locus-tag class description FY141_00005 PF00308 Bacterial dnaA protein FY141_00005 PF08299 Bacterial dnaA protein helix-turn-helix FY141_00005 PF11638 DnaA N-terminal domain FY141_00010 PF06969 HemN C-terminal domain FY141_00010 PF04055 Radical SAM superfamily FY141_00015 PF01725 Ham1 family FY141_00020 PF01138 3' exoribonuclease family, domain 1 FY141_00020 PF03725 3' exoribonuclease family, domain 2 FY141_00025 PF01628 HrcA protein C terminal domain FY141_00030 PF01025 GrpE FY141_00035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FY141_00040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FY141_00040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FY141_00045 PF04552 Sigma-54, DNA binding domain FY141_00045 PF00309 Sigma-54 factor, Activator interacting domain (AID) FY141_00045 PF04963 Sigma-54 factor, core binding domain FY141_00050 PF00005 ABC transporter FY141_00055 PF03968 OstA-like protein FY141_00065 PF01343 Peptidase family S49 FY141_00070 PF00216 Bacterial DNA-binding protein FY141_00080 PF10672 S-adenosylmethionine-dependent methyltransferase FY141_00080 PF17785 PUA-like domain FY141_00085 PF00588 SpoU rRNA Methylase family FY141_00085 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY141_00090 PF01252 Signal peptidase (SPase) II FY141_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY141_00095 PF01627 Hpt domain FY141_00095 PF00072 Response regulator receiver domain FY141_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_00095 PF00512 His Kinase A (phospho-acceptor) domain FY141_00095 PF00672 HAMP domain FY141_00105 PF01624 MutS domain I FY141_00105 PF05188 MutS domain II FY141_00105 PF05192 MutS domain III FY141_00105 PF05190 MutS family domain IV FY141_00105 PF00488 MutS domain V FY141_00110 PF01842 ACT domain FY141_00110 PF08335 GlnD PII-uridylyltransferase FY141_00110 PF01966 HD domain FY141_00110 PF01909 Nucleotidyltransferase domain FY141_00115 PF03023 Lipid II flippase MurJ FY141_00125 PF00579 tRNA synthetases class I (W and Y) FY141_00135 PF01106 NifU-like domain FY141_00140 PF00814 Glycoprotease family FY141_00150 PF01475 Ferric uptake regulator family FY141_00155 PF01553 Acyltransferase FY141_00160 PF04055 Radical SAM superfamily FY141_00160 PF01938 TRAM domain FY141_00160 PF00919 Uncharacterized protein family UPF0004 FY141_00165 PF02562 PhoH-like protein FY141_00170 PF02130 Uncharacterized protein family UPF0054 FY141_00175 PF00571 CBS domain FY141_00175 PF03471 Transporter associated domain FY141_00180 PF00795 Carbon-nitrogen hydrolase FY141_00185 PF01381 Helix-turn-helix FY141_00190 PF02773 S-adenosylmethionine synthetase, C-terminal domain FY141_00190 PF02772 S-adenosylmethionine synthetase, central domain FY141_00190 PF00438 S-adenosylmethionine synthetase, N-terminal domain FY141_00195 PF02390 Putative methyltransferase FY141_00200 PF00294 pfkB family carbohydrate kinase FY141_00205 PF02646 RmuC family FY141_00210 PF01327 Polypeptide deformylase FY141_00215 PF02911 Formyl transferase, C-terminal domain FY141_00215 PF00551 Formyl transferase FY141_00220 PF01416 tRNA pseudouridine synthase FY141_00230 PF07687 Peptidase dimerisation domain FY141_00230 PF01546 Peptidase family M20/M25/M40 FY141_00235 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_00235 PF14602 Hexapeptide repeat of succinyl-transferase FY141_00235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FY141_00245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_00245 PF00672 HAMP domain FY141_00250 PF01156 Inosine-uridine preferring nucleoside hydrolase FY141_00255 PF00011 Hsp20/alpha crystallin family FY141_00280 PF00696 Amino acid kinase family FY141_00290 PF01926 50S ribosome-binding GTPase FY141_00295 PF14849 YidC periplasmic domain FY141_00295 PF02096 60Kd inner membrane protein FY141_00300 PF00825 Ribonuclease P FY141_00305 PF00468 Ribosomal protein L34 FY141_00310 PF00672 HAMP domain FY141_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_00315 PF00512 His Kinase A (phospho-acceptor) domain FY141_00315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_00325 PF01209 ubiE/COQ5 methyltransferase family FY141_00330 PF00005 ABC transporter FY141_00335 PF00528 Binding-protein-dependent transport system inner membrane component FY141_00340 PF00528 Binding-protein-dependent transport system inner membrane component FY141_00350 PF00149 Calcineurin-like phosphoesterase FY141_00355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FY141_00355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FY141_00365 PF05544 Proline racemase FY141_00370 PF01979 Amidohydrolase family FY141_00375 PF00156 Phosphoribosyl transferase domain FY141_00380 PF00294 pfkB family carbohydrate kinase FY141_00395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY141_00395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY141_00400 PF00342 Phosphoglucose isomerase FY141_00405 PF00501 AMP-binding enzyme FY141_00405 PF13193 AMP-binding enzyme C-terminal domain FY141_00410 PF00005 ABC transporter FY141_00410 PF08402 TOBE domain FY141_00420 PF00528 Binding-protein-dependent transport system inner membrane component FY141_00425 PF00593 TonB dependent receptor FY141_00425 PF07715 TonB-dependent Receptor Plug Domain FY141_00445 PF01679 Proteolipid membrane potential modulator FY141_00470 PF03976 Polyphosphate kinase 2 (PPK2) FY141_00475 PF00512 His Kinase A (phospho-acceptor) domain FY141_00475 PF16736 Single Cache-like FY141_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_00475 PF00989 PAS fold FY141_00480 PF12849 PBP superfamily domain FY141_00485 PF00528 Binding-protein-dependent transport system inner membrane component FY141_00490 PF00528 Binding-protein-dependent transport system inner membrane component FY141_00495 PF00005 ABC transporter FY141_00500 PF01895 PhoU domain FY141_00505 PF00072 Response regulator receiver domain FY141_00505 PF00486 Transcriptional regulatory protein, C terminal FY141_00515 PF00202 Aminotransferase class-III FY141_00520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY141_00520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY141_00525 PF01430 Hsp33 protein FY141_00530 PF04379 ApaG domain FY141_00535 PF01053 Cys/Met metabolism PLP-dependent enzyme FY141_00545 PF00692 dUTPase FY141_00605 PF10548 P22AR C-terminal domain FY141_00605 PF08346 AntA/AntB antirepressor FY141_00645 PF06689 ClpX C4-type zinc finger FY141_00645 PF10431 C-terminal, D2-small domain, of ClpB protein FY141_00645 PF07724 AAA domain (Cdc48 subfamily) FY141_00700 PF03592 Terminase small subunit FY141_00700 PF10668 Phage terminase small subunit FY141_00825 PF13356 Arm DNA-binding domain FY141_00825 PF00589 Phage integrase family FY141_00835 PF00239 Resolvase, N terminal domain FY141_00835 PF02796 Helix-turn-helix domain of resolvase FY141_00850 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system FY141_00870 PF08671 Anti-repressor SinI FY141_00870 PF01381 Helix-turn-helix FY141_00910 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FY141_00915 PF00230 Major intrinsic protein FY141_00955 PF00196 Bacterial regulatory proteins, luxR family FY141_00955 PF00072 Response regulator receiver domain FY141_00965 PF01180 Dihydroorotate dehydrogenase FY141_01000 PF02082 Transcriptional regulator FY141_01005 PF00270 DEAD/DEAH box helicase FY141_01005 PF08494 DEAD/H associated FY141_01005 PF00271 Helicase conserved C-terminal domain FY141_01025 PF01925 Sulfite exporter TauE/SafE FY141_01035 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_01035 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY141_01035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_01035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_01040 PF02803 Thiolase, C-terminal domain FY141_01040 PF00108 Thiolase, N-terminal domain FY141_01045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY141_01045 PF00378 Enoyl-CoA hydratase/isomerase FY141_01045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY141_01070 PF03334 Na+/H+ antiporter subunit FY141_01075 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY141_01080 PF01899 Na+/H+ ion antiporter subunit FY141_01085 PF00361 Proton-conducting membrane transporter FY141_01090 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY141_01095 PF00361 Proton-conducting membrane transporter FY141_01095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY141_01095 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY141_01095 PF13244 Domain of unknown function (DUF4040) FY141_01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_01115 PF00072 Response regulator receiver domain FY141_01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_01120 PF01584 CheW-like domain FY141_01120 PF02895 Signal transducing histidine kinase, homodimeric domain FY141_01120 PF01627 Hpt domain FY141_01125 PF01739 CheR methyltransferase, SAM binding domain FY141_01125 PF03705 CheR methyltransferase, all-alpha domain FY141_01130 PF00072 Response regulator receiver domain FY141_01130 PF01339 CheB methylesterase FY141_01135 PF00072 Response regulator receiver domain FY141_01140 PF03975 CheD chemotactic sensory transduction FY141_01150 PF08345 Flagellar M-ring protein C-terminal FY141_01150 PF01514 Secretory protein of YscJ/FliF family FY141_01155 PF00196 Bacterial regulatory proteins, luxR family FY141_01155 PF03472 Autoinducer binding domain FY141_01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_01165 PF00672 HAMP domain FY141_01170 PF00672 HAMP domain FY141_01170 PF00072 Response regulator receiver domain FY141_01170 PF01627 Hpt domain FY141_01170 PF00512 His Kinase A (phospho-acceptor) domain FY141_01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_01175 PF01741 Large-conductance mechanosensitive channel, MscL FY141_01180 PF00155 Aminotransferase class I and II FY141_01185 PF01370 NAD dependent epimerase/dehydratase family FY141_01195 PF03884 DNA gyrase inhibitor YacG FY141_01200 PF02545 Maf-like protein FY141_01205 PF01176 Translation initiation factor 1A / IF-1 FY141_01215 PF06793 Uncharacterised protein family (UPF0262) FY141_01220 PF00815 Histidinol dehydrogenase FY141_01230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY141_01245 PF00700 Bacterial flagellin C-terminal helical region FY141_01245 PF00669 Bacterial flagellin N-terminal helical region FY141_01250 PF00700 Bacterial flagellin C-terminal helical region FY141_01250 PF00669 Bacterial flagellin N-terminal helical region FY141_01255 PF00669 Bacterial flagellin N-terminal helical region FY141_01255 PF00700 Bacterial flagellin C-terminal helical region FY141_01260 PF00813 FliP family FY141_01270 PF02107 Flagellar L-ring protein FY141_01280 PF02119 Flagellar P-ring protein FY141_01285 PF13144 Chaperone for flagella basal body P-ring formation FY141_01290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY141_01290 PF00460 Flagella basal body rod protein FY141_01295 PF02049 Flagellar hook-basal body complex protein FliE FY141_01300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY141_01305 PF00460 Flagella basal body rod protein FY141_01315 PF18269 T3SS EscN ATPase C-terminal domain FY141_01315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY141_01320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY141_01320 PF00460 Flagella basal body rod protein FY141_01330 PF01618 MotA/TolQ/ExbB proton channel family FY141_01335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY141_01340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FY141_01345 PF14842 FliG N-terminal domain FY141_01345 PF14841 FliG middle domain FY141_01345 PF01706 FliG C-terminal domain FY141_01350 PF01312 FlhB HrpN YscU SpaS Family FY141_01360 PF00669 Bacterial flagellin N-terminal helical region FY141_01360 PF00700 Bacterial flagellin C-terminal helical region FY141_01370 PF13677 Membrane MotB of proton-channel complex MotA/MotB FY141_01370 PF00691 OmpA family FY141_01380 PF02120 Flagellar hook-length control protein FliK FY141_01390 PF00486 Transcriptional regulatory protein, C terminal FY141_01395 PF07559 Flagellar basal body protein FlaE FY141_01395 PF00460 Flagella basal body rod protein FY141_01395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FY141_01415 PF07378 Flagellar protein FlbT FY141_01420 PF03963 Flagellar hook capping protein - N-terminal region FY141_01425 PF01313 Bacterial export proteins, family 3 FY141_01430 PF00771 FHIPEP family FY141_01435 PF01311 Bacterial export proteins, family 1 FY141_01470 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FY141_01470 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FY141_01475 PF00356 Bacterial regulatory proteins, lacI family FY141_01480 PF01547 Bacterial extracellular solute-binding protein FY141_01485 PF00528 Binding-protein-dependent transport system inner membrane component FY141_01490 PF00528 Binding-protein-dependent transport system inner membrane component FY141_01495 PF00128 Alpha amylase, catalytic domain FY141_01500 PF00005 ABC transporter FY141_01500 PF17912 MalK OB fold domain FY141_01500 PF03459 TOBE domain FY141_01515 PF00920 Dehydratase family FY141_01520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FY141_01525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FY141_01525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FY141_01530 PF01266 FAD dependent oxidoreductase FY141_01535 PF00120 Glutamine synthetase, catalytic domain FY141_01560 PF00463 Isocitrate lyase family FY141_01565 PF09856 Predicted transcriptional regulator (DUF2083) FY141_01565 PF06114 IrrE N-terminal-like domain FY141_01565 PF01381 Helix-turn-helix FY141_01570 PF13416 Bacterial extracellular solute-binding protein FY141_01575 PF08402 TOBE domain FY141_01575 PF00005 ABC transporter FY141_01580 PF00528 Binding-protein-dependent transport system inner membrane component FY141_01585 PF00528 Binding-protein-dependent transport system inner membrane component FY141_01600 PF13426 PAS domain FY141_01600 PF13188 PAS domain FY141_01600 PF00989 PAS fold FY141_01600 PF00512 His Kinase A (phospho-acceptor) domain FY141_01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_01610 PF02541 Ppx/GppA phosphatase family FY141_01615 PF01728 FtsJ-like methyltransferase FY141_01620 PF07690 Major Facilitator Superfamily FY141_01625 PF00753 Metallo-beta-lactamase superfamily FY141_01630 PF00478 IMP dehydrogenase / GMP reductase domain FY141_01630 PF00571 CBS domain FY141_01640 PF00107 Zinc-binding dehydrogenase FY141_01640 PF08240 Alcohol dehydrogenase GroES-like domain FY141_01645 PF01738 Dienelactone hydrolase family FY141_01650 PF00994 Probable molybdopterin binding domain FY141_01655 PF08544 GHMP kinases C terminal FY141_01655 PF00288 GHMP kinases N terminal domain FY141_01665 PF00348 Polyprenyl synthetase FY141_01680 PF01343 Peptidase family S49 FY141_01680 PF06965 Na+/H+ antiporter 1 FY141_01690 PF02091 Glycyl-tRNA synthetase alpha subunit FY141_01700 PF04011 LemA family FY141_01705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FY141_01715 PF05746 DALR anticodon binding domain FY141_01715 PF02092 Glycyl-tRNA synthetase beta subunit FY141_01720 PF04463 Protein of unknown function (DUF523) FY141_01725 PF17200 Single Cache domain 2 FY141_01725 PF00672 HAMP domain FY141_01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_01735 PF02844 Phosphoribosylglycinamide synthetase, N domain FY141_01735 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FY141_01735 PF02843 Phosphoribosylglycinamide synthetase, C domain FY141_01740 PF16921 Tex protein YqgF-like domain FY141_01740 PF00575 S1 RNA binding domain FY141_01740 PF17674 HHH domain FY141_01740 PF09371 Tex-like protein N-terminal domain FY141_01755 PF01040 UbiA prenyltransferase family FY141_01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_01770 PF03466 LysR substrate binding domain FY141_01780 PF04107 Glutamate-cysteine ligase family 2(GCS2) FY141_01785 PF04452 RNA methyltransferase FY141_01790 PF01384 Phosphate transporter family FY141_01800 PF05116 Sucrose-6F-phosphate phosphohydrolase FY141_01805 PF13439 Glycosyltransferase Family 4 FY141_01805 PF00534 Glycosyl transferases group 1 FY141_01810 PF07729 FCD domain FY141_01810 PF00392 Bacterial regulatory proteins, gntR family FY141_01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_01820 PF03466 LysR substrate binding domain FY141_01825 PF01565 FAD binding domain FY141_01825 PF02913 FAD linked oxidases, C-terminal domain FY141_01830 PF02913 FAD linked oxidases, C-terminal domain FY141_01830 PF01565 FAD binding domain FY141_01835 PF13183 4Fe-4S dicluster domain FY141_01835 PF02754 Cysteine-rich domain FY141_01845 PF17969 L,D-transpeptidase C-terminal domain FY141_01845 PF03734 L,D-transpeptidase catalytic domain FY141_01850 PF03352 Methyladenine glycosylase FY141_01860 PF03601 Conserved hypothetical protein 698 FY141_01865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_01865 PF03466 LysR substrate binding domain FY141_01895 PF03129 Anticodon binding domain FY141_01895 PF13393 Histidyl-tRNA synthetase FY141_01905 PF13393 Histidyl-tRNA synthetase FY141_01910 PF01634 ATP phosphoribosyltransferase FY141_01915 PF07681 DoxX FY141_01925 PF00118 TCP-1/cpn60 chaperonin family FY141_01930 PF00166 Chaperonin 10 Kd subunit FY141_01940 PF06574 FAD synthetase FY141_01940 PF01687 Riboflavin kinase FY141_01945 PF08264 Anticodon-binding domain of tRNA FY141_01945 PF00133 tRNA synthetases class I (I, L, M and V) FY141_01955 PF14437 MafB19-like deaminase FY141_01960 PF00849 RNA pseudouridylate synthase FY141_01960 PF01479 S4 domain FY141_01970 PF01734 Patatin-like phospholipase FY141_01975 PF00999 Sodium/hydrogen exchanger family FY141_01975 PF02254 TrkA-N domain FY141_01980 PF01523 Putative modulator of DNA gyrase FY141_01985 PF00459 Inositol monophosphatase family FY141_01995 PF00534 Glycosyl transferases group 1 FY141_01995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FY141_02005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FY141_02015 PF01119 DNA mismatch repair protein, C-terminal domain FY141_02015 PF08676 MutL C terminal dimerisation domain FY141_02020 PF00486 Transcriptional regulatory protein, C terminal FY141_02020 PF00072 Response regulator receiver domain FY141_02025 PF13188 PAS domain FY141_02025 PF03707 Bacterial signalling protein N terminal repeat FY141_02025 PF00990 Diguanylate cyclase, GGDEF domain FY141_02025 PF00563 EAL domain FY141_02030 PF08450 SMP-30/Gluconolactonase/LRE-like region FY141_02035 PF01081 KDPG and KHG aldolase FY141_02040 PF05035 2-keto-3-deoxy-galactonokinase FY141_02050 PF09339 IclR helix-turn-helix domain FY141_02050 PF01614 Bacterial transcriptional regulator FY141_02055 PF03472 Autoinducer binding domain FY141_02055 PF00196 Bacterial regulatory proteins, luxR family FY141_02065 PF10609 NUBPL iron-transfer P-loop NTPase FY141_02070 PF01544 CorA-like Mg2+ transporter protein FY141_02075 PF02705 K+ potassium transporter FY141_02090 PF00119 ATP synthase A chain FY141_02095 PF00137 ATP synthase subunit C FY141_02100 PF00430 ATP synthase B/B' CF(0) FY141_02105 PF00430 ATP synthase B/B' CF(0) FY141_02110 PF09828 Chromate resistance exported protein FY141_02115 PF02417 Chromate transporter FY141_02120 PF01351 Ribonuclease HII FY141_02135 PF01565 FAD binding domain FY141_02135 PF02913 FAD linked oxidases, C-terminal domain FY141_02140 PF01300 Telomere recombination FY141_02140 PF03481 Putative GTP-binding controlling metal-binding FY141_02150 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY141_02150 PF00355 Rieske [2Fe-2S] domain FY141_02155 PF00175 Oxidoreductase NAD-binding domain FY141_02155 PF00111 2Fe-2S iron-sulfur cluster binding domain FY141_02155 PF00970 Oxidoreductase FAD-binding domain FY141_02160 PF07886 BA14K-like protein FY141_02165 PF07886 BA14K-like protein FY141_02175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_02175 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY141_02175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_02175 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_02190 PF05958 tRNA (Uracil-5-)-methyltransferase FY141_02195 PF01728 FtsJ-like methyltransferase FY141_02195 PF01479 S4 domain FY141_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_02200 PF02203 Tar ligand binding domain homologue FY141_02200 PF00672 HAMP domain FY141_02210 PF01037 Lrp/AsnC ligand binding domain FY141_02235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FY141_02235 PF02779 Transketolase, pyrimidine binding domain FY141_02235 PF02780 Transketolase, C-terminal domain FY141_02240 PF02678 Pirin FY141_02240 PF05726 Pirin C-terminal cupin domain FY141_02245 PF02609 Exonuclease VII small subunit FY141_02250 PF00850 Histone deacetylase domain FY141_02255 PF02632 BioY family FY141_02260 PF02361 Cobalt transport protein FY141_02265 PF00005 ABC transporter FY141_02270 PF06224 Winged helix DNA-binding domain FY141_02275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY141_02275 PF00925 GTP cyclohydrolase II FY141_02280 PF01264 Chorismate synthase FY141_02295 PF00300 Histidine phosphatase superfamily (branch 1) FY141_02305 PF00684 DnaJ central domain FY141_02305 PF00226 DnaJ domain FY141_02305 PF01556 DnaJ C terminal domain FY141_02315 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FY141_02315 PF01243 Pyridoxamine 5'-phosphate oxidase FY141_02335 PF13419 Haloacid dehalogenase-like hydrolase FY141_02345 PF01523 Putative modulator of DNA gyrase FY141_02355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY141_02355 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FY141_02360 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY141_02365 PF01040 UbiA prenyltransferase family FY141_02370 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FY141_02375 PF00510 Cytochrome c oxidase subunit III FY141_02385 PF02104 SURF1 family FY141_02390 PF02401 LytB protein FY141_02395 PF01636 Phosphotransferase enzyme family FY141_02400 PF00075 RNase H FY141_02410 PF00462 Glutaredoxin FY141_02410 PF08534 Redoxin FY141_02420 PF02622 Uncharacterized ACR, COG1678 FY141_02425 PF05532 CsbD-like FY141_02430 PF15887 Putative zinc-binding metallo-peptidase FY141_02430 PF10005 zinc-ribbon domain FY141_02435 PF03707 Bacterial signalling protein N terminal repeat FY141_02435 PF00990 Diguanylate cyclase, GGDEF domain FY141_02435 PF13188 PAS domain FY141_02435 PF00563 EAL domain FY141_02440 PF13302 Acetyltransferase (GNAT) domain FY141_02445 PF05193 Peptidase M16 inactive domain FY141_02445 PF00675 Insulinase (Peptidase family M16) FY141_02450 PF14821 Threonine synthase N terminus FY141_02450 PF00291 Pyridoxal-phosphate dependent enzyme FY141_02470 PF13419 Haloacid dehalogenase-like hydrolase FY141_02475 PF07729 FCD domain FY141_02475 PF00392 Bacterial regulatory proteins, gntR family FY141_02490 PF01555 DNA methylase FY141_02490 PF18755 Restriction Enzyme Adenine Methylase Associated FY141_02495 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FY141_02500 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FY141_02510 PF00730 HhH-GPD superfamily base excision DNA repair protein FY141_02510 PF14815 NUDIX domain FY141_02525 PF13462 Thioredoxin FY141_02530 PF02463 RecF/RecN/SMC N terminal domain FY141_02535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_02540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FY141_02540 PF02896 PEP-utilising enzyme, TIM barrel domain FY141_02540 PF00391 PEP-utilising enzyme, mobile domain FY141_02550 PF00375 Sodium:dicarboxylate symporter family FY141_02575 PF06039 Malate:quinone oxidoreductase (Mqo) FY141_02590 PF00009 Elongation factor Tu GTP binding domain FY141_02595 PF01507 Phosphoadenosine phosphosulfate reductase family FY141_02600 PF01507 Phosphoadenosine phosphosulfate reductase family FY141_02605 PF02082 Transcriptional regulator FY141_02615 PF00528 Binding-protein-dependent transport system inner membrane component FY141_02620 PF00528 Binding-protein-dependent transport system inner membrane component FY141_02625 PF00005 ABC transporter FY141_02625 PF12857 TOBE-like domain FY141_02630 PF00698 Acyl transferase domain FY141_02630 PF08240 Alcohol dehydrogenase GroES-like domain FY141_02630 PF16197 Ketoacyl-synthetase C-terminal extension FY141_02630 PF00109 Beta-ketoacyl synthase, N-terminal domain FY141_02630 PF02801 Beta-ketoacyl synthase, C-terminal domain FY141_02630 PF08659 KR domain FY141_02630 PF00550 Phosphopantetheine attachment site FY141_02630 PF14765 Polyketide synthase dehydratase FY141_02630 PF00107 Zinc-binding dehydrogenase FY141_02635 PF00563 EAL domain FY141_02635 PF01590 GAF domain FY141_02635 PF00990 Diguanylate cyclase, GGDEF domain FY141_02635 PF00989 PAS fold FY141_02645 PF13977 BetI-type transcriptional repressor, C-terminal FY141_02645 PF00440 Bacterial regulatory proteins, tetR family FY141_02650 PF00171 Aldehyde dehydrogenase family FY141_02655 PF05199 GMC oxidoreductase FY141_02655 PF00732 GMC oxidoreductase FY141_02685 PF00043 Glutathione S-transferase, C-terminal domain FY141_02685 PF02798 Glutathione S-transferase, N-terminal domain FY141_02695 PF07690 Major Facilitator Superfamily FY141_02705 PF05973 Phage derived protein Gp49-like (DUF891) FY141_02715 PF04679 ATP dependent DNA ligase C terminal region FY141_02715 PF01068 ATP dependent DNA ligase domain FY141_02715 PF04675 DNA ligase N terminus FY141_02725 PF04488 Glycosyltransferase sugar-binding region containing DXD motif FY141_02730 PF00403 Heavy-metal-associated domain FY141_02735 PF03734 L,D-transpeptidase catalytic domain FY141_02735 PF17969 L,D-transpeptidase C-terminal domain FY141_02740 PF03734 L,D-transpeptidase catalytic domain FY141_02740 PF17969 L,D-transpeptidase C-terminal domain FY141_02745 PF01047 MarR family FY141_02750 PF02566 OsmC-like protein FY141_02765 PF00005 ABC transporter FY141_02765 PF12848 ABC transporter FY141_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_02795 PF03466 LysR substrate binding domain FY141_02800 PF00106 short chain dehydrogenase FY141_02815 PF05872 Bacterial protein of unknown function (DUF853) FY141_02825 PF01638 HxlR-like helix-turn-helix FY141_02830 PF00106 short chain dehydrogenase FY141_02835 PF12833 Helix-turn-helix domain FY141_02845 PF00248 Aldo/keto reductase family FY141_02850 PF01062 Bestrophin, RFP-TM, chloride channel FY141_02855 PF13280 WYL domain FY141_02855 PF08279 HTH domain FY141_02870 PF01063 Amino-transferase class IV FY141_02875 PF00672 HAMP domain FY141_02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_02880 PF03466 LysR substrate binding domain FY141_02895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY141_02895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY141_02910 PF01810 LysE type translocator FY141_02915 PF01322 Cytochrome C' FY141_02920 PF00034 Cytochrome c FY141_02950 PF00561 alpha/beta hydrolase fold FY141_02955 PF09278 MerR, DNA binding FY141_02955 PF00376 MerR family regulatory protein FY141_02965 PF02583 Metal-sensitive transcriptional repressor FY141_02980 PF00005 ABC transporter FY141_02980 PF00571 CBS domain FY141_02985 PF00528 Binding-protein-dependent transport system inner membrane component FY141_02995 PF00326 Prolyl oligopeptidase family FY141_02995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FY141_03005 PF00701 Dihydrodipicolinate synthetase family FY141_03015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY141_03015 PF12833 Helix-turn-helix domain FY141_03015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY141_03015 PF02805 Metal binding domain of Ada FY141_03020 PF01594 AI-2E family transporter FY141_03025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_03045 PF03006 Haemolysin-III related FY141_03055 PF01810 LysE type translocator FY141_03060 PF01641 SelR domain FY141_03065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY141_03065 PF13244 Domain of unknown function (DUF4040) FY141_03065 PF00361 Proton-conducting membrane transporter FY141_03070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FY141_03075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY141_03080 PF00361 Proton-conducting membrane transporter FY141_03085 PF01899 Na+/H+ ion antiporter subunit FY141_03090 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FY141_03095 PF03334 Na+/H+ antiporter subunit FY141_03100 PF05443 ROS/MUCR transcriptional regulator protein FY141_03115 PF02657 Fe-S metabolism associated domain FY141_03120 PF17264 Family of unknown function (DUF5330) FY141_03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_03125 PF00512 His Kinase A (phospho-acceptor) domain FY141_03160 PF01810 LysE type translocator FY141_03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_03165 PF03466 LysR substrate binding domain FY141_03170 PF00912 Transglycosylase FY141_03170 PF00905 Penicillin binding protein transpeptidase domain FY141_03175 PF03692 Putative zinc- or iron-chelating domain FY141_03180 PF00905 Penicillin binding protein transpeptidase domain FY141_03190 PF00403 Heavy-metal-associated domain FY141_03195 PF00376 MerR family regulatory protein FY141_03195 PF09278 MerR, DNA binding FY141_03220 PF07690 Major Facilitator Superfamily FY141_03225 PF08244 Glycosyl hydrolases family 32 C terminal FY141_03225 PF00251 Glycosyl hydrolases family 32 N-terminal domain FY141_03230 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FY141_03240 PF01037 Lrp/AsnC ligand binding domain FY141_03240 PF13404 AsnC-type helix-turn-helix domain FY141_03280 PF04860 Phage portal protein FY141_03370 PF00072 Response regulator receiver domain FY141_03370 PF00486 Transcriptional regulatory protein, C terminal FY141_03375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_03390 PF03100 CcmE FY141_03395 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FY141_03395 PF01578 Cytochrome C assembly protein FY141_03400 PF03918 Cytochrome C biogenesis protein FY141_03405 PF13180 PDZ domain FY141_03410 PF00072 Response regulator receiver domain FY141_03410 PF00486 Transcriptional regulatory protein, C terminal FY141_03415 PF00672 HAMP domain FY141_03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_03415 PF00512 His Kinase A (phospho-acceptor) domain FY141_03420 PF04134 Protein of unknown function, DUF393 FY141_03425 PF06629 MltA-interacting protein MipA FY141_03430 PF08335 GlnD PII-uridylyltransferase FY141_03430 PF03710 Glutamate-ammonia ligase adenylyltransferase FY141_03435 PF00512 His Kinase A (phospho-acceptor) domain FY141_03435 PF00989 PAS fold FY141_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_03445 PF11940 Domain of unknown function (DUF3458) Ig-like fold FY141_03445 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FY141_03445 PF01433 Peptidase family M1 domain FY141_03450 PF00892 EamA-like transporter family FY141_03465 PF00012 Hsp70 protein FY141_03470 PF00990 Diguanylate cyclase, GGDEF domain FY141_03500 PF08240 Alcohol dehydrogenase GroES-like domain FY141_03500 PF00107 Zinc-binding dehydrogenase FY141_03505 PF01638 HxlR-like helix-turn-helix FY141_03510 PF02673 Bacitracin resistance protein BacA FY141_03515 PF01769 Divalent cation transporter FY141_03515 PF00571 CBS domain FY141_03515 PF03448 MgtE intracellular N domain FY141_03520 PF07690 Major Facilitator Superfamily FY141_03525 PF00781 Diacylglycerol kinase catalytic domain FY141_03530 PF00202 Aminotransferase class-III FY141_03545 PF01048 Phosphorylase superfamily FY141_03545 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FY141_03570 PF00155 Aminotransferase class I and II FY141_03580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_03580 PF14759 Reductase C-terminal FY141_03585 PF03328 HpcH/HpaI aldolase/citrate lyase family FY141_03600 PF02530 Porin subfamily FY141_03605 PF02530 Porin subfamily FY141_03610 PF01464 Transglycosylase SLT domain FY141_03610 PF14718 Soluble lytic murein transglycosylase L domain FY141_03615 PF00701 Dihydrodipicolinate synthetase family FY141_03620 PF01668 SmpB protein FY141_03625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_03635 PF01192 RNA polymerase Rpb6 FY141_03640 PF13291 ACT domain FY141_03640 PF04607 Region found in RelA / SpoT proteins FY141_03640 PF02824 TGS domain FY141_03655 PF01648 4'-phosphopantetheinyl transferase superfamily FY141_03660 PF10502 Signal peptidase, peptidase S26 FY141_03665 PF00035 Double-stranded RNA binding motif FY141_03665 PF14622 Ribonuclease-III-like FY141_03670 PF07650 KH domain FY141_03670 PF01926 50S ribosome-binding GTPase FY141_03680 PF00072 Response regulator receiver domain FY141_03685 PF02565 Recombination protein O C terminal FY141_03685 PF11967 Recombination protein O N terminal FY141_03690 PF07690 Major Facilitator Superfamily FY141_03695 PF08241 Methyltransferase domain FY141_03705 PF01966 HD domain FY141_03715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_03725 PF00005 ABC transporter FY141_03730 PF00528 Binding-protein-dependent transport system inner membrane component FY141_03735 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY141_03740 PF05552 Conserved TM helix FY141_03740 PF00924 Mechanosensitive ion channel FY141_03750 PF01966 HD domain FY141_03755 PF01571 Aminomethyltransferase folate-binding domain FY141_03775 PF00293 NUDIX domain FY141_03780 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FY141_03790 PF00072 Response regulator receiver domain FY141_03790 PF00990 Diguanylate cyclase, GGDEF domain FY141_03795 PF01066 CDP-alcohol phosphatidyltransferase FY141_03800 PF02666 Phosphatidylserine decarboxylase FY141_03805 PF00005 ABC transporter FY141_03805 PF00664 ABC transporter transmembrane region FY141_03815 PF03641 Possible lysine decarboxylase FY141_03820 PF03717 Penicillin-binding Protein dimerisation domain FY141_03820 PF00905 Penicillin binding protein transpeptidase domain FY141_03825 PF00892 EamA-like transporter family FY141_03830 PF00561 alpha/beta hydrolase fold FY141_03845 PF04480 Protein of unknown function (DUF559) FY141_03850 PF01406 tRNA synthetases class I (C) catalytic domain FY141_03850 PF09190 DALR domain FY141_03855 PF00106 short chain dehydrogenase FY141_03860 PF00156 Phosphoribosyl transferase domain FY141_03860 PF13537 Glutamine amidotransferase domain FY141_03865 PF02674 Colicin V production protein FY141_03870 PF18073 Rubredoxin metal binding domain FY141_03870 PF06745 KaiC FY141_03880 PF01168 Alanine racemase, N-terminal domain FY141_03880 PF00842 Alanine racemase, C-terminal domain FY141_03885 PF12852 Cupin FY141_03885 PF12833 Helix-turn-helix domain FY141_03890 PF03591 AzlC protein FY141_03900 PF03796 DnaB-like helicase C terminal domain FY141_03900 PF00772 DnaB-like helicase N terminal domain FY141_03915 PF13533 Biotin-lipoyl like FY141_03920 PF01281 Ribosomal protein L9, N-terminal domain FY141_03920 PF03948 Ribosomal protein L9, C-terminal domain FY141_03930 PF01084 Ribosomal protein S18 FY141_03935 PF01250 Ribosomal protein S6 FY141_03945 PF00248 Aldo/keto reductase family FY141_03950 PF00698 Acyl transferase domain FY141_03960 PF00550 Phosphopantetheine attachment site FY141_03965 PF00109 Beta-ketoacyl synthase, N-terminal domain FY141_03965 PF02801 Beta-ketoacyl synthase, C-terminal domain FY141_03975 PF02618 YceG-like family FY141_03980 PF08340 Domain of unknown function (DUF1732) FY141_03980 PF03755 YicC-like family, N-terminal region FY141_03985 PF00625 Guanylate kinase FY141_04000 PF00398 Ribosomal RNA adenine dimethylase FY141_04005 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY141_04015 PF03968 OstA-like protein FY141_04015 PF04453 LPS transport system D FY141_04030 PF02789 Cytosol aminopeptidase family, N-terminal domain FY141_04030 PF00883 Cytosol aminopeptidase family, catalytic domain FY141_04040 PF03707 Bacterial signalling protein N terminal repeat FY141_04040 PF00990 Diguanylate cyclase, GGDEF domain FY141_04040 PF00563 EAL domain FY141_04045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_04050 PF00563 EAL domain FY141_04050 PF01590 GAF domain FY141_04050 PF00990 Diguanylate cyclase, GGDEF domain FY141_04050 PF00360 Phytochrome region FY141_04055 PF00563 EAL domain FY141_04055 PF00990 Diguanylate cyclase, GGDEF domain FY141_04055 PF03707 Bacterial signalling protein N terminal repeat FY141_04060 PF00512 His Kinase A (phospho-acceptor) domain FY141_04060 PF00989 PAS fold FY141_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_04065 PF00196 Bacterial regulatory proteins, luxR family FY141_04065 PF00072 Response regulator receiver domain FY141_04075 PF00005 ABC transporter FY141_04075 PF12848 ABC transporter FY141_04080 PF00990 Diguanylate cyclase, GGDEF domain FY141_04080 PF17158 Membrane-associated sensor, integral membrane domain FY141_04085 PF13417 Glutathione S-transferase, N-terminal domain FY141_04090 PF00334 Nucleoside diphosphate kinase FY141_04110 PF02391 MoaE protein FY141_04120 PF01066 CDP-alcohol phosphatidyltransferase FY141_04125 PF01541 GIY-YIG catalytic domain FY141_04125 PF02151 UvrB/uvrC motif FY141_04125 PF08459 UvrC Helix-hairpin-helix N-terminal FY141_04135 PF13505 Outer membrane protein beta-barrel domain FY141_04145 PF00445 Ribonuclease T2 family FY141_04155 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FY141_04160 PF01568 Molydopterin dinucleotide binding domain FY141_04160 PF00384 Molybdopterin oxidoreductase FY141_04160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY141_04165 PF00293 NUDIX domain FY141_04175 PF00551 Formyl transferase FY141_04180 PF02769 AIR synthase related protein, C-terminal domain FY141_04180 PF00586 AIR synthase related protein, N-terminal domain FY141_04185 PF01209 ubiE/COQ5 methyltransferase family FY141_04190 PF01594 AI-2E family transporter FY141_04200 PF13090 Polyphosphate kinase C-terminal domain 2 FY141_04200 PF17941 Polyphosphate kinase C-terminal domain 1 FY141_04200 PF13089 Polyphosphate kinase N-terminal domain FY141_04200 PF02503 Polyphosphate kinase middle domain FY141_04205 PF02541 Ppx/GppA phosphatase family FY141_04210 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_04230 PF00211 Adenylate and Guanylate cyclase catalytic domain FY141_04240 PF01612 3'-5' exonuclease FY141_04240 PF00570 HRDC domain FY141_04245 PF07690 Major Facilitator Superfamily FY141_04250 PF02938 GAD domain FY141_04250 PF00152 tRNA synthetases class II (D, K and N) FY141_04250 PF01336 OB-fold nucleic acid binding domain FY141_04260 PF00672 HAMP domain FY141_04260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_04265 PF01740 STAS domain FY141_04265 PF00916 Sulfate permease family FY141_04275 PF03989 DNA gyrase C-terminal domain, beta-propeller FY141_04275 PF00521 DNA gyrase/topoisomerase IV, subunit A FY141_04280 PF04377 Arginine-tRNA-protein transferase, C terminus FY141_04280 PF04376 Arginine-tRNA-protein transferase, N terminus FY141_04290 PF00490 Delta-aminolevulinic acid dehydratase FY141_04310 PF00464 Serine hydroxymethyltransferase FY141_04315 PF03477 ATP cone domain FY141_04320 PF01872 RibD C-terminal domain FY141_04320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY141_04325 PF00677 Lumazine binding domain FY141_04330 PF01810 LysE type translocator FY141_04335 PF00885 6,7-dimethyl-8-ribityllumazine synthase FY141_04340 PF01029 NusB family FY141_04345 PF07690 Major Facilitator Superfamily FY141_04350 PF03030 Inorganic H+ pyrophosphatase FY141_04370 PF02504 Fatty acid synthesis protein FY141_04375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY141_04375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY141_04380 PF00216 Bacterial DNA-binding protein FY141_04385 PF13411 MerR HTH family regulatory protein FY141_04400 PF00403 Heavy-metal-associated domain FY141_04405 PF00111 2Fe-2S iron-sulfur cluster binding domain FY141_04405 PF00175 Oxidoreductase NAD-binding domain FY141_04405 PF00970 Oxidoreductase FAD-binding domain FY141_04410 PF00376 MerR family regulatory protein FY141_04410 PF09278 MerR, DNA binding FY141_04415 PF00528 Binding-protein-dependent transport system inner membrane component FY141_04420 PF00528 Binding-protein-dependent transport system inner membrane component FY141_04420 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_04425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_04425 PF00005 ABC transporter FY141_04430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_04430 PF00005 ABC transporter FY141_04435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_04445 PF02386 Cation transport protein FY141_04450 PF00291 Pyridoxal-phosphate dependent enzyme FY141_04450 PF00585 C-terminal regulatory domain of Threonine dehydratase FY141_04460 PF00990 Diguanylate cyclase, GGDEF domain FY141_04465 PF02525 Flavodoxin-like fold FY141_04470 PF03466 LysR substrate binding domain FY141_04470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_04475 PF00149 Calcineurin-like phosphoesterase FY141_04475 PF02872 5'-nucleotidase, C-terminal domain FY141_04495 PF00581 Rhodanese-like domain FY141_04500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY141_04500 PF01411 tRNA synthetases class II (A) FY141_04500 PF02272 DHHA1 domain FY141_04505 PF00571 CBS domain FY141_04505 PF00291 Pyridoxal-phosphate dependent enzyme FY141_04510 PF00875 DNA photolyase FY141_04510 PF03441 FAD binding domain of DNA photolyase FY141_04520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY141_04520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY141_04550 PF06055 Exopolysaccharide synthesis, ExoD FY141_04555 PF09335 SNARE associated Golgi protein FY141_04600 PF02397 Bacterial sugar transferase FY141_04605 PF00534 Glycosyl transferases group 1 FY141_04630 PF02628 Cytochrome oxidase assembly protein FY141_04635 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FY141_04640 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY141_04645 PF00491 Arginase family FY141_04650 PF00380 Ribosomal protein S9/S16 FY141_04655 PF00572 Ribosomal protein L13 FY141_04665 PF13380 CoA binding domain FY141_04670 PF01053 Cys/Met metabolism PLP-dependent enzyme FY141_04695 PF00067 Cytochrome P450 FY141_04700 PF00990 Diguanylate cyclase, GGDEF domain FY141_04705 PF00574 Clp protease FY141_04710 PF10431 C-terminal, D2-small domain, of ClpB protein FY141_04710 PF07724 AAA domain (Cdc48 subfamily) FY141_04710 PF06689 ClpX C4-type zinc finger FY141_04715 PF02190 ATP-dependent protease La (LON) substrate-binding domain FY141_04715 PF05362 Lon protease (S16) C-terminal proteolytic domain FY141_04715 PF00004 ATPase family associated with various cellular activities (AAA) FY141_04720 PF00216 Bacterial DNA-binding protein FY141_04725 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY141_04750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FY141_04755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FY141_04760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FY141_04770 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FY141_04785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY141_04785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY141_04785 PF10531 SLBB domain FY141_04790 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FY141_04790 PF00384 Molybdopterin oxidoreductase FY141_04790 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY141_04795 PF00146 NADH dehydrogenase FY141_04800 PF12838 4Fe-4S dicluster domain FY141_04805 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FY141_04810 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FY141_04815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FY141_04815 PF00361 Proton-conducting membrane transporter FY141_04820 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FY141_04820 PF00361 Proton-conducting membrane transporter FY141_04825 PF00361 Proton-conducting membrane transporter FY141_04830 PF02237 Biotin protein ligase C terminal domain FY141_04830 PF03099 Biotin/lipoate A/B protein ligase family FY141_04830 PF08279 HTH domain FY141_04835 PF12706 Beta-lactamase superfamily domain FY141_04835 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY141_04835 PF17770 Ribonuclease J C-terminal domain FY141_04845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY141_04845 PF03129 Anticodon binding domain FY141_04850 PF12704 MacB-like periplasmic core domain FY141_04850 PF02687 FtsX-like permease family FY141_04855 PF00005 ABC transporter FY141_04860 PF14579 Helix-hairpin-helix motif FY141_04860 PF02811 PHP domain FY141_04860 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY141_04860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY141_04870 PF11799 impB/mucB/samB family C-terminal domain FY141_04870 PF00817 impB/mucB/samB family FY141_04890 PF00072 Response regulator receiver domain FY141_04895 PF00072 Response regulator receiver domain FY141_04895 PF00990 Diguanylate cyclase, GGDEF domain FY141_04900 PF00471 Ribosomal protein L33 FY141_04905 PF07690 Major Facilitator Superfamily FY141_04920 PF00575 S1 RNA binding domain FY141_04920 PF17876 Cold shock domain FY141_04920 PF00773 RNB domain FY141_04920 PF08461 Ribonuclease R winged-helix domain FY141_04920 PF08206 Ribonuclease B OB domain FY141_04925 PF01751 Toprim domain FY141_04925 PF13368 Topoisomerase C-terminal repeat FY141_04925 PF01396 Topoisomerase DNA binding C4 zinc finger FY141_04925 PF01131 DNA topoisomerase FY141_04935 PF17782 DprA winged helix domain FY141_04935 PF02481 DNA recombination-mediator protein A FY141_04940 PF02660 Glycerol-3-phosphate acyltransferase FY141_04945 PF01979 Amidohydrolase family FY141_04950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FY141_04950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FY141_04965 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_04965 PF18158 Adaptive response protein AidB N-terminal domain FY141_04965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_04970 PF00583 Acetyltransferase (GNAT) family FY141_04990 PF03652 Holliday junction resolvase FY141_04995 PF03831 PhnA domain FY141_04995 PF08274 PhnA Zinc-Ribbon FY141_05005 PF02686 Glu-tRNAGln amidotransferase C subunit FY141_05010 PF01425 Amidase FY141_05015 PF00583 Acetyltransferase (GNAT) family FY141_05015 PF13673 Acetyltransferase (GNAT) domain FY141_05020 PF09857 Putative toxin of bacterial toxin-antitoxin pair FY141_05035 PF02934 GatB/GatE catalytic domain FY141_05035 PF02637 GatB domain FY141_05065 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FY141_05070 PF02785 Biotin carboxylase C-terminal domain FY141_05070 PF00289 Biotin carboxylase, N-terminal domain FY141_05070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_05075 PF00364 Biotin-requiring enzyme FY141_05080 PF01220 Dehydroquinase class II FY141_05090 PF00155 Aminotransferase class I and II FY141_05115 PF12111 Polyribonucleotide phosphorylase C terminal FY141_05115 PF10150 Ribonuclease E/G family FY141_05115 PF00575 S1 RNA binding domain FY141_05120 PF01520 N-acetylmuramoyl-L-alanine amidase FY141_05125 PF17092 Penicillin-binding protein OB-like domain FY141_05125 PF00912 Transglycosylase FY141_05125 PF00905 Penicillin binding protein transpeptidase domain FY141_05145 PF01513 ATP-NAD kinase FY141_05150 PF02567 Phenazine biosynthesis-like protein FY141_05155 PF00009 Elongation factor Tu GTP binding domain FY141_05155 PF00679 Elongation factor G C-terminus FY141_05155 PF03764 Elongation factor G, domain IV FY141_05170 PF00111 2Fe-2S iron-sulfur cluster binding domain FY141_05180 PF00809 Pterin binding enzyme FY141_05185 PF02152 Dihydroneopterin aldolase FY141_05190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FY141_05200 PF05128 Domain of unknown function (DUF697) FY141_05205 PF04317 YcjX-like family, DUF463 FY141_05215 PF01258 Prokaryotic dksA/traR C4-type zinc finger FY141_05230 PF00072 Response regulator receiver domain FY141_05230 PF00512 His Kinase A (phospho-acceptor) domain FY141_05230 PF08448 PAS fold FY141_05230 PF13188 PAS domain FY141_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_05235 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY141_05240 PF00004 ATPase family associated with various cellular activities (AAA) FY141_05240 PF07724 AAA domain (Cdc48 subfamily) FY141_05240 PF17871 AAA lid domain FY141_05240 PF02861 Clp amino terminal domain, pathogenicity island component FY141_05240 PF10431 C-terminal, D2-small domain, of ClpB protein FY141_05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_05260 PF03466 LysR substrate binding domain FY141_05270 PF01230 HIT domain FY141_05295 PF00318 Ribosomal protein S2 FY141_05300 PF00889 Elongation factor TS FY141_05305 PF00696 Amino acid kinase family FY141_05310 PF01765 Ribosome recycling factor FY141_05315 PF01255 Putative undecaprenyl diphosphate synthase FY141_05325 PF17820 PDZ domain FY141_05325 PF02163 Peptidase family M50 FY141_05330 PF01103 Surface antigen FY141_05330 PF07244 Surface antigen variable number repeat FY141_05335 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_05335 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FY141_05340 PF07977 FabA-like domain FY141_05345 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FY141_05345 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_05350 PF06230 LpxI C-terminal domain FY141_05350 PF17930 LpxI N-terminal domain FY141_05355 PF02684 Lipid-A-disaccharide synthetase FY141_05360 PF07729 FCD domain FY141_05360 PF00392 Bacterial regulatory proteins, gntR family FY141_05365 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_05370 PF00528 Binding-protein-dependent transport system inner membrane component FY141_05375 PF00528 Binding-protein-dependent transport system inner membrane component FY141_05380 PF00005 ABC transporter FY141_05385 PF00285 Citrate synthase, C-terminal domain FY141_05400 PF01726 LexA DNA binding domain FY141_05400 PF00717 Peptidase S24-like FY141_05425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FY141_05425 PF00437 Type II/IV secretion system protein FY141_05430 PF00482 Type II secretion system (T2SS), protein F FY141_05450 PF07963 Prokaryotic N-terminal methylation motif FY141_05450 PF08334 Type II secretion system (T2SS), protein G FY141_05460 PF00263 Bacterial type II and III secretion system protein FY141_05460 PF03958 Bacterial type II/III secretion system short domain FY141_05485 PF00793 DAHP synthetase I family FY141_05490 PF00113 Enolase, C-terminal TIM barrel domain FY141_05490 PF03952 Enolase, N-terminal domain FY141_05500 PF00676 Dehydrogenase E1 component FY141_05505 PF00364 Biotin-requiring enzyme FY141_05505 PF02780 Transketolase, C-terminal domain FY141_05505 PF02779 Transketolase, pyrimidine binding domain FY141_05510 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY141_05510 PF00364 Biotin-requiring enzyme FY141_05510 PF02817 e3 binding domain FY141_05520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY141_05520 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_05530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FY141_05530 PF04055 Radical SAM superfamily FY141_05535 PF00892 EamA-like transporter family FY141_05550 PF03364 Polyketide cyclase / dehydrase and lipid transport FY141_05555 PF02464 Competence-damaged protein FY141_05560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FY141_05560 PF02542 YgbB family FY141_05565 PF01207 Dihydrouridine synthase (Dus) FY141_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_05570 PF00512 His Kinase A (phospho-acceptor) domain FY141_05570 PF00989 PAS fold FY141_05575 PF00072 Response regulator receiver domain FY141_05575 PF00158 Sigma-54 interaction domain FY141_05575 PF02954 Bacterial regulatory protein, Fis family FY141_05580 PF00672 HAMP domain FY141_05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_05580 PF00512 His Kinase A (phospho-acceptor) domain FY141_05580 PF00989 PAS fold FY141_05585 PF02954 Bacterial regulatory protein, Fis family FY141_05585 PF00072 Response regulator receiver domain FY141_05585 PF00158 Sigma-54 interaction domain FY141_05590 PF02080 TrkA-C domain FY141_05590 PF02254 TrkA-N domain FY141_05595 PF17209 Hfq protein FY141_05600 PF13167 GTP-binding GTPase N-terminal FY141_05600 PF16360 GTP-binding GTPase Middle Region FY141_05600 PF01926 50S ribosome-binding GTPase FY141_05605 PF03819 MazG nucleotide pyrophosphohydrolase domain FY141_05615 PF10414 Sirohaem synthase dimerisation region FY141_05615 PF14824 Sirohaem biosynthesis protein central FY141_05615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_05635 PF00970 Oxidoreductase FAD-binding domain FY141_05635 PF00175 Oxidoreductase NAD-binding domain FY141_05655 PF02347 Glycine cleavage system P-protein FY141_05660 PF01597 Glycine cleavage H-protein FY141_05665 PF01571 Aminomethyltransferase folate-binding domain FY141_05665 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY141_05690 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FY141_05695 PF00849 RNA pseudouridylate synthase FY141_05695 PF01479 S4 domain FY141_05700 PF13419 Haloacid dehalogenase-like hydrolase FY141_05715 PF01042 Endoribonuclease L-PSP FY141_05720 PF00756 Putative esterase FY141_05730 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FY141_05745 PF10417 C-terminal domain of 1-Cys peroxiredoxin FY141_05745 PF00578 AhpC/TSA family FY141_05750 PF00043 Glutathione S-transferase, C-terminal domain FY141_05750 PF02798 Glutathione S-transferase, N-terminal domain FY141_05765 PF03358 NADPH-dependent FMN reductase FY141_05770 PF03960 ArsC family FY141_05775 PF01758 Sodium Bile acid symporter family FY141_05780 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY141_05790 PF00654 Voltage gated chloride channel FY141_05795 PF03099 Biotin/lipoate A/B protein ligase family FY141_05795 PF12706 Beta-lactamase superfamily domain FY141_05800 PF01026 TatD related DNase FY141_05805 PF09334 tRNA synthetases class I (M) FY141_05805 PF08264 Anticodon-binding domain of tRNA FY141_05810 PF09115 DNA polymerase III, delta subunit, C terminal FY141_05815 PF02223 Thymidylate kinase FY141_05820 PF07943 Penicillin-binding protein 5, C-terminal domain FY141_05820 PF00768 D-alanyl-D-alanine carboxypeptidase FY141_05825 PF03330 Lytic transglycolase FY141_05825 PF05036 Sporulation related domain FY141_05865 PF03989 DNA gyrase C-terminal domain, beta-propeller FY141_05865 PF00521 DNA gyrase/topoisomerase IV, subunit A FY141_05870 PF01914 MarC family integral membrane protein FY141_05875 PF00571 CBS domain FY141_05875 PF01743 Poly A polymerase head domain FY141_05885 PF00436 Single-strand binding protein family FY141_05890 PF17755 UvrA DNA-binding domain FY141_05890 PF17760 UvrA interaction domain FY141_05900 PF01207 Dihydrouridine synthase (Dus) FY141_05905 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY141_05910 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_05920 PF00950 ABC 3 transport family FY141_05925 PF00005 ABC transporter FY141_05930 PF01297 Zinc-uptake complex component A periplasmic FY141_05935 PF00356 Bacterial regulatory proteins, lacI family FY141_05945 PF00248 Aldo/keto reductase family FY141_05955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY141_05955 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FY141_05960 PF03597 Cytochrome oxidase maturation protein cbb3-type FY141_05970 PF05751 FixH FY141_05975 PF12801 4Fe-4S binding domain FY141_05975 PF13746 4Fe-4S dicluster domain FY141_05975 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FY141_05995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FY141_05995 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FY141_06010 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY141_06015 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FY141_06035 PF00376 MerR family regulatory protein FY141_06035 PF09278 MerR, DNA binding FY141_06040 PF03448 MgtE intracellular N domain FY141_06040 PF01769 Divalent cation transporter FY141_06040 PF00571 CBS domain FY141_06045 PF00384 Molybdopterin oxidoreductase FY141_06055 PF01327 Polypeptide deformylase FY141_06065 PF00989 PAS fold FY141_06065 PF00512 His Kinase A (phospho-acceptor) domain FY141_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_06075 PF03099 Biotin/lipoate A/B protein ligase family FY141_06080 PF08240 Alcohol dehydrogenase GroES-like domain FY141_06080 PF00107 Zinc-binding dehydrogenase FY141_06105 PF07549 SecD/SecF GG Motif FY141_06105 PF02355 Protein export membrane protein FY141_06110 PF02699 Preprotein translocase subunit FY141_06120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY141_06120 PF08240 Alcohol dehydrogenase GroES-like domain FY141_06125 PF00440 Bacterial regulatory proteins, tetR family FY141_06125 PF08360 QacR-like protein, C-terminal region FY141_06130 PF00067 Cytochrome P450 FY141_06140 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_06140 PF06426 Serine acetyltransferase, N-terminal FY141_06145 PF00561 alpha/beta hydrolase fold FY141_06155 PF01494 FAD binding domain FY141_06160 PF01053 Cys/Met metabolism PLP-dependent enzyme FY141_06165 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_06170 PF00528 Binding-protein-dependent transport system inner membrane component FY141_06175 PF00528 Binding-protein-dependent transport system inner membrane component FY141_06180 PF00005 ABC transporter FY141_06195 PF17768 RecJ OB domain FY141_06195 PF02272 DHHA1 domain FY141_06195 PF01368 DHH family FY141_06205 PF03447 Homoserine dehydrogenase, NAD binding domain FY141_06205 PF00742 Homoserine dehydrogenase FY141_06205 PF01842 ACT domain FY141_06210 PF00155 Aminotransferase class I and II FY141_06215 PF01156 Inosine-uridine preferring nucleoside hydrolase FY141_06220 PF01925 Sulfite exporter TauE/SafE FY141_06235 PF08240 Alcohol dehydrogenase GroES-like domain FY141_06235 PF00107 Zinc-binding dehydrogenase FY141_06240 PF00109 Beta-ketoacyl synthase, N-terminal domain FY141_06240 PF02801 Beta-ketoacyl synthase, C-terminal domain FY141_06250 PF07977 FabA-like domain FY141_06255 PF00550 Phosphopantetheine attachment site FY141_06260 PF04055 Radical SAM superfamily FY141_06265 PF00027 Cyclic nucleotide-binding domain FY141_06265 PF13545 Crp-like helix-turn-helix domain FY141_06275 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FY141_06280 PF03749 Sugar fermentation stimulation protein RE domain FY141_06280 PF17746 SfsA N-terminal OB domain FY141_06285 PF00557 Metallopeptidase family M24 FY141_06290 PF04002 RadC-like JAB domain FY141_06305 PF01474 Class-II DAHP synthetase family FY141_06320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY141_06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_06330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FY141_06335 PF13419 Haloacid dehalogenase-like hydrolase FY141_06345 PF00206 Lyase FY141_06345 PF10415 Fumarase C C-terminus FY141_06355 PF00117 Glutamine amidotransferase class-I FY141_06355 PF06418 CTP synthase N-terminus FY141_06360 PF03840 Preprotein translocase SecG subunit FY141_06365 PF00121 Triosephosphate isomerase FY141_06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_06375 PF00204 DNA gyrase B FY141_06375 PF01751 Toprim domain FY141_06375 PF00986 DNA gyrase B subunit, carboxyl terminus FY141_06380 PF01370 NAD dependent epimerase/dehydratase family FY141_06385 PF00574 Clp protease FY141_06395 PF01022 Bacterial regulatory protein, arsR family FY141_06400 PF13091 PLD-like domain FY141_06405 PF00072 Response regulator receiver domain FY141_06410 PF16350 FAD dependent oxidoreductase central domain FY141_06410 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY141_06410 PF01266 FAD dependent oxidoreductase FY141_06410 PF01571 Aminomethyltransferase folate-binding domain FY141_06420 PF12795 Mechanosensitive ion channel porin domain FY141_06420 PF00924 Mechanosensitive ion channel FY141_06420 PF12794 Mechanosensitive ion channel inner membrane domain 1 FY141_06485 PF00005 ABC transporter FY141_06490 PF02405 Permease MlaE FY141_06495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_06495 PF13378 Enolase C-terminal domain-like FY141_06505 PF03949 Malic enzyme, NAD binding domain FY141_06505 PF00390 Malic enzyme, N-terminal domain FY141_06505 PF01515 Phosphate acetyl/butaryl transferase FY141_06515 PF00881 Nitroreductase family FY141_06520 PF07676 WD40-like Beta Propeller Repeat FY141_06530 PF02540 NAD synthase FY141_06530 PF00795 Carbon-nitrogen hydrolase FY141_06535 PF00884 Sulfatase FY141_06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_06545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY141_06560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FY141_06560 PF05698 Bacterial trigger factor protein (TF) C-terminus FY141_06560 PF05697 Bacterial trigger factor protein (TF) FY141_06580 PF01134 Glucose inhibited division protein A FY141_06600 PF00107 Zinc-binding dehydrogenase FY141_06600 PF08240 Alcohol dehydrogenase GroES-like domain FY141_06610 PF00550 Phosphopantetheine attachment site FY141_06615 PF13193 AMP-binding enzyme C-terminal domain FY141_06615 PF00501 AMP-binding enzyme FY141_06625 PF04715 Anthranilate synthase component I, N terminal region FY141_06625 PF00425 chorismate binding enzyme FY141_06625 PF00117 Glutamine amidotransferase class-I FY141_06630 PF01702 Queuine tRNA-ribosyltransferase FY141_06635 PF02547 Queuosine biosynthesis protein FY141_06640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY141_06645 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FY141_06650 PF01467 Cytidylyltransferase-like FY141_06665 PF00591 Glycosyl transferase family, a/b domain FY141_06665 PF02885 Glycosyl transferase family, helical bundle domain FY141_06670 PF00218 Indole-3-glycerol phosphate synthase FY141_06675 PF01967 MoaC family FY141_06680 PF03454 MoeA C-terminal region (domain IV) FY141_06680 PF03453 MoeA N-terminal region (domain I and II) FY141_06680 PF00994 Probable molybdopterin binding domain FY141_06685 PF17158 Membrane-associated sensor, integral membrane domain FY141_06685 PF00990 Diguanylate cyclase, GGDEF domain FY141_06695 PF00999 Sodium/hydrogen exchanger family FY141_06695 PF02254 TrkA-N domain FY141_06705 PF06463 Molybdenum Cofactor Synthesis C FY141_06705 PF04055 Radical SAM superfamily FY141_06715 PF07690 Major Facilitator Superfamily FY141_06720 PF12804 MobA-like NTP transferase domain FY141_06725 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FY141_06730 PF01551 Peptidase family M23 FY141_06740 PF01975 Survival protein SurE FY141_06745 PF02403 Seryl-tRNA synthetase N-terminal domain FY141_06745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY141_06750 PF00902 Sec-independent protein translocase protein (TatC) FY141_06755 PF02416 mttA/Hcf106 family FY141_06760 PF02416 mttA/Hcf106 family FY141_06765 PF04079 Segregation and condensation complex subunit ScpB FY141_06770 PF02616 Segregation and condensation protein ScpA FY141_06775 PF00933 Glycosyl hydrolase family 3 N terminal domain FY141_06785 PF03485 Arginyl tRNA synthetase N terminal domain FY141_06785 PF05746 DALR anticodon binding domain FY141_06785 PF00750 tRNA synthetases class I (R) FY141_06790 PF01966 HD domain FY141_06790 PF13286 Phosphohydrolase-associated domain FY141_06795 PF01521 Iron-sulphur cluster biosynthesis FY141_06805 PF08238 Sel1 repeat FY141_06815 PF10458 Valyl tRNA synthetase tRNA binding arm FY141_06815 PF00133 tRNA synthetases class I (I, L, M and V) FY141_06815 PF08264 Anticodon-binding domain of tRNA FY141_06965 PF00565 Staphylococcal nuclease homologue FY141_07040 PF06381 Protein of unknown function (DUF1073) FY141_07090 PF00308 Bacterial dnaA protein FY141_07090 PF08299 Bacterial dnaA protein helix-turn-helix FY141_07090 PF11638 DnaA N-terminal domain FY141_07110 PF00145 C-5 cytosine-specific DNA methylase FY141_07115 PF14528 LAGLIDADG-like domain FY141_07115 PF03796 DnaB-like helicase C terminal domain FY141_07115 PF00772 DnaB-like helicase N terminal domain FY141_07280 PF03358 NADPH-dependent FMN reductase FY141_07285 PF02464 Competence-damaged protein FY141_07285 PF18146 Damage-inducible protein CinA KH domain FY141_07285 PF00994 Probable molybdopterin binding domain FY141_07290 PF00582 Universal stress protein family FY141_07295 PF00156 Phosphoribosyl transferase domain FY141_07305 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FY141_07305 PF02867 Ribonucleotide reductase, barrel domain FY141_07320 PF01566 Natural resistance-associated macrophage protein FY141_07330 PF00664 ABC transporter transmembrane region FY141_07330 PF00005 ABC transporter FY141_07335 PF01594 AI-2E family transporter FY141_07340 PF00583 Acetyltransferase (GNAT) family FY141_07370 PF03129 Anticodon binding domain FY141_07370 PF02824 TGS domain FY141_07370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FY141_07370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY141_07380 PF01809 Putative membrane protein insertion efficiency factor FY141_07390 PF01227 GTP cyclohydrolase I FY141_07395 PF01502 Phosphoribosyl-AMP cyclohydrolase FY141_07400 PF01734 Patatin-like phospholipase FY141_07410 PF00478 IMP dehydrogenase / GMP reductase domain FY141_07410 PF00571 CBS domain FY141_07445 PF03315 Serine dehydratase beta chain FY141_07445 PF03313 Serine dehydratase alpha chain FY141_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_07485 PF03466 LysR substrate binding domain FY141_07495 PF01965 DJ-1/PfpI family FY141_07495 PF12833 Helix-turn-helix domain FY141_07500 PF01256 Carbohydrate kinase FY141_07500 PF03853 YjeF-related protein N-terminus FY141_07510 PF00543 Nitrogen regulatory protein P-II FY141_07515 PF00120 Glutamine synthetase, catalytic domain FY141_07515 PF03951 Glutamine synthetase, beta-Grasp domain FY141_07525 PF08755 Hemimethylated DNA-binding protein YccV like FY141_07535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_07545 PF00892 EamA-like transporter family FY141_07555 PF03461 TRCF domain FY141_07555 PF17757 UvrB interaction domain FY141_07555 PF00270 DEAD/DEAH box helicase FY141_07555 PF02559 CarD-like/TRCF domain FY141_07555 PF00271 Helicase conserved C-terminal domain FY141_07565 PF00270 DEAD/DEAH box helicase FY141_07565 PF00271 Helicase conserved C-terminal domain FY141_07565 PF17191 RecG wedge domain FY141_07580 PF01850 PIN domain FY141_07595 PF01380 SIS domain FY141_07605 PF12804 MobA-like NTP transferase domain FY141_07605 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_07605 PF14602 Hexapeptide repeat of succinyl-transferase FY141_07610 PF00392 Bacterial regulatory proteins, gntR family FY141_07610 PF07729 FCD domain FY141_07615 PF02608 ABC transporter substrate-binding protein PnrA-like FY141_07620 PF02653 Branched-chain amino acid transport system / permease component FY141_07625 PF02653 Branched-chain amino acid transport system / permease component FY141_07630 PF00005 ABC transporter FY141_07640 PF01494 FAD binding domain FY141_07645 PF03547 Membrane transport protein FY141_07650 PF02683 Cytochrome C biogenesis protein transmembrane region FY141_07670 PF00313 'Cold-shock' DNA-binding domain FY141_07720 PF00005 ABC transporter FY141_07720 PF02687 FtsX-like permease family FY141_07720 PF12704 MacB-like periplasmic core domain FY141_07725 PF02687 FtsX-like permease family FY141_07725 PF00005 ABC transporter FY141_07725 PF12704 MacB-like periplasmic core domain FY141_07745 PF01521 Iron-sulphur cluster biosynthesis FY141_07750 PF01883 Iron-sulfur cluster assembly protein FY141_07755 PF00266 Aminotransferase class-V FY141_07760 PF01458 Uncharacterized protein family (UPF0051) FY141_07765 PF00005 ABC transporter FY141_07770 PF01458 Uncharacterized protein family (UPF0051) FY141_07775 PF00266 Aminotransferase class-V FY141_07780 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY141_07785 PF03702 Anhydro-N-acetylmuramic acid kinase FY141_07790 PF00579 tRNA synthetases class I (W and Y) FY141_07800 PF00578 AhpC/TSA family FY141_07805 PF04305 Protein of unknown function (DUF455) FY141_07810 PF01476 LysM domain FY141_07810 PF01551 Peptidase family M23 FY141_07810 PF08525 Opacity-associated protein A N-terminal motif FY141_07815 PF00270 DEAD/DEAH box helicase FY141_07815 PF00271 Helicase conserved C-terminal domain FY141_07830 PF00834 Ribulose-phosphate 3 epimerase family FY141_07840 PF10397 Adenylosuccinate lyase C-terminus FY141_07840 PF00206 Lyase FY141_07850 PF01259 SAICAR synthetase FY141_07855 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FY141_07875 PF00155 Aminotransferase class I and II FY141_07875 PF00392 Bacterial regulatory proteins, gntR family FY141_07880 PF00586 AIR synthase related protein, N-terminal domain FY141_07880 PF02769 AIR synthase related protein, C-terminal domain FY141_07880 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FY141_07900 PF00462 Glutaredoxin FY141_07905 PF07690 Major Facilitator Superfamily FY141_07910 PF00459 Inositol monophosphatase family FY141_07915 PF00459 Inositol monophosphatase family FY141_07920 PF01171 PP-loop family FY141_07925 PF04960 Glutaminase FY141_07930 PF01479 S4 domain FY141_07930 PF00163 Ribosomal protein S4/S9 N-terminal domain FY141_07935 PF03741 Integral membrane protein TerC family FY141_07945 PF00892 EamA-like transporter family FY141_07950 PF01810 LysE type translocator FY141_07960 PF01177 Asp/Glu/Hydantoin racemase FY141_07965 PF00588 SpoU rRNA Methylase family FY141_07975 PF00180 Isocitrate/isopropylmalate dehydrogenase FY141_07985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FY141_07985 PF02272 DHHA1 domain FY141_07985 PF01411 tRNA synthetases class II (A) FY141_07990 PF00154 recA bacterial DNA recombination protein FY141_07995 PF00294 pfkB family carbohydrate kinase FY141_08000 PF04227 Indigoidine synthase A like protein FY141_08005 PF01389 OmpA-like transmembrane domain FY141_08005 PF00691 OmpA family FY141_08010 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_08015 PF00528 Binding-protein-dependent transport system inner membrane component FY141_08020 PF00528 Binding-protein-dependent transport system inner membrane component FY141_08025 PF06233 Usg-like family FY141_08030 PF08241 Methyltransferase domain FY141_08035 PF09084 NMT1/THI5 like FY141_08040 PF13404 AsnC-type helix-turn-helix domain FY141_08040 PF01037 Lrp/AsnC ligand binding domain FY141_08045 PF03167 Uracil DNA glycosylase superfamily FY141_08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_08055 PF00989 PAS fold FY141_08055 PF00512 His Kinase A (phospho-acceptor) domain FY141_08060 PF01219 Prokaryotic diacylglycerol kinase FY141_08065 PF02277 Phosphoribosyltransferase FY141_08070 PF02654 Cobalamin-5-phosphate synthase FY141_08085 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FY141_08090 PF01061 ABC-2 type transporter FY141_08095 PF00005 ABC transporter FY141_08100 PF01925 Sulfite exporter TauE/SafE FY141_08110 PF08269 Cache domain FY141_08110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_08120 PF00004 ATPase family associated with various cellular activities (AAA) FY141_08120 PF16193 AAA C-terminal domain FY141_08120 PF12002 MgsA AAA+ ATPase C terminal FY141_08125 PF00595 PDZ domain FY141_08125 PF13180 PDZ domain FY141_08145 PF00920 Dehydratase family FY141_08150 PF00174 Oxidoreductase molybdopterin binding domain FY141_08155 PF01794 Ferric reductase like transmembrane component FY141_08165 PF05675 Protein of unknown function (DUF817) FY141_08170 PF01196 Ribosomal protein L17 FY141_08175 PF01000 RNA polymerase Rpb3/RpoA insert domain FY141_08175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FY141_08175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FY141_08180 PF00411 Ribosomal protein S11 FY141_08185 PF00416 Ribosomal protein S13/S18 FY141_08195 PF00344 SecY translocase FY141_08200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FY141_08205 PF00327 Ribosomal protein L30p/L7e FY141_08210 PF00333 Ribosomal protein S5, N-terminal domain FY141_08210 PF03719 Ribosomal protein S5, C-terminal domain FY141_08215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FY141_08220 PF00347 Ribosomal protein L6 FY141_08225 PF00410 Ribosomal protein S8 FY141_08230 PF00253 Ribosomal protein S14p/S29e FY141_08235 PF00281 Ribosomal protein L5 FY141_08235 PF00673 ribosomal L5P family C-terminus FY141_08240 PF00467 KOW motif FY141_08240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FY141_08245 PF00238 Ribosomal protein L14p/L23e FY141_08250 PF00366 Ribosomal protein S17 FY141_08255 PF00831 Ribosomal L29 protein FY141_08260 PF00252 Ribosomal protein L16p/L10e FY141_08265 PF00189 Ribosomal protein S3, C-terminal domain FY141_08265 PF07650 KH domain FY141_08270 PF00237 Ribosomal protein L22p/L17e FY141_08275 PF00203 Ribosomal protein S19 FY141_08280 PF03947 Ribosomal Proteins L2, C-terminal domain FY141_08280 PF00181 Ribosomal Proteins L2, RNA binding domain FY141_08285 PF00276 Ribosomal protein L23 FY141_08290 PF00573 Ribosomal protein L4/L1 family FY141_08295 PF00297 Ribosomal protein L3 FY141_08300 PF00338 Ribosomal protein S10p/S20e FY141_08305 PF00009 Elongation factor Tu GTP binding domain FY141_08305 PF03144 Elongation factor Tu domain 2 FY141_08305 PF03143 Elongation factor Tu C-terminal domain FY141_08310 PF00679 Elongation factor G C-terminus FY141_08310 PF14492 Elongation Factor G, domain II FY141_08310 PF03764 Elongation factor G, domain IV FY141_08310 PF00009 Elongation factor Tu GTP binding domain FY141_08310 PF03144 Elongation factor Tu domain 2 FY141_08315 PF00177 Ribosomal protein S7p/S5e FY141_08320 PF00164 Ribosomal protein S12/S23 FY141_08340 PF04998 RNA polymerase Rpb1, domain 5 FY141_08340 PF04983 RNA polymerase Rpb1, domain 3 FY141_08340 PF05000 RNA polymerase Rpb1, domain 4 FY141_08340 PF04997 RNA polymerase Rpb1, domain 1 FY141_08340 PF00623 RNA polymerase Rpb1, domain 2 FY141_08345 PF04560 RNA polymerase Rpb2, domain 7 FY141_08345 PF10385 RNA polymerase beta subunit external 1 domain FY141_08345 PF04565 RNA polymerase Rpb2, domain 3 FY141_08345 PF00562 RNA polymerase Rpb2, domain 6 FY141_08345 PF04563 RNA polymerase beta subunit FY141_08345 PF04561 RNA polymerase Rpb2, domain 2 FY141_08350 PF00542 Ribosomal protein L7/L12 C-terminal domain FY141_08350 PF16320 Ribosomal protein L7/L12 dimerisation domain FY141_08355 PF00466 Ribosomal protein L10 FY141_08360 PF00687 Ribosomal protein L1p/L10e family FY141_08365 PF00298 Ribosomal protein L11, RNA binding domain FY141_08365 PF03946 Ribosomal protein L11, N-terminal domain FY141_08370 PF00467 KOW motif FY141_08370 PF02357 Transcription termination factor nusG FY141_08375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FY141_08385 PF02719 Polysaccharide biosynthesis protein FY141_08385 PF08485 Polysaccharide biosynthesis protein C-terminal FY141_08390 PF03144 Elongation factor Tu domain 2 FY141_08390 PF00009 Elongation factor Tu GTP binding domain FY141_08390 PF03143 Elongation factor Tu C-terminal domain FY141_08395 PF03741 Integral membrane protein TerC family FY141_08400 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FY141_08420 PF00664 ABC transporter transmembrane region FY141_08420 PF00005 ABC transporter FY141_08460 PF04545 Sigma-70, region 4 FY141_08460 PF04542 Sigma-70 region 2 FY141_08470 PF02954 Bacterial regulatory protein, Fis family FY141_08470 PF00072 Response regulator receiver domain FY141_08470 PF00158 Sigma-54 interaction domain FY141_08475 PF00072 Response regulator receiver domain FY141_08475 PF08769 Sporulation initiation factor Spo0A C terminal FY141_08480 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_08480 PF00072 Response regulator receiver domain FY141_08480 PF01627 Hpt domain FY141_08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_08480 PF00512 His Kinase A (phospho-acceptor) domain FY141_08485 PF00072 Response regulator receiver domain FY141_08490 PF13426 PAS domain FY141_08490 PF08447 PAS fold FY141_08490 PF07536 HWE histidine kinase FY141_08495 PF00072 Response regulator receiver domain FY141_08500 PF00512 His Kinase A (phospho-acceptor) domain FY141_08500 PF00360 Phytochrome region FY141_08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_08500 PF01590 GAF domain FY141_08500 PF08446 PAS fold FY141_08515 PF00588 SpoU rRNA Methylase family FY141_08515 PF08032 RNA 2'-O ribose methyltransferase substrate binding FY141_08520 PF03061 Thioesterase superfamily FY141_08540 PF13460 NAD(P)H-binding FY141_08545 PF01638 HxlR-like helix-turn-helix FY141_08560 PF00271 Helicase conserved C-terminal domain FY141_08560 PF04851 Type III restriction enzyme, res subunit FY141_08560 PF02151 UvrB/uvrC motif FY141_08560 PF12344 Ultra-violet resistance protein B FY141_08560 PF17757 UvrB interaction domain FY141_08570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY141_08570 PF00756 Putative esterase FY141_08590 PF01556 DnaJ C terminal domain FY141_08590 PF00226 DnaJ domain FY141_08590 PF00684 DnaJ central domain FY141_08610 PF17151 Periplasmic sensor domain FY141_08610 PF00990 Diguanylate cyclase, GGDEF domain FY141_08620 PF08402 TOBE domain FY141_08620 PF00005 ABC transporter FY141_08630 PF01547 Bacterial extracellular solute-binding protein FY141_08635 PF00155 Aminotransferase class I and II FY141_08640 PF05025 RbsD / FucU transport protein family FY141_08650 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FY141_08650 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FY141_08655 PF00440 Bacterial regulatory proteins, tetR family FY141_08660 PF12833 Helix-turn-helix domain FY141_08660 PF06719 AraC-type transcriptional regulator N-terminus FY141_08665 PF08240 Alcohol dehydrogenase GroES-like domain FY141_08665 PF00107 Zinc-binding dehydrogenase FY141_08670 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_08675 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FY141_08680 PF00196 Bacterial regulatory proteins, luxR family FY141_08680 PF03472 Autoinducer binding domain FY141_08685 PF14490 Helix-hairpin-helix containing domain FY141_08685 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FY141_08685 PF13538 UvrD-like helicase C-terminal domain FY141_08705 PF04542 Sigma-70 region 2 FY141_08705 PF08281 Sigma-70, region 4 FY141_08720 PF00248 Aldo/keto reductase family FY141_08735 PF10369 Small subunit of acetolactate synthase FY141_08740 PF00205 Thiamine pyrophosphate enzyme, central domain FY141_08740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY141_08740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY141_08760 PF13302 Acetyltransferase (GNAT) domain FY141_08770 PF13180 PDZ domain FY141_08775 PF01145 SPFH domain / Band 7 family FY141_08780 PF01145 SPFH domain / Band 7 family FY141_08785 PF00186 Dihydrofolate reductase FY141_08790 PF00303 Thymidylate synthase FY141_08825 PF02913 FAD linked oxidases, C-terminal domain FY141_08825 PF01565 FAD binding domain FY141_08830 PF00873 AcrB/AcrD/AcrF family FY141_08835 PF13533 Biotin-lipoyl like FY141_08845 PF00580 UvrD/REP helicase N-terminal domain FY141_08845 PF13361 UvrD-like helicase C-terminal domain FY141_08870 PF00857 Isochorismatase family FY141_08890 PF01321 Creatinase/Prolidase N-terminal domain FY141_08890 PF00557 Metallopeptidase family M24 FY141_08900 PF02630 SCO1/SenC FY141_08910 PF01584 CheW-like domain FY141_08920 PF00929 Exonuclease FY141_08925 PF03466 LysR substrate binding domain FY141_08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_08935 PF00583 Acetyltransferase (GNAT) family FY141_08940 PF01636 Phosphotransferase enzyme family FY141_08945 PF12826 Helix-hairpin-helix motif FY141_08945 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FY141_08945 PF03120 NAD-dependent DNA ligase OB-fold domain FY141_08945 PF01653 NAD-dependent DNA ligase adenylation domain FY141_08945 PF00533 BRCA1 C Terminus (BRCT) domain FY141_08950 PF02463 RecF/RecN/SMC N terminal domain FY141_08955 PF13525 Outer membrane lipoprotein FY141_08960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FY141_08965 PF12327 FtsZ family, C-terminal domain FY141_08965 PF00091 Tubulin/FtsZ family, GTPase domain FY141_08970 PF02491 SHS2 domain inserted in FTSA FY141_08975 PF08478 POTRA domain, FtsQ-type FY141_08975 PF03799 Cell division protein FtsQ FY141_08980 PF07478 D-ala D-ala ligase C-terminus FY141_08980 PF01820 D-ala D-ala ligase N-terminus FY141_08985 PF07690 Major Facilitator Superfamily FY141_08985 PF00083 Sugar (and other) transporter FY141_08990 PF00563 EAL domain FY141_08990 PF00990 Diguanylate cyclase, GGDEF domain FY141_08995 PF01565 FAD binding domain FY141_08995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FY141_09000 PF08245 Mur ligase middle domain FY141_09000 PF01225 Mur ligase family, catalytic domain FY141_09000 PF02875 Mur ligase family, glutamate ligase domain FY141_09005 PF04101 Glycosyltransferase family 28 C-terminal domain FY141_09005 PF03033 Glycosyltransferase family 28 N-terminal domain FY141_09010 PF01098 Cell cycle protein FY141_09015 PF02875 Mur ligase family, glutamate ligase domain FY141_09015 PF08245 Mur ligase middle domain FY141_09020 PF00953 Glycosyl transferase family 4 FY141_09020 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FY141_09025 PF01225 Mur ligase family, catalytic domain FY141_09025 PF02875 Mur ligase family, glutamate ligase domain FY141_09025 PF08245 Mur ligase middle domain FY141_09030 PF08245 Mur ligase middle domain FY141_09030 PF01225 Mur ligase family, catalytic domain FY141_09030 PF02875 Mur ligase family, glutamate ligase domain FY141_09035 PF03717 Penicillin-binding Protein dimerisation domain FY141_09035 PF00905 Penicillin binding protein transpeptidase domain FY141_09045 PF01795 MraW methylase family FY141_09050 PF02381 MraZ protein, putative antitoxin-like FY141_09075 PF01510 N-acetylmuramoyl-L-alanine amidase FY141_09080 PF00226 DnaJ domain FY141_09080 PF05099 Tellurite resistance protein TerB FY141_09085 PF00365 Phosphofructokinase FY141_09105 PF13649 Methyltransferase domain FY141_09110 PF01183 Glycosyl hydrolases family 25 FY141_09120 PF02219 Methylenetetrahydrofolate reductase FY141_09125 PF01209 ubiE/COQ5 methyltransferase family FY141_09130 PF00005 ABC transporter FY141_09130 PF12848 ABC transporter FY141_09135 PF12146 Serine aminopeptidase, S33 FY141_09140 PF02515 CoA-transferase family III FY141_09145 PF00205 Thiamine pyrophosphate enzyme, central domain FY141_09145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY141_09145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY141_09155 PF01042 Endoribonuclease L-PSP FY141_09170 PF01476 LysM domain FY141_09170 PF03734 L,D-transpeptidase catalytic domain FY141_09175 PF07690 Major Facilitator Superfamily FY141_09195 PF10609 NUBPL iron-transfer P-loop NTPase FY141_09200 PF00465 Iron-containing alcohol dehydrogenase FY141_09205 PF00171 Aldehyde dehydrogenase family FY141_09210 PF03951 Glutamine synthetase, beta-Grasp domain FY141_09210 PF00120 Glutamine synthetase, catalytic domain FY141_09215 PF13520 Amino acid permease FY141_09225 PF01418 Helix-turn-helix domain, rpiR family FY141_09225 PF01380 SIS domain FY141_09230 PF13416 Bacterial extracellular solute-binding protein FY141_09245 PF00005 ABC transporter FY141_09245 PF08402 TOBE domain FY141_09250 PF00107 Zinc-binding dehydrogenase FY141_09250 PF08240 Alcohol dehydrogenase GroES-like domain FY141_09265 PF07690 Major Facilitator Superfamily FY141_09270 PF02607 B12 binding domain FY141_09270 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY141_09270 PF00809 Pterin binding enzyme FY141_09270 PF02574 Homocysteine S-methyltransferase FY141_09270 PF02310 B12 binding domain FY141_09290 PF13505 Outer membrane protein beta-barrel domain FY141_09305 PF04402 Protein of unknown function (DUF541) FY141_09315 PF01894 Uncharacterised protein family UPF0047 FY141_09320 PF00360 Phytochrome region FY141_09320 PF00512 His Kinase A (phospho-acceptor) domain FY141_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_09320 PF01590 GAF domain FY141_09320 PF08446 PAS fold FY141_09330 PF04546 Sigma-70, non-essential region FY141_09330 PF03979 Sigma-70 factor, region 1.1 FY141_09330 PF00140 Sigma-70 factor, region 1.2 FY141_09330 PF04542 Sigma-70 region 2 FY141_09330 PF04539 Sigma-70 region 3 FY141_09330 PF04545 Sigma-70, region 4 FY141_09335 PF10410 DnaB-helicase binding domain of primase FY141_09335 PF08278 DNA primase DnaG DnaB-binding FY141_09335 PF08275 DNA primase catalytic core, N-terminal domain FY141_09335 PF01807 CHC2 zinc finger FY141_09355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FY141_09355 PF00117 Glutamine amidotransferase class-I FY141_09360 PF01554 MatE FY141_09365 PF00672 HAMP domain FY141_09365 PF02743 Cache domain FY141_09365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_09375 PF04228 Putative neutral zinc metallopeptidase FY141_09390 PF02142 MGS-like domain FY141_09390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_09390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FY141_09400 PF07694 5TMR of 5TMR-LYT FY141_09400 PF00990 Diguanylate cyclase, GGDEF domain FY141_09415 PF03449 Transcription elongation factor, N-terminal FY141_09415 PF01272 Transcription elongation factor, GreA/GreB, C-term FY141_09420 PF00534 Glycosyl transferases group 1 FY141_09425 PF01037 Lrp/AsnC ligand binding domain FY141_09430 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_09435 PF03466 LysR substrate binding domain FY141_09445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY141_09460 PF03466 LysR substrate binding domain FY141_09460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_09470 PF01699 Sodium/calcium exchanger protein FY141_09475 PF00155 Aminotransferase class I and II FY141_09480 PF05231 MASE1 FY141_09480 PF00563 EAL domain FY141_09495 PF00313 'Cold-shock' DNA-binding domain FY141_09500 PF00753 Metallo-beta-lactamase superfamily FY141_09510 PF12802 MarR family FY141_09515 PF00072 Response regulator receiver domain FY141_09515 PF00486 Transcriptional regulatory protein, C terminal FY141_09520 PF00672 HAMP domain FY141_09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_09520 PF00512 His Kinase A (phospho-acceptor) domain FY141_09525 PF01588 Putative tRNA binding domain FY141_09530 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY141_09530 PF03807 NADP oxidoreductase coenzyme F420-dependent FY141_09545 PF01790 Prolipoprotein diacylglyceryl transferase FY141_09555 PF02578 Multi-copper polyphenol oxidoreductase laccase FY141_09570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FY141_09570 PF14572 Phosphoribosyl synthetase-associated domain FY141_09580 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FY141_09590 PF00535 Glycosyl transferase family 2 FY141_09595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_09595 PF00672 HAMP domain FY141_09600 PF00171 Aldehyde dehydrogenase family FY141_09605 PF02954 Bacterial regulatory protein, Fis family FY141_09610 PF00990 Diguanylate cyclase, GGDEF domain FY141_09610 PF13188 PAS domain FY141_09610 PF00563 EAL domain FY141_09610 PF03707 Bacterial signalling protein N terminal repeat FY141_09615 PF01386 Ribosomal L25p family FY141_09615 PF14693 Ribosomal protein TL5, C-terminal domain FY141_09620 PF00990 Diguanylate cyclase, GGDEF domain FY141_09620 PF08447 PAS fold FY141_09620 PF00563 EAL domain FY141_09620 PF08448 PAS fold FY141_09630 PF01195 Peptidyl-tRNA hydrolase FY141_09640 PF02617 ATP-dependent Clp protease adaptor protein ClpS FY141_09645 PF06071 Protein of unknown function (DUF933) FY141_09645 PF01926 50S ribosome-binding GTPase FY141_09665 PF00156 Phosphoribosyl transferase domain FY141_09675 PF00033 Cytochrome b/b6/petB FY141_09675 PF02167 Cytochrome C1 family FY141_09675 PF00032 Cytochrome b(C-terminal)/b6/petD FY141_09680 PF00033 Cytochrome b/b6/petB FY141_09680 PF00032 Cytochrome b(C-terminal)/b6/petD FY141_09685 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FY141_09685 PF00355 Rieske [2Fe-2S] domain FY141_09695 PF00664 ABC transporter transmembrane region FY141_09695 PF00005 ABC transporter FY141_09705 PF00005 ABC transporter FY141_09705 PF00664 ABC transporter transmembrane region FY141_09715 PF00588 SpoU rRNA Methylase family FY141_09720 PF02690 Na+/Pi-cotransporter FY141_09730 PF01218 Coproporphyrinogen III oxidase FY141_09745 PF01743 Poly A polymerase head domain FY141_09745 PF12627 Probable RNA and SrmB- binding site of polymerase A FY141_09745 PF13735 tRNA nucleotidyltransferase domain 2 putative FY141_09750 PF00293 NUDIX domain FY141_09760 PF07726 ATPase family associated with various cellular activities (AAA) FY141_09760 PF17863 AAA lid domain FY141_09780 PF00583 Acetyltransferase (GNAT) family FY141_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_09785 PF03466 LysR substrate binding domain FY141_09795 PF07690 Major Facilitator Superfamily FY141_09805 PF13409 Glutathione S-transferase, N-terminal domain FY141_09810 PF00293 NUDIX domain FY141_09820 PF00682 HMGL-like FY141_09820 PF08502 LeuA allosteric (dimerisation) domain FY141_09825 PF03594 Benzoate membrane transport protein FY141_09840 PF04542 Sigma-70 region 2 FY141_09840 PF04545 Sigma-70, region 4 FY141_09850 PF00574 Clp protease FY141_09855 PF04955 HupE / UreJ protein FY141_09865 PF14489 QueF-like protein FY141_09870 PF16916 Dimerisation domain of Zinc Transporter FY141_09870 PF01545 Cation efflux family FY141_09880 PF13458 Periplasmic binding protein FY141_09890 PF01022 Bacterial regulatory protein, arsR family FY141_09895 PF00005 ABC transporter FY141_09895 PF00571 CBS domain FY141_09900 PF00528 Binding-protein-dependent transport system inner membrane component FY141_09905 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY141_09915 PF00265 Thymidine kinase FY141_09920 PF00127 Copper binding proteins, plastocyanin/azurin family FY141_09930 PF03472 Autoinducer binding domain FY141_09930 PF00196 Bacterial regulatory proteins, luxR family FY141_09935 PF03350 Uncharacterized protein family, UPF0114 FY141_09940 PF07715 TonB-dependent Receptor Plug Domain FY141_09940 PF04886 PT repeat FY141_09940 PF00593 TonB dependent receptor FY141_09950 PF00425 chorismate binding enzyme FY141_09950 PF04715 Anthranilate synthase component I, N terminal region FY141_09950 PF00117 Glutamine amidotransferase class-I FY141_09960 PF11871 Domain of unknown function (DUF3391) FY141_09960 PF01966 HD domain FY141_09965 PF13382 Adenine deaminase C-terminal domain FY141_09965 PF01979 Amidohydrolase family FY141_09970 PF00583 Acetyltransferase (GNAT) family FY141_09975 PF00128 Alpha amylase, catalytic domain FY141_09980 PF00294 pfkB family carbohydrate kinase FY141_10000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FY141_10000 PF01926 50S ribosome-binding GTPase FY141_10020 PF05992 SbmA/BacA-like family FY141_10030 PF00557 Metallopeptidase family M24 FY141_10045 PF01799 [2Fe-2S] binding domain FY141_10045 PF00111 2Fe-2S iron-sulfur cluster binding domain FY141_10050 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FY141_10050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FY141_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10060 PF03466 LysR substrate binding domain FY141_10075 PF01979 Amidohydrolase family FY141_10085 PF01070 FMN-dependent dehydrogenase FY141_10090 PF00893 Small Multidrug Resistance protein FY141_10095 PF00440 Bacterial regulatory proteins, tetR family FY141_10095 PF17932 Tetracyclin repressor-like, C-terminal domain FY141_10100 PF00768 D-alanyl-D-alanine carboxypeptidase FY141_10100 PF07943 Penicillin-binding protein 5, C-terminal domain FY141_10110 PF00576 HIUase/Transthyretin family FY141_10115 PF04115 Ureidoglycolate lyase FY141_10130 PF09349 OHCU decarboxylase FY141_10130 PF01014 Uricase FY141_10140 PF06299 Protein of unknown function (DUF1045) FY141_10145 PF01266 FAD dependent oxidoreductase FY141_10150 PF01266 FAD dependent oxidoreductase FY141_10150 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY141_10155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FY141_10155 PF00072 Response regulator receiver domain FY141_10155 PF01627 Hpt domain FY141_10155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_10155 PF00672 HAMP domain FY141_10155 PF00512 His Kinase A (phospho-acceptor) domain FY141_10160 PF00270 DEAD/DEAH box helicase FY141_10160 PF00271 Helicase conserved C-terminal domain FY141_10170 PF07681 DoxX FY141_10175 PF01476 LysM domain FY141_10175 PF03734 L,D-transpeptidase catalytic domain FY141_10185 PF14403 Circularly permuted ATP-grasp type 2 FY141_10195 PF01841 Transglutaminase-like superfamily FY141_10195 PF08379 Bacterial transglutaminase-like N-terminal region FY141_10220 PF02653 Branched-chain amino acid transport system / permease component FY141_10225 PF00005 ABC transporter FY141_10230 PF13407 Periplasmic binding protein domain FY141_10235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10235 PF03466 LysR substrate binding domain FY141_10285 PF03743 Bacterial conjugation TrbI-like protein FY141_10295 PF04335 VirB8 protein FY141_10300 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY141_10315 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY141_10330 PF00437 Type II/IV secretion system protein FY141_10340 PF02534 Type IV secretory system Conjugative DNA transfer FY141_10350 PF01381 Helix-turn-helix FY141_10355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10355 PF03466 LysR substrate binding domain FY141_10360 PF02321 Outer membrane efflux protein FY141_10365 PF13533 Biotin-lipoyl like FY141_10380 PF02311 AraC-like ligand binding domain FY141_10380 PF12833 Helix-turn-helix domain FY141_10395 PF03466 LysR substrate binding domain FY141_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10405 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FY141_10405 PF00753 Metallo-beta-lactamase superfamily FY141_10405 PF10996 Beta-Casp domain FY141_10420 PF03466 LysR substrate binding domain FY141_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10430 PF01464 Transglycosylase SLT domain FY141_10455 PF13614 AAA domain FY141_10475 PF06067 Domain of unknown function (DUF932) FY141_10490 PF07690 Major Facilitator Superfamily FY141_10495 PF03466 LysR substrate binding domain FY141_10495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10500 PF05284 Protein of unknown function (DUF736) FY141_10515 PF02463 RecF/RecN/SMC N terminal domain FY141_10545 PF00271 Helicase conserved C-terminal domain FY141_10560 PF00270 DEAD/DEAH box helicase FY141_10560 PF00271 Helicase conserved C-terminal domain FY141_10560 PF09382 RQC domain FY141_10560 PF00570 HRDC domain FY141_10560 PF16124 RecQ zinc-binding FY141_10565 PF02661 Fic/DOC family FY141_10565 PF13784 Fic/DOC family N-terminal FY141_10580 PF03358 NADPH-dependent FMN reductase FY141_10585 PF00561 alpha/beta hydrolase fold FY141_10605 PF13533 Biotin-lipoyl like FY141_10610 PF03466 LysR substrate binding domain FY141_10610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY141_10620 PF03466 LysR substrate binding domain FY141_10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10635 PF00857 Isochorismatase family FY141_10640 PF03466 LysR substrate binding domain FY141_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_10645 PF00004 ATPase family associated with various cellular activities (AAA) FY141_10645 PF17862 AAA+ lid domain FY141_10645 PF01434 Peptidase family M41 FY141_10655 PF00665 Integrase core domain FY141_10660 PF01695 IstB-like ATP binding protein FY141_10670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_10670 PF00672 HAMP domain FY141_10675 PF07690 Major Facilitator Superfamily FY141_10685 PF02607 B12 binding domain FY141_10685 PF02965 Vitamin B12 dependent methionine synthase, activation domain FY141_10685 PF00809 Pterin binding enzyme FY141_10685 PF02574 Homocysteine S-methyltransferase FY141_10685 PF02310 B12 binding domain FY141_10690 PF00528 Binding-protein-dependent transport system inner membrane component FY141_10695 PF00528 Binding-protein-dependent transport system inner membrane component FY141_10700 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_10705 PF00005 ABC transporter FY141_10725 PF00331 Glycosyl hydrolase family 10 FY141_10730 PF00535 Glycosyl transferase family 2 FY141_10745 PF03808 Glycosyl transferase WecB/TagA/CpsF family FY141_10760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY141_10760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY141_10760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY141_10760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY141_10775 PF01152 Bacterial-like globin FY141_10795 PF00440 Bacterial regulatory proteins, tetR family FY141_10795 PF08362 YcdC-like protein, C-terminal region FY141_10800 PF01546 Peptidase family M20/M25/M40 FY141_10800 PF07687 Peptidase dimerisation domain FY141_10805 PF01979 Amidohydrolase family FY141_10810 PF00293 NUDIX domain FY141_10815 PF00005 ABC transporter FY141_10820 PF00528 Binding-protein-dependent transport system inner membrane component FY141_10825 PF00528 Binding-protein-dependent transport system inner membrane component FY141_10840 PF00873 AcrB/AcrD/AcrF family FY141_10855 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY141_10860 PF01730 UreF FY141_10865 PF05194 UreE urease accessory protein, C-terminal domain FY141_10865 PF02814 UreE urease accessory protein, N-terminal domain FY141_10870 PF08534 Redoxin FY141_10880 PF01979 Amidohydrolase family FY141_10880 PF00449 Urease alpha-subunit, N-terminal domain FY141_10890 PF07007 Lysozyme inhibitor LprI FY141_10900 PF00699 Urease beta subunit FY141_10905 PF06906 Protein of unknown function (DUF1272) FY141_10910 PF00547 Urease, gamma subunit FY141_10915 PF01774 UreD urease accessory protein FY141_10925 PF00005 ABC transporter FY141_10935 PF00005 ABC transporter FY141_10935 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_10945 PF02653 Branched-chain amino acid transport system / permease component FY141_10955 PF10931 Protein of unknown function (DUF2735) FY141_10960 PF03951 Glutamine synthetase, beta-Grasp domain FY141_10960 PF00120 Glutamine synthetase, catalytic domain FY141_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_10970 PF00512 His Kinase A (phospho-acceptor) domain FY141_10970 PF18415 Histidine kinase receptor ArcB trans-membrane domain FY141_10970 PF00989 PAS fold FY141_10970 PF00072 Response regulator receiver domain FY141_10970 PF01627 Hpt domain FY141_10975 PF00072 Response regulator receiver domain FY141_10985 PF01522 Polysaccharide deacetylase FY141_10985 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FY141_10990 PF13458 Periplasmic binding protein FY141_11000 PF00005 ABC transporter FY141_11005 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_11005 PF00005 ABC transporter FY141_11010 PF11862 Domain of unknown function (DUF3382) FY141_11010 PF02653 Branched-chain amino acid transport system / permease component FY141_11015 PF02653 Branched-chain amino acid transport system / permease component FY141_11020 PF00459 Inositol monophosphatase family FY141_11050 PF00072 Response regulator receiver domain FY141_11050 PF00486 Transcriptional regulatory protein, C terminal FY141_11070 PF10090 Histidine phosphotransferase C-terminal domain FY141_11085 PF00588 SpoU rRNA Methylase family FY141_11095 PF00849 RNA pseudouridylate synthase FY141_11105 PF00140 Sigma-70 factor, region 1.2 FY141_11105 PF04542 Sigma-70 region 2 FY141_11105 PF04545 Sigma-70, region 4 FY141_11115 PF00709 Adenylosuccinate synthetase FY141_11140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_11150 PF03167 Uracil DNA glycosylase superfamily FY141_11155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_11160 PF04304 Protein of unknown function (DUF454) FY141_11165 PF00005 ABC transporter FY141_11170 PF01032 FecCD transport family FY141_11175 PF01497 Periplasmic binding protein FY141_11185 PF06228 Haem utilisation ChuX/HutX FY141_11200 PF13443 Cro/C1-type HTH DNA-binding domain FY141_11210 PF00551 Formyl transferase FY141_11225 PF00672 HAMP domain FY141_11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_11225 PF00512 His Kinase A (phospho-acceptor) domain FY141_11230 PF00072 Response regulator receiver domain FY141_11230 PF00486 Transcriptional regulatory protein, C terminal FY141_11240 PF03401 Tripartite tricarboxylate transporter family receptor FY141_11250 PF01970 Tripartite tricarboxylate transporter TctA family FY141_11265 PF01032 FecCD transport family FY141_11270 PF01032 FecCD transport family FY141_11275 PF00005 ABC transporter FY141_11280 PF00210 Ferritin-like domain FY141_11295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_11295 PF00672 HAMP domain FY141_11300 PF00248 Aldo/keto reductase family FY141_11305 PF07690 Major Facilitator Superfamily FY141_11310 PF03466 LysR substrate binding domain FY141_11310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_11315 PF03466 LysR substrate binding domain FY141_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_11320 PF07859 alpha/beta hydrolase fold FY141_11325 PF13533 Biotin-lipoyl like FY141_11330 PF00873 AcrB/AcrD/AcrF family FY141_11345 PF13396 Phospholipase_D-nuclease N-terminal FY141_11345 PF13091 PLD-like domain FY141_11350 PF08543 Phosphomethylpyrimidine kinase FY141_11355 PF00484 Carbonic anhydrase FY141_11365 PF01118 Semialdehyde dehydrogenase, NAD binding domain FY141_11365 PF02774 Semialdehyde dehydrogenase, dimerisation domain FY141_11375 PF00083 Sugar (and other) transporter FY141_11380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FY141_11380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FY141_11380 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FY141_11385 PF02233 NAD(P) transhydrogenase beta subunit FY141_11390 PF01613 Flavin reductase like domain FY141_11395 PF00881 Nitroreductase family FY141_11400 PF00561 alpha/beta hydrolase fold FY141_11405 PF01042 Endoribonuclease L-PSP FY141_11410 PF00857 Isochorismatase family FY141_11415 PF00296 Luciferase-like monooxygenase FY141_11420 PF01126 Heme oxygenase FY141_11425 PF00701 Dihydrodipicolinate synthetase family FY141_11430 PF07729 FCD domain FY141_11430 PF00392 Bacterial regulatory proteins, gntR family FY141_11440 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11445 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11450 PF03459 TOBE domain FY141_11450 PF17912 MalK OB fold domain FY141_11450 PF00005 ABC transporter FY141_11455 PF00294 pfkB family carbohydrate kinase FY141_11460 PF03576 Peptidase family S58 FY141_11465 PF01063 Amino-transferase class IV FY141_11470 PF03466 LysR substrate binding domain FY141_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_11475 PF00144 Beta-lactamase FY141_11480 PF00005 ABC transporter FY141_11480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_11485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_11485 PF00005 ABC transporter FY141_11490 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_11490 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11495 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_11505 PF01244 Membrane dipeptidase (Peptidase family M19) FY141_11515 PF09924 Uncharacterised conserved protein (DUF2156) FY141_11515 PF03706 Lysylphosphatidylglycerol synthase TM region FY141_11530 PF07690 Major Facilitator Superfamily FY141_11540 PF04444 Catechol dioxygenase N terminus FY141_11540 PF00775 Dioxygenase FY141_11545 PF00465 Iron-containing alcohol dehydrogenase FY141_11550 PF04909 Amidohydrolase FY141_11555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_11555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY141_11560 PF01613 Flavin reductase like domain FY141_11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_11580 PF00512 His Kinase A (phospho-acceptor) domain FY141_11585 PF00486 Transcriptional regulatory protein, C terminal FY141_11585 PF00072 Response regulator receiver domain FY141_11595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY141_11600 PF00005 ABC transporter FY141_11600 PF08402 TOBE domain FY141_11605 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11620 PF00486 Transcriptional regulatory protein, C terminal FY141_11620 PF00072 Response regulator receiver domain FY141_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_11625 PF13188 PAS domain FY141_11625 PF00072 Response regulator receiver domain FY141_11625 PF08448 PAS fold FY141_11625 PF00512 His Kinase A (phospho-acceptor) domain FY141_11630 PF00202 Aminotransferase class-III FY141_11635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_11635 PF03466 LysR substrate binding domain FY141_11640 PF00313 'Cold-shock' DNA-binding domain FY141_11680 PF01259 SAICAR synthetase FY141_11685 PF00440 Bacterial regulatory proteins, tetR family FY141_11690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_11690 PF00529 HlyD membrane-fusion protein of T1SS FY141_11695 PF00873 AcrB/AcrD/AcrF family FY141_11700 PF02321 Outer membrane efflux protein FY141_11705 PF08207 Elongation factor P (EF-P) KOW-like domain FY141_11705 PF01132 Elongation factor P (EF-P) OB domain FY141_11705 PF09285 Elongation factor P, C-terminal FY141_11710 PF00152 tRNA synthetases class II (D, K and N) FY141_11715 PF04055 Radical SAM superfamily FY141_11715 PF12544 Lysine-2,3-aminomutase FY141_11730 PF03466 LysR substrate binding domain FY141_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_11735 PF01266 FAD dependent oxidoreductase FY141_11745 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11750 PF03459 TOBE domain FY141_11750 PF00005 ABC transporter FY141_11760 PF03576 Peptidase family S58 FY141_11765 PF05690 Thiazole biosynthesis protein ThiG FY141_11775 PF01266 FAD dependent oxidoreductase FY141_11780 PF13667 ThiC-associated domain FY141_11780 PF01964 Radical SAM ThiC family FY141_11790 PF00550 Phosphopantetheine attachment site FY141_11820 PF00664 ABC transporter transmembrane region FY141_11820 PF00005 ABC transporter FY141_11825 PF00027 Cyclic nucleotide-binding domain FY141_11825 PF13545 Crp-like helix-turn-helix domain FY141_11835 PF00211 Adenylate and Guanylate cyclase catalytic domain FY141_11835 PF00672 HAMP domain FY141_11845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY141_11845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY141_11845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY141_11850 PF00534 Glycosyl transferases group 1 FY141_11850 PF13439 Glycosyltransferase Family 4 FY141_11865 PF00005 ABC transporter FY141_11865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_11870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_11875 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11880 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11880 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_11895 PF04101 Glycosyltransferase family 28 C-terminal domain FY141_11895 PF03033 Glycosyltransferase family 28 N-terminal domain FY141_11900 PF03932 CutC family FY141_11905 PF07690 Major Facilitator Superfamily FY141_11915 PF00728 Glycosyl hydrolase family 20, catalytic domain FY141_11915 PF02838 Glycosyl hydrolase family 20, domain 2 FY141_11925 PF01380 SIS domain FY141_11925 PF01418 Helix-turn-helix domain, rpiR family FY141_11935 PF00005 ABC transporter FY141_11935 PF17912 MalK OB fold domain FY141_11940 PF01547 Bacterial extracellular solute-binding protein FY141_11945 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11950 PF00528 Binding-protein-dependent transport system inner membrane component FY141_11965 PF00392 Bacterial regulatory proteins, gntR family FY141_11965 PF07702 UTRA domain FY141_11970 PF01380 SIS domain FY141_11975 PF01979 Amidohydrolase family FY141_11980 PF00480 ROK family FY141_11985 PF01494 FAD binding domain FY141_11990 PF01569 PAP2 superfamily FY141_11995 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FY141_11995 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FY141_11995 PF13288 DXP reductoisomerase C-terminal domain FY141_12000 PF00155 Aminotransferase class I and II FY141_12010 PF01103 Surface antigen FY141_12010 PF17243 POTRA domain TamA domain 1 FY141_12010 PF07244 Surface antigen variable number repeat FY141_12020 PF01584 CheW-like domain FY141_12025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_12025 PF08447 PAS fold FY141_12025 PF13426 PAS domain FY141_12030 PF02634 FdhD/NarQ family FY141_12035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FY141_12040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY141_12040 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY141_12045 PF00231 ATP synthase FY141_12050 PF02874 ATP synthase alpha/beta family, beta-barrel domain FY141_12050 PF00306 ATP synthase alpha/beta chain, C terminal domain FY141_12050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY141_12055 PF00213 ATP synthase delta (OSCP) subunit FY141_12065 PF00270 DEAD/DEAH box helicase FY141_12065 PF17764 3′ DNA-binding domain (3′BD) FY141_12065 PF18074 Primosomal protein N C-terminal domain FY141_12065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FY141_12070 PF02899 Phage integrase, N-terminal SAM-like domain FY141_12070 PF00589 Phage integrase family FY141_12090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FY141_12090 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_12095 PF01810 LysE type translocator FY141_12105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY141_12105 PF02817 e3 binding domain FY141_12105 PF00364 Biotin-requiring enzyme FY141_12110 PF02779 Transketolase, pyrimidine binding domain FY141_12110 PF16870 2-oxoglutarate dehydrogenase C-terminal FY141_12110 PF00676 Dehydrogenase E1 component FY141_12110 PF16078 2-oxoglutarate dehydrogenase N-terminus FY141_12115 PF00549 CoA-ligase FY141_12115 PF02629 CoA binding domain FY141_12120 PF08442 ATP-grasp domain FY141_12120 PF00549 CoA-ligase FY141_12125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FY141_12125 PF00056 lactate/malate dehydrogenase, NAD binding domain FY141_12130 PF03969 AFG1-like ATPase FY141_12135 PF02974 Protease inhibitor Inh FY141_12140 PF13085 2Fe-2S iron-sulfur cluster binding domain FY141_12140 PF13237 4Fe-4S dicluster domain FY141_12145 PF00890 FAD binding domain FY141_12145 PF02910 Fumarate reductase flavoprotein C-term FY141_12155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FY141_12180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FY141_12180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FY141_12185 PF00814 Glycoprotease family FY141_12190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FY141_12190 PF03900 Porphobilinogen deaminase, C-terminal domain FY141_12215 PF00117 Glutamine amidotransferase class-I FY141_12225 PF02325 YGGT family FY141_12230 PF02594 Uncharacterised ACR, YggU family COG1872 FY141_12235 PF00719 Inorganic pyrophosphatase FY141_12245 PF00679 Elongation factor G C-terminus FY141_12245 PF00009 Elongation factor Tu GTP binding domain FY141_12245 PF03144 Elongation factor Tu domain 2 FY141_12250 PF01432 Peptidase family M3 FY141_12255 PF01047 MarR family FY141_12260 PF07690 Major Facilitator Superfamily FY141_12265 PF00764 Arginosuccinate synthase FY141_12270 PF00106 short chain dehydrogenase FY141_12275 PF01810 LysE type translocator FY141_12280 PF00005 ABC transporter FY141_12285 PF02653 Branched-chain amino acid transport system / permease component FY141_12295 PF04055 Radical SAM superfamily FY141_12310 PF01329 Pterin 4 alpha carbinolamine dehydratase FY141_12315 PF01451 Low molecular weight phosphotyrosine protein phosphatase FY141_12320 PF02834 LigT like Phosphoesterase FY141_12325 PF13472 GDSL-like Lipase/Acylhydrolase family FY141_12330 PF00005 ABC transporter FY141_12340 PF01027 Inhibitor of apoptosis-promoting Bax1 FY141_12355 PF00330 Aconitase family (aconitate hydratase) FY141_12355 PF00694 Aconitase C-terminal domain FY141_12360 PF00005 ABC transporter FY141_12365 PF03379 CcmB protein FY141_12370 PF01578 Cytochrome C assembly protein FY141_12380 PF08534 Redoxin FY141_12385 PF00990 Diguanylate cyclase, GGDEF domain FY141_12390 PF10755 Protein of unknown function (DUF2585) FY141_12395 PF04279 Intracellular septation protein A FY141_12400 PF00448 SRP54-type protein, GTPase domain FY141_12400 PF02881 SRP54-type protein, helical bundle domain FY141_12405 PF04055 Radical SAM superfamily FY141_12405 PF00919 Uncharacterized protein family UPF0004 FY141_12410 PF01678 Diaminopimelate epimerase FY141_12415 PF12706 Beta-lactamase superfamily domain FY141_12425 PF00448 SRP54-type protein, GTPase domain FY141_12425 PF02881 SRP54-type protein, helical bundle domain FY141_12425 PF02978 Signal peptide binding domain FY141_12430 PF01817 Chorismate mutase type II FY141_12430 PF02153 Prephenate dehydrogenase FY141_12435 PF00886 Ribosomal protein S16 FY141_12440 PF01782 RimM N-terminal domain FY141_12440 PF05239 PRC-barrel domain FY141_12445 PF01746 tRNA (Guanine-1)-methyltransferase FY141_12455 PF01245 Ribosomal protein L19 FY141_12460 PF00664 ABC transporter transmembrane region FY141_12460 PF00005 ABC transporter FY141_12465 PF00529 HlyD membrane-fusion protein of T1SS FY141_12465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_12475 PF07690 Major Facilitator Superfamily FY141_12480 PF00330 Aconitase family (aconitate hydratase) FY141_12495 PF01435 Peptidase family M48 FY141_12500 PF00005 ABC transporter FY141_12505 PF00528 Binding-protein-dependent transport system inner membrane component FY141_12510 PF01547 Bacterial extracellular solute-binding protein FY141_12520 PF00005 ABC transporter FY141_12520 PF16326 ABC transporter C-terminal domain FY141_12530 PF04204 Homoserine O-succinyltransferase FY141_12535 PF01263 Aldose 1-epimerase FY141_12540 PF00912 Transglycosylase FY141_12545 PF00348 Polyprenyl synthetase FY141_12550 PF13488 Glycine zipper FY141_12550 PF00691 OmpA family FY141_12555 PF04551 GcpE protein FY141_12560 PF07690 Major Facilitator Superfamily FY141_12565 PF00455 DeoR C terminal sensor domain FY141_12565 PF08220 DeoR-like helix-turn-helix domain FY141_12570 PF00289 Biotin carboxylase, N-terminal domain FY141_12570 PF02785 Biotin carboxylase C-terminal domain FY141_12570 PF02436 Conserved carboxylase domain FY141_12570 PF00682 HMGL-like FY141_12570 PF00364 Biotin-requiring enzyme FY141_12570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_12575 PF00196 Bacterial regulatory proteins, luxR family FY141_12575 PF00072 Response regulator receiver domain FY141_12580 PF00664 ABC transporter transmembrane region FY141_12580 PF00005 ABC transporter FY141_12590 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FY141_12590 PF06165 Glycosyltransferase family 36 FY141_12590 PF10091 Putative glucoamylase FY141_12595 PF07687 Peptidase dimerisation domain FY141_12595 PF01546 Peptidase family M20/M25/M40 FY141_12600 PF01266 FAD dependent oxidoreductase FY141_12605 PF00291 Pyridoxal-phosphate dependent enzyme FY141_12610 PF00920 Dehydratase family FY141_12615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY141_12615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY141_12620 PF01370 NAD dependent epimerase/dehydratase family FY141_12625 PF01565 FAD binding domain FY141_12625 PF02913 FAD linked oxidases, C-terminal domain FY141_12630 PF07729 FCD domain FY141_12630 PF00392 Bacterial regulatory proteins, gntR family FY141_12640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY141_12645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY141_12650 PF03480 Bacterial extracellular solute-binding protein, family 7 FY141_12655 PF13193 AMP-binding enzyme C-terminal domain FY141_12655 PF16177 Acetyl-coenzyme A synthetase N-terminus FY141_12655 PF00501 AMP-binding enzyme FY141_12665 PF01168 Alanine racemase, N-terminal domain FY141_12670 PF08264 Anticodon-binding domain of tRNA FY141_12670 PF13603 Leucyl-tRNA synthetase, Domain 2 FY141_12670 PF00133 tRNA synthetases class I (I, L, M and V) FY141_12685 PF11953 Domain of unknown function (DUF3470) FY141_12685 PF00037 4Fe-4S binding domain FY141_12690 PF00579 tRNA synthetases class I (W and Y) FY141_12690 PF01479 S4 domain FY141_12705 PF01494 FAD binding domain FY141_12715 PF00543 Nitrogen regulatory protein P-II FY141_12720 PF00909 Ammonium Transporter Family FY141_12725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY141_12725 PF17854 FtsK alpha domain FY141_12725 PF09397 Ftsk gamma domain FY141_12725 PF01580 FtsK/SpoIIIE family FY141_12730 PF03548 Outer membrane lipoprotein carrier protein LolA FY141_12745 PF00072 Response regulator receiver domain FY141_12745 PF00486 Transcriptional regulatory protein, C terminal FY141_12755 PF02559 CarD-like/TRCF domain FY141_12760 PF05088 Bacterial NAD-glutamate dehydrogenase FY141_12765 PF11700 Vacuole effluxer Atg22 like FY141_12770 PF07879 PHB/PHA accumulation regulator DNA-binding domain FY141_12770 PF05233 PHB accumulation regulatory domain FY141_12775 PF00108 Thiolase, N-terminal domain FY141_12775 PF02803 Thiolase, C-terminal domain FY141_12790 PF00210 Ferritin-like domain FY141_12795 PF00293 NUDIX domain FY141_12800 PF04748 Divergent polysaccharide deacetylase FY141_12805 PF03572 Peptidase family S41 FY141_12805 PF13180 PDZ domain FY141_12815 PF02590 Predicted SPOUT methyltransferase FY141_12825 PF01467 Cytidylyltransferase-like FY141_12830 PF00171 Aldehyde dehydrogenase family FY141_12835 PF00696 Amino acid kinase family FY141_12835 PF01472 PUA domain FY141_12840 PF01018 GTP1/OBG FY141_12840 PF01926 50S ribosome-binding GTPase FY141_12845 PF13302 Acetyltransferase (GNAT) domain FY141_12855 PF01016 Ribosomal L27 protein FY141_12860 PF00829 Ribosomal prokaryotic L21 protein FY141_12875 PF03328 HpcH/HpaI aldolase/citrate lyase family FY141_12885 PF00694 Aconitase C-terminal domain FY141_12890 PF00180 Isocitrate/isopropylmalate dehydrogenase FY141_12895 PF03150 Di-haem cytochrome c peroxidase FY141_12900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY141_12900 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY141_12905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_12910 PF01888 CbiD FY141_12915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_12925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_12930 PF02571 Precorrin-6x reductase CbiJ/CobK FY141_12935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_12940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_12945 PF02570 Precorrin-8X methylmutase FY141_12950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY141_12955 PF02514 CobN/Magnesium Chelatase FY141_12960 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY141_12960 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY141_12970 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FY141_12970 PF12557 Cob(I)alamin adenosyltransferase N terminal FY141_12975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY141_12975 PF07685 CobB/CobQ-like glutamine amidotransferase domain FY141_12980 PF03186 CobD/Cbib protein FY141_12985 PF00155 Aminotransferase class I and II FY141_12990 PF13378 Enolase C-terminal domain-like FY141_12990 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_12995 PF05336 L-rhamnose mutarotase FY141_13000 PF01232 Mannitol dehydrogenase Rossmann domain FY141_13000 PF08125 Mannitol dehydrogenase C-terminal domain FY141_13005 PF00107 Zinc-binding dehydrogenase FY141_13005 PF08240 Alcohol dehydrogenase GroES-like domain FY141_13015 PF00248 Aldo/keto reductase family FY141_13025 PF02653 Branched-chain amino acid transport system / permease component FY141_13030 PF00005 ABC transporter FY141_13035 PF07729 FCD domain FY141_13035 PF00392 Bacterial regulatory proteins, gntR family FY141_13040 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FY141_13040 PF08666 SAF domain FY141_13045 PF01808 AICARFT/IMPCHase bienzyme FY141_13045 PF02142 MGS-like domain FY141_13055 PF01189 16S rRNA methyltransferase RsmB/F FY141_13055 PF01029 NusB family FY141_13060 PF01435 Peptidase family M48 FY141_13070 PF17762 HTH domain found in ParB protein FY141_13070 PF02195 ParB-like nuclease domain FY141_13075 PF13614 AAA domain FY141_13080 PF02527 rRNA small subunit methyltransferase G FY141_13085 PF01134 Glucose inhibited division protein A FY141_13085 PF13932 GidA associated domain FY141_13090 PF01926 50S ribosome-binding GTPase FY141_13090 PF12631 MnmE helical domain FY141_13090 PF10396 GTP-binding protein TrmE N-terminus FY141_13095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FY141_13095 PF07498 Rho termination factor, N-terminal domain FY141_13095 PF07497 Rho termination factor, RNA-binding domain FY141_13100 PF03653 Uncharacterised protein family (UPF0093) FY141_13105 PF01208 Uroporphyrinogen decarboxylase (URO-D) FY141_13110 PF03618 Kinase/pyrophosphorylase FY141_13115 PF02545 Maf-like protein FY141_13120 PF01488 Shikimate / quinate 5-dehydrogenase FY141_13120 PF08501 Shikimate dehydrogenase substrate binding domain FY141_13120 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY141_13125 PF01121 Dephospho-CoA kinase FY141_13130 PF00929 Exonuclease FY141_13135 PF02556 Preprotein translocase subunit SecB FY141_13140 PF04186 FxsA cytoplasmic membrane protein FY141_13150 PF06725 3D domain FY141_13150 PF03562 MltA specific insert domain FY141_13165 PF00204 DNA gyrase B FY141_13165 PF00986 DNA gyrase B subunit, carboxyl terminus FY141_13165 PF01751 Toprim domain FY141_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_13175 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY141_13190 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FY141_13195 PF00291 Pyridoxal-phosphate dependent enzyme FY141_13200 PF00290 Tryptophan synthase alpha chain FY141_13205 PF01039 Carboxyl transferase domain FY141_13210 PF02875 Mur ligase family, glutamate ligase domain FY141_13210 PF08245 Mur ligase middle domain FY141_13215 PF00085 Thioredoxin FY141_13220 PF00580 UvrD/REP helicase N-terminal domain FY141_13220 PF13361 UvrD-like helicase C-terminal domain FY141_13220 PF12705 PD-(D/E)XK nuclease superfamily FY141_13230 PF12804 MobA-like NTP transferase domain FY141_13235 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FY141_13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_13240 PF00512 His Kinase A (phospho-acceptor) domain FY141_13245 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FY141_13245 PF05221 S-adenosyl-L-homocysteine hydrolase FY141_13250 PF00381 PTS HPr component phosphorylation site FY141_13255 PF03610 PTS system fructose IIA component FY141_13255 PF03830 PTS system sorbose subfamily IIB component FY141_13260 PF07475 HPr Serine kinase C-terminal domain FY141_13260 PF02603 HPr Serine kinase N terminus FY141_13265 PF13756 Stimulus-sensing domain FY141_13265 PF00512 His Kinase A (phospho-acceptor) domain FY141_13265 PF13755 Sensor N-terminal transmembrane domain FY141_13265 PF00672 HAMP domain FY141_13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_13270 PF00072 Response regulator receiver domain FY141_13270 PF00486 Transcriptional regulatory protein, C terminal FY141_13275 PF01293 Phosphoenolpyruvate carboxykinase FY141_13280 PF00472 RF-1 domain FY141_13285 PF01476 LysM domain FY141_13285 PF04972 BON domain FY141_13290 PF00485 Phosphoribulokinase / Uridine kinase family FY141_13295 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FY141_13300 PF00977 Histidine biosynthesis protein FY141_13305 PF00977 Histidine biosynthesis protein FY141_13310 PF00117 Glutamine amidotransferase class-I FY141_13320 PF00475 Imidazoleglycerol-phosphate dehydratase FY141_13325 PF00227 Proteasome subunit FY141_13330 PF00004 ATPase family associated with various cellular activities (AAA) FY141_13330 PF07724 AAA domain (Cdc48 subfamily) FY141_13330 PF10431 C-terminal, D2-small domain, of ClpB protein FY141_13340 PF01274 Malate synthase FY141_13355 PF00072 Response regulator receiver domain FY141_13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_13360 PF00512 His Kinase A (phospho-acceptor) domain FY141_13365 PF00270 DEAD/DEAH box helicase FY141_13365 PF04408 Helicase associated domain (HA2) FY141_13365 PF00271 Helicase conserved C-terminal domain FY141_13365 PF08482 ATP-dependent helicase C-terminal FY141_13405 PF09382 RQC domain FY141_13405 PF16124 RecQ zinc-binding FY141_13405 PF00270 DEAD/DEAH box helicase FY141_13405 PF00271 Helicase conserved C-terminal domain FY141_13405 PF00570 HRDC domain FY141_13410 PF00480 ROK family FY141_13415 PF13407 Periplasmic binding protein domain FY141_13420 PF02653 Branched-chain amino acid transport system / permease component FY141_13425 PF00005 ABC transporter FY141_13430 PF00485 Phosphoribulokinase / Uridine kinase family FY141_13435 PF00462 Glutaredoxin FY141_13440 PF07972 NrdI Flavodoxin like FY141_13445 PF02867 Ribonucleotide reductase, barrel domain FY141_13445 PF00317 Ribonucleotide reductase, all-alpha domain FY141_13445 PF08343 Ribonucleotide reductase N-terminal FY141_13450 PF00268 Ribonucleotide reductase, small chain FY141_13460 PF02463 RecF/RecN/SMC N terminal domain FY141_13465 PF00899 ThiF family FY141_13465 PF00581 Rhodanese-like domain FY141_13480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_13480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_13490 PF00294 pfkB family carbohydrate kinase FY141_13500 PF05175 Methyltransferase small domain FY141_13500 PF08468 Methyltransferase small domain N-terminal FY141_13505 PF03725 3' exoribonuclease family, domain 2 FY141_13505 PF00013 KH domain FY141_13505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FY141_13505 PF01138 3' exoribonuclease family, domain 1 FY141_13505 PF00575 S1 RNA binding domain FY141_13510 PF00312 Ribosomal protein S15 FY141_13515 PF16198 tRNA pseudouridylate synthase B C-terminal domain FY141_13515 PF01509 TruB family pseudouridylate synthase (N terminal domain) FY141_13515 PF09157 Pseudouridine synthase II TruB, C-terminal FY141_13520 PF02033 Ribosome-binding factor A FY141_13525 PF00009 Elongation factor Tu GTP binding domain FY141_13525 PF03144 Elongation factor Tu domain 2 FY141_13525 PF11987 Translation-initiation factor 2 FY141_13525 PF08364 Bacterial translation initiation factor IF-2 associated region FY141_13525 PF04760 Translation initiation factor IF-2, N-terminal region FY141_13535 PF00575 S1 RNA binding domain FY141_13535 PF08529 NusA N-terminal domain FY141_13535 PF13184 NusA-like KH domain FY141_13540 PF02576 RimP N-terminal domain FY141_13540 PF17384 RimP C-terminal SH3 domain FY141_13545 PF05977 Transmembrane secretion effector FY141_13555 PF13406 Transglycosylase SLT domain FY141_13560 PF13662 Toprim domain FY141_13560 PF02132 RecR protein FY141_13570 PF02575 YbaB/EbfC DNA-binding family FY141_13575 PF12169 DNA polymerase III subunits gamma and tau domain III FY141_13575 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FY141_13575 PF12170 DNA polymerase III tau subunit V interacting with alpha FY141_13590 PF00293 NUDIX domain FY141_13590 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FY141_13590 PF09297 NADH pyrophosphatase zinc ribbon domain FY141_13595 PF00800 Prephenate dehydratase FY141_13595 PF01817 Chorismate mutase type II FY141_13600 PF02348 Cytidylyltransferase FY141_13605 PF00034 Cytochrome c FY141_13610 PF02397 Bacterial sugar transferase FY141_13615 PF00905 Penicillin binding protein transpeptidase domain FY141_13615 PF00912 Transglycosylase FY141_13620 PF04073 Aminoacyl-tRNA editing domain FY141_13625 PF00313 'Cold-shock' DNA-binding domain FY141_13630 PF07687 Peptidase dimerisation domain FY141_13630 PF01546 Peptidase family M20/M25/M40 FY141_13635 PF01047 MarR family FY141_13640 PF01367 5'-3' exonuclease, C-terminal SAM fold FY141_13640 PF01612 3'-5' exonuclease FY141_13640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FY141_13640 PF00476 DNA polymerase family A FY141_13645 PF01783 Ribosomal L32p protein family FY141_13650 PF00512 His Kinase A (phospho-acceptor) domain FY141_13650 PF02743 Cache domain FY141_13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_13655 PF00158 Sigma-54 interaction domain FY141_13655 PF00072 Response regulator receiver domain FY141_13655 PF02954 Bacterial regulatory protein, Fis family FY141_13660 PF03401 Tripartite tricarboxylate transporter family receptor FY141_13665 PF07331 Tripartite tricarboxylate transporter TctB family FY141_13670 PF01970 Tripartite tricarboxylate transporter TctA family FY141_13675 PF04102 SlyX FY141_13685 PF01556 DnaJ C terminal domain FY141_13685 PF00226 DnaJ domain FY141_13685 PF00684 DnaJ central domain FY141_13690 PF00012 Hsp70 protein FY141_13705 PF01625 Peptide methionine sulfoxide reductase FY141_13710 PF02608 ABC transporter substrate-binding protein PnrA-like FY141_13715 PF00005 ABC transporter FY141_13720 PF02653 Branched-chain amino acid transport system / permease component FY141_13725 PF02653 Branched-chain amino acid transport system / permease component FY141_13730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FY141_13735 PF01048 Phosphorylase superfamily FY141_13740 PF01791 DeoC/LacD family aldolase FY141_13745 PF02885 Glycosyl transferase family, helical bundle domain FY141_13745 PF00591 Glycosyl transferase family, a/b domain FY141_13745 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FY141_13760 PF00962 Adenosine/AMP deaminase FY141_13765 PF01676 Metalloenzyme superfamily FY141_13775 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FY141_13780 PF00510 Cytochrome c oxidase subunit III FY141_13785 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY141_13790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY141_13790 PF06481 COX Aromatic Rich Motif FY141_13795 PF00083 Sugar (and other) transporter FY141_13795 PF07690 Major Facilitator Superfamily FY141_13800 PF00310 Glutamine amidotransferases class-II FY141_13800 PF04898 Glutamate synthase central domain FY141_13800 PF01645 Conserved region in glutamate synthase FY141_13800 PF01493 GXGXG motif FY141_13805 PF00667 FAD binding domain FY141_13805 PF00258 Flavodoxin FY141_13805 PF00175 Oxidoreductase NAD-binding domain FY141_13825 PF02801 Beta-ketoacyl synthase, C-terminal domain FY141_13825 PF00109 Beta-ketoacyl synthase, N-terminal domain FY141_13830 PF07977 FabA-like domain FY141_13840 PF03458 UPF0126 domain FY141_13850 PF06912 Protein of unknown function (DUF1275) FY141_13860 PF00528 Binding-protein-dependent transport system inner membrane component FY141_13865 PF00005 ABC transporter FY141_13870 PF00392 Bacterial regulatory proteins, gntR family FY141_13870 PF07702 UTRA domain FY141_13875 PF01618 MotA/TolQ/ExbB proton channel family FY141_13880 PF02472 Biopolymer transport protein ExbD/TolR FY141_13890 PF02615 Malate/L-lactate dehydrogenase FY141_13905 PF00625 Guanylate kinase FY141_13910 PF07969 Amidohydrolase family FY141_13915 PF06299 Protein of unknown function (DUF1045) FY141_13920 PF00528 Binding-protein-dependent transport system inner membrane component FY141_13925 PF00528 Binding-protein-dependent transport system inner membrane component FY141_13935 PF00005 ABC transporter FY141_13945 PF00005 ABC transporter FY141_13950 PF00005 ABC transporter FY141_13955 PF06007 Phosphonate metabolism protein PhnJ FY141_13960 PF05861 Bacterial phosphonate metabolism protein (PhnI) FY141_13965 PF05845 Bacterial phosphonate metabolism protein (PhnH) FY141_13970 PF06754 Phosphonate metabolism protein PhnG FY141_13975 PF00392 Bacterial regulatory proteins, gntR family FY141_13975 PF07702 UTRA domain FY141_13980 PF05173 Dihydrodipicolinate reductase, C-terminus FY141_13980 PF01113 Dihydrodipicolinate reductase, N-terminus FY141_13985 PF02685 Glucokinase FY141_13990 PF02142 MGS-like domain FY141_13995 PF03411 Penicillin-insensitive murein endopeptidase FY141_14000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_14005 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14010 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_14010 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14015 PF00005 ABC transporter FY141_14015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_14020 PF01266 FAD dependent oxidoreductase FY141_14025 PF00120 Glutamine synthetase, catalytic domain FY141_14030 PF01266 FAD dependent oxidoreductase FY141_14040 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14045 PF00005 ABC transporter FY141_14050 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY141_14065 PF02082 Transcriptional regulator FY141_14070 PF13416 Bacterial extracellular solute-binding protein FY141_14080 PF05987 Bacterial protein of unknown function (DUF898) FY141_14085 PF00171 Aldehyde dehydrogenase family FY141_14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_14090 PF03466 LysR substrate binding domain FY141_14095 PF00892 EamA-like transporter family FY141_14110 PF00877 NlpC/P60 family FY141_14120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FY141_14120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FY141_14125 PF00883 Cytosol aminopeptidase family, catalytic domain FY141_14125 PF02789 Cytosol aminopeptidase family, N-terminal domain FY141_14145 PF00437 Type II/IV secretion system protein FY141_14160 PF04972 BON domain FY141_14160 PF00263 Bacterial type II and III secretion system protein FY141_14160 PF13629 Pilus formation protein N terminal region FY141_14200 PF00117 Glutamine amidotransferase class-I FY141_14205 PF07411 Domain of unknown function (DUF1508) FY141_14210 PF01183 Glycosyl hydrolases family 25 FY141_14215 PF00892 EamA-like transporter family FY141_14220 PF00155 Aminotransferase class I and II FY141_14220 PF00392 Bacterial regulatory proteins, gntR family FY141_14235 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_14250 PF00679 Elongation factor G C-terminus FY141_14250 PF00009 Elongation factor Tu GTP binding domain FY141_14250 PF03144 Elongation factor Tu domain 2 FY141_14250 PF06421 GTP-binding protein LepA C-terminus FY141_14255 PF00795 Carbon-nitrogen hydrolase FY141_14285 PF02311 AraC-like ligand binding domain FY141_14285 PF12833 Helix-turn-helix domain FY141_14290 PF03480 Bacterial extracellular solute-binding protein, family 7 FY141_14315 PF00707 Translation initiation factor IF-3, C-terminal domain FY141_14315 PF05198 Translation initiation factor IF-3, N-terminal domain FY141_14320 PF01632 Ribosomal protein L35 FY141_14325 PF00453 Ribosomal protein L20 FY141_14335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FY141_14335 PF01409 tRNA synthetases class II core domain (F) FY141_14340 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FY141_14340 PF03483 B3/4 domain FY141_14340 PF03484 tRNA synthetase B5 domain FY141_14340 PF03147 Ferredoxin-fold anticodon binding domain FY141_14340 PF01588 Putative tRNA binding domain FY141_14345 PF00248 Aldo/keto reductase family FY141_14350 PF03466 LysR substrate binding domain FY141_14350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_14360 PF00248 Aldo/keto reductase family FY141_14365 PF01965 DJ-1/PfpI family FY141_14365 PF12833 Helix-turn-helix domain FY141_14375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_14375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_14390 PF13742 OB-fold nucleic acid binding domain FY141_14390 PF02601 Exonuclease VII, large subunit FY141_14395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_14395 PF13378 Enolase C-terminal domain-like FY141_14400 PF00392 Bacterial regulatory proteins, gntR family FY141_14400 PF07729 FCD domain FY141_14405 PF01047 MarR family FY141_14415 PF02073 Thermophilic metalloprotease (M29) FY141_14420 PF04073 Aminoacyl-tRNA editing domain FY141_14425 PF03960 ArsC family FY141_14440 PF00440 Bacterial regulatory proteins, tetR family FY141_14450 PF00117 Glutamine amidotransferase class-I FY141_14450 PF00958 GMP synthase C terminal domain FY141_14465 PF03073 TspO/MBR family FY141_14490 PF01189 16S rRNA methyltransferase RsmB/F FY141_14490 PF01029 NusB family FY141_14495 PF03330 Lytic transglycolase FY141_14505 PF08331 Domain of unknown function (DUF1730) FY141_14510 PF00043 Glutathione S-transferase, C-terminal domain FY141_14510 PF13417 Glutathione S-transferase, N-terminal domain FY141_14515 PF02673 Bacitracin resistance protein BacA FY141_14530 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FY141_14540 PF13649 Methyltransferase domain FY141_14545 PF00712 DNA polymerase III beta subunit, N-terminal domain FY141_14545 PF02767 DNA polymerase III beta subunit, central domain FY141_14545 PF02768 DNA polymerase III beta subunit, C-terminal domain FY141_14550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_14555 PF02021 Uncharacterised protein family UPF0102 FY141_14560 PF12464 Maltose acetyltransferase FY141_14560 PF14602 Hexapeptide repeat of succinyl-transferase FY141_14565 PF13416 Bacterial extracellular solute-binding protein FY141_14570 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14575 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14580 PF00005 ABC transporter FY141_14590 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY141_14590 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY141_14595 PF01078 Magnesium chelatase, subunit ChlI FY141_14595 PF13335 Magnesium chelatase, subunit ChlI C-terminal FY141_14600 PF00291 Pyridoxal-phosphate dependent enzyme FY141_14605 PF01810 LysE type translocator FY141_14610 PF00692 dUTPase FY141_14615 PF16658 Class II release factor RF3, C-terminal domain FY141_14615 PF03144 Elongation factor Tu domain 2 FY141_14615 PF00009 Elongation factor Tu GTP binding domain FY141_14620 PF02441 Flavoprotein FY141_14620 PF04127 DNA / pantothenate metabolism flavoprotein FY141_14635 PF03109 ABC1 family FY141_14640 PF01209 ubiE/COQ5 methyltransferase family FY141_14645 PF06827 Zinc finger found in FPG and IleRS FY141_14645 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FY141_14645 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FY141_14650 PF00378 Enoyl-CoA hydratase/isomerase FY141_14655 PF01649 Ribosomal protein S20 FY141_14720 PF00005 ABC transporter FY141_14720 PF06472 ABC transporter transmembrane region 2 FY141_14745 PF01261 Xylose isomerase-like TIM barrel FY141_14750 PF00485 Phosphoribulokinase / Uridine kinase family FY141_14755 PF01261 Xylose isomerase-like TIM barrel FY141_14760 PF02653 Branched-chain amino acid transport system / permease component FY141_14765 PF02653 Branched-chain amino acid transport system / permease component FY141_14770 PF00005 ABC transporter FY141_14780 PF00356 Bacterial regulatory proteins, lacI family FY141_14790 PF02954 Bacterial regulatory protein, Fis family FY141_14790 PF00158 Sigma-54 interaction domain FY141_14790 PF01590 GAF domain FY141_14795 PF00107 Zinc-binding dehydrogenase FY141_14795 PF08240 Alcohol dehydrogenase GroES-like domain FY141_14805 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_14810 PF11791 Aconitate B N-terminal domain FY141_14810 PF06434 Aconitate hydratase 2 N-terminus FY141_14810 PF00330 Aconitase family (aconitate hydratase) FY141_14825 PF13954 PapC N-terminal domain FY141_14825 PF00577 Outer membrane usher protein FY141_14825 PF13953 PapC C-terminal domain FY141_14835 PF00005 ABC transporter FY141_14840 PF00005 ABC transporter FY141_14840 PF00664 ABC transporter transmembrane region FY141_14845 PF03401 Tripartite tricarboxylate transporter family receptor FY141_14850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY141_14850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY141_14860 PF05532 CsbD-like FY141_14880 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14885 PF17850 CysA C-terminal regulatory domain FY141_14885 PF00005 ABC transporter FY141_14895 PF00459 Inositol monophosphatase family FY141_14900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_14900 PF00005 ABC transporter FY141_14910 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_14910 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14915 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_14925 PF07729 FCD domain FY141_14925 PF00392 Bacterial regulatory proteins, gntR family FY141_14935 PF13378 Enolase C-terminal domain-like FY141_14935 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_14940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_14940 PF00005 ABC transporter FY141_14945 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_14945 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14950 PF00528 Binding-protein-dependent transport system inner membrane component FY141_14955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_14960 PF00392 Bacterial regulatory proteins, gntR family FY141_14960 PF07729 FCD domain FY141_14965 PF08450 SMP-30/Gluconolactonase/LRE-like region FY141_14970 PF00701 Dihydrodipicolinate synthetase family FY141_14975 PF07690 Major Facilitator Superfamily FY141_14985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY141_14985 PF00384 Molybdopterin oxidoreductase FY141_14985 PF01568 Molydopterin dinucleotide binding domain FY141_14985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FY141_14985 PF00037 4Fe-4S binding domain FY141_14990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FY141_14990 PF00037 4Fe-4S binding domain FY141_14990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FY141_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_15000 PF03466 LysR substrate binding domain FY141_15005 PF01613 Flavin reductase like domain FY141_15010 PF02530 Porin subfamily FY141_15015 PF00990 Diguanylate cyclase, GGDEF domain FY141_15015 PF00563 EAL domain FY141_15015 PF03707 Bacterial signalling protein N terminal repeat FY141_15020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_15020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_15025 PF00005 ABC transporter FY141_15030 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15035 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15040 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_15050 PF00356 Bacterial regulatory proteins, lacI family FY141_15055 PF05544 Proline racemase FY141_15065 PF01266 FAD dependent oxidoreductase FY141_15070 PF00005 ABC transporter FY141_15075 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15080 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15090 PF02615 Malate/L-lactate dehydrogenase FY141_15095 PF00701 Dihydrodipicolinate synthetase family FY141_15100 PF07729 FCD domain FY141_15100 PF00392 Bacterial regulatory proteins, gntR family FY141_15105 PF00091 Tubulin/FtsZ family, GTPase domain FY141_15105 PF12327 FtsZ family, C-terminal domain FY141_15110 PF00072 Response regulator receiver domain FY141_15130 PF00005 ABC transporter FY141_15135 PF13533 Biotin-lipoyl like FY141_15140 PF02056 Family 4 glycosyl hydrolase FY141_15140 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY141_15145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_15145 PF00005 ABC transporter FY141_15150 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15150 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_15155 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_15165 PF02056 Family 4 glycosyl hydrolase FY141_15165 PF11975 Family 4 glycosyl hydrolase C-terminal domain FY141_15190 PF00480 ROK family FY141_15195 PF13416 Bacterial extracellular solute-binding protein FY141_15200 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15205 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15210 PF00206 Lyase FY141_15210 PF14698 Argininosuccinate lyase C-terminal FY141_15215 PF08402 TOBE domain FY141_15215 PF00005 ABC transporter FY141_15220 PF00294 pfkB family carbohydrate kinase FY141_15225 PF00884 Sulfatase FY141_15225 PF12411 Choline sulfatase enzyme C terminal FY141_15230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FY141_15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_15235 PF03466 LysR substrate binding domain FY141_15240 PF00005 ABC transporter FY141_15245 PF01032 FecCD transport family FY141_15250 PF01032 FecCD transport family FY141_15260 PF07715 TonB-dependent Receptor Plug Domain FY141_15260 PF00593 TonB dependent receptor FY141_15265 PF12833 Helix-turn-helix domain FY141_15270 PF00141 Peroxidase FY141_15275 PF03466 LysR substrate binding domain FY141_15275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_15285 PF00512 His Kinase A (phospho-acceptor) domain FY141_15285 PF00672 HAMP domain FY141_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_15290 PF00072 Response regulator receiver domain FY141_15290 PF00486 Transcriptional regulatory protein, C terminal FY141_15295 PF00529 HlyD membrane-fusion protein of T1SS FY141_15295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_15300 PF00873 AcrB/AcrD/AcrF family FY141_15310 PF01865 Protein of unknown function DUF47 FY141_15315 PF01384 Phosphate transporter family FY141_15320 PF02735 Ku70/Ku80 beta-barrel domain FY141_15325 PF01068 ATP dependent DNA ligase domain FY141_15325 PF04679 ATP dependent DNA ligase C terminal region FY141_15325 PF13298 DNA polymerase Ligase (LigD) FY141_15330 PF02735 Ku70/Ku80 beta-barrel domain FY141_15345 PF00563 EAL domain FY141_15345 PF00990 Diguanylate cyclase, GGDEF domain FY141_15345 PF03707 Bacterial signalling protein N terminal repeat FY141_15345 PF13188 PAS domain FY141_15355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_15360 PF03786 D-mannonate dehydratase (UxuA) FY141_15365 PF07729 FCD domain FY141_15365 PF00392 Bacterial regulatory proteins, gntR family FY141_15370 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15375 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15375 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_15380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_15380 PF00005 ABC transporter FY141_15385 PF00005 ABC transporter FY141_15385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_15390 PF03459 TOBE domain FY141_15390 PF17912 MalK OB fold domain FY141_15390 PF00005 ABC transporter FY141_15395 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15400 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15410 PF01571 Aminomethyltransferase folate-binding domain FY141_15410 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY141_15410 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_15410 PF17806 Sarcosine oxidase A3 domain FY141_15415 PF00356 Bacterial regulatory proteins, lacI family FY141_15425 PF00580 UvrD/REP helicase N-terminal domain FY141_15425 PF13361 UvrD-like helicase C-terminal domain FY141_15430 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FY141_15435 PF16363 GDP-mannose 4,6 dehydratase FY141_15440 PF04321 RmlD substrate binding domain FY141_15445 PF00483 Nucleotidyl transferase FY141_15460 PF05045 Rhamnan synthesis protein F FY141_15490 PF01370 NAD dependent epimerase/dehydratase family FY141_15495 PF13580 SIS domain FY141_15500 PF01501 Glycosyl transferase family 8 FY141_15500 PF00535 Glycosyl transferase family 2 FY141_15510 PF03275 UDP-galactopyranose mutase FY141_15515 PF00005 ABC transporter FY141_15515 PF00664 ABC transporter transmembrane region FY141_15525 PF03466 LysR substrate binding domain FY141_15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_15530 PF00248 Aldo/keto reductase family FY141_15545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FY141_15545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FY141_15550 PF11953 Domain of unknown function (DUF3470) FY141_15550 PF00037 4Fe-4S binding domain FY141_15560 PF12852 Cupin FY141_15560 PF12833 Helix-turn-helix domain FY141_15565 PF00106 short chain dehydrogenase FY141_15570 PF03009 Glycerophosphoryl diester phosphodiesterase family FY141_15575 PF00480 ROK family FY141_15575 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY141_15585 PF04773 FecR protein FY141_15585 PF16220 Domain of unknown function (DUF4880) FY141_15590 PF07715 TonB-dependent Receptor Plug Domain FY141_15590 PF00593 TonB dependent receptor FY141_15595 PF07690 Major Facilitator Superfamily FY141_15615 PF07470 Glycosyl Hydrolase Family 88 FY141_15625 PF17912 MalK OB fold domain FY141_15625 PF00005 ABC transporter FY141_15630 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15635 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15640 PF00356 Bacterial regulatory proteins, lacI family FY141_15650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_15650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_15655 PF01261 Xylose isomerase-like TIM barrel FY141_15660 PF13407 Periplasmic binding protein domain FY141_15665 PF13407 Periplasmic binding protein domain FY141_15670 PF00356 Bacterial regulatory proteins, lacI family FY141_15675 PF00108 Thiolase, N-terminal domain FY141_15675 PF02803 Thiolase, C-terminal domain FY141_15680 PF01144 Coenzyme A transferase FY141_15685 PF01144 Coenzyme A transferase FY141_15690 PF01614 Bacterial transcriptional regulator FY141_15690 PF09339 IclR helix-turn-helix domain FY141_15700 PF01494 FAD binding domain FY141_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_15705 PF03466 LysR substrate binding domain FY141_15710 PF00561 alpha/beta hydrolase fold FY141_15715 PF02627 Carboxymuconolactone decarboxylase family FY141_15720 PF00775 Dioxygenase FY141_15720 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FY141_15725 PF00775 Dioxygenase FY141_15730 PF10397 Adenylosuccinate lyase C-terminus FY141_15730 PF00206 Lyase FY141_15735 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15740 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15745 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_15750 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_15755 PF00005 ABC transporter FY141_15760 PF08501 Shikimate dehydrogenase substrate binding domain FY141_15760 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FY141_15765 PF01220 Dehydroquinase class II FY141_15775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_15775 PF01261 Xylose isomerase-like TIM barrel FY141_15790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_15790 PF00005 ABC transporter FY141_15795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_15800 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15805 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_15805 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15820 PF13458 Periplasmic binding protein FY141_15835 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_15835 PF00005 ABC transporter FY141_15840 PF00005 ABC transporter FY141_15850 PF00294 pfkB family carbohydrate kinase FY141_15855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FY141_15855 PF00205 Thiamine pyrophosphate enzyme, central domain FY141_15855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FY141_15860 PF01261 Xylose isomerase-like TIM barrel FY141_15865 PF04962 KduI/IolB family FY141_15870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_15870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_15875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_15875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_15880 PF00356 Bacterial regulatory proteins, lacI family FY141_15885 PF01047 MarR family FY141_15890 PF02633 Creatinine amidohydrolase FY141_15895 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY141_15895 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY141_15915 PF13505 Outer membrane protein beta-barrel domain FY141_15935 PF03824 High-affinity nickel-transport protein FY141_15955 PF01081 KDPG and KHG aldolase FY141_15960 PF01928 CYTH domain FY141_15970 PF00581 Rhodanese-like domain FY141_15970 PF17773 UPF0176 acylphosphatase like domain FY141_15975 PF00990 Diguanylate cyclase, GGDEF domain FY141_15975 PF03707 Bacterial signalling protein N terminal repeat FY141_15975 PF13188 PAS domain FY141_15975 PF00563 EAL domain FY141_15980 PF03180 NLPA lipoprotein FY141_15985 PF00528 Binding-protein-dependent transport system inner membrane component FY141_15990 PF09383 NIL domain FY141_15990 PF00005 ABC transporter FY141_15995 PF00881 Nitroreductase family FY141_16000 PF00232 Glycosyl hydrolase family 1 FY141_16005 PF01261 Xylose isomerase-like TIM barrel FY141_16010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_16010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_16015 PF00356 Bacterial regulatory proteins, lacI family FY141_16015 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FY141_16025 PF07690 Major Facilitator Superfamily FY141_16030 PF13533 Biotin-lipoyl like FY141_16035 PF00440 Bacterial regulatory proteins, tetR family FY141_16040 PF03471 Transporter associated domain FY141_16040 PF03741 Integral membrane protein TerC family FY141_16045 PF03600 Citrate transporter FY141_16045 PF02080 TrkA-C domain FY141_16050 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY141_16055 PF01336 OB-fold nucleic acid binding domain FY141_16055 PF00152 tRNA synthetases class II (D, K and N) FY141_16060 PF01734 Patatin-like phospholipase FY141_16070 PF01297 Zinc-uptake complex component A periplasmic FY141_16075 PF00005 ABC transporter FY141_16080 PF00950 ABC 3 transport family FY141_16085 PF00950 ABC 3 transport family FY141_16100 PF09339 IclR helix-turn-helix domain FY141_16100 PF01614 Bacterial transcriptional regulator FY141_16105 PF00923 Transaldolase/Fructose-6-phosphate aldolase FY141_16110 PF13936 Helix-turn-helix domain FY141_16110 PF04198 Putative sugar-binding domain FY141_16125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FY141_16125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FY141_16135 PF10576 Iron-sulfur binding domain of endonuclease III FY141_16135 PF00730 HhH-GPD superfamily base excision DNA repair protein FY141_16135 PF00633 Helix-hairpin-helix motif FY141_16150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_16150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_16155 PF13419 Haloacid dehalogenase-like hydrolase FY141_16160 PF08125 Mannitol dehydrogenase C-terminal domain FY141_16160 PF01232 Mannitol dehydrogenase Rossmann domain FY141_16170 PF08402 TOBE domain FY141_16170 PF00005 ABC transporter FY141_16175 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16180 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16190 PF04198 Putative sugar-binding domain FY141_16195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_16195 PF00005 ABC transporter FY141_16200 PF01546 Peptidase family M20/M25/M40 FY141_16200 PF07687 Peptidase dimerisation domain FY141_16205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_16210 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16215 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_16215 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16225 PF01965 DJ-1/PfpI family FY141_16230 PF01425 Amidase FY141_16235 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16235 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_16240 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_16250 PF03466 LysR substrate binding domain FY141_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_16255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_16255 PF00005 ABC transporter FY141_16260 PF00005 ABC transporter FY141_16260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_16265 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16265 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_16270 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_16280 PF01244 Membrane dipeptidase (Peptidase family M19) FY141_16290 PF07687 Peptidase dimerisation domain FY141_16290 PF01546 Peptidase family M20/M25/M40 FY141_16295 PF07690 Major Facilitator Superfamily FY141_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_16300 PF03466 LysR substrate binding domain FY141_16305 PF13382 Adenine deaminase C-terminal domain FY141_16305 PF01979 Amidohydrolase family FY141_16315 PF08402 TOBE domain FY141_16315 PF00005 ABC transporter FY141_16325 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16335 PF00356 Bacterial regulatory proteins, lacI family FY141_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_16340 PF03466 LysR substrate binding domain FY141_16345 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_16345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_16345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_16350 PF07715 TonB-dependent Receptor Plug Domain FY141_16360 PF00296 Luciferase-like monooxygenase FY141_16365 PF00005 ABC transporter FY141_16370 PF01032 FecCD transport family FY141_16375 PF01032 FecCD transport family FY141_16385 PF08021 Siderophore-interacting FAD-binding domain FY141_16385 PF04954 Siderophore-interacting protein FY141_16395 PF00501 AMP-binding enzyme FY141_16395 PF13193 AMP-binding enzyme C-terminal domain FY141_16395 PF00668 Condensation domain FY141_16395 PF00975 Thioesterase domain FY141_16395 PF00550 Phosphopantetheine attachment site FY141_16400 PF00550 Phosphopantetheine attachment site FY141_16400 PF00668 Condensation domain FY141_16400 PF00501 AMP-binding enzyme FY141_16400 PF00975 Thioesterase domain FY141_16405 PF13193 AMP-binding enzyme C-terminal domain FY141_16405 PF00668 Condensation domain FY141_16405 PF00501 AMP-binding enzyme FY141_16405 PF00550 Phosphopantetheine attachment site FY141_16410 PF00425 chorismate binding enzyme FY141_16415 PF13193 AMP-binding enzyme C-terminal domain FY141_16415 PF00501 AMP-binding enzyme FY141_16420 PF00550 Phosphopantetheine attachment site FY141_16420 PF00857 Isochorismatase family FY141_16430 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FY141_16430 PF01648 4'-phosphopantetheinyl transferase superfamily FY141_16440 PF03264 NapC/NirT cytochrome c family, N-terminal region FY141_16445 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FY141_16450 PF01568 Molydopterin dinucleotide binding domain FY141_16450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY141_16450 PF00384 Molybdopterin oxidoreductase FY141_16465 PF06796 Periplasmic nitrate reductase protein NapE FY141_16475 PF00005 ABC transporter FY141_16500 PF01136 Peptidase family U32 FY141_16510 PF04343 Protein of unknown function, DUF488 FY141_16515 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FY141_16520 PF02441 Flavoprotein FY141_16530 PF00510 Cytochrome c oxidase subunit III FY141_16540 PF00034 Cytochrome c FY141_16545 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY141_16550 PF07728 AAA domain (dynein-related subfamily) FY141_16550 PF08406 CbbQ/NirQ/NorQ C-terminal FY141_16555 PF00092 von Willebrand factor type A domain FY141_16575 PF07732 Multicopper oxidase FY141_16575 PF00394 Multicopper oxidase FY141_16590 PF00034 Cytochrome c FY141_16610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_16610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_16620 PF00356 Bacterial regulatory proteins, lacI family FY141_16625 PF02653 Branched-chain amino acid transport system / permease component FY141_16630 PF02653 Branched-chain amino acid transport system / permease component FY141_16635 PF00005 ABC transporter FY141_16640 PF13407 Periplasmic binding protein domain FY141_16650 PF03466 LysR substrate binding domain FY141_16650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_16665 PF00356 Bacterial regulatory proteins, lacI family FY141_16670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_16670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_16675 PF01261 Xylose isomerase-like TIM barrel FY141_16680 PF13416 Bacterial extracellular solute-binding protein FY141_16685 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16690 PF00528 Binding-protein-dependent transport system inner membrane component FY141_16695 PF03459 TOBE domain FY141_16695 PF00005 ABC transporter FY141_16695 PF17912 MalK OB fold domain FY141_16710 PF03741 Integral membrane protein TerC family FY141_16710 PF03471 Transporter associated domain FY141_16715 PF00356 Bacterial regulatory proteins, lacI family FY141_16730 PF00459 Inositol monophosphatase family FY141_16735 PF13188 PAS domain FY141_16735 PF00990 Diguanylate cyclase, GGDEF domain FY141_16735 PF03707 Bacterial signalling protein N terminal repeat FY141_16735 PF00563 EAL domain FY141_16760 PF04717 Type VI secretion system, phage-baseplate injector FY141_16780 PF10431 C-terminal, D2-small domain, of ClpB protein FY141_16780 PF00004 ATPase family associated with various cellular activities (AAA) FY141_16780 PF07724 AAA domain (Cdc48 subfamily) FY141_16780 PF17871 AAA lid domain FY141_16790 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FY141_16795 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FY141_16815 PF05947 Type VI secretion system, TssF FY141_16830 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FY141_16835 PF00691 OmpA family FY141_16840 PF06761 Intracellular multiplication and human macrophage-killing FY141_16840 PF14331 ImcF-related N-terminal domain FY141_16840 PF06744 Type VI secretion protein IcmF C-terminal FY141_16850 PF07238 PilZ domain FY141_16850 PF00069 Protein kinase domain FY141_16855 PF02563 Polysaccharide biosynthesis/export protein FY141_16865 PF08946 Osmosensory transporter coiled coil FY141_16865 PF00083 Sugar (and other) transporter FY141_16875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_16875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_16880 PF00106 short chain dehydrogenase FY141_16885 PF02653 Branched-chain amino acid transport system / permease component FY141_16890 PF00005 ABC transporter FY141_16895 PF13407 Periplasmic binding protein domain FY141_16900 PF12833 Helix-turn-helix domain FY141_16905 PF00107 Zinc-binding dehydrogenase FY141_16905 PF08240 Alcohol dehydrogenase GroES-like domain FY141_16920 PF00005 ABC transporter FY141_16930 PF00245 Alkaline phosphatase FY141_16935 PF00440 Bacterial regulatory proteins, tetR family FY141_16950 PF00551 Formyl transferase FY141_16955 PF00464 Serine hydroxymethyltransferase FY141_16965 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY141_16965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_16965 PF17806 Sarcosine oxidase A3 domain FY141_16965 PF01571 Aminomethyltransferase folate-binding domain FY141_16975 PF01266 FAD dependent oxidoreductase FY141_16990 PF00701 Dihydrodipicolinate synthetase family FY141_16995 PF00171 Aldehyde dehydrogenase family FY141_17000 PF01266 FAD dependent oxidoreductase FY141_17010 PF00005 ABC transporter FY141_17010 PF00571 CBS domain FY141_17015 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17020 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17025 PF05544 Proline racemase FY141_17030 PF03807 NADP oxidoreductase coenzyme F420-dependent FY141_17030 PF14748 Pyrroline-5-carboxylate reductase dimerisation FY141_17040 PF00970 Oxidoreductase FAD-binding domain FY141_17040 PF00111 2Fe-2S iron-sulfur cluster binding domain FY141_17040 PF00175 Oxidoreductase NAD-binding domain FY141_17045 PF00355 Rieske [2Fe-2S] domain FY141_17045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FY141_17065 PF01638 HxlR-like helix-turn-helix FY141_17070 PF00107 Zinc-binding dehydrogenase FY141_17070 PF08240 Alcohol dehydrogenase GroES-like domain FY141_17075 PF13382 Adenine deaminase C-terminal domain FY141_17075 PF01979 Amidohydrolase family FY141_17090 PF00005 ABC transporter FY141_17115 PF07690 Major Facilitator Superfamily FY141_17125 PF01979 Amidohydrolase family FY141_17130 PF11799 impB/mucB/samB family C-terminal domain FY141_17130 PF00817 impB/mucB/samB family FY141_17150 PF17912 MalK OB fold domain FY141_17150 PF00005 ABC transporter FY141_17155 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17160 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17185 PF00455 DeoR C terminal sensor domain FY141_17185 PF08220 DeoR-like helix-turn-helix domain FY141_17190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_17190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_17195 PF00005 ABC transporter FY141_17200 PF02653 Branched-chain amino acid transport system / permease component FY141_17205 PF13407 Periplasmic binding protein domain FY141_17210 PF00480 ROK family FY141_17210 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY141_17220 PF01177 Asp/Glu/Hydantoin racemase FY141_17225 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17230 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17240 PF00005 ABC transporter FY141_17240 PF08402 TOBE domain FY141_17260 PF00196 Bacterial regulatory proteins, luxR family FY141_17270 PF00672 HAMP domain FY141_17270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_17270 PF00512 His Kinase A (phospho-acceptor) domain FY141_17275 PF00486 Transcriptional regulatory protein, C terminal FY141_17275 PF00072 Response regulator receiver domain FY141_17295 PF02687 FtsX-like permease family FY141_17295 PF00005 ABC transporter FY141_17295 PF12704 MacB-like periplasmic core domain FY141_17305 PF03466 LysR substrate binding domain FY141_17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_17315 PF00510 Cytochrome c oxidase subunit III FY141_17320 PF00510 Cytochrome c oxidase subunit III FY141_17325 PF00115 Cytochrome C and Quinol oxidase polypeptide I FY141_17330 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FY141_17335 PF00034 Cytochrome c FY141_17350 PF02910 Fumarate reductase flavoprotein C-term FY141_17350 PF00890 FAD binding domain FY141_17355 PF05199 GMC oxidoreductase FY141_17355 PF00732 GMC oxidoreductase FY141_17360 PF00732 GMC oxidoreductase FY141_17360 PF05199 GMC oxidoreductase FY141_17365 PF03459 TOBE domain FY141_17365 PF17912 MalK OB fold domain FY141_17365 PF00005 ABC transporter FY141_17370 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17375 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17380 PF01547 Bacterial extracellular solute-binding protein FY141_17385 PF00171 Aldehyde dehydrogenase family FY141_17390 PF00378 Enoyl-CoA hydratase/isomerase FY141_17395 PF01144 Coenzyme A transferase FY141_17400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_17400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_17405 PF00356 Bacterial regulatory proteins, lacI family FY141_17410 PF03928 Haem-degrading FY141_17415 PF07715 TonB-dependent Receptor Plug Domain FY141_17420 PF01497 Periplasmic binding protein FY141_17425 PF01032 FecCD transport family FY141_17430 PF01032 FecCD transport family FY141_17435 PF00005 ABC transporter FY141_17450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_17450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_17455 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_17455 PF04324 BFD-like [2Fe-2S] binding domain FY141_17460 PF04324 BFD-like [2Fe-2S] binding domain FY141_17460 PF01266 FAD dependent oxidoreductase FY141_17465 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17470 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17475 PF00005 ABC transporter FY141_17475 PF08402 TOBE domain FY141_17490 PF00795 Carbon-nitrogen hydrolase FY141_17495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_17495 PF03466 LysR substrate binding domain FY141_17500 PF00857 Isochorismatase family FY141_17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_17505 PF03466 LysR substrate binding domain FY141_17515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_17515 PF03466 LysR substrate binding domain FY141_17520 PF05163 DinB family FY141_17525 PF00293 NUDIX domain FY141_17530 PF02567 Phenazine biosynthesis-like protein FY141_17545 PF00392 Bacterial regulatory proteins, gntR family FY141_17545 PF00155 Aminotransferase class I and II FY141_17555 PF03466 LysR substrate binding domain FY141_17555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_17570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_17575 PF00881 Nitroreductase family FY141_17590 PF01323 DSBA-like thioredoxin domain FY141_17595 PF02913 FAD linked oxidases, C-terminal domain FY141_17595 PF01565 FAD binding domain FY141_17600 PF00384 Molybdopterin oxidoreductase FY141_17600 PF01568 Molydopterin dinucleotide binding domain FY141_17605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_17610 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17615 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17615 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_17620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_17620 PF00005 ABC transporter FY141_17630 PF00296 Luciferase-like monooxygenase FY141_17635 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY141_17640 PF03358 NADPH-dependent FMN reductase FY141_17655 PF01053 Cys/Met metabolism PLP-dependent enzyme FY141_17660 PF01037 Lrp/AsnC ligand binding domain FY141_17665 PF02733 Dak1 domain FY141_17675 PF00106 short chain dehydrogenase FY141_17680 PF02798 Glutathione S-transferase, N-terminal domain FY141_17685 PF00873 AcrB/AcrD/AcrF family FY141_17690 PF13533 Biotin-lipoyl like FY141_17695 PF00440 Bacterial regulatory proteins, tetR family FY141_17700 PF02801 Beta-ketoacyl synthase, C-terminal domain FY141_17700 PF00109 Beta-ketoacyl synthase, N-terminal domain FY141_17705 PF00091 Tubulin/FtsZ family, GTPase domain FY141_17705 PF12327 FtsZ family, C-terminal domain FY141_17720 PF01554 MatE FY141_17740 PF00753 Metallo-beta-lactamase superfamily FY141_17745 PF03466 LysR substrate binding domain FY141_17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_17755 PF01638 HxlR-like helix-turn-helix FY141_17765 PF00005 ABC transporter FY141_17765 PF02687 FtsX-like permease family FY141_17765 PF12704 MacB-like periplasmic core domain FY141_17770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_17775 PF00989 PAS fold FY141_17775 PF00512 His Kinase A (phospho-acceptor) domain FY141_17775 PF11808 Phosphate regulon sensor protein PhoR FY141_17775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_17780 PF00072 Response regulator receiver domain FY141_17780 PF00486 Transcriptional regulatory protein, C terminal FY141_17800 PF03527 RHS protein FY141_17800 PF05593 RHS Repeat FY141_17820 PF04717 Type VI secretion system, phage-baseplate injector FY141_17830 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17830 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_17855 PF13784 Fic/DOC family N-terminal FY141_17855 PF02661 Fic/DOC family FY141_17870 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_17875 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17880 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_17910 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17915 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_17915 PF00528 Binding-protein-dependent transport system inner membrane component FY141_17920 PF00005 ABC transporter FY141_17920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_17925 PF00005 ABC transporter FY141_17925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_17935 PF00890 FAD binding domain FY141_17935 PF02910 Fumarate reductase flavoprotein C-term FY141_17945 PF13407 Periplasmic binding protein domain FY141_17950 PF00005 ABC transporter FY141_17955 PF02653 Branched-chain amino acid transport system / permease component FY141_17970 PF00248 Aldo/keto reductase family FY141_17975 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_17975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY141_17975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_17980 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY141_17980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_17990 PF00296 Luciferase-like monooxygenase FY141_17995 PF02653 Branched-chain amino acid transport system / permease component FY141_18000 PF02653 Branched-chain amino acid transport system / permease component FY141_18005 PF00005 ABC transporter FY141_18015 PF00296 Luciferase-like monooxygenase FY141_18020 PF00005 ABC transporter FY141_18020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_18025 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18025 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_18030 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_18040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_18045 PF00296 Luciferase-like monooxygenase FY141_18055 PF00296 Luciferase-like monooxygenase FY141_18060 PF00296 Luciferase-like monooxygenase FY141_18065 PF00291 Pyridoxal-phosphate dependent enzyme FY141_18090 PF13635 Domain of unknown function (DUF4143) FY141_18090 PF13173 AAA domain FY141_18100 PF01850 PIN domain FY141_18105 PF00701 Dihydrodipicolinate synthetase family FY141_18110 PF00155 Aminotransferase class I and II FY141_18120 PF01968 Hydantoinase/oxoprolinase FY141_18120 PF05378 Hydantoinase/oxoprolinase N-terminal region FY141_18125 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_18130 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18135 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18140 PF00005 ABC transporter FY141_18150 PF07729 FCD domain FY141_18150 PF00392 Bacterial regulatory proteins, gntR family FY141_18170 PF01047 MarR family FY141_18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_18185 PF03466 LysR substrate binding domain FY141_18190 PF00106 short chain dehydrogenase FY141_18210 PF00171 Aldehyde dehydrogenase family FY141_18215 PF00107 Zinc-binding dehydrogenase FY141_18215 PF08240 Alcohol dehydrogenase GroES-like domain FY141_18220 PF03466 LysR substrate binding domain FY141_18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_18240 PF01810 LysE type translocator FY141_18245 PF13581 Histidine kinase-like ATPase domain FY141_18245 PF07536 HWE histidine kinase FY141_18245 PF13426 PAS domain FY141_18270 PF18011 C-terminal domain found in long catalases FY141_18270 PF06628 Catalase-related immune-responsive FY141_18270 PF00199 Catalase FY141_18290 PF00313 'Cold-shock' DNA-binding domain FY141_18320 PF00107 Zinc-binding dehydrogenase FY141_18320 PF08240 Alcohol dehydrogenase GroES-like domain FY141_18325 PF00561 alpha/beta hydrolase fold FY141_18330 PF00106 short chain dehydrogenase FY141_18335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY141_18340 PF00106 short chain dehydrogenase FY141_18345 PF00440 Bacterial regulatory proteins, tetR family FY141_18360 PF01810 LysE type translocator FY141_18370 PF02525 Flavodoxin-like fold FY141_18415 PF10145 Phage-related minor tail protein FY141_18415 PF01551 Peptidase family M23 FY141_18415 PF01464 Transglycosylase SLT domain FY141_18420 PF10431 C-terminal, D2-small domain, of ClpB protein FY141_18420 PF00004 ATPase family associated with various cellular activities (AAA) FY141_18420 PF17871 AAA lid domain FY141_18420 PF07724 AAA domain (Cdc48 subfamily) FY141_18420 PF02861 Clp amino terminal domain, pathogenicity island component FY141_18430 PF05175 Methyltransferase small domain FY141_18430 PF17827 PrmC N-terminal domain FY141_18435 PF03462 PCRF domain FY141_18435 PF00472 RF-1 domain FY141_18440 PF02896 PEP-utilising enzyme, TIM barrel domain FY141_18440 PF00391 PEP-utilising enzyme, mobile domain FY141_18440 PF01590 GAF domain FY141_18440 PF05524 PEP-utilising enzyme, N-terminal FY141_18445 PF00696 Amino acid kinase family FY141_18445 PF01842 ACT domain FY141_18445 PF13840 ACT domain FY141_18450 PF00270 DEAD/DEAH box helicase FY141_18450 PF00271 Helicase conserved C-terminal domain FY141_18455 PF03435 Saccharopine dehydrogenase NADP binding domain FY141_18455 PF16653 Saccharopine dehydrogenase C-terminal domain FY141_18460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY141_18475 PF16363 GDP-mannose 4,6 dehydratase FY141_18485 PF13426 PAS domain FY141_18485 PF07536 HWE histidine kinase FY141_18490 PF13426 PAS domain FY141_18490 PF07536 HWE histidine kinase FY141_18490 PF08447 PAS fold FY141_18495 PF00072 Response regulator receiver domain FY141_18505 PF04542 Sigma-70 region 2 FY141_18505 PF08281 Sigma-70, region 4 FY141_18510 PF01037 Lrp/AsnC ligand binding domain FY141_18515 PF00171 Aldehyde dehydrogenase family FY141_18515 PF14850 DNA-binding domain of Proline dehydrogenase FY141_18515 PF01619 Proline dehydrogenase FY141_18515 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FY141_18520 PF00005 ABC transporter FY141_18525 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18530 PF09084 NMT1/THI5 like FY141_18535 PF00171 Aldehyde dehydrogenase family FY141_18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_18540 PF03466 LysR substrate binding domain FY141_18545 PF13409 Glutathione S-transferase, N-terminal domain FY141_18560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FY141_18560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FY141_18560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FY141_18565 PF16363 GDP-mannose 4,6 dehydratase FY141_18570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FY141_18570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FY141_18590 PF01965 DJ-1/PfpI family FY141_18610 PF01266 FAD dependent oxidoreductase FY141_18610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FY141_18620 PF05974 Domain of unknown function (DUF892) FY141_18625 PF01011 PQQ enzyme repeat FY141_18645 PF00501 AMP-binding enzyme FY141_18645 PF13193 AMP-binding enzyme C-terminal domain FY141_18650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY141_18650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY141_18655 PF05199 GMC oxidoreductase FY141_18655 PF00732 GMC oxidoreductase FY141_18660 PF11862 Domain of unknown function (DUF3382) FY141_18660 PF02653 Branched-chain amino acid transport system / permease component FY141_18665 PF02653 Branched-chain amino acid transport system / permease component FY141_18670 PF00005 ABC transporter FY141_18675 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_18675 PF00005 ABC transporter FY141_18690 PF00296 Luciferase-like monooxygenase FY141_18695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_18695 PF13378 Enolase C-terminal domain-like FY141_18700 PF00392 Bacterial regulatory proteins, gntR family FY141_18700 PF07729 FCD domain FY141_18705 PF01232 Mannitol dehydrogenase Rossmann domain FY141_18705 PF08125 Mannitol dehydrogenase C-terminal domain FY141_18710 PF00005 ABC transporter FY141_18710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_18715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_18715 PF00005 ABC transporter FY141_18720 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_18720 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18725 PF00528 Binding-protein-dependent transport system inner membrane component FY141_18730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_18735 PF00557 Metallopeptidase family M24 FY141_18735 PF01321 Creatinase/Prolidase N-terminal domain FY141_18740 PF00106 short chain dehydrogenase FY141_18770 PF00575 S1 RNA binding domain FY141_18775 PF02224 Cytidylate kinase FY141_18805 PF02445 Quinolinate synthetase A protein FY141_18810 PF00890 FAD binding domain FY141_18810 PF02910 Fumarate reductase flavoprotein C-term FY141_18815 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FY141_18815 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FY141_18835 PF08173 Membrane bound YbgT-like protein FY141_18840 PF02322 Cytochrome bd terminal oxidase subunit II FY141_18845 PF01654 Cytochrome bd terminal oxidase subunit I FY141_18850 PF00005 ABC transporter FY141_18850 PF00664 ABC transporter transmembrane region FY141_18855 PF00664 ABC transporter transmembrane region FY141_18855 PF00005 ABC transporter FY141_18865 PF00107 Zinc-binding dehydrogenase FY141_18865 PF08240 Alcohol dehydrogenase GroES-like domain FY141_18875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY141_18875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY141_18885 PF01037 Lrp/AsnC ligand binding domain FY141_18890 PF01177 Asp/Glu/Hydantoin racemase FY141_18905 PF00343 Carbohydrate phosphorylase FY141_18910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY141_18910 PF02806 Alpha amylase, C-terminal all-beta domain FY141_18910 PF00128 Alpha amylase, catalytic domain FY141_18915 PF00483 Nucleotidyl transferase FY141_18920 PF08323 Starch synthase catalytic domain FY141_18920 PF00534 Glycosyl transferases group 1 FY141_18925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY141_18925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY141_18925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY141_18925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY141_18930 PF18390 Glycogen debranching enzyme C-terminal domain FY141_18930 PF00128 Alpha amylase, catalytic domain FY141_18930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FY141_18935 PF01575 MaoC like domain FY141_18960 PF17806 Sarcosine oxidase A3 domain FY141_18960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_18960 PF08669 Glycine cleavage T-protein C-terminal barrel domain FY141_18960 PF01571 Aminomethyltransferase folate-binding domain FY141_18975 PF01266 FAD dependent oxidoreductase FY141_18980 PF01165 Ribosomal protein S21 FY141_18995 PF11089 Exopolysaccharide production repressor FY141_19000 PF00535 Glycosyl transferase family 2 FY141_19005 PF04230 Polysaccharide pyruvyl transferase FY141_19010 PF00535 Glycosyl transferase family 2 FY141_19015 PF01943 Polysaccharide biosynthesis protein FY141_19020 PF01757 Acyltransferase family FY141_19025 PF00722 Glycosyl hydrolases family 16 FY141_19035 PF00535 Glycosyl transferase family 2 FY141_19040 PF00535 Glycosyl transferase family 2 FY141_19045 PF00535 Glycosyl transferase family 2 FY141_19050 PF00483 Nucleotidyl transferase FY141_19055 PF13807 G-rich domain on putative tyrosine kinase FY141_19055 PF02706 Chain length determinant protein FY141_19055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY141_19060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_19065 PF00072 Response regulator receiver domain FY141_19065 PF13426 PAS domain FY141_19080 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19085 PF00571 CBS domain FY141_19085 PF00005 ABC transporter FY141_19090 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_19090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY141_19095 PF01205 Uncharacterized protein family UPF0029 FY141_19100 PF00849 RNA pseudouridylate synthase FY141_19105 PF04445 Putative SAM-dependent methyltransferase FY141_19115 PF07995 Glucose / Sorbosone dehydrogenase FY141_19125 PF00196 Bacterial regulatory proteins, luxR family FY141_19125 PF00072 Response regulator receiver domain FY141_19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_19130 PF07730 Histidine kinase FY141_19135 PF13407 Periplasmic binding protein domain FY141_19140 PF00005 ABC transporter FY141_19145 PF02653 Branched-chain amino acid transport system / permease component FY141_19155 PF08450 SMP-30/Gluconolactonase/LRE-like region FY141_19160 PF02631 RecX family FY141_19165 PF00034 Cytochrome c FY141_19175 PF00005 ABC transporter FY141_19180 PF01032 FecCD transport family FY141_19190 PF00593 TonB dependent receptor FY141_19190 PF07715 TonB-dependent Receptor Plug Domain FY141_19195 PF03466 LysR substrate binding domain FY141_19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19205 PF08019 Phosphoethanolamine transferase EptA/EptB FY141_19205 PF00884 Sulfatase FY141_19210 PF00072 Response regulator receiver domain FY141_19210 PF00486 Transcriptional regulatory protein, C terminal FY141_19215 PF00512 His Kinase A (phospho-acceptor) domain FY141_19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_19220 PF00083 Sugar (and other) transporter FY141_19225 PF07756 Protein of unknown function (DUF1612) FY141_19225 PF11972 HTH DNA binding domain FY141_19235 PF00211 Adenylate and Guanylate cyclase catalytic domain FY141_19235 PF00672 HAMP domain FY141_19245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_19245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_19250 PF00892 EamA-like transporter family FY141_19255 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY141_19260 PF00491 Arginase family FY141_19275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FY141_19275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FY141_19280 PF00202 Aminotransferase class-III FY141_19290 PF00155 Aminotransferase class I and II FY141_19295 PF06968 Biotin and Thiamin Synthesis associated domain FY141_19295 PF04055 Radical SAM superfamily FY141_19300 PF13673 Acetyltransferase (GNAT) domain FY141_19345 PF01569 PAP2 superfamily FY141_19350 PF00072 Response regulator receiver domain FY141_19350 PF00486 Transcriptional regulatory protein, C terminal FY141_19355 PF00512 His Kinase A (phospho-acceptor) domain FY141_19355 PF00672 HAMP domain FY141_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_19365 PF07690 Major Facilitator Superfamily FY141_19370 PF03466 LysR substrate binding domain FY141_19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19390 PF07969 Amidohydrolase family FY141_19405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19410 PF03466 LysR substrate binding domain FY141_19415 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FY141_19425 PF07690 Major Facilitator Superfamily FY141_19430 PF03466 LysR substrate binding domain FY141_19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19440 PF00535 Glycosyl transferase family 2 FY141_19450 PF03275 UDP-galactopyranose mutase FY141_19460 PF00672 HAMP domain FY141_19460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_19475 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19480 PF00005 ABC transporter FY141_19490 PF04303 PrpF protein FY141_19495 PF03466 LysR substrate binding domain FY141_19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19500 PF01047 MarR family FY141_19530 PF00440 Bacterial regulatory proteins, tetR family FY141_19535 PF02311 AraC-like ligand binding domain FY141_19535 PF12833 Helix-turn-helix domain FY141_19550 PF13533 Biotin-lipoyl like FY141_19565 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19570 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_19580 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19585 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19585 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_19590 PF00005 ABC transporter FY141_19590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_19630 PF01979 Amidohydrolase family FY141_19635 PF01979 Amidohydrolase family FY141_19640 PF00221 Aromatic amino acid lyase FY141_19650 PF17392 Urocanase C-terminal domain FY141_19650 PF17391 Urocanase N-terminal domain FY141_19650 PF01175 Urocanase Rossmann-like domain FY141_19655 PF05962 HutD FY141_19660 PF07364 Metallopeptidase family M81 FY141_19660 PF07171 MlrC C-terminus FY141_19665 PF01168 Alanine racemase, N-terminal domain FY141_19665 PF14031 Putative serine dehydratase domain FY141_19670 PF01042 Endoribonuclease L-PSP FY141_19680 PF13614 AAA domain FY141_19685 PF07506 RepB plasmid partitioning protein FY141_19685 PF02195 ParB-like nuclease domain FY141_19690 PF11800 Replication protein C C-terminal region FY141_19690 PF03428 Replication protein C N-terminal domain FY141_19705 PF06772 Bacterial low temperature requirement A protein (LtrA) FY141_19710 PF00591 Glycosyl transferase family, a/b domain FY141_19710 PF02885 Glycosyl transferase family, helical bundle domain FY141_19715 PF07715 TonB-dependent Receptor Plug Domain FY141_19715 PF00593 TonB dependent receptor FY141_19720 PF00376 MerR family regulatory protein FY141_19720 PF09278 MerR, DNA binding FY141_19725 PF02806 Alpha amylase, C-terminal all-beta domain FY141_19725 PF00128 Alpha amylase, catalytic domain FY141_19730 PF02785 Biotin carboxylase C-terminal domain FY141_19730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_19730 PF00364 Biotin-requiring enzyme FY141_19730 PF00289 Biotin carboxylase, N-terminal domain FY141_19735 PF02682 Carboxyltransferase domain, subdomain C and D FY141_19740 PF07286 Protein of unknown function (DUF1445) FY141_19745 PF03746 LamB/YcsF family FY141_19750 PF01566 Natural resistance-associated macrophage protein FY141_19755 PF00392 Bacterial regulatory proteins, gntR family FY141_19755 PF07729 FCD domain FY141_19760 PF03861 ANTAR domain FY141_19760 PF08376 Nitrate and nitrite sensing FY141_19775 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19780 PF00005 ABC transporter FY141_19785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FY141_19785 PF04324 BFD-like [2Fe-2S] binding domain FY141_19785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FY141_19785 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_19785 PF18267 Rubredoxin NAD+ reductase C-terminal domain FY141_19795 PF00384 Molybdopterin oxidoreductase FY141_19795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FY141_19795 PF04324 BFD-like [2Fe-2S] binding domain FY141_19795 PF01568 Molydopterin dinucleotide binding domain FY141_19800 PF10414 Sirohaem synthase dimerisation region FY141_19800 PF14824 Sirohaem biosynthesis protein central FY141_19800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FY141_19805 PF08220 DeoR-like helix-turn-helix domain FY141_19805 PF00455 DeoR C terminal sensor domain FY141_19810 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY141_19810 PF01266 FAD dependent oxidoreductase FY141_19815 PF00005 ABC transporter FY141_19815 PF17912 MalK OB fold domain FY141_19820 PF00005 ABC transporter FY141_19820 PF17912 MalK OB fold domain FY141_19825 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19830 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_19845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_19850 PF03466 LysR substrate binding domain FY141_19850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19855 PF13593 SBF-like CPA transporter family (DUF4137) FY141_19860 PF00011 Hsp20/alpha crystallin family FY141_19875 PF00459 Inositol monophosphatase family FY141_19885 PF00072 Response regulator receiver domain FY141_19905 PF13407 Periplasmic binding protein domain FY141_19910 PF00005 ABC transporter FY141_19915 PF02653 Branched-chain amino acid transport system / permease component FY141_19925 PF00248 Aldo/keto reductase family FY141_19930 PF01266 FAD dependent oxidoreductase FY141_19930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY141_19935 PF01791 DeoC/LacD family aldolase FY141_19940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FY141_19940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FY141_19945 PF00672 HAMP domain FY141_19945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_19950 PF03466 LysR substrate binding domain FY141_19955 PF00300 Histidine phosphatase superfamily (branch 1) FY141_19955 PF00106 short chain dehydrogenase FY141_19960 PF00155 Aminotransferase class I and II FY141_19965 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19970 PF00528 Binding-protein-dependent transport system inner membrane component FY141_19980 PF08402 TOBE domain FY141_19980 PF00005 ABC transporter FY141_19985 PF03746 LamB/YcsF family FY141_19990 PF02626 Carboxyltransferase domain, subdomain A and B FY141_19995 PF02682 Carboxyltransferase domain, subdomain C and D FY141_20005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_20005 PF00289 Biotin carboxylase, N-terminal domain FY141_20005 PF02785 Biotin carboxylase C-terminal domain FY141_20010 PF00364 Biotin-requiring enzyme FY141_20015 PF00892 EamA-like transporter family FY141_20020 PF00892 EamA-like transporter family FY141_20025 PF03466 LysR substrate binding domain FY141_20025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_20030 PF03401 Tripartite tricarboxylate transporter family receptor FY141_20035 PF03737 Aldolase/RraA FY141_20045 PF01970 Tripartite tricarboxylate transporter TctA family FY141_20050 PF01370 NAD dependent epimerase/dehydratase family FY141_20060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_20060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_20065 PF00106 short chain dehydrogenase FY141_20070 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20075 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20080 PF00005 ABC transporter FY141_20085 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_20090 PF03737 Aldolase/RraA FY141_20095 PF08240 Alcohol dehydrogenase GroES-like domain FY141_20095 PF00107 Zinc-binding dehydrogenase FY141_20110 PF01070 FMN-dependent dehydrogenase FY141_20115 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FY141_20115 PF14602 Hexapeptide repeat of succinyl-transferase FY141_20115 PF00132 Bacterial transferase hexapeptide (six repeats) FY141_20125 PF01547 Bacterial extracellular solute-binding protein FY141_20135 PF00005 ABC transporter FY141_20135 PF03459 TOBE domain FY141_20135 PF17912 MalK OB fold domain FY141_20140 PF07470 Glycosyl Hydrolase Family 88 FY141_20145 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20150 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20165 PF07729 FCD domain FY141_20165 PF00392 Bacterial regulatory proteins, gntR family FY141_20170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_20170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_20175 PF00005 ABC transporter FY141_20175 PF12848 ABC transporter FY141_20185 PF01841 Transglutaminase-like superfamily FY141_20185 PF08379 Bacterial transglutaminase-like N-terminal region FY141_20190 PF14403 Circularly permuted ATP-grasp type 2 FY141_20190 PF04168 A predicted alpha-helical domain with a conserved ER motif. FY141_20210 PF03061 Thioesterase superfamily FY141_20225 PF00392 Bacterial regulatory proteins, gntR family FY141_20225 PF07729 FCD domain FY141_20230 PF00465 Iron-containing alcohol dehydrogenase FY141_20235 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FY141_20245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_20250 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20255 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20255 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_20260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_20260 PF00005 ABC transporter FY141_20265 PF00701 Dihydrodipicolinate synthetase family FY141_20300 PF00145 C-5 cytosine-specific DNA methylase FY141_20310 PF02796 Helix-turn-helix domain of resolvase FY141_20310 PF00239 Resolvase, N terminal domain FY141_20330 PF01261 Xylose isomerase-like TIM barrel FY141_20335 PF01261 Xylose isomerase-like TIM barrel FY141_20340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_20340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_20345 PF01261 Xylose isomerase-like TIM barrel FY141_20350 PF00005 ABC transporter FY141_20355 PF02653 Branched-chain amino acid transport system / permease component FY141_20365 PF00356 Bacterial regulatory proteins, lacI family FY141_20370 PF00221 Aromatic amino acid lyase FY141_20375 PF00571 CBS domain FY141_20375 PF00005 ABC transporter FY141_20380 PF00528 Binding-protein-dependent transport system inner membrane component FY141_20395 PF07702 UTRA domain FY141_20395 PF00392 Bacterial regulatory proteins, gntR family FY141_20405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_20405 PF00529 HlyD membrane-fusion protein of T1SS FY141_20415 PF00873 AcrB/AcrD/AcrF family FY141_20420 PF07729 FCD domain FY141_20420 PF00392 Bacterial regulatory proteins, gntR family FY141_20425 PF10415 Fumarase C C-terminus FY141_20425 PF00206 Lyase FY141_20430 PF00324 Amino acid permease FY141_20435 PF17763 Glutaminase/Asparaginase C-terminal domain FY141_20435 PF00710 Asparaginase, N-terminal FY141_20445 PF03814 Potassium-transporting ATPase A subunit FY141_20455 PF02669 K+-transporting ATPase, c chain FY141_20460 PF13493 Domain of unknown function (DUF4118) FY141_20460 PF13492 GAF domain FY141_20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_20460 PF00512 His Kinase A (phospho-acceptor) domain FY141_20460 PF02702 Osmosensitive K+ channel His kinase sensor domain FY141_20465 PF00072 Response regulator receiver domain FY141_20465 PF00486 Transcriptional regulatory protein, C terminal FY141_20470 PF01212 Beta-eliminating lyase FY141_20475 PF04898 Glutamate synthase central domain FY141_20475 PF00310 Glutamine amidotransferases class-II FY141_20475 PF01493 GXGXG motif FY141_20475 PF01645 Conserved region in glutamate synthase FY141_20485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FY141_20485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_20490 PF00672 HAMP domain FY141_20490 PF00512 His Kinase A (phospho-acceptor) domain FY141_20490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_20495 PF00072 Response regulator receiver domain FY141_20495 PF00486 Transcriptional regulatory protein, C terminal FY141_20505 PF13406 Transglycosylase SLT domain FY141_20510 PF00483 Nucleotidyl transferase FY141_20525 PF00571 CBS domain FY141_20525 PF01380 SIS domain FY141_20535 PF01145 SPFH domain / Band 7 family FY141_20535 PF16200 C-terminal region of band_7 FY141_20540 PF00762 Ferrochelatase FY141_20545 PF00149 Calcineurin-like phosphoesterase FY141_20545 PF02872 5'-nucleotidase, C-terminal domain FY141_20555 PF16653 Saccharopine dehydrogenase C-terminal domain FY141_20555 PF03435 Saccharopine dehydrogenase NADP binding domain FY141_20560 PF00990 Diguanylate cyclase, GGDEF domain FY141_20565 PF01063 Amino-transferase class IV FY141_20570 PF01432 Peptidase family M3 FY141_20570 PF08439 Oligopeptidase F FY141_20575 PF02954 Bacterial regulatory protein, Fis family FY141_20575 PF00158 Sigma-54 interaction domain FY141_20575 PF00072 Response regulator receiver domain FY141_20580 PF05951 Bacterial protein of unknown function (DUF882) FY141_20585 PF00224 Pyruvate kinase, barrel domain FY141_20585 PF02887 Pyruvate kinase, alpha/beta domain FY141_20605 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FY141_20615 PF00444 Ribosomal protein L36 FY141_20620 PF02222 ATP-grasp domain FY141_20620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FY141_20625 PF00731 AIR carboxylase FY141_20655 PF00459 Inositol monophosphatase family FY141_20665 PF01389 OmpA-like transmembrane domain FY141_20665 PF00691 OmpA family FY141_20670 PF00890 FAD binding domain FY141_20675 PF00005 ABC transporter FY141_20675 PF00664 ABC transporter transmembrane region FY141_20680 PF01197 Ribosomal protein L31 FY141_20700 PF00274 Fructose-bisphosphate aldolase class-I FY141_20705 PF00162 Phosphoglycerate kinase FY141_20710 PF03471 Transporter associated domain FY141_20710 PF00999 Sodium/hydrogen exchanger family FY141_20720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FY141_20720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FY141_20725 PF02779 Transketolase, pyrimidine binding domain FY141_20725 PF02780 Transketolase, C-terminal domain FY141_20725 PF00456 Transketolase, thiamine diphosphate binding domain FY141_20745 PF01595 Cyclin M transmembrane N-terminal domain FY141_20745 PF03471 Transporter associated domain FY141_20745 PF00571 CBS domain FY141_20755 PF13277 YmdB-like protein FY141_20770 PF01709 Transcriptional regulator FY141_20775 PF00296 Luciferase-like monooxygenase FY141_20780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_20780 PF00672 HAMP domain FY141_20785 PF02075 Crossover junction endodeoxyribonuclease RuvC FY141_20790 PF07499 RuvA, C-terminal domain FY141_20790 PF01330 RuvA N terminal domain FY141_20795 PF17864 RuvB AAA lid domain FY141_20795 PF05491 RuvB C-terminal winged helix domain FY141_20795 PF05496 Holliday junction DNA helicase RuvB P-loop domain FY141_20810 PF00293 NUDIX domain FY141_20815 PF00293 NUDIX domain FY141_20820 PF03061 Thioesterase superfamily FY141_20825 PF01618 MotA/TolQ/ExbB proton channel family FY141_20830 PF02472 Biopolymer transport protein ExbD/TolR FY141_20840 PF07676 WD40-like Beta Propeller Repeat FY141_20840 PF04052 TolB amino-terminal domain FY141_20845 PF00691 OmpA family FY141_20855 PF01171 PP-loop family FY141_20860 PF00004 ATPase family associated with various cellular activities (AAA) FY141_20860 PF17862 AAA+ lid domain FY141_20860 PF06480 FtsH Extracellular FY141_20860 PF01434 Peptidase family M41 FY141_20865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FY141_20865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FY141_20865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FY141_20865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FY141_20870 PF13505 Outer membrane protein beta-barrel domain FY141_20880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_20880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_20880 PF01842 ACT domain FY141_20915 PF00085 Thioredoxin FY141_20925 PF03966 Trm112p-like protein FY141_20930 PF01835 MG2 domain FY141_20930 PF17962 Bacterial macroglobulin domain 6 FY141_20930 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FY141_20930 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FY141_20930 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FY141_20930 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FY141_20930 PF07703 Alpha-2-macroglobulin bait region domain FY141_20930 PF00207 Alpha-2-macroglobulin family FY141_20930 PF07678 A-macroglobulin TED domain FY141_20935 PF00912 Transglycosylase FY141_20935 PF00905 Penicillin binding protein transpeptidase domain FY141_20935 PF06832 Penicillin-Binding Protein C-terminus Family FY141_20945 PF01546 Peptidase family M20/M25/M40 FY141_20945 PF07687 Peptidase dimerisation domain FY141_20950 PF00768 D-alanyl-D-alanine carboxypeptidase FY141_20950 PF07943 Penicillin-binding protein 5, C-terminal domain FY141_20955 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY141_20955 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY141_20960 PF01206 Sulfurtransferase TusA FY141_20960 PF00581 Rhodanese-like domain FY141_20965 PF03734 L,D-transpeptidase catalytic domain FY141_20970 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FY141_20975 PF00589 Phage integrase family FY141_20975 PF02899 Phage integrase, N-terminal SAM-like domain FY141_20985 PF01202 Shikimate kinase FY141_20990 PF01761 3-dehydroquinate synthase FY141_21000 PF01722 BolA-like protein FY141_21005 PF00226 DnaJ domain FY141_21010 PF08406 CbbQ/NirQ/NorQ C-terminal FY141_21010 PF07728 AAA domain (dynein-related subfamily) FY141_21010 PF12556 Cobaltochelatase CobS subunit N terminal FY141_21015 PF11775 Cobalamin biosynthesis protein CobT VWA domain FY141_21015 PF06213 Cobalamin biosynthesis protein CobT FY141_21030 PF02592 Putative vitamin uptake transporter FY141_21035 PF00830 Ribosomal L28 family FY141_21055 PF16123 Hydroxyacylglutathione hydrolase C-terminus FY141_21055 PF00753 Metallo-beta-lactamase superfamily FY141_21060 PF01209 ubiE/COQ5 methyltransferase family FY141_21065 PF00155 Aminotransferase class I and II FY141_21070 PF02153 Prephenate dehydrogenase FY141_21080 PF04752 ChaC-like protein FY141_21100 PF00005 ABC transporter FY141_21110 PF00156 Phosphoribosyl transferase domain FY141_21115 PF00072 Response regulator receiver domain FY141_21125 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY141_21125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY141_21135 PF00206 Lyase FY141_21135 PF14698 Argininosuccinate lyase C-terminal FY141_21140 PF08534 Redoxin FY141_21150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FY141_21150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FY141_21155 PF00766 Electron transfer flavoprotein FAD-binding domain FY141_21155 PF01012 Electron transfer flavoprotein domain FY141_21160 PF01012 Electron transfer flavoprotein domain FY141_21170 PF01923 Cobalamin adenosyltransferase FY141_21180 PF00106 short chain dehydrogenase FY141_21190 PF00749 tRNA synthetases class I (E and Q), catalytic domain FY141_21195 PF02805 Metal binding domain of Ada FY141_21195 PF12833 Helix-turn-helix domain FY141_21195 PF00730 HhH-GPD superfamily base excision DNA repair protein FY141_21195 PF06029 AlkA N-terminal domain FY141_21200 PF01381 Helix-turn-helix FY141_21200 PF06114 IrrE N-terminal-like domain FY141_21200 PF09856 Predicted transcriptional regulator (DUF2083) FY141_21205 PF01039 Carboxyl transferase domain FY141_21210 PF02798 Glutathione S-transferase, N-terminal domain FY141_21225 PF00289 Biotin carboxylase, N-terminal domain FY141_21225 PF00364 Biotin-requiring enzyme FY141_21225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_21225 PF02785 Biotin carboxylase C-terminal domain FY141_21225 PF18140 Propionyl-coenzyme A carboxylase BT domain FY141_21230 PF02310 B12 binding domain FY141_21230 PF01642 Methylmalonyl-CoA mutase FY141_21240 PF01266 FAD dependent oxidoreductase FY141_21240 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FY141_21250 PF13407 Periplasmic binding protein domain FY141_21255 PF02653 Branched-chain amino acid transport system / permease component FY141_21260 PF00005 ABC transporter FY141_21265 PF08267 Cobalamin-independent synthase, N-terminal domain FY141_21265 PF01717 Cobalamin-independent synthase, Catalytic domain FY141_21275 PF01381 Helix-turn-helix FY141_21290 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FY141_21315 PF01047 MarR family FY141_21315 PF00480 ROK family FY141_21325 PF00528 Binding-protein-dependent transport system inner membrane component FY141_21330 PF00528 Binding-protein-dependent transport system inner membrane component FY141_21335 PF17912 MalK OB fold domain FY141_21335 PF00005 ABC transporter FY141_21335 PF03459 TOBE domain FY141_21340 PF03009 Glycerophosphoryl diester phosphodiesterase family FY141_21350 PF00722 Glycosyl hydrolases family 16 FY141_21350 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) FY141_21355 PF01272 Transcription elongation factor, GreA/GreB, C-term FY141_21355 PF03449 Transcription elongation factor, N-terminal FY141_21370 PF00534 Glycosyl transferases group 1 FY141_21370 PF13439 Glycosyltransferase Family 4 FY141_21375 PF00534 Glycosyl transferases group 1 FY141_21375 PF13439 Glycosyltransferase Family 4 FY141_21395 PF13807 G-rich domain on putative tyrosine kinase FY141_21395 PF02706 Chain length determinant protein FY141_21395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY141_21405 PF01757 Acyltransferase family FY141_21420 PF01943 Polysaccharide biosynthesis protein FY141_21480 PF01757 Acyltransferase family FY141_21485 PF00892 EamA-like transporter family FY141_21490 PF01043 SecA preprotein cross-linking domain FY141_21490 PF02810 SEC-C motif FY141_21490 PF07517 SecA DEAD-like domain FY141_21490 PF07516 SecA Wing and Scaffold domain FY141_21500 PF01960 ArgJ family FY141_21505 PF13508 Acetyltransferase (GNAT) domain FY141_21505 PF00583 Acetyltransferase (GNAT) family FY141_21510 PF00293 NUDIX domain FY141_21525 PF08241 Methyltransferase domain FY141_21535 PF00462 Glutaredoxin FY141_21540 PF00795 Carbon-nitrogen hydrolase FY141_21550 PF08241 Methyltransferase domain FY141_21565 PF00378 Enoyl-CoA hydratase/isomerase FY141_21575 PF00528 Binding-protein-dependent transport system inner membrane component FY141_21580 PF00528 Binding-protein-dependent transport system inner membrane component FY141_21585 PF00005 ABC transporter FY141_21590 PF08713 DNA alkylation repair enzyme FY141_21595 PF00171 Aldehyde dehydrogenase family FY141_21605 PF08448 PAS fold FY141_21605 PF00563 EAL domain FY141_21605 PF00990 Diguanylate cyclase, GGDEF domain FY141_21605 PF08447 PAS fold FY141_21615 PF00561 alpha/beta hydrolase fold FY141_21625 PF05336 L-rhamnose mutarotase FY141_21630 PF02653 Branched-chain amino acid transport system / permease component FY141_21635 PF02653 Branched-chain amino acid transport system / permease component FY141_21640 PF00005 ABC transporter FY141_21645 PF13407 Periplasmic binding protein domain FY141_21650 PF08220 DeoR-like helix-turn-helix domain FY141_21650 PF00455 DeoR C terminal sensor domain FY141_21655 PF00596 Class II Aldolase and Adducin N-terminal domain FY141_21660 PF01261 Xylose isomerase-like TIM barrel FY141_21665 PF02548 Ketopantoate hydroxymethyltransferase FY141_21670 PF02569 Pantoate-beta-alanine ligase FY141_21680 PF00682 HMGL-like FY141_21685 PF00289 Biotin carboxylase, N-terminal domain FY141_21685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_21685 PF02785 Biotin carboxylase C-terminal domain FY141_21685 PF00364 Biotin-requiring enzyme FY141_21690 PF01039 Carboxyl transferase domain FY141_21695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_21695 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_21695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_21700 PF01037 Lrp/AsnC ligand binding domain FY141_21705 PF02803 Thiolase, C-terminal domain FY141_21705 PF00108 Thiolase, N-terminal domain FY141_21710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_21710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_21710 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_21715 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FY141_21715 PF00676 Dehydrogenase E1 component FY141_21720 PF02780 Transketolase, C-terminal domain FY141_21720 PF02779 Transketolase, pyrimidine binding domain FY141_21725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FY141_21725 PF02817 e3 binding domain FY141_21725 PF00364 Biotin-requiring enzyme FY141_21730 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FY141_21730 PF01676 Metalloenzyme superfamily FY141_21740 PF04143 Sulphur transport FY141_21750 PF04273 Putative phosphatase (DUF442) FY141_21750 PF00753 Metallo-beta-lactamase superfamily FY141_21760 PF00106 short chain dehydrogenase FY141_21765 PF00561 alpha/beta hydrolase fold FY141_21775 PF07729 FCD domain FY141_21775 PF00392 Bacterial regulatory proteins, gntR family FY141_21785 PF00528 Binding-protein-dependent transport system inner membrane component FY141_21790 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_21790 PF00528 Binding-protein-dependent transport system inner membrane component FY141_21795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_21795 PF00005 ABC transporter FY141_21800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_21800 PF00005 ABC transporter FY141_21930 PF04233 Phage Mu protein F like protein FY141_21935 PF06074 Protein of unknown function (DUF935) FY141_21940 PF03237 Terminase-like family FY141_22060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22070 PF13378 Enolase C-terminal domain-like FY141_22070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_22075 PF00106 short chain dehydrogenase FY141_22080 PF01638 HxlR-like helix-turn-helix FY141_22090 PF00296 Luciferase-like monooxygenase FY141_22095 PF00296 Luciferase-like monooxygenase FY141_22105 PF05368 NmrA-like family FY141_22110 PF00296 Luciferase-like monooxygenase FY141_22115 PF01546 Peptidase family M20/M25/M40 FY141_22115 PF07687 Peptidase dimerisation domain FY141_22120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22140 PF00296 Luciferase-like monooxygenase FY141_22145 PF03466 LysR substrate binding domain FY141_22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_22155 PF00248 Aldo/keto reductase family FY141_22160 PF00005 ABC transporter FY141_22160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_22165 PF00005 ABC transporter FY141_22165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_22170 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22175 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_22190 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_22190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_22195 PF00296 Luciferase-like monooxygenase FY141_22205 PF00581 Rhodanese-like domain FY141_22220 PF00296 Luciferase-like monooxygenase FY141_22225 PF01613 Flavin reductase like domain FY141_22235 PF02082 Transcriptional regulator FY141_22240 PF00296 Luciferase-like monooxygenase FY141_22245 PF00296 Luciferase-like monooxygenase FY141_22250 PF07687 Peptidase dimerisation domain FY141_22250 PF01546 Peptidase family M20/M25/M40 FY141_22260 PF00005 ABC transporter FY141_22265 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_22275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_22275 PF03466 LysR substrate binding domain FY141_22285 PF04324 BFD-like [2Fe-2S] binding domain FY141_22285 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_22290 PF01266 FAD dependent oxidoreductase FY141_22295 PF01266 FAD dependent oxidoreductase FY141_22300 PF01037 Lrp/AsnC ligand binding domain FY141_22305 PF00005 ABC transporter FY141_22305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_22310 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22310 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_22315 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22330 PF00202 Aminotransferase class-III FY141_22345 PF01266 FAD dependent oxidoreductase FY141_22350 PF00171 Aldehyde dehydrogenase family FY141_22355 PF00180 Isocitrate/isopropylmalate dehydrogenase FY141_22360 PF00171 Aldehyde dehydrogenase family FY141_22370 PF05378 Hydantoinase/oxoprolinase N-terminal region FY141_22370 PF01968 Hydantoinase/oxoprolinase FY141_22385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_22390 PF01546 Peptidase family M20/M25/M40 FY141_22390 PF07687 Peptidase dimerisation domain FY141_22405 PF01032 FecCD transport family FY141_22410 PF00005 ABC transporter FY141_22415 PF00127 Copper binding proteins, plastocyanin/azurin family FY141_22420 PF01209 ubiE/COQ5 methyltransferase family FY141_22435 PF01032 FecCD transport family FY141_22440 PF00005 ABC transporter FY141_22445 PF04542 Sigma-70 region 2 FY141_22445 PF12680 SnoaL-like domain FY141_22445 PF08281 Sigma-70, region 4 FY141_22465 PF00664 ABC transporter transmembrane region FY141_22465 PF00005 ABC transporter FY141_22470 PF00529 HlyD membrane-fusion protein of T1SS FY141_22470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_22480 PF07729 FCD domain FY141_22480 PF00392 Bacterial regulatory proteins, gntR family FY141_22485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_22485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_22490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_22490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_22495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_22495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_22505 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22510 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22515 PF17912 MalK OB fold domain FY141_22515 PF03459 TOBE domain FY141_22515 PF00005 ABC transporter FY141_22520 PF00920 Dehydratase family FY141_22525 PF01370 NAD dependent epimerase/dehydratase family FY141_22530 PF03737 Aldolase/RraA FY141_22535 PF00072 Response regulator receiver domain FY141_22535 PF00196 Bacterial regulatory proteins, luxR family FY141_22540 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22545 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22545 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_22550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_22550 PF00005 ABC transporter FY141_22565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22580 PF01112 Asparaginase FY141_22585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_22585 PF03466 LysR substrate binding domain FY141_22590 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22595 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_22595 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_22600 PF00005 ABC transporter FY141_22610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_22615 PF01546 Peptidase family M20/M25/M40 FY141_22625 PF13407 Periplasmic binding protein domain FY141_22630 PF00005 ABC transporter FY141_22635 PF02653 Branched-chain amino acid transport system / permease component FY141_22640 PF07722 Peptidase C26 FY141_22645 PF03480 Bacterial extracellular solute-binding protein, family 7 FY141_22650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY141_22655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY141_22670 PF01266 FAD dependent oxidoreductase FY141_22675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_22675 PF13426 PAS domain FY141_22675 PF08447 PAS fold FY141_22680 PF00296 Luciferase-like monooxygenase FY141_22685 PF03972 MmgE/PrpD family FY141_22690 PF00005 ABC transporter FY141_22695 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22700 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22705 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_22710 PF01515 Phosphate acetyl/butaryl transferase FY141_22710 PF03949 Malic enzyme, NAD binding domain FY141_22710 PF00390 Malic enzyme, N-terminal domain FY141_22715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_22715 PF03466 LysR substrate binding domain FY141_22720 PF01011 PQQ enzyme repeat FY141_22725 PF00483 Nucleotidyl transferase FY141_22725 PF01050 Mannose-6-phosphate isomerase FY141_22735 PF01547 Bacterial extracellular solute-binding protein FY141_22740 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22745 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22750 PF00005 ABC transporter FY141_22750 PF17912 MalK OB fold domain FY141_22760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_22760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_22765 PF06508 Queuosine biosynthesis protein QueC FY141_22770 PF01242 6-pyruvoyl tetrahydropterin synthase FY141_22775 PF04055 Radical SAM superfamily FY141_22780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_22780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_22790 PF03459 TOBE domain FY141_22790 PF17912 MalK OB fold domain FY141_22790 PF00005 ABC transporter FY141_22795 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22800 PF00528 Binding-protein-dependent transport system inner membrane component FY141_22805 PF01547 Bacterial extracellular solute-binding protein FY141_22810 PF00356 Bacterial regulatory proteins, lacI family FY141_22825 PF02245 Methylpurine-DNA glycosylase (MPG) FY141_22845 PF17969 L,D-transpeptidase C-terminal domain FY141_22845 PF03734 L,D-transpeptidase catalytic domain FY141_22850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_22850 PF00672 HAMP domain FY141_22855 PF00202 Aminotransferase class-III FY141_22865 PF02397 Bacterial sugar transferase FY141_22870 PF02563 Polysaccharide biosynthesis/export protein FY141_22885 PF00529 HlyD membrane-fusion protein of T1SS FY141_22890 PF00664 ABC transporter transmembrane region FY141_22890 PF00005 ABC transporter FY141_22905 PF00196 Bacterial regulatory proteins, luxR family FY141_22905 PF00072 Response regulator receiver domain FY141_22915 PF01370 NAD dependent epimerase/dehydratase family FY141_22920 PF16363 GDP-mannose 4,6 dehydratase FY141_22950 PF07238 PilZ domain FY141_22950 PF00535 Glycosyl transferase family 2 FY141_22950 PF03552 Cellulose synthase FY141_22960 PF01270 Glycosyl hydrolases family 8 FY141_22970 PF01546 Peptidase family M20/M25/M40 FY141_22970 PF07687 Peptidase dimerisation domain FY141_22985 PF00202 Aminotransferase class-III FY141_22990 PF00375 Sodium:dicarboxylate symporter family FY141_22995 PF02743 Cache domain FY141_22995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_22995 PF00512 His Kinase A (phospho-acceptor) domain FY141_23000 PF02954 Bacterial regulatory protein, Fis family FY141_23000 PF00072 Response regulator receiver domain FY141_23000 PF00158 Sigma-54 interaction domain FY141_23015 PF01266 FAD dependent oxidoreductase FY141_23020 PF00842 Alanine racemase, C-terminal domain FY141_23020 PF01168 Alanine racemase, N-terminal domain FY141_23025 PF01037 Lrp/AsnC ligand binding domain FY141_23030 PF08543 Phosphomethylpyrimidine kinase FY141_23035 PF02581 Thiamine monophosphate synthase FY141_23040 PF02110 Hydroxyethylthiazole kinase family FY141_23045 PF09084 NMT1/THI5 like FY141_23050 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23060 PF01055 Glycosyl hydrolases family 31 FY141_23065 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23070 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23075 PF01547 Bacterial extracellular solute-binding protein FY141_23080 PF00005 ABC transporter FY141_23080 PF08402 TOBE domain FY141_23085 PF00392 Bacterial regulatory proteins, gntR family FY141_23085 PF07702 UTRA domain FY141_23090 PF00296 Luciferase-like monooxygenase FY141_23095 PF00248 Aldo/keto reductase family FY141_23100 PF01613 Flavin reductase like domain FY141_23115 PF00873 AcrB/AcrD/AcrF family FY141_23120 PF13533 Biotin-lipoyl like FY141_23125 PF02563 Polysaccharide biosynthesis/export protein FY141_23130 PF13439 Glycosyltransferase Family 4 FY141_23130 PF00534 Glycosyl transferases group 1 FY141_23135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_23140 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23145 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_23145 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23150 PF01979 Amidohydrolase family FY141_23165 PF03841 L-seryl-tRNA selenium transferase FY141_23170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_23170 PF00005 ABC transporter FY141_23175 PF02798 Glutathione S-transferase, N-terminal domain FY141_23175 PF00043 Glutathione S-transferase, C-terminal domain FY141_23190 PF00296 Luciferase-like monooxygenase FY141_23195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY141_23195 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY141_23200 PF03480 Bacterial extracellular solute-binding protein, family 7 FY141_23210 PF00171 Aldehyde dehydrogenase family FY141_23220 PF03786 D-mannonate dehydratase (UxuA) FY141_23225 PF00107 Zinc-binding dehydrogenase FY141_23225 PF08240 Alcohol dehydrogenase GroES-like domain FY141_23230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY141_23240 PF03480 Bacterial extracellular solute-binding protein, family 7 FY141_23245 PF00392 Bacterial regulatory proteins, gntR family FY141_23245 PF07729 FCD domain FY141_23250 PF13419 Haloacid dehalogenase-like hydrolase FY141_23255 PF03775 Septum formation inhibitor MinC, C-terminal domain FY141_23255 PF05209 Septum formation inhibitor MinC, N-terminal domain FY141_23260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FY141_23265 PF03776 Septum formation topological specificity factor MinE FY141_23270 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_23280 PF08447 PAS fold FY141_23280 PF00990 Diguanylate cyclase, GGDEF domain FY141_23280 PF08448 PAS fold FY141_23280 PF00563 EAL domain FY141_23285 PF01425 Amidase FY141_23295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_23305 PF01547 Bacterial extracellular solute-binding protein FY141_23310 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23315 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23320 PF03459 TOBE domain FY141_23320 PF17912 MalK OB fold domain FY141_23320 PF00005 ABC transporter FY141_23330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_23330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_23340 PF05161 MOFRL family FY141_23340 PF13660 Domain of unknown function (DUF4147) FY141_23360 PF02811 PHP domain FY141_23360 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY141_23360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY141_23360 PF14579 Helix-hairpin-helix motif FY141_23360 PF01336 OB-fold nucleic acid binding domain FY141_23365 PF13847 Methyltransferase domain FY141_23375 PF07690 Major Facilitator Superfamily FY141_23380 PF07729 FCD domain FY141_23380 PF00392 Bacterial regulatory proteins, gntR family FY141_23385 PF02653 Branched-chain amino acid transport system / permease component FY141_23390 PF02653 Branched-chain amino acid transport system / permease component FY141_23395 PF00005 ABC transporter FY141_23400 PF13407 Periplasmic binding protein domain FY141_23405 PF00920 Dehydratase family FY141_23415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_23420 PF12833 Helix-turn-helix domain FY141_23430 PF00266 Aminotransferase class-V FY141_23435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_23435 PF00005 ABC transporter FY141_23440 PF00005 ABC transporter FY141_23440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_23445 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23450 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_23460 PF01580 FtsK/SpoIIIE family FY141_23460 PF09397 Ftsk gamma domain FY141_23460 PF17854 FtsK alpha domain FY141_23460 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FY141_23465 PF02615 Malate/L-lactate dehydrogenase FY141_23470 PF08448 PAS fold FY141_23470 PF08447 PAS fold FY141_23470 PF00990 Diguanylate cyclase, GGDEF domain FY141_23470 PF00563 EAL domain FY141_23480 PF05899 Protein of unknown function (DUF861) FY141_23480 PF07883 Cupin domain FY141_23485 PF00990 Diguanylate cyclase, GGDEF domain FY141_23485 PF17151 Periplasmic sensor domain FY141_23490 PF00529 HlyD membrane-fusion protein of T1SS FY141_23490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_23495 PF00873 AcrB/AcrD/AcrF family FY141_23500 PF00440 Bacterial regulatory proteins, tetR family FY141_23500 PF08361 MAATS-type transcriptional repressor, C-terminal region FY141_23505 PF00005 ABC transporter FY141_23510 PF02653 Branched-chain amino acid transport system / permease component FY141_23515 PF13407 Periplasmic binding protein domain FY141_23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_23520 PF03466 LysR substrate binding domain FY141_23525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY141_23525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FY141_23545 PF03922 OmpW family FY141_23555 PF08402 TOBE domain FY141_23555 PF00005 ABC transporter FY141_23560 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23565 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23570 PF13416 Bacterial extracellular solute-binding protein FY141_23575 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY141_23575 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY141_23590 PF02492 CobW/HypB/UreG, nucleotide-binding domain FY141_23590 PF07683 Cobalamin synthesis protein cobW C-terminal domain FY141_23595 PF00005 ABC transporter FY141_23600 PF00950 ABC 3 transport family FY141_23605 PF01297 Zinc-uptake complex component A periplasmic FY141_23610 PF00583 Acetyltransferase (GNAT) family FY141_23625 PF01053 Cys/Met metabolism PLP-dependent enzyme FY141_23630 PF01547 Bacterial extracellular solute-binding protein FY141_23635 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23640 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23645 PF00005 ABC transporter FY141_23645 PF17912 MalK OB fold domain FY141_23650 PF08402 TOBE domain FY141_23650 PF00005 ABC transporter FY141_23655 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23660 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23665 PF08013 Tagatose 6 phosphate kinase FY141_23670 PF00294 pfkB family carbohydrate kinase FY141_23685 PF08240 Alcohol dehydrogenase GroES-like domain FY141_23685 PF16912 Glucose dehydrogenase C-terminus FY141_23690 PF00356 Bacterial regulatory proteins, lacI family FY141_23695 PF07690 Major Facilitator Superfamily FY141_23700 PF12833 Helix-turn-helix domain FY141_23700 PF02311 AraC-like ligand binding domain FY141_23715 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23720 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23725 PF17912 MalK OB fold domain FY141_23725 PF00005 ABC transporter FY141_23730 PF00248 Aldo/keto reductase family FY141_23745 PF00392 Bacterial regulatory proteins, gntR family FY141_23745 PF07729 FCD domain FY141_23750 PF01370 NAD dependent epimerase/dehydratase family FY141_23755 PF04962 KduI/IolB family FY141_23765 PF00701 Dihydrodipicolinate synthetase family FY141_23770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_23770 PF13378 Enolase C-terminal domain-like FY141_23775 PF04909 Amidohydrolase FY141_23780 PF12833 Helix-turn-helix domain FY141_23780 PF02311 AraC-like ligand binding domain FY141_23785 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23790 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23795 PF00005 ABC transporter FY141_23795 PF08402 TOBE domain FY141_23805 PF00295 Glycosyl hydrolases family 28 FY141_23810 PF07470 Glycosyl Hydrolase Family 88 FY141_23815 PF00550 Phosphopantetheine attachment site FY141_23835 PF01165 Ribosomal protein S21 FY141_23845 PF00313 'Cold-shock' DNA-binding domain FY141_23850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_23850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_23865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_23865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_23870 PF00440 Bacterial regulatory proteins, tetR family FY141_23870 PF17938 Tetracyclin repressor-like, C-terminal domain FY141_23875 PF13416 Bacterial extracellular solute-binding protein FY141_23880 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23885 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23890 PF03459 TOBE domain FY141_23890 PF00005 ABC transporter FY141_23890 PF17912 MalK OB fold domain FY141_23895 PF01261 Xylose isomerase-like TIM barrel FY141_23900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_23900 PF01842 ACT domain FY141_23900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_23910 PF00356 Bacterial regulatory proteins, lacI family FY141_23925 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FY141_23930 PF17912 MalK OB fold domain FY141_23930 PF00005 ABC transporter FY141_23940 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23945 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23950 PF00005 ABC transporter FY141_23955 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23960 PF09084 NMT1/THI5 like FY141_23965 PF00296 Luciferase-like monooxygenase FY141_23975 PF17912 MalK OB fold domain FY141_23975 PF00005 ABC transporter FY141_23980 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23985 PF00528 Binding-protein-dependent transport system inner membrane component FY141_23990 PF13416 Bacterial extracellular solute-binding protein FY141_24000 PF13426 PAS domain FY141_24000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_24000 PF08447 PAS fold FY141_24025 PF08402 TOBE domain FY141_24025 PF00005 ABC transporter FY141_24035 PF00528 Binding-protein-dependent transport system inner membrane component FY141_24040 PF00528 Binding-protein-dependent transport system inner membrane component FY141_24045 PF01177 Asp/Glu/Hydantoin racemase FY141_24085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_24085 PF03466 LysR substrate binding domain FY141_24090 PF00144 Beta-lactamase FY141_24100 PF00860 Permease family FY141_24110 PF07690 Major Facilitator Superfamily FY141_24115 PF16736 Single Cache-like FY141_24115 PF00989 PAS fold FY141_24115 PF00512 His Kinase A (phospho-acceptor) domain FY141_24115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_24120 PF00072 Response regulator receiver domain FY141_24120 PF00486 Transcriptional regulatory protein, C terminal FY141_24125 PF00529 HlyD membrane-fusion protein of T1SS FY141_24125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_24130 PF00873 AcrB/AcrD/AcrF family FY141_24135 PF13460 NAD(P)H-binding FY141_24145 PF01494 FAD binding domain FY141_24150 PF02308 MgtC family FY141_24160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FY141_24165 PF00873 AcrB/AcrD/AcrF family FY141_24170 PF13520 Amino acid permease FY141_24175 PF13520 Amino acid permease FY141_24190 PF01594 AI-2E family transporter FY141_24215 PF01037 Lrp/AsnC ligand binding domain FY141_24240 PF00501 AMP-binding enzyme FY141_24240 PF13193 AMP-binding enzyme C-terminal domain FY141_24250 PF09339 IclR helix-turn-helix domain FY141_24250 PF01614 Bacterial transcriptional regulator FY141_24260 PF03480 Bacterial extracellular solute-binding protein, family 7 FY141_24260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FY141_24265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FY141_24270 PF04199 Putative cyclase FY141_24275 PF01494 FAD binding domain FY141_24290 PF00072 Response regulator receiver domain FY141_24290 PF00196 Bacterial regulatory proteins, luxR family FY141_24295 PF00072 Response regulator receiver domain FY141_24295 PF00196 Bacterial regulatory proteins, luxR family FY141_24300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_24300 PF00512 His Kinase A (phospho-acceptor) domain FY141_24300 PF13426 PAS domain FY141_24300 PF08448 PAS fold FY141_24300 PF00072 Response regulator receiver domain FY141_24305 PF00384 Molybdopterin oxidoreductase FY141_24310 PF00210 Ferritin-like domain FY141_24315 PF00561 alpha/beta hydrolase fold FY141_24325 PF06441 Epoxide hydrolase N terminus FY141_24330 PF00171 Aldehyde dehydrogenase family FY141_24335 PF02566 OsmC-like protein FY141_24340 PF00672 HAMP domain FY141_24340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_24340 PF00512 His Kinase A (phospho-acceptor) domain FY141_24345 PF00072 Response regulator receiver domain FY141_24345 PF00486 Transcriptional regulatory protein, C terminal FY141_24350 PF00561 alpha/beta hydrolase fold FY141_24360 PF00578 AhpC/TSA family FY141_24360 PF02683 Cytochrome C biogenesis protein transmembrane region FY141_24360 PF17991 Thioredoxin like C-terminal domain FY141_24370 PF07690 Major Facilitator Superfamily FY141_24375 PF00990 Diguanylate cyclase, GGDEF domain FY141_24385 PF00005 ABC transporter FY141_24385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_24395 PF00300 Histidine phosphatase superfamily (branch 1) FY141_24395 PF00106 short chain dehydrogenase FY141_24400 PF01266 FAD dependent oxidoreductase FY141_24405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_24410 PF00528 Binding-protein-dependent transport system inner membrane component FY141_24415 PF00528 Binding-protein-dependent transport system inner membrane component FY141_24415 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_24420 PF01266 FAD dependent oxidoreductase FY141_24430 PF13649 Methyltransferase domain FY141_24435 PF00999 Sodium/hydrogen exchanger family FY141_24440 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FY141_24445 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FY141_24450 PF00459 Inositol monophosphatase family FY141_24465 PF01546 Peptidase family M20/M25/M40 FY141_24470 PF08220 DeoR-like helix-turn-helix domain FY141_24470 PF00455 DeoR C terminal sensor domain FY141_24475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_24475 PF00005 ABC transporter FY141_24480 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_24480 PF00528 Binding-protein-dependent transport system inner membrane component FY141_24485 PF00528 Binding-protein-dependent transport system inner membrane component FY141_24490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_24495 PF00465 Iron-containing alcohol dehydrogenase FY141_24500 PF00795 Carbon-nitrogen hydrolase FY141_24505 PF09383 NIL domain FY141_24505 PF00005 ABC transporter FY141_24510 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_24510 PF00005 ABC transporter FY141_24515 PF02653 Branched-chain amino acid transport system / permease component FY141_24520 PF02653 Branched-chain amino acid transport system / permease component FY141_24525 PF13458 Periplasmic binding protein FY141_24545 PF00313 'Cold-shock' DNA-binding domain FY141_24575 PF13289 SIR2-like domain FY141_24585 PF13614 AAA domain FY141_24585 PF00376 MerR family regulatory protein FY141_24590 PF07506 RepB plasmid partitioning protein FY141_24590 PF02195 ParB-like nuclease domain FY141_24595 PF03428 Replication protein C N-terminal domain FY141_24595 PF11800 Replication protein C C-terminal region FY141_24605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_24605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_24610 PF00005 ABC transporter FY141_24615 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_24620 PF00356 Bacterial regulatory proteins, lacI family FY141_24655 PF00487 Fatty acid desaturase FY141_24665 PF00313 'Cold-shock' DNA-binding domain FY141_24705 PF07517 SecA DEAD-like domain FY141_24705 PF07516 SecA Wing and Scaffold domain FY141_24705 PF02810 SEC-C motif FY141_24705 PF01043 SecA preprotein cross-linking domain FY141_24745 PF13091 PLD-like domain FY141_24745 PF13087 AAA domain FY141_24780 PF00512 His Kinase A (phospho-acceptor) domain FY141_24780 PF00989 PAS fold FY141_24780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_24785 PF00664 ABC transporter transmembrane region FY141_24785 PF00005 ABC transporter FY141_24795 PF01022 Bacterial regulatory protein, arsR family FY141_24825 PF12833 Helix-turn-helix domain FY141_24825 PF01965 DJ-1/PfpI family FY141_24830 PF07690 Major Facilitator Superfamily FY141_24835 PF07690 Major Facilitator Superfamily FY141_24840 PF01047 MarR family FY141_24855 PF07690 Major Facilitator Superfamily FY141_24885 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FY141_24890 PF00561 alpha/beta hydrolase fold FY141_24900 PF04752 ChaC-like protein FY141_24905 PF03466 LysR substrate binding domain FY141_24905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_24920 PF00011 Hsp20/alpha crystallin family FY141_24965 PF04956 TrbC/VIRB2 family FY141_24970 PF05101 Type IV secretory pathway, VirB3-like protein FY141_24975 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY141_24980 PF07996 Type IV secretion system proteins FY141_24990 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY141_25000 PF04335 VirB8 protein FY141_25005 PF03524 Conjugal transfer protein FY141_25010 PF03743 Bacterial conjugation TrbI-like protein FY141_25015 PF00437 Type II/IV secretion system protein FY141_25035 PF03230 Antirestriction protein FY141_25115 PF05406 WGR domain FY141_25130 PF02534 Type IV secretory system Conjugative DNA transfer FY141_25145 PF03389 MobA/MobL family FY141_25145 PF17841 BID domain of Bartonella effector protein (Bep) FY141_25145 PF01443 Viral (Superfamily 1) RNA helicase FY141_25155 PF03466 LysR substrate binding domain FY141_25155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_25180 PF00196 Bacterial regulatory proteins, luxR family FY141_25180 PF03472 Autoinducer binding domain FY141_25185 PF00765 Autoinducer synthase FY141_25195 PF00486 Transcriptional regulatory protein, C terminal FY141_25195 PF00072 Response regulator receiver domain FY141_25220 PF00795 Carbon-nitrogen hydrolase FY141_25230 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FY141_25235 PF00005 ABC transporter FY141_25235 PF08402 TOBE domain FY141_25240 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25245 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25260 PF13173 AAA domain FY141_25260 PF13635 Domain of unknown function (DUF4143) FY141_25265 PF02436 Conserved carboxylase domain FY141_25265 PF00682 HMGL-like FY141_25265 PF00289 Biotin carboxylase, N-terminal domain FY141_25265 PF00364 Biotin-requiring enzyme FY141_25265 PF02785 Biotin carboxylase C-terminal domain FY141_25265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FY141_25270 PF14552 Tautomerase enzyme FY141_25275 PF03328 HpcH/HpaI aldolase/citrate lyase family FY141_25280 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY141_25290 PF09339 IclR helix-turn-helix domain FY141_25290 PF01614 Bacterial transcriptional regulator FY141_25300 PF00005 ABC transporter FY141_25305 PF00005 ABC transporter FY141_25315 PF11862 Domain of unknown function (DUF3382) FY141_25315 PF02653 Branched-chain amino acid transport system / permease component FY141_25335 PF00682 HMGL-like FY141_25335 PF08502 LeuA allosteric (dimerisation) domain FY141_25340 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25345 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25350 PF01047 MarR family FY141_25350 PF00480 ROK family FY141_25355 PF00128 Alpha amylase, catalytic domain FY141_25360 PF07687 Peptidase dimerisation domain FY141_25360 PF01546 Peptidase family M20/M25/M40 FY141_25365 PF01261 Xylose isomerase-like TIM barrel FY141_25370 PF17912 MalK OB fold domain FY141_25370 PF00005 ABC transporter FY141_25380 PF00480 ROK family FY141_25385 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25390 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25395 PF01547 Bacterial extracellular solute-binding protein FY141_25400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FY141_25400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FY141_25415 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY141_25430 PF00005 ABC transporter FY141_25435 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25440 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25445 PF00497 Bacterial extracellular solute-binding proteins, family 3 FY141_25450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_25450 PF00005 ABC transporter FY141_25455 PF00005 ABC transporter FY141_25455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_25460 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_25460 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25465 PF00528 Binding-protein-dependent transport system inner membrane component FY141_25470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_25475 PF03737 Aldolase/RraA FY141_25480 PF03466 LysR substrate binding domain FY141_25480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_25485 PF02423 Ornithine cyclodeaminase/mu-crystallin family FY141_25490 PF07687 Peptidase dimerisation domain FY141_25490 PF01546 Peptidase family M20/M25/M40 FY141_25495 PF01156 Inosine-uridine preferring nucleoside hydrolase FY141_25515 PF00857 Isochorismatase family FY141_25530 PF17954 Quercetinase C-terminal cupin domain FY141_25530 PF02678 Pirin FY141_25535 PF03358 NADPH-dependent FMN reductase FY141_25540 PF00561 alpha/beta hydrolase fold FY141_25560 PF13533 Biotin-lipoyl like FY141_25565 PF03466 LysR substrate binding domain FY141_25565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_25570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FY141_25575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_25575 PF03466 LysR substrate binding domain FY141_25590 PF00857 Isochorismatase family FY141_25595 PF03466 LysR substrate binding domain FY141_25595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_25605 PF03551 Transcriptional regulator PadR-like family FY141_25665 PF02653 Branched-chain amino acid transport system / permease component FY141_25670 PF00005 ABC transporter FY141_25675 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_25675 PF00005 ABC transporter FY141_25685 PF14525 AraC-binding-like domain FY141_25685 PF12833 Helix-turn-helix domain FY141_25745 PF00392 Bacterial regulatory proteins, gntR family FY141_25745 PF07729 FCD domain FY141_25750 PF00775 Dioxygenase FY141_25750 PF04444 Catechol dioxygenase N terminus FY141_25755 PF01557 Fumarylacetoacetate (FAA) hydrolase family FY141_25760 PF03328 HpcH/HpaI aldolase/citrate lyase family FY141_25770 PF01571 Aminomethyltransferase folate-binding domain FY141_25775 PF02219 Methylenetetrahydrofolate reductase FY141_25780 PF00551 Formyl transferase FY141_25790 PF00107 Zinc-binding dehydrogenase FY141_25790 PF08240 Alcohol dehydrogenase GroES-like domain FY141_25800 PF12806 Acetyl-CoA dehydrogenase C-terminal like FY141_25800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FY141_25800 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_25800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_25805 PF00378 Enoyl-CoA hydratase/isomerase FY141_25810 PF13193 AMP-binding enzyme C-terminal domain FY141_25810 PF00501 AMP-binding enzyme FY141_25815 PF00171 Aldehyde dehydrogenase family FY141_25820 PF07690 Major Facilitator Superfamily FY141_25835 PF17158 Membrane-associated sensor, integral membrane domain FY141_25835 PF00990 Diguanylate cyclase, GGDEF domain FY141_25855 PF12802 MarR family FY141_25865 PF13458 Periplasmic binding protein FY141_25870 PF02653 Branched-chain amino acid transport system / permease component FY141_25880 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_25880 PF00005 ABC transporter FY141_25885 PF00005 ABC transporter FY141_25895 PF00171 Aldehyde dehydrogenase family FY141_25900 PF01546 Peptidase family M20/M25/M40 FY141_25900 PF07687 Peptidase dimerisation domain FY141_25905 PF00202 Aminotransferase class-III FY141_25910 PF00171 Aldehyde dehydrogenase family FY141_25915 PF08450 SMP-30/Gluconolactonase/LRE-like region FY141_25920 PF01261 Xylose isomerase-like TIM barrel FY141_25925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FY141_25925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FY141_25945 PF01979 Amidohydrolase family FY141_25950 PF00480 ROK family FY141_25950 PF01325 Iron dependent repressor, N-terminal DNA binding domain FY141_25955 PF02653 Branched-chain amino acid transport system / permease component FY141_25960 PF13407 Periplasmic binding protein domain FY141_25965 PF00005 ABC transporter FY141_25985 PF03466 LysR substrate binding domain FY141_25985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_25990 PF07690 Major Facilitator Superfamily FY141_26000 PF00135 Carboxylesterase family FY141_26010 PF00135 Carboxylesterase family FY141_26020 PF00005 ABC transporter FY141_26025 PF02653 Branched-chain amino acid transport system / permease component FY141_26030 PF00135 Carboxylesterase family FY141_26040 PF04303 PrpF protein FY141_26045 PF03737 Aldolase/RraA FY141_26050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FY141_26055 PF02585 GlcNAc-PI de-N-acetylase FY141_26070 PF00005 ABC transporter FY141_26070 PF12399 Branched-chain amino acid ATP-binding cassette transporter FY141_26075 PF00005 ABC transporter FY141_26080 PF13458 Periplasmic binding protein FY141_26090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_26090 PF03466 LysR substrate binding domain FY141_26095 PF01614 Bacterial transcriptional regulator FY141_26095 PF09339 IclR helix-turn-helix domain FY141_26105 PF13378 Enolase C-terminal domain-like FY141_26105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FY141_26115 PF08402 TOBE domain FY141_26115 PF00005 ABC transporter FY141_26120 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26125 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26135 PF07690 Major Facilitator Superfamily FY141_26170 PF03928 Haem-degrading FY141_26190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_26195 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26200 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26200 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_26205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_26205 PF00005 ABC transporter FY141_26215 PF00296 Luciferase-like monooxygenase FY141_26225 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26230 PF00005 ABC transporter FY141_26235 PF00732 GMC oxidoreductase FY141_26235 PF05199 GMC oxidoreductase FY141_26240 PF00171 Aldehyde dehydrogenase family FY141_26255 PF07729 FCD domain FY141_26255 PF00392 Bacterial regulatory proteins, gntR family FY141_26260 PF07992 Pyridine nucleotide-disulphide oxidoreductase FY141_26260 PF04324 BFD-like [2Fe-2S] binding domain FY141_26270 PF01266 FAD dependent oxidoreductase FY141_26280 PF03447 Homoserine dehydrogenase, NAD binding domain FY141_26280 PF01958 Domain of unknown function DUF108 FY141_26285 PF01042 Endoribonuclease L-PSP FY141_26290 PF01548 Transposase FY141_26290 PF02371 Transposase IS116/IS110/IS902 family FY141_26330 PF00857 Isochorismatase family FY141_26340 PF00440 Bacterial regulatory proteins, tetR family FY141_26345 PF00005 ABC transporter FY141_26350 PF01032 FecCD transport family FY141_26355 PF01032 FecCD transport family FY141_26365 PF00394 Multicopper oxidase FY141_26365 PF07731 Multicopper oxidase FY141_26365 PF07732 Multicopper oxidase FY141_26365 PF10518 TAT (twin-arginine translocation) pathway signal sequence FY141_26370 PF00591 Glycosyl transferase family, a/b domain FY141_26370 PF02885 Glycosyl transferase family, helical bundle domain FY141_26375 PF00593 TonB dependent receptor FY141_26375 PF07715 TonB-dependent Receptor Plug Domain FY141_26410 PF03551 Transcriptional regulator PadR-like family FY141_26445 PF07732 Multicopper oxidase FY141_26445 PF00394 Multicopper oxidase FY141_26445 PF07731 Multicopper oxidase FY141_26465 PF01209 ubiE/COQ5 methyltransferase family FY141_26480 PF04079 Segregation and condensation complex subunit ScpB FY141_26490 PF00589 Phage integrase family FY141_26500 PF13614 AAA domain FY141_26505 PF07506 RepB plasmid partitioning protein FY141_26505 PF02195 ParB-like nuclease domain FY141_26510 PF11800 Replication protein C C-terminal region FY141_26510 PF03428 Replication protein C N-terminal domain FY141_26515 PF00239 Resolvase, N terminal domain FY141_26520 PF07756 Protein of unknown function (DUF1612) FY141_26520 PF11972 HTH DNA binding domain FY141_26540 PF08808 RES domain FY141_26560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_26560 PF03466 LysR substrate binding domain FY141_26570 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26575 PF00005 ABC transporter FY141_26580 PF09084 NMT1/THI5 like FY141_26585 PF00296 Luciferase-like monooxygenase FY141_26590 PF00296 Luciferase-like monooxygenase FY141_26600 PF00732 GMC oxidoreductase FY141_26600 PF05199 GMC oxidoreductase FY141_26605 PF00561 alpha/beta hydrolase fold FY141_26625 PF02653 Branched-chain amino acid transport system / permease component FY141_26630 PF00005 ABC transporter FY141_26640 PF00753 Metallo-beta-lactamase superfamily FY141_26645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FY141_26645 PF02770 Acyl-CoA dehydrogenase, middle domain FY141_26645 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FY141_26650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_26655 PF00005 ABC transporter FY141_26655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_26660 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_26660 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26665 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26675 PF00296 Luciferase-like monooxygenase FY141_26680 PF00296 Luciferase-like monooxygenase FY141_26685 PF03466 LysR substrate binding domain FY141_26685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FY141_26695 PF00004 ATPase family associated with various cellular activities (AAA) FY141_26695 PF17862 AAA+ lid domain FY141_26695 PF01434 Peptidase family M41 FY141_26710 PF00664 ABC transporter transmembrane region FY141_26710 PF00005 ABC transporter FY141_26715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_26715 PF00005 ABC transporter FY141_26720 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_26720 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26725 PF00528 Binding-protein-dependent transport system inner membrane component FY141_26730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_26740 PF01261 Xylose isomerase-like TIM barrel FY141_26745 PF00291 Pyridoxal-phosphate dependent enzyme FY141_26750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FY141_26760 PF02195 ParB-like nuclease domain FY141_26770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FY141_26770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FY141_26770 PF01842 ACT domain FY141_26775 PF00483 Nucleotidyl transferase FY141_26780 PF00155 Aminotransferase class I and II FY141_26805 PF04679 ATP dependent DNA ligase C terminal region FY141_26805 PF13298 DNA polymerase Ligase (LigD) FY141_26805 PF01068 ATP dependent DNA ligase domain FY141_26820 PF07733 Bacterial DNA polymerase III alpha NTPase domain FY141_26820 PF14579 Helix-hairpin-helix motif FY141_26820 PF02811 PHP domain FY141_26820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FY141_26840 PF17841 BID domain of Bartonella effector protein (Bep) FY141_26840 PF02661 Fic/DOC family FY141_26865 PF17762 HTH domain found in ParB protein FY141_26865 PF02195 ParB-like nuclease domain FY141_26890 PF08274 PhnA Zinc-Ribbon FY141_26890 PF03831 PhnA domain FY141_26940 PF05284 Protein of unknown function (DUF736) FY141_26945 PF00216 Bacterial DNA-binding protein FY141_26965 PF02534 Type IV secretory system Conjugative DNA transfer FY141_26970 PF06412 Conjugal transfer protein TraD FY141_26975 PF07820 TraC-like protein FY141_26980 PF17841 BID domain of Bartonella effector protein (Bep) FY141_26980 PF03389 MobA/MobL family FY141_26980 PF01443 Viral (Superfamily 1) RNA helicase FY141_26985 PF10502 Signal peptidase, peptidase S26 FY141_26990 PF00795 Carbon-nitrogen hydrolase FY141_26995 PF06871 TraH_2 FY141_27000 PF09228 Prokaryotic Transcriptional repressor TraM FY141_27005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FY141_27005 PF08447 PAS fold FY141_27005 PF13426 PAS domain FY141_27015 PF03472 Autoinducer binding domain FY141_27015 PF00196 Bacterial regulatory proteins, luxR family FY141_27020 PF00128 Alpha amylase, catalytic domain FY141_27025 PF02690 Na+/Pi-cotransporter FY141_27035 PF00455 DeoR C terminal sensor domain FY141_27035 PF08220 DeoR-like helix-turn-helix domain FY141_27040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_27045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_27045 PF00005 ABC transporter FY141_27050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_27050 PF00005 ABC transporter FY141_27055 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27060 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27060 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_27065 PF03009 Glycerophosphoryl diester phosphodiesterase family FY141_27070 PF00459 Inositol monophosphatase family FY141_27095 PF00067 Cytochrome P450 FY141_27100 PF00067 Cytochrome P450 FY141_27115 PF06903 VirK protein FY141_27150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FY141_27150 PF00512 His Kinase A (phospho-acceptor) domain FY141_27155 PF01464 Transglycosylase SLT domain FY141_27160 PF04956 TrbC/VIRB2 family FY141_27165 PF05101 Type IV secretory pathway, VirB3-like protein FY141_27170 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY141_27180 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY141_27185 PF17413 Outer membrane lipoprotein virB7 FY141_27190 PF04335 VirB8 protein FY141_27195 PF03524 Conjugal transfer protein FY141_27200 PF03743 Bacterial conjugation TrbI-like protein FY141_27205 PF00437 Type II/IV secretion system protein FY141_27210 PF00072 Response regulator receiver domain FY141_27210 PF00486 Transcriptional regulatory protein, C terminal FY141_27215 PF07181 VirC2 protein FY141_27220 PF07015 VirC1 protein FY141_27225 PF07328 T-DNA border endonuclease VirD1 FY141_27230 PF03432 Relaxase/Mobilisation nuclease domain FY141_27240 PF02534 Type IV secretory system Conjugative DNA transfer FY141_27260 PF12189 Single-strand DNA-binding protein FY141_27265 PF07229 VirE2 FY141_27285 PF05717 IS66 Orf2 like protein FY141_27290 PF00196 Bacterial regulatory proteins, luxR family FY141_27290 PF03472 Autoinducer binding domain FY141_27305 PF00459 Inositol monophosphatase family FY141_27340 PF02027 RolB/RolC glucosidase family FY141_27345 PF01425 Amidase FY141_27350 PF02027 RolB/RolC glucosidase family FY141_27350 PF01593 Flavin containing amine oxidoreductase FY141_27360 PF02027 RolB/RolC glucosidase family FY141_27365 PF01380 SIS domain FY141_27370 PF00106 short chain dehydrogenase FY141_27370 PF00300 Histidine phosphatase superfamily (branch 1) FY141_27375 PF01321 Creatinase/Prolidase N-terminal domain FY141_27375 PF00557 Metallopeptidase family M24 FY141_27395 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27400 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27405 PF00005 ABC transporter FY141_27405 PF08402 TOBE domain FY141_27435 PF08402 TOBE domain FY141_27435 PF00005 ABC transporter FY141_27440 PF01321 Creatinase/Prolidase N-terminal domain FY141_27440 PF00557 Metallopeptidase family M24 FY141_27445 PF00294 pfkB family carbohydrate kinase FY141_27460 PF00106 short chain dehydrogenase FY141_27465 PF00920 Dehydratase family FY141_27470 PF00248 Aldo/keto reductase family FY141_27485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_27490 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27490 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_27495 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27500 PF00005 ABC transporter FY141_27500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_27505 PF00300 Histidine phosphatase superfamily (branch 1) FY141_27505 PF00106 short chain dehydrogenase FY141_27510 PF01266 FAD dependent oxidoreductase FY141_27515 PF05378 Hydantoinase/oxoprolinase N-terminal region FY141_27515 PF01968 Hydantoinase/oxoprolinase FY141_27530 PF00455 DeoR C terminal sensor domain FY141_27530 PF08220 DeoR-like helix-turn-helix domain FY141_27540 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27545 PF12911 N-terminal TM domain of oligopeptide transport permease C FY141_27545 PF00528 Binding-protein-dependent transport system inner membrane component FY141_27550 PF00005 ABC transporter FY141_27550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FY141_27555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FY141_27565 PF03743 Bacterial conjugation TrbI-like protein FY141_27575 PF03524 Conjugal transfer protein FY141_27580 PF04335 VirB8 protein FY141_27585 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FY141_27590 PF10907 Protein of unknown function (DUF2749) FY141_27600 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FY141_27605 PF05101 Type IV secretory pathway, VirB3-like protein FY141_27610 PF04956 TrbC/VIRB2 family FY141_27615 PF00437 Type II/IV secretion system protein FY141_27620 PF00765 Autoinducer synthase