme FY140_19930 PF04715 Anthranilate synthase component I, N terminal region FY140_19930 PF00117 Glutamine amidotransferase class-I FY140_19940 PF01966 HD domain FY140_19940 PF11871 Domain of unknown function (DUF3391) FY140_19945 PF13382 Adenine deaminase C-terminal domain FY140_19945 PF01979 Amidohydrolase family FY140_19955 PF00583 Acetyltransferase (GNAT) family FY140_19960 PF00128 Alpha amylase, catalytic domain FY140_19965 PF00294 pfkB family carbohydrate kinase FY140_19985 PF01926 50S ribosome-binding GTPase FY140_19985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY140_20005 PF05992 SbmA/BacA-like family FY140_20015 PF00557 Metallopeptidase family M24 FY140_20030 PF01799 [2Fe-2S] binding domain FY140_20030 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_20035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY140_20035 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY140_20045 PF03466 LysR substrate binding domain FY140_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_20060 PF01979 Amidohydrolase family FY140_20070 PF01070 FMN-dependent dehydrogenase FY140_20075 PF00893 Small Multidrug Resistance protein FY140_20080 PF17932 Tetracyclin repressor-like, C-terminal domain FY140_20080 PF00440 Bacterial regulatory proteins, tetR family FY140_20085 PF07943 Penicillin-binding protein 5, C-terminal domain FY140_20085 PF00768 D-alanyl-D-alanine carboxypeptidase FY140_20095 PF00576 HIUase/Transthyretin family FY140_20100 PF04115 Ureidoglycolate lyase FY140_20125 PF09349 OHCU decarboxylase FY140_20125 PF01014 Uricase FY140_20135 PF06299 Protein of unknown function (DUF1045) FY140_20140 PF01266 FAD dependent oxidoreductase FY140_20145 PF01266 FAD dependent oxidoreductase FY140_20145 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY140_20150 PF00072 Response regulator receiver domain FY140_20150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY140_20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_20150 PF00512 His Kinase A (phospho-acceptor) domain FY140_20150 PF00672 HAMP domain FY140_20150 PF01627 Hpt domain FY140_20155 PF00271 Helicase conserved C-terminal domain FY140_20155 PF00270 DEAD/DEAH box helicase FY140_20165 PF07681 DoxX FY140_20170 PF01476 LysM domain FY140_20170 PF03734 L,D-transpeptidase catalytic domain FY140_20180 PF14403 Circularly permuted ATP-grasp type 2 FY140_20185 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY140_20185 PF14403 Circularly permuted ATP-grasp type 2 FY140_20190 PF08379 Bacterial transglutaminase-like N-terminal region FY140_20190 PF01841 Transglutaminase-like superfamily FY140_20215 PF02653 Branched-chain amino acid transport system / permease component FY140_20220 PF00005 ABC transporter FY140_20225 PF13407 Periplasmic binding protein domain FY140_20230 PF03466 LysR substrate binding domain FY140_20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_20255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_20255 PF00672 HAMP domain FY140_20260 PF07690 Major Facilitator Superfamily FY140_20270 PF02574 Homocysteine S-methyltransferase FY140_20270 PF00809 Pterin binding enzyme FY140_20270 PF02310 B12 binding domain FY140_20270 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY140_20270 PF02607 B12 binding domain FY140_20275 PF00528 Binding-protein-dependent transport system inner membrane component FY140_20280 PF00528 Binding-protein-dependent transport system inner membrane component FY140_20285 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY140_20290 PF00005 ABC transporter FY140_20310 PF00331 Glycosyl hydrolase family 10 FY140_20315 PF00535 Glycosyl transferase family 2 FY140_20330 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY140_20345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY140_20345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY140_20345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY140_20345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY140_20350 PF01152 Bacterial-like globin FY140_20370 PF08362 YcdC-like protein, C-terminal region FY140_20370 PF00440 Bacterial regulatory proteins, tetR family FY140_20375 PF07687 Peptidase dimerisation domain FY140_20375 PF01546 Peptidase family M20/M25/M40 FY140_20380 PF01979 Amidohydrolase family FY140_20385 PF00293 NUDIX domain FY140_20390 PF00005 ABC transporter FY140_20395 PF00528 Binding-protein-dependent transport system inner membrane component FY140_20400 PF00528 Binding-protein-dependent transport system inner membrane component FY140_20415 PF00873 AcrB/AcrD/AcrF family FY140_20425 PF00753 Metallo-beta-lactamase superfamily FY140_20425 PF12706 Beta-lactamase superfamily domain FY140_20430 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY140_20435 PF01730 UreF FY140_20440 PF02814 UreE urease accessory protein, N-terminal domain FY140_20440 PF05194 UreE urease accessory protein, C-terminal domain FY140_20445 PF08534 Redoxin FY140_20455 PF01979 Amidohydrolase family FY140_20455 PF00449 Urease alpha-subunit, N-terminal domain FY140_20465 PF07007 Lysozyme inhibitor LprI FY140_20475 PF00699 Urease beta subunit FY140_20480 PF06906 Protein of unknown function (DUF1272) FY140_20485 PF00547 Urease, gamma subunit FY140_20490 PF01774 UreD urease accessory protein FY140_20500 PF00005 ABC transporter FY140_20505 PF00005 ABC transporter FY140_20505 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY140_20515 PF02653 Branched-chain amino acid transport system / permease component FY140_20525 PF10931 Protein of unknown function (DUF2735) FY140_20530 PF00120 Glutamine synthetase, catalytic domain FY140_20530 PF03951 Glutamine synthetase, beta-Grasp domain FY140_20535 PF00106 short chain dehydrogenase FY140_20540 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY140_20540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_20540 PF00512 His Kinase A (phospho-acceptor) domain FY140_20540 PF01627 Hpt domain FY140_20540 PF00989 PAS fold FY140_20540 PF00072 Response regulator receiver domain FY140_20545 PF00072 Response regulator receiver domain FY140_20555 PF13458 Periplasmic binding protein FY140_20565 PF00005 ABC transporter FY140_20570 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY140_20570 PF00005 ABC transporter FY140_20575 PF11862 Domain of unknown function (DUF3382) FY140_20575 PF02653 Branched-chain amino acid transport system / permease component FY140_20580 PF02653 Branched-chain amino acid transport system / permease component FY140_20585 PF00459 Inositol monophosphatase family FY140_20615 PF00486 Transcriptional regulatory protein, C terminal FY140_20615 PF00072 Response regulator receiver domain FY140_20635 PF10090 Histidine phosphotransferase C-terminal domain FY140_20650 PF00588 SpoU rRNA Methylase family FY140_20660 PF00849 RNA pseudouridylate synthase FY140_20670 PF00140 Sigma-70 factor, region 1.2 FY140_20670 PF04542 Sigma-70 region 2 FY140_20670 PF04545 Sigma-70, region 4 FY140_20680 PF00709 Adenylosuccinate synthetase FY140_20710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_20720 PF03167 Uracil DNA glycosylase superfamily FY140_20725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY140_20730 PF04304 Protein of unknown function (DUF454) FY140_20735 PF00005 ABC transporter FY140_20740 PF01032 FecCD transport family FY140_20745 PF01497 Periplasmic binding protein FY140_20755 PF06228 Haem utilisation ChuX/HutX FY140_20765 PF00551 Formyl transferase FY140_20770 PF00672 HAMP domain FY140_20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_20770 PF00512 His Kinase A (phospho-acceptor) domain FY140_20775 PF00072 Response regulator receiver domain FY140_20775 PF00486 Transcriptional regulatory protein, C terminal FY140_20790 PF03401 Tripartite tricarboxylate transporter family receptor FY140_20800 PF01970 Tripartite tricarboxylate transporter TctA family FY140_20815 PF01032 FecCD transport family FY140_20820 PF01032 FecCD transport family FY140_20825 PF00005 ABC transporter FY140_20830 PF00210 Ferritin-like domain FY140_20845 PF00248 Aldo/keto reductase family FY140_20850 PF07690 Major Facilitator Superfamily FY140_20855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_20855 PF03466 LysR substrate binding domain FY140_20860 PF03466 LysR substrate binding domain FY140_20860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_20865 PF07859 alpha/beta hydrolase fold FY140_20870 PF13533 Biotin-lipoyl like FY140_20875 PF00873 AcrB/AcrD/AcrF family FY140_20890 PF13091 PLD-like domain FY140_20890 PF13396 Phospholipase_D-nuclease N-terminal FY140_20895 PF08543 Phosphomethylpyrimidine kinase FY140_20900 PF00484 Carbonic anhydrase FY140_20910 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY140_20910 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY140_20915 PF00083 Sugar (and other) transporter FY140_20920 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY140_20920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY140_20920 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY140_20925 PF02233 NAD(P) transhydrogenase beta subunit FY140_20930 PF01613 Flavin reductase like domain FY140_20935 PF00881 Nitroreductase family FY140_20940 PF00561 alpha/beta hydrolase fold FY140_20945 PF01042 Endoribonuclease L-PSP FY140_20950 PF00857 Isochorismatase family FY140_20955 PF00296 Luciferase-like monooxygenase FY140_20960 PF01126 Heme oxygenase FY140_20965 PF00701 Dihydrodipicolinate synthetase family FY140_20970 PF00392 Bacterial regulatory proteins, gntR family FY140_20970 PF07729 FCD domain FY140_20980 PF00528 Binding-protein-dependent transport system inner membrane component FY140_20985 PF00528 Binding-protein-dependent transport system inner membrane component FY140_20990 PF00005 ABC transporter FY140_20990 PF17912 MalK OB fold domain FY140_20990 PF03459 TOBE domain FY140_20995 PF00294 pfkB family carbohydrate kinase FY140_21000 PF03576 Peptidase family S58 FY140_21005 PF01063 Amino-transferase class IV FY140_21010 PF03466 LysR substrate binding domain FY140_21010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_21020 PF00005 ABC transporter FY140_21020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_21025 PF00005 ABC transporter FY140_21025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_21030 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_21030 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21035 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_21045 PF01244 Membrane dipeptidase (Peptidase family M19) FY140_21055 PF03706 Lysylphosphatidylglycerol synthase TM region FY140_21055 PF09924 Uncharacterised conserved protein (DUF2156) FY140_21070 PF07690 Major Facilitator Superfamily FY140_21080 PF00775 Dioxygenase FY140_21080 PF04444 Catechol dioxygenase N terminus FY140_21085 PF00465 Iron-containing alcohol dehydrogenase FY140_21090 PF04909 Amidohydrolase FY140_21095 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY140_21095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY140_21100 PF01613 Flavin reductase like domain FY140_21120 PF00512 His Kinase A (phospho-acceptor) domain FY140_21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_21125 PF00486 Transcriptional regulatory protein, C terminal FY140_21125 PF00072 Response regulator receiver domain FY140_21135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY140_21140 PF08402 TOBE domain FY140_21140 PF00005 ABC transporter FY140_21145 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21160 PF00486 Transcriptional regulatory protein, C terminal FY140_21160 PF00072 Response regulator receiver domain FY140_21165 PF08448 PAS fold FY140_21165 PF13188 PAS domain FY140_21165 PF00072 Response regulator receiver domain FY140_21165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_21165 PF00512 His Kinase A (phospho-acceptor) domain FY140_21170 PF00202 Aminotransferase class-III FY140_21175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_21175 PF03466 LysR substrate binding domain FY140_21210 PF01259 SAICAR synthetase FY140_21220 PF00529 HlyD membrane-fusion protein of T1SS FY140_21220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_21225 PF00873 AcrB/AcrD/AcrF family FY140_21230 PF02321 Outer membrane efflux protein FY140_21235 PF01132 Elongation factor P (EF-P) OB domain FY140_21235 PF08207 Elongation factor P (EF-P) KOW-like domain FY140_21235 PF09285 Elongation factor P, C-terminal FY140_21240 PF00152 tRNA synthetases class II (D, K and N) FY140_21245 PF04055 Radical SAM superfamily FY140_21245 PF12544 Lysine-2,3-aminomutase FY140_21260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_21260 PF03466 LysR substrate binding domain FY140_21265 PF01266 FAD dependent oxidoreductase FY140_21275 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21280 PF00005 ABC transporter FY140_21280 PF03459 TOBE domain FY140_21290 PF03576 Peptidase family S58 FY140_21295 PF05690 Thiazole biosynthesis protein ThiG FY140_21305 PF01266 FAD dependent oxidoreductase FY140_21310 PF01964 Radical SAM ThiC family FY140_21310 PF13667 ThiC-associated domain FY140_21315 PF00550 Phosphopantetheine attachment site FY140_21345 PF00664 ABC transporter transmembrane region FY140_21345 PF00005 ABC transporter FY140_21350 PF00027 Cyclic nucleotide-binding domain FY140_21350 PF13545 Crp-like helix-turn-helix domain FY140_21360 PF00211 Adenylate and Guanylate cyclase catalytic domain FY140_21360 PF00672 HAMP domain FY140_21370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY140_21370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY140_21370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY140_21390 PF00005 ABC transporter FY140_21390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_21395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_21400 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21405 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_21405 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21415 PF13439 Glycosyltransferase Family 4 FY140_21415 PF00534 Glycosyl transferases group 1 FY140_21420 PF04101 Glycosyltransferase family 28 C-terminal domain FY140_21420 PF03033 Glycosyltransferase family 28 N-terminal domain FY140_21425 PF03932 CutC family FY140_21430 PF07690 Major Facilitator Superfamily FY140_21440 PF02838 Glycosyl hydrolase family 20, domain 2 FY140_21440 PF00728 Glycosyl hydrolase family 20, catalytic domain FY140_21450 PF01380 SIS domain FY140_21450 PF01418 Helix-turn-helix domain, rpiR family FY140_21460 PF17912 MalK OB fold domain FY140_21460 PF00005 ABC transporter FY140_21465 PF01547 Bacterial extracellular solute-binding protein FY140_21470 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21475 PF00528 Binding-protein-dependent transport system inner membrane component FY140_21490 PF07702 UTRA domain FY140_21490 PF00392 Bacterial regulatory proteins, gntR family FY140_21495 PF01380 SIS domain FY140_21500 PF01979 Amidohydrolase family FY140_21505 PF00480 ROK family FY140_21510 PF01494 FAD binding domain FY140_21515 PF01569 PAP2 superfamily FY140_21520 PF13288 DXP reductoisomerase C-terminal domain FY140_21520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY140_21520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY140_21530 PF00155 Aminotransferase class I and II FY140_21540 PF17243 POTRA domain TamA domain 1 FY140_21540 PF01103 Surface antigen FY140_21540 PF07244 Surface antigen variable number repeat FY140_21550 PF01584 CheW-like domain FY140_21555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_21555 PF08447 PAS fold FY140_21555 PF13426 PAS domain FY140_21560 PF02634 FdhD/NarQ family FY140_21565 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY140_21570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY140_21570 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY140_21575 PF00231 ATP synthase FY140_21580 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY140_21580 PF00306 ATP synthase alpha/beta chain, C terminal domain FY140_21580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY140_21585 PF00213 ATP synthase delta (OSCP) subunit FY140_21595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY140_21595 PF18074 Primosomal protein N C-terminal domain FY140_21595 PF00270 DEAD/DEAH box helicase FY140_21595 PF17764 3′ DNA-binding domain (3′BD) FY140_21600 PF00589 Phage integrase family FY140_21600 PF02899 Phage integrase, N-terminal SAM-like domain FY140_21620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY140_21620 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_21625 PF01810 LysE type translocator FY140_21635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY140_21635 PF00364 Biotin-requiring enzyme FY140_21635 PF02817 e3 binding domain FY140_21640 PF16078 2-oxoglutarate dehydrogenase N-terminus FY140_21640 PF16870 2-oxoglutarate dehydrogenase C-terminal FY140_21640 PF02779 Transketolase, pyrimidine binding domain FY140_21640 PF00676 Dehydrogenase E1 component FY140_21645 PF00549 CoA-ligase FY140_21645 PF02629 CoA binding domain FY140_21650 PF00549 CoA-ligase FY140_21650 PF08442 ATP-grasp domain FY140_21655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY140_21655 PF00056 lactate/malate dehydrogenase, NAD binding domain FY140_21660 PF03969 AFG1-like ATPase FY140_21665 PF02974 Protease inhibitor Inh FY140_21670 PF13237 4Fe-4S dicluster domain FY140_21670 PF13085 2Fe-2S iron-sulfur cluster binding domain FY140_21675 PF00890 FAD binding domain FY140_21675 PF02910 Fumarate reductase flavoprotein C-term FY140_21685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY140_21710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY140_21710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY140_21715 PF00814 Glycoprotease family FY140_21720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY140_21720 PF03900 Porphobilinogen deaminase, C-terminal domain FY140_21745 PF00117 Glutamine amidotransferase class-I FY140_21755 PF02325 YGGT family FY140_21760 PF02594 Uncharacterised ACR, YggU family COG1872 FY140_21765 PF00719 Inorganic pyrophosphatase FY140_21775 PF00679 Elongation factor G C-terminus FY140_21775 PF00009 Elongation factor Tu GTP binding domain FY140_21775 PF03144 Elongation factor Tu domain 2 FY140_21780 PF01432 Peptidase family M3 FY140_21790 PF01047 MarR family FY140_21795 PF07690 Major Facilitator Superfamily FY140_21800 PF00764 Arginosuccinate synthase FY140_21805 PF00106 short chain dehydrogenase FY140_21810 PF01810 LysE type translocator FY140_21815 PF00005 ABC transporter FY140_21820 PF02653 Branched-chain amino acid transport system / permease component FY140_21830 PF04055 Radical SAM superfamily FY140_21845 PF01329 Pterin 4 alpha carbinolamine dehydratase FY140_21850 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY140_21855 PF02834 LigT like Phosphoesterase FY140_21860 PF13472 GDSL-like Lipase/Acylhydrolase family FY140_21865 PF00005 ABC transporter FY140_21875 PF01027 Inhibitor of apoptosis-promoting Bax1 FY140_21890 PF00330 Aconitase family (aconitate hydratase) FY140_21890 PF00694 Aconitase C-terminal domain FY140_21895 PF00005 ABC transporter FY140_21900 PF03379 CcmB protein FY140_21905 PF01578 Cytochrome C assembly protein FY140_21915 PF08534 Redoxin FY140_21920 PF00990 Diguanylate cyclase, GGDEF domain FY140_21925 PF10755 Protein of unknown function (DUF2585) FY140_21930 PF04279 Intracellular septation protein A FY140_21935 PF00448 SRP54-type protein, GTPase domain FY140_21935 PF02881 SRP54-type protein, helical bundle domain FY140_21940 PF04055 Radical SAM superfamily FY140_21940 PF00919 Uncharacterized protein family UPF0004 FY140_21945 PF01678 Diaminopimelate epimerase FY140_21950 PF12706 Beta-lactamase superfamily domain FY140_21955 PF02978 Signal peptide binding domain FY140_21955 PF00448 SRP54-type protein, GTPase domain FY140_21955 PF02881 SRP54-type protein, helical bundle domain FY140_21960 PF02153 Prephenate dehydrogenase FY140_21960 PF01817 Chorismate mutase type II FY140_21965 PF00886 Ribosomal protein S16 FY140_21970 PF05239 PRC-barrel domain FY140_21970 PF01782 RimM N-terminal domain FY140_21975 PF01746 tRNA (Guanine-1)-methyltransferase FY140_21985 PF01245 Ribosomal protein L19 FY140_21995 PF00005 ABC transporter FY140_21995 PF00664 ABC transporter transmembrane region FY140_22000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_22000 PF00529 HlyD membrane-fusion protein of T1SS FY140_22010 PF07690 Major Facilitator Superfamily FY140_22015 PF00330 Aconitase family (aconitate hydratase) FY140_22030 PF01435 Peptidase family M48 FY140_22035 PF00005 ABC transporter FY140_22040 PF00528 Binding-protein-dependent transport system inner membrane component FY140_22045 PF01547 Bacterial extracellular solute-binding protein FY140_22055 PF00005 ABC transporter FY140_22055 PF16326 ABC transporter C-terminal domain FY140_22065 PF04204 Homoserine O-succinyltransferase FY140_22070 PF01263 Aldose 1-epimerase FY140_22075 PF00912 Transglycosylase FY140_22080 PF00348 Polyprenyl synthetase FY140_22085 PF00691 OmpA family FY140_22085 PF13488 Glycine zipper FY140_22090 PF04551 GcpE protein FY140_22095 PF07690 Major Facilitator Superfamily FY140_22100 PF00455 DeoR C terminal sensor domain FY140_22100 PF08220 DeoR-like helix-turn-helix domain FY140_22105 PF00289 Biotin carboxylase, N-terminal domain FY140_22105 PF02785 Biotin carboxylase C-terminal domain FY140_22105 PF00364 Biotin-requiring enzyme FY140_22105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY140_22105 PF00682 HMGL-like FY140_22105 PF02436 Conserved carboxylase domain FY140_22110 PF00196 Bacterial regulatory proteins, luxR family FY140_22110 PF00072 Response regulator receiver domain FY140_22115 PF00664 ABC transporter transmembrane region FY140_22115 PF00005 ABC transporter FY140_22125 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY140_22125 PF06165 Glycosyltransferase family 36 FY140_22125 PF10091 Putative glucoamylase FY140_22130 PF01546 Peptidase family M20/M25/M40 FY140_22130 PF07687 Peptidase dimerisation domain FY140_22135 PF01266 FAD dependent oxidoreductase FY140_22140 PF00291 Pyridoxal-phosphate dependent enzyme FY140_22145 PF00920 Dehydratase family FY140_22150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY140_22150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY140_22155 PF01370 NAD dependent epimerase/dehydratase family FY140_22160 PF02913 FAD linked oxidases, C-terminal domain FY140_22160 PF01565 FAD binding domain FY140_22165 PF00392 Bacterial regulatory proteins, gntR family FY140_22165 PF07729 FCD domain FY140_22175 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY140_22180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY140_22185 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_22190 PF16177 Acetyl-coenzyme A synthetase N-terminus FY140_22190 PF00501 AMP-binding enzyme FY140_22190 PF13193 AMP-binding enzyme C-terminal domain FY140_22200 PF01168 Alanine racemase, N-terminal domain FY140_22205 PF08264 Anticodon-binding domain of tRNA FY140_22205 PF00133 tRNA synthetases class I (I, L, M and V) FY140_22205 PF13603 Leucyl-tRNA synthetase, Domain 2 FY140_22220 PF00037 4Fe-4S binding domain FY140_22220 PF11953 Domain of unknown function (DUF3470) FY140_22225 PF01479 S4 domain FY140_22225 PF00579 tRNA synthetases class I (W and Y) FY140_22235 PF01494 FAD binding domain FY140_22245 PF00543 Nitrogen regulatory protein P-II FY140_22250 PF00909 Ammonium Transporter Family FY140_22255 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY140_22255 PF17854 FtsK alpha domain FY140_22255 PF09397 Ftsk gamma domain FY140_22255 PF01580 FtsK/SpoIIIE family FY140_22260 PF03548 Outer membrane lipoprotein carrier protein LolA FY140_22275 PF00072 Response regulator receiver domain FY140_22275 PF00486 Transcriptional regulatory protein, C terminal FY140_22285 PF02559 CarD-like/TRCF domain FY140_22290 PF05088 Bacterial NAD-glutamate dehydrogenase FY140_22295 PF11700 Vacuole effluxer Atg22 like FY140_22300 PF05233 PHB accumulation regulatory domain FY140_22300 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY140_22305 PF00108 Thiolase, N-terminal domain FY140_22305 PF02803 Thiolase, C-terminal domain FY140_22320 PF00210 Ferritin-like domain FY140_22325 PF00293 NUDIX domain FY140_22330 PF04748 Divergent polysaccharide deacetylase FY140_22335 PF13180 PDZ domain FY140_22335 PF03572 Peptidase family S41 FY140_22345 PF02590 Predicted SPOUT methyltransferase FY140_22355 PF01467 Cytidylyltransferase-like FY140_22360 PF00171 Aldehyde dehydrogenase family FY140_22365 PF00696 Amino acid kinase family FY140_22365 PF01472 PUA domain FY140_22370 PF01018 GTP1/OBG FY140_22370 PF01926 50S ribosome-binding GTPase FY140_22375 PF13302 Acetyltransferase (GNAT) domain FY140_22385 PF01016 Ribosomal L27 protein FY140_22390 PF00829 Ribosomal prokaryotic L21 protein FY140_22405 PF03328 HpcH/HpaI aldolase/citrate lyase family FY140_22415 PF00694 Aconitase C-terminal domain FY140_22420 PF00180 Isocitrate/isopropylmalate dehydrogenase FY140_22425 PF03150 Di-haem cytochrome c peroxidase FY140_22430 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY140_22430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY140_22435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_22440 PF01888 CbiD FY140_22445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_22455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_22460 PF02571 Precorrin-6x reductase CbiJ/CobK FY140_22465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_22470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_22475 PF02570 Precorrin-8X methylmutase FY140_22480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY140_22485 PF02514 CobN/Magnesium Chelatase FY140_22490 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY140_22490 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY140_22500 PF12557 Cob(I)alamin adenosyltransferase N terminal FY140_22500 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY140_22505 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY140_22505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY140_22510 PF03186 CobD/Cbib protein FY140_22515 PF00155 Aminotransferase class I and II FY140_22520 PF13378 Enolase C-terminal domain-like FY140_22520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_22525 PF05336 L-rhamnose mutarotase FY140_22530 PF01232 Mannitol dehydrogenase Rossmann domain FY140_22530 PF08125 Mannitol dehydrogenase C-terminal domain FY140_22535 PF08240 Alcohol dehydrogenase GroES-like domain FY140_22535 PF00107 Zinc-binding dehydrogenase FY140_22545 PF00248 Aldo/keto reductase family FY140_22555 PF02653 Branched-chain amino acid transport system / permease component FY140_22560 PF00005 ABC transporter FY140_22565 PF07729 FCD domain FY140_22565 PF00392 Bacterial regulatory proteins, gntR family FY140_22570 PF08666 SAF domain FY140_22570 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY140_22575 PF02142 MGS-like domain FY140_22575 PF01808 AICARFT/IMPCHase bienzyme FY140_22585 PF01029 NusB family FY140_22585 PF01189 16S rRNA methyltransferase RsmB/F FY140_22590 PF01435 Peptidase family M48 FY140_22600 PF17762 HTH domain found in ParB protein FY140_22600 PF02195 ParB-like nuclease domain FY140_22605 PF13614 AAA domain FY140_22610 PF02527 rRNA small subunit methyltransferase G FY140_22615 PF01134 Glucose inhibited division protein A FY140_22615 PF13932 GidA associated domain FY140_22620 PF10396 GTP-binding protein TrmE N-terminus FY140_22620 PF01926 50S ribosome-binding GTPase FY140_22620 PF12631 MnmE helical domain FY140_22625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY140_22625 PF07497 Rho termination factor, RNA-binding domain FY140_22625 PF07498 Rho termination factor, N-terminal domain FY140_22630 PF03653 Uncharacterised protein family (UPF0093) FY140_22635 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY140_22640 PF03618 Kinase/pyrophosphorylase FY140_22645 PF02545 Maf-like protein FY140_22650 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY140_22650 PF01488 Shikimate / quinate 5-dehydrogenase FY140_22650 PF08501 Shikimate dehydrogenase substrate binding domain FY140_22655 PF01121 Dephospho-CoA kinase FY140_22660 PF00929 Exonuclease FY140_22665 PF02556 Preprotein translocase subunit SecB FY140_22670 PF04186 FxsA cytoplasmic membrane protein FY140_22680 PF06725 3D domain FY140_22680 PF03562 MltA specific insert domain FY140_22695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_22695 PF00204 DNA gyrase B FY140_22695 PF01751 Toprim domain FY140_22695 PF00986 DNA gyrase B subunit, carboxyl terminus FY140_22705 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY140_22720 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY140_22725 PF00291 Pyridoxal-phosphate dependent enzyme FY140_22730 PF00290 Tryptophan synthase alpha chain FY140_22735 PF01039 Carboxyl transferase domain FY140_22740 PF08245 Mur ligase middle domain FY140_22745 PF00085 Thioredoxin FY140_22750 PF12705 PD-(D/E)XK nuclease superfamily FY140_22750 PF00580 UvrD/REP helicase N-terminal domain FY140_22750 PF13361 UvrD-like helicase C-terminal domain FY140_22760 PF12804 MobA-like NTP transferase domain FY140_22765 PF01636 Phosphotransferase enzyme family FY140_22770 PF00512 His Kinase A (phospho-acceptor) domain FY140_22770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_22775 PF05221 S-adenosyl-L-homocysteine hydrolase FY140_22775 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY140_22780 PF00381 PTS HPr component phosphorylation site FY140_22785 PF03610 PTS system fructose IIA component FY140_22785 PF03830 PTS system sorbose subfamily IIB component FY140_22790 PF07475 HPr Serine kinase C-terminal domain FY140_22790 PF02603 HPr Serine kinase N terminus FY140_22795 PF13755 Sensor N-terminal transmembrane domain FY140_22795 PF13756 Stimulus-sensing domain FY140_22795 PF00672 HAMP domain FY140_22795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_22795 PF00512 His Kinase A (phospho-acceptor) domain FY140_22800 PF00072 Response regulator receiver domain FY140_22800 PF00486 Transcriptional regulatory protein, C terminal FY140_22805 PF01293 Phosphoenolpyruvate carboxykinase FY140_22810 PF00472 RF-1 domain FY140_22815 PF01476 LysM domain FY140_22815 PF04972 BON domain FY140_22820 PF00485 Phosphoribulokinase / Uridine kinase family FY140_22825 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY140_22830 PF00977 Histidine biosynthesis protein FY140_22835 PF00977 Histidine biosynthesis protein FY140_22840 PF00117 Glutamine amidotransferase class-I FY140_22850 PF00475 Imidazoleglycerol-phosphate dehydratase FY140_22855 PF00227 Proteasome subunit FY140_22860 PF00004 ATPase family associated with various cellular activities (AAA) FY140_22860 PF07724 AAA domain (Cdc48 subfamily) FY140_22860 PF10431 C-terminal, D2-small domain, of ClpB protein FY140_22870 PF01274 Malate synthase FY140_22885 PF00072 Response regulator receiver domain FY140_22890 PF00512 His Kinase A (phospho-acceptor) domain FY140_22890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_22895 PF00270 DEAD/DEAH box helicase FY140_22895 PF04408 Helicase associated domain (HA2) FY140_22895 PF00271 Helicase conserved C-terminal domain FY140_22895 PF08482 ATP-dependent helicase C-terminal FY140_22930 PF00270 DEAD/DEAH box helicase FY140_22930 PF00271 Helicase conserved C-terminal domain FY140_22930 PF00570 HRDC domain FY140_22930 PF16124 RecQ zinc-binding FY140_22930 PF09382 RQC domain FY140_22935 PF00480 ROK family FY140_22940 PF13407 Periplasmic binding protein domain FY140_22945 PF02653 Branched-chain amino acid transport system / permease component FY140_22950 PF00005 ABC transporter FY140_22955 PF00485 Phosphoribulokinase / Uridine kinase family FY140_22960 PF00462 Glutaredoxin FY140_22965 PF07972 NrdI Flavodoxin like FY140_22970 PF02867 Ribonucleotide reductase, barrel domain FY140_22970 PF00317 Ribonucleotide reductase, all-alpha domain FY140_22970 PF08343 Ribonucleotide reductase N-terminal FY140_22975 PF00268 Ribonucleotide reductase, small chain FY140_22985 PF02463 RecF/RecN/SMC N terminal domain FY140_22990 PF00581 Rhodanese-like domain FY140_22990 PF00899 ThiF family FY140_23000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY140_23000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY140_23010 PF00294 pfkB family carbohydrate kinase FY140_23020 PF05175 Methyltransferase small domain FY140_23020 PF08468 Methyltransferase small domain N-terminal FY140_23025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY140_23025 PF00575 S1 RNA binding domain FY140_23025 PF03725 3' exoribonuclease family, domain 2 FY140_23025 PF00013 KH domain FY140_23025 PF01138 3' exoribonuclease family, domain 1 FY140_23030 PF00312 Ribosomal protein S15 FY140_23035 PF09157 Pseudouridine synthase II TruB, C-terminal FY140_23035 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY140_23035 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY140_23040 PF02033 Ribosome-binding factor A FY140_23045 PF04760 Translation initiation factor IF-2, N-terminal region FY140_23045 PF11987 Translation-initiation factor 2 FY140_23045 PF00009 Elongation factor Tu GTP binding domain FY140_23045 PF03144 Elongation factor Tu domain 2 FY140_23045 PF08364 Bacterial translation initiation factor IF-2 associated region FY140_23055 PF00575 S1 RNA binding domain FY140_23055 PF08529 NusA N-terminal domain FY140_23055 PF13184 NusA-like KH domain FY140_23060 PF17384 RimP C-terminal SH3 domain FY140_23060 PF02576 RimP N-terminal domain FY140_23065 PF05977 Transmembrane secretion effector FY140_23070 PF13406 Transglycosylase SLT domain FY140_23075 PF02132 RecR protein FY140_23075 PF13662 Toprim domain FY140_23085 PF02575 YbaB/EbfC DNA-binding family FY140_23090 PF12169 DNA polymerase III subunits gamma and tau domain III FY140_23090 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY140_23090 PF12170 DNA polymerase III tau subunit V interacting with alpha FY140_23105 PF00293 NUDIX domain FY140_23105 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY140_23105 PF09297 NADH pyrophosphatase zinc ribbon domain FY140_23110 PF01817 Chorismate mutase type II FY140_23110 PF00800 Prephenate dehydratase FY140_23115 PF02348 Cytidylyltransferase FY140_23120 PF00034 Cytochrome c FY140_23125 PF02397 Bacterial sugar transferase FY140_23130 PF00912 Transglycosylase FY140_23130 PF00905 Penicillin binding protein transpeptidase domain FY140_23135 PF04073 Aminoacyl-tRNA editing domain FY140_23140 PF00313 'Cold-shock' DNA-binding domain FY140_23145 PF01546 Peptidase family M20/M25/M40 FY140_23145 PF07687 Peptidase dimerisation domain FY140_23150 PF01047 MarR family FY140_23155 PF01367 5'-3' exonuclease, C-terminal SAM fold FY140_23155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY140_23155 PF00476 DNA polymerase family A FY140_23155 PF01612 3'-5' exonuclease FY140_23165 PF01783 Ribosomal L32p protein family FY140_23170 PF02743 Cache domain FY140_23170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_23170 PF00512 His Kinase A (phospho-acceptor) domain FY140_23175 PF00158 Sigma-54 interaction domain FY140_23175 PF02954 Bacterial regulatory protein, Fis family FY140_23175 PF00072 Response regulator receiver domain FY140_23180 PF03401 Tripartite tricarboxylate transporter family receptor FY140_23185 PF07331 Tripartite tricarboxylate transporter TctB family FY140_23190 PF01970 Tripartite tricarboxylate transporter TctA family FY140_23195 PF04102 SlyX FY140_23205 PF00226 DnaJ domain FY140_23205 PF01556 DnaJ C terminal domain FY140_23205 PF00684 DnaJ central domain FY140_23210 PF00012 Hsp70 protein FY140_23225 PF01625 Peptide methionine sulfoxide reductase FY140_23230 PF02608 ABC transporter substrate-binding protein PnrA-like FY140_23235 PF00005 ABC transporter FY140_23240 PF02653 Branched-chain amino acid transport system / permease component FY140_23245 PF02653 Branched-chain amino acid transport system / permease component FY140_23250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY140_23255 PF01048 Phosphorylase superfamily FY140_23260 PF01791 DeoC/LacD family aldolase FY140_23265 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY140_23265 PF00591 Glycosyl transferase family, a/b domain FY140_23265 PF02885 Glycosyl transferase family, helical bundle domain FY140_23280 PF00962 Adenosine/AMP deaminase FY140_23285 PF01676 Metalloenzyme superfamily FY140_23295 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY140_23300 PF00510 Cytochrome c oxidase subunit III FY140_23305 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY140_23310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY140_23310 PF06481 COX Aromatic Rich Motif FY140_23315 PF07690 Major Facilitator Superfamily FY140_23315 PF00083 Sugar (and other) transporter FY140_23320 PF00310 Glutamine amidotransferases class-II FY140_23320 PF04898 Glutamate synthase central domain FY140_23320 PF01645 Conserved region in glutamate synthase FY140_23320 PF01493 GXGXG motif FY140_23325 PF00667 FAD binding domain FY140_23325 PF00258 Flavodoxin FY140_23325 PF00175 Oxidoreductase NAD-binding domain FY140_23345 PF02801 Beta-ketoacyl synthase, C-terminal domain FY140_23345 PF00109 Beta-ketoacyl synthase, N-terminal domain FY140_23350 PF07977 FabA-like domain FY140_23360 PF03458 UPF0126 domain FY140_23370 PF06912 Protein of unknown function (DUF1275) FY140_23380 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23385 PF00005 ABC transporter FY140_23390 PF00392 Bacterial regulatory proteins, gntR family FY140_23390 PF07702 UTRA domain FY140_23395 PF01618 MotA/TolQ/ExbB proton channel family FY140_23400 PF02472 Biopolymer transport protein ExbD/TolR FY140_23410 PF02615 Malate/L-lactate dehydrogenase FY140_23425 PF00625 Guanylate kinase FY140_23430 PF07969 Amidohydrolase family FY140_23435 PF06299 Protein of unknown function (DUF1045) FY140_23440 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23445 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23455 PF00005 ABC transporter FY140_23465 PF00005 ABC transporter FY140_23470 PF00005 ABC transporter FY140_23475 PF06007 Phosphonate metabolism protein PhnJ FY140_23480 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY140_23485 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY140_23490 PF06754 Phosphonate metabolism protein PhnG FY140_23495 PF07702 UTRA domain FY140_23495 PF00392 Bacterial regulatory proteins, gntR family FY140_23500 PF01113 Dihydrodipicolinate reductase, N-terminus FY140_23500 PF05173 Dihydrodipicolinate reductase, C-terminus FY140_23505 PF02685 Glucokinase FY140_23510 PF02142 MGS-like domain FY140_23515 PF03411 Penicillin-insensitive murein endopeptidase FY140_23520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY140_23525 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23530 PF12911 N-terminal TM domain of oligopeptide transport permease C FY140_23530 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY140_23535 PF00005 ABC transporter FY140_23540 PF01266 FAD dependent oxidoreductase FY140_23545 PF00120 Glutamine synthetase, catalytic domain FY140_23550 PF01266 FAD dependent oxidoreductase FY140_23560 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23565 PF00005 ABC transporter FY140_23570 PF00528 Binding-protein-dependent transport system inner membrane component FY140_23575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY140_23585 PF02082 Transcriptional regulator FY140_23590 PF13416 Bacterial extracellular solute-binding protein FY140_23600 PF05987 Bacterial protein of unknown function (DUF898) FY140_23605 PF00171 Aldehyde dehydrogenase family FY140_23610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_23610 PF03466 LysR substrate binding domain FY140_23615 PF00892 EamA-like transporter family FY140_23630 PF00877 NlpC/P60 family FY140_23640 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY140_23640 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY140_23645 PF00883 Cytosol aminopeptidase family, catalytic domain FY140_23645 PF02789 Cytosol aminopeptidase family, N-terminal domain FY140_23665 PF00437 Type II/IV secretion system protein FY140_23680 PF04972 BON domain FY140_23680 PF00263 Bacterial type II and III secretion system protein FY140_23680 PF13629 Pilus formation protein N terminal region FY140_23720 PF00117 Glutamine amidotransferase class-I FY140_23725 PF07411 Domain of unknown function (DUF1508) FY140_23730 PF01183 Glycosyl hydrolases family 25 FY140_23735 PF00892 EamA-like transporter family FY140_23740 PF00155 Aminotransferase class I and II FY140_23740 PF00392 Bacterial regulatory proteins, gntR family FY140_23765 PF06421 GTP-binding protein LepA C-terminus FY140_23765 PF00009 Elongation factor Tu GTP binding domain FY140_23765 PF03144 Elongation factor Tu domain 2 FY140_23765 PF00679 Elongation factor G C-terminus FY140_23770 PF00795 Carbon-nitrogen hydrolase FY140_23800 PF12833 Helix-turn-helix domain FY140_23800 PF02311 AraC-like ligand binding domain FY140_23805 PF03480 Bacterial extracellular solute-binding protein, family 7 FY140_23830 PF05198 Translation initiation factor IF-3, N-terminal domain FY140_23830 PF00707 Translation initiation factor IF-3, C-terminal domain FY140_23835 PF01632 Ribosomal protein L35 FY140_23840 PF00453 Ribosomal protein L20 FY140_23850 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY140_23850 PF01409 tRNA synthetases class II core domain (F) FY140_23855 PF01588 Putative tRNA binding domain FY140_23855 PF03147 Ferredoxin-fold anticodon binding domain FY140_23855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY140_23855 PF03483 B3/4 domain FY140_23855 PF03484 tRNA synthetase B5 domain FY140_23860 PF00248 Aldo/keto reductase family FY140_23865 PF03466 LysR substrate binding domain FY140_23865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_23875 PF00248 Aldo/keto reductase family FY140_23880 PF01965 DJ-1/PfpI family FY140_23880 PF12833 Helix-turn-helix domain FY140_23890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY140_23890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY140_23905 PF02601 Exonuclease VII, large subunit FY140_23905 PF13742 OB-fold nucleic acid binding domain FY140_23910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_23910 PF13378 Enolase C-terminal domain-like FY140_23915 PF00392 Bacterial regulatory proteins, gntR family FY140_23915 PF07729 FCD domain FY140_23920 PF01047 MarR family FY140_23925 PF00892 EamA-like transporter family FY140_23930 PF02073 Thermophilic metalloprotease (M29) FY140_23935 PF04073 Aminoacyl-tRNA editing domain FY140_23940 PF03960 ArsC family FY140_23955 PF00440 Bacterial regulatory proteins, tetR family FY140_23965 PF00117 Glutamine amidotransferase class-I FY140_23965 PF00958 GMP synthase C terminal domain FY140_23980 PF03073 TspO/MBR family FY140_24005 PF01029 NusB family FY140_24005 PF01189 16S rRNA methyltransferase RsmB/F FY140_24010 PF03330 Lytic transglycolase FY140_24020 PF08331 Domain of unknown function (DUF1730) FY140_24025 PF13417 Glutathione S-transferase, N-terminal domain FY140_24025 PF00043 Glutathione S-transferase, C-terminal domain FY140_24030 PF02673 Bacitracin resistance protein BacA FY140_24045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY140_24055 PF00398 Ribosomal RNA adenine dimethylase FY140_24060 PF00712 DNA polymerase III beta subunit, N-terminal domain FY140_24060 PF02767 DNA polymerase III beta subunit, central domain FY140_24060 PF02768 DNA polymerase III beta subunit, C-terminal domain FY140_24065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY140_24070 PF02021 Uncharacterised protein family UPF0102 FY140_24075 PF14602 Hexapeptide repeat of succinyl-transferase FY140_24075 PF12464 Maltose acetyltransferase FY140_24080 PF13416 Bacterial extracellular solute-binding protein FY140_24085 PF00528 Binding-protein-dependent transport system inner membrane component FY140_24090 PF00528 Binding-protein-dependent transport system inner membrane component FY140_24095 PF00005 ABC transporter FY140_24105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY140_24105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY140_24110 PF01078 Magnesium chelatase, subunit ChlI FY140_24110 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY140_24115 PF00291 Pyridoxal-phosphate dependent enzyme FY140_24120 PF01810 LysE type translocator FY140_24125 PF00692 dUTPase FY140_24130 PF16658 Class II release factor RF3, C-terminal domain FY140_24130 PF00009 Elongation factor Tu GTP binding domain FY140_24130 PF03144 Elongation factor Tu domain 2 FY140_24135 PF04127 DNA / pantothenate metabolism flavoprotein FY140_24135 PF02441 Flavoprotein FY140_24150 PF03109 ABC1 family FY140_24155 PF01209 ubiE/COQ5 methyltransferase family FY140_24160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY140_24160 PF06827 Zinc finger found in FPG and IleRS FY140_24160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY140_24165 PF00378 Enoyl-CoA hydratase/isomerase FY140_24170 PF01649 Ribosomal protein S20 FY140_24180 PF07506 RepB plasmid partitioning protein FY140_24180 PF02195 ParB-like nuclease domain FY140_24185 PF03428 Replication protein C N-terminal domain FY140_24185 PF11800 Replication protein C C-terminal region FY140_24215 PF00230 Major intrinsic protein FY140_24220 PF03960 ArsC family FY140_24225 PF03358 NADPH-dependent FMN reductase FY140_24245 PF11972 HTH DNA binding domain FY140_24245 PF07756 Protein of unknown function (DUF1612) FY140_24255 PF00665 Integrase core domain FY140_24260 PF01695 IstB-like ATP binding protein FY140_24270 PF12728 Helix-turn-helix domain FY140_24270 PF02661 Fic/DOC family FY140_24280 PF00313 'Cold-shock' DNA-binding domain FY140_24330 PF07690 Major Facilitator Superfamily FY140_24340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY140_24340 PF00672 HAMP domain FY140_24350 PF01266 FAD dependent oxidoreductase FY140_24350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY140_24355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY140_24355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY140_24365 PF00528 Binding-protein-dependent transport system inner membrane component FY140_24370 PF00528 Binding-protein-dependent transport system inner membrane component FY140_24375 PF00005 ABC transporter FY140_24375 PF08402 TOBE domain FY140_24385 PF04198 Putative sugar-binding domain FY140_24395 PF13545 Crp-like helix-turn-helix domain FY140_24395 PF00027 Cyclic nucleotide-binding domain FY140_24400 PF00072 Response regulator receiver domain FY140_24400 PF00196 Bacterial regulatory proteins, luxR family FY140_24405 PF00512 His Kinase A (phospho-acceptor) domain FY140_24405 PF00989 PAS fold FY140_24405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_24430 PF03466 LysR substrate binding domain FY140_24430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY140_24435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY140_24435 PF13378 Enolase C-terminal domain-like FY140_24440 PF00356 Bacterial regulatory proteins, lacI family FY140_24445 PF03401 Tripartite tricarboxylate transporter family receptor FY140_24450 PF07331 Tripartite tricarboxylate transporter TctB family FY140_24455 PF01970 Tripartite tricarboxylate transporter TctA family FY140_24470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY140_24470 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY140_24505 PF04717 Type VI secretion system, phage-baseplate injector FY140_24505 PF06715 Gp5 C-terminal repeat (3 copies) FY140_24535 PF02661 Fic/DOC family FY140_24535 PF12728 Helix-turn-helix domain FY140_24540 PF13533 Biotin-lipoyl like FY140_24555 PF12833 Helix-turn-helix domain FY140_24555 PF02311 AraC-like ligand binding domain FY140_24565 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY140_24565 PF00111 2Fe-2S iron-sulfur cluster binding domain FY140_24565 PF01799 [2Fe-2S] binding domain FY140_24570 PF03450 CO dehydrogenase flavoprotein C-terminal domain FY140_24570 PF00941 FAD binding domain in molybdopterin dehydrogenase FY140_24575 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY140_24575 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY140_24580 PF13478 XdhC Rossmann domain FY140_24580 PF02625 XdhC and CoxI family FY140_24585 PF12804 MobA-like NTP transferase domain FY140_24585 PF00132 Bacterial transferase hexapeptide (six repeats) FY140_24590 PF00011 Hsp20/alpha crystallin family FY140_24605 PF00881 Nitroreductase family FY140_24615 PF01810 LysE type translocator FY140_24630 PF00196 Bacterial regulatory proteins, luxR family FY140_24630 PF00072 Response regulator receiver domain FY140_24635 PF00672 HAMP domain FY140_24635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_24635 PF07730 Histidine kinase FY140_24645 PF00990 Diguanylate cyclase, GGDEF domain FY140_24645 PF13188 PAS domain FY140_24645 PF00563 EAL domain FY140_24645 PF03707 Bacterial signalling protein N terminal repeat FY140_24660 PF03707 Bacterial signalling protein N terminal repeat FY140_24660 PF00990 Diguanylate cyclase, GGDEF domain FY140_24660 PF00563 EAL domain FY140_24675 PF01494 FAD binding domain FY140_24680 PF07690 Major Facilitator Superfamily FY140_24700 PF00989 PAS fold FY140_24700 PF00512 His Kinase A (phospho-acceptor) domain FY140_24700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY140_24720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY140_24720 PF00205 Thiamine pyrophosphate enzyme, central domain FY140_24720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY140_24735 PF00440 Bacterial regulatory proteins, tetR family FY140_24735 PF17932 Tetracyclin repressor-like, C-terminal domain FY140_24740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY140_24740 PF00529 HlyD membrane-fusion protein of T1SS FY140_24745 PF00873 AcrB/AcrD/AcrF family FY140_24750 PF02321 Outer membrane efflux protein FY140_24755 PF07690 Major Facilitator Superfamily FY140_24800 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY140_24805 PF05101 Type IV secretory pathway, VirB3-like protein FY140_24810 PF04956 TrbC/VIRB2 family FY140_24815 PF00437 Type II/IV secretion system protein FY140_24820 PF00765 Autoinducer synthase